Citrus Sinensis ID: 021960

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-----
Protein Sequence
MPAQVMPETNLQGIHVLAWDDAPPSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTSRNCVGL
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccEEEEEccccHHHHHHHHHHHHcccEEEEEEccccHHHHHHHHHccccEEEEEcccccHHHHHHHHHHHHHHcccccEEEEccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEcccHHHHccccccHHHHHHHHHHHHHHHHHHHHHcccccEEEcccccccccHHHHHHHHcccccHHHHHHHccccccHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHccccccccccEEEEEcccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccHHHcccccEEcccccccccHcccccEEEEEccccHHHHHHHHHHHHcccEEEEEEccHHHHHHHHHccccccEEEEEEEcccHHHHHHHHHHHHHHHcccEEEEEcccccccccccEcHHHccHHHHHHHHHHHcHHHHHHHHHHHHHHHHHcccEEEEEccHHHccEcccEHHHHHHHHHHHHHHHHHHHHHHHHccEEEEEEEccEccHHHHHHHHcccccHHHHHHHHHccccHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHcHHHccccccEEEEccccccccccccc
Coil and Loop (DISEMBL)
mpaqvmpetnlqgihvlawddappshrrlegkVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLastlapapvtfvhCDVSLEEDIENLINSTVsrygrldilynnagvlgnqrkhksiidfdadefdnVMRVNVKGMALGIKHAARVMINRGGGCIISTASVagvmgglgphaytASKHAIVGLTKNAAcelgrygirvncispFGVATSMLVNAwrnsgdgeeedecmnfgipsqkEVRKMEEFVSglgnlkgttlrSKDIAEAALYLAsdesryvsghnlvvdggvttsrncvgl
Flexible Loop (DISEMBL)
MPAQVMPETNLQGIHVLAWDDAPPSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNagvlgnqrkHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLgnlkgttlrsKDIAEAALYLasdesryvSGHNlvvdggvttsrncvgl
Low Complexity Region (SEG)
MPAQVMPETNLQGIHVLAWDDAPPSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTSRNCVGL
Disordered region (IsUnstruct)
**********LQGIHVLAWDDAPPSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRN**************************FVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT********
Disordered Region (DISOPRED)
*******************************KVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTSRNCVGL
Disordered Region (DISEMBL)
********TNLQGIHVLAWDDAPPSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTSRNCVGL
Disordered Region (DISPRO)
****VMP*T*LQGIHVLAW**APPSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTSRNCVGL
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MPAQVMPETNLQGIHVLAWDDAPPSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTSRNCVGL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	305	2.2.26 [Sep-21-2011]
Q9SCU0	303	Short-chain dehydrogenase	yes	no	0.967	0.973	0.690	1e-113
P50160	336	Sex determination protein	N/A	no	0.921	0.836	0.641	4e-95
F4J2Z7	298	Short-chain dehydrogenase	no	no	0.819	0.838	0.494	7e-66
O80713	257	Short-chain dehydrogenase	no	no	0.819	0.972	0.485	1e-65
F1SWA0	267	Zerumbone synthase OS=Zin	N/A	no	0.855	0.977	0.472	2e-65
Q94K41	257	Short-chain dehydrogenase	no	no	0.832	0.988	0.454	2e-63
F4J300	259	Short-chain dehydrogenase	no	no	0.822	0.969	0.455	4e-61
O80714	258	Short-chain dehydrogenase	no	no	0.809	0.957	0.456	9e-60
Q9C826	285	Xanthoxin dehydrogenase O	no	no	0.852	0.912	0.462	4e-56
Q7FAE1	274	Momilactone A synthase OS	no	no	0.845	0.941	0.471	2e-55

>sp|Q9SCU0|SDR2A_ARATH Short-chain dehydrogenase reductase 2a OS=Arabidopsis thaliana GN=SDR2a PE=3 SV=1

 Score =  409 bits (1051), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 216/313 (69%), Positives = 251/313 (80%), Gaps = 18/313 (5%)

Query: 1   MPAQVMPE-TNLQGIH--VLAWDDAPPSHRRLEGKVAIITGGARGIGEAAVRLFARHGAK 57
           MPAQV+ E T    +H  ++   +     +RLEGKVAIITGGA GIG+A V LFARHGA 
Sbjct: 1   MPAQVIAEQTTFHSVHDTIMEETNTTLYPKRLEGKVAIITGGAHGIGKATVMLFARHGAT 60

Query: 58  VVIADVEDTLGSVLASTLAP---AP-VTFVHCDVSLEEDIENLINSTVSRYGRLDILYNN 113
           VVIADV++  GS LA +L+    +P V F+ CDVS+E D+ENL+N TV+RYGRLDIL+NN
Sbjct: 61  VVIADVDNVAGSSLAKSLSSHKTSPMVAFISCDVSVEADVENLVNVTVARYGRLDILFNN 120

Query: 114 AGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRG-GGCIISTASVAG 172
           AGVLG+Q+KHKSI+DFDADEFD+VMRVNV+G+ LG+KH AR MI RG  GCIISTASVAG
Sbjct: 121 AGVLGDQKKHKSILDFDADEFDHVMRVNVRGVGLGMKHGARAMIKRGFKGCIISTASVAG 180

Query: 173 VMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEE 232
           VMGG+GPHAYTASKHAIVGLTKNAACELG+YGIRVNCISPFGVATSMLVNAWR +  G+ 
Sbjct: 181 VMGGMGPHAYTASKHAIVGLTKNAACELGKYGIRVNCISPFGVATSMLVNAWRKTSGGDV 240

Query: 233 EDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVV 292
                        +V +MEEFV  L NLKG TLR+ DIAEAALYLASDES+YV+GHNLVV
Sbjct: 241 ----------EDDDVEEMEEFVRSLANLKGETLRANDIAEAALYLASDESKYVNGHNLVV 290

Query: 293 DGGVTTSRNCVGL 305
           DGGVTT+RNCVGL
Sbjct: 291 DGGVTTARNCVGL 303

Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: -

>sp|P50160|TS2_MAIZE Sex determination protein tasselseed-2 OS=Zea mays GN=TS2 PE=2 SV=1

 Score =  348 bits (892), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 186/290 (64%), Positives = 223/290 (76%), Gaps = 9/290 (3%)

Query: 24  PSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFV 83
           P  +RL+GKVAI+TGGARGIGEA VRLFA+HGA+VVIAD++D  G  LAS L P  V+FV
Sbjct: 48  PMPKRLDGKVAIVTGGARGIGEAIVRLFAKHGARVVIADIDDAAGEALASALGPQ-VSFV 106

Query: 84  HCDVSLEEDIENLINSTVSRYG-RLDILYNNAGVLGNQ-RKHKSIIDFDADEFDNVMRVN 141
            CDVS+E+D+   ++  +SR+G RLD+  NNAGVLG Q R  +SI+ FDA EFD V+RVN
Sbjct: 107 RCDVSVEDDVRRAVDWALSRHGGRLDVYCNNAGVLGRQTRAARSILSFDAAEFDRVLRVN 166

Query: 142 VKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELG 201
             G ALG+KHAAR M  R  G I+S ASVA V+GGLGPHAYTASKHAIVGLTKNAACEL 
Sbjct: 167 ALGAALGMKHAARAMAPRRAGSIVSVASVAAVLGGLGPHAYTASKHAIVGLTKNAACELR 226

Query: 202 RYGIRVNCISPFGVATSMLVNAWRN------SGDGEEEDECMNFGIPSQKEVRKMEEFVS 255
            +G+RVNC+SPFGVAT ML+NAWR       +    + D  ++  +PS +EV KMEE V 
Sbjct: 227 AHGVRVNCVSPFGVATPMLINAWRQGHDDATADADRDLDLDLDVTVPSDQEVEKMEEVVR 286

Query: 256 GLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTSRNCVGL 305
           GL  LKG TLR +DIAEA L+LASDE+RY+SGHNLVVDGGVTTSRN +GL
Sbjct: 287 GLATLKGPTLRPRDIAEAVLFLASDEARYISGHNLVVDGGVTTSRNLIGL 336

Required for stage-specific floral organ abortion.

Zea mays (taxid: 4577)

>sp|F4J2Z7|SDR4_ARATH Short-chain dehydrogenase reductase 4 OS=Arabidopsis thaliana GN=SDR4 PE=2 SV=1

 Score =  251 bits (640), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 135/273 (49%), Positives = 181/273 (66%), Gaps = 23/273 (8%)

Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVS 88
           L+GK+AIITGGA GIG  AVRLF  HGAKVVI D+++ LG  LA ++     +F  C+V+
Sbjct: 44  LDGKIAIITGGASGIGAEAVRLFTDHGAKVVIVDIQEELGQNLAVSIGLDKASFYRCNVT 103

Query: 89  LEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALG 148
            E D+EN +  TV ++G+LD+L++NAGVL       S++D D + FD  M VNV+G A  
Sbjct: 104 DETDVENAVKFTVEKHGKLDVLFSNAGVL---EAFGSVLDLDLEAFDRTMAVNVRGAAAF 160

Query: 149 IKHAARVMINRGG-GCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRV 207
           IKHAAR M+  G  G I+ T S+A  +GG GPH+YTASKHA++GL ++A   LG+YGIRV
Sbjct: 161 IKHAARSMVASGTRGSIVCTTSIAAEIGGPGPHSYTASKHALLGLIRSACAGLGQYGIRV 220

Query: 208 NCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRS 267
           N ++P+GVAT M       S   EE              V+ +EE+   LGNLKG  L++
Sbjct: 221 NGVAPYGVATGM------TSAYNEE-------------AVKMLEEYGEALGNLKGVVLKA 261

Query: 268 KDIAEAALYLASDESRYVSGHNLVVDGGVTTSR 300
           + IAEAAL+LASD+S Y+SG NLVVDGG +  +
Sbjct: 262 RHIAEAALFLASDDSVYISGQNLVVDGGFSVVK 294

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|O80713|SDR3A_ARATH Short-chain dehydrogenase reductase 3a OS=Arabidopsis thaliana GN=SDR3a PE=2 SV=1

 Score =  249 bits (637), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 133/274 (48%), Positives = 184/274 (67%), Gaps = 24/274 (8%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDV 87
           RL+GK+AIITGGA GIG  AVRLF  HGAKVVI D ++ LG  +A ++     +F  CDV
Sbjct: 5   RLDGKIAIITGGASGIGAEAVRLFTDHGAKVVIVDFQEELGQNVAVSVGKDKASFYRCDV 64

Query: 88  SLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMAL 147
           + E+++EN +  TV +YG+LD+L++NAGV+    +  S +D + ++FD  M VNV+G A 
Sbjct: 65  TNEKEVENAVKFTVEKYGKLDVLFSNAGVM---EQPGSFLDLNLEQFDRTMAVNVRGAAA 121

Query: 148 GIKHAARVMINRGG-GCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIR 206
            IKHAAR M+ +G  G I+ T SVA  +GG GPHAYTASKHA++GL K+A   LG+YGIR
Sbjct: 122 FIKHAARAMVEKGTRGSIVCTTSVASEIGGPGPHAYTASKHALLGLVKSACGGLGKYGIR 181

Query: 207 VNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLR 266
           VN ++P+ VAT++      NS D              ++ VR +EE+ +  G LKG  L+
Sbjct: 182 VNGVAPYAVATAI------NSRD--------------EETVRMVEEYSAATGILKGVVLK 221

Query: 267 SKDIAEAALYLASDESRYVSGHNLVVDGGVTTSR 300
           ++ +AEAAL+LASD+S YVSG NL VDGG +  +
Sbjct: 222 ARHVAEAALFLASDDSAYVSGQNLAVDGGYSVVK 255

Confers resistance to the incompatible pathogenic bacteria P.syringae pv. tomato DC3000 in a PR1-dependent manner. Seems not involved in abscisic acid (ABA) biosynthesis.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|F1SWA0|ZERSY_ZINZE Zerumbone synthase OS=Zingiber zerumbet GN=ZSD1 PE=1 SV=1

 Score =  249 bits (635), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 131/277 (47%), Positives = 180/277 (64%), Gaps = 16/277 (5%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAP-VTFVHCD 86
           RLEGKVA++TGGA GIGE+  RLF  HGAK+ I DV+D LG  ++  L   P   + HCD
Sbjct: 2   RLEGKVALVTGGASGIGESIARLFIEHGAKICIVDVQDELGQQVSQRLGGDPHACYFHCD 61

Query: 87  VSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMA 146
           V++E+D+   ++ T  +YG +DI+ NNAG+ G+  K   I D D +EF  V  +NV G+ 
Sbjct: 62  VTVEDDVRRAVDFTAEKYGTIDIMVNNAGITGD--KVIDIRDADFNEFKKVFDINVNGVF 119

Query: 147 LGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIR 206
           LG+KHAAR+MI +  G I+S ASV+ V+ G GPH YT +KHA+VGLTK+ A ELGR+GIR
Sbjct: 120 LGMKHAARIMIPKMKGSIVSLASVSSVIAGAGPHGYTGAKHAVVGLTKSVAAELGRHGIR 179

Query: 207 VNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLR 266
           VNC+SP+ V T + +     S   E +++ +          R    FV    NLKG  L 
Sbjct: 180 VNCVSPYAVPTRLSMPYLPES---EMQEDAL----------RGFLTFVRSNANLKGVDLM 226

Query: 267 SKDIAEAALYLASDESRYVSGHNLVVDGGVTTSRNCV 303
             D+AEA LYLA++ES+YVSG NLV+DGG + + + +
Sbjct: 227 PNDVAEAVLYLATEESKYVSGLNLVIDGGFSIANHTL 263

Catalyzes 8-hydroxy-alpha-humulene into zerumbone in presence of NAD. Also converts borneol to camphor in vitro. Zerumbone is a highly promising multi-anticancer agent.

Zingiber zerumbet (taxid: 311405)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 2

EC: 6

>sp|Q94K41|SDR3B_ARATH Short-chain dehydrogenase reductase 3b OS=Arabidopsis thaliana GN=SDR3b PE=2 SV=1

 Score =  243 bits (619), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 126/277 (45%), Positives = 178/277 (64%), Gaps = 23/277 (8%)

Query: 25  SHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVH 84
           S +RL+GK+ IITGGA GIG  +VRLF  HGA+VVI DV+D LG  +A ++     ++ H
Sbjct: 2   SGKRLDGKIVIITGGASGIGAESVRLFTEHGARVVIVDVQDELGQNVAVSIGEDKASYYH 61

Query: 85  CDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKG 144
           CDV+ E ++EN +  TV +YG+LD+L++NAGV+       SI+D + +E D  + +N++G
Sbjct: 62  CDVTNETEVENAVKFTVEKYGKLDVLFSNAGVI---EPFVSILDLNLNELDRTIAINLRG 118

Query: 145 MALGIKHAARVMINRG-GGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRY 203
            A  IKHAAR M+ +G  G I+ T SVA  + G  PH YT SKH ++GL K+A+  LG+Y
Sbjct: 119 TAAFIKHAARAMVEKGIRGSIVCTTSVAAEIAGTAPHGYTTSKHGLLGLIKSASGGLGKY 178

Query: 204 GIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGT 263
           GIRVN ++PFGVAT ++ N ++                    E   +E+  S   NLKG 
Sbjct: 179 GIRVNGVAPFGVATPLVCNGFK-------------------MEPNVVEQNTSASANLKGI 219

Query: 264 TLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTSR 300
            L+++ +AEAAL+LASDES YVSG NL VDGG +  +
Sbjct: 220 VLKARHVAEAALFLASDESAYVSGQNLAVDGGYSVVK 256

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|F4J300|SDR5_ARATH Short-chain dehydrogenase reductase 5 OS=Arabidopsis thaliana GN=SDR5 PE=2 SV=1

 Score =  234 bits (598), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 127/279 (45%), Positives = 179/279 (64%), Gaps = 28/279 (10%)

Query: 25  SHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVH 84
           S +RL+GK+ IITGGA GIG  A RLF  HGAKVVI D+++ LG  +A ++     +F  
Sbjct: 2   SGQRLDGKIVIITGGASGIGAEAARLFTDHGAKVVIVDLQEELGQNVAVSIGLDKASFYR 61

Query: 85  CDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKG 144
           CD++ E ++EN +  TV ++G+LD+L++NAGV+     H SI+D D + FD  M VNV+G
Sbjct: 62  CDITDETEVENAVKFTVEKHGKLDVLFSNAGVM---EPHGSILDLDLEAFDRTMAVNVRG 118

Query: 145 MALGIKHAARVMINRGG-GCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRY 203
            A  IKHAAR M+  G  G I+ T SV   +GG GPH+YTASKHA++GL ++A   LG+Y
Sbjct: 119 AAAFIKHAARSMVASGTRGSIVCTTSVTAEIGGPGPHSYTASKHALLGLVRSACGGLGKY 178

Query: 204 GIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKE--VRKMEEFVSGLGNLK 261
           GIRVN ++P+GVAT                      G+ S  E  V+ +E++ S    LK
Sbjct: 179 GIRVNGVAPYGVAT----------------------GLTSYNEETVKMVEDYCSATAILK 216

Query: 262 GTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTSR 300
           G  L+++ +A+AAL+LASD+S Y+SG NL VDGG +  +
Sbjct: 217 GVVLKARHVADAALFLASDDSVYISGQNLGVDGGYSVVK 255

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|O80714|SDR3C_ARATH Short-chain dehydrogenase reductase 3c OS=Arabidopsis thaliana GN=SDR3c PE=3 SV=1

 Score =  230 bits (587), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 126/276 (45%), Positives = 174/276 (63%), Gaps = 29/276 (10%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDV 87
           RLEGK+ IITGGA GIG  A RLF  HGAKVVI DV++ LG  +A  +     +F  CDV
Sbjct: 5   RLEGKIVIITGGASGIGADAARLFTDHGAKVVIVDVQEELGQNVAVLIGKDKASFYRCDV 64

Query: 88  SLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMAL 147
           + E ++E+ +  TV ++G+LD+L++NAGVL      +S +DFD + FD +M VNV+G A 
Sbjct: 65  TNETEVEDAVKFTVEKHGKLDVLFSNAGVL---EPLESFLDFDLERFDRIMAVNVRGAAA 121

Query: 148 GIKHAARVMINRGG-GCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIR 206
            IKHAAR M+ +G  G I+ T SV+  +GG G H YTASKH +VGL ++A  +LG+YGIR
Sbjct: 122 FIKHAARAMVEKGTRGSIVCTTSVSAEIGG-GHHGYTASKHGLVGLIRSACGDLGKYGIR 180

Query: 207 VNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEV--RKMEEFVSGLGNLKGTT 264
           VN ++P+ VAT M                       S  EV  +++E++    G LKG  
Sbjct: 181 VNGVAPYAVATPM----------------------TSHDEVTGKQLEDYFDAKGILKGMV 218

Query: 265 LRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTSR 300
           L++  +A+ AL+LASD+S Y+SG NL VDGG T  +
Sbjct: 219 LKASHVAQVALFLASDDSAYISGQNLAVDGGYTVVK 254

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q9C826|ABA2_ARATH Xanthoxin dehydrogenase OS=Arabidopsis thaliana GN=ABA2 PE=1 SV=1

 Score =  218 bits (556), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 129/279 (46%), Positives = 174/279 (62%), Gaps = 19/279 (6%)

Query: 27  RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL----APAPVTF 82
           +RL GKVA+ITGGA GIGE+ VRLF +HGAKV I D++D LG  +  +L    +     F
Sbjct: 16  QRLLGKVALITGGATGIGESIVRLFHKHGAKVCIVDLQDDLGGEVCKSLLRGESKETAFF 75

Query: 83  VHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNV 142
           +H DV +E+DI N ++  V  +G LDIL NNAG+ G       I ++   EF+    VNV
Sbjct: 76  IHGDVRVEDDISNAVDFAVKNFGTLDILINNAGLCG--APCPDIRNYSLSEFEMTFDVNV 133

Query: 143 KGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGR 202
           KG  L +KHAARVMI    G I+S  SV GV+GG+GPH+Y  SKHA++GLT++ A ELG+
Sbjct: 134 KGAFLSMKHAARVMIPEKKGSIVSLCSVGGVVGGVGPHSYVGSKHAVLGLTRSVAAELGQ 193

Query: 203 YGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKG 262
           +GIRVNC+SP+ VAT + +       +   ED  + F             F +   NLKG
Sbjct: 194 HGIRVNCVSPYAVATKLALAHLPE--EERTEDAFVGF-----------RNFAAANANLKG 240

Query: 263 TTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTSRN 301
             L   D+A A L+LASD+SRY+SG NL++DGG T + +
Sbjct: 241 VELTVDDVANAVLFLASDDSRYISGDNLMIDGGFTCTNH 279

Involved in the biosynthesis of abscisic acid.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 8

EC: 8

>sp|Q7FAE1|MOMAS_ORYSJ Momilactone A synthase OS=Oryza sativa subsp. japonica GN=Os04g0179200 PE=2 SV=1

 Score =  216 bits (550), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 132/280 (47%), Positives = 178/280 (63%), Gaps = 22/280 (7%)

Query: 27  RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCD 86
           R+L GKVA+ITGGA GIG    RLF +HGA+VV+AD++D LG+ L + L P   ++VHCD
Sbjct: 13  RKLVGKVAVITGGASGIGACTARLFVKHGARVVVADIQDELGASLVAELGPDASSYVHCD 72

Query: 87  VSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMA 146
           V+ E D+   ++  V+R+G+LD+++NNAGV G      S  +   ++F+ V+ VN+ G  
Sbjct: 73  VTNEGDVAAAVDHAVARFGKLDVMFNNAGVSGPPCFRMS--ECTKEDFERVLAVNLVGPF 130

Query: 147 LGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIR 206
           LG KHAARVM     G IISTAS++  + G   HAYT SKHA+VG T+NAA ELGR+GIR
Sbjct: 131 LGTKHAARVMAPARRGSIISTASLSSSVSGAASHAYTTSKHALVGFTENAAGELGRHGIR 190

Query: 207 VNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGT-TL 265
           VNC+SP GVAT +   A         +DE              +E  ++   NLKG   L
Sbjct: 191 VNCVSPAGVATPLARAAM------GMDDEA-------------IEAIMANSANLKGAGAL 231

Query: 266 RSKDIAEAALYLASDESRYVSGHNLVVDGGVTTSRNCVGL 305
           ++ DIA AAL+LASD+ RYVSG NL VDGG++   +  G 
Sbjct: 232 KADDIAAAALFLASDDGRYVSGQNLRVDGGLSVVNSSFGF 271

Involved in momilactone phytoalexins biosynthesis. Catalyzes the last step of momilactone A biosynthesis.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 9

EC: 5

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	305
255586274	303	short chain alcohol dehydrogenase, putat	0.993	1.0	0.839	1e-145
225439592	303	PREDICTED: sex determination protein tas	0.990	0.996	0.830	1e-144
224087827	305	predicted protein [Populus trichocarpa]	0.986	0.986	0.786	1e-136
224139278	305	predicted protein [Populus trichocarpa]	0.986	0.986	0.779	1e-136
449439827	308	PREDICTED: short-chain dehydrogenase red	0.993	0.983	0.767	1e-136
297735587	281	unnamed protein product [Vitis vinifera]	0.918	0.996	0.777	1e-131
356532207	301	PREDICTED: sex determination protein tas	0.977	0.990	0.745	1e-126
357506409	302	Sex determination protein tasselseed-2 [	0.977	0.986	0.716	1e-125
356506756	311	PREDICTED: sex determination protein tas	0.990	0.971	0.737	1e-123
356568176	298	PREDICTED: sex determination protein tas	0.967	0.989	0.728	1e-122

>gi|255586274|ref|XP_002533789.1| short chain alcohol dehydrogenase, putative [Ricinus communis] gi|223526278|gb|EEF28591.1| short chain alcohol dehydrogenase, putative [Ricinus communis]

 Score =  521 bits (1343), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 256/305 (83%), Positives = 280/305 (91%), Gaps = 2/305 (0%)

Query: 1   MPAQVMPETNLQGIHVLAWDDAPPSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVI 60
           MPAQVMPE  L GIHVLA ++ PPS RRLEGKVAI+TGGARGIGEA VRLFA+HGAKVVI
Sbjct: 1   MPAQVMPEQTLHGIHVLARENNPPSPRRLEGKVAIVTGGARGIGEATVRLFAKHGAKVVI 60

Query: 61  ADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQ 120
           ADVEDT G++LA++L+P  VTFVHCDVS EEDIENLINSTVS YGRLDIL+NNAG+LGNQ
Sbjct: 61  ADVEDTPGTILANSLSPF-VTFVHCDVSQEEDIENLINSTVSHYGRLDILFNNAGLLGNQ 119

Query: 121 RKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPH 180
            K+KSI++FD DEFD VMRVNVKG+ALGIKHAARVMI RG GCIISTASVAGVMGGLGPH
Sbjct: 120 PKNKSILEFDVDEFDRVMRVNVKGVALGIKHAARVMIPRGVGCIISTASVAGVMGGLGPH 179

Query: 181 AYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFG 240
           AYTASKHAIVGLTKN ACELGRYGIRVNCISPFGVATSMLVNAWR+S D +E+DECMNFG
Sbjct: 180 AYTASKHAIVGLTKNTACELGRYGIRVNCISPFGVATSMLVNAWRSS-DDQEDDECMNFG 238

Query: 241 IPSQKEVRKMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTSR 300
           +P ++EV KMEEFV GL NLKGTTLR KDIAEAALYLASDES+YVSGHNLVVDGG+TTSR
Sbjct: 239 LPCEQEVEKMEEFVRGLANLKGTTLRGKDIAEAALYLASDESKYVSGHNLVVDGGITTSR 298

Query: 301 NCVGL 305
           NC+GL
Sbjct: 299 NCIGL 303

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225439592|ref|XP_002265892.1| PREDICTED: sex determination protein tasselseed-2-like [Vitis vinifera]

 Score =  518 bits (1333), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 254/306 (83%), Positives = 279/306 (91%), Gaps = 4/306 (1%)

Query: 1   MPAQVMPETNLQGIHVLAWDDAP-PSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVV 59
           MP  +MPE + QG+HVL  +++  P + RLEGK+A++TGGARGIGEA VRLFARHGAKVV
Sbjct: 1   MPVPIMPEKSFQGLHVLGRENSSYPFYNRLEGKIAVVTGGARGIGEATVRLFARHGAKVV 60

Query: 60  IADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGN 119
           IADVEDTLG+ LAS+LAP+ VTFVHCDVSLEEDIEN+INSTVSRYGRLDIL+NNAGVLGN
Sbjct: 61  IADVEDTLGAALASSLAPS-VTFVHCDVSLEEDIENVINSTVSRYGRLDILFNNAGVLGN 119

Query: 120 QRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGP 179
           Q KHKSIIDFD DEFD VMRVNV+GMALGIKHAARVM+ RG GCIISTASVAGVMGGLGP
Sbjct: 120 QSKHKSIIDFDIDEFDQVMRVNVRGMALGIKHAARVMVPRGMGCIISTASVAGVMGGLGP 179

Query: 180 HAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNF 239
           HAYTASKHAIVGLTKN ACELGRYGIRVNCISPFGVATSMLVNAWR+S   EEE++CMNF
Sbjct: 180 HAYTASKHAIVGLTKNTACELGRYGIRVNCISPFGVATSMLVNAWRSS--DEEEEDCMNF 237

Query: 240 GIPSQKEVRKMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTS 299
           GIP ++EV KMEEFVSGL NLKG  LR+KDIAEAALYLASDES+YVSGHNLVVDGG+TTS
Sbjct: 238 GIPCEREVEKMEEFVSGLANLKGHILRAKDIAEAALYLASDESKYVSGHNLVVDGGITTS 297

Query: 300 RNCVGL 305
           RNCVGL
Sbjct: 298 RNCVGL 303

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224087827|ref|XP_002308240.1| predicted protein [Populus trichocarpa] gi|222854216|gb|EEE91763.1| predicted protein [Populus trichocarpa]

 Score =  491 bits (1265), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 243/309 (78%), Positives = 274/309 (88%), Gaps = 8/309 (2%)

Query: 1   MPAQVMPETNLQGIHVL----AWDDAPPSHRRLEGKVAIITGGARGIGEAAVRLFARHGA 56
           MP QVM E  LQ IHV+    + +++  S  RLEG+VAI+TGGARGIGEA VRLFAR GA
Sbjct: 1   MPGQVMQEKTLQSIHVMGREKSTENSTRSPGRLEGRVAIVTGGARGIGEATVRLFARQGA 60

Query: 57  KVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGV 116
           KVVIADVED LG+ L ++LAP+ V+FVHCDVSLE+DIENLINST+S+YG+LDIL+NNAGV
Sbjct: 61  KVVIADVEDALGTSLVNSLAPS-VSFVHCDVSLEKDIENLINSTISQYGKLDILFNNAGV 119

Query: 117 LGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGG 176
           LGNQ K+KSI+DFD DEFD VM VNV+GMALGIKHAARVMI RGGGCIISTASVAGVMGG
Sbjct: 120 LGNQSKNKSIVDFDVDEFDRVMHVNVRGMALGIKHAARVMIPRGGGCIISTASVAGVMGG 179

Query: 177 LGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDEC 236
           LGPHAYTASKHAIVGLTKN ACELGRYGIRVNCISPFGVATSMLVNAWR+SG   EE++ 
Sbjct: 180 LGPHAYTASKHAIVGLTKNTACELGRYGIRVNCISPFGVATSMLVNAWRSSG---EEEDS 236

Query: 237 MNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGV 296
           +NFG+PS+KEV KME+FV GL NLKG TLR++DIAEAALYLASDES+YVSGHNLVVDGG+
Sbjct: 237 LNFGLPSEKEVEKMEDFVRGLANLKGPTLRARDIAEAALYLASDESKYVSGHNLVVDGGI 296

Query: 297 TTSRNCVGL 305
           TTS NCVGL
Sbjct: 297 TTSTNCVGL 305

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224139278|ref|XP_002323034.1| predicted protein [Populus trichocarpa] gi|222867664|gb|EEF04795.1| predicted protein [Populus trichocarpa]

 Score =  491 bits (1264), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 241/309 (77%), Positives = 277/309 (89%), Gaps = 8/309 (2%)

Query: 1   MPAQVMPETNLQGIHVL----AWDDAPPSHRRLEGKVAIITGGARGIGEAAVRLFARHGA 56
           MP QVM E  LQ  +      + +++P S  RLEG+VA++TGGARGIGEA VRLFARHGA
Sbjct: 1   MPCQVMQEKTLQSFYAAGREKSTENSPCSPGRLEGRVAVVTGGARGIGEATVRLFARHGA 60

Query: 57  KVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGV 116
           KVVIADVEDTLG++LA++LAP+ V+FVHCDVSLEEDIENLINSTVS YG+LD+L+NNAGV
Sbjct: 61  KVVIADVEDTLGTLLANSLAPS-VSFVHCDVSLEEDIENLINSTVSHYGKLDVLFNNAGV 119

Query: 117 LGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGG 176
           LGNQ K+KSI++FDA+EFD VM+VNV+G+ALGIKHAARVMI RG GCIISTASVAGVMGG
Sbjct: 120 LGNQSKNKSIVNFDAEEFDRVMQVNVRGVALGIKHAARVMIPRGVGCIISTASVAGVMGG 179

Query: 177 LGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDEC 236
           LGPHAYTASKHAIVGLTKN ACELGRYGIRVNCISPFGVATSMLVNAWR+   G+EE++C
Sbjct: 180 LGPHAYTASKHAIVGLTKNTACELGRYGIRVNCISPFGVATSMLVNAWRS---GDEEEDC 236

Query: 237 MNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGV 296
           +NFG+P +KEV KME+FV GL NLKG TLR++DIAEAALYLASDES+YVSGHNLVVDGG+
Sbjct: 237 LNFGLPCEKEVEKMEDFVRGLANLKGPTLRARDIAEAALYLASDESKYVSGHNLVVDGGI 296

Query: 297 TTSRNCVGL 305
           TTSRNCVGL
Sbjct: 297 TTSRNCVGL 305

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449439827|ref|XP_004137687.1| PREDICTED: short-chain dehydrogenase reductase 2a-like [Cucumis sativus] gi|449483589|ref|XP_004156632.1| PREDICTED: short-chain dehydrogenase reductase 2a-like [Cucumis sativus]

 Score =  489 bits (1258), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 238/310 (76%), Positives = 273/310 (88%), Gaps = 7/310 (2%)

Query: 1   MPAQVMPETNLQG-IHVLAWDDA---PPSHRRLEGKVAIITGGARGIGEAAVRLFARHGA 56
           M AQV+PE +LQ  IH+L  D++   PP H+RLEGKVAI+TGGA+GIGEA VRLFA+HGA
Sbjct: 1   MTAQVLPEQSLQSNIHLLVRDNSSSPPPFHKRLEGKVAIVTGGAKGIGEATVRLFAKHGA 60

Query: 57  KVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGV 116
           KVVIADVED LG  LA+TL+P+PV+FVHCDVS E+D+ENL+++TV  +G++DI++NNAGV
Sbjct: 61  KVVIADVEDILGQALANTLSPSPVSFVHCDVSSEDDVENLVSTTVCLHGQVDIIFNNAGV 120

Query: 117 LGNQ-RKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMG 175
           LGNQ   HKSI+DFD DEF+ VMRVNVKG+ALGIKHAARVMI R  GCIISTASVAGV+G
Sbjct: 121 LGNQSNSHKSILDFDPDEFERVMRVNVKGVALGIKHAARVMIPRATGCIISTASVAGVLG 180

Query: 176 GLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDE 235
           GLGPHAYTASKHAIVGLTKN ACELGRYGIRVNCISPFGVATSMLVNAWR   D EEE+E
Sbjct: 181 GLGPHAYTASKHAIVGLTKNTACELGRYGIRVNCISPFGVATSMLVNAWR--ADVEEEEE 238

Query: 236 CMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
           CMN+G+PS  EV KMEEFV GL NLKG TL+ KDIA+AALYLASDES+Y+SGHNLVVDGG
Sbjct: 239 CMNYGVPSAAEVDKMEEFVRGLANLKGPTLKPKDIAQAALYLASDESKYISGHNLVVDGG 298

Query: 296 VTTSRNCVGL 305
           VTTSRNC+GL
Sbjct: 299 VTTSRNCIGL 308

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297735587|emb|CBI18081.3| unnamed protein product [Vitis vinifera]

 Score =  472 bits (1215), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 238/306 (77%), Positives = 259/306 (84%), Gaps = 26/306 (8%)

Query: 1   MPAQVMPETNLQGIHVLAWDDAP-PSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVV 59
           MP  +MPE + QG+HVL  +++  P + RLEGK+A++TGGARGIGEA VRLFARHGAKVV
Sbjct: 1   MPVPIMPEKSFQGLHVLGRENSSYPFYNRLEGKIAVVTGGARGIGEATVRLFARHGAKVV 60

Query: 60  IADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGN 119
           IADVEDTLG+ LAS+LAP+ VTFVHCDVSLEEDIEN+INSTVSRYGRLDIL+NNAGVLGN
Sbjct: 61  IADVEDTLGAALASSLAPS-VTFVHCDVSLEEDIENVINSTVSRYGRLDILFNNAGVLGN 119

Query: 120 QRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGP 179
           Q KHKSIIDFD DEFD VMRVNV+GMALGIKHAARVM+ RG GCIISTASVAGVMGGLGP
Sbjct: 120 QSKHKSIIDFDIDEFDQVMRVNVRGMALGIKHAARVMVPRGMGCIISTASVAGVMGGLGP 179

Query: 180 HAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNF 239
           HAYTASKHAIVGLTKN ACELGRYGIRVNCISPFGVATSML                   
Sbjct: 180 HAYTASKHAIVGLTKNTACELGRYGIRVNCISPFGVATSML------------------- 220

Query: 240 GIPSQKEVRKMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTS 299
                +EV KMEEFVSGL NLKG  LR+KDIAEAALYLASDES+YVSGHNLVVDGG+TTS
Sbjct: 221 -----REVEKMEEFVSGLANLKGHILRAKDIAEAALYLASDESKYVSGHNLVVDGGITTS 275

Query: 300 RNCVGL 305
           RNCVGL
Sbjct: 276 RNCVGL 281

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356532207|ref|XP_003534665.1| PREDICTED: sex determination protein tasselseed-2-like [Glycine max]

 Score =  456 bits (1173), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 225/302 (74%), Positives = 261/302 (86%), Gaps = 4/302 (1%)

Query: 5   VMPETNLQGIHVLAWDDA-PPSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADV 63
           VM E  LQG+     D    PS +RLEGKVAI+TGGARGIGEA VR+F +HGAKVVIADV
Sbjct: 3   VMSEKPLQGVPPQITDTTFSPSSKRLEGKVAIVTGGARGIGEATVRVFVKHGAKVVIADV 62

Query: 64  EDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKH 123
           ED  G +LA TL+P+  T+VHCDVS+E+++ENLI+ST+SRYG LDI++NNAGVLGNQ K+
Sbjct: 63  EDAAGGMLAETLSPS-ATYVHCDVSIEKEVENLISSTISRYGHLDIMFNNAGVLGNQSKN 121

Query: 124 KSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYT 183
           KSI++FD DEFD VM VNVKG+ALGIKHAARVMI RG GCI+ST+SVAGVMGGLGPHAYT
Sbjct: 122 KSIVNFDPDEFDKVMCVNVKGVALGIKHAARVMIPRGVGCIVSTSSVAGVMGGLGPHAYT 181

Query: 184 ASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPS 243
           ASKHAIVG+TKN ACELGRYGIRVNCISPFGVATSMLVNAW+  GDG  +DE +NFG+P 
Sbjct: 182 ASKHAIVGITKNTACELGRYGIRVNCISPFGVATSMLVNAWKPCGDG--DDEGINFGVPF 239

Query: 244 QKEVRKMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTSRNCV 303
            +EV K+EEFV GL NL+G TLR+ DIA+AALYLASDES+YVSGHNLVVDGGVT+SRNC+
Sbjct: 240 PEEVEKIEEFVRGLANLRGPTLRALDIAQAALYLASDESKYVSGHNLVVDGGVTSSRNCI 299

Query: 304 GL 305
           GL
Sbjct: 300 GL 301

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357506409|ref|XP_003623493.1| Sex determination protein tasselseed-2 [Medicago truncatula] gi|355498508|gb|AES79711.1| Sex determination protein tasselseed-2 [Medicago truncatula]

 Score =  454 bits (1167), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 217/303 (71%), Positives = 265/303 (87%), Gaps = 5/303 (1%)

Query: 5   VMPETNLQGIHVLAWDD--APPSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIAD 62
           VM E  LQ + + + D   +PPS +RLEGK+AI+TGGARGIGEA VR+F +HGAKVVI D
Sbjct: 3   VMSEKPLQELSLHSTDTTFSPPSPKRLEGKIAIVTGGARGIGEATVRIFVKHGAKVVIGD 62

Query: 63  VEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRK 122
           VED LG +LA++L+P+ + +VHCDVS+E+D+ENL+ ST+S YG+LDI++NNAG LGNQ K
Sbjct: 63  VEDELGIMLANSLSPSAI-YVHCDVSVEKDVENLVTSTISHYGKLDIMFNNAGFLGNQSK 121

Query: 123 HKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAY 182
           +KSI++FD +EFD VM VNVKG+ALG+KHAA+VMI RG GCI+ST+SVAGV+GGLGPHAY
Sbjct: 122 NKSIVNFDTEEFDRVMNVNVKGVALGMKHAAKVMIPRGNGCIVSTSSVAGVLGGLGPHAY 181

Query: 183 TASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIP 242
           TASKHAIVGLTKNA+CELG+YGIRVNCISPFGVATSMLVNAWRN  D  E DE +NFG+P
Sbjct: 182 TASKHAIVGLTKNASCELGKYGIRVNCISPFGVATSMLVNAWRNGED--EVDEGINFGLP 239

Query: 243 SQKEVRKMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTSRNC 302
             +EV KMEEFV G+GNL+GTTL+++DIAEA LYLASDES+YVSGHNLVVDGG+T+SRNC
Sbjct: 240 LIEEVEKMEEFVRGIGNLRGTTLKTQDIAEAVLYLASDESKYVSGHNLVVDGGITSSRNC 299

Query: 303 VGL 305
           +GL
Sbjct: 300 IGL 302

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356506756|ref|XP_003522142.1| PREDICTED: sex determination protein tasselseed-2-like isoform 1 [Glycine max]

 Score =  447 bits (1151), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 228/309 (73%), Positives = 267/309 (86%), Gaps = 7/309 (2%)

Query: 3   AQVMPETNLQGIHVLAWDDAPPSHRR-LEGKVAIITGGARGIGEAAVRLFARHGAKVVIA 61
           A+VMPE  L G+ +L+ + +  S  R LEGKVAI+TGGARGIGEA VR+FA++GA+VVIA
Sbjct: 4   AEVMPEKPLHGVPILSRESSFSSSPRRLEGKVAIVTGGARGIGEATVRVFAKNGARVVIA 63

Query: 62  DVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQR 121
           DVED LG++LA TLAP+  T+VHCDVS EE++ENL+ STVSRYG+LDI++NNAGVLGNQ 
Sbjct: 64  DVEDALGTMLAETLAPS-ATYVHCDVSKEEEVENLVRSTVSRYGQLDIMFNNAGVLGNQS 122

Query: 122 KHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHA 181
           K+KSII+FD +EFD VM VNVKGMALGIKHAARVMI +G GCIISTASVAGVMGGLGPHA
Sbjct: 123 KNKSIINFDPEEFDKVMSVNVKGMALGIKHAARVMIPKGIGCIISTASVAGVMGGLGPHA 182

Query: 182 YTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRN-----SGDGEEEDEC 236
           YTASKHAIVGLTKN ACELGRYGIRVNCISPFGVAT+MLVNAW++       D + ++  
Sbjct: 183 YTASKHAIVGLTKNTACELGRYGIRVNCISPFGVATNMLVNAWKSGGGDDDDDDQGDEGI 242

Query: 237 MNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGV 296
           +NFG+P Q+EV KME FV GL NL+G TLR+KDIAEAALYLASDES+YVSGHNLVVDGGV
Sbjct: 243 INFGLPYQEEVEKMEGFVRGLANLQGATLRAKDIAEAALYLASDESKYVSGHNLVVDGGV 302

Query: 297 TTSRNCVGL 305
           T+SRNC+GL
Sbjct: 303 TSSRNCIGL 311

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356568176|ref|XP_003552289.1| PREDICTED: sex determination protein tasselseed-2-like [Glycine max]

 Score =  443 bits (1140), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 220/302 (72%), Positives = 256/302 (84%), Gaps = 7/302 (2%)

Query: 5   VMPETNLQGIHVLAWDDA-PPSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADV 63
           VM E  LQG+     D     S +RLEGKVAI+TGGA+GIGEA VR+F +HGAKV+IADV
Sbjct: 3   VMSEKPLQGVPPQITDTTFSSSSKRLEGKVAIVTGGAKGIGEATVRVFVKHGAKVMIADV 62

Query: 64  EDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKH 123
           ED  G++LA TL+P+  T+VHCDVS+E+++E L++ST+SRYG LDI++NNAGVLGNQ K+
Sbjct: 63  EDAAGAMLAETLSPS-ATYVHCDVSIEKEVEKLVSSTISRYGHLDIMFNNAGVLGNQSKN 121

Query: 124 KSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYT 183
           KSI++FD DEFD VM VNVKG+ALGIKHAARVMI RG GCIIST+SVAGVMGGLGPHAYT
Sbjct: 122 KSIVNFDPDEFDKVMCVNVKGVALGIKHAARVMIPRGIGCIISTSSVAGVMGGLGPHAYT 181

Query: 184 ASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPS 243
           ASKHAIVG+TKN ACELGRYGIRVNCISPFGVATSMLVNAWR       +DE  NFG+P 
Sbjct: 182 ASKHAIVGITKNTACELGRYGIRVNCISPFGVATSMLVNAWRPC-----DDEGTNFGVPF 236

Query: 244 QKEVRKMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTSRNCV 303
            +EV K+EEFV GL NL+G TLR+ DIAEAALYLASDES+YVSGHNLVVDGGVT+SRNC+
Sbjct: 237 PEEVEKIEEFVRGLANLRGPTLRALDIAEAALYLASDESKYVSGHNLVVDGGVTSSRNCI 296

Query: 304 GL 305
           GL
Sbjct: 297 GL 298

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	305
TAIR|locus:2098287	303	SDR2 "short-chain dehydrogenas	0.967	0.973	0.696	1.9e-108
TAIR|locus:2094807	298	SDR4 "short-chain dehydrogenas	0.616	0.630	0.526	2.9e-64
TAIR|locus:2041439	257	SDR3 "short-chain dehydrogenas	0.619	0.735	0.523	1.6e-63
TAIR|locus:2041394	257	SDR5 "short-chain dehydrogenas	0.649	0.770	0.480	4.8e-62
TAIR|locus:2088399	306	AT3G26770 [Arabidopsis thalian	0.836	0.833	0.487	1.6e-61
TAIR|locus:2094822	259	AT3G29260 [Arabidopsis thalian	0.629	0.741	0.505	6.9e-61
TAIR|locus:2041449	258	AT2G47120 [Arabidopsis thalian	0.616	0.728	0.512	1.3e-59
TAIR|locus:2088419	300	AT3G26760 [Arabidopsis thalian	0.849	0.863	0.457	7.3e-59
TAIR|locus:2018149	285	ABA2 "ABA DEFICIENT 2" [Arabid	0.855	0.915	0.469	1.5e-58
TAIR|locus:2125452	343	AT4G03140 [Arabidopsis thalian	0.836	0.743	0.463	6.6e-58

TAIR|locus:2098287 SDR2 "short-chain dehydrogenase/reductase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 1072 (382.4 bits), Expect = 1.9e-108, P = 1.9e-108
 Identities = 218/313 (69%), Positives = 254/313 (81%)

Query:     1 MPAQVMPE-TNLQGIHVLAWDDAPPS--HRRLEGKVAIITGGARGIGEAAVRLFARHGAK 57
             MPAQV+ E T    +H    ++   +   +RLEGKVAIITGGA GIG+A V LFARHGA 
Sbjct:     1 MPAQVIAEQTTFHSVHDTIMEETNTTLYPKRLEGKVAIITGGAHGIGKATVMLFARHGAT 60

Query:    58 VVIADVEDTLGSVLASTLAP---AP-VTFVHCDVSLEEDIENLINSTVSRYGRLDILYNN 113
             VVIADV++  GS LA +L+    +P V F+ CDVS+E D+ENL+N TV+RYGRLDIL+NN
Sbjct:    61 VVIADVDNVAGSSLAKSLSSHKTSPMVAFISCDVSVEADVENLVNVTVARYGRLDILFNN 120

Query:   114 AGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRG-GGCIISTASVAG 172
             AGVLG+Q+KHKSI+DFDADEFD+VMRVNV+G+ LG+KH AR MI RG  GCIISTASVAG
Sbjct:   121 AGVLGDQKKHKSILDFDADEFDHVMRVNVRGVGLGMKHGARAMIKRGFKGCIISTASVAG 180

Query:   173 VMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEE 232
             VMGG+GPHAYTASKHAIVGLTKNAACELG+YGIRVNCISPFGVATSMLVNAWR +  G+ 
Sbjct:   181 VMGGMGPHAYTASKHAIVGLTKNAACELGKYGIRVNCISPFGVATSMLVNAWRKTSGGDV 240

Query:   233 EDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVV 292
             ED+          +V +MEEFV  L NLKG TLR+ DIAEAALYLASDES+YV+GHNLVV
Sbjct:   241 EDD----------DVEEMEEFVRSLANLKGETLRANDIAEAALYLASDESKYVNGHNLVV 290

Query:   293 DGGVTTSRNCVGL 305
             DGGVTT+RNCVGL
Sbjct:   291 DGGVTTARNCVGL 303

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2094807 SDR4 "short-chain dehydrogenase reductase 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 509 (184.2 bits), Expect = 2.9e-64, Sum P(2) = 2.9e-64
 Identities = 101/192 (52%), Positives = 136/192 (70%)

Query:    29 LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVS 88
             L+GK+AIITGGA GIG  AVRLF  HGAKVVI D+++ LG  LA ++     +F  C+V+
Sbjct:    44 LDGKIAIITGGASGIGAEAVRLFTDHGAKVVIVDIQEELGQNLAVSIGLDKASFYRCNVT 103

Query:    89 LEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALG 148
              E D+EN +  TV ++G+LD+L++NAGVL       S++D D + FD  M VNV+G A  
Sbjct:   104 DETDVENAVKFTVEKHGKLDVLFSNAGVL---EAFGSVLDLDLEAFDRTMAVNVRGAAAF 160

Query:   149 IKHAARVMINRGG-GCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRV 207
             IKHAAR M+  G  G I+ T S+A  +GG GPH+YTASKHA++GL ++A   LG+YGIRV
Sbjct:   161 IKHAARSMVASGTRGSIVCTTSIAAEIGGPGPHSYTASKHALLGLIRSACAGLGQYGIRV 220

Query:   208 NCISPFGVATSM 219
             N ++P+GVAT M
Sbjct:   221 NGVAPYGVATGM 232

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0005507 "copper ion binding" evidence=IDA

TAIR|locus:2041439 SDR3 "short-chain dehydrogenase/reductase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 515 (186.3 bits), Expect = 1.6e-63, Sum P(2) = 1.6e-63
 Identities = 101/193 (52%), Positives = 139/193 (72%)

Query:    28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDV 87
             RL+GK+AIITGGA GIG  AVRLF  HGAKVVI D ++ LG  +A ++     +F  CDV
Sbjct:     5 RLDGKIAIITGGASGIGAEAVRLFTDHGAKVVIVDFQEELGQNVAVSVGKDKASFYRCDV 64

Query:    88 SLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMAL 147
             + E+++EN +  TV +YG+LD+L++NAGV+    +  S +D + ++FD  M VNV+G A 
Sbjct:    65 TNEKEVENAVKFTVEKYGKLDVLFSNAGVM---EQPGSFLDLNLEQFDRTMAVNVRGAAA 121

Query:   148 GIKHAARVMINRGG-GCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIR 206
              IKHAAR M+ +G  G I+ T SVA  +GG GPHAYTASKHA++GL K+A   LG+YGIR
Sbjct:   122 FIKHAARAMVEKGTRGSIVCTTSVASEIGGPGPHAYTASKHALLGLVKSACGGLGKYGIR 181

Query:   207 VNCISPFGVATSM 219
             VN ++P+ VAT++
Sbjct:   182 VNGVAPYAVATAI 194

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0009688 "abscisic acid biosynthetic process" evidence=IMP

GO:0042742 "defense response to bacterium" evidence=IMP

TAIR|locus:2041394 SDR5 "short-chain dehydrogenase reductase 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 510 (184.6 bits), Expect = 4.8e-62, Sum P(2) = 4.8e-62
 Identities = 97/202 (48%), Positives = 140/202 (69%)

Query:    25 SHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVH 84
             S +RL+GK+ IITGGA GIG  +VRLF  HGA+VVI DV+D LG  +A ++     ++ H
Sbjct:     2 SGKRLDGKIVIITGGASGIGAESVRLFTEHGARVVIVDVQDELGQNVAVSIGEDKASYYH 61

Query:    85 CDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKG 144
             CDV+ E ++EN +  TV +YG+LD+L++NAGV+       SI+D + +E D  + +N++G
Sbjct:    62 CDVTNETEVENAVKFTVEKYGKLDVLFSNAGVI---EPFVSILDLNLNELDRTIAINLRG 118

Query:   145 MALGIKHAARVMINRG-GGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRY 203
              A  IKHAAR M+ +G  G I+ T SVA  + G  PH YT SKH ++GL K+A+  LG+Y
Sbjct:   119 TAAFIKHAARAMVEKGIRGSIVCTTSVAAEIAGTAPHGYTTSKHGLLGLIKSASGGLGKY 178

Query:   204 GIRVNCISPFGVATSMLVNAWR 225
             GIRVN ++PFGVAT ++ N ++
Sbjct:   179 GIRVNGVAPFGVATPLVCNGFK 200

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2088399 AT3G26770 [Arabidopsis thaliana (taxid:3702)]

 Score = 629 (226.5 bits), Expect = 1.6e-61, P = 1.6e-61
 Identities = 132/271 (48%), Positives = 175/271 (64%)

Query:    27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCD 86
             ++LEGKVA+ITGGA G+G+A    F RHGA+VVIAD++   G+  A  L  +   FV CD
Sbjct:    39 KKLEGKVALITGGASGLGKATASEFLRHGARVVIADLDAETGTKTAKELG-SEAEFVRCD 97

Query:    87 VSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMA 146
             V++E DI   +  TV RYG+LD++YNNAG++G      SI   D  EF+ VMR+NV G+ 
Sbjct:    98 VTVEADIAGAVEMTVERYGKLDVMYNNAGIVGPMTP-ASISQLDMTEFERVMRINVFGVV 156

Query:   147 LGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIR 206
              GIKHAA+ MI    GCI+ T+SVAGV GGL PH+YT SK    G+ K+AA EL  +G+R
Sbjct:   157 SGIKHAAKFMIPARSGCILCTSSVAGVTGGLAPHSYTISKFTTPGIVKSAASELCEHGVR 216

Query:   207 VNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLR 266
             +NCISP  VAT + ++  +                P   E  K+ E V G+G LKG    
Sbjct:   217 INCISPGTVATPLTLSYLQKV-------------FPKVSE-EKLRETVKGMGELKGAECE 262

Query:   267 SKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
               D+A+AALYLAS++ +YV+GHNLVVDGG+T
Sbjct:   263 EADVAKAALYLASNDGKYVTGHNLVVDGGMT 293

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0010089 "xylem development" evidence=RCA

GO:0044036 "cell wall macromolecule metabolic process" evidence=RCA

TAIR|locus:2094822 AT3G29260 [Arabidopsis thaliana (taxid:3702)]

 Score = 505 (182.8 bits), Expect = 6.9e-61, Sum P(2) = 6.9e-61
 Identities = 99/196 (50%), Positives = 137/196 (69%)

Query:    25 SHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVH 84
             S +RL+GK+ IITGGA GIG  A RLF  HGAKVVI D+++ LG  +A ++     +F  
Sbjct:     2 SGQRLDGKIVIITGGASGIGAEAARLFTDHGAKVVIVDLQEELGQNVAVSIGLDKASFYR 61

Query:    85 CDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKG 144
             CD++ E ++EN +  TV ++G+LD+L++NAGV+     H SI+D D + FD  M VNV+G
Sbjct:    62 CDITDETEVENAVKFTVEKHGKLDVLFSNAGVM---EPHGSILDLDLEAFDRTMAVNVRG 118

Query:   145 MALGIKHAARVMINRGG-GCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRY 203
              A  IKHAAR M+  G  G I+ T SV   +GG GPH+YTASKHA++GL ++A   LG+Y
Sbjct:   119 AAAFIKHAARSMVASGTRGSIVCTTSVTAEIGGPGPHSYTASKHALLGLVRSACGGLGKY 178

Query:   204 GIRVNCISPFGVATSM 219
             GIRVN ++P+GVAT +
Sbjct:   179 GIRVNGVAPYGVATGL 194

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2041449 AT2G47120 [Arabidopsis thaliana (taxid:3702)]

 Score = 494 (179.0 bits), Expect = 1.3e-59, Sum P(2) = 1.3e-59
 Identities = 99/193 (51%), Positives = 134/193 (69%)

Query:    28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDV 87
             RLEGK+ IITGGA GIG  A RLF  HGAKVVI DV++ LG  +A  +     +F  CDV
Sbjct:     5 RLEGKIVIITGGASGIGADAARLFTDHGAKVVIVDVQEELGQNVAVLIGKDKASFYRCDV 64

Query:    88 SLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMAL 147
             + E ++E+ +  TV ++G+LD+L++NAGVL      +S +DFD + FD +M VNV+G A 
Sbjct:    65 TNETEVEDAVKFTVEKHGKLDVLFSNAGVL---EPLESFLDFDLERFDRIMAVNVRGAAA 121

Query:   148 GIKHAARVMINRGG-GCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIR 206
              IKHAAR M+ +G  G I+ T SV+  +GG G H YTASKH +VGL ++A  +LG+YGIR
Sbjct:   122 FIKHAARAMVEKGTRGSIVCTTSVSAEIGG-GHHGYTASKHGLVGLIRSACGDLGKYGIR 180

Query:   207 VNCISPFGVATSM 219
             VN ++P+ VAT M
Sbjct:   181 VNGVAPYAVATPM 193

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2088419 AT3G26760 [Arabidopsis thaliana (taxid:3702)]

 Score = 604 (217.7 bits), Expect = 7.3e-59, P = 7.3e-59
 Identities = 125/273 (45%), Positives = 177/273 (64%)

Query:    25 SHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVH 84
             S R+LEGKVA+ITGGA GIG+A    F   GA+V+I D+++  G ++A+ L  A   F+ 
Sbjct:    32 SSRKLEGKVAVITGGASGIGKATAEEFVSQGAQVIIVDIDEEAGHMVATELGSA-AHFLR 90

Query:    85 CDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKG 144
             CDV+ EE I   + + V+R+G+LD++ N+AG+        SI D D D +D VMR+NV+G
Sbjct:    91 CDVTEEEQIAKAVETAVTRHGKLDVMLNSAGI-SCSISPPSIADLDMDTYDKVMRLNVRG 149

Query:   145 MALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYG 204
               LGIKHAAR MI  G G I+  +S++G+MGGLGPHAY+ SK  I G+ K  A EL ++G
Sbjct:   150 TVLGIKHAARAMIPAGSGSILCLSSISGLMGGLGPHAYSISKFTIPGVVKTVASELCKHG 209

Query:   205 IRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT 264
             +R+NCISP G+ T + +  +R +  G            S +E  ++   V+  G LKG  
Sbjct:   210 LRINCISPAGIPTPLTLRMFREAFAGH-----------SIRE-EQLLAIVNATGELKGEK 257

Query:   265 LRSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
                 D+A+AALYLASD++++V+GHNLVVDGG T
Sbjct:   258 CEEIDVAKAALYLASDDAKFVTGHNLVVDGGFT 290

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0008270 "zinc ion binding" evidence=IDA

GO:0009733 "response to auxin stimulus" evidence=RCA

GO:0009741 "response to brassinosteroid stimulus" evidence=RCA

GO:0005739 "mitochondrion" evidence=IDA

TAIR|locus:2018149 ABA2 "ABA DEFICIENT 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 601 (216.6 bits), Expect = 1.5e-58, P = 1.5e-58
 Identities = 133/283 (46%), Positives = 177/283 (62%)

Query:    24 PSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL----APAP 79
             PS R L GKVA+ITGGA GIGE+ VRLF +HGAKV I D++D LG  +  +L    +   
Sbjct:    14 PSQRLL-GKVALITGGATGIGESIVRLFHKHGAKVCIVDLQDDLGGEVCKSLLRGESKET 72

Query:    80 VTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMR 139
               F+H DV +E+DI N ++  V  +G LDIL NNAG+ G       I ++   EF+    
Sbjct:    73 AFFIHGDVRVEDDISNAVDFAVKNFGTLDILINNAGLCG--APCPDIRNYSLSEFEMTFD 130

Query:   140 VNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACE 199
             VNVKG  L +KHAARVMI    G I+S  SV GV+GG+GPH+Y  SKHA++GLT++ A E
Sbjct:   131 VNVKGAFLSMKHAARVMIPEKKGSIVSLCSVGGVVGGVGPHSYVGSKHAVLGLTRSVAAE 190

Query:   200 LGRYGIRVNCISPFGVATSMLVNAWRNSGDGEE-EDECMNFGIPSQKEVRKMEEFVSGLG 258
             LG++GIRVNC+SP+ VAT +   A  +  + E  ED  + F             F +   
Sbjct:   191 LGQHGIRVNCVSPYAVATKL---ALAHLPEEERTEDAFVGF-----------RNFAAANA 236

Query:   259 NLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTSRN 301
             NLKG  L   D+A A L+LASD+SRY+SG NL++DGG T + +
Sbjct:   237 NLKGVELTVDDVANAVLFLASDDSRYISGDNLMIDGGFTCTNH 279

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0010301 "xanthoxin dehydrogenase activity" evidence=IDA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0010182 "sugar mediated signaling pathway" evidence=TAS

GO:0009408 "response to heat" evidence=IMP

GO:0009414 "response to water deprivation" evidence=IMP

GO:0010115 "regulation of abscisic acid biosynthetic process" evidence=IMP

GO:0009750 "response to fructose stimulus" evidence=IMP

GO:0009688 "abscisic acid biosynthetic process" evidence=IMP

GO:0006561 "proline biosynthetic process" evidence=IMP

TAIR|locus:2125452 AT4G03140 [Arabidopsis thaliana (taxid:3702)]

 Score = 595 (214.5 bits), Expect = 6.6e-58, P = 6.6e-58
 Identities = 126/272 (46%), Positives = 170/272 (62%)

Query:    27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCD 86
             R+LEGKVA+ITGGA GIG+A    F  HGAKV+IAD++  +G      L P+   F  CD
Sbjct:    76 RKLEGKVALITGGASGIGKATAGKFISHGAKVIIADIQPQIGRETEQELGPSCAYFP-CD 134

Query:    87 VSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMA 146
             V+ E DI N ++  VS + +LDI+YNNAG+    +   SI+D D + FD V+  NV+G+ 
Sbjct:   135 VTKESDIANAVDFAVSLHTKLDIMYNNAGI--PCKTPPSIVDLDLNVFDKVINTNVRGVM 192

Query:   147 LGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIR 206
              GIKHAARVMI R  G II   SV G+MGGL  H Y+ SK A++G+ ++ A EL ++ IR
Sbjct:   193 AGIKHAARVMIPRNSGSIICAGSVTGMMGGLAQHTYSVSKSAVIGIVRSTASELCKHRIR 252

Query:   207 VNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLR 266
             VNCISPF + TS +++  R    G ++               ++ + V   G L G    
Sbjct:   253 VNCISPFAITTSFVMDEMRQIYPGVDDS--------------RLIQIVQSTGVLNGEVCE 298

Query:   267 SKDIAEAALYLASDESRYVSGHNLVVDGGVTT 298
               D+A AA+YLASD+S+YV+GHNLVVDGG TT
Sbjct:   299 PTDVANAAVYLASDDSKYVNGHNLVVDGGFTT 330

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P46331	YXBG_BACSU	1, ., -, ., -, ., -	0.3357	0.8065	0.9010	yes	no
Q9SCU0	SDR2A_ARATH	1, ., 1, ., 1, ., -	0.6900	0.9672	0.9735	yes	no
Q8KWT4	BACC2_BACIU	1, ., -, ., -, ., -	0.3457	0.8163	0.9841	yes	no
P50160	TS2_MAIZE	No assigned EC number	0.6413	0.9213	0.8363	N/A	no
Q9BTZ2	DHRS4_HUMAN	1, ., 1, ., 1, ., 1, 8, 4	0.3137	0.8721	0.9568	yes	no
P0A2D1	UCPA_SALTY	1, ., -, ., -, ., -	0.3646	0.8032	0.9315	yes	no
Q9WYG0	Y325_THEMA	1, ., -, ., -, ., -	0.3431	0.8032	0.9760	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.1.1	0.921
4th Layer	1.1.1.101	LOW CONFIDENCE prediction!
3rd Layer	1.5.1	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	305
cd05326	249	cd05326, secoisolariciresinol-DH_like_SDR_c, secoi	1e-119
PLN02253	280	PLN02253, PLN02253, xanthoxin dehydrogenase	1e-99
PRK07231	251	PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein)	9e-72
PRK05565	247	PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein)	6e-71
cd05233	234	cd05233, SDR_c, classical (c) SDRs	4e-70
PRK05653	246	PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-65
PRK06172	253	PRK06172, PRK06172, short chain dehydrogenase; Pro	3e-64
cd05341	247	cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta	4e-63
PRK05557	248	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-62
cd05345	248	cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl	3e-58
COG1028	251	COG1028, FabG, Dehydrogenases with different speci	1e-57
PRK12429	258	PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenas	2e-57
PRK12825	249	PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-57
PRK12826	251	PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-prote	6e-57
cd05347	248	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogena	8e-57
PRK06138	252	PRK06138, PRK06138, short chain dehydrogenase; Pro	6e-54
cd05330	257	cd05330, cyclohexanol_reductase_SDR_c, cyclohexano	9e-54
cd05333	240	cd05333, BKR_SDR_c, beta-Keto acyl carrier protein	1e-53
PRK07478	254	PRK07478, PRK07478, short chain dehydrogenase; Pro	2e-53
PRK06841	255	PRK06841, PRK06841, short chain dehydrogenase; Pro	6e-53
PRK12829	264	PRK12829, PRK12829, short chain dehydrogenase; Pro	2e-51
PRK07067	257	PRK07067, PRK07067, sorbitol dehydrogenase; Provis	3e-51
PRK06057	255	PRK06057, PRK06057, short chain dehydrogenase; Pro	5e-51
TIGR01830	239	TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier	3e-50
cd05368	241	cd05368, DHRS6_like_SDR_c, human DHRS6-like, class	3e-50
PRK12939	250	PRK12939, PRK12939, short chain dehydrogenase; Pro	8e-50
TIGR03971	265	TIGR03971, SDR_subfam_1, oxidoreductase, SDR famil	2e-49
cd08944	246	cd08944, SDR_c12, classical (c) SDR, subgroup 12	4e-49
cd05352	252	cd05352, MDH-like_SDR_c, mannitol dehydrogenase (M	1e-48
cd05364	253	cd05364, SDR_c11, classical (c) SDR, subgroup 11	2e-48
cd05366	257	cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol	1e-47
PRK08213	259	PRK08213, PRK08213, gluconate 5-dehydrogenase; Pro	5e-47
TIGR01963	255	TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase	7e-47
PRK08589	272	PRK08589, PRK08589, short chain dehydrogenase; Val	1e-46
TIGR02415	254	TIGR02415, 23BDH, acetoin reductases	3e-46
cd05358	253	cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (Glc	8e-46
PRK08324	681	PRK08324, PRK08324, short chain dehydrogenase; Val	2e-45
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	2e-45
COG4221	246	COG4221, COG4221, Short-chain alcohol dehydrogenas	4e-43
PRK06550	235	PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein)	6e-43
cd05362	243	cd05362, THN_reductase-like_SDR_c, tetrahydroxynap	6e-43
cd08933	261	cd08933, RDH_SDR_c, retinal dehydrogenase-like, cl	8e-43
PRK06171	266	PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydro	3e-42
PRK07063	260	PRK07063, PRK07063, short chain dehydrogenase; Pro	3e-42
PRK06463	255	PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-41
PRK08226	263	PRK08226, PRK08226, short chain dehydrogenase; Pro	1e-41
PRK06935	258	PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrog	1e-41
cd05369	249	cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reducta	2e-41
cd08940	258	cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydroge	4e-41
PRK06398	258	PRK06398, PRK06398, aldose dehydrogenase; Validate	5e-41
cd05363	254	cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH),	2e-40
TIGR01832	248	TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogena	5e-40
PRK08220	252	PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehy	6e-40
cd08930	250	cd08930, SDR_c8, classical (c) SDR, subgroup 8	6e-40
cd05359	242	cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_c	9e-40
PRK07774	250	PRK07774, PRK07774, short chain dehydrogenase; Pro	1e-39
TIGR04316	250	TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxyben	2e-39
PRK07069	251	PRK07069, PRK07069, short chain dehydrogenase; Val	3e-39
cd05371	252	cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydr	3e-39
PRK08265	261	PRK08265, PRK08265, short chain dehydrogenase; Pro	4e-39
PRK12828	239	PRK12828, PRK12828, short chain dehydrogenase; Pro	5e-39
cd09761	242	cd09761, A3DFK9-like_SDR_c, Clostridium thermocell	3e-38
PRK07035	252	PRK07035, PRK07035, short chain dehydrogenase; Pro	4e-38
PRK07060	245	PRK07060, PRK07060, short chain dehydrogenase; Pro	4e-38
PRK12384	259	PRK12384, PRK12384, sorbitol-6-phosphate dehydroge	1e-37
cd08936	256	cd08936, CR_SDR_c, Porcine peroxisomal carbonyl re	1e-37
PRK06124	256	PRK06124, PRK06124, gluconate 5-dehydrogenase; Pro	2e-37
PRK12827	249	PRK12827, PRK12827, short chain dehydrogenase; Pro	3e-37
cd05323	244	cd05323, ADH_SDR_c_like, insect type alcohol dehyd	6e-37
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	7e-37
cd05355	270	cd05355, SDR_c1, classical (c) SDR, subgroup 1	9e-37
cd05331	244	cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydroz	6e-36
cd05349	246	cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl	7e-36
PRK07825	273	PRK07825, PRK07825, short chain dehydrogenase; Pro	1e-35
cd08943	250	cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate al	2e-35
cd05353	250	cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-	2e-35
PRK06500	249	PRK06500, PRK06500, short chain dehydrogenase; Pro	2e-35
PRK06200	263	PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydropheny	3e-35
PRK07097	265	PRK07097, PRK07097, gluconate 5-dehydrogenase; Pro	4e-35
PRK08936	261	PRK08936, PRK08936, glucose-1-dehydrogenase; Provi	9e-35
PRK06701	290	PRK06701, PRK06701, short chain dehydrogenase; Pro	2e-34
PRK07831	262	PRK07831, PRK07831, short chain dehydrogenase; Pro	2e-34
cd05348	257	cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydro	3e-34
cd05339	243	cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hy	6e-34
PRK07791	286	PRK07791, PRK07791, short chain dehydrogenase; Pro	6e-34
PRK06113	255	PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydro	1e-33
PRK13394	262	PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenas	2e-33
PRK07326	237	PRK07326, PRK07326, short chain dehydrogenase; Pro	2e-33
cd05344	253	cd05344, BKR_like_SDR_like, putative beta-ketoacyl	3e-33
PRK06198	260	PRK06198, PRK06198, short chain dehydrogenase; Pro	3e-33
PRK06114	254	PRK06114, PRK06114, short chain dehydrogenase; Pro	3e-33
PRK06181	263	PRK06181, PRK06181, short chain dehydrogenase; Pro	4e-33
cd05365	242	cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroi	5e-33
PRK07856	252	PRK07856, PRK07856, short chain dehydrogenase; Pro	1e-32
cd05374	248	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster	1e-32
PRK08628	258	PRK08628, PRK08628, short chain dehydrogenase; Pro	2e-32
PRK12743	256	PRK12743, PRK12743, oxidoreductase; Provisional	6e-32
PRK08643	256	PRK08643, PRK08643, acetoin reductase; Validated	7e-32
PRK12937	245	PRK12937, PRK12937, short chain dehydrogenase; Pro	8e-32
PRK07666	239	PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein)	8e-32
PRK09186	256	PRK09186, PRK09186, flagellin modification protein	9e-32
PRK08217	253	PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-31
PRK09242	257	PRK09242, PRK09242, tropinone reductase; Provision	3e-31
PRK07523	255	PRK07523, PRK07523, gluconate 5-dehydrogenase; Pro	3e-31
PRK12481	251	PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrog	4e-31
pfam00106	167	pfam00106, adh_short, short chain dehydrogenase	4e-31
TIGR02632	676	TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate	7e-31
cd05329	251	cd05329, TR_SDR_c, tropinone reductase-I and II (T	8e-31
PRK07814	263	PRK07814, PRK07814, short chain dehydrogenase; Pro	9e-31
PRK08277	278	PRK08277, PRK08277, D-mannonate oxidoreductase; Pr	3e-30
PRK08063	250	PRK08063, PRK08063, enoyl-(acyl carrier protein) r	5e-30
PRK07074	257	PRK07074, PRK07074, short chain dehydrogenase; Pro	6e-30
cd05332	257	cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxyste	8e-30
PRK08085	254	PRK08085, PRK08085, gluconate 5-dehydrogenase; Pro	8e-30
PRK08993	253	PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrog	9e-30
TIGR03206	250	TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxy	2e-29
PRK06194	287	PRK06194, PRK06194, hypothetical protein; Provisio	3e-29
PRK06077	252	PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein)	9e-29
PRK12935	247	PRK12935, PRK12935, acetoacetyl-CoA reductase; Pro	2e-28
PRK05867	253	PRK05867, PRK05867, short chain dehydrogenase; Pro	2e-28
PRK08261	450	PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-28
PRK08642	253	PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-28
cd08935	271	cd08935, mannonate_red_SDR_c, putative D-mannonate	2e-28
PRK12824	245	PRK12824, PRK12824, acetoacetyl-CoA reductase; Pro	2e-28
cd08939	239	cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine	2e-28
cd05322	257	cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehy	3e-28
PRK06123	248	PRK06123, PRK06123, short chain dehydrogenase; Pro	4e-28
PRK07792	306	PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein)	9e-28
cd08932	223	cd08932, HetN_like_SDR_c, HetN oxidoreductase-like	1e-27
cd05338	246	cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogena	1e-27
PRK08267	260	PRK08267, PRK08267, short chain dehydrogenase; Pro	2e-27
PRK09135	249	PRK09135, PRK09135, pteridine reductase; Provision	3e-27
cd08929	226	cd08929, SDR_c4, classical (c) SDR, subgroup 4	3e-27
PRK05650	270	PRK05650, PRK05650, short chain dehydrogenase; Pro	3e-27
PRK06523	260	PRK06523, PRK06523, short chain dehydrogenase; Pro	6e-27
PRK06949	258	PRK06949, PRK06949, short chain dehydrogenase; Pro	1e-26
cd08945	258	cd08945, PKR_SDR_c, Polyketide ketoreductase, clas	1e-26
cd08937	256	cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa	2e-26
pfam13561	239	pfam13561, adh_short_C2, Enoyl-(Acyl carrier prote	2e-26
cd05346	249	cd05346, SDR_c5, classical (c) SDR, subgroup 5	2e-26
COG0300	265	COG0300, DltE, Short-chain dehydrogenases of vario	2e-26
PRK06179	270	PRK06179, PRK06179, short chain dehydrogenase; Pro	4e-26
TIGR03325	262	TIGR03325, BphB_TodD, cis-2,3-dihydrobiphenyl-2,3-	4e-26
PRK05855	582	PRK05855, PRK05855, short chain dehydrogenase; Val	8e-26
cd05351	244	cd05351, XR_like_SDR_c, xylulose reductase-like, c	1e-25
TIGR01829	242	TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reducta	2e-25
PRK12745	256	PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-prote	3e-25
cd08931	227	cd08931, SDR_c9, classical (c) SDR, subgroup 9	4e-25
cd05357	234	cd05357, PR_SDR_c, pteridine reductase (PR), class	4e-25
cd08942	250	cd08942, RhlG_SDR_c, RhlG and related beta-ketoacy	5e-25
PRK08945	247	PRK08945, PRK08945, putative oxoacyl-(acyl carrier	9e-25
PRK12823	260	PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1	2e-24
cd08934	243	cd08934, CAD_SDR_c, clavulanic acid dehydrogenase	3e-24
PRK06947	248	PRK06947, PRK06947, glucose-1-dehydrogenase; Provi	6e-24
PRK12936	245	PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-prote	9e-24
cd05343	250	cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, c	1e-23
cd05337	255	cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl	4e-23
PRK05872	296	PRK05872, PRK05872, short chain dehydrogenase; Pro	1e-22
PRK05875	276	PRK05875, PRK05875, short chain dehydrogenase; Pro	1e-22
cd05354	235	cd05354, SDR_c7, classical (c) SDR, subgroup 7	2e-22
PRK06128	300	PRK06128, PRK06128, oxidoreductase; Provisional	5e-22
cd05360	233	cd05360, SDR_c3, classical (c) SDR, subgroup 3	1e-21
PRK05717	255	PRK05717, PRK05717, oxidoreductase; Validated	1e-21
PRK07109	334	PRK07109, PRK07109, short chain dehydrogenase; Pro	2e-21
PRK12742	237	PRK12742, PRK12742, oxidoreductase; Provisional	2e-21
PRK07890	258	PRK07890, PRK07890, short chain dehydrogenase; Pro	2e-21
cd05372	250	cd05372, ENR_SDR, Enoyl acyl carrier protein (ACP)	4e-21
PRK12744	257	PRK12744, PRK12744, short chain dehydrogenase; Pro	6e-21
PRK07576	264	PRK07576, PRK07576, short chain dehydrogenase; Pro	7e-21
cd05373	238	cd05373, SDR_c10, classical (c) SDR, subgroup 10	9e-21
PRK09730	247	PRK09730, PRK09730, putative NAD(P)-binding oxidor	3e-20
PRK07062	265	PRK07062, PRK07062, short chain dehydrogenase; Pro	3e-20
PRK07577	234	PRK07577, PRK07577, short chain dehydrogenase; Pro	3e-20
cd05324	225	cd05324, carb_red_PTCR-like_SDR_c, Porcine testicu	3e-20
cd05327	269	cd05327, retinol-DH_like_SDR_c_like, retinol dehyd	3e-20
cd05340	236	cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-li	5e-20
PRK05866	293	PRK05866, PRK05866, short chain dehydrogenase; Pro	6e-20
cd05350	239	cd05350, SDR_c6, classical (c) SDR, subgroup 6	6e-20
PRK07454	241	PRK07454, PRK07454, short chain dehydrogenase; Pro	4e-19
cd05328	250	cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid de	7e-19
PRK08278	273	PRK08278, PRK08278, short chain dehydrogenase; Pro	9e-19
PRK08416	260	PRK08416, PRK08416, 7-alpha-hydroxysteroid dehydro	2e-18
cd05325	233	cd05325, carb_red_sniffer_like_SDR_c, carbonyl red	2e-18
cd05367	241	cd05367, SPR-like_SDR_c, sepiapterin reductase (SP	2e-18
cd09763	265	cd09763, DHRS1-like_SDR_c, human dehydrogenase/red	4e-18
PRK08264	238	PRK08264, PRK08264, short chain dehydrogenase; Val	5e-18
PRK07985	294	PRK07985, PRK07985, oxidoreductase; Provisional	5e-18
PRK05876	275	PRK05876, PRK05876, short chain dehydrogenase; Pro	7e-18
PRK06914	280	PRK06914, PRK06914, short chain dehydrogenase; Pro	1e-17
PRK07201	657	PRK07201, PRK07201, short chain dehydrogenase; Pro	1e-17
PRK12746	254	PRK12746, PRK12746, short chain dehydrogenase; Pro	2e-17
cd09806	258	cd09806, type1_17beta-HSD-like_SDR_c, human estrog	3e-17
TIGR02685	267	TIGR02685, pter_reduc_Leis, pteridine reductase	3e-17
PRK06125	259	PRK06125, PRK06125, short chain dehydrogenase; Pro	7e-17
PRK07677	252	PRK07677, PRK07677, short chain dehydrogenase; Pro	9e-17
PRK06182	273	PRK06182, PRK06182, short chain dehydrogenase; Val	5e-16
PRK12859	256	PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-prote	5e-16
cd05370	228	cd05370, SDR_c2, classical (c) SDR, subgroup 2	5e-16
COG0623	259	COG0623, FabI, Enoyl-[acyl-carrier-protein]	6e-16
PRK08263	275	PRK08263, PRK08263, short chain dehydrogenase; Pro	8e-16
TIGR01831	239	TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-prote	9e-16
PRK05693	274	PRK05693, PRK05693, short chain dehydrogenase; Pro	1e-15
PRK12428	241	PRK12428, PRK12428, 3-alpha-hydroxysteroid dehydro	1e-15
PRK12748	256	PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-prote	3e-15
PRK07832	272	PRK07832, PRK07832, short chain dehydrogenase; Pro	3e-15
cd05356	239	cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxyst	4e-15
PRK07024	257	PRK07024, PRK07024, short chain dehydrogenase; Pro	7e-15
PRK12747	252	PRK12747, PRK12747, short chain dehydrogenase; Pro	2e-14
PRK06139	330	PRK06139, PRK06139, short chain dehydrogenase; Pro	2e-14
PRK09134	258	PRK09134, PRK09134, short chain dehydrogenase; Pro	1e-13
PRK06940	275	PRK06940, PRK06940, short chain dehydrogenase; Pro	2e-13
PRK09072	263	PRK09072, PRK09072, short chain dehydrogenase; Pro	2e-13
cd08953	436	cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup	3e-13
PRK06720	169	PRK06720, PRK06720, hypothetical protein; Provisio	5e-13
PRK06180	277	PRK06180, PRK06180, short chain dehydrogenase; Pro	2e-12
PRK09291	257	PRK09291, PRK09291, short chain dehydrogenase; Pro	9e-12
PRK12938	246	PRK12938, PRK12938, acetyacetyl-CoA reductase; Pro	4e-11
PRK08339	263	PRK08339, PRK08339, short chain dehydrogenase; Pro	5e-11
PRK10538	248	PRK10538, PRK10538, malonic semialdehyde reductase	6e-11
PRK05786	238	PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-10
cd05334	221	cd05334, DHPR_SDR_c_like, dihydropteridine reducta	3e-10
cd09762	243	cd09762, HSDL2_SDR_c, human hydroxysteroid dehydro	3e-10
PRK08219	227	PRK08219, PRK08219, short chain dehydrogenase; Pro	3e-10
PRK07041	230	PRK07041, PRK07041, short chain dehydrogenase; Pro	9e-10
PRK06197	306	PRK06197, PRK06197, short chain dehydrogenase; Pro	2e-09
smart00822	180	smart00822, PKS_KR, This enzymatic domain is part	2e-09
pfam08659	181	pfam08659, KR, KR domain	3e-09
cd11731	198	cd11731, Lin1944_like_SDR_c, Lin1944 and related p	4e-09
cd09807	274	cd09807, retinol-DH_like_SDR_c, retinol dehydrogen	8e-09
COG3967	245	COG3967, DltE, Short-chain dehydrogenase involved	1e-08
cd02266	186	cd02266, SDR, Short-chain dehydrogenases/reductase	1e-08
PRK07533	258	PRK07533, PRK07533, enoyl-(acyl carrier protein) r	2e-08
PLN02780	320	PLN02780, PLN02780, ketoreductase/ oxidoreductase	2e-08
PRK06196	315	PRK06196, PRK06196, oxidoreductase; Provisional	3e-08
PRK08159	272	PRK08159, PRK08159, enoyl-(acyl carrier protein) r	5e-08
PRK08594	257	PRK08594, PRK08594, enoyl-(acyl carrier protein) r	6e-08
PRK07806	248	PRK07806, PRK07806, short chain dehydrogenase; Pro	8e-08
PRK06483	236	PRK06483, PRK06483, dihydromonapterin reductase; P	8e-08
cd05361	242	cd05361, haloalcohol_DH_SDR_c-like, haloalcohol de	9e-08
PRK05993	277	PRK05993, PRK05993, short chain dehydrogenase; Pro	2e-07
PRK06079	252	PRK06079, PRK06079, enoyl-(acyl carrier protein) r	2e-07
PRK08703	239	PRK08703, PRK08703, short chain dehydrogenase; Pro	2e-07
PRK08340	259	PRK08340, PRK08340, glucose-1-dehydrogenase; Provi	6e-07
PRK07370	258	PRK07370, PRK07370, enoyl-(acyl carrier protein) r	4e-06
COG0451	314	COG0451, WcaG, Nucleoside-diphosphate-sugar epimer	5e-06
cd05258	337	cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, e	6e-06
cd09809	284	cd09809, human_WWOX_like_SDR_c-like, human WWOX (W	8e-06
cd05274	375	cd05274, KR_FAS_SDR_x, ketoreductase (KR) and fatt	1e-05
PRK08415	274	PRK08415, PRK08415, enoyl-(acyl carrier protein) r	1e-05
PRK08177	225	PRK08177, PRK08177, short chain dehydrogenase; Pro	1e-05
PRK07102	243	PRK07102, PRK07102, short chain dehydrogenase; Pro	2e-05
cd09805	281	cd09805, type2_17beta_HSD-like_SDR_c, human 17beta	3e-05
PRK07775	274	PRK07775, PRK07775, short chain dehydrogenase; Pro	6e-05
PRK06603	260	PRK06603, PRK06603, enoyl-(acyl carrier protein) r	7e-05
PRK08017	256	PRK08017, PRK08017, oxidoreductase; Provisional	2e-04
cd09810	311	cd09810, LPOR_like_SDR_c_like, light-dependent pro	2e-04
PRK06101	240	PRK06101, PRK06101, short chain dehydrogenase; Pro	6e-04
pfam01370	233	pfam01370, Epimerase, NAD dependent epimerase/dehy	8e-04
PRK06953	222	PRK06953, PRK06953, short chain dehydrogenase; Pro	0.001
cd09808	255	cd09808, DHRS-12_like_SDR_c-like, human dehydrogen	0.001
cd08941	290	cd08941, 3KS_SDR_c, 3-keto steroid reductase, clas	0.002
cd11730	206	cd11730, Tthb094_like_SDR_c, Tthb094 and related p	0.004
PRK06924	251	PRK06924, PRK06924, short chain dehydrogenase; Pro	0.004

>gnl|CDD|187587 cd05326, secoisolariciresinol-DH_like_SDR_c, secoisolariciresinol dehydrogenase (secoisolariciresinol-DH)-like, classical (c) SDRs

 Score =  340 bits (875), Expect = e-119
 Identities = 154/270 (57%), Positives = 192/270 (71%), Gaps = 21/270 (7%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDV 87
           RL+GKVAIITGGA GIGEA  RLFA+HGA+VVIAD++D  G  +A+ L    ++FVHCDV
Sbjct: 1   RLDGKVAIITGGASGIGEATARLFAKHGARVVIADIDDDAGQAVAAELGDPDISFVHCDV 60

Query: 88  SLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMAL 147
           ++E D+   +++ V+R+GRLDI++NNAGVLG      SI++   +EF+ V+ VNV G  L
Sbjct: 61  TVEADVRAAVDTAVARFGRLDIMFNNAGVLGAPCY--SILETSLEEFERVLDVNVYGAFL 118

Query: 148 GIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRV 207
           G KHAARVMI    G I+S ASVAGV+GGLGPHAYTASKHA++GLT++AA ELG +GIRV
Sbjct: 119 GTKHAARVMIPAKKGSIVSVASVAGVVGGLGPHAYTASKHAVLGLTRSAATELGEHGIRV 178

Query: 208 NCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRS 267
           NC+SP+GVAT +L                         E   +EE V G  NLKGT LR 
Sbjct: 179 NCVSPYGVATPLLTAG-------------------FGVEDEAIEEAVRGAANLKGTALRP 219

Query: 268 KDIAEAALYLASDESRYVSGHNLVVDGGVT 297
           +DIA A LYLASD+SRYVSG NLVVDGG+T
Sbjct: 220 EDIAAAVLYLASDDSRYVSGQNLVVDGGLT 249

Podophyllum secoisolariciresinol-DH is a homo tetrameric, classical SDR that catalyzes the NAD-dependent conversion of (-)-secoisolariciresinol to (-)-matairesinol via a (-)-lactol intermediate. (-)-Matairesinol is an intermediate to various 8'-lignans, including the cancer-preventive mammalian lignan, and those involved in vascular plant defense. This subgroup also includes rice momilactone A synthase which catalyzes the conversion of 3beta-hydroxy-9betaH-pimara-7,15-dien-19,6beta-olide into momilactone A, Arabidopsis ABA2 which during abscisic acid (ABA) biosynthesis, catalyzes the conversion of xanthoxin to abscisic aldehyde and, maize Tasselseed2 which participate in the maize sex determination pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|177895 PLN02253, PLN02253, xanthoxin dehydrogenase

 Score =  293 bits (752), Expect = 1e-99
 Identities = 130/281 (46%), Positives = 180/281 (64%), Gaps = 16/281 (5%)

Query: 20  DDAPPSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAP 79
             +    +RL GKVA++TGGA GIGE+ VRLF +HGAKV I D++D LG  +  +L   P
Sbjct: 7   SASSLPSQRLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEP 66

Query: 80  -VTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVM 138
            V F HCDV++E+D+   ++ TV ++G LDI+ NNAG+ G       I + +  EF+ V 
Sbjct: 67  NVCFFHCDVTVEDDVSRAVDFTVDKFGTLDIMVNNAGLTG--PPCPDIRNVELSEFEKVF 124

Query: 139 RVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAAC 198
            VNVKG+ LG+KHAAR+MI    G I+S  SVA  +GGLGPHAYT SKHA++GLT++ A 
Sbjct: 125 DVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGLGPHAYTGSKHAVLGLTRSVAA 184

Query: 199 ELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLG 258
           ELG++GIRVNC+SP+ V T++   A  +  + E  ++ +               F     
Sbjct: 185 ELGKHGIRVNCVSPYAVPTAL---ALAHLPEDERTEDAL----------AGFRAFAGKNA 231

Query: 259 NLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTS 299
           NLKG  L   D+A A L+LASDE+RY+SG NL++DGG T +
Sbjct: 232 NLKGVELTVDDVANAVLFLASDEARYISGLNLMIDGGFTCT 272

Length = 280

>gnl|CDD|235975 PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  221 bits (566), Expect = 9e-72
 Identities = 110/274 (40%), Positives = 146/274 (53%), Gaps = 28/274 (10%)

Query: 27  RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADV-EDTLGSVLASTLAPAPVTFVHC 85
            RLEGKVAI+TG + GIGE   R FA  GA+VV+ D  E+    V A  LA      V  
Sbjct: 1   MRLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAA 60

Query: 86  DVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGM 145
           DVS E D+E  + + + R+G +DIL NNAG      ++  ++D D  EFD +  VNVK  
Sbjct: 61  DVSDEADVEAAVAAALERFGSVDILVNNAGT---THRNGPLLDVDEAEFDRIFAVNVKSP 117

Query: 146 ALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGI 205
            L  + A   M   GGG I++ AS AG+    G   Y ASK A++ LTK  A ELG   I
Sbjct: 118 YLWTQAAVPAMRGEGGGAIVNVASTAGLRPRPGLGWYNASKGAVITLTKALAAELGPDKI 177

Query: 206 RVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSG--LGNLKGT 263
           RVN ++P  V T +L       G+   E+                 +F++   LG L GT
Sbjct: 178 RVNAVAPVVVETGLLEAFM---GEPTPENR---------------AKFLATIPLGRL-GT 218

Query: 264 TLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
               +DIA AAL+LASDE+ +++G  LVVDGG  
Sbjct: 219 P---EDIANAALFLASDEASWITGVTLVVDGGRC 249

Length = 251

>gnl|CDD|235506 PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  219 bits (560), Expect = 6e-71
 Identities = 99/273 (36%), Positives = 145/273 (53%), Gaps = 31/273 (11%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIA-DVEDTLGSVLASTLAPAPVT--FVH 84
           +L GKVAI+TG + GIG A   L A+ GAKVVIA D+ +     L   +         V 
Sbjct: 2   KLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVK 61

Query: 85  CDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKG 144
            DVS EED+ENL+   V ++G++DIL NNAG+         + D   +E+D V+ VN+ G
Sbjct: 62  ADVSSEEDVENLVEQIVEKFGKIDILVNNAGIS----NFGLVTDMTDEEWDRVIDVNLTG 117

Query: 145 MALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYG 204
           + L  ++A   MI R  G I++ +S+ G++G      Y+ASK A+   TK  A EL   G
Sbjct: 118 VMLLTRYALPYMIKRKSGVIVNISSIWGLIGASCEVLYSASKGAVNAFTKALAKELAPSG 177

Query: 205 IRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT 264
           IRVN ++P  + T M       S   EE+ E +   IP  +           LG      
Sbjct: 178 IRVNAVAPGAIDTEM------WSSFSEEDKEGLAEEIPLGR-----------LG------ 214

Query: 265 LRSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
            + ++IA+  L+LASD++ Y++G  + VDGG T
Sbjct: 215 -KPEEIAKVVLFLASDDASYITGQIITVDGGWT 246

Length = 247

>gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs

 Score =  216 bits (553), Expect = 4e-70
 Identities = 93/261 (35%), Positives = 133/261 (50%), Gaps = 28/261 (10%)

Query: 34  AIITGGARGIGEAAVRLFARHGAKVVIADV-EDTLGSVLASTLAPAPVTFVHCDVSLEED 92
           A++TG + GIG A  R  AR GAKVV+AD  E+ L  + A          V  DVS EED
Sbjct: 1   ALVTGASSGIGRAIARRLAREGAKVVLADRNEEALAELAAIEALGGNAVAVQADVSDEED 60

Query: 93  IENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHA 152
           +E L+   +  +GRLDIL NNAG+         + +   +++D V+ VN+ G+ L  + A
Sbjct: 61  VEALVEEALEEFGRLDILVNNAGIARP----GPLEELTDEDWDRVLDVNLTGVFLLTRAA 116

Query: 153 ARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISP 212
              M  +GGG I++ +SVAG+    G  AY ASK A+ GLT++ A EL  YGIRVN ++P
Sbjct: 117 LPHMKKQGGGRIVNISSVAGLRPLPGQAAYAASKAALEGLTRSLALELAPYGIRVNAVAP 176

Query: 213 FGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSKDIAE 272
             V T ML        + E                              G     +++AE
Sbjct: 177 GLVDTPMLAKLGPEEAEKELAAA-----------------------IPLGRLGTPEEVAE 213

Query: 273 AALYLASDESRYVSGHNLVVD 293
           A ++LASDE+ Y++G  + VD
Sbjct: 214 AVVFLASDEASYITGQVIPVD 234

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234

>gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score =  205 bits (523), Expect = 3e-65
 Identities = 87/271 (32%), Positives = 133/271 (49%), Gaps = 30/271 (11%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPA--PVTFVHC 85
            L+GK A++TG +RGIG A     A  GAKVVI D  +     LA+ L  A      +  
Sbjct: 2   SLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVF 61

Query: 86  DVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGM 145
           DVS E  +  LI + V  +G LDIL NNAG+  +      +     +++D V+ VN+ G 
Sbjct: 62  DVSDEAAVRALIEAAVEAFGALDILVNNAGITRD----ALLPRMSEEDWDRVIDVNLTGT 117

Query: 146 ALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGI 205
              ++ A   MI    G I++ +SV+GV G  G   Y+A+K  ++G TK  A EL   GI
Sbjct: 118 FNVVRAALPPMIKARYGRIVNISSVSGVTGNPGQTNYSAAKAGVIGFTKALALELASRGI 177

Query: 206 RVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL 265
            VN ++P  + T M        G  EE    +   IP    + ++ +             
Sbjct: 178 TVNAVAPGFIDTDM------TEGLPEEVKAEILKEIP----LGRLGQ------------- 214

Query: 266 RSKDIAEAALYLASDESRYVSGHNLVVDGGV 296
             +++A A  +LASD + Y++G  + V+GG+
Sbjct: 215 -PEEVANAVAFLASDAASYITGQVIPVNGGM 244

Length = 246

>gnl|CDD|180440 PRK06172, PRK06172, short chain dehydrogenase; Provisional

 Score =  202 bits (516), Expect = 3e-64
 Identities = 105/272 (38%), Positives = 152/272 (55%), Gaps = 26/272 (9%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLG--SVLASTLAPAPVTFVHC 85
              GKVA++TGGA GIG A    FAR GAKVV+AD +   G  +V     A     FV C
Sbjct: 4   TFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVAC 63

Query: 86  DVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGM 145
           DV+ + +++ L+  T++ YGRLD  +NNAG+   Q +   + +    EFD +M VNVKG+
Sbjct: 64  DVTRDAEVKALVEQTIAAYGRLDYAFNNAGIEIEQGR---LAEGSEAEFDAIMGVNVKGV 120

Query: 146 ALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGI 205
            L +K+   +M+ +GGG I++TASVAG+        Y ASKHA++GLTK+AA E  + GI
Sbjct: 121 WLCMKYQIPLMLAQGGGAIVNTASVAGLGAAPKMSIYAASKHAVIGLTKSAAIEYAKKGI 180

Query: 206 RVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL 265
           RVN + P  + T M   A               +    +K      EF + +  + G   
Sbjct: 181 RVNAVCPAVIDTDMFRRA---------------YEADPRK-----AEFAAAMHPV-GRIG 219

Query: 266 RSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
           + +++A A LYL SD + + +GH L+VDGG T
Sbjct: 220 KVEEVASAVLYLCSDGASFTTGHALMVDGGAT 251

Length = 253

>gnl|CDD|187600 cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score =  199 bits (508), Expect = 4e-63
 Identities = 101/273 (36%), Positives = 141/273 (51%), Gaps = 30/273 (10%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDV 87
           RL+GKVAI+TGGARG+G A  RL    GAKVV++D+ D  G   A+ L  A   F H DV
Sbjct: 2   RLKGKVAIVTGGARGLGLAHARLLVAEGAKVVLSDILDEEGQAAAAELGDA-ARFFHLDV 60

Query: 88  SLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMAL 147
           + E+    ++++    +GRLD+L NNAG+L       ++     +E+  ++ +N+ G+ L
Sbjct: 61  TDEDGWTAVVDTAREAFGRLDVLVNNAGILTG----GTVETTTLEEWRRLLDINLTGVFL 116

Query: 148 GIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELG--RYGI 205
           G +     M   GGG II+ +S+ G++G     AY ASK A+ GLTK+AA E     YGI
Sbjct: 117 GTRAVIPPMKEAGGGSIINMSSIEGLVGDPALAAYNASKGAVRGLTKSAALECATQGYGI 176

Query: 206 RVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL 265
           RVN + P  + T M           + E                M           G   
Sbjct: 177 RVNSVHPGYIYTPMT----DELLIAQGE--------MGNYPNTPM-----------GRAG 213

Query: 266 RSKDIAEAALYLASDESRYVSGHNLVVDGGVTT 298
              +IA A +YLASDES +V+G  LVVDGG T 
Sbjct: 214 EPDEIAYAVVYLASDESSFVTGSELVVDGGYTA 246

This subgroup includes members identified as 3beta17beta hydroxysteroid dehydrogenase, 20beta hydroxysteroid dehydrogenase, and R-alcohol dehydrogenase. These proteins exhibit the canonical active site tetrad and glycine rich NAD(P)-binding motif of the classical SDRs. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 247

>gnl|CDD|235500 PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score =  198 bits (505), Expect = 1e-62
 Identities = 88/273 (32%), Positives = 133/273 (48%), Gaps = 31/273 (11%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADV-EDTLGSVLASTLAPAPVTF--VH 84
            LEGKVA++TG +RGIG A     A  GA VVI     +     L + +         V 
Sbjct: 2   SLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQ 61

Query: 85  CDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKG 144
            DVS  E +E  ++   + +G +DIL NNAG+     +   ++    +++D V+  N+ G
Sbjct: 62  GDVSDAESVERAVDEAKAEFGGVDILVNNAGIT----RDNLLMRMKEEDWDRVIDTNLTG 117

Query: 145 MALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYG 204
           +    K  AR M+ +  G II+ +SV G+MG  G   Y ASK  ++G TK+ A EL   G
Sbjct: 118 VFNLTKAVARPMMKQRSGRIINISSVVGLMGNPGQANYAASKAGVIGFTKSLARELASRG 177

Query: 205 IRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT 264
           I VN ++P  + T M           E+  E +   IP  +           LG      
Sbjct: 178 ITVNAVAPGFIETDM------TDALPEDVKEAILAQIPLGR-----------LG------ 214

Query: 265 LRSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
            + ++IA A  +LASDE+ Y++G  L V+GG+ 
Sbjct: 215 -QPEEIASAVAFLASDEAAYITGQTLHVNGGMV 246

Length = 248

>gnl|CDD|187603 cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 3, classical (c) SDR

 Score =  187 bits (476), Expect = 3e-58
 Identities = 105/270 (38%), Positives = 143/270 (52%), Gaps = 28/270 (10%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDV 87
           RLEGKVAI+TG   G GE   R FA+ GA+VVIAD+       +A+ +  A +  +  DV
Sbjct: 2   RLEGKVAIVTGAGSGFGEGIARRFAQEGARVVIADINADGAERVAADIGEAAI-AIQADV 60

Query: 88  SLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMAL 147
           +   D+E ++ + +S++GRLDIL NNAG+     ++K +++ D +EFD V  VNVK + L
Sbjct: 61  TKRADVEAMVEAALSKFGRLDILVNNAGI---THRNKPMLEVDEEEFDRVFAVNVKSIYL 117

Query: 148 GIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRV 207
             +     M  +GGG II+ AS AG+    G   Y ASK  +V  TK  A EL    IRV
Sbjct: 118 SAQALVPHMEEQGGGVIINIASTAGLRPRPGLTWYNASKGWVVTATKAMAVELAPRNIRV 177

Query: 208 NCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSG--LGNLKGTTL 265
           NC+ P    T +L                  F      E R   +F +   LG L     
Sbjct: 178 NCLCPVAGETPLL----------------SMFMGEDTPENR--AKFRATIPLGRL----S 215

Query: 266 RSKDIAEAALYLASDESRYVSGHNLVVDGG 295
              DIA AALYLASDE+ +++G  L VDGG
Sbjct: 216 TPDDIANAALYLASDEASFITGVALEVDGG 245

This subgroup includes the putative Brucella melitensis biovar Abortus 2308 BKR, FabG, Mesorhizobium loti MAFF303099 FabG, and other classical SDRs. BKR, a member of the SDR family, catalyzes the NADPH-dependent reduction of acyl carrier protein in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of 4 elongation steps, which are repeated to extend the fatty acid chain thru the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I Fas utilizes one or 2 multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 248

>gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

 Score =  185 bits (471), Expect = 1e-57
 Identities = 87/277 (31%), Positives = 130/277 (46%), Gaps = 34/277 (12%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSV-----LASTLAPAPVTF 82
            L GKVA++TG + GIG A  R  AR GA+VV+A       +                  
Sbjct: 2   DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAA 61

Query: 83  VHCDVS-LEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVN 141
           V  DVS  EE +E L+ +    +GR+DIL NNAG+         + +   +++D V+ VN
Sbjct: 62  VAADVSDDEESVEALVAAAEEEFGRIDILVNNAGI---AGPDAPLEELTEEDWDRVIDVN 118

Query: 142 VKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELG 201
           + G  L  + A  +M  +    I++ +SVAG+ G  G  AY ASK A++GLTK  A EL 
Sbjct: 119 LLGAFLLTRAALPLMKKQR---IVNISSVAGLGGPPGQAAYAASKAALIGLTKALALELA 175

Query: 202 RYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLK 261
             GIRVN ++P  + T M         +  +    +   IP  +                
Sbjct: 176 PRGIRVNAVAPGYIDTPMTAALESAELEALKR---LAARIPLGRLGTP------------ 220

Query: 262 GTTLRSKDIAEAALYLASD-ESRYVSGHNLVVDGGVT 297
                 +++A A  +LASD  + Y++G  L VDGG+ 
Sbjct: 221 ------EEVAAAVAFLASDEAASYITGQTLPVDGGLL 251

Length = 251

>gnl|CDD|237100 PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenase; Provisional

 Score =  185 bits (471), Expect = 2e-57
 Identities = 98/275 (35%), Positives = 144/275 (52%), Gaps = 24/275 (8%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVH--C 85
            L+GKVA++TG A GIG       A+ GAKVVIAD+ D   +  A  L  A    +    
Sbjct: 1   MLKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAM 60

Query: 86  DVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSII-DFDADEFDNVMRVNVKG 144
           DV+ EE I   I+  V  +G +DIL NNAG+     +H + I DF  +++  ++ + + G
Sbjct: 61  DVTDEEAINAGIDYAVETFGGVDILVNNAGI-----QHVAPIEDFPTEKWKKMIAIMLDG 115

Query: 145 MALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYG 204
             L  K A  +M  +GGG II+ ASV G++G  G  AY ++KH ++GLTK  A E   +G
Sbjct: 116 AFLTTKAALPIMKAQGGGRIINMASVHGLVGSAGKAAYVSAKHGLIGLTKVVALEGATHG 175

Query: 205 IRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRK--MEEFVSGLGNLKG 262
           + VN I P  V T  LV         +  D     GI  ++ +    +          + 
Sbjct: 176 VTVNAICPGYVDTP-LV-------RKQIPDLAKERGISEEEVLEDVLLPLVPQK----RF 223

Query: 263 TTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
           TT+  ++IA+ AL+LAS  ++ V+G   VVDGG T
Sbjct: 224 TTV--EEIADYALFLASFAAKGVTGQAWVVDGGWT 256

Length = 258

>gnl|CDD|237218 PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  184 bits (469), Expect = 3e-57
 Identities = 92/275 (33%), Positives = 133/275 (48%), Gaps = 37/275 (13%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVI------ADVEDTLGSVLASTLAPAPVT 81
            L G+VA++TG ARG+G A     AR GA VV+         E+ + +V A         
Sbjct: 3   SLMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEA---LGRRAQ 59

Query: 82  FVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVN 141
            V  DV+ +  +E  + + V R+GR+DIL NNAG+  +    K + D   DE+D V+ VN
Sbjct: 60  AVQADVTDKAALEAAVAAAVERFGRIDILVNNAGIFED----KPLADMSDDEWDEVIDVN 115

Query: 142 VKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELG 201
           + G+   ++     M  + GG I++ +SVAG+ G  G   Y A+K  +VGLTK  A EL 
Sbjct: 116 LSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPGWPGRSNYAAAKAGLVGLTKALARELA 175

Query: 202 RYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLK 261
            YGI VN ++P  + T M           EE  E  +   P                   
Sbjct: 176 EYGITVNMVAPGDIDTDMK------EATIEEAREAKDAETPL------------------ 211

Query: 262 GTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGV 296
           G +   +DIA A  +L SD S Y++G  + V GGV
Sbjct: 212 GRSGTPEDIARAVAFLCSDASDYITGQVIEVTGGV 246

Length = 249

>gnl|CDD|183775 PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

 Score =  183 bits (467), Expect = 6e-57
 Identities = 94/278 (33%), Positives = 131/278 (47%), Gaps = 32/278 (11%)

Query: 27  RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLA---PAPVTFV 83
           R LEG+VA++TG ARGIG A     A  GA+V++ D+     +  A  +           
Sbjct: 2   RDLEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQ 61

Query: 84  HCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVK 143
             DV     ++  + + V  +GRLDIL  NAG+           + D ++++ V+ VN+ 
Sbjct: 62  -VDVRDRAALKAAVAAGVEDFGRLDILVANAGIFPLTP----FAEMDDEQWERVIDVNLT 116

Query: 144 GMALGIKHAARVMINRGGGCIISTASVAGVMGGL-GPHAYTASKHAIVGLTKNAACELGR 202
           G  L  + A   +I  GGG I+ T+SVAG   G  G   Y ASK  +VG T+  A EL  
Sbjct: 117 GTFLLTQAALPALIRAGGGRIVLTSSVAGPRVGYPGLAHYAASKAGLVGFTRALALELAA 176

Query: 203 YGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKG 262
             I VN + P GV T M  N         +  E +   IP           +  LG    
Sbjct: 177 RNITVNSVHPGGVDTPMAGNL-----GDAQWAEAIAAAIP-----------LGRLGE--- 217

Query: 263 TTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTSR 300
                +DIA A L+LASDE+RY++G  L VDGG T   
Sbjct: 218 ----PEDIAAAVLFLASDEARYITGQTLPVDGGATLPE 251

Length = 251

>gnl|CDD|187605 cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs

 Score =  183 bits (466), Expect = 8e-57
 Identities = 91/271 (33%), Positives = 133/271 (49%), Gaps = 28/271 (10%)

Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVH--CD 86
           L+GKVA++TG +RGIG       A  GA +VI    +         +    V      CD
Sbjct: 3   LKGKVALVTGASRGIGFGIASGLAEAGANIVINSRNEEKAEEAQQLIEKEGVEATAFTCD 62

Query: 87  VSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMA 146
           VS EE I+  + +    +G++DIL NNAG+    R+H +  +F   E+ +V+ VN+ G+ 
Sbjct: 63  VSDEEAIKAAVEAIEEDFGKIDILVNNAGI---IRRHPAE-EFPEAEWRDVIDVNLNGVF 118

Query: 147 LGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIR 206
              +  AR MI +G G II+  S+   +GG    AY ASK  + GLTK  A E  R+GI+
Sbjct: 119 FVSQAVARHMIKQGHGKIINICSLLSELGGPPVPAYAASKGGVAGLTKALATEWARHGIQ 178

Query: 207 VNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLR 266
           VN I+P   AT M            E ++ +   IP+                  G   +
Sbjct: 179 VNAIAPGYFATEMT----EAVVADPEFNDDILKRIPA------------------GRWGQ 216

Query: 267 SKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
            +D+  AA++LASD S YV+G  + VDGG  
Sbjct: 217 PEDLVGAAVFLASDASDYVNGQIIFVDGGWL 247

Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|235712 PRK06138, PRK06138, short chain dehydrogenase; Provisional

 Score =  176 bits (447), Expect = 6e-54
 Identities = 104/273 (38%), Positives = 146/273 (53%), Gaps = 23/273 (8%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVH-CD 86
           RL G+VAI+TG   GIG A  +LFAR GA+VV+AD +      +A+ +A     F    D
Sbjct: 2   RLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGD 61

Query: 87  VSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMA 146
           V   E +E L++   +R+GRLD+L NNAG          ++  D  ++D VMRVNV G+ 
Sbjct: 62  VGSAEAVEALVDFVAARWGRLDVLVNNAGFGCGGT----VVTTDEADWDAVMRVNVGGVF 117

Query: 147 LGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIR 206
           L  K+A  +M  +GGG I++TAS   + GG G  AY ASK AI  LT+  A +    GIR
Sbjct: 118 LWAKYAIPIMQRQGGGSIVNTASQLALAGGRGRAAYVASKGAIASLTRAMALDHATDGIR 177

Query: 207 VNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLR 266
           VN ++P  + T      +    D E   E +            M  F        GT   
Sbjct: 178 VNAVAPGTIDTPYFRRIFARHADPEALREALR-------ARHPMNRF--------GT--- 219

Query: 267 SKDIAEAALYLASDESRYVSGHNLVVDGGVTTS 299
           ++++A+AAL+LASDES + +G  LVVDGG   +
Sbjct: 220 AEEVAQAALFLASDESSFATGTTLVVDGGWLAA 252

Length = 252

>gnl|CDD|187591 cd05330, cyclohexanol_reductase_SDR_c, cyclohexanol reductases, including levodione reductase, classical (c) SDRs

 Score =  175 bits (446), Expect = 9e-54
 Identities = 98/268 (36%), Positives = 150/268 (55%), Gaps = 23/268 (8%)

Query: 32  KVAIITGGARGIGEAAVRLFARHGAKVVIADV-EDTLGSVLASTLAPAP---VTFVHCDV 87
           KV +ITGG  G+G A     A+ GAK+ + D+ E+ L +  A+ L  AP   V  +  DV
Sbjct: 4   KVVLITGGGSGLGLATAVRLAKEGAKLSLVDLNEEGLEAAKAALLEIAPDAEVLLIKADV 63

Query: 88  SLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMAL 147
           S E  +E  +++TV ++GR+D  +NNAG+ G Q       DF ADEFD V+ +N++G+  
Sbjct: 64  SDEAQVEAYVDATVEQFGRIDGFFNNAGIEGKQ---NLTEDFGADEFDKVVSINLRGVFY 120

Query: 148 GIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRV 207
           G++   +VM  +G G I++TASV G+ G      Y A+KH +VGLT+N+A E G+YGIR+
Sbjct: 121 GLEKVLKVMREQGSGMIVNTASVGGIRGVGNQSGYAAAKHGVVGLTRNSAVEYGQYGIRI 180

Query: 208 NCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRS 267
           N I+P  + T M+  + +  G  E  +E               EEFVS   N        
Sbjct: 181 NAIAPGAILTPMVEGSLKQLG-PENPEEA-------------GEEFVS--VNPMKRFGEP 224

Query: 268 KDIAEAALYLASDESRYVSGHNLVVDGG 295
           +++A    +L SD++ YV+   + +DGG
Sbjct: 225 EEVAAVVAFLLSDDAGYVNAAVVPIDGG 252

Cyloclohexanol reductases,including (6R)-2,2,6-trimethyl-1,4-cyclohexanedione (levodione) reductase of Corynebacterium aquaticum, catalyze the reversible oxidoreduction of hydroxycyclohexanone derivatives. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|187594 cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs

 Score =  174 bits (444), Expect = 1e-53
 Identities = 85/266 (31%), Positives = 130/266 (48%), Gaps = 30/266 (11%)

Query: 32  KVAIITGGARGIGEAAVRLFARHGAKVVIADV--EDTLGSVLASTLAPAPVTFVHCDVSL 89
           KVA++TG +RGIG A     A  GAKV + D   E    +V            +  DVS 
Sbjct: 1   KVALVTGASRGIGRAIALRLAAEGAKVAVTDRSEEAAAETVEEIKALGGNAAALEADVSD 60

Query: 90  EEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGI 149
            E +E L+    + +G +DIL NNAG+     +   ++    +++D V+ VN+ G+    
Sbjct: 61  REAVEALVEKVEAEFGPVDILVNNAGIT----RDNLLMRMSEEDWDAVINVNLTGVFNVT 116

Query: 150 KHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNC 209
           +   R MI R  G II+ +SV G++G  G   Y ASK  ++G TK+ A EL   GI VN 
Sbjct: 117 QAVIRAMIKRRSGRIINISSVVGLIGNPGQANYAASKAGVIGFTKSLAKELASRGITVNA 176

Query: 210 ISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSKD 269
           ++P  + T M                        +K   K+ + +  LG L GT    ++
Sbjct: 177 VAPGFIDTDMTDA-------------------LPEKVKEKILKQIP-LGRL-GT---PEE 212

Query: 270 IAEAALYLASDESRYVSGHNLVVDGG 295
           +A A  +LASD++ Y++G  L V+GG
Sbjct: 213 VANAVAFLASDDASYITGQVLHVNGG 238

This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 240

>gnl|CDD|180993 PRK07478, PRK07478, short chain dehydrogenase; Provisional

 Score =  174 bits (444), Expect = 2e-53
 Identities = 106/276 (38%), Positives = 143/276 (51%), Gaps = 28/276 (10%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVI-ADVEDTLGSVLAS-TLAPAPVTFVHC 85
           RL GKVAIITG + GIG AA +LFAR GAKVV+ A  +  L  ++A           +  
Sbjct: 3   RLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAG 62

Query: 86  DVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGM 145
           DV  E   + L+   V R+G LDI +NNAG LG       + +   + +   +  N+   
Sbjct: 63  DVRDEAYAKALVALAVERFGGLDIAFNNAGTLGEM---GPVAEMSLEGWRETLATNLTSA 119

Query: 146 ALGIKHAARVMINRGGGCIISTASVAGVMGGL-GPHAYTASKHAIVGLTKNAACELGRYG 204
            LG KH    M+ RGGG +I T++  G   G  G  AY ASK  ++GLT+  A E G  G
Sbjct: 120 FLGAKHQIPAMLARGGGSLIFTSTFVGHTAGFPGMAAYAASKAGLIGLTQVLAAEYGAQG 179

Query: 205 IRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT 264
           IRVN + P G  T M     R  GD  E                    FV+GL  LK   
Sbjct: 180 IRVNALLPGGTDTPM----GRAMGDTPEA-----------------LAFVAGLHALKRMA 218

Query: 265 LRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTSR 300
            + ++IA+AAL+LASD + +V+G  L+VDGGV+ +R
Sbjct: 219 -QPEEIAQAALFLASDAASFVTGTALLVDGGVSITR 253

Length = 254

>gnl|CDD|180723 PRK06841, PRK06841, short chain dehydrogenase; Provisional

 Score =  173 bits (441), Expect = 6e-53
 Identities = 103/270 (38%), Positives = 139/270 (51%), Gaps = 28/270 (10%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDV 87
            L GKVA++TGGA GIG A   LFA  GA+V + D  + +  V A  L       V CDV
Sbjct: 12  DLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQLLGGNAKGLV-CDV 70

Query: 88  SLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMAL 147
           S  + +E  + + +S +GR+DIL N+AGV        +  D   +++D  + +N+KG  L
Sbjct: 71  SDSQSVEAAVAAVISAFGRIDILVNSAGVA---LLAPAE-DVSEEDWDKTIDINLKGSFL 126

Query: 148 GIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRV 207
             +   R MI  GGG I++ AS AGV+      AY ASK  +VG+TK  A E G YGI V
Sbjct: 127 MAQAVGRHMIAAGGGKIVNLASQAGVVALERHVAYCASKAGVVGMTKVLALEWGPYGITV 186

Query: 208 NCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRS 267
           N ISP  V T +   AW       E+ E     IP+ +     E                
Sbjct: 187 NAISPTVVLTELGKKAWAG-----EKGERAKKLIPAGRFAYPEE---------------- 225

Query: 268 KDIAEAALYLASDESRYVSGHNLVVDGGVT 297
             IA AAL+LASD +  ++G NLV+DGG T
Sbjct: 226 --IAAAALFLASDAAAMITGENLVIDGGYT 253

Length = 255

>gnl|CDD|183778 PRK12829, PRK12829, short chain dehydrogenase; Provisional

 Score =  169 bits (431), Expect = 2e-51
 Identities = 94/270 (34%), Positives = 135/270 (50%), Gaps = 19/270 (7%)

Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADV-EDTLGSVLASTLAPAPVTFVHCDV 87
           L+G   ++TGGA GIG A    FA  GA+V + DV E  L +  A  L  A VT    DV
Sbjct: 9   LDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAAR-LPGAKVTATVADV 67

Query: 88  SLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMAL 147
           +    +E + ++ V R+G LD+L NNAG+ G       I +   ++++  + VN+ G   
Sbjct: 68  ADPAQVERVFDTAVERFGGLDVLVNNAGIAG---PTGGIDEITPEQWEQTLAVNLNGQFY 124

Query: 148 GIKHAARVMINRG-GGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIR 206
             + A  ++   G GG II+ +SVAG +G  G   Y ASK A+VGL K+ A ELG  GIR
Sbjct: 125 FARAAVPLLKASGHGGVIIALSSVAGRLGYPGRTPYAASKWAVVGLVKSLAIELGPLGIR 184

Query: 207 VNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLR 266
           VN I P  V    +            E      GI         +E++  +   +     
Sbjct: 185 VNAILPGIVRGPRM--------RRVIEARAQQLGIG---LDEMEQEYLEKISLGRMVEP- 232

Query: 267 SKDIAEAALYLASDESRYVSGHNLVVDGGV 296
            +DIA  AL+LAS  +RY++G  + VDG V
Sbjct: 233 -EDIAATALFLASPAARYITGQAISVDGNV 261

Length = 264

>gnl|CDD|235925 PRK07067, PRK07067, sorbitol dehydrogenase; Provisional

 Score =  169 bits (430), Expect = 3e-51
 Identities = 94/276 (34%), Positives = 141/276 (51%), Gaps = 31/276 (11%)

Query: 27  RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCD 86
            RL+GKVA++TG A GIGEA    +   GA+VVIAD++     + A  + P     V  D
Sbjct: 2   MRLQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGP-AAIAVSLD 60

Query: 87  VSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMA 146
           V+ ++ I+ ++ + V R+G +DIL+NNA +         I+D   D +D +  VNVKG+ 
Sbjct: 61  VTRQDSIDRIVAAAVERFGGIDILFNNAALFDMA----PILDISRDSYDRLFAVNVKGLF 116

Query: 147 LGIKHAARVMINRG-GGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGI 205
             ++  AR M+ +G GG II+ AS AG  G      Y A+K A++  T++AA  L R+GI
Sbjct: 117 FLMQAVARHMVEQGRGGKIINMASQAGRRGEALVSHYCATKAAVISYTQSAALALIRHGI 176

Query: 206 RVNCISPFGVATSM--LVNA----WRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGN 259
            VN I+P  V T M   V+A    + N   GE+           ++ V +          
Sbjct: 177 NVNAIAPGVVDTPMWDQVDALFARYENRPPGEK-----------KRLVGEAVPL------ 219

Query: 260 LKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
             G      D+   AL+LAS ++ Y+      VDGG
Sbjct: 220 --GRMGVPDDLTGMALFLASADADYIVAQTYNVDGG 253

Length = 257

>gnl|CDD|180371 PRK06057, PRK06057, short chain dehydrogenase; Provisional

 Score =  168 bits (428), Expect = 5e-51
 Identities = 85/272 (31%), Positives = 134/272 (49%), Gaps = 27/272 (9%)

Query: 27  RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCD 86
           +RL G+VA+ITGG  GIG A  R  A  GA VV+ D++   G   A  +      FV  D
Sbjct: 3   QRLAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVG---GLFVPTD 59

Query: 87  VSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMA 146
           V+ E+ +  L ++    YG +DI +NNAG+  +  +  SI++   D +  V  VN+  + 
Sbjct: 60  VTDEDAVNALFDTAAETYGSVDIAFNNAGI--SPPEDDSILNTGLDAWQRVQDVNLTSVY 117

Query: 147 LGIKHAARVMINRGGGCIISTASVAGVMGGLGPH-AYTASKHAIVGLTKNAACELGRYGI 205
           L  K A   M+ +G G II+TAS   VMG      +YTASK  ++ +++    +  R GI
Sbjct: 118 LCCKAALPHMVRQGKGSIINTASFVAVMGSATSQISYTASKGGVLAMSRELGVQFARQGI 177

Query: 206 RVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL 265
           RVN + P  V T +L                  F    ++  R++           G   
Sbjct: 178 RVNALCPGPVNTPLLQEL---------------FAKDPERAARRLVHVP------MGRFA 216

Query: 266 RSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
             ++IA A  +LASD++ +++    +VDGG++
Sbjct: 217 EPEEIAAAVAFLASDDASFITASTFLVDGGIS 248

Length = 255

>gnl|CDD|233590 TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier-protein) reductase

 Score =  166 bits (422), Expect = 3e-50
 Identities = 83/269 (30%), Positives = 129/269 (47%), Gaps = 37/269 (13%)

Query: 34  AIITGGARGIGEAAVRLFARHGAKVVIADV-EDTLGSVLASTL--APAPVTFVHCDVSLE 90
           A++TG +RGIG A     A+ GAKV+I     +     +   L         V CDVS  
Sbjct: 1   ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDR 60

Query: 91  EDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIK 150
           ED++ ++       G +DIL NNAG+     +   ++    +++D V+  N+ G+    +
Sbjct: 61  EDVKAVVEEIEEELGPIDILVNNAGI----TRDNLLMRMKEEDWDAVIDTNLTGVFNLTQ 116

Query: 151 HAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCI 210
              R+MI +  G II+ +SV G+MG  G   Y ASK  ++G TK+ A EL    I VN +
Sbjct: 117 AVLRIMIKQRSGRIINISSVVGLMGNAGQANYAASKAGVIGFTKSLAKELASRNITVNAV 176

Query: 211 SPFGVATSM---LVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRS 267
           +P  + T M   L          E+  + +   IP              LG   GT    
Sbjct: 177 APGFIDTDMTDKL---------SEKVKKKILSQIP--------------LGRF-GT---P 209

Query: 268 KDIAEAALYLASDESRYVSGHNLVVDGGV 296
           +++A A  +LASDE+ Y++G  + VDGG+
Sbjct: 210 EEVANAVAFLASDEASYITGQVIHVDGGM 238

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|187626 cd05368, DHRS6_like_SDR_c, human DHRS6-like, classical (c) SDRs

 Score =  166 bits (421), Expect = 3e-50
 Identities = 92/269 (34%), Positives = 134/269 (49%), Gaps = 30/269 (11%)

Query: 30  EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSL 89
           +GKVA+IT  A+GIG A    FAR GA V+  D+ +     L        +T    DV+ 
Sbjct: 1   DGKVALITAAAQGIGRAIALAFAREGANVIATDINEEK---LKELERGPGITTRVLDVTD 57

Query: 90  EEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGI 149
           +E +  L        GR+D+L+N AG +     H SI+D + D++D  M +NV+ M L I
Sbjct: 58  KEQVAALAK----EEGRIDVLFNCAGFV----HHGSILDCEDDDWDFAMNLNVRSMYLMI 109

Query: 150 KHAARVMINRGGGCIISTASVAGVMGGL-GPHAYTASKHAIVGLTKNAACELGRYGIRVN 208
           K     M+ R  G II+ +SVA  + G+     Y+ +K A++GLTK+ A +  + GIR N
Sbjct: 110 KAVLPKMLARKDGSIINMSSVASSIKGVPNRFVYSTTKAAVIGLTKSVAADFAQQGIRCN 169

Query: 209 CISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSK 268
            I P  V T  L    +   D E              E  K   F +      G     +
Sbjct: 170 AICPGTVDTPSLEERIQAQPDPE--------------EALK--AFAA--RQPLGRLATPE 211

Query: 269 DIAEAALYLASDESRYVSGHNLVVDGGVT 297
           ++A  A+YLASDES YV+G  +V+DGG +
Sbjct: 212 EVAALAVYLASDESAYVTGTAVVIDGGWS 240

Human DHRS6, and similar proteins. These proteins are classical SDRs, with a canonical active site tetrad and a close match to the typical Gly-rich NAD-binding motif. Human DHRS6 is a cytosolic type 2 (R)-hydroxybutyrate dehydrogenase, which catalyses the conversion of (R)-hydroxybutyrate to acetoacetate. Also included in this subgroup is Escherichia coli UcpA (upstream cys P). Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Note: removed : needed to make this chiodl smaller when drew final trees: rmeoved text form description: Other proteins in this subgroup include Thermoplasma acidophilum aldohexose dehydrogenase, which has high dehydrogenase activity against D-mannose, Bacillus subtilis BacC involved in the biosynthesis of the dipeptide bacilysin and its antibiotic moiety anticapsin, Sphingomonas paucimobilis strain B90 LinC, involved in the degradation of hexachlorocyclohexane isomers...... P). Length = 241

>gnl|CDD|183833 PRK12939, PRK12939, short chain dehydrogenase; Provisional

 Score =  165 bits (419), Expect = 8e-50
 Identities = 84/270 (31%), Positives = 122/270 (45%), Gaps = 29/270 (10%)

Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPA--PVTFVHCD 86
           L GK A++TG ARG+G A     A  GA V   D        LA+ L  A      +  D
Sbjct: 5   LAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAAD 64

Query: 87  VSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMA 146
           ++    ++   ++  +  G LD L NNAG+       KS  + D D +D VM VNV+G  
Sbjct: 65  LADPASVQRFFDAAAAALGGLDGLVNNAGIT----NSKSATELDIDTWDAVMNVNVRGTF 120

Query: 147 LGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIR 206
           L ++ A   + + G G I++ AS   + G     AY ASK A++G+T++ A ELG  GI 
Sbjct: 121 LMLRAALPHLRDSGRGRIVNLASDTALWGAPKLGAYVASKGAVIGMTRSLARELGGRGIT 180

Query: 207 VNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLR 266
           VN I+P   AT             +E       G   ++                     
Sbjct: 181 VNAIAPGLTATEATAY-----VPADERHAYYLKGRALERL---------------QVP-- 218

Query: 267 SKDIAEAALYLASDESRYVSGHNLVVDGGV 296
             D+A A L+L SD +R+V+G  L V+GG 
Sbjct: 219 -DDVAGAVLFLLSDAARFVTGQLLPVNGGF 247

Length = 250

>gnl|CDD|234422 TIGR03971, SDR_subfam_1, oxidoreductase, SDR family

 Score =  164 bits (417), Expect = 2e-49
 Identities = 98/284 (34%), Positives = 134/284 (47%), Gaps = 36/284 (12%)

Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAP--------- 79
           LEGKVA ITG ARG G A     A  GA ++  D+   L       LA            
Sbjct: 1   LEGKVAFITGAARGQGRAHAVRLAAEGADIIAIDLCAPLSDYPTYPLATREDLDETARLV 60

Query: 80  ------VTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADE 133
                 V     DV    ++  ++   V ++GRLD++  NAGVL   R      +   ++
Sbjct: 61  EALGRKVLARKADVRDLAEVRAVVEDGVEQFGRLDVVVANAGVLSYGRSW----ELSEEQ 116

Query: 134 FDNVMRVNVKGMALGIKHAARVMINRG-GGCIISTASVAGVMGGLGPHAYTASKHAIVGL 192
           +D V+ +N+ G+    K     MI RG GG II T+SVAG+    G   Y A+KH +VGL
Sbjct: 117 WDTVLDINLTGVWRTCKAVVPHMIERGNGGSIIITSSVAGLKALPGLAHYAAAKHGLVGL 176

Query: 193 TKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEE 252
           TK  A EL  YGIRVN I P+ V T M+             +      +   +  R    
Sbjct: 177 TKTLANELAEYGIRVNSIHPYSVDTPMI-----------APEAMREAFLKYPEAAR---A 222

Query: 253 FVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGV 296
           F+  L       +  +D+A+A L+LASDESRY++GH L VD G 
Sbjct: 223 FMPAL--PVSGFVPPEDVADAVLWLASDESRYITGHQLPVDAGA 264

Members of this protein subfamily are putative oxidoreductases belonging to the larger SDR family. Members of the present subfamily may occur several to a genome and are largely restricted to genomes that contain members of families TIGR03962, TIGR03967, and TIGR03969. Many members have been annotated by homology as carveol dehydrogenases. Length = 265

>gnl|CDD|187648 cd08944, SDR_c12, classical (c) SDR, subgroup 12

 Score =  163 bits (414), Expect = 4e-49
 Identities = 95/267 (35%), Positives = 139/267 (52%), Gaps = 21/267 (7%)

Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVS 88
           LEGKVAI+TG   GIG A     AR GA+VV+AD++      + + +A   +  +  DV+
Sbjct: 1   LEGKVAIVTGAGAGIGAACAARLAREGARVVVADIDGGAAQAVVAQIAGGALA-LRVDVT 59

Query: 89  LEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALG 148
            E+ +  L    V  +G LD+L NNAG +       +IID D   +D  M +N++G  L 
Sbjct: 60  DEQQVAALFERAVEEFGGLDLLVNNAGAM---HLTPAIIDTDLAVWDQTMAINLRGTFLC 116

Query: 149 IKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVN 208
            +HAA  MI RGGG I++ +S+AG  G  G  AY ASK AI  LT+  A EL   GIR N
Sbjct: 117 CRHAAPRMIARGGGSIVNLSSIAGQSGDPGYGAYGASKAAIRNLTRTLAAELRHAGIRCN 176

Query: 209 CISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSK 268
            ++P  + T +L+          +         P          F   +  L+G   R +
Sbjct: 177 ALAPGLIDTPLLLA---------KLAGFEGALGPGG--------FHLLIHQLQGRLGRPE 219

Query: 269 DIAEAALYLASDESRYVSGHNLVVDGG 295
           D+A A ++L SD++ +++G  L VDGG
Sbjct: 220 DVAAAVVFLLSDDASFITGQVLCVDGG 246

These are classical SDRs, with the canonical active site tetrad and glycine-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 246

>gnl|CDD|187610 cd05352, MDH-like_SDR_c, mannitol dehydrogenase (MDH)-like, classical (c) SDRs

 Score =  162 bits (412), Expect = 1e-48
 Identities = 88/277 (31%), Positives = 130/277 (46%), Gaps = 35/277 (12%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLA---PAPVTFVH 84
            L+GKVAI+TGG+RGIG A  R  A  GA V I           A  LA           
Sbjct: 5   SLKGKVAIVTGGSRGIGLAIARALAEAGADVAIIYNSAPRAEEKAEELAKKYGVKTKAYK 64

Query: 85  CDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKG 144
           CDVS +E +E         +G++DIL  NAG+      HK  +D+  ++++ V+ VN+ G
Sbjct: 65  CDVSSQESVEKTFKQIQKDFGKIDILIANAGI----TVHKPALDYTYEQWNKVIDVNLNG 120

Query: 145 MALGIKHAARVMINRGGGCIISTASVAGVMGGLGPH--AYTASKHAIVGLTKNAACELGR 202
           +    + AA++   +G G +I TAS++G +        AY ASK A++ L K+ A E  +
Sbjct: 121 VFNCAQAAAKIFKKQGKGSLIITASMSGTIVNRPQPQAAYNASKAAVIHLAKSLAVEWAK 180

Query: 203 YGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMN-FGIPSQKEVRKMEEFVSGLGNLK 261
           Y IRVN ISP  + T +     +      E    +    +P                   
Sbjct: 181 YFIRVNSISPGYIDTDLTDFVDKELRKKWESYIPLKRIALP------------------- 221

Query: 262 GTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT 298
                 +++  A LYLASD S Y +G +L++DGG T 
Sbjct: 222 ------EELVGAYLYLASDASSYTTGSDLIIDGGYTC 252

NADP-mannitol dehydrogenase catalyzes the conversion of fructose to mannitol, an acyclic 6-carbon sugar. MDH is a tetrameric member of the SDR family. This subgroup also includes various other tetrameric SDRs, including Pichia stipitis D-arabinitol dehydrogenase (aka polyol dehydrogenase), Candida albicans Sou1p, a sorbose reductase, and Candida parapsilosis (S)-specific carbonyl reductase (SCR, aka S-specific alcohol dehydrogenase) which catalyzes the enantioselective reduction of 2-hydroxyacetophenone into (S)-1-phenyl-1,2-ethanediol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 252

>gnl|CDD|187622 cd05364, SDR_c11, classical (c) SDR, subgroup 11

 Score =  161 bits (409), Expect = 2e-48
 Identities = 90/272 (33%), Positives = 138/272 (50%), Gaps = 28/272 (10%)

Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVI-----ADVEDTLGSVLASTLAPAPVTFV 83
           L GKVAIITG + GIG     LFAR GA++ +       +E+T  S L + ++   +  V
Sbjct: 1   LSGKVAIITGSSSGIGAGTAILFARLGARLALTGRDAERLEETRQSCLQAGVSEKKILLV 60

Query: 84  HCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVK 143
             D++ EE  + +I++T++++GRLDIL NNAG+L          D D +E+D VM +N++
Sbjct: 61  VADLTEEEGQDRIISTTLAKFGRLDILVNNAGILAKG----GGEDQDIEEYDKVMNLNLR 116

Query: 144 GMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRY 203
              + +   A   + +  G I++ +SVAG     G   Y  SK A+   T+  A EL   
Sbjct: 117 A-VIYLTKLAVPHLIKTKGEIVNVSSVAGGRSFPGVLYYCISKAALDQFTRCTALELAPK 175

Query: 204 GIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGT 263
           G+RVN +SP  + T       R  G  EE+           K + + +E         G 
Sbjct: 176 GVRVNSVSPGVIVT----GFHRRMGMPEEQ---------YIKFLSRAKETHP-----LGR 217

Query: 264 TLRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
                ++AEA  +LASD S +++G  L VDGG
Sbjct: 218 PGTVDEVAEAIAFLASDASSFITGQLLPVDGG 249

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 253

>gnl|CDD|187624 cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol dehydrogenase-like, classical (c) SDRs

 Score =  159 bits (405), Expect = 1e-47
 Identities = 92/273 (33%), Positives = 134/273 (49%), Gaps = 29/273 (10%)

Query: 31  GKVAIITGGARGIGEAAVRLFARHGAKVVIADV--EDTLGSVLASTLAPAPVT--FVHCD 86
            KVAIITG A+GIG A     A  G  +V+AD+  E+   S     ++ A      V  D
Sbjct: 2   SKVAIITGAAQGIGRAIAERLAADGFNIVLADLNLEEAAKST-IQEISEAGYNAVAVGAD 60

Query: 87  VSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMA 146
           V+ ++D+E LI+  V ++G  D++ NNAG+         ++    ++   V  VNV G+ 
Sbjct: 61  VTDKDDVEALIDQAVEKFGSFDVMVNNAGIAPIT----PLLTITEEDLKKVYAVNVFGVL 116

Query: 147 LGIKHAARVMINRG-GGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGI 205
            GI+ AAR     G GG II+ +S+AGV G     AY+ASK A+ GLT+ AA EL   GI
Sbjct: 117 FGIQAAARQFKKLGHGGKIINASSIAGVQGFPNLGAYSASKFAVRGLTQTAAQELAPKGI 176

Query: 206 RVNCISPFGVATSM---LVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKG 262
            VN  +P  V T M   +           E +                 EF S +    G
Sbjct: 177 TVNAYAPGIVKTEMWDYIDEEVGEIAGKPEGE--------------GFAEFSSSI--PLG 220

Query: 263 TTLRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
                +D+A    +LAS++S Y++G  ++VDGG
Sbjct: 221 RLSEPEDVAGLVSFLASEDSDYITGQTILVDGG 253

2,3-butanediol dehydrogenases (BDHs) catalyze the NAD+ dependent conversion of 2,3-butanediol to acetonin; BDHs are classified into types according to their stereospecificity as to substrates and products. Included in this subgroup are Klebsiella pneumonia meso-BDH which catalyzes meso-2,3-butanediol to D(-)-acetonin, and Corynebacterium glutamicum L-BDH which catalyzes lX+)-2,3-butanediol to L(+)-acetonin. This subgroup is comprised of classical SDRs with the characteristic catalytic triad and NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|181295 PRK08213, PRK08213, gluconate 5-dehydrogenase; Provisional

 Score =  158 bits (402), Expect = 5e-47
 Identities = 95/281 (33%), Positives = 136/281 (48%), Gaps = 43/281 (15%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVI-ADVEDTLGSVLASTLAPAPVT--FVH 84
            L GK A++TGG+RG+G          GA+VV+ A   + L    A  L    +   ++ 
Sbjct: 9   DLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAA-HLEALGIDALWIA 67

Query: 85  CDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKG 144
            DV+ E DIE L   T+ R+G +DIL NNAG            D   + +D VM +NV+G
Sbjct: 68  ADVADEADIERLAEETLERFGHVDILVNNAGATWGA----PAEDHPVEAWDKVMNLNVRG 123

Query: 145 MALGIKHAARV-MINRGGGCIISTASVAGVMGG----LGPHAYTASKHAIVGLTKNAACE 199
           + L  +  A+  MI RG G II+ ASVAG+ G     +   AY  SK A++  T+  A E
Sbjct: 124 LFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPEVMDTIAYNTSKGAVINFTRALAAE 183

Query: 200 LGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSG--- 256
            G +GIRVN I+P    T M                       ++  + ++ E +     
Sbjct: 184 WGPHGIRVNAIAPGFFPTKM-----------------------TRGTLERLGEDLLAHTP 220

Query: 257 LGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
           LG L        D+  AAL LASD S++++G  L VDGGV+
Sbjct: 221 LGRLGDDE----DLKGAALLLASDASKHITGQILAVDGGVS 257

Length = 259

>gnl|CDD|211705 TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase

 Score =  157 bits (400), Expect = 7e-47
 Identities = 89/270 (32%), Positives = 141/270 (52%), Gaps = 20/270 (7%)

Query: 31  GKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVH--CDVS 88
           GK A++TG A GIG A  R  A  GA VV+ D  +      A     A  + ++   DV+
Sbjct: 1   GKTALVTGAASGIGLAIARALAAAGANVVVNDFGEEGAEAAAKVAGDAGGSVIYLPADVT 60

Query: 89  LEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSII-DFDADEFDNVMRVNVKGMAL 147
            E++I ++I +  + +G LDIL NNAG+     +H + I +F  +++D ++ V +     
Sbjct: 61  KEDEIADMIAAAAAEFGGLDILVNNAGI-----QHVAPIEEFPPEDWDRIIAVMLTSAFH 115

Query: 148 GIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRV 207
            I+ A   M  +G G II+ AS  G++      AY A+KH ++GLTK  A E+  +GI V
Sbjct: 116 TIRAALPHMKKQGWGRIINIASAHGLVASPFKSAYVAAKHGLIGLTKVLALEVAEHGITV 175

Query: 208 NCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRS 267
           N I P  V T ++        + +  D+    GIP ++ +R+    V   G      +  
Sbjct: 176 NAICPGYVRTPLV--------EKQIADQAKTRGIPEEQVIRE----VMLKGQPTKRFVTV 223

Query: 268 KDIAEAALYLASDESRYVSGHNLVVDGGVT 297
            ++AE ALYLASD +  ++G  +V+DGG T
Sbjct: 224 DEVAETALYLASDAAAQITGQAIVLDGGWT 253

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. Length = 255

>gnl|CDD|181491 PRK08589, PRK08589, short chain dehydrogenase; Validated

 Score =  157 bits (399), Expect = 1e-46
 Identities = 88/271 (32%), Positives = 149/271 (54%), Gaps = 23/271 (8%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLG-SVLASTLAPAPVTFVHCD 86
           RLE KVA+ITG + GIG+A+    A+ GA V+  D+ + +  +V             H D
Sbjct: 3   RLENKVAVITGASTGIGQASAIALAQEGAYVLAVDIAEAVSETVDKIKSNGGKAKAYHVD 62

Query: 87  VSLEEDIENLINSTVSRYGRLDILYNNAGV-LGNQRKHKSIIDFDADEFDNVMRVNVKGM 145
           +S E+ +++  +    ++GR+D+L+NNAGV     R H+  +D     FD +M V+++G 
Sbjct: 63  ISDEQQVKDFASEIKEQFGRVDVLFNNAGVDNAAGRIHEYPVDV----FDKIMAVDMRGT 118

Query: 146 ALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGI 205
            L  K    +M+ +GG  II+T+S +G    L    Y A+K A++  TK+ A E GR GI
Sbjct: 119 FLMTKMLLPLMMEQGGS-IINTSSFSGQAADLYRSGYNAAKGAVINFTKSIAIEYGRDGI 177

Query: 206 RVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL 265
           R N I+P  + T ++         G  EDE       + K  R+ +++++ LG L     
Sbjct: 178 RANAIAPGTIETPLVDKL-----TGTSEDE-------AGKTFRENQKWMTPLGRLG---- 221

Query: 266 RSKDIAEAALYLASDESRYVSGHNLVVDGGV 296
           + +++A+  ++LASD+S +++G  + +DGGV
Sbjct: 222 KPEEVAKLVVFLASDDSSFITGETIRIDGGV 252

Length = 272

>gnl|CDD|131468 TIGR02415, 23BDH, acetoin reductases

 Score =  156 bits (396), Expect = 3e-46
 Identities = 91/267 (34%), Positives = 136/267 (50%), Gaps = 20/267 (7%)

Query: 32  KVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPA--PVTFVHCDVSL 89
           KVA++TGGA+GIG+      A+ G  V +AD+ +      A  +  A         DVS 
Sbjct: 1   KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSD 60

Query: 90  EEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGI 149
           ++ + + I+    ++G  D++ NNAGV         I++   +E   V  VNVKG+  GI
Sbjct: 61  KDQVFSAIDQAAEKFGGFDVMVNNAGV----APITPILEITEEELKKVYNVNVKGVLFGI 116

Query: 150 KHAARVMINRG-GGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVN 208
           + AAR    +G GG II+ AS+AG  G     AY+++K A+ GLT+ AA EL   GI VN
Sbjct: 117 QAAARQFKKQGHGGKIINAASIAGHEGNPILSAYSSTKFAVRGLTQTAAQELAPKGITVN 176

Query: 209 CISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSK 268
              P  V T M    W    +  +E+     G P        EEF S +    G     +
Sbjct: 177 AYCPGIVKTPM----W----EEIDEETSEIAGKP---IGEGFEEFSSEIA--LGRPSEPE 223

Query: 269 DIAEAALYLASDESRYVSGHNLVVDGG 295
           D+A    +LAS++S Y++G +++VDGG
Sbjct: 224 DVAGLVSFLASEDSDYITGQSILVDGG 250

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PMID:11577733) [Energy metabolism, Fermentation]. Length = 254

>gnl|CDD|187616 cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (GlcDH), classical (c) SDRs

 Score =  154 bits (392), Expect = 8e-46
 Identities = 90/275 (32%), Positives = 135/275 (49%), Gaps = 34/275 (12%)

Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVI-----ADVEDTLGSVLASTLAPAPVTFV 83
           L+GKVA++TG + GIG+A     A  GA VV+      D  + +  V            V
Sbjct: 1   LKGKVALVTGASSGIGKAIAIRLATAGANVVVNYRSKEDAAEEV--VEEIKAVGGKAIAV 58

Query: 84  HCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVK 143
             DVS EED+  L  S +  +G LDIL NNAG+    +   S  +   ++++ V+ VN+ 
Sbjct: 59  QADVSKEEDVVALFQSAIKEFGTLDILVNNAGL----QGDASSHEMTLEDWNKVIDVNLT 114

Query: 144 GMALGIKHAARVMI-NRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGR 202
           G  L  + A +    ++  G II+ +SV   +   G   Y ASK  +  +TK  A E   
Sbjct: 115 GQFLCAREAIKRFRKSKIKGKIINMSSVHEKIPWPGHVNYAASKGGVKMMTKTLAQEYAP 174

Query: 203 YGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKG 262
            GIRVN I+P  + T +   AW    D E+  + ++  IP    + ++ E          
Sbjct: 175 KGIRVNAIAPGAINTPINAEAW---DDPEQRADLLSL-IP----MGRIGE---------- 216

Query: 263 TTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
                ++IA AA +LASDE+ YV+G  L VDGG+T
Sbjct: 217 ----PEEIAAAAAWLASDEASYVTGTTLFVDGGMT 247

GlcDH, is a tetrameric member of the SDR family, it catalyzes the NAD(P)-dependent oxidation of beta-D-glucose to D-glucono-delta-lactone. GlcDH has a typical NAD-binding site glycine-rich pattern as well as the canonical active site tetrad (YXXXK motif plus upstream Ser and Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|236241 PRK08324, PRK08324, short chain dehydrogenase; Validated

 Score =  163 bits (414), Expect = 2e-45
 Identities = 86/277 (31%), Positives = 131/277 (47%), Gaps = 20/277 (7%)

Query: 24  PSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPA-PVTF 82
           P  + L GKVA++TG A GIG+A  +  A  GA VV+AD+++      A+ L        
Sbjct: 415 PKPKPLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPDRALG 474

Query: 83  VHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNV 142
           V CDV+ E  ++         +G +DI+ +NAG+  +      I +   +++     VN 
Sbjct: 475 VACDVTDEAAVQAAFEEAALAFGGVDIVVSNAGIAISGP----IEETSDEDWRRSFDVNA 530

Query: 143 KGMALGIKHAARVMINRG-GGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELG 201
            G  L  + A R+M  +G GG I+  AS   V  G    AY A+K A + L +  A ELG
Sbjct: 531 TGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPGPNFGAYGAAKAAELHLVRQLALELG 590

Query: 202 RYGIRVNCISPFGV--ATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGN 259
             GIRVN ++P  V   + +    W        E     +G+       ++EEF     N
Sbjct: 591 PDGIRVNGVNPDAVVRGSGIWTGEWI-------EARAAAYGLS----EEELEEFYRA-RN 638

Query: 260 LKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGV 296
           L    +  +D+AEA ++LAS      +G  + VDGG 
Sbjct: 639 LLKREVTPEDVAEAVVFLASGLLSKTTGAIITVDGGN 675

Length = 681

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score =  160 bits (406), Expect = 2e-45
 Identities = 96/272 (35%), Positives = 138/272 (50%), Gaps = 25/272 (9%)

Query: 27  RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCD 86
            + + +V ++TG A GIG AA + FAR G +VV+AD         A +L P        D
Sbjct: 1   SKAQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALA-MD 59

Query: 87  VSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMA 146
           VS E  I          +GR+D+L NNAGV        + +D   +EF  +  +N+ G  
Sbjct: 60  VSDEAQIREGFEQLHREFGRIDVLVNNAGVTD--PTMTATLDTTLEEFARLQAINLTGAY 117

Query: 147 LGIKHAARVMINRG-GGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGI 205
           L  + A R+MI +G G  I++ AS AG++      AY+ASK A++ LT++ ACE    GI
Sbjct: 118 LVAREALRLMIEQGHGAAIVNVASGAGLVALPKRTAYSASKAAVISLTRSLACEWAAKGI 177

Query: 206 RVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL 265
           RVN + P  V T M+    R    G+ +   +   IP              LG L     
Sbjct: 178 RVNAVLPGYVRTQMVAELER---AGKLDPSAVRSRIP--------------LGRLG---- 216

Query: 266 RSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
           R ++IAEA  +LASD++ Y++G  LVVDGG T
Sbjct: 217 RPEEIAEAVFFLASDQASYITGSTLVVDGGWT 248

Length = 520

>gnl|CDD|226674 COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

 Score =  147 bits (374), Expect = 4e-43
 Identities = 84/253 (33%), Positives = 121/253 (47%), Gaps = 29/253 (11%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIAD-VEDTLGSVLASTLAPAPVTFVHCD 86
            L+GKVA+ITG + GIGEA  R  A  GAKVV+A   E+ L + LA  +       +  D
Sbjct: 3   TLKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEA-LADEIGAGAALALALD 61

Query: 87  VSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMA 146
           V+    +E  I +    +GR+DIL NNAG+         + + D D++D ++  NVKG+ 
Sbjct: 62  VTDRAAVEAAIEALPEEFGRIDILVNNAGLALGDP----LDEADLDDWDRMIDTNVKGLL 117

Query: 147 LGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIR 206
            G +     M+ R  G II+  S+AG     G   Y A+K A+   +     EL   GIR
Sbjct: 118 NGTRAVLPGMVERKSGHIINLGSIAGRYPYPGGAVYGATKAAVRAFSLGLRQELAGTGIR 177

Query: 207 VNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLR 266
           V  ISP G+  +   +  R  GD E                 + ++   G     GT L 
Sbjct: 178 VTVISP-GLVETTEFSTVRFEGDDE-----------------RADKVYKG-----GTALT 214

Query: 267 SKDIAEAALYLAS 279
            +DIAEA L+ A+
Sbjct: 215 PEDIAEAVLFAAT 227

Length = 246

>gnl|CDD|180617 PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  147 bits (372), Expect = 6e-43
 Identities = 79/270 (29%), Positives = 123/270 (45%), Gaps = 38/270 (14%)

Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVS 88
              K  +ITG A GIG A  R F   GA+V   D +D                F+  D+S
Sbjct: 3   FMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQD-------KPDLSGNFHFLQLDLS 55

Query: 89  LEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALG 148
             +D+E L +        +DIL N AG+L +   +K ++D   +E+ ++   N+    L 
Sbjct: 56  --DDLEPLFDWV----PSVDILCNTAGILDD---YKPLLDTSLEEWQHIFDTNLTSTFLL 106

Query: 149 IKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVN 208
            +     M+ R  G II+  S+A  + G G  AYTASKHA+ G TK  A +  + GI+V 
Sbjct: 107 TRAYLPQMLERKSGIIINMCSIASFVAGGGGAAYTASKHALAGFTKQLALDYAKDGIQVF 166

Query: 209 CISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSK 268
            I+P  V T M       + D E                  + ++V+    +K      +
Sbjct: 167 GIAPGAVKTPM------TAADFEPG---------------GLADWVARETPIKRWA-EPE 204

Query: 269 DIAEAALYLASDESRYVSGHNLVVDGGVTT 298
           ++AE  L+LAS ++ Y+ G  + +DGG T 
Sbjct: 205 EVAELTLFLASGKADYMQGTIVPIDGGWTL 234

Length = 235

>gnl|CDD|187620 cd05362, THN_reductase-like_SDR_c, tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs

 Score =  147 bits (373), Expect = 6e-43
 Identities = 87/275 (31%), Positives = 124/275 (45%), Gaps = 38/275 (13%)

Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVI------ADVEDTLGSVLASTLAPAPVTF 82
           L GKVA++TG +RGIG A  +  AR GA VV+      A  E+ +  + A   A      
Sbjct: 1   LAGKVALVTGASRGIGRAIAKRLARDGASVVVNYASSKAAAEEVVAEIEA---AGGKAIA 57

Query: 83  VHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNV 142
           V  DVS    +  L ++    +G +DIL NNAGV+      K I +   +EFD +  VN 
Sbjct: 58  VQADVSDPSQVARLFDAAEKAFGGVDILVNNAGVM----LKKPIAETSEEEFDRMFTVNT 113

Query: 143 KGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGR 202
           KG    ++ AA+ +  R GG II+ +S           AY  SK A+   T+  A ELG 
Sbjct: 114 KGAFFVLQEAAKRL--RDGGRIINISSSLTAAYTPNYGAYAGSKAAVEAFTRVLAKELGG 171

Query: 203 YGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKG 262
            GI VN ++P  V T M                         +E  +    +S LG L  
Sbjct: 172 RGITVNAVAPGPVDTDMFYAG-------------------KTEEAVEGYAKMSPLGRLG- 211

Query: 263 TTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
                +DIA    +LAS + R+V+G  +  +GG  
Sbjct: 212 ---EPEDIAPVVAFLASPDGRWVNGQVIRANGGYV 243

1,3,6,8-tetrahydroxynaphthalene reductase (4HNR) of Magnaporthe grisea and the related 1,3,8-trihydroxynaphthalene reductase (3HNR) are typical members of the SDR family containing the canonical glycine rich NAD(P)-binding site and active site tetrad, and function in fungal melanin biosynthesis. This subgroup also includes an SDR from Norway spruce that may function to protect against both biotic and abitoic stress. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|187638 cd08933, RDH_SDR_c, retinal dehydrogenase-like, classical (c) SDR

 Score =  147 bits (373), Expect = 8e-43
 Identities = 93/271 (34%), Positives = 136/271 (50%), Gaps = 26/271 (9%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL---APAPVTFVH 84
           R   KV I+TGG+RGIG   VR F  +GAKVV     +  G  L S L    P    FV 
Sbjct: 6   RYADKVVIVTGGSRGIGRGIVRAFVENGAKVVFCARGEAAGQALESELNRAGPGSCKFVP 65

Query: 85  CDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKG 144
           CDV+ EEDI+ LI+ TV R+GR+D L NNAG       H++  +  A EF +++ +N+  
Sbjct: 66  CDVTKEEDIKTLISVTVERFGRIDCLVNNAGW---HPPHQTTDETSAQEFRDLLNLNLIS 122

Query: 145 MALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYG 204
             L  K+A   +    G  II+ +S+ G +G      Y A+K AI  +TK  A +  RYG
Sbjct: 123 YFLASKYALPHLRKSQGN-IINLSSLVGSIGQKQAAPYVATKGAITAMTKALAVDESRYG 181

Query: 205 IRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT 264
           +RVNCISP  + T +       + D             +   +++ E        L G  
Sbjct: 182 VRVNCISPGNIWTPLWEELAAQTPD-------------TLATIKEGEL-----AQLLGRM 223

Query: 265 LRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
               +   AAL+LA+ E+ + +G +L++ GG
Sbjct: 224 GTEAESGLAALFLAA-EATFCTGIDLLLSGG 253

These classical SDRs includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the short-chain dehydrogenases/reductase family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 261

>gnl|CDD|180439 PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydrogenase; Provisional

 Score =  146 bits (370), Expect = 3e-42
 Identities = 85/282 (30%), Positives = 138/282 (48%), Gaps = 37/282 (13%)

Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVS 88
           L+GK+ I+TGG+ GIG A V+    +GA VV AD+    G             FV  DVS
Sbjct: 7   LQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHG--GDGQHENY-----QFVPTDVS 59

Query: 89  LEEDIENLINSTVSRYGRLDILYNNAGV-----LGNQRKHKSIIDFDADEFDNVMRVNVK 143
             E++ + +   + ++GR+D L NNAG+     L +++      + +   FD +  +N K
Sbjct: 60  SAEEVNHTVAEIIEKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQK 119

Query: 144 GMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRY 203
           G+ L  +  AR M+ +  G I++ +S AG+ G  G   Y A+K A+   T++ A ELG++
Sbjct: 120 GVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGSEGQSCYAATKAALNSFTRSWAKELGKH 179

Query: 204 GIRVNCISPFGV--ATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLK 261
            IRV  ++P G+  AT +     R   + EE              V ++       G  K
Sbjct: 180 NIRVVGVAP-GILEATGL-----RTP-EYEEA-----LAYTRGITVEQLRA-----GYTK 222

Query: 262 GTTL---RS---KDIAEAALYLASDESRYVSGHNLVVDGGVT 297
            +T+   RS    ++A+   YL SD + Y++G    + GG T
Sbjct: 223 TSTIPLGRSGKLSEVADLVCYLLSDRASYITGVTTNIAGGKT 264

Length = 266

>gnl|CDD|235924 PRK07063, PRK07063, short chain dehydrogenase; Provisional

 Score =  145 bits (369), Expect = 3e-42
 Identities = 78/274 (28%), Positives = 125/274 (45%), Gaps = 30/274 (10%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLG----SVLASTLAPAPVTFV 83
           RL GKVA++TG A+GIG A  R FAR GA V +AD++  L     + +A  +A A V  V
Sbjct: 4   RLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAV 63

Query: 84  HCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVK 143
             DV+    +   + +    +G LD+L NNAG+          +    +++     V++ 
Sbjct: 64  PADVTDAASVAAAVAAAEEAFGPLDVLVNNAGI----NVFADPLAMTDEDWRRCFAVDLD 119

Query: 144 GMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHA--YTASKHAIVGLTKNAACELG 201
           G   G +     M+ RG G I++ AS       + P    Y  +KH ++GLT+    E  
Sbjct: 120 GAWNGCRAVLPGMVERGRGSIVNIASTHAFK--IIPGCFPYPVAKHGLLGLTRALGIEYA 177

Query: 202 RYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLK 261
              +RVN I+P  + T  L   W N+             +   K + + EE         
Sbjct: 178 ARNVRVNAIAPGYIETQ-LTEDWWNAQPDPAAARAETLALQPMKRIGRPEE--------- 227

Query: 262 GTTLRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
                   +A  A++LASDE+ +++   + +DGG
Sbjct: 228 --------VAMTAVFLASDEAPFINATCITIDGG 253

Length = 260

>gnl|CDD|180576 PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  144 bits (365), Expect = 1e-41
 Identities = 89/274 (32%), Positives = 134/274 (48%), Gaps = 31/274 (11%)

Query: 25  SHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVI--ADVEDTLGSVLASTLAPAPVTF 82
              R +GKVA+ITGG RGIG A    F R GAKV +     E+      A  L    V  
Sbjct: 1   YSMRFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENE-----AKELREKGVFT 55

Query: 83  VHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNV 142
           + CDV   + ++         +GR+D+L NNAG++          +FD ++++ ++++N+
Sbjct: 56  IKCDVGNRDQVKKSKEVVEKEFGRVDVLVNNAGIMYLM----PFEEFDEEKYNKMIKINL 111

Query: 143 KGMALGIKHAARVMINRGGGCIISTASVAGV-MGGLGPHAYTASKHAIVGLTKNAACELG 201
            G          ++     G I++ AS AG+     G   Y  +K  I+ LT+  A ELG
Sbjct: 112 NGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGTAAEGTTFYAITKAGIIILTRRLAFELG 171

Query: 202 RYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLK 261
           +YGIRVN ++P  V T M +                     SQ+E  K+ E       LK
Sbjct: 172 KYGIRVNAVAPGWVETDMTL------------------SGKSQEEAEKLRELFRNKTVLK 213

Query: 262 GTTLRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
            TT + +DIA   L+LASD++RY++G  +V DGG
Sbjct: 214 -TTGKPEDIANIVLFLASDDARYITGQVIVADGG 246

Length = 255

>gnl|CDD|181305 PRK08226, PRK08226, short chain dehydrogenase; Provisional

 Score =  144 bits (365), Expect = 1e-41
 Identities = 96/276 (34%), Positives = 132/276 (47%), Gaps = 30/276 (10%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAP-APVTFVHCD 86
           +L GK A+ITG  +GIGE   R+FARHGA +++ D+   +  +           T V  D
Sbjct: 3   KLTGKTALITGALQGIGEGIARVFARHGANLILLDISPEIEKLADELCGRGHRCTAVVAD 62

Query: 87  VSLEEDIENLINSTVSRYGRLDILYNNAGV--LGNQRKHKSIIDFDADEFDNVMRVNVKG 144
           V     +   I     + GR+DIL NNAGV  LG+       +D   ++ D  + +N+KG
Sbjct: 63  VRDPASVAAAIKRAKEKEGRIDILVNNAGVCRLGS------FLDMSDEDRDFHIDINIKG 116

Query: 145 MALGIKHAARVMINRGGGCIISTASVAGVM-GGLGPHAYTASKHAIVGLTKNAACELGRY 203
           +    K     MI R  G I+  +SV G M    G  AY  +K AIVGLTK+ A E  + 
Sbjct: 117 VWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTKAAIVGLTKSLAVEYAQS 176

Query: 204 GIRVNCISPFGVATSMLVNAWRNSGDGEEED--ECMNFGIPSQKEVRKMEEFVSGLGNLK 261
           GIRVN I P  V T M  +  R S   + E     M   IP ++    +E          
Sbjct: 177 GIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPLRRLADPLE---------- 226

Query: 262 GTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
                   + E A +LASDES Y++G   V+DGG T
Sbjct: 227 --------VGELAAFLASDESSYLTGTQNVIDGGST 254

Length = 263

>gnl|CDD|180761 PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score =  144 bits (364), Expect = 1e-41
 Identities = 92/273 (33%), Positives = 137/273 (50%), Gaps = 35/273 (12%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAP-----VTF 82
            L+GKVAI+TGG  G+G+      A+ GA ++I     T G+    T          VTF
Sbjct: 12  SLDGKVAIVTGGNTGLGQGYAVALAKAGADIIIT----THGTNWDETRRLIEKEGRKVTF 67

Query: 83  VHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNV 142
           V  D++  E  E ++   +  +G++DIL NNAG +    +   ++++  ++++ VM +N+
Sbjct: 68  VQVDLTKPESAEKVVKEALEEFGKIDILVNNAGTI----RRAPLLEYKDEDWNAVMDINL 123

Query: 143 KGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGR 202
             +    +  A+VM  +G G II+ AS+    GG    AYTASKH + GLTK  A EL  
Sbjct: 124 NSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGGKFVPAYTASKHGVAGLTKAFANELAA 183

Query: 203 YGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKG 262
           Y I+VN I+P  + T+   N      D    DE +   IP+    R  E           
Sbjct: 184 YNIQVNAIAPGYIKTA---NTAPIRADKNRNDEILK-RIPAG---RWGEPD--------- 227

Query: 263 TTLRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
                 D+  AA++LAS  S YV+GH L VDGG
Sbjct: 228 ------DLMGAAVFLASRASDYVNGHILAVDGG 254

Length = 258

>gnl|CDD|187627 cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reductase (TER) and 2,4-dienoyl-CoA reductase (DECR), atypical (a) SDR

 Score =  143 bits (363), Expect = 2e-41
 Identities = 86/280 (30%), Positives = 130/280 (46%), Gaps = 47/280 (16%)

Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIA--DVEDTLGSVLA-STLAPAPVTFVHC 85
           L+GKVA ITGG  GIG+A  + FA  GA V IA    E    +    S+        + C
Sbjct: 1   LKGKVAFITGGGTGIGKAIAKAFAELGASVAIAGRKPEVLEAAAEEISSATGGRAHPIQC 60

Query: 86  DVSLEEDIENLINSTVSRYGRLDILYNNAGVLGN---------QRKHKSIIDFDADEFDN 136
           DV   E +E  ++ T+  +G++DIL NNA   GN             K++ID D +   N
Sbjct: 61  DVRDPEAVEAAVDETLKEFGKIDILINNAA--GNFLAPAESLSPNGFKTVIDIDLNGTFN 118

Query: 137 VMRVNVKGMALGIKHAARVMINRGGGCIIS-TASVAGVMGGLGPHAYTASKHAIVGLTKN 195
             +      A+G     R++  + GG I++ +A+ A        H+  A+K  +  LT++
Sbjct: 119 TTK------AVGK----RLIEAKHGGSILNISATYAYTGSPFQVHS-AAAKAGVDALTRS 167

Query: 196 AACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVS 255
            A E G YGIRVN I+P  + T+             + ++ M   +P  +          
Sbjct: 168 LAVEWGPYGIRVNAIAPGPIPTT---EGMERLAPSGKSEKKMIERVPLGR---------- 214

Query: 256 GLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
                 GT    ++IA  AL+L SD + Y++G  LVVDGG
Sbjct: 215 -----LGTP---EEIANLALFLLSDAASYINGTTLVVDGG 246

TTER is a peroxisomal protein with a proposed role in fatty acid elongation. Fatty acid synthesis is known to occur in the both endoplasmic reticulum and mitochondria; peroxisomal TER has been proposed as an additional fatty acid elongation system, it reduces the double bond at C-2 as the last step of elongation. This system resembles the mitochondrial system in that acetyl-CoA is used as a carbon donor. TER may also function in phytol metabolism, reducting phytenoyl-CoA to phytanoyl-CoA in peroxisomes. DECR processes double bonds in fatty acids to increase their utility in fatty acid metabolism; it reduces 2,4-dienoyl-CoA to an enoyl-CoA. DECR is active in mitochondria and peroxisomes. This subgroup has the Gly-rich NAD-binding motif of the classical SDR family, but does not display strong identity to the canonical active site tetrad, and lacks the characteristic Tyr at the usual position. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 249

>gnl|CDD|187644 cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydrogenase (HBDH), classical (c) SDRs

 Score =  142 bits (361), Expect = 4e-41
 Identities = 83/278 (29%), Positives = 134/278 (48%), Gaps = 34/278 (12%)

Query: 31  GKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTL--GSVLASTLAPAPVTFVH--CD 86
           GKVA++TG   GIG    R  A  GA +V+    D     +V A   A   V  ++   D
Sbjct: 2   GKVALVTGSTSGIGLGIARALAAAGANIVLNGFGDAAEIEAVRAGLAAKHGVKVLYHGAD 61

Query: 87  VSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKH-KSIIDFDADEFDNVMRVNVKGM 145
           +S    IE+++     ++G +DIL NNAG+     +H   I DF  +++D ++ +N+  +
Sbjct: 62  LSKPAAIEDMVAYAQRQFGGVDILVNNAGI-----QHVAPIEDFPTEKWDAIIALNLSAV 116

Query: 146 ALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGI 205
               + A   M  +G G II+ ASV G++      AY A+KH +VGLTK  A E    G+
Sbjct: 117 FHTTRLALPHMKKQGWGRIINIASVHGLVASANKSAYVAAKHGVVGLTKVVALETAGTGV 176

Query: 206 RVNCISPFGVATSMLVNAW----RNSGDGEEE--DECMNFGIPSQKEVRKMEEFVSGLGN 259
             N I P  V T ++        + +G  +E+   E +    PS++       FV+    
Sbjct: 177 TCNAICPGWVLTPLVEKQISALAQKNGVPQEQAARELLLEKQPSKQ-------FVT---- 225

Query: 260 LKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
                   + + + A++LASD +  ++G  + VDGG T
Sbjct: 226 -------PEQLGDTAVFLASDAASQITGTAVSVDGGWT 256

DHBDH, an NAD+ -dependent enzyme, catalyzes the interconversion of D-3-hydroxybutyrate and acetoacetate. It is a classical SDR, with the canonical NAD-binding motif and active site tetrad. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|235794 PRK06398, PRK06398, aldose dehydrogenase; Validated

 Score =  142 bits (360), Expect = 5e-41
 Identities = 81/273 (29%), Positives = 135/273 (49%), Gaps = 31/273 (11%)

Query: 27  RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCD 86
             L+ KVAI+TGG++GIG+A V      G+ V+  D+++          +   V +   D
Sbjct: 2   LGLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEP---------SYNDVDYFKVD 52

Query: 87  VSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMA 146
           VS +E +   I+  +S+YGR+DIL NNAG+      + +I   + DE+D ++ VNV G+ 
Sbjct: 53  VSNKEQVIKGIDYVISKYGRIDILVNNAGI----ESYGAIHAVEEDEWDRIINVNVNGIF 108

Query: 147 LGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIR 206
           L  K+    M+ +  G II+ ASV          AY  SKHA++GLT++ A +     IR
Sbjct: 109 LMSKYTIPYMLKQDKGVIINIASVQSFAVTRNAAAYVTSKHAVLGLTRSIAVDYAPT-IR 167

Query: 207 VNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLK--GTT 264
              + P  + T +L  A             +  G   +   RK+ E+    G +      
Sbjct: 168 CVAVCPGSIRTPLLEWAAE-----------LEVGKDPEHVERKIREW----GEMHPMKRV 212

Query: 265 LRSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
            + +++A    +LASD + +++G  + VDGG+ 
Sbjct: 213 GKPEEVAYVVAFLASDLASFITGECVTVDGGLR 245

Length = 258

>gnl|CDD|187621 cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH), classical (c) SDR

 Score =  141 bits (356), Expect = 2e-40
 Identities = 90/268 (33%), Positives = 135/268 (50%), Gaps = 19/268 (7%)

Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVS 88
           L+GK A+ITG ARGIG A  + + R GA+V IAD+        A+ + PA    +  DV+
Sbjct: 1   LDGKTALITGSARGIGRAFAQAYVREGARVAIADINLEAARATAAEIGPAACA-ISLDVT 59

Query: 89  LEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALG 148
            +  I+  + + V R+G +DIL NNA +         I+D   + +D +  +NV G    
Sbjct: 60  DQASIDRCVAALVDRWGSIDILVNNAALF----DLAPIVDITRESYDRLFAINVSGTLFM 115

Query: 149 IKHAARVMINRG-GGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRV 207
           ++  AR MI +G GG II+ AS AG  G      Y A+K A++ LT++A   L R+GI V
Sbjct: 116 MQAVARAMIAQGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLIRHGINV 175

Query: 208 NCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRS 267
           N I+P  V        W    DG +         P  ++ R + E V       G   R+
Sbjct: 176 NAIAPGVVDGEH----W----DGVDAKFARYENRPRGEKKRLVGEAVP-----FGRMGRA 222

Query: 268 KDIAEAALYLASDESRYVSGHNLVVDGG 295
           +D+   A++LAS ++ Y+      VDGG
Sbjct: 223 EDLTGMAIFLASTDADYIVAQTYNVDGG 250

This bacterial subgroup includes Rhodobacter sphaeroides SDH, and other SDHs. SDH preferentially interconverts D-sorbitol (D-glucitol) and D-fructose, but also interconverts L-iditol/L-sorbose and galactitol/D-tagatose. SDH is NAD-dependent and is a dimeric member of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 254

>gnl|CDD|188170 TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogenase

 Score =  139 bits (353), Expect = 5e-40
 Identities = 93/271 (34%), Positives = 135/271 (49%), Gaps = 33/271 (12%)

Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVV---IADVEDTLGSVLASTLAPAPVTFVHC 85
           LEGKVA++TG   G+G+      A  GA +V    ++  +T   V A          +  
Sbjct: 3   LEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEALG---RRFLSLTA 59

Query: 86  DVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGM 145
           D+S  E I+ L++S V  +G +DIL NNAG++   R+  +  +F   ++D+VM VN+K +
Sbjct: 60  DLSDIEAIKALVDSAVEEFGHIDILVNNAGII---RRADAE-EFSEKDWDDVMNVNLKSV 115

Query: 146 ALGIKHAARVMINRG-GGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYG 204
               + AA+  + +G GG II+ AS+    GG+   +YTASKHA+ GLTK  A E    G
Sbjct: 116 FFLTQAAAKHFLKQGRGGKIINIASMLSFQGGIRVPSYTASKHAVAGLTKLLANEWAAKG 175

Query: 205 IRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT 264
           I VN I+P  +AT        N+      DE  N  I  +                 G  
Sbjct: 176 INVNAIAPGYMAT--------NNTQALRADEDRNAAILERIP--------------AGRW 213

Query: 265 LRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
               DI   A++LAS  S YV+G+ L VDGG
Sbjct: 214 GTPDDIGGPAVFLASSASDYVNGYTLAVDGG 244

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 248

>gnl|CDD|236190 PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

 Score =  139 bits (353), Expect = 6e-40
 Identities = 78/274 (28%), Positives = 112/274 (40%), Gaps = 35/274 (12%)

Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVS 88
             GK   +TG A+GIG A    F   GAKV+  D           T    P      DVS
Sbjct: 6   FSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQA-------FLTQEDYPFATFVLDVS 58

Query: 89  LEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALG 148
               +  +    ++  G LD+L N AG+L    +  +      +++     VN  G    
Sbjct: 59  DAAAVAQVCQRLLAETGPLDVLVNAAGIL----RMGATDSLSDEDWQQTFAVNAGGAFNL 114

Query: 149 IKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVN 208
            +        +  G I++  S A  +  +G  AY ASK A+  L K    EL  YG+R N
Sbjct: 115 FRAVMPQFRRQRSGAIVTVGSNAAHVPRIGMAAYGASKAALTSLAKCVGLELAPYGVRCN 174

Query: 209 CISPFGVATSMLVNAWRNSGDGEEE-----DECMNFGIPSQKEVRKMEEFVSGLGNLKGT 263
            +SP    T M    W    DGE++      E    GIP  K                  
Sbjct: 175 VVSPGSTDTDMQRTLW-VDEDGEQQVIAGFPEQFKLGIPLGK------------------ 215

Query: 264 TLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
             R ++IA A L+LASD + +++  ++VVDGG T
Sbjct: 216 IARPQEIANAVLFLASDLASHITLQDIVVDGGAT 249

Length = 252

>gnl|CDD|187635 cd08930, SDR_c8, classical (c) SDR, subgroup 8

 Score =  139 bits (353), Expect = 6e-40
 Identities = 80/281 (28%), Positives = 123/281 (43%), Gaps = 46/281 (16%)

Query: 30  EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAP---APVTFVHCD 86
           E K+ +ITG A  IG+A  +     GA++++AD+       L   L       V  +  D
Sbjct: 1   EDKIILITGAAGLIGKAFCKALLSAGARLILADINAPALEQLKEELTNLYKNRVIALELD 60

Query: 87  VSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMA 146
           ++ +E I+ LI S + ++GR+DIL NNA     +       +F  ++++ V+ VN+ G  
Sbjct: 61  ITSKESIKELIESYLEKFGRIDILINNAYP-SPKVWGSRFEEFPYEQWNEVLNVNLGGAF 119

Query: 147 LGIKHAARVMINRGGGCIISTASVAGVMGG----------LGPHAYTASKHAIVGLTKNA 196
           L  +   ++   +G G II+ AS+ GV+              P  Y+  K  I+ LTK  
Sbjct: 120 LCSQAFIKLFKKQGKGSIINIASIYGVIAPDFRIYENTQMYSPVEYSVIKAGIIHLTKYL 179

Query: 197 ACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSG 256
           A      GIRVN ISP G+          N                         EF+  
Sbjct: 180 AKYYADTGIRVNAISPGGI--------LNNQP----------------------SEFLEK 209

Query: 257 LGNL--KGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
                     L  +D+  A ++L SD S YV+G NLV+DGG
Sbjct: 210 YTKKCPLKRMLNPEDLRGAIIFLLSDASSYVTGQNLVIDGG 250

This subgroup has a fairly well conserved active site tetrad and domain size of the classical SDRs, but has an atypical NAD-binding motif ([ST]G[GA]XGXXG). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187617 cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_coenzyme A_reductase (ChcA)_like, classical (c) SDRs

 Score =  139 bits (351), Expect = 9e-40
 Identities = 76/270 (28%), Positives = 119/270 (44%), Gaps = 33/270 (12%)

Query: 34  AIITGGARGIGEAAVRLFARHGAKVVI---ADVEDTLGSVLASTLAPAPVTFVHCDVSLE 90
           A++TGG+RGIG+A     A  GA VVI      +                  V  DVS  
Sbjct: 1   ALVTGGSRGIGKAIALRLAERGADVVINYRKSKDAAAEVAAEIEELGGKAVVVRADVSQP 60

Query: 91  EDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIK 150
           +D+E +  +   R+GRLD+L +NA         + + +     +D  M  N+K +    +
Sbjct: 61  QDVEEMFAAVKERFGRLDVLVSNA----AAGAFRPLSELTPAHWDAKMNTNLKALVHCAQ 116

Query: 151 HAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCI 210
            AA++M  RGGG I++ +S+  +       A   +K A+  L +  A ELG  GIRVN +
Sbjct: 117 QAAKLMRERGGGRIVAISSLGSIRALPNYLAVGTAKAALEALVRYLAVELGPRGIRVNAV 176

Query: 211 SPFGVATSMLVNAWRNSGDGEEE--DECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSK 268
           SP  + T  L   + N  D  E                  ++                 +
Sbjct: 177 SPGVIDTDAL-AHFPNREDLLEAAAANTP---------AGRVGT--------------PQ 212

Query: 269 DIAEAALYLASDESRYVSGHNLVVDGGVTT 298
           D+A+A  +L SD +R ++G  LVVDGG++ 
Sbjct: 213 DVADAVGFLCSDAARMITGQTLVVDGGLSI 242

This subgroup contains classical SDR proteins, including members identified as 1-cyclohexenylcarbonyl coenzyme A reductase. ChcA of Streptomyces collinus is implicated in the final reduction step of shikimic acid to ansatrienin. ChcA shows sequence similarity to the SDR family of NAD-binding proteins, but it lacks the conserved Tyr of the characteristic catalytic site. This subgroup also contains the NADH-dependent enoyl-[acyl-carrier-protein(ACP)] reductase FabL from Bacillus subtilis. This enzyme participates in bacterial fatty acid synthesis, in type II fatty-acid synthases and catalyzes the last step in each elongation cycle. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|236094 PRK07774, PRK07774, short chain dehydrogenase; Provisional

 Score =  138 bits (350), Expect = 1e-39
 Identities = 85/270 (31%), Positives = 126/270 (46%), Gaps = 29/270 (10%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHC-- 85
           R + KVAI+TG A GIG+A     AR GA VV+AD+       +A  +     T +    
Sbjct: 3   RFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQV 62

Query: 86  DVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGM 145
           DVS  +  + + ++TVS +G +D L NNA + G   K   +I    D +   M VN+ G 
Sbjct: 63  DVSDPDSAKAMADATVSAFGGIDYLVNNAAIYGGM-KLDLLITVPWDYYKKFMSVNLDGA 121

Query: 146 ALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGI 205
            +  +   + M  RGGG I++ +S A  +       Y  +K  + GLT+  A ELG   I
Sbjct: 122 LVCTRAVYKHMAKRGGGAIVNQSSTAAWLYS-NF--YGLAKVGLNGLTQQLARELGGMNI 178

Query: 206 RVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL 265
           RVN I+P  + T     A R     E   + +  GIP  +                GT  
Sbjct: 179 RVNAIAPGPIDT----EATRTVTPKEFVADMVK-GIPLSR---------------MGT-- 216

Query: 266 RSKDIAEAALYLASDESRYVSGHNLVVDGG 295
             +D+    L+L SDE+ +++G    VDGG
Sbjct: 217 -PEDLVGMCLFLLSDEASWITGQIFNVDGG 245

Length = 250

>gnl|CDD|213929 TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase

 Score =  138 bits (350), Expect = 2e-39
 Identities = 83/271 (30%), Positives = 120/271 (44%), Gaps = 30/271 (11%)

Query: 34  AIITGGARGIGEAAVRLFARHGAKVVIADV-EDTLGSVLASTLAPA-PVTFVHCDVSLEE 91
            ++TG A+GIG A  R  A  GA+V   D   + L  ++A       P      DV+   
Sbjct: 1   VLVTGAAQGIGYAVARALAEAGARVAAVDRNFEQLLELVADLRRYGYPFATYKLDVADSA 60

Query: 92  DIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKH 151
            ++ ++      YG +D+L N AG+L    +  +I     +++     VN  G+    + 
Sbjct: 61  AVDEVVQRLEREYGPIDVLVNVAGIL----RLGAIDSLSDEDWQATFAVNTFGVFNVSQA 116

Query: 152 AARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCIS 211
            +  M  R  G I++  S A  +  +G  AY ASK A+  LTK    EL  YGIR N +S
Sbjct: 117 VSPRMKRRRSGAIVTVGSNAANVPRMGMAAYAASKAALTMLTKCLGLELAPYGIRCNVVS 176

Query: 212 PFGVATSMLVNAWRNSGDGEEE-----DECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLR 266
           P    T M    W N   GE++      E    GIP  K                     
Sbjct: 177 PGSTDTEMQRQLW-NDEYGEQQVIAGSPEQFRLGIPLGK------------------IAE 217

Query: 267 SKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
             DIA A L+LASD + +++ H+LVVDGG T
Sbjct: 218 PSDIANAVLFLASDLASHITMHDLVVDGGAT 248

Members of this family are 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28), the third enzyme in the biosynthesis of 2,3-dihydroxybenzoic acid (DHB) from chorismate. The first two enzymes are isochorismate synthase (EC 5.4.4.2) and isochorismatase (EC 3.3.2.1). Synthesis is often followed by adenylation by the enzyme DHBA-AMP ligase (EC 2.7.7.58) to activate (DHB) for a non-ribosomal peptide synthetase. Length = 250

>gnl|CDD|180822 PRK07069, PRK07069, short chain dehydrogenase; Validated

 Score =  137 bits (348), Expect = 3e-39
 Identities = 89/273 (32%), Positives = 128/273 (46%), Gaps = 36/273 (13%)

Query: 34  AIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAP------APVTF--VHC 85
           A ITG A G+G A  R  A  GAKV + D+ D   + L +  A         V F  V  
Sbjct: 2   AFITGAAGGLGRAIARRMAEQGAKVFLTDIND--AAGLDAFAAEINAAHGEGVAFAAVQ- 58

Query: 86  DVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGM 145
           DV+ E   + L+       G L +L NNAGV        +I   + DE+  VM +NV+ +
Sbjct: 59  DVTDEAQWQALLAQAADAMGGLSVLVNNAGVGSF----GAIEQIELDEWRRVMAINVESI 114

Query: 146 ALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAA--CELGRY 203
            LG KHA   +       I++ +SVA         AY ASK A+  LTK+ A  C     
Sbjct: 115 FLGCKHALPYLRASQPASIVNISSVAAFKAEPDYTAYNASKAAVASLTKSIALDCARRGL 174

Query: 204 GIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGT 263
            +R N I P  + T ++   ++  G+ E   + +  G+P    + ++ E           
Sbjct: 175 DVRCNSIHPTFIRTGIVDPIFQRLGEEEATRK-LARGVP----LGRLGE----------- 218

Query: 264 TLRSKDIAEAALYLASDESRYVSGHNLVVDGGV 296
                D+A A LYLASDESR+V+G  LV+DGG+
Sbjct: 219 ---PDDVAHAVLYLASDESRFVTGAELVIDGGI 248

Length = 251

>gnl|CDD|187629 cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydrogenase type 10 (HSD10)-like, classical (c) SDRs

 Score =  137 bits (348), Expect = 3e-39
 Identities = 75/203 (36%), Positives = 107/203 (52%), Gaps = 18/203 (8%)

Query: 30  EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSL 89
           +G VA++TGGA G+G A V      GAKVVI D+ ++ G  +A         FV  DV+ 
Sbjct: 1   KGLVAVVTGGASGLGLATVERLLAQGAKVVILDLPNSPGETVAK--LGDNCRFVPVDVTS 58

Query: 90  EEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDA------DEFDNVMRVNVK 143
           E+D++  +    +++GRLDI+ N AG+     K     +         + F  V+ VN+ 
Sbjct: 59  EKDVKAALALAKAKFGRLDIVVNCAGI-AVAAK---TYNKKGQQPHSLELFQRVINVNLI 114

Query: 144 GMALGIKHAARVMI----NRGG--GCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAA 197
           G    I+ AA  M     ++GG  G II+TASVA   G +G  AY+ASK  IVG+T   A
Sbjct: 115 GTFNVIRLAAGAMGKNEPDQGGERGVIINTASVAAFEGQIGQAAYSASKGGIVGMTLPIA 174

Query: 198 CELGRYGIRVNCISPFGVATSML 220
            +L   GIRV  I+P    T +L
Sbjct: 175 RDLAPQGIRVVTIAPGLFDTPLL 197

HSD10, also known as amyloid-peptide-binding alcohol dehydrogenase (ABAD), was previously identified as a L-3-hydroxyacyl-CoA dehydrogenase, HADH2. In fatty acid metabolism, HADH2 catalyzes the third step of beta-oxidation, the conversion of a hydroxyl to a keto group in the NAD-dependent oxidation of L-3-hydroxyacyl CoA. In addition to alcohol dehydrogenase and HADH2 activites, HSD10 has steroid dehydrogenase activity. Although the mechanism is unclear, HSD10 is implicated in the formation of amyloid beta-petide in the brain (which is linked to the development of Alzheimer's disease). Although HSD10 is normally concentrated in the mitochondria, in the presence of amyloid beta-peptide it translocates into the plasma membrane, where it's action may generate cytotoxic aldehydes and may lower estrogen levels through its use of 17-beta-estradiol as a substrate. HSD10 is a member of the SRD family, but differs from other SDRs by the presence of two insertions of unknown function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 252

>gnl|CDD|236209 PRK08265, PRK08265, short chain dehydrogenase; Provisional

 Score =  137 bits (348), Expect = 4e-39
 Identities = 85/277 (30%), Positives = 129/277 (46%), Gaps = 43/277 (15%)

Query: 27  RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCD 86
             L GKVAI+TGGA  IG A  R     GA+V I D++   G+ +A++L      F+  D
Sbjct: 2   IGLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASL-GERARFIATD 60

Query: 87  VSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMA 146
           ++ +  IE  + + V+R+GR+DIL N A    +     S  D+ A      + VN+   A
Sbjct: 61  ITDDAAIERAVATVVARFGRVDILVNLACTYLDDGLASSRADWLA-----ALDVNLVSAA 115

Query: 147 LGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIR 206
           +  + AA   + RGGG I++  S++      G   Y ASK AI  LT++ A +L   GIR
Sbjct: 116 MLAQ-AAHPHLARGGGAIVNFTSISAKFAQTGRWLYPASKAAIRQLTRSMAMDLAPDGIR 174

Query: 207 VNCISPFGVATSMLVNAWRNS--------GDGEEEDECMNFGIPSQKEVRKMEEFVSGLG 258
           VN +SP           W  S        GD  + D                   V+   
Sbjct: 175 VNSVSP----------GWTWSRVMDELSGGDRAKADR------------------VAAPF 206

Query: 259 NLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
           +L G     +++A+   +L SD + +V+G +  VDGG
Sbjct: 207 HLLGRVGDPEEVAQVVAFLCSDAASFVTGADYAVDGG 243

Length = 261

>gnl|CDD|237220 PRK12828, PRK12828, short chain dehydrogenase; Provisional

 Score =  136 bits (345), Expect = 5e-39
 Identities = 77/274 (28%), Positives = 113/274 (41%), Gaps = 46/274 (16%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVI-----ADVEDTLGSVLASTLAPAPVTF 82
            L+GKV  ITGG  G+G A     A  GA+V +     A +  TL  V A       +  
Sbjct: 4   SLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPAD---ALRIGG 60

Query: 83  VHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNV 142
           +  D+   +     ++    ++GRLD L N AG          I D DAD +D +  VNV
Sbjct: 61  I--DLVDPQAARRAVDEVNRQFGRLDALVNIAGAFVWGT----IADGDADTWDRMYGVNV 114

Query: 143 KGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGR 202
           K      K A   +   GGG I++  + A +  G G  AY A+K  +  LT+  A EL  
Sbjct: 115 KTTLNASKAALPALTASGGGRIVNIGAGAALKAGPGMGAYAAAKAGVARLTEALAAELLD 174

Query: 203 YGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKG 262
            GI VN + P  + T                        P  +      +F         
Sbjct: 175 RGITVNAVLPSIIDT------------------------PPNRADMPDADF--------S 202

Query: 263 TTLRSKDIAEAALYLASDESRYVSGHNLVVDGGV 296
             +  + IA    +L SDE++ ++G ++ VDGGV
Sbjct: 203 RWVTPEQIAAVIAFLLSDEAQAITGASIPVDGGV 236

Length = 239

>gnl|CDD|187662 cd09761, A3DFK9-like_SDR_c, Clostridium thermocellum A3DFK9-like, a putative carbohydrate or polyalcohol metabolizing SDR, classical (c) SDRs

 Score =  135 bits (340), Expect = 3e-38
 Identities = 80/267 (29%), Positives = 123/267 (46%), Gaps = 30/267 (11%)

Query: 31  GKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLE 90
           GKVAI+TGG  GIG+     F   G KVV AD+++  G+  A    P  + FVH DV+ E
Sbjct: 1   GKVAIVTGGGHGIGKQICLDFLEAGDKVVFADIDEERGADFAEAEGPN-LFFVHGDVADE 59

Query: 91  EDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIK 150
             ++ ++ + + + GR+D+L NNA           +     +E+D ++ VN+ G     +
Sbjct: 60  TLVKFVVYAMLEKLGRIDVLVNNAARGSK----GILSSLLLEEWDRILSVNLTGPYELSR 115

Query: 151 HAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCI 210
           +    +I +  G II+ AS           AY ASK  +V LT   A  LG   IRVNCI
Sbjct: 116 YCRDELI-KNKGRIINIASTRAFQSEPDSEAYAASKGGLVALTHALAMSLGPD-IRVNCI 173

Query: 211 SPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSKDI 270
           SP           W N+ + +E                 + +      +  G     KDI
Sbjct: 174 SP----------GWINTTEQQE------------FTAAPLTQ-EDHAQHPAGRVGTPKDI 210

Query: 271 AEAALYLASDESRYVSGHNLVVDGGVT 297
           A   L+L   ++ +++G   +VDGG+T
Sbjct: 211 ANLVLFLCQQDAGFITGETFIVDGGMT 237

This subgroup includes a putative carbohydrate or polyalcohol metabolizing SDR (A3DFK9) from Clostridium thermocellum. Its members have a TGXXXGXG classical-SDR glycine-rich NAD-binding motif, and some have a canonical SDR active site tetrad (A3DFK9 lacks the upstream Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|180802 PRK07035, PRK07035, short chain dehydrogenase; Provisional

 Score =  135 bits (341), Expect = 4e-38
 Identities = 88/278 (31%), Positives = 130/278 (46%), Gaps = 39/278 (14%)

Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIAD--VEDTLGSVLASTLAPAPVTFVHCD 86
           L GK+A++TG +RGIGEA  +L A+ GA V+++   ++       A   A      + C 
Sbjct: 6   LTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACH 65

Query: 87  VSLEEDIENLINSTVSRYGRLDILYNNAGV---LGNQRKHKSIIDFDADEFDNVMRVNVK 143
           +   E I+ L      R+GRLDIL NNA      G+      I+D D   F   + VN++
Sbjct: 66  IGEMEQIDALFAHIRERHGRLDILVNNAAANPYFGH------ILDTDLGAFQKTVDVNIR 119

Query: 144 GMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRY 203
           G       A ++M  +GGG I++ ASV GV  G     Y+ +K A++ +TK  A E   +
Sbjct: 120 GYFFMSVEAGKLMKEQGGGSIVNVASVNGVSPGDFQGIYSITKAAVISMTKAFAKECAPF 179

Query: 204 GIRVNCISPFGVAT---SMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNL 260
           GIRVN + P    T   S L           + D  +   + +   +R+  E        
Sbjct: 180 GIRVNALLPGLTDTKFASALF----------KNDAILKQAL-AHIPLRRHAE-------- 220

Query: 261 KGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT 298
                   ++A A LYLASD S Y +G  L VDGG  +
Sbjct: 221 ------PSEMAGAVLYLASDASSYTTGECLNVDGGYLS 252

Length = 252

>gnl|CDD|180817 PRK07060, PRK07060, short chain dehydrogenase; Provisional

 Score =  134 bits (340), Expect = 4e-38
 Identities = 88/271 (32%), Positives = 121/271 (44%), Gaps = 34/271 (12%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDV 87
              GK  ++TG + GIG A     A+ GA+VV A         LA      P+     DV
Sbjct: 6   DFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRL---DV 62

Query: 88  SLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMAL 147
             +  I   +    +  G  D L N AG+       +S +D  A+ FD VM VN +G AL
Sbjct: 63  GDDAAIRAAL----AAAGAFDGLVNCAGI----ASLESALDMTAEGFDRVMAVNARGAAL 114

Query: 148 GIKHAARVMI-NRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIR 206
             +H AR MI    GG I++ +S A ++G     AY ASK A+  +T+    ELG +GIR
Sbjct: 115 VARHVARAMIAAGRGGSIVNVSSQAALVGLPDHLAYCASKAALDAITRVLCVELGPHGIR 174

Query: 207 VNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLR 266
           VN ++P    T M   AW       ++   M   IP       +  F             
Sbjct: 175 VNSVNPTVTLTPMAAEAW----SDPQKSGPMLAAIP-------LGRFAE----------- 212

Query: 267 SKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
             D+A   L+L SD +  VSG +L VDGG T
Sbjct: 213 VDDVAAPILFLLSDAASMVSGVSLPVDGGYT 243

Length = 245

>gnl|CDD|183489 PRK12384, PRK12384, sorbitol-6-phosphate dehydrogenase; Provisional

 Score =  134 bits (338), Expect = 1e-37
 Identities = 68/271 (25%), Positives = 119/271 (43%), Gaps = 21/271 (7%)

Query: 30  EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVE----DTLGSVLASTLAPAPVTFVHC 85
             +VA++ GG + +G       A  G +V +AD+       +   + +            
Sbjct: 1   MNQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGA 60

Query: 86  DVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGM 145
           D + E+ +  L       +GR+D+L  NAG+     K   I DF   +FD  ++VN+ G 
Sbjct: 61  DATSEQSVLALSRGVDEIFGRVDLLVYNAGIA----KAAFITDFQLGDFDRSLQVNLVGY 116

Query: 146 ALGIKHAARVMINRG-GGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYG 204
            L  +  +R+MI  G  G II   S +G +G      Y+A+K   VGLT++ A +L  YG
Sbjct: 117 FLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFGGVGLTQSLALDLAEYG 176

Query: 205 IRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT 264
           I V+ +    +  S +   ++              GI    EV   + ++  +   +G  
Sbjct: 177 ITVHSLMLGNLLKSPM---FQ----SLLPQYAKKLGIK-PDEVE--QYYIDKVPLKRGCD 226

Query: 265 LRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
              +D+    L+ AS ++ Y +G ++ V GG
Sbjct: 227 Y--QDVLNMLLFYASPKASYCTGQSINVTGG 255

Length = 259

>gnl|CDD|187641 cd08936, CR_SDR_c, Porcine peroxisomal carbonyl reductase like, classical (c) SDR

 Score =  133 bits (337), Expect = 1e-37
 Identities = 95/287 (33%), Positives = 139/287 (48%), Gaps = 46/287 (16%)

Query: 26  HRR--LEGKVAIITGGARGIGEAAVRLFARHGAKVVIA-----DVEDTLGSVLASTLAPA 78
            RR  L  KVA++T    GIG A  R  A+ GA VV++     +V+  + ++    L+  
Sbjct: 3   TRRDPLANKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQQNVDRAVATLQGEGLS-- 60

Query: 79  PVTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGV---LGNQRKHKSIIDFDADEFD 135
            VT   C V   ED E L+ + V+ +G +DIL +NA V    GN      I+D   + +D
Sbjct: 61  -VTGTVCHVGKAEDRERLVATAVNLHGGVDILVSNAAVNPFFGN------ILDSTEEVWD 113

Query: 136 NVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGV--MGGLGPHAYTASKHAIVGLT 193
            ++ VNVK  AL  K     M  RGGG ++  +SVA      GLGP  Y  SK A++GLT
Sbjct: 114 KILDVNVKATALMTKAVVPEMEKRGGGSVVIVSSVAAFHPFPGLGP--YNVSKTALLGLT 171

Query: 194 KNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEF 253
           KN A EL    IRVNC++P  + TS     W +    E         +     +R++ + 
Sbjct: 172 KNLAPELAPRNIRVNCLAPGLIKTSFSSALWMDKAVEES--------MKETLRIRRLGQ- 222

Query: 254 VSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTSR 300
                         +D A    +L S+++ Y++G  +VV GG T SR
Sbjct: 223 -------------PEDCAGIVSFLCSEDASYITGETVVVGGG-TPSR 255

This subgroup contains porcine peroxisomal carbonyl reductase and similar proteins. The porcine enzyme efficiently reduces retinals. This subgroup also includes human dehydrogenase/reductase (SDR family) member 4 (DHRS4), and human DHRS4L1. DHRS4 is a peroxisomal enzyme with 3beta-hydroxysteroid dehydrogenase activity; it catalyzes the reduction of 3-keto-C19/C21-steroids into 3beta-hydroxysteroids more efficiently than it does the retinal reduction. The human DHRS4 gene cluster contains DHRS4, DHRS4L2 and DHRS4L1. DHRS4L2 and DHRS4L1 are paralogs of DHRS4, DHRS4L2 being the most recent member. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|235702 PRK06124, PRK06124, gluconate 5-dehydrogenase; Provisional

 Score =  133 bits (337), Expect = 2e-37
 Identities = 82/275 (29%), Positives = 130/275 (47%), Gaps = 36/275 (13%)

Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVI-----ADVEDTLGSVLASTLAPAPVTFV 83
           L G+VA++TG ARG+G    R  A  GA V++     A +E  + ++ A+  A   + F 
Sbjct: 9   LAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAF- 67

Query: 84  HCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVN-V 142
             D++ EE +        + +GRLDIL NN G     R  + + + D      ++  + V
Sbjct: 68  --DIADEEAVAAAFARIDAEHGRLDILVNNVGA----RDRRPLAELDDAAIRALLETDLV 121

Query: 143 KGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGR 202
             + L  + AA+ M  +G G II+  S+AG +   G   Y A+K  + GL +  A E G 
Sbjct: 122 APILLS-RLAAQRMKRQGYGRIIAITSIAGQVARAGDAVYPAAKQGLTGLMRALAAEFGP 180

Query: 203 YGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKG 262
           +GI  N I+P   AT        N+    +                 +  +++    L G
Sbjct: 181 HGITSNAIAPGYFATET------NAAMAADPA---------------VGPWLAQRTPL-G 218

Query: 263 TTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
              R ++IA AA++LAS  + YV+GH L VDGG +
Sbjct: 219 RWGRPEEIAGAAVFLASPAASYVNGHVLAVDGGYS 253

Length = 256

>gnl|CDD|237219 PRK12827, PRK12827, short chain dehydrogenase; Provisional

 Score =  132 bits (334), Expect = 3e-37
 Identities = 82/274 (29%), Positives = 121/274 (44%), Gaps = 37/274 (13%)

Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAP------APVTF 82
           L+ +  +ITGG+ G+G A     A  GA V++ D+    G   A  +A            
Sbjct: 4   LDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALG 63

Query: 83  VHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNV 142
           +  DV         +++ V  +GRLDIL NNAG+        +  +   +E+D+V+ VN+
Sbjct: 64  LAFDVRDFAATRAALDAGVEEFGRLDILVNNAGIA----TDAAFAELSIEEWDDVIDVNL 119

Query: 143 KGMALGIKHAARVMIN-RGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELG 201
            G     + A   MI  R GG I++ ASVAGV G  G   Y ASK  ++GLTK  A EL 
Sbjct: 120 DGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGNRGQVNYAASKAGLIGLTKTLANELA 179

Query: 202 RYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLK 261
             GI VN ++P  + T M  NA       E     +      + +               
Sbjct: 180 PRGITVNAVAPGAINTPMADNAAPT----EHLLNPVPVQRLGEPD--------------- 220

Query: 262 GTTLRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
                  ++A    +L SD + YV+G  + VDGG
Sbjct: 221 -------EVAALVAFLVSDAASYVTGQVIPVDGG 247

Length = 249

>gnl|CDD|187584 cd05323, ADH_SDR_c_like, insect type alcohol dehydrogenase (ADH)-like, classical (c) SDRs

 Score =  131 bits (332), Expect = 6e-37
 Identities = 69/195 (35%), Positives = 96/195 (49%), Gaps = 8/195 (4%)

Query: 32  KVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSV--LASTLAPAPVTFVHCDVSL 89
           KVAIITGGA GIG A  +L  + GAKV I D  +  G+   L +       TFV CDV+ 
Sbjct: 1   KVAIITGGASGIGLATAKLLLKKGAKVAILDRNENPGAAAELQAINPKVKATFVQCDVTS 60

Query: 90  EEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGM---A 146
            E +       + ++GR+DIL NNAG+L  +    +       E    + VN+ G+    
Sbjct: 61  WEQLAAAFKKAIEKFGRVDILINNAGILDEKSYLFAGKLPPPWE--KTIDVNLTGVINTT 118

Query: 147 LGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACEL-GRYGI 205
               H         GG I++  SVAG+        Y+ASKH +VG T++ A  L  + G+
Sbjct: 119 YLALHYMDKNKGGKGGVIVNIGSVAGLYPAPQFPVYSASKHGVVGFTRSLADLLEYKTGV 178

Query: 206 RVNCISPFGVATSML 220
           RVN I P    T +L
Sbjct: 179 RVNAICPGFTNTPLL 193

This subgroup contains insect type ADH, and 15-hydroxyprostaglandin dehydrogenase (15-PGDH) type I; these proteins are classical SDRs. ADH catalyzes the NAD+-dependent oxidation of alcohols to aldehydes/ketones. This subgroup is distinct from the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase/reductase family, and evolved in fruit flies to allow the digestion of fermenting fruit. 15-PGDH catalyzes the NAD-dependent interconversion of (5Z,13E)-(15S)-11alpha,15-dihydroxy-9-oxoprost-13-enoate and (5Z,13E)-11alpha-hydroxy-9,15-dioxoprost-13-enoate, and has a typical SDR glycine-rich NAD-binding motif, which is not fully present in ADH. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score =  137 bits (346), Expect = 7e-37
 Identities = 89/284 (31%), Positives = 138/284 (48%), Gaps = 30/284 (10%)

Query: 18  AWDDAPPSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAP 77
           A   +P +      +V  ITGGARGIG A    FA  G +++I D +      LA  L  
Sbjct: 259 AQAPSPLAES---PRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGD 315

Query: 78  APVTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNV 137
             ++    D++ E  +E+      +R+GRLD+L NNAG+       K  ++  A++F  V
Sbjct: 316 EHLSV-QADITDEAAVESAFAQIQARWGRLDVLVNNAGI---AEVFKPSLEQSAEDFTRV 371

Query: 138 MRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAA 197
             VN+ G     + AAR+M    GG I++  S+A ++     +AY ASK A+  L+++ A
Sbjct: 372 YDVNLSGAFACARAAARLM--SQGGVIVNLGSIASLLALPPRNAYCASKAAVTMLSRSLA 429

Query: 198 CELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGL 257
           CE    GIRVN ++P G   +  V A + SG                   R++   +  L
Sbjct: 430 CEWAPAGIRVNTVAP-GYIETPAVLALKASG-----------RADFDSIRRRIP--LGRL 475

Query: 258 GNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTSRN 301
           G+        +++AEA  +LAS  + YV+G  L VDGG T   +
Sbjct: 476 GD-------PEEVAEAIAFLASPAASYVNGATLTVDGGWTAFGD 512

Length = 520

>gnl|CDD|187613 cd05355, SDR_c1, classical (c) SDR, subgroup 1

 Score =  132 bits (333), Expect = 9e-37
 Identities = 89/285 (31%), Positives = 124/285 (43%), Gaps = 52/285 (18%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIA-------DVEDTLGSVLASTLAPAPV 80
           +L+GK A+ITGG  GIG A    FAR GA V I        D E+T   +          
Sbjct: 23  KLKGKKALITGGDSGIGRAVAIAFAREGADVAINYLPEEEDDAEETKKLIEEEG------ 76

Query: 81  TFVHC-----DVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFD 135
               C     D+  E    +L+   V  +G+LDIL NNA     Q   +SI D   ++ +
Sbjct: 77  --RKCLLIPGDLGDESFCRDLVKEVVKEFGKLDILVNNAAY---QHPQESIEDITTEQLE 131

Query: 136 NVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHA--YTASKHAIVGLT 193
              R N+  M    K A   +  + G  II+T SV    G   PH   Y A+K AIV  T
Sbjct: 132 KTFRTNIFSMFYLTKAALPHL--KKGSSIINTTSVTAYKG--SPHLLDYAATKGAIVAFT 187

Query: 194 KNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEF 253
           +  + +L   GIRVN ++P  + T +                     IPS     K+ EF
Sbjct: 188 RGLSLQLAEKGIRVNAVAPGPIWTPL---------------------IPSSFPEEKVSEF 226

Query: 254 VSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT 298
             G     G   +  ++A A ++LAS +S YV+G  L V+GG   
Sbjct: 227 --GSQVPMGRAGQPAEVAPAYVFLASQDSSYVTGQVLHVNGGEII 269

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 270

>gnl|CDD|187592 cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydrozybenzoate dehydrogenases, classical (c) SDRs

 Score =  129 bits (325), Expect = 6e-36
 Identities = 80/269 (29%), Positives = 123/269 (45%), Gaps = 33/269 (12%)

Query: 34  AIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDI 93
            I+TG A+GIG A  R   + GA V+  D+   L           P+     DV+    +
Sbjct: 1   VIVTGAAQGIGRAVARHLLQAGATVIALDLPFVL-----LLEYGDPLRLTPLDVADAAAV 55

Query: 94  ENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAA 153
             + +  ++ +G +D L N AGVL    +  +      ++++    VNV G+   ++  A
Sbjct: 56  REVCSRLLAEHGPIDALVNCAGVL----RPGATDPLSTEDWEQTFAVNVTGVFNLLQAVA 111

Query: 154 RVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPF 213
             M +R  G I++ AS A  +  +   AY ASK A+  L+K    EL  YG+R N +SP 
Sbjct: 112 PHMKDRRTGAIVTVASNAAHVPRISMAAYGASKAALASLSKCLGLELAPYGVRCNVVSPG 171

Query: 214 GVATSMLVNAWRNSGDGEEE-----DECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSK 268
              T+M    W +  DG  +      E    GIP  K                    +  
Sbjct: 172 STDTAMQRTLW-HDEDGAAQVIAGVPEQFRLGIPLGK------------------IAQPA 212

Query: 269 DIAEAALYLASDESRYVSGHNLVVDGGVT 297
           DIA A L+LASD++ +++ H+LVVDGG T
Sbjct: 213 DIANAVLFLASDQAGHITMHDLVVDGGAT 241

2,3 dihydro-2,3 dihydrozybenzoate dehydrogenase shares the characteristics of the classical SDRs. This subgroup includes Escherichai coli EntA which catalyzes the NAD+-dependent oxidation of 2,3-dihydro-2,3-dihydroxybenzoate to 2,3-dihydroxybenzoate during biosynthesis of the siderophore Enterobactin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|187607 cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP]reductase (BKR), subgroup 2, classical (c) SDR

 Score =  129 bits (325), Expect = 7e-36
 Identities = 78/270 (28%), Positives = 125/270 (46%), Gaps = 29/270 (10%)

Query: 32  KVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEE 91
           +V ++TG +RG+G A  R FAR GA+VV+     T  +   +  A      +  DV   +
Sbjct: 1   QVVLVTGASRGLGAAIARSFAREGARVVVNYYRSTESAEAVAAEAGERAIAIQADVRDRD 60

Query: 92  DIENLINSTVSRYGRLDILYNNAGV----LGNQRKHKSIIDFDADEFDNVMRVNVKGMAL 147
            ++ +I    + +G +D + NNA +      +QRK  +    D +++   +   VKG   
Sbjct: 61  QVQAMIEEAKNHFGPVDTIVNNALIDFPFDPDQRK--TFDTIDWEDYQQQLEGAVKGALN 118

Query: 148 GIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRV 207
            ++        RG G +I+  +       +  H YT +K A++G T+N A ELG YGI V
Sbjct: 119 LLQAVLPDFKERGSGRVINIGTNLFQNPVVPYHDYTTAKAALLGFTRNMAKELGPYGITV 178

Query: 208 NCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRS 267
           N +S        L+     S               + KEV    + ++    L   T   
Sbjct: 179 NMVSG------GLLKVTDASA-------------ATPKEVF---DAIAQTTPLGKVT-TP 215

Query: 268 KDIAEAALYLASDESRYVSGHNLVVDGGVT 297
           +DIA+A L+ AS  +R V+G NLVVDGG+ 
Sbjct: 216 QDIADAVLFFASPWARAVTGQNLVVDGGLV 245

This subgroup includes Rhizobium sp. NGR234 FabG1. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|181136 PRK07825, PRK07825, short chain dehydrogenase; Provisional

 Score =  128 bits (325), Expect = 1e-35
 Identities = 71/201 (35%), Positives = 98/201 (48%), Gaps = 22/201 (10%)

Query: 27  RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVE--------DTLGSVLASTLAPA 78
             L GKV  ITGGARGIG A  R  A  GA+V I D++          LG V+   L   
Sbjct: 1   DDLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGLVVGGPL--- 57

Query: 79  PVTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVM 138
                  DV+        +++  +  G +D+L NNAGV+         +D        ++
Sbjct: 58  -------DVTDPASFAAFLDAVEADLGPIDVLVNNAGVMPVGP----FLDEPDAVTRRIL 106

Query: 139 RVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAAC 198
            VNV G+ LG K AA  M+ RG G +++ AS+AG +   G   Y ASKHA+VG T  A  
Sbjct: 107 DVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIPVPGMATYCASKHAVVGFTDAARL 166

Query: 199 ELGRYGIRVNCISPFGVATSM 219
           EL   G+ V+ + P  V T +
Sbjct: 167 ELRGTGVHVSVVLPSFVNTEL 187

Length = 273

>gnl|CDD|187647 cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase, classical (c) SDRs

 Score =  127 bits (322), Expect = 2e-35
 Identities = 84/268 (31%), Positives = 129/268 (48%), Gaps = 20/268 (7%)

Query: 31  GKVAIITGGARGIGEAAVRLFARHGAKVVIADV-EDTLGSVLASTLAPAPVTFVHCDVSL 89
           GKVA++TGGA GIG A  +  A  GA VV+AD+  +    V  +         V CDV+ 
Sbjct: 1   GKVALVTGGASGIGLAIAKRLAAEGAAVVVADIDPEIAEKVAEAAQGGPRALGVQCDVTS 60

Query: 90  EEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGI 149
           E  +++     V  +G LDI+ +NAG+  +      I +   ++++  M +N+ G  L  
Sbjct: 61  EAQVQSAFEQAVLEFGGLDIVVSNAGIATSSP----IAETSLEDWNRSMDINLTGHFLVS 116

Query: 150 KHAARVMINRG-GGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVN 208
           + A R+M ++G GG I+  AS   V  G    AY+A+K A   L +  A E G  GIRVN
Sbjct: 117 REAFRIMKSQGIGGNIVFNASKNAVAPGPNAAAYSAAKAAEAHLARCLALEGGEDGIRVN 176

Query: 209 CISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSK 268
            ++P  V        +R S   E       +     K    +EE      NL    +  +
Sbjct: 177 TVNPDAV--------FRGSKIWEGV-----WRAARAKAYGLLEEEYRT-RNLLKREVLPE 222

Query: 269 DIAEAALYLASDESRYVSGHNLVVDGGV 296
           D+AEA + +AS++    +G  + VDGG 
Sbjct: 223 DVAEAVVAMASEDFGKTTGAIVTVDGGN 250

This family has bifunctional proteins with an N-terminal aldolase and a C-terminal classical SDR domain. One member is identified as a rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. The SDR domain has a canonical SDR glycine-rich NAD(P) binding motif and a match to the characteristic active site triad. However, it lacks an upstream active site Asn typical of SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187611 cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-hydroxyacyl-CoA dehydrogenase-like, classical(c)-like SDRs

 Score =  127 bits (322), Expect = 2e-35
 Identities = 66/200 (33%), Positives = 104/200 (52%), Gaps = 13/200 (6%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTL-GSVLASTLAPAPVTFVH-- 84
           R +G+V ++TG   G+G A    FA  GAKVV+ D+     GS  +S+ A   V  +   
Sbjct: 2   RFDGRVVLVTGAGGGLGRAYALAFAERGAKVVVNDLGGDRKGSGKSSSAADKVVDEIKAA 61

Query: 85  -----CDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMR 139
                 +    ED E ++ + +  +GR+DIL NNAG+L    + +S      +++D VMR
Sbjct: 62  GGKAVANYDSVEDGEKIVKTAIDAFGRVDILVNNAGIL----RDRSFAKMSEEDWDLVMR 117

Query: 140 VNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACE 199
           V++KG     + A   M  +  G II+T+S AG+ G  G   Y+A+K  ++GL+   A E
Sbjct: 118 VHLKGSFKVTRAAWPYMRKQKFGRIINTSSAAGLYGNFGQANYSAAKLGLLGLSNTLAIE 177

Query: 200 LGRYGIRVNCISPFGVATSM 219
             +Y I  N I+P    + M
Sbjct: 178 GAKYNITCNTIAP-AAGSRM 196

Beta oxidation of fatty acids in eukaryotes occurs by a four-reaction cycle, that may take place in mitochondria or in peroxisomes. (3R)-hydroxyacyl-CoA dehydrogenase is part of rat peroxisomal multifunctional MFE-2, it is a member of the NAD-dependent SDRs, but contains an additional small C-terminal domain that completes the active site pocket and participates in dimerization. The atypical, additional C-terminal extension allows for more extensive dimerization contact than other SDRs. MFE-2 catalyzes the second and third reactions of the peroxisomal beta oxidation cycle. Proteins in this subgroup have a typical catalytic triad, but have a His in place of the usual upstream Asn. This subgroup also contains members identified as 17-beta-hydroxysteroid dehydrogenases, including human peroxisomal 17-beta-hydroxysteroid dehydrogenase type 4 (17beta-HSD type 4, aka MFE-2, encoded by HSD17B4 gene) which is involved in fatty acid beta-oxidation and steroid metabolism. This subgroup also includes two SDR domains of the Neurospora crassa and Saccharomyces cerevisiae multifunctional beta-oxidation protein (MFP, aka Fox2). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 250

>gnl|CDD|235816 PRK06500, PRK06500, short chain dehydrogenase; Provisional

 Score =  127 bits (322), Expect = 2e-35
 Identities = 84/271 (30%), Positives = 122/271 (45%), Gaps = 27/271 (9%)

Query: 27  RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADV-EDTLGSVLASTLAPAPVTFVHC 85
            RL+GK A+ITGG  GIG    R F   GA+V I      +L +  A     A V  +  
Sbjct: 2   SRLQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALV--IRA 59

Query: 86  DVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGM 145
           D       + L  +    +GRLD ++ NAGV     K   + D+D   FD     NVKG 
Sbjct: 60  DAGDVAAQKALAQALAEAFGRLDAVFINAGVA----KFAPLEDWDEAMFDRSFNTNVKGP 115

Query: 146 ALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGI 205
              I+ A   ++      +++  S+   +G      Y ASK A++ L K  + EL   GI
Sbjct: 116 YFLIQ-ALLPLLANPASIVLNG-SINAHIGMPNSSVYAASKAALLSLAKTLSGELLPRGI 173

Query: 206 RVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL 265
           RVN +SP  V T      +   G  E   + +   I +   + +            GT  
Sbjct: 174 RVNAVSPGPVQTP----LYGKLGLPEATLDAVAAQIQALVPLGRF-----------GTPE 218

Query: 266 RSKDIAEAALYLASDESRYVSGHNLVVDGGV 296
              +IA+A LYLASDES ++ G  ++VDGG+
Sbjct: 219 ---EIAKAVLYLASDESAFIVGSEIIVDGGM 246

Length = 249

>gnl|CDD|235739 PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

 Score =  127 bits (322), Expect = 3e-35
 Identities = 84/274 (30%), Positives = 125/274 (45%), Gaps = 24/274 (8%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDV 87
            L G+VA+ITGG  GIG A V  F   GA+V + +      + L        V  V  DV
Sbjct: 3   WLHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRF-GDHVLVVEGDV 61

Query: 88  SLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADE----FDNVMRVNVK 143
           +   D +  ++ TV  +G+LD    NAG+        S++D  A+     FD +  VNVK
Sbjct: 62  TSYADNQRAVDQTVDAFGKLDCFVGNAGIWDYNT---SLVDIPAETLDTAFDEIFNVNVK 118

Query: 144 GMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRY 203
           G  LG K A   +    GG +I T S +    G G   YTASKHA+VGL +  A EL   
Sbjct: 119 GYLLGAKAALPALK-ASGGSMIFTLSNSSFYPGGGGPLYTASKHAVVGLVRQLAYELAPK 177

Query: 204 GIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGT 263
            IRVN ++P G  T +     R      + +  +        +   + + ++ +  L   
Sbjct: 178 -IRVNGVAPGGTVTDL-----RGPASLGQGETSI-------SDSPGLADMIAAITPL-QF 223

Query: 264 TLRSKDIAEAALYLASDE-SRYVSGHNLVVDGGV 296
             + +D     + LAS   SR ++G  +  DGG+
Sbjct: 224 APQPEDHTGPYVLLASRRNSRALTGVVINADGGL 257

Length = 263

>gnl|CDD|235933 PRK07097, PRK07097, gluconate 5-dehydrogenase; Provisional

 Score =  127 bits (321), Expect = 4e-35
 Identities = 82/273 (30%), Positives = 137/273 (50%), Gaps = 28/273 (10%)

Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADV-EDTLGSVLAS--TLAPAPVTFVHC 85
           L+GK+A+ITG + GIG A  + +A+ GA +V  D+ ++ +   LA+   L      +V C
Sbjct: 8   LKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYV-C 66

Query: 86  DVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGM 145
           DV+ E+ ++ +++      G +DIL NNAG++    K   +++  A++F  V+ +++   
Sbjct: 67  DVTDEDGVQAMVSQIEKEVGVIDILVNNAGII----KRIPMLEMSAEDFRQVIDIDLNAP 122

Query: 146 ALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGI 205
            +  K     MI +G G II+  S+   +G     AY A+K  +  LTKN A E G   I
Sbjct: 123 FIVSKAVIPSMIKKGHGKIINICSMMSELGRETVSAYAAAKGGLKMLTKNIASEYGEANI 182

Query: 206 RVNCISPFGVATSM--LVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGT 263
           + N I P  +AT     +   +  G     D+ +    P+ +                G 
Sbjct: 183 QCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIAKTPAARW---------------GD 227

Query: 264 TLRSKDIAEAALYLASDESRYVSGHNLVVDGGV 296
               +D+A  A++LASD S +V+GH L VDGG+
Sbjct: 228 P---EDLAGPAVFLASDASNFVNGHILYVDGGI 257

Length = 265

>gnl|CDD|181585 PRK08936, PRK08936, glucose-1-dehydrogenase; Provisional

 Score =  126 bits (318), Expect = 9e-35
 Identities = 87/275 (31%), Positives = 133/275 (48%), Gaps = 34/275 (12%)

Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVI---ADVEDTLGSVLASTLAPAPVTFVHC 85
           LEGKV +ITGG+ G+G A    F +  AKVVI   +D E+          A      V  
Sbjct: 5   LEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKG 64

Query: 86  DVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGM 145
           DV++E D+ NLI + V  +G LD++ NNAG+      H    +   ++++ V+  N+ G 
Sbjct: 65  DVTVESDVVNLIQTAVKEFGTLDVMINNAGIENAVPSH----EMSLEDWNKVINTNLTGA 120

Query: 146 ALGIKHAARVMI-NRGGGCIISTASVAGVMGGLGPH--AYTASKHAIVGLTKNAACELGR 202
            LG + A +  + +   G II+ +SV   +    P    Y ASK  +  +T+  A E   
Sbjct: 121 FLGSREAIKYFVEHDIKGNIINMSSVHEQIP--WPLFVHYAASKGGVKLMTETLAMEYAP 178

Query: 203 YGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKG 262
            GIRVN I P  + T   +NA +             F  P Q+    +E  +  +G +  
Sbjct: 179 KGIRVNNIGPGAINTP--INAEK-------------FADPKQRA--DVESMIP-MGYIG- 219

Query: 263 TTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
              + ++IA  A +LAS E+ YV+G  L  DGG+T
Sbjct: 220 ---KPEEIAAVAAWLASSEASYVTGITLFADGGMT 251

Length = 261

>gnl|CDD|235853 PRK06701, PRK06701, short chain dehydrogenase; Provisional

 Score =  126 bits (319), Expect = 2e-34
 Identities = 88/281 (31%), Positives = 129/281 (45%), Gaps = 47/281 (16%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIA------DVEDTLGSVLASTLAPAPVT 81
           +L+GKVA+ITGG  GIG A   LFA+ GA + I       D  +T   V           
Sbjct: 43  KLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEG------- 95

Query: 82  FVHC-----DVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDN 136
            V C     DVS E   ++ +  TV   GRLDIL NNA     Q   +S+ D  A++ D 
Sbjct: 96  -VKCLLIPGDVSDEAFCKDAVEETVRELGRLDILVNNAAF---QYPQQSLEDITAEQLDK 151

Query: 137 VMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNA 196
             + N+       K A   +  + G  II+T S+ G  G      Y+A+K AI   T++ 
Sbjct: 152 TFKTNIYSYFHMTKAALPHL--KQGSAIINTGSITGYEGNETLIDYSATKGAIHAFTRSL 209

Query: 197 ACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSG 256
           A  L + GIRVN ++P  + T +                     IPS  +  K+ +F  G
Sbjct: 210 AQSLVQKGIRVNAVAPGPIWTPL---------------------IPSDFDEEKVSQF--G 246

Query: 257 LGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
                    + +++A A ++LAS +S Y++G  L V+GGV 
Sbjct: 247 SNTPMQRPGQPEELAPAYVFLASPDSSYITGQMLHVNGGVI 287

Length = 290

>gnl|CDD|236110 PRK07831, PRK07831, short chain dehydrogenase; Provisional

 Score =  125 bits (316), Expect = 2e-34
 Identities = 78/196 (39%), Positives = 107/196 (54%), Gaps = 10/196 (5%)

Query: 23  PPSHRRLEGKVAIITGGA-RGIGEAAVRLFARHGAKVVIADV-EDTLGSV---LASTLAP 77
            P H  L GKV ++T  A  GIG A  R     GA+VVI+D+ E  LG     LA+ L  
Sbjct: 9   VPGHGLLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGL 68

Query: 78  APVTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNV 137
             V  V CDV+ E  ++ LI++ V R GRLD+L NNAG LG Q     ++D   DE+  V
Sbjct: 69  GRVEAVVCDVTSEAQVDALIDAAVERLGRLDVLVNNAG-LGGQ---TPVVDMTDDEWSRV 124

Query: 138 MRVNVKGMALGIKHAARVMINRG-GGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNA 196
           + V + G     + A R M  RG GG I++ ASV G     G   Y A+K  ++ LT+ +
Sbjct: 125 LDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRAQHGQAHYAAAKAGVMALTRCS 184

Query: 197 ACELGRYGIRVNCISP 212
           A E   YG+R+N ++P
Sbjct: 185 ALEAAEYGVRINAVAP 200

Length = 262

>gnl|CDD|187606 cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB)-like, classical (c) SDRs

 Score =  125 bits (315), Expect = 3e-34
 Identities = 89/274 (32%), Positives = 128/274 (46%), Gaps = 25/274 (9%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDV 87
            L+G+VA+ITGG  G+G A V  F   GAKV + D      + L +    A V  V  DV
Sbjct: 1   WLKGEVALITGGGSGLGRALVERFVAEGAKVAVLDRSAEKVAELRADFGDAVVG-VEGDV 59

Query: 88  SLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADE----FDNVMRVNVK 143
               D E  +   V R+G+LD    NAG+        S++D   ++    FD +  +NVK
Sbjct: 60  RSLADNERAVARCVERFGKLDCFIGNAGIWDYS---TSLVDIPEEKLDEAFDELFHINVK 116

Query: 144 GMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRY 203
           G  LG K A   +     G +I T S AG   G G   YTASKHA+VGL K  A EL  +
Sbjct: 117 GYILGAKAALPALY-ATEGSVIFTVSNAGFYPGGGGPLYTASKHAVVGLVKQLAYELAPH 175

Query: 204 GIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGT 263
            IRVN ++P G+ T +       +  G+ E       +          + +  +  L G 
Sbjct: 176 -IRVNGVAPGGMVTDLR----GPASLGQGETSISTPPLD---------DMLKSILPL-GF 220

Query: 264 TLRSKDIAEAALYLAS-DESRYVSGHNLVVDGGV 296
               +D   A ++LAS  ++R  +G  +  DGG+
Sbjct: 221 APEPEDYTGAYVFLASRGDNRPATGTVINYDGGM 254

cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB) is a classical SDR, it is of particular importance for its role in the degradation of biphenyl/polychlorinated biphenyls(PCBs); PCBs are a significant source of environmental contamination. This subgroup also includes Pseudomonas putida F1 cis-biphenyl-1,2-dihydrodiol-1,2-dehydrogenase (aka cis-benzene glycol dehydrogenase, encoded by the bnzE gene), which participates in benzene metabolism. In addition it includes Pseudomonas sp. C18 putative 1,2-dihydroxy-1,2-dihydronaphthalene dehydrogenase (aka dibenzothiophene dihydrodiol dehydrogenase, encoded by the doxE gene) which participates in an upper naphthalene catabolic pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|187598 cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hydroxysteroid dehydrogenase XI-like, classical (c) SDRs

 Score =  123 bits (312), Expect = 6e-34
 Identities = 61/192 (31%), Positives = 89/192 (46%), Gaps = 9/192 (4%)

Query: 33  VAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVH--CDVSLE 90
           + +ITGG  GIG      FA+ GAKVVI D+ +      A+ +  A     +  CDVS  
Sbjct: 1   IVLITGGGSGIGRLLALEFAKRGAKVVILDINEKGAEETANNVRKAGGKVHYYKCDVSKR 60

Query: 91  EDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIK 150
           E++           G + IL NNAGV+      K +++   +E +    VN        K
Sbjct: 61  EEVYEAAKKIKKEVGDVTILINNAGVVSG----KKLLELPDEEIEKTFEVNTLAHFWTTK 116

Query: 151 HAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRY---GIRV 207
                M+ R  G I++ ASVAG++   G   Y ASK A VG  ++   EL  Y   GI+ 
Sbjct: 117 AFLPDMLERNHGHIVTIASVAGLISPAGLADYCASKAAAVGFHESLRLELKAYGKPGIKT 176

Query: 208 NCISPFGVATSM 219
             + P+ + T M
Sbjct: 177 TLVCPYFINTGM 188

17-beta-hydroxysteroid dehydrogenases (17betaHSD) are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. 17betaHSD type XI, a classical SDR, preferentially converts 3alpha-adiol to androsterone but not numerous other tested steroids. This subgroup of classical SDRs also includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|236099 PRK07791, PRK07791, short chain dehydrogenase; Provisional

 Score =  124 bits (314), Expect = 6e-34
 Identities = 68/201 (33%), Positives = 105/201 (52%), Gaps = 21/201 (10%)

Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADV----------EDTLGSVLASTLAPA 78
           L+G+V I+TG   GIG A    FA  GA+VV+ D+               +V+   +A  
Sbjct: 4   LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAG 63

Query: 79  PVTFVHC-DVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNV 137
                +  D++  +   NL+++ V  +G LD+L NNAG+L    + + I +   +E+D V
Sbjct: 64  GEAVANGDDIADWDGAANLVDAAVETFGGLDVLVNNAGIL----RDRMIANMSEEEWDAV 119

Query: 138 MRVNVKGMALGIKHAARVMINRG------GGCIISTASVAGVMGGLGPHAYTASKHAIVG 191
           + V++KG    ++HAA                II+T+S AG+ G +G   Y+A+K  I  
Sbjct: 120 IAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQGSVGQGNYSAAKAGIAA 179

Query: 192 LTKNAACELGRYGIRVNCISP 212
           LT  AA ELGRYG+ VN I+P
Sbjct: 180 LTLVAAAELGRYGVTVNAIAP 200

Length = 286

>gnl|CDD|135765 PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydrogenase; Validated

 Score =  123 bits (310), Expect = 1e-33
 Identities = 87/278 (31%), Positives = 127/278 (45%), Gaps = 38/278 (13%)

Query: 24  PSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVE-DTLGSVLASTLAPAPVTF 82
             + RL+GK AIITG   GIG+     FA  GA VV++D+  D    V+          F
Sbjct: 4   SDNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAF 63

Query: 83  -VHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVN 141
              CD++ E+++  L +  +S+ G++DIL NNAG  G +       D    +F     +N
Sbjct: 64  ACRCDITSEQELSALADFALSKLGKVDILVNNAGGGGPKP-----FDMPMADFRRAYELN 118

Query: 142 VKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELG 201
           V       +  A  M   GGG I++  S+A     +   +Y +SK A   L +N A +LG
Sbjct: 119 VFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLG 178

Query: 202 RYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLK 261
              IRVN I+P  + T  L +                  I  + E +KM         L+
Sbjct: 179 EKNIRVNGIAPGAILTDALKSV-----------------ITPEIE-QKM---------LQ 211

Query: 262 GTTLR----SKDIAEAALYLASDESRYVSGHNLVVDGG 295
            T +R     +DIA AAL+L S  + +VSG  L V GG
Sbjct: 212 HTPIRRLGQPQDIANAALFLCSPAASWVSGQILTVSGG 249

Length = 255

>gnl|CDD|184025 PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenase; Provisional

 Score =  123 bits (309), Expect = 2e-33
 Identities = 75/271 (27%), Positives = 128/271 (47%), Gaps = 21/271 (7%)

Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVH--CD 86
           L GK A++TG A GIG+      AR GA V IAD+     + +A  +  A    +    D
Sbjct: 5   LNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMD 64

Query: 87  VSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKS-IIDFDADEFDNVMRVNVKGM 145
           V+ E+ +   I+    R+G +DIL +NAG+     +  + I ++   ++  +  ++V G 
Sbjct: 65  VTNEDAVNAGIDKVAERFGSVDILVSNAGI-----QIVNPIENYSFADWKKMQAIHVDGA 119

Query: 146 ALGIKHAARVMI-NRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYG 204
            L  K A + M  +  GG +I   SV          AY  +KH ++GL +  A E  ++ 
Sbjct: 120 FLTTKAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAKHGLLGLARVLAKEGAKHN 179

Query: 205 IRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT 264
           +R + + P  V T ++        D +  ++    GI S++EV K    V     + G  
Sbjct: 180 VRSHVVCPGFVRTPLV--------DKQIPEQAKELGI-SEEEVVKK---VMLGKTVDGVF 227

Query: 265 LRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
              +D+A+  L+L+S  S  ++G + VV  G
Sbjct: 228 TTVEDVAQTVLFLSSFPSAALTGQSFVVSHG 258

Length = 262

>gnl|CDD|235990 PRK07326, PRK07326, short chain dehydrogenase; Provisional

 Score =  122 bits (308), Expect = 2e-33
 Identities = 69/190 (36%), Positives = 100/190 (52%), Gaps = 6/190 (3%)

Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVI-ADVEDTLGSVLASTLAPAPVTFVHCDV 87
           L+GKVA+ITGG++GIG A        G KV I A  +  L    A       V  +  DV
Sbjct: 4   LKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADV 63

Query: 88  SLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMAL 147
             E D++  +++ V+ +G LD+L  NAGV         + +   +E+  V+  N+ G   
Sbjct: 64  RDEADVQRAVDAIVAAFGGLDVLIANAGV----GHFAPVEELTPEEWRLVIDTNLTGAFY 119

Query: 148 GIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRV 207
            IK A   +  RGGG II+ +S+AG     G  AY ASK  +VG ++ A  +L +YGI+V
Sbjct: 120 TIKAAVPAL-KRGGGYIINISSLAGTNFFAGGAAYNASKFGLVGFSEAAMLDLRQYGIKV 178

Query: 208 NCISPFGVAT 217
           + I P  VAT
Sbjct: 179 STIMPGSVAT 188

Length = 237

>gnl|CDD|187602 cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR

 Score =  122 bits (308), Expect = 3e-33
 Identities = 70/274 (25%), Positives = 118/274 (43%), Gaps = 29/274 (10%)

Query: 31  GKVAIITGGARGIGEAAVRLFARHGAKVVIA--DVEDTLGSVLASTLAPAPVTFVHCDVS 88
           GKVA++T  + GIG A  R  AR GA+V I   + E+   +        A V  V  D++
Sbjct: 1   GKVALVTAASSGIGLAIARALAREGARVAICARNRENLERAASELRAGGAGVLAVVADLT 60

Query: 89  LEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALG 148
             EDI+ L+      +GR+DIL NNAG            +   +++     + +  +   
Sbjct: 61  DPEDIDRLVEKAGDAFGRVDILVNNAG----GPPPGPFAELTDEDWLEAFDLKLLSVIRI 116

Query: 149 IKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVN 208
           ++     M  RG G I++ +S+              ++  ++GL K  + EL   G+ VN
Sbjct: 117 VRAVLPGMKERGWGRIVNISSLTVKEPEPNLVLSNVARAGLIGLVKTLSRELAPDGVTVN 176

Query: 209 CISPFGVATSMLV-----NAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGT 263
            + P  + T  +       A +     EE ++ +   IP    V K EE           
Sbjct: 177 SVLPGYIDTERVRRLLEARAEKEGISVEEAEKEVASQIPL-GRVGKPEEL---------- 225

Query: 264 TLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
                  A    +LAS+++ Y++G  ++VDGG+T
Sbjct: 226 -------AALIAFLASEKASYITGQAILVDGGLT 252

This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|180462 PRK06198, PRK06198, short chain dehydrogenase; Provisional

 Score =  122 bits (308), Expect = 3e-33
 Identities = 83/271 (30%), Positives = 122/271 (45%), Gaps = 35/271 (12%)

Query: 26  HRRLEGKVAIITGGARGIGEAAVRLFARHGAK-VVIADVEDTLGSVLASTLA--PAPVTF 82
             RL+GKVA++TGG +G+G A  R FA  GA  +VI       G   A+ L    A   F
Sbjct: 1   MGRLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVF 60

Query: 83  VHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNV 142
           V  D+S  ED   ++ +    +GRLD L N AG+        +I+D   + FD    VNV
Sbjct: 61  VQADLSDVEDCRRVVAAADEAFGRLDALVNAAGL----TDRGTILDTSPELFDRHFAVNV 116

Query: 143 KGMALGIKHAARVMINRGG-GCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELG 201
           +     ++ A ++M  R   G I++  S++   G     AY ASK A+  LT+NAA  L 
Sbjct: 117 RAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQPFLAAYCASKGALATLTRNAAYALL 176

Query: 202 RYGIRVNCISPFGVAT---SMLVNAWRNSGDG--EEEDECMNFGIPSQKEVRKMEEFVSG 256
           R  IRVN ++   +AT     +   +  + D   E+      F                 
Sbjct: 177 RNRIRVNGLNIGWMATEGEDRIQREFHGAPDDWLEKAAATQPF----------------- 219

Query: 257 LGNLKGTTLRSKDIAEAALYLASDESRYVSG 287
                G  L   ++A A  +L SDES  ++G
Sbjct: 220 -----GRLLDPDEVARAVAFLLSDESGLMTG 245

Length = 260

>gnl|CDD|180408 PRK06114, PRK06114, short chain dehydrogenase; Provisional

 Score =  122 bits (307), Expect = 3e-33
 Identities = 79/275 (28%), Positives = 128/275 (46%), Gaps = 36/275 (13%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL-----APAPVTF 82
            L+G+VA +TG   GIG+      A+ GA V + D+    G  LA T      A      
Sbjct: 5   DLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDG--LAETAEHIEAAGRRAIQ 62

Query: 83  VHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNV 142
           +  DV+ + D+   +  T +  G L +  N AG+           + + +++  VM +N+
Sbjct: 63  IAADVTSKADLRAAVARTEAELGALTLAVNAAGIANAN----PAEEMEEEQWQTVMDINL 118

Query: 143 KGMALGIKHAARVMINRGGGCIISTASVAGVM--GGLGPHAYTASKHAIVGLTKNAACEL 200
            G+ L  +  AR M+  GGG I++ AS++G++   GL    Y ASK  ++ L+K+ A E 
Sbjct: 119 TGVFLSCQAEARAMLENGGGSIVNIASMSGIIVNRGLLQAHYNASKAGVIHLSKSLAMEW 178

Query: 201 GRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNL 260
              GIRVN ISP   AT M         +   + +      P Q+ + K++E V      
Sbjct: 179 VGRGIRVNSISPGYTATPM-----NTRPEMVHQTKLFEEQTPMQR-MAKVDEMVG----- 227

Query: 261 KGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
                        A++L SD + + +G +L+VDGG
Sbjct: 228 ------------PAVFLLSDAASFCTGVDLLVDGG 250

Length = 254

>gnl|CDD|235726 PRK06181, PRK06181, short chain dehydrogenase; Provisional

 Score =  122 bits (307), Expect = 4e-33
 Identities = 79/205 (38%), Positives = 103/205 (50%), Gaps = 12/205 (5%)

Query: 31  GKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLA--PAPVTFVHCDVS 88
           GKV IITG + GIG A     AR GA++V+A   +T  + LA  LA        V  DVS
Sbjct: 1   GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVS 60

Query: 89  LEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIID--FDADEFDNVMRVNVKGMA 146
             E  E LI + V+R+G +DIL NNAG+        S  D   D   F+ VMRVN  G A
Sbjct: 61  DAEACERLIEAAVARFGGIDILVNNAGI-----TMWSRFDELTDLSVFERVMRVNYLG-A 114

Query: 147 LGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIR 206
           +   HAA   +    G I+  +S+AG+ G      Y ASKHA+ G   +   EL   G+ 
Sbjct: 115 VYCTHAALPHLKASRGQIVVVSSLAGLTGVPTRSGYAASKHALHGFFDSLRIELADDGVA 174

Query: 207 VNCISPFGVATSMLVNAWRNSGDGE 231
           V  + P  VAT +   A    GDG+
Sbjct: 175 VTVVCPGFVATDIRKRAL--DGDGK 197

Length = 263

>gnl|CDD|187623 cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroid dehydrogenase (7 alpha-HSDH), classical (c) SDRs

 Score =  121 bits (305), Expect = 5e-33
 Identities = 86/265 (32%), Positives = 128/265 (48%), Gaps = 28/265 (10%)

Query: 33  VAIITGGARGIGEAAVRLFARHGAKVVIADV--EDTLGSVLASTLAPAPVTFVHCDVSLE 90
           VAI+TGGA GIG+A     A+ GA VVIAD+  E       A   A      + C+V+ E
Sbjct: 1   VAIVTGGAAGIGKAIAGTLAKAGASVVIADLKSEGAEAVAAAIQQAGGQAIGLECNVTSE 60

Query: 91  EDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIK 150
           +D+E ++ +TVS++G + IL NNAG  G +     + + D   F+   ++N+       +
Sbjct: 61  QDLEAVVKATVSQFGGITILVNNAGGGGPKPFDMPMTEED---FEWAFKLNLFSAFRLSQ 117

Query: 151 HAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCI 210
             A  M   GGG I++ +S++     +   AY +SK A+  +T+N A +LG  GIRVN +
Sbjct: 118 LCAPHMQKAGGGAILNISSMSSENKNVRIAAYGSSKAAVNHMTRNLAFDLGPKGIRVNAV 177

Query: 211 SPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSKDI 270
           +P  V T  L +                   P  +        +  LG         +DI
Sbjct: 178 APGAVKTDALASV----------------LTPEIERAMLKHTPLGRLG-------EPEDI 214

Query: 271 AEAALYLASDESRYVSGHNLVVDGG 295
           A AAL+L S  S +VSG  L V GG
Sbjct: 215 ANAALFLCSPASAWVSGQVLTVSGG 239

This bacterial subgroup contains 7 alpha-HSDHs, including Escherichia coli 7 alpha-HSDH. 7 alpha-HSDH, a member of the SDR family, catalyzes the NAD+ -dependent dehydrogenation of a hydroxyl group at position 7 of the steroid skeleton of bile acids. In humans the two primary bile acids are cholic and chenodeoxycholic acids, these are formed from cholesterol in the liver. Escherichia coli 7 alpha-HSDH dehydroxylates these bile acids in the human intestine. Mammalian 7 alpha-HSDH activity has been found in livers. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|236116 PRK07856, PRK07856, short chain dehydrogenase; Provisional

 Score =  120 bits (304), Expect = 1e-32
 Identities = 89/275 (32%), Positives = 123/275 (44%), Gaps = 48/275 (17%)

Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVS 88
           L G+V ++TGG RGIG    R F   GA VV        G     T+   P  F   DV 
Sbjct: 4   LTGRVVLVTGGTRGIGAGIARAFLAAGATVV------VCGRRAPETVDGRPAEFHAADVR 57

Query: 89  LEEDIENLINSTVSRYGRLDILYNNAG----VLGNQ---RKHKSIIDFDADEFDNVMRVN 141
             + +  L+++ V R+GRLD+L NNAG     L  +   R H+ I+            +N
Sbjct: 58  DPDQVAALVDAIVERHGRLDVLVNNAGGSPYALAAEASPRFHEKIV-----------ELN 106

Query: 142 VKGMALGIKHAARVMINR-GGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACEL 200
           +    L  + A  VM  + GGG I++  SV+G     G  AY A+K  ++ LT++ A E 
Sbjct: 107 LLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPSPGTAAYGAAKAGLLNLTRSLAVEW 166

Query: 201 GRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNL 260
               +RVN +    V T     +  + GD  E    +   +P              LG L
Sbjct: 167 AP-KVRVNAVVVGLVRTE---QSELHYGD-AEGIAAVAATVP--------------LGRL 207

Query: 261 KGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
                   DIA A L+LASD + YVSG NL V GG
Sbjct: 208 A----TPADIAWACLFLASDLASYVSGANLEVHGG 238

Length = 252

>gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score =  120 bits (304), Expect = 1e-32
 Identities = 56/195 (28%), Positives = 90/195 (46%), Gaps = 17/195 (8%)

Query: 32  KVAIITGGARGIGEAAVRLFARHGAKVV-----IADVEDTLGSVLASTLAPAPVTFVHCD 86
           KV +ITG + GIG A     A  G +V+        +E          L    +  +  D
Sbjct: 1   KVVLITGCSSGIGLALALALAAQGYRVIATARNPDKLES------LGELLNDNLEVLELD 54

Query: 87  VSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKG-M 145
           V+ EE I+  +   + R+GR+D+L NNAG          + +   +E   +  VNV G +
Sbjct: 55  VTDEESIKAAVKEVIERFGRIDVLVNNAGYGLF----GPLEETSIEEVRELFEVNVFGPL 110

Query: 146 ALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGI 205
            +  +    +M  +G G I++ +SVAG++       Y ASK A+  L+++   EL  +GI
Sbjct: 111 RV-TRAFLPLMRKQGSGRIVNVSSVAGLVPTPFLGPYCASKAALEALSESLRLELAPFGI 169

Query: 206 RVNCISPFGVATSML 220
           +V  I P  V T   
Sbjct: 170 KVTIIEPGPVRTGFA 184

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|181508 PRK08628, PRK08628, short chain dehydrogenase; Provisional

 Score =  120 bits (302), Expect = 2e-32
 Identities = 80/274 (29%), Positives = 121/274 (44%), Gaps = 30/274 (10%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAP-VTFVHCD 86
            L+ KV I+TGGA GIG A     A  GA  VI               A  P   FV  D
Sbjct: 4   NLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAEELRALQPRAEFVQVD 63

Query: 87  VSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNV---K 143
           ++ +    + +  TV+++GR+D L NNAGV  N       ++   + F   +  N+    
Sbjct: 64  LTDDAQCRDAVEQTVAKFGRIDGLVNNAGV--NDGVG---LEAGREAFVASLERNLIHYY 118

Query: 144 GMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRY 203
            MA    H     +    G I++ +S   + G  G   Y A+K A + LT+  A  L + 
Sbjct: 119 VMA----HYCLPHLKASRGAIVNISSKTALTGQGGTSGYAAAKGAQLALTREWAVALAKD 174

Query: 204 GIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGT 263
           G+RVN + P  V T +  N      D E +   +   IP              LG+ + T
Sbjct: 175 GVRVNAVIPAEVMTPLYENWIATFDDPEAKLAAITAKIP--------------LGH-RMT 219

Query: 264 TLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
           T  +++IA+ A++L S+ S + +G  L VDGG  
Sbjct: 220 T--AEEIADTAVFLLSERSSHTTGQWLFVDGGYV 251

Length = 258

>gnl|CDD|237187 PRK12743, PRK12743, oxidoreductase; Provisional

 Score =  118 bits (299), Expect = 6e-32
 Identities = 86/273 (31%), Positives = 124/273 (45%), Gaps = 38/273 (13%)

Query: 32  KVAIITGGARGIGEAAVRLFARHGAKVVI------ADVEDTLGSVLASTLAPAPVTFVHC 85
           +VAI+T    GIG+A   L A+ G  + I         ++T   V +             
Sbjct: 3   QVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRS---HGVRAEIRQL 59

Query: 86  DVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGM 145
           D+S   +    ++  + R GR+D+L NNAG +         +D D DE+  +  V+V G 
Sbjct: 60  DLSDLPEGAQALDKLIQRLGRIDVLVNNAGAMTKA----PFLDMDFDEWRKIFTVDVDGA 115

Query: 146 ALGIKHAARVMINRG-GGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYG 204
            L  + AAR M+ +G GG II+  SV       G  AYTA+KHA+ GLTK  A EL  +G
Sbjct: 116 FLCSQIAARHMVKQGQGGRIINITSVHEHTPLPGASAYTAAKHALGGLTKAMALELVEHG 175

Query: 205 IRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT 264
           I VN ++P  +AT M      N  D  +       GIP              LG    T 
Sbjct: 176 ILVNAVAPGAIATPM------NGMDDSDVKPDSRPGIP--------------LGRPGDT- 214

Query: 265 LRSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
               +IA    +L S+ + Y +G +L+VDGG  
Sbjct: 215 ---HEIASLVAWLCSEGASYTTGQSLIVDGGFM 244

Length = 256

>gnl|CDD|181518 PRK08643, PRK08643, acetoin reductase; Validated

 Score =  118 bits (298), Expect = 7e-32
 Identities = 85/271 (31%), Positives = 125/271 (46%), Gaps = 24/271 (8%)

Query: 30  EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAP--VTFVHCDV 87
             KVA++TG  +GIG A  +     G KV I D  +      A  L+        V  DV
Sbjct: 1   MSKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADV 60

Query: 88  SLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMAL 147
           S  + +   +   V  +G L+++ NNAGV         I     ++FD V  +NV G+  
Sbjct: 61  SDRDQVFAAVRQVVDTFGDLNVVVNNAGV----APTTPIETITEEQFDKVYNINVGGVIW 116

Query: 148 GIKHAARVMINRG-GGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIR 206
           GI+ A       G GG II+  S AGV+G      Y+++K A+ GLT+ AA +L   GI 
Sbjct: 117 GIQAAQEAFKKLGHGGKIINATSQAGVVGNPELAVYSSTKFAVRGLTQTAARDLASEGIT 176

Query: 207 VNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVS--GLGNLKGTT 264
           VN  +P  V T M+ +       GE   +   +G         ME+F     LG L    
Sbjct: 177 VNAYAPGIVKTPMMFDIAHQV--GENAGKPDEWG---------MEQFAKDITLGRLS--- 222

Query: 265 LRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
              +D+A    +LA  +S Y++G  ++VDGG
Sbjct: 223 -EPEDVANCVSFLAGPDSDYITGQTIIVDGG 252

Length = 256

>gnl|CDD|171821 PRK12937, PRK12937, short chain dehydrogenase; Provisional

 Score =  118 bits (297), Expect = 8e-32
 Identities = 88/275 (32%), Positives = 133/275 (48%), Gaps = 42/275 (15%)

Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVI------ADVEDTLGSVLASTLAPAPVTF 82
           L  KVAI+TG +RGIG A  R  A  G  V +      A  ++ +  + A   A      
Sbjct: 3   LSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEA---AGGRAIA 59

Query: 83  VHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNV 142
           V  DV+    +  L ++  + +GR+D+L NNAGV+       +I DFD ++FD  +  N+
Sbjct: 60  VQADVADAAAVTRLFDAAETAFGRIDVLVNNAGVMP----LGTIADFDLEDFDRTIATNL 115

Query: 143 KGMALGIKHAARVMINRGGGCII--STASVAGVMGGLGPHAYTASKHAIVGLTKNAACEL 200
           +G  + ++ AAR +    GG II  ST+ +A  + G GP  Y ASK A+ GL    A EL
Sbjct: 116 RGAFVVLREAARHL--GQGGRIINLSTSVIALPLPGYGP--YAASKAAVEGLVHVLANEL 171

Query: 201 GRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNL 260
              GI VN ++P  VAT +  N     G   E+ + +    P ++           LG  
Sbjct: 172 RGRGITVNAVAPGPVATELFFN-----GKSAEQIDQLAGLAPLER-----------LG-- 213

Query: 261 KGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
                  ++IA A  +LA  +  +V+G  L V+GG
Sbjct: 214 -----TPEEIAAAVAFLAGPDGAWVNGQVLRVNGG 243

Length = 245

>gnl|CDD|236074 PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  118 bits (297), Expect = 8e-32
 Identities = 72/212 (33%), Positives = 110/212 (51%), Gaps = 18/212 (8%)

Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKV-VIADVEDTLGSVLASTLAP--APVTFVHC 85
           L+GK A+ITG  RGIG A     A+ G  V ++A  E+ L +V A  +      V     
Sbjct: 5   LQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAV-AEEVEAYGVKVVIATA 63

Query: 86  DVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGM 145
           DVS  E++   I    +  G +DIL NNAG+     K    ++ D  E++ +++VN+   
Sbjct: 64  DVSDYEEVTAAIEQLKNELGSIDILINNAGI----SKFGKFLELDPAEWEKIIQVNL--- 116

Query: 146 ALGIKHAARV----MINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELG 201
            +G+ +A R     MI R  G II+ +S AG  G     AY+ASK  ++GLT++   E+ 
Sbjct: 117 -MGVYYATRAVLPSMIERQSGDIINISSTAGQKGAAVTSAYSASKFGVLGLTESLMQEVR 175

Query: 202 RYGIRVNCISPFGVATSMLVNAWRNSGDGEEE 233
           ++ IRV  ++P  VAT M V+      DG  +
Sbjct: 176 KHNIRVTALTPSTVATDMAVDL--GLTDGNPD 205

Length = 239

>gnl|CDD|236399 PRK09186, PRK09186, flagellin modification protein A; Provisional

 Score =  118 bits (298), Expect = 9e-32
 Identities = 72/286 (25%), Positives = 122/286 (42%), Gaps = 53/286 (18%)

Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVE----DTLGSVLASTLAPAPVTFVH 84
           L+GK  +ITG    IG A V+     G  V+ AD++    + L   L        ++ V 
Sbjct: 2   LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVE 61

Query: 85  CDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKH--KSIIDFDADEFDNVMRVNV 142
            D++ +E +E  ++ +  +YG++D   N A     + K   K   D   D+F+  + +++
Sbjct: 62  LDITDQESLEEFLSKSAEKYGKIDGAVNCAY---PRNKDYGKKFFDVSLDDFNENLSLHL 118

Query: 143 KGMALGIKHAARVMINRGGGCIISTASVAGVMGG----------LGPHAYTASKHAIVGL 192
               L  +  A+    +GGG +++ +S+ GV+              P  Y A K  I+ L
Sbjct: 119 GSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKFEIYEGTSMTSPVEYAAIKAGIIHL 178

Query: 193 TKNAACELGRYGIRVNCISPFGVATSMLV---NAWRNSGDGEEEDECMNFGIPSQKEVRK 249
           TK  A       IRVNC+SP G+  +      NA++          C   G+        
Sbjct: 179 TKYLAKYFKDSNIRVNCVSPGGILDNQPEAFLNAYKK--------CCNGKGM-------- 222

Query: 250 MEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
                          L   DI    ++L SD+S+Y++G N++VD G
Sbjct: 223 ---------------LDPDDICGTLVFLLSDQSKYITGQNIIVDDG 253

Length = 256

>gnl|CDD|181297 PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  117 bits (295), Expect = 2e-31
 Identities = 85/277 (30%), Positives = 133/277 (48%), Gaps = 35/277 (12%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADV-EDTLG-SVLASTLAPAPVTFVHC 85
            L+ KV +ITGGA+G+G A     A+ GAK+ + D+ ++ L  +V         V     
Sbjct: 2   DLKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAA 61

Query: 86  DVSLEEDIENLINSTVSRYGRLDILYNNAGVLGN-----QRKHKSIIDFDADEFDNVMRV 140
           +V+ EED+E         +G+L+ L NNAG+L +      +  K       ++F +V+ V
Sbjct: 62  NVTDEEDVEATFAQIAEDFGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDV 121

Query: 141 NVKGMALGIKHAARVMINRG-GGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACE 199
           N+ G+ L  + AA  MI  G  G II+ +S+A   G +G   Y+ASK  +  +T   A E
Sbjct: 122 NLTGVFLCGREAAAKMIESGSKGVIINISSIARA-GNMGQTNYSASKAGVAAMTVTWAKE 180

Query: 200 LGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGN 259
           L RYGIRV  I+P  + T M       +    E  E +   IP    V ++ E       
Sbjct: 181 LARYGIRVAAIAPGVIETEMT------AAMKPEALERLEKMIP----VGRLGE------- 223

Query: 260 LKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGV 296
                   ++IA    ++   E+ YV+G  L +DGG+
Sbjct: 224 -------PEEIAHTVRFII--ENDYVTGRVLEIDGGL 251

Length = 253

>gnl|CDD|181721 PRK09242, PRK09242, tropinone reductase; Provisional

 Score =  117 bits (294), Expect = 3e-31
 Identities = 75/277 (27%), Positives = 122/277 (44%), Gaps = 40/277 (14%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVI----ADVEDTLGSVLASTLAPAPVTFV 83
           RL+G+ A+ITG ++GIG A  R F   GA V+I    AD        LA       V  +
Sbjct: 6   RLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGL 65

Query: 84  HCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVK 143
             DVS +ED   +++     +  L IL NNAG  GN R  K+ ID+  DE+  +   N+ 
Sbjct: 66  AADVSDDEDRRAILDWVEDHWDGLHILVNNAG--GNIR--KAAIDYTEDEWRGIFETNLF 121

Query: 144 GMALGIKHAARVMI-NRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGR 202
             A  +   A  ++       I++  SV+G+        Y  +K A++ +T+N A E   
Sbjct: 122 S-AFELSRYAHPLLKQHASSAIVNIGSVSGLTHVRSGAPYGMTKAALLQMTRNLAVEWAE 180

Query: 203 YGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKG 262
            GIRVN ++P+ + T                        P         ++   +  ++ 
Sbjct: 181 DGIRVNAVAPWYIRT------------------------PLTSGPLSDPDYYEQV--IER 214

Query: 263 TTLR----SKDIAEAALYLASDESRYVSGHNLVVDGG 295
           T +R     +++A A  +L    + Y++G  + VDGG
Sbjct: 215 TPMRRVGEPEEVAAAVAFLCMPAASYITGQCIAVDGG 251

Length = 257

>gnl|CDD|236040 PRK07523, PRK07523, gluconate 5-dehydrogenase; Provisional

 Score =  117 bits (294), Expect = 3e-31
 Identities = 86/278 (30%), Positives = 134/278 (48%), Gaps = 38/278 (13%)

Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHC--- 85
           L G+ A++TG ++GIG A     A+ GA+V++ +  D      A+          H    
Sbjct: 8   LTGRRALVTGSSQGIGYALAEGLAQAGAEVIL-NGRDPAKLAAAAESLKGQGLSAHALAF 66

Query: 86  DVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSII-DFDADEFDNVMRVNVKG 144
           DV+  + +   I++  +  G +DIL NNAG+     + ++ + DF AD F+ ++R N+  
Sbjct: 67  DVTDHDAVRAAIDAFEAEIGPIDILVNNAGM-----QFRTPLEDFPADAFERLLRTNISS 121

Query: 145 MALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYG 204
           +    +  AR MI RG G II+ ASV   +   G   YTA+K A+  LTK  A +  ++G
Sbjct: 122 VFYVGQAVARHMIARGAGKIINIASVQSALARPGIAPYTATKGAVGNLTKGMATDWAKHG 181

Query: 205 IRVNCISPFGVATSM---LVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLK 261
           ++ N I+P    T +   LV     S   E+      +G        K+EE V       
Sbjct: 182 LQCNAIAPGYFDTPLNAALVADPEFSAWLEKRTPAGRWG--------KVEELVG------ 227

Query: 262 GTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTS 299
                      A ++LASD S +V+GH L VDGG+T S
Sbjct: 228 -----------ACVFLASDASSFVNGHVLYVDGGITAS 254

Length = 255

>gnl|CDD|171531 PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score =  116 bits (292), Expect = 4e-31
 Identities = 87/271 (32%), Positives = 141/271 (52%), Gaps = 33/271 (12%)

Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVV---IADVEDTLGSVLASTLAPAPVTFVHC 85
           L GKVAIITG   G+G+      A+ GA +V   +A+  +T   V A         F+  
Sbjct: 6   LNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALG---RKFHFITA 62

Query: 86  DVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGM 145
           D+  ++DI+++++  V   G +DIL NNAG++    + + +++F   ++D+V+ +N K +
Sbjct: 63  DLIQQKDIDSIVSQAVEVMGHIDILINNAGII----RRQDLLEFGNKDWDDVININQKTV 118

Query: 146 ALGIKHAARVMINRG-GGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYG 204
               +  A+  + +G GG II+ AS+    GG+   +YTASK A++GLT+  A EL +Y 
Sbjct: 119 FFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIRVPSYTASKSAVMGLTRALATELSQYN 178

Query: 205 IRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT 264
           I VN I+P  +AT    N      D    +E +   IP+ +          G        
Sbjct: 179 INVNAIAPGYMATD---NTAALRAD-TARNEAILERIPASR---------WGT------- 218

Query: 265 LRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
               D+A  A++L+S  S YV+G+ L VDGG
Sbjct: 219 --PDDLAGPAIFLSSSASDYVTGYTLAVDGG 247

Length = 251

>gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase

 Score =  114 bits (287), Expect = 4e-31
 Identities = 45/174 (25%), Positives = 76/174 (43%), Gaps = 13/174 (7%)

Query: 32  KVAIITGGARGIGEAAVRLFARHGAKVVI----ADVEDTLGSVLASTLAP-APVTFVHCD 86
              +ITGG  G+G A  R  A  GA+ ++             ++A   A  A VT   CD
Sbjct: 1   GTVLITGGTGGLGLALARWLAAEGARHLVLVSRRGPAPGAAELVAELEALGAEVTVAACD 60

Query: 87  VSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMA 146
           V+  + +  L+ +  +  G LD + +NAGVL +      + +   + F+ V+   V G  
Sbjct: 61  VADRDALAALLAALPAALGPLDGVVHNAGVLDD----GPLEELTPERFERVLAPKVTGAW 116

Query: 147 LGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACEL 200
               +   +  +   G  +  +SVAGV+G  G   Y A+  A+  L ++   E 
Sbjct: 117 ----NLHELTRDLDLGAFVLFSSVAGVLGSPGQANYAAANAALDALAEHRRAEG 166

This family contains a wide variety of dehydrogenases. Length = 167

>gnl|CDD|131680 TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

 Score =  121 bits (305), Expect = 7e-31
 Identities = 88/286 (30%), Positives = 127/286 (44%), Gaps = 29/286 (10%)

Query: 24  PSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTF- 82
           P  + L  +VA +TGGA GIG    R  A  GA VV+AD+         +  A     F 
Sbjct: 407 PKEKTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLN---LEAAEAVAAEINGQFG 463

Query: 83  ------VHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDN 136
                 +  DV+ E+ ++         YG +DI+ NNAG+  +        +    E+  
Sbjct: 464 AGRAVALKMDVTDEQAVKAAFADVALAYGGVDIVVNNAGIATS----SPFEETTLQEWQL 519

Query: 137 VMRVNVKGMALGIKHAARVMINRG-GGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKN 195
            + +   G  L  + A R M  +G GG I+  AS   V  G    AY+A+K A   L + 
Sbjct: 520 NLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAGKNASAYSAAKAAEAHLARC 579

Query: 196 AACELGRYGIRVNCISPFGV--ATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEF 253
            A E G YGIRVN ++P  V   + +    WR       E+    +GIP      ++EE 
Sbjct: 580 LAAEGGTYGIRVNTVNPDAVLQGSGIWDGEWR-------EERAAAYGIP----ADELEEH 628

Query: 254 VSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTS 299
            +    LK       DIAEA  +LAS +S   +G  + VDGGV  +
Sbjct: 629 YAKRTLLKRHIF-PADIAEAVFFLASSKSEKTTGCIITVDGGVPAA 673

Length = 676

>gnl|CDD|187590 cd05329, TR_SDR_c, tropinone reductase-I and II (TR-1, and TR-II)-like, classical (c) SDRs

 Score =  115 bits (290), Expect = 8e-31
 Identities = 74/276 (26%), Positives = 129/276 (46%), Gaps = 35/276 (12%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIA-----DVEDTLGSVLASTLAPAPVTF 82
            LEGK A++TGG +GIG A V   A  GA+V        ++++ L            V  
Sbjct: 3   NLEGKTALVTGGTKGIGYAIVEELAGLGAEVYTCARNQKELDECLTEWREKGFK---VEG 59

Query: 83  VHCDVSLEEDIENLINSTVSRY-GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVN 141
             CDVS   + + L+++  S + G+L+IL NNAG        K   D+  +++  +M  N
Sbjct: 60  SVCDVSSRSERQELMDTVASHFGGKLNILVNNAGTN----IRKEAKDYTEEDYSLIMSTN 115

Query: 142 VKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELG 201
            +      + A  ++   G G I+  +SVAGV+       Y A+K A+  LT++ ACE  
Sbjct: 116 FEAAYHLSRLAHPLLKASGNGNIVFISSVAGVIAVPSGAPYGATKGALNQLTRSLACEWA 175

Query: 202 RYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLK 261
           +  IRVN ++P+ +AT ++    +     E  D+     +  +  +++  E         
Sbjct: 176 KDNIRVNAVAPWVIATPLVEPVIQQK---ENLDK-----VIERTPLKRFGE--------- 218

Query: 262 GTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
                 +++A    +L    + Y++G  + VDGG+T
Sbjct: 219 -----PEEVAALVAFLCMPAASYITGQIIAVDGGLT 249

This subgroup includes TR-I and TR-II; these proteins are members of the SDR family. TRs catalyze the NADPH-dependent reductions of the 3-carbonyl group of tropinone, to a beta-hydroxyl group. TR-I and TR-II produce different stereoisomers from tropinone, TR-I produces tropine (3alpha-hydroxytropane), and TR-II, produces pseudotropine (sigma-tropine, 3beta-hydroxytropane). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 251

>gnl|CDD|181131 PRK07814, PRK07814, short chain dehydrogenase; Provisional

 Score =  116 bits (291), Expect = 9e-31
 Identities = 82/276 (29%), Positives = 122/276 (44%), Gaps = 36/276 (13%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIA-----DVEDTLGSVLASTLAPAPVTF 82
           RL+ +VA++TG  RG+G A    FA  GA V+IA      +++    + A+      V  
Sbjct: 7   RLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVA- 65

Query: 83  VHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNV 142
              D++  E    L    V  +GRLDI+ NN G          ++     +  +    NV
Sbjct: 66  --ADLAHPEATAGLAGQAVEAFGRLDIVVNNVGGTMP----NPLLSTSTKDLADAFTFNV 119

Query: 143 KGMALGIKHAARVMINR-GGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELG 201
                    A  +M+   GGG +I+ +S  G + G G  AY  +K A+   T+ AA +L 
Sbjct: 120 ATAHALTVAAVPLMLEHSGGGSVINISSTMGRLAGRGFAAYGTAKAALAHYTRLAALDLC 179

Query: 202 RYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLK 261
              IRVN I+P  + TS L                    + +  E+R   E  + L  L 
Sbjct: 180 PR-IRVNAIAPGSILTSALE------------------VVAANDELRAPMEKATPLRRLG 220

Query: 262 GTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
                 +DIA AA+YLAS    Y++G  L VDGG+T
Sbjct: 221 ----DPEDIAAAAVYLASPAGSYLTGKTLEVDGGLT 252

Length = 263

>gnl|CDD|236216 PRK08277, PRK08277, D-mannonate oxidoreductase; Provisional

 Score =  114 bits (289), Expect = 3e-30
 Identities = 89/298 (29%), Positives = 130/298 (43%), Gaps = 55/298 (18%)

Query: 24  PSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPA--PVT 81
           P+   L+GKVA+ITGG   +G A  +  AR GAKV I D        + + +  A     
Sbjct: 3   PNLFSLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEAL 62

Query: 82  FVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRK-------------HKSIID 128
            V  DV  +E +E      +  +G  DIL N AG  GN  K              K+  D
Sbjct: 63  AVKADVLDKESLEQARQQILEDFGPCDILINGAG--GNHPKATTDNEFHELIEPTKTFFD 120

Query: 129 FDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGP----HAYTA 184
            D + F+ V  +N+ G  L  +  A+ M+ R GG II+ +S    M    P     AY+A
Sbjct: 121 LDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISS----MNAFTPLTKVPAYSA 176

Query: 185 SKHAIVGLTKNAACELGRYGIRVNCISP-FGVAT---SMLVNAWRNSGDGEEEDECMNFG 240
           +K AI   T+  A    + GIRVN I+P F +     ++L N      DG   +      
Sbjct: 177 AKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNE-----DGSLTER----- 226

Query: 241 IPSQKEVRK--MEEFVSGLGNLKGTTLRSKDIAEAALYLASDE-SRYVSGHNLVVDGG 295
             + K +    M  F        G     +++    L+LA ++ S +V+G  L VDGG
Sbjct: 227 --ANKILAHTPMGRF--------GK---PEELLGTLLWLADEKASSFVTGVVLPVDGG 271

Length = 278

>gnl|CDD|236145 PRK08063, PRK08063, enoyl-(acyl carrier protein) reductase; Provisional

 Score =  113 bits (285), Expect = 5e-30
 Identities = 78/282 (27%), Positives = 120/282 (42%), Gaps = 47/282 (16%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVI--ADVEDTLGSVLASTLA-PAPVTFVH 84
              GKVA++TG +RGIG+A     A  G  + +  A              A       V 
Sbjct: 1   VFSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVK 60

Query: 85  CDVSLEEDIENLINSTVSRYGRLDILYNNA--GVLGNQRKHKSIIDFDADEFDNVMRVNV 142
            +V   E I+ +       +GRLD+  NNA  GVL      +  ++ +   +D  M +N 
Sbjct: 61  ANVGDVEKIKEMFAQIDEEFGRLDVFVNNAASGVL------RPAMELEESHWDWTMNINA 114

Query: 143 KGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYT-------ASKHAIVGLTKN 195
           K +    + AA++M   GGG IIS +S       LG   Y         SK A+  LT+ 
Sbjct: 115 KALLFCAQEAAKLMEKVGGGKIISLSS-------LGSIRYLENYTTVGVSKAALEALTRY 167

Query: 196 AACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVS 255
            A EL   GI VN +S   V T  L +                   P+++E+  +E+  +
Sbjct: 168 LAVELAPKGIAVNAVSGGAVDTDALKH------------------FPNREEL--LEDARA 207

Query: 256 GLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
                 G  +  +D+A A L+L S E+  + G  ++VDGG +
Sbjct: 208 K--TPAGRMVEPEDVANAVLFLCSPEADMIRGQTIIVDGGRS 247

Length = 250

>gnl|CDD|180823 PRK07074, PRK07074, short chain dehydrogenase; Provisional

 Score =  113 bits (285), Expect = 6e-30
 Identities = 77/271 (28%), Positives = 123/271 (45%), Gaps = 36/271 (13%)

Query: 32  KVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEE 91
           + A++TG A GIG+A  R F   G +V+  D++    +  A  L  A    V CD++   
Sbjct: 3   RTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAA 62

Query: 92  DIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKH 151
            +   + +  +  G +D+L  NAG      +  S+ D     +     +N++   L ++ 
Sbjct: 63  SLAAALANAAAERGPVDVLVANAGA----ARAASLHDTTPASWRADNALNLEAAYLCVEA 118

Query: 152 AARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCIS 211
               M+ R  G +++  SV G M  LG  AY+A+K  ++  TK  A E GR+GIR N ++
Sbjct: 119 VLEGMLKRSRGAVVNIGSVNG-MAALGHPAYSAAKAGLIHYTKLLAVEYGRFGIRANAVA 177

Query: 212 PFGVATSMLVNAW-----RNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLR 266
           P  V T     AW      N    EE            K+   +++F             
Sbjct: 178 PGTVKTQ----AWEARVAANPQVFEE-----------LKKWYPLQDFA-----------T 211

Query: 267 SKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
             D+A A L+LAS  +R ++G  L VDGG+T
Sbjct: 212 PDDVANAVLFLASPAARAITGVCLPVDGGLT 242

Length = 257

>gnl|CDD|187593 cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxysteroid dehydrogenase type 1 (11beta-HSD1)-like, classical (c) SDRs

 Score =  113 bits (285), Expect = 8e-30
 Identities = 80/259 (30%), Positives = 118/259 (45%), Gaps = 23/259 (8%)

Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVI-ADVEDTLGSVLAS--TLAPAPVTFVHC 85
           L+GKV IITG + GIGE      AR GA++V+ A  E+ L  V +    L       V  
Sbjct: 1   LQGKVVIITGASSGIGEELAYHLARLGARLVLSARREERLEEVKSECLELGAPSPHVVPL 60

Query: 86  DVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGM 145
           D+S  ED E ++   +  +G LDIL NNAG+  + R      D   D    +M VN  G 
Sbjct: 61  DMSDLEDAEQVVEEALKLFGGLDILINNAGI--SMRSL--FHDTSIDVDRKIMEVNYFGP 116

Query: 146 ALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGI 205
               K A   +I R  G I+  +S+AG +G     AY ASKHA+ G   +   EL    I
Sbjct: 117 VALTKAALPHLIERSQGSIVVVSSIAGKIGVPFRTAYAASKHALQGFFDSLRAELSEPNI 176

Query: 206 RVNCISPFGVATSMLVNAWRNSGDGEEE-DECMNFGIPSQKEVRKMEEFVSGLGNLKGTT 264
            V  + P  + T++ +NA    G    + D+    G+  ++   ++         LK   
Sbjct: 177 SVTVVCPGLIDTNIAMNALSGDGSMSAKMDDTTANGMSPEECALEI---------LKAIA 227

Query: 265 LRSKDI------AEAALYL 277
           LR +++         A+YL
Sbjct: 228 LRKREVFYARQVPLLAVYL 246

Human 11beta_HSD1 catalyzes the NADP(H)-dependent interconversion of cortisone and cortisol. This subgroup also includes human dehydrogenase/reductase SDR family member 7C (DHRS7C) and DHRS7B. These proteins have the GxxxGxG nucleotide binding motif and S-Y-K catalytic triad characteristic of the SDRs, but have an atypical C-terminal domain that contributes to homodimerization contacts. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|181225 PRK08085, PRK08085, gluconate 5-dehydrogenase; Provisional

 Score =  113 bits (284), Expect = 8e-30
 Identities = 84/276 (30%), Positives = 128/276 (46%), Gaps = 42/276 (15%)

Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADV-----EDTLGSVLASTLAPAPVTFV 83
           L GK  +ITG A+GIG       A +GA+++I D+     E  +  +    +      F 
Sbjct: 7   LAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPF- 65

Query: 84  HCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVK 143
             +V+ ++++E  I       G +D+L NNAG+   QR+H    +F   E+++V+ VN  
Sbjct: 66  --NVTHKQEVEAAIEHIEKDIGPIDVLINNAGI---QRRH-PFTEFPEQEWNDVIAVNQT 119

Query: 144 GMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRY 203
            + L  +  AR M+ R  G II+  S+   +G      Y ASK A+  LT+    EL R+
Sbjct: 120 AVFLVSQAVARYMVKRQAGKIINICSMQSELGRDTITPYAASKGAVKMLTRGMCVELARH 179

Query: 204 GIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGT 263
            I+VN I+P    T M                         K + + E F + L   K T
Sbjct: 180 NIQVNGIAPGYFKTEM------------------------TKALVEDEAFTAWL--CKRT 213

Query: 264 -TLRSKDIAE---AALYLASDESRYVSGHNLVVDGG 295
              R  D  E   AA++L+S  S +V+GH L VDGG
Sbjct: 214 PAARWGDPQELIGAAVFLSSKASDFVNGHLLFVDGG 249

Length = 254

>gnl|CDD|181605 PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrogenase; Validated

 Score =  113 bits (283), Expect = 9e-30
 Identities = 78/268 (29%), Positives = 135/268 (50%), Gaps = 27/268 (10%)

Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVS 88
           LEGKVA++TG   G+G+      A  G  +V  ++ +   ++   T        +  D+ 
Sbjct: 8   LEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVTALGRRFLSLTADLR 67

Query: 89  LEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALG 148
             + I  L+   V+ +G +DIL NNAG++    + +  I+F   ++D+VM +N+K +   
Sbjct: 68  KIDGIPALLERAVAEFGHIDILVNNAGLI----RREDAIEFSEKDWDDVMNLNIKSVFFM 123

Query: 149 IKHAARVMINRG-GGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRV 207
            + AA+  I +G GG II+ AS+    GG+   +YTASK  ++G+T+  A E  ++ I V
Sbjct: 124 SQAAAKHFIAQGNGGKIINIASMLSFQGGIRVPSYTASKSGVMGVTRLMANEWAKHNINV 183

Query: 208 NCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRS 267
           N I+P  +AT+   N  +   D +   E ++  IP+ +                G     
Sbjct: 184 NAIAPGYMATN---NTQQLRADEQRSAEILD-RIPAGRW---------------GL---P 221

Query: 268 KDIAEAALYLASDESRYVSGHNLVVDGG 295
            D+    ++LAS  S Y++G+ + VDGG
Sbjct: 222 SDLMGPVVFLASSASDYINGYTIAVDGG 249

Length = 253

>gnl|CDD|132250 TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

 Score =  112 bits (281), Expect = 2e-29
 Identities = 79/272 (29%), Positives = 127/272 (46%), Gaps = 26/272 (9%)

Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTF--VHCD 86
           L+ K AI+TGG  GIG A  R FA  GAKV + D+       +A+ +           CD
Sbjct: 1   LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACD 60

Query: 87  VSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMA 146
           ++  + ++  + +     G +D+L NNAG      K       +   ++ ++ +N+ G A
Sbjct: 61  ITDRDSVDTAVAAAEQALGPVDVLVNNAG----WDKFGPFTKTEPPLWERLIAINLTG-A 115

Query: 147 LGIKHA-ARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGI 205
           L + HA    M+ RG G I++ AS A  +G  G   Y A K  +V  +K  A E  R+GI
Sbjct: 116 LHMHHAVLPGMVERGAGRIVNIASDAARVGSSGEAVYAACKGGLVAFSKTMAREHARHGI 175

Query: 206 RVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL 265
            VN + P    T++L +    + + E+  E     IP              LG L     
Sbjct: 176 TVNVVCPGPTDTALLDDICGGAENPEKLREAFTRAIP--------------LGRLG---- 217

Query: 266 RSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
           +  D+  A L+ +SD++ +++G  L V GG+T
Sbjct: 218 QPDDLPGAILFFSSDDASFITGQVLSVSGGLT 249

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. Length = 250

>gnl|CDD|180458 PRK06194, PRK06194, hypothetical protein; Provisional

 Score =  112 bits (283), Expect = 3e-29
 Identities = 69/212 (32%), Positives = 106/212 (50%), Gaps = 21/212 (9%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADV-EDTLGSVLAS-TLAPAPVTFVHC 85
              GKVA+ITG A G G A  R+ A  G K+V+ADV +D L   +A      A V  V  
Sbjct: 3   DFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRT 62

Query: 86  DVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGM 145
           DVS    +E L ++ + R+G + +L+NNAGV         + +    +++ V+ VN+ G+
Sbjct: 63  DVSDAAQVEALADAALERFGAVHLLFNNAGVGAGGL----VWENSLADWEWVLGVNLWGV 118

Query: 146 ALGIKHAARVMINRGG------GCIISTASVAGVMGGLGPHA---YTASKHAIVGLTKNA 196
             G++    +M+          G I++TAS+A   G L P A   Y  SKHA+V LT+  
Sbjct: 119 IHGVRAFTPLMLAAAEKDPAYEGHIVNTASMA---GLLAPPAMGIYNVSKHAVVSLTETL 175

Query: 197 ACELGRYGIRVNC--ISPFGVATSMLVNAWRN 226
             +L     +V    + P+ V T  +  + RN
Sbjct: 176 YQDLSLVTDQVGASVLCPYFVPTG-IWQSERN 206

Length = 287

>gnl|CDD|235693 PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  110 bits (277), Expect = 9e-29
 Identities = 85/273 (31%), Positives = 120/273 (43%), Gaps = 38/273 (13%)

Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVI------ADVEDTLGSVLASTLAPAPVTF 82
           L+ KV ++TG  RGIG A     A+ G+ VV+       ++ +TL  V            
Sbjct: 4   LKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKE---NGGEGIG 60

Query: 83  VHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNV 142
           V  DVS  E  E L  +T+ RYG  DIL NNAG LG        ++ D    D  +  + 
Sbjct: 61  VLADVSTREGCETLAKATIDRYGVADILVNNAG-LG---LFSPFLNVDDKLIDKHISTDF 116

Query: 143 KGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGR 202
           K +    +  A+ M  R GG I++ ASVAG+    G   Y A K A++ LTK  A EL  
Sbjct: 117 KSVIYCSQELAKEM--REGGAIVNIASVAGIRPAYGLSIYGAMKAAVINLTKYLALELAP 174

Query: 203 YGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKG 262
             IRVN I+P  V T +          GE   + +             +EF      L G
Sbjct: 175 K-IRVNAIAPGFVKTKL----------GESLFKVLGM---------SEKEFAEKF-TLMG 213

Query: 263 TTLRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
             L  +++AE    +   ES  ++G   V+D G
Sbjct: 214 KILDPEEVAEFVAAILKIES--ITGQVFVLDSG 244

Length = 252

>gnl|CDD|183832 PRK12935, PRK12935, acetoacetyl-CoA reductase; Provisional

 Score =  109 bits (274), Expect = 2e-28
 Identities = 82/272 (30%), Positives = 132/272 (48%), Gaps = 32/272 (11%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVI---ADVEDTLGSVLASTLAPAPVTFVH 84
           +L GKVAI+TGGA+GIG+A     A+ GAKVVI   +  E     V         V  V 
Sbjct: 3   QLNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQ 62

Query: 85  CDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKG 144
            DVS  ED   L+   V+ +G++DIL NNAG+     + ++    + ++++ V+ VN+  
Sbjct: 63  ADVSKVEDANRLVEEAVNHFGKVDILVNNAGI----TRDRTFKKLNREDWERVIDVNLSS 118

Query: 145 MALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYG 204
           +          +     G IIS +S+ G  GG G   Y+A+K  ++G TK+ A EL +  
Sbjct: 119 VFNTTSAVLPYITEAEEGRIISISSIIGQAGGFGQTNYSAAKAGMLGFTKSLALELAKTN 178

Query: 205 IRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT 264
           + VN I P  + T M+          EE  + +   IP ++            G      
Sbjct: 179 VTVNAICPGFIDTEMVAEV------PEEVRQKIVAKIPKKR-----------FG------ 215

Query: 265 LRSKDIAEAALYLASDESRYVSGHNLVVDGGV 296
            ++ +IA+  +YL  D + Y++G  L ++GG+
Sbjct: 216 -QADEIAKGVVYLCRDGA-YITGQQLNINGGL 245

Length = 247

>gnl|CDD|135631 PRK05867, PRK05867, short chain dehydrogenase; Provisional

 Score =  109 bits (274), Expect = 2e-28
 Identities = 86/274 (31%), Positives = 134/274 (48%), Gaps = 34/274 (12%)

Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAP--APVTFVHCD 86
           L GK A+ITG + GIG+     +   GA+V IA         LA  +      V  V CD
Sbjct: 7   LHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCD 66

Query: 87  VSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMA 146
           VS  + + ++++   +  G +DI   NAG++        ++D   +EF  +   NV G+ 
Sbjct: 67  VSQHQQVTSMLDQVTAELGGIDIAVCNAGIITVT----PMLDMPLEEFQRLQNTNVTGVF 122

Query: 147 LGIKHAARVMINRG-GGCIISTASVAGVMGGLGPHA--YTASKHAIVGLTKNAACELGRY 203
           L  + AA+ M+ +G GG II+TAS++G +  +      Y ASK A++ LTK  A EL  +
Sbjct: 123 LTAQAAAKAMVKQGQGGVIINTASMSGHIINVPQQVSHYCASKAAVIHLTKAMAVELAPH 182

Query: 204 GIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGT 263
            IRVN +SP  + T +                     +    E + + E    LG L   
Sbjct: 183 KIRVNSVSPGYILTEL---------------------VEPYTEYQPLWEPKIPLGRLG-- 219

Query: 264 TLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
             R +++A   LYLAS+ S Y++G ++V+DGG T
Sbjct: 220 --RPEELAGLYLYLASEASSYMTGSDIVIDGGYT 251

Length = 253

>gnl|CDD|236207 PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  113 bits (285), Expect = 2e-28
 Identities = 71/219 (32%), Positives = 107/219 (48%), Gaps = 25/219 (11%)

Query: 12  QGIHVLAWDDAPPS--HRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGS 69
           Q + V A D APP+   R L GKVA++TG ARGIG A   + AR GA VV  DV    G 
Sbjct: 189 QVVRVGAADAAPPADWDRPLAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAA-GE 247

Query: 70  VLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDF 129
            LA+       T +  D++  +    +      R+G LDI+ +NAG+     + K++ + 
Sbjct: 248 ALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLDIVVHNAGIT----RDKTLANM 303

Query: 130 DADEFDNVMRVNVKGMALGIKHAARVMINRG---------GGCIISTASVAGVMGGLGPH 180
           D   +D+V+ VN+          A + I            GG I+  +S++G+ G  G  
Sbjct: 304 DEARWDSVLAVNL---------LAPLRITEALLAAGALGDGGRIVGVSSISGIAGNRGQT 354

Query: 181 AYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSM 219
            Y ASK  ++GL +  A  L   GI +N ++P  + T M
Sbjct: 355 NYAASKAGVIGLVQALAPLLAERGITINAVAPGFIETQM 393

Length = 450

>gnl|CDD|181517 PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  109 bits (275), Expect = 2e-28
 Identities = 82/277 (29%), Positives = 131/277 (47%), Gaps = 32/277 (11%)

Query: 27  RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIA-DVEDTLGSVLASTLAPAPVTFVHC 85
            ++  +  ++TGG+RG+G A  R FAR GA+VV+     +     LA  L    +  +  
Sbjct: 1   MQISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIA-LQA 59

Query: 86  DVSLEEDIENLINSTVSRYGR-LDILYNNAGVL----GNQRKHKSIIDFDADEFDNVMRV 140
           DV+  E ++ +  +    +G+ +  + NNA       G+ RK     D   ++F   +  
Sbjct: 60  DVTDREQVQAMFATATEHFGKPITTVVNNALADFSFDGDARK--KADDITWEDFQQQLEG 117

Query: 141 NVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACEL 200
           +VKG    I+ A   M  +G G II+  +       +  H YT +K A++GLT+N A EL
Sbjct: 118 SVKGALNTIQAALPGMREQGFGRIINIGTNLFQNPVVPYHDYTTAKAALLGLTRNLAAEL 177

Query: 201 GRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNL 260
           G YGI VN +S   + T+               DE  +  I +   +RK+          
Sbjct: 178 GPYGITVNMVSGGLLRTT--------DASAATPDEVFDL-IAATTPLRKV---------- 218

Query: 261 KGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
             TT   ++ A+A L+ AS  +R V+G NLVVDGG+ 
Sbjct: 219 --TT--PQEFADAVLFFASPWARAVTGQNLVVDGGLV 251

Length = 253

>gnl|CDD|187640 cd08935, mannonate_red_SDR_c, putative D-mannonate oxidoreductase, classical (c) SDR

 Score =  109 bits (275), Expect = 2e-28
 Identities = 78/284 (27%), Positives = 122/284 (42%), Gaps = 38/284 (13%)

Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADV-EDTLGSVLAS-TLAPAPVTFVHCD 86
           L+ KVA+ITGG   +G A  R  A+ GAKV      ++    V    T        +  D
Sbjct: 3   LKNKVAVITGGTGVLGGAMARALAQAGAKVAALGRNQEKGDKVAKEITALGGRAIALAAD 62

Query: 87  VSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRK------------HKSIIDFDADEF 134
           V     +E      V+++G +DIL N AG  GN                ++  D D + +
Sbjct: 63  VLDRASLERAREEIVAQFGTVDILINGAG--GNHPDATTDPEHYEPETEQNFFDLDEEGW 120

Query: 135 DNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTK 194
           + V  +N+ G  L  +   + M+ + GG II+ +S+          AY+A+K A+   T+
Sbjct: 121 EFVFDLNLNGSFLPSQVFGKDMLEQKGGSIINISSMNAFSPLTKVPAYSAAKAAVSNFTQ 180

Query: 195 NAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRK--MEE 252
             A E    G+RVN I+P    T        N  DG   D        S K + +  M  
Sbjct: 181 WLAVEFATTGVRVNAIAPGFFVTPQNRKLLINP-DGSYTDR-------SNKILGRTPMGR 232

Query: 253 FVSGLGNLKGTTLRSKDIAEAALYLASDE-SRYVSGHNLVVDGG 295
           F            + +++  A L+LAS++ S +V+G  + VDGG
Sbjct: 233 FG-----------KPEELLGALLFLASEKASSFVTGVVIPVDGG 265

D-mannonate oxidoreductase catalyzes the NAD-dependent interconversion of D-mannonate and D-fructuronate. This subgroup includes Bacillus subtitils UxuB/YjmF, a putative D-mannonate oxidoreductase; the B. subtilis UxuB gene is part of a putative ten-gene operon (the Yjm operon) involved in hexuronate catabolism. Escherichia coli UxuB does not belong to this subgroup. This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 271

>gnl|CDD|183773 PRK12824, PRK12824, acetoacetyl-CoA reductase; Provisional

 Score =  109 bits (273), Expect = 2e-28
 Identities = 69/267 (25%), Positives = 115/267 (43%), Gaps = 31/267 (11%)

Query: 32  KVAIITGGARGIGEAAVRLFARHGAKVVIADV---EDTLGSVLASTLAPAPVTFVHCDVS 88
           K+A++TG  RGIG A  R     G +V+       +               V     DV+
Sbjct: 3   KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVT 62

Query: 89  LEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALG 148
             E+    +       G +DIL NNAG+     +          E+++V+  N+  +   
Sbjct: 63  DTEECAEALAEIEEEEGPVDILVNNAGI----TRDSVFKRMSHQEWNDVINTNLNSVFNV 118

Query: 149 IKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVN 208
            +     M  +G G II+ +SV G+ G  G   Y+A+K  ++G TK  A E  RYGI VN
Sbjct: 119 TQPLFAAMCEQGYGRIINISSVNGLKGQFGQTNYSAAKAGMIGFTKALASEGARYGITVN 178

Query: 209 CISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSK 268
           CI+P  +AT M V             E +   I +Q  ++++                 +
Sbjct: 179 CIAPGYIATPM-VEQMG--------PE-VLQSIVNQIPMKRLGT--------------PE 214

Query: 269 DIAEAALYLASDESRYVSGHNLVVDGG 295
           +IA A  +L S+ + +++G  + ++GG
Sbjct: 215 EIAAAVAFLVSEAAGFITGETISINGG 241

Length = 245

>gnl|CDD|187643 cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR

 Score =  108 bits (273), Expect = 2e-28
 Identities = 60/198 (30%), Positives = 90/198 (45%), Gaps = 10/198 (5%)

Query: 31  GKVAIITGGARGIGEAAVRLFARHGAKVVI-ADVEDTLGSVLASTLAPAP-----VTFVH 84
           GK  +ITGG+ GIG+A  +   + GA V+I A  E  L   +    A A      V+++ 
Sbjct: 1   GKHVLITGGSSGIGKALAKELVKEGANVIIVARSESKLEEAVEEIEAEANASGQKVSYIS 60

Query: 85  CDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKG 144
            D+S  E++E      V + G  D++ N AG+           D  A+EF+  M VN  G
Sbjct: 61  ADLSDYEEVEQAFAQAVEKGGPPDLVVNCAGIS----IPGLFEDLTAEEFERGMDVNYFG 116

Query: 145 MALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYG 204
                     +M  +  G I+  +S A ++G  G  AY  SK A+ GL ++   EL  Y 
Sbjct: 117 SLNVAHAVLPLMKEQRPGHIVFVSSQAALVGIYGYSAYCPSKFALRGLAESLRQELKPYN 176

Query: 205 IRVNCISPFGVATSMLVN 222
           IRV+ + P    T     
Sbjct: 177 IRVSVVYPPDTDTPGFEE 194

These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 239

>gnl|CDD|187583 cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehydrogenase (SDH), classical (c) SDRs

 Score =  109 bits (273), Expect = 3e-28
 Identities = 69/272 (25%), Positives = 121/272 (44%), Gaps = 24/272 (8%)

Query: 30  EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLA----PAPVTFVHC 85
             +VA++ GG + +GE      A  G  V +AD+       +A  +          F   
Sbjct: 1   MNQVAVVIGGGQTLGEFLCHGLAEAGYDVAVADINSENAEKVADEINAEYGEKAYGFG-A 59

Query: 86  DVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGM 145
           D + E+ +  L       + R+D+L  +AG+     K   I DF+  +FD  ++VN+ G 
Sbjct: 60  DATNEQSVIALSKGVDEIFKRVDLLVYSAGI----AKSAKITDFELGDFDRSLQVNLVGY 115

Query: 146 ALGIKHAARVMINRG-GGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYG 204
            L  +  +++MI  G  G II   S +G +G      Y+A+K   VGLT++ A +L  +G
Sbjct: 116 FLCAREFSKLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFGGVGLTQSLALDLAEHG 175

Query: 205 IRVNCISPFGVATSMLVNAWRNSG-DGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGT 263
           I VN +        ML N  ++              GI  + EV +   ++  +   +G 
Sbjct: 176 ITVNSL--------MLGNLLKSPMFQSLLPQYAKKLGIK-ESEVEQY--YIDKVPLKRGC 224

Query: 264 TLRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
               +D+    L+ AS ++ Y +G ++ + GG
Sbjct: 225 DY--QDVLNMLLFYASPKASYCTGQSINITGG 254

Sorbitol 6-phosphate dehydrogenase (SDH, aka glucitol 6-phosphate dehydrogenase) catalyzes the NAD-dependent interconversion of D-fructose 6-phosphate to D-sorbitol 6-phosphate. SDH is a member of the classical SDRs, with the characteristic catalytic tetrad, but without a complete match to the typical NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|180411 PRK06123, PRK06123, short chain dehydrogenase; Provisional

 Score =  108 bits (272), Expect = 4e-28
 Identities = 87/281 (30%), Positives = 122/281 (43%), Gaps = 53/281 (18%)

Query: 32  KVAIITGGARGIGEAAVRLFARHG-------------AKVVIADVEDTLGSVLASTLAPA 78
           KV IITG +RGIG A   L A  G             A+ V+  +    G  LA      
Sbjct: 3   KVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALA------ 56

Query: 79  PVTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVM 138
               V  DV+ E D+  L  +     GRLD L NNAG+L  Q +   +   DA     + 
Sbjct: 57  ----VAADVADEADVLRLFEAVDRELGRLDALVNNAGILEAQMR---LEQMDAARLTRIF 109

Query: 139 RVNVKGMALGIKHAARVMINRGGGC---IISTASVAGVMGGLGPHA-YTASKHAIVGLTK 194
             NV G  L  + A + M  R GG    I++ +S+A  +G  G +  Y ASK AI  +T 
Sbjct: 110 ATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPGEYIDYAASKGAIDTMTI 169

Query: 195 NAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFV 254
             A E+   GIRVN + P  + T +       SG      + +  GIP  +         
Sbjct: 170 GLAKEVAAEGIRVNAVRPGVIYTEI-----HASGGEPGRVDRVKAGIPMGR--------- 215

Query: 255 SGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
                  GT   ++++A A L+L SDE+ Y +G  + V GG
Sbjct: 216 ------GGT---AEEVARAILWLLSDEASYTTGTFIDVSGG 247

Length = 248

>gnl|CDD|181120 PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  109 bits (273), Expect = 9e-28
 Identities = 71/201 (35%), Positives = 104/201 (51%), Gaps = 21/201 (10%)

Query: 25  SHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIAD------VEDTLGSVLASTLAPA 78
           +   L GKVA++TG A G+G A     AR GA VV+ D        D L  + A   A A
Sbjct: 6   NTTDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRA---AGA 62

Query: 79  PVTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVM 138
               V  D+S     + L+ + V   G LDI+ NNAG+     + + + +   +E+D V+
Sbjct: 63  KAVAVAGDISQRATADELVATAVG-LGGLDIVVNNAGIT----RDRMLFNMSDEEWDAVI 117

Query: 139 RVNVKGMALGIKHAA---RVMINRGGGC----IISTASVAGVMGGLGPHAYTASKHAIVG 191
            V+++G  L  ++AA   R      GG     I++T+S AG++G +G   Y A+K  I  
Sbjct: 118 AVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGPVGQANYGAAKAGITA 177

Query: 192 LTKNAACELGRYGIRVNCISP 212
           LT +AA  LGRYG+R N I P
Sbjct: 178 LTLSAARALGRYGVRANAICP 198

Length = 306

>gnl|CDD|212493 cd08932, HetN_like_SDR_c, HetN oxidoreductase-like, classical (c) SDR

 Score =  106 bits (267), Expect = 1e-27
 Identities = 53/194 (27%), Positives = 83/194 (42%), Gaps = 16/194 (8%)

Query: 32  KVAIITGGARGIGEAAVRLFARHGAKVV-----IADVEDTLGSVLASTLAPAPVTFVHCD 86
           KVA++TG +RGIG    R  AR G +V        D+     S          V  V  D
Sbjct: 1   KVALVTGASRGIGIEIARALARDGYRVSLGLRNPEDLAALSASG-------GDVEAVPYD 53

Query: 87  VSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMA 146
               ED   L+++   R+GR+D+L +NAG+        ++ +    E +    +NV   A
Sbjct: 54  ARDPEDARALVDALRDRFGRIDVLVHNAGIGR----PTTLREGSDAELEAHFSINVIAPA 109

Query: 147 LGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIR 206
              +     +   G G ++   S++G     G   Y+ASK A+  L      E   +G+R
Sbjct: 110 ELTRALLPALREAGSGRVVFLNSLSGKRVLAGNAGYSASKFALRALAHALRQEGWDHGVR 169

Query: 207 VNCISPFGVATSML 220
           V+ + P  V T M 
Sbjct: 170 VSAVCPGFVDTPMA 183

This subgroup includes Anabaena sp. strain PCC 7120 HetN, a putative oxidoreductase involved in heterocyst differentiation, and related proteins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 223

>gnl|CDD|187597 cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) and human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score =  107 bits (268), Expect = 1e-27
 Identities = 67/200 (33%), Positives = 93/200 (46%), Gaps = 22/200 (11%)

Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTF------ 82
           L GKVA +TG +RGIG A     A+ GA VV+A    T       +    P T       
Sbjct: 1   LSGKVAFVTGASRGIGRAIALRLAKAGATVVVA--AKTASEGDNGSAKSLPGTIEETAEE 58

Query: 83  ----------VHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDAD 132
                     +  DV  E+ +  L+ +TV ++GRLDIL NNAG +        + D  A 
Sbjct: 59  IEAAGGQALPIVVDVRDEDQVRALVEATVDQFGRLDILVNNAGAIWLS----LVEDTPAK 114

Query: 133 EFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGL 192
            FD + RVN++G  L  + A   M+  G G I++ +    +    G  AY A K  +  L
Sbjct: 115 RFDLMQRVNLRGTYLLSQAALPHMVKAGQGHILNISPPLSLRPARGDVAYAAGKAGMSRL 174

Query: 193 TKNAACELGRYGIRVNCISP 212
           T   A EL R+GI VN + P
Sbjct: 175 TLGLAAELRRHGIAVNSLWP 194

This subgroup includes human DHRS1 and human HSDL2 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|236210 PRK08267, PRK08267, short chain dehydrogenase; Provisional

 Score =  106 bits (268), Expect = 2e-27
 Identities = 63/186 (33%), Positives = 93/186 (50%), Gaps = 5/186 (2%)

Query: 36  ITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIEN 95
           ITG A GIG A   LFA  G +V   D+ +   + LA+ L          DV+     + 
Sbjct: 6   ITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDA 65

Query: 96  -LINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAAR 154
            L +   +  GRLD+L+NNAG+L    +     D   +  D V+ +NVKG+  G   A  
Sbjct: 66  ALADFAAATGGRLDVLFNNAGIL----RGGPFEDIPLEAHDRVIDINVKGVLNGAHAALP 121

Query: 155 VMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFG 214
            +    G  +I+T+S + + G  G   Y+A+K A+ GLT+    E  R+GIRV  + P  
Sbjct: 122 YLKATPGARVINTSSASAIYGQPGLAVYSATKFAVRGLTEALDLEWRRHGIRVADVMPLF 181

Query: 215 VATSML 220
           V T+ML
Sbjct: 182 VDTAML 187

Length = 260

>gnl|CDD|181668 PRK09135, PRK09135, pteridine reductase; Provisional

 Score =  106 bits (266), Expect = 3e-27
 Identities = 80/285 (28%), Positives = 122/285 (42%), Gaps = 64/285 (22%)

Query: 30  EGKVAIITGGARGIGEAAVRLFARHGAKVVI-----ADVEDTLGSVLASTLAPAPVTFVH 84
             KVA+ITGGAR IG A  R     G +V I     A   D L + L + L P     + 
Sbjct: 5   SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNA-LRPGSAAALQ 63

Query: 85  CDVSLEEDIENLINSTVSRYGRLDILYNNAGV-----LGNQRKHKSIIDFDADEFDNVMR 139
            D+   + +  L+ + V+ +GRLD L NNA       LG              ++D++  
Sbjct: 64  ADLLDPDALPELVAACVAAFGRLDALVNNASSFYPTPLG---------SITEAQWDDLFA 114

Query: 140 VNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHA---------YTASKHAIV 190
            N+K     +  AA   + +  G I++   +         HA         Y A+K A+ 
Sbjct: 115 SNLKA-PFFLSQAAAPQLRKQRGAIVNITDI---------HAERPLKGYPVYCAAKAALE 164

Query: 191 GLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKM 250
            LT++ A EL    +RVN ++P G         W    DG   DE     I ++  ++++
Sbjct: 165 MLTRSLALELAP-EVRVNAVAP-GA------ILWPE--DGNSFDEEARQAILARTPLKRI 214

Query: 251 EEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
                      GT    +DIAEA  +L +D S +++G  L VDGG
Sbjct: 215 -----------GT---PEDIAEAVRFLLADAS-FITGQILAVDGG 244

Length = 249

>gnl|CDD|187634 cd08929, SDR_c4, classical (c) SDR, subgroup 4

 Score =  105 bits (264), Expect = 3e-27
 Identities = 64/191 (33%), Positives = 91/191 (47%), Gaps = 15/191 (7%)

Query: 32  KVAIITGGARGIGEAAVRLFARHGAKVVI-----ADVEDTLGSVLASTLAPAPVTFVHCD 86
           K A++TG +RGIGEA  RL    G +V I     A +       L   L  A       D
Sbjct: 1   KAALVTGASRGIGEATARLLHAEGYRVGICARDEARLAAAAAQELEGVLGLA------GD 54

Query: 87  VSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMA 146
           V  E D+   +++    +G LD L NNAGV       K + +   +E+  V+  N+ G  
Sbjct: 55  VRDEADVRRAVDAMEEAFGGLDALVNNAGV----GVMKPVEELTPEEWRLVLDTNLTGAF 110

Query: 147 LGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIR 206
             I  AA  ++ RGGG I++  S+AG     G  AY ASK  ++GL++ A  +L    IR
Sbjct: 111 YCIHKAAPALLRRGGGTIVNVGSLAGKNAFKGGAAYNASKFGLLGLSEAAMLDLREANIR 170

Query: 207 VNCISPFGVAT 217
           V  + P  V T
Sbjct: 171 VVNVMPGSVDT 181

This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 226

>gnl|CDD|235545 PRK05650, PRK05650, short chain dehydrogenase; Provisional

 Score =  106 bits (267), Expect = 3e-27
 Identities = 49/179 (27%), Positives = 84/179 (46%), Gaps = 6/179 (3%)

Query: 36  ITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL--APAPVTFVHCDVSLEEDI 93
           ITG A G+G A    +AR G ++ +ADV +  G      L  A     +  CDV     +
Sbjct: 5   ITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQL 64

Query: 94  ENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAA 153
             L  +   ++G +D++ NNAGV           +   +++D  + +N+ G+  G K   
Sbjct: 65  TALAQACEEKWGGIDVIVNNAGV----ASGGFFEELSLEDWDWQIAINLMGVVKGCKAFL 120

Query: 154 RVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISP 212
            +   +  G I++ AS+AG+M G    +Y  +K  +V L++    EL    I V+ + P
Sbjct: 121 PLFKRQKSGRIVNIASMAGLMQGPAMSSYNVAKAGVVALSETLLVELADDEIGVHVVCP 179

Length = 270

>gnl|CDD|180604 PRK06523, PRK06523, short chain dehydrogenase; Provisional

 Score =  105 bits (265), Expect = 6e-27
 Identities = 77/285 (27%), Positives = 119/285 (41%), Gaps = 50/285 (17%)

Query: 27  RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCD 86
             L GK A++TGG +GIG A V      GA+VV      T  S       P  V FV  D
Sbjct: 5   LELAGKRALVTGGTKGIGAATVARLLEAGARVVT-----TARSRPDDL--PEGVEFVAAD 57

Query: 87  VSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMA 146
           ++  E    +  + + R G +DIL +  G  G+            +E+ + + +N+  +A
Sbjct: 58  LTTAEGCAAVARAVLERLGGVDILVHVLG--GSSAPAGGFAALTDEEWQDELNLNL--LA 113

Query: 147 LGIKHAARV-------MINRGGGCIISTASVAGVMGGLGPH-AYTASKHAIVGLTKNAAC 198
                A R+       MI RG G II   S+   +       AY A+K A+   +K+ + 
Sbjct: 114 -----AVRLDRALLPGMIARGSGVIIHVTSIQRRLPLPESTTAYAAAKAALSTYSKSLSK 168

Query: 199 ELGRYGIRVNCISPFGVATS---MLVNAWRNSGDGEEED---ECMNF--GIPSQKEVRKM 250
           E+   G+RVN +SP  + T     L      +   + E      M+   GIP        
Sbjct: 169 EVAPKGVRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQIIMDSLGGIP-------- 220

Query: 251 EEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
                 LG         +++AE   +LASD +  ++G   V+DGG
Sbjct: 221 ------LGR-PAEP---EEVAELIAFLASDRAASITGTEYVIDGG 255

Length = 260

>gnl|CDD|180773 PRK06949, PRK06949, short chain dehydrogenase; Provisional

 Score =  105 bits (263), Expect = 1e-26
 Identities = 85/279 (30%), Positives = 129/279 (46%), Gaps = 41/279 (14%)

Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVE-DTLGSVLASTLAP-APVTFVHCD 86
           LEGKVA++TG + G+G    ++ A+ GAKVV+A    + L  + A   A       V  D
Sbjct: 7   LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLD 66

Query: 87  VSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMA 146
           V+  + I+  +    +  G +DIL NN+GV   Q+    ++D    +FD V   N +G  
Sbjct: 67  VTDYQSIKAAVAHAETEAGTIDILVNNSGVSTTQK----LVDVTPADFDFVFDTNTRGAF 122

Query: 147 LGIKHAARVMINRGGGC--------IISTASVAG--VMGGLGPHAYTASKHAIVGLTKNA 196
              +  A+ MI R  G         II+ ASVAG  V+  +G   Y  SK A+V +T+  
Sbjct: 123 FVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVLPQIG--LYCMSKAAVVHMTRAM 180

Query: 197 ACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSG 256
           A E GR+GI VN I P  + T +  + W                   QK V  +     G
Sbjct: 181 ALEWGRHGINVNAICPGYIDTEINHHHWETEQ--------------GQKLVSMLPRKRVG 226

Query: 257 LGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
                    + +D+    L LA+DES++++G  +  D G
Sbjct: 227 ---------KPEDLDGLLLLLAADESQFINGAIISADDG 256

Length = 258

>gnl|CDD|187649 cd08945, PKR_SDR_c, Polyketide ketoreductase, classical (c) SDR

 Score =  104 bits (262), Expect = 1e-26
 Identities = 66/192 (34%), Positives = 93/192 (48%), Gaps = 8/192 (4%)

Query: 32  KVAIITGGARGIGEAAVRLFARHGAKVVIA--DVEDTLGSVLASTLAPAPVTFVHCDVSL 89
           +VA++TG   GIG A  R   + G +V +     E    +V     A        CDV  
Sbjct: 4   EVALVTGATSGIGLAIARRLGKEGLRVFVCARGEEGLATTVKELREAGVEADGRTCDVRS 63

Query: 90  EEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGI 149
             +IE L+ + V+RYG +D+L NNAG  G      +  +   + + +V+  N+ G+    
Sbjct: 64  VPEIEALVAAAVARYGPIDVLVNNAGRSGG----GATAELADELWLDVVETNLTGVFRVT 119

Query: 150 KH--AARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRV 207
           K    A  M+ RG G II+ AS  G  G +    Y+ASKH +VG TK    EL R GI V
Sbjct: 120 KEVLKAGGMLERGTGRIINIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITV 179

Query: 208 NCISPFGVATSM 219
           N + P  V T M
Sbjct: 180 NAVCPGFVETPM 191

Polyketide ketoreductase (KR) is a classical SDR with a characteristic NAD-binding pattern and active site tetrad. Aromatic polyketides include various aromatic compounds of pharmaceutical interest. Polyketide KR, part of the type II polyketide synthase (PKS) complex, is comprised of stand-alone domains that resemble the domains found in fatty acid synthase and multidomain type I PKS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 258

>gnl|CDD|187642 cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase (DHB DH)-like, classical (c) SDR

 Score =  104 bits (261), Expect = 2e-26
 Identities = 76/273 (27%), Positives = 125/273 (45%), Gaps = 25/273 (9%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVH-CD 86
           R EGKV ++TG A+GIG       A  GA+V++ D  + +  VLA  LA      VH  D
Sbjct: 1   RFEGKVVVVTGAAQGIGRGVAERLAGEGARVLLVDRSELVHEVLAEILAAGDAAHVHTAD 60

Query: 87  VSLEEDIENLINSTVSRYGRLDILYNNAG--VLGNQRKHKSIIDFDADEFDNVMRVNVKG 144
           +      + ++ + V R+GR+D+L NN G  +     +H     ++ ++ +  +R ++  
Sbjct: 61  LETYAGAQGVVRAAVERFGRVDVLINNVGGTIWAKPYEH-----YEEEQIEAEIRRSLFP 115

Query: 145 MALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYG 204
                +     M+ R  G I++ +S+A   G      Y+A+K  +  LT + A E  R G
Sbjct: 116 TLWCCRAVLPHMLERQQGVIVNVSSIA-TRGIYRI-PYSAAKGGVNALTASLAFEHARDG 173

Query: 205 IRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFV--SGLGNLKG 262
           IRVN ++P G          +            N    S++E    +  V  +   +L G
Sbjct: 174 IRVNAVAPGGTEAP----PRKIP---------RNAAPMSEQEKVWYQRIVDQTLDSSLMG 220

Query: 263 TTLRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
                 +   A L+LASDE+ Y++G  L V GG
Sbjct: 221 RYGTIDEQVRAILFLASDEASYITGTVLPVGGG 253

DHB DH (aka 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase) catalyzes the NAD-dependent conversion of 1,2-dihydroxycyclohexa-3,4-diene carboxylate to a catechol. This subgroup also contains Pseudomonas putida F1 CmtB, 2,3-dihydroxy-2,3-dihydro-p-cumate dehydrogenase, the second enzyme in the pathway for catabolism of p-cumate catabolism. This subgroup shares the glycine-rich NAD-binding motif of the classical SDRs and shares the same catalytic triad; however, the upstream Asn implicated in cofactor binding or catalysis in other SDRs is generally substituted by a Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|222222 pfam13561, adh_short_C2, Enoyl-(Acyl carrier protein) reductase

 Score =  103 bits (260), Expect = 2e-26
 Identities = 72/266 (27%), Positives = 111/266 (41%), Gaps = 35/266 (13%)

Query: 38  GGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPA-PVTFVHCDVSLEEDIENL 96
                I  A  +  A  GA+VV+      L       LA   P   +  DV+ +EDI+ L
Sbjct: 3   ADDNSIAWAIAKAAAEEGAEVVLTTWPPALRMGAVDELAKELPADVIPLDVTSDEDIDEL 62

Query: 97  INSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVM 156
                   G++D L ++  +    RK K  +D   + F   + ++        K A  +M
Sbjct: 63  FEKVKEDGGKIDFLVHSIAMSPEIRKGKPYLDTSREGFLKALDISAYSFISLAKAAKPLM 122

Query: 157 INRGGGCIISTASVAG--VMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFG 214
               GG I++ + +A   V  G G      +K A+  L +  A ELGR GIRVN IS   
Sbjct: 123 NE--GGSIVALSYIAAERVFPGYG--GMGVAKAALESLARYLAYELGRKGIRVNTISAGP 178

Query: 215 VATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEF---VSGLGNLKGTTLRSKDIA 271
             T+        +G           GI       KM E+   ++ LG        ++++A
Sbjct: 179 TKTT--------AGS----------GIGGF---DKMVEYAEEMAPLGR----NASAEEVA 213

Query: 272 EAALYLASDESRYVSGHNLVVDGGVT 297
            AA +L SD +R ++G  L VDGG +
Sbjct: 214 NAAAFLLSDLARGITGQILYVDGGFS 239

Length = 239

>gnl|CDD|187604 cd05346, SDR_c5, classical (c) SDR, subgroup 5

 Score =  103 bits (260), Expect = 2e-26
 Identities = 79/259 (30%), Positives = 117/259 (45%), Gaps = 46/259 (17%)

Query: 32  KVAIITGGARGIGEAAVRLFARHGAKVVIA--------DVEDTLGSVLASTLAPAPVTFV 83
           K  +ITG + GIGEA  R FA+ GAK+++         ++ D LG+     + P  +   
Sbjct: 1   KTVLITGASSGIGEATARRFAKAGAKLILTGRRAERLQELADELGAKFPVKVLPLQL--- 57

Query: 84  HCDVSLEEDIENLINSTVSRYGRLDILYNNAG-VLGNQRKHKSIIDFDADEFDNVMRVNV 142
             DVS  E IE  + +    +  +DIL NNAG  LG         + D ++++ ++  NV
Sbjct: 58  --DVSDRESIEAALENLPEEFRDIDILVNNAGLALGLD----PAQEADLEDWETMIDTNV 111

Query: 143 KGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGR 202
           KG+    +    +MI R  G II+  S+AG     G + Y A+K A+   + N   +L  
Sbjct: 112 KGLLNVTRLILPIMIARNQGHIINLGSIAGRYPYAGGNVYCATKAAVRQFSLNLRKDLIG 171

Query: 203 YGIRVNCISPFGVATSM-LVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLK 261
            GIRV  I P  V T   LV   R  GD E+ D+                         +
Sbjct: 172 TGIRVTNIEPGLVETEFSLV---RFHGDKEKADKVY-----------------------E 205

Query: 262 GTT-LRSKDIAEAALYLAS 279
           G   L  +DIAE  L++AS
Sbjct: 206 GVEPLTPEDIAETILWVAS 224

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|223377 COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only]

 Score =  104 bits (261), Expect = 2e-26
 Identities = 52/194 (26%), Positives = 90/194 (46%), Gaps = 7/194 (3%)

Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVV-IADVEDTLGSVLA--STLAPAPVTFVHC 85
           ++GK A+ITG + GIG    +  AR G  ++ +A  ED L ++           V  +  
Sbjct: 4   MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPA 63

Query: 86  DVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGM 145
           D+S  E +E L +    R G +D+L NNAG           ++   DE + ++++N+  +
Sbjct: 64  DLSDPEALERLEDELKERGGPIDVLVNNAGFGTF----GPFLELSLDEEEEMIQLNILAL 119

Query: 146 ALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGI 205
               K     M+ RG G II+  S AG++       Y+A+K  ++  ++    EL   G+
Sbjct: 120 TRLTKAVLPGMVERGAGHIINIGSAAGLIPTPYMAVYSATKAFVLSFSEALREELKGTGV 179

Query: 206 RVNCISPFGVATSM 219
           +V  + P    T  
Sbjct: 180 KVTAVCPGPTRTEF 193

Length = 265

>gnl|CDD|235725 PRK06179, PRK06179, short chain dehydrogenase; Provisional

 Score =  103 bits (260), Expect = 4e-26
 Identities = 59/204 (28%), Positives = 93/204 (45%), Gaps = 26/204 (12%)

Query: 30  EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSV--LASTLAPAPVTFVHCDV 87
             KVA++TG + GIG A     AR G +V         G+    A       V  +  DV
Sbjct: 3   NSKVALVTGASSGIGRATAEKLARAGYRVF--------GTSRNPARAAPIPGVELLELDV 54

Query: 88  SLEEDIENLINSTVSRYGRLDILYNNAGV-LGNQRKHKSIIDFDADEFDNVMRVNVKGMA 146
           + +  ++  ++  ++R GR+D+L NNAGV L    +  SI      +   +   NV G+ 
Sbjct: 55  TDDASVQAAVDEVIARAGRIDVLVNNAGVGLAGAAEESSI-----AQAQALFDTNVFGIL 109

Query: 147 LGIKHAARVMINRGGGCIISTASVAGV-----MGGLGPHAYTASKHAIVGLTKNAACELG 201
              +     M  +G G II+ +SV G      M       Y ASKHA+ G +++   E+ 
Sbjct: 110 RMTRAVLPHMRAQGSGRIINISSVLGFLPAPYMA-----LYAASKHAVEGYSESLDHEVR 164

Query: 202 RYGIRVNCISPFGVATSMLVNAWR 225
           ++GIRV+ + P    T+   NA  
Sbjct: 165 QFGIRVSLVEPAYTKTNFDANAPE 188

Length = 270

>gnl|CDD|132368 TIGR03325, BphB_TodD, cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

 Score =  103 bits (259), Expect = 4e-26
 Identities = 70/193 (36%), Positives = 100/193 (51%), Gaps = 4/193 (2%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDV 87
           RL+G+V ++TGGA G+G A V  F   GA+V + D +   G           V  V  DV
Sbjct: 2   RLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLD-KSAAGLQELEAAHGDAVVGVEGDV 60

Query: 88  SLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADE-FDNVMRVNVKGMA 146
              +D +  +   V+ +G++D L  NAG+         I D   DE FD V  +NVKG  
Sbjct: 61  RSLDDHKEAVARCVAAFGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYL 120

Query: 147 LGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIR 206
           L +K A   ++   G  +I T S AG     G   YTA+KHA+VGL K  A EL  Y +R
Sbjct: 121 LAVKAALPALVASRGS-VIFTISNAGFYPNGGGPLYTAAKHAVVGLVKELAFELAPY-VR 178

Query: 207 VNCISPFGVATSM 219
           VN ++P G+++ +
Sbjct: 179 VNGVAPGGMSSDL 191

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. Length = 262

>gnl|CDD|235628 PRK05855, PRK05855, short chain dehydrogenase; Validated

 Score =  106 bits (267), Expect = 8e-26
 Identities = 66/217 (30%), Positives = 100/217 (46%), Gaps = 18/217 (8%)

Query: 27  RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADV-----EDTLGSVLASTLAPAPVT 81
               GK+ ++TG   GIG      FAR GA+VV +D+     E T   + A+        
Sbjct: 311 GPFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYR 370

Query: 82  FVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGV--LGNQRKHKSIIDFDADEFDNVMR 139
               DVS  + +E       + +G  DI+ NNAG+   G        +D  A+++D V+ 
Sbjct: 371 ---VDVSDADAMEAFAEWVRAEHGVPDIVVNNAGIGMAG------GFLDTSAEDWDRVLD 421

Query: 140 VNVKGMALGIKHAARVMINRG-GGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAAC 198
           VN+ G+  G +   R M+ RG GG I++ AS A         AY  SK A++ L++    
Sbjct: 422 VNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSRSLPAYATSKAAVLMLSECLRA 481

Query: 199 ELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDE 235
           EL   GI V  I P G   + +V   R +G   E++ 
Sbjct: 482 ELAAAGIGVTAICP-GFVDTNIVATTRFAGADAEDEA 517

Length = 582

>gnl|CDD|187609 cd05351, XR_like_SDR_c, xylulose reductase-like, classical (c) SDRs

 Score =  101 bits (254), Expect = 1e-25
 Identities = 85/273 (31%), Positives = 126/273 (46%), Gaps = 35/273 (12%)

Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVV-IADVEDTLGSVLASTLAPAPVTFVHCDV 87
             GK A++TG  +GIG A V+  A+ GA+VV ++  +  L S++       PV     D+
Sbjct: 5   FAGKRALVTGAGKGIGRATVKALAKAGARVVAVSRTQADLDSLVRECPGIEPVCV---DL 61

Query: 88  SLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMAL 147
           S  +  E  + S     G +D+L NNA V   Q      ++   + FD    VNV+ +  
Sbjct: 62  SDWDATEEALGSV----GPVDLLVNNAAVAILQ----PFLEVTKEAFDRSFDVNVRAVIH 113

Query: 148 GIKHAARVMINRG-GGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIR 206
             +  AR MI RG  G I++ +S A          Y ++K A+  LTK  A ELG + IR
Sbjct: 114 VSQIVARGMIARGVPGSIVNVSSQASQRALTNHTVYCSTKAALDMLTKVMALELGPHKIR 173

Query: 207 VNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLR 266
           VN ++P  V T M  + W +     E+ + M   IP    + K  E              
Sbjct: 174 VNSVNPTVVMTDMGRDNWSDP----EKAKKMLNRIP----LGKFAEV------------- 212

Query: 267 SKDIAEAALYLASDESRYVSGHNLVVDGGVTTS 299
            +D+  A L+L SD+S   +G  L VDGG   S
Sbjct: 213 -EDVVNAILFLLSDKSSMTTGSTLPVDGGFLAS 244

Members of this subgroup include proteins identified as L-xylulose reductase (XR) and carbonyl reductase; they are members of the SDR family. XR, catalyzes the NADP-dependent reduction of L-xyulose and other sugars. Tetrameric mouse carbonyl reductase is involved in the metabolism of biogenic and xenobiotic carbonyl compounds. This subgroup also includes tetrameric chicken liver D-erythrulose reductase, which catalyzes the reduction of D-erythrulose to D-threitol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 244

>gnl|CDD|188169 TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reductase

 Score =  101 bits (253), Expect = 2e-25
 Identities = 78/267 (29%), Positives = 121/267 (45%), Gaps = 31/267 (11%)

Query: 32  KVAIITGGARGIGEAAVRLFARHGAKVV--IADVEDTLGSVLASTLAPA-PVTFVHCDVS 88
           ++A++TGG  GIG A  +  A+ G +V       E+   + L    A       V  DVS
Sbjct: 1   RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVS 60

Query: 89  LEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALG 148
             E  +  +    +  G +D+L NNAG+  +    K       +++  V+  N+  +   
Sbjct: 61  SFESCKAAVAKVEAELGPIDVLVNNAGITRDATFKK----MTYEQWSAVIDTNLNSVFNV 116

Query: 149 IKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVN 208
            +     M  RG G II+ +SV G  G  G   Y+A+K  ++G TK  A E    G+ VN
Sbjct: 117 TQPVIDGMRERGWGRIINISSVNGQKGQFGQTNYSAAKAGMIGFTKALAQEGATKGVTVN 176

Query: 209 CISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSK 268
            ISP  +AT M V A R     E+    +   IP  +           LG       R +
Sbjct: 177 TISPGYIATDM-VMAMR-----EDVLNSIVAQIPVGR-----------LG-------RPE 212

Query: 269 DIAEAALYLASDESRYVSGHNLVVDGG 295
           +IA A  +LAS+E+ Y++G  L ++GG
Sbjct: 213 EIAAAVAFLASEEAGYITGATLSINGG 239

This model represent acetoacetyl-CoA reductase, a member of the family short-chain-alcohol dehydrogenases. Note that, despite the precision implied by the enzyme name, the reaction of EC 1.1.1.36 is defined more generally as (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. Length = 242

>gnl|CDD|237188 PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  101 bits (253), Expect = 3e-25
 Identities = 55/199 (27%), Positives = 86/199 (43%), Gaps = 15/199 (7%)

Query: 32  KVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLA-----PAPVTFVHCD 86
            VA++TGG RGIG    R  A  G  + I D  D     LA+T          V F   D
Sbjct: 3   PVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEE--LAATQQELRALGVEVIFFPAD 60

Query: 87  VSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMA 146
           V+     E ++++  + +GR+D L NNAGV    +    ++D   + FD V+ +N++G  
Sbjct: 61  VADLSAHEAMLDAAQAAWGRIDCLVNNAGV--GVKVRGDLLDLTPESFDRVLAINLRGPF 118

Query: 147 LGIKHAARVMINRGG------GCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACEL 200
              +  A+ M+ +          I+  +SV  +M       Y  SK  +    +  A  L
Sbjct: 119 FLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSPNRGEYCISKAGLSMAAQLFAARL 178

Query: 201 GRYGIRVNCISPFGVATSM 219
              GI V  + P  + T M
Sbjct: 179 AEEGIGVYEVRPGLIKTDM 197

Length = 256

>gnl|CDD|187636 cd08931, SDR_c9, classical (c) SDR, subgroup 9

 Score =  100 bits (250), Expect = 4e-25
 Identities = 62/190 (32%), Positives = 90/190 (47%), Gaps = 5/190 (2%)

Query: 32  KVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEE 91
           K   ITG A GIG     LFAR+G  V + D+++   + LA+ L    V     DV+   
Sbjct: 1   KAIFITGAASGIGRETALLFARNGWFVGLYDIDEDGLAALAAELGAENVVAGALDVTDRA 60

Query: 92  DIENLINSTVSRYG-RLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIK 150
                +    +  G RLD L+NNAGV           D      D ++ +NVKG+  G  
Sbjct: 61  AWAAALADFAAATGGRLDALFNNAGVGRGGPFE----DVPLAAHDRMVDINVKGVLNGAY 116

Query: 151 HAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCI 210
            A   +    G  +I+TAS + + G      Y+A+K A+ GLT+    E  R+GIRV  +
Sbjct: 117 AALPYLKATPGARVINTASSSAIYGQPDLAVYSATKFAVRGLTEALDVEWARHGIRVADV 176

Query: 211 SPFGVATSML 220
            P+ V T +L
Sbjct: 177 WPWFVDTPIL 186

This subgroup has the canonical active site tetrad and NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 227

>gnl|CDD|187615 cd05357, PR_SDR_c, pteridine reductase (PR), classical (c) SDRs

 Score =  100 bits (250), Expect = 4e-25
 Identities = 69/268 (25%), Positives = 111/268 (41%), Gaps = 38/268 (14%)

Query: 32  KVAIITGGARGIGEAAVRLFARHGAKVVI-ADVEDTLGSVLASTLAPAPVTFVHC--DVS 88
            VA++TG A+ IG A     A  G +VV+  +  +     L   L     + V    D+S
Sbjct: 1   AVALVTGAAKRIGRAIAEALAAEGYRVVVHYNRSEAEAQRLKDELNALRNSAVLVQADLS 60

Query: 89  LEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALG 148
                 +L+ +    +GR D+L NNA           +     D +  +  +N+K   L 
Sbjct: 61  DFAACADLVAAAFRAFGRCDVLVNNASAFYPT----PLGQGSEDAWAELFGINLKAPYLL 116

Query: 149 IKHAARVMINRGGGCIISTASVAGVMGGLGPH-AYTASKHAIVGLTKNAACELGRYGIRV 207
           I+  AR +     G II+    A     L  + AY  SK A+ GLT++AA EL    IRV
Sbjct: 117 IQAFARRLAGSRNGSIINI-IDAMTDRPLTGYFAYCMSKAALEGLTRSAALELAPN-IRV 174

Query: 208 NCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRS 267
           N I+P      +L          E+ D         +  +++                 +
Sbjct: 175 NGIAP---GLILLP---------EDMDAEYRENALRKVPLKRRPS--------------A 208

Query: 268 KDIAEAALYLASDESRYVSGHNLVVDGG 295
           ++IA+A ++L    S Y++G  + VDGG
Sbjct: 209 EEIADAVIFLLD--SNYITGQIIKVDGG 234

Pteridine reductases (PRs), members of the SDR family, catalyzes the NAD-dependent reduction of folic acid, dihydrofolate and related compounds. In Leishmania, pteridine reductase (PTR1) acts to circumvent the anti-protozoan drugs that attack dihydrofolate reductase activity. Proteins in this subgroup have an N-terminal NAD-binding motif and a YxxxK active site motif, but have an Asp instead of the usual upstream catalytic Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 234

>gnl|CDD|187646 cd08942, RhlG_SDR_c, RhlG and related beta-ketoacyl reductases, classical (c) SDRs

 Score =  100 bits (250), Expect = 5e-25
 Identities = 80/274 (29%), Positives = 120/274 (43%), Gaps = 34/274 (12%)

Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVI-ADVEDTLGSVLASTLAPAPVTFVHCDV 87
           + GK+ ++TGG+RGIG    + F   GA+V+I A   +          A      +  D+
Sbjct: 4   VAGKIVLVTGGSRGIGRMIAQGFLEAGARVIISARKAEACADAAEELSAYGECIAIPADL 63

Query: 88  SLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMAL 147
           S EE IE L+     R  RLD+L NNAG          +  F    +D VM +NVK +  
Sbjct: 64  SSEEGIEALVARVAERSDRLDVLVNNAGATWG----APLEAFPESGWDKVMDINVKSVFF 119

Query: 148 GIKHAARVMINRGGGC-----IISTASVAGVMG-GLGPHAYTASKHAIVGLTKNAACELG 201
             + A   ++           +I+  S+AG++  GL  ++Y ASK A+  LT+  A EL 
Sbjct: 120 LTQ-ALLPLLRAAATAENPARVINIGSIAGIVVSGLENYSYGASKAAVHQLTRKLAKELA 178

Query: 202 RYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLK 261
              I VN I+P                 G    +   F + +     + EE    LG   
Sbjct: 179 GEHITVNAIAP-----------------GRFPSKMTAF-LLNDPAALEAEEKSIPLGRWG 220

Query: 262 GTTLRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
               R +D+A  A+ LAS    Y++G  + VDGG
Sbjct: 221 ----RPEDMAGLAIMLASRAGAYLTGAVIPVDGG 250

Pseudomonas aeruginosa RhlG is an SDR-family beta-ketoacyl reductase involved in Rhamnolipid biosynthesis. RhlG is similar to but distinct from the FabG family of beta-ketoacyl-acyl carrier protein (ACP) of type II fatty acid synthesis. RhlG and related proteins are classical SDRs, with a canonical active site tetrad and glycine-rich NAD(P)-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|236357 PRK08945, PRK08945, putative oxoacyl-(acyl carrier protein) reductase; Provisional

 Score = 99.6 bits (249), Expect = 9e-25
 Identities = 69/274 (25%), Positives = 116/274 (42%), Gaps = 44/274 (16%)

Query: 21  DAPPSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVI-----ADVEDTLGSVLASTL 75
              P    L+ ++ ++TG   GIG  A   +ARHGA V++       +E     + A+  
Sbjct: 2   HYQPKPDLLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGG 61

Query: 76  APAPVTFVHCDVS--LEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADE 133
               +  +  D+     ++ + L ++   ++GRLD + +NAG+LG       +   D + 
Sbjct: 62  PQPAI--IPLDLLTATPQNYQQLADTIEEQFGRLDGVLHNAGLLGELG---PMEQQDPEV 116

Query: 134 FDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLT 193
           + +VM+VNV    +  +    +++      ++ T+S  G  G     AY  SK A  G+ 
Sbjct: 117 WQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQGRANWGAYAVSKFATEGMM 176

Query: 194 KNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEF 253
           +  A E     +RVNCI+P G  T+M  +A+        ED       P           
Sbjct: 177 QVLADEYQGTNLRVNCINPGGTRTAMRASAFPG------ED-------PQ---------- 213

Query: 254 VSGLGNLKGTTLRSKDIAEAALYLASDESRYVSG 287
                 LK      +DI    LYL  D+SR  +G
Sbjct: 214 -----KLKTP----EDIMPLYLYLMGDDSRRKNG 238

Length = 247

>gnl|CDD|183772 PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

 Score = 99.2 bits (248), Expect = 2e-24
 Identities = 79/276 (28%), Positives = 128/276 (46%), Gaps = 31/276 (11%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAP-APVTFVHCD 86
           R  GKV ++TG A+GIG       A  GA+VV+ D  + +  V A   A       +  D
Sbjct: 5   RFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELVHEVAAELRAAGGEALALTAD 64

Query: 87  VSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMA 146
           +      +  + + V  +GR+D+L NN G  G     K   +++ ++ +  +R ++    
Sbjct: 65  LETYAGAQAAMAAAVEAFGRIDVLINNVG--GTIWA-KPFEEYEEEQIEAEIRRSLFP-T 120

Query: 147 LGIKHAA-RVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGI 205
           L    A    M+ +GGG I++ +S+A    G+    Y+A+K  +  LT + A E   +GI
Sbjct: 121 LWCCRAVLPHMLAQGGGAIVNVSSIA--TRGINRVPYSAAKGGVNALTASLAFEYAEHGI 178

Query: 206 RVNCISPFGV-ATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT 264
           RVN ++P G  A    V   RN+               S++E    ++ V        ++
Sbjct: 179 RVNAVAPGGTEAPPRRVP--RNAAP------------QSEQEKAWYQQIVD---QTLDSS 221

Query: 265 L--RSKDIAE---AALYLASDESRYVSGHNLVVDGG 295
           L  R   I E   A L+LASDE+ Y++G  L V GG
Sbjct: 222 LMKRYGTIDEQVAAILFLASDEASYITGTVLPVGGG 257

Length = 260

>gnl|CDD|187639 cd08934, CAD_SDR_c, clavulanic acid dehydrogenase (CAD), classical (c) SDR

 Score = 98.0 bits (244), Expect = 3e-24
 Identities = 62/195 (31%), Positives = 92/195 (47%), Gaps = 10/195 (5%)

Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL--APAPVTFVHCD 86
           L+GKVA++TG + GIGEA  R  A  GA V IA         LA  L         +  D
Sbjct: 1   LQGKVALVTGASSGIGEATARALAAEGAAVAIAARRVDRLEALADELEAEGGKALVLELD 60

Query: 87  VSLEEDIENLINSTVSRYGRLDILYNNAGV--LGNQRKHKSIIDFDADEFDNVMRVNVKG 144
           V+ E+ ++  +  TV   GRLDIL NNAG+  LG       + D D  ++  ++  N+ G
Sbjct: 61  VTDEQQVDAAVERTVEALGRLDILVNNAGIMLLG------PVEDADTTDWTRMIDTNLLG 114

Query: 145 MALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYG 204
           +      A    + R  G I++ +SVAG +       Y A+K  +   ++    E+   G
Sbjct: 115 LMYTTHAALPHHLLRNKGTIVNISSVAGRVAVRNSAVYNATKFGVNAFSEGLRQEVTERG 174

Query: 205 IRVNCISPFGVATSM 219
           +RV  I P  V T +
Sbjct: 175 VRVVVIEPGTVDTEL 189

CAD catalyzes the NADP-dependent reduction of clavulanate-9-aldehyde to clavulanic acid, a beta-lactamase inhibitor. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|180771 PRK06947, PRK06947, glucose-1-dehydrogenase; Provisional

 Score = 97.6 bits (243), Expect = 6e-24
 Identities = 89/276 (32%), Positives = 126/276 (45%), Gaps = 43/276 (15%)

Query: 32  KVAIITGGARGIGEAAVRLFARHGAKVVI------ADVEDTLGSVLASTLAPAPVTFVHC 85
           KV +ITG +RGIG A   L A  G  V I      A  E+T  +V A   A      V  
Sbjct: 3   KVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRA---AGGRACVVAG 59

Query: 86  DVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGM 145
           DV+ E D+  + ++  S +GRLD L NNAG++        + D DA     +   NV G 
Sbjct: 60  DVANEADVIAMFDAVQSAFGRLDALVNNAGIVAPSMP---LADMDAARLRRMFDTNVLGA 116

Query: 146 ALGIKHAARVM-INRG--GGCIISTASVAGVMGGLGPHA---YTASKHAIVGLTKNAACE 199
            L  + AAR +  +RG  GG I++ +S+A  +G   P+    Y  SK A+  LT   A E
Sbjct: 117 YLCAREAARRLSTDRGGRGGAIVNVSSIASRLG--SPNEYVDYAGSKGAVDTLTLGLAKE 174

Query: 200 LGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGN 259
           LG +G+RVN + P  + T +       SG           G P +           G   
Sbjct: 175 LGPHGVRVNAVRPGLIETEI-----HASG-----------GQPGRAARL-------GAQT 211

Query: 260 LKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
             G    + ++AE  ++L SD + YV+G  L V GG
Sbjct: 212 PLGRAGEADEVAETIVWLLSDAASYVTGALLDVGGG 247

Length = 248

>gnl|CDD|171820 PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

 Score = 96.9 bits (241), Expect = 9e-24
 Identities = 75/268 (27%), Positives = 125/268 (46%), Gaps = 29/268 (10%)

Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVS 88
           L G+ A++TG + GIGE   RL    GA V +          LA+ L    V     ++S
Sbjct: 4   LSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGER-VKIFPANLS 62

Query: 89  LEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALG 148
             ++++ L     +    +DIL NNAG+     K    +    +++D+V+ VN+      
Sbjct: 63  DRDEVKALGQKAEADLEGVDILVNNAGI----TKDGLFVRMSDEDWDSVLEVNLTATFRL 118

Query: 149 IKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVN 208
            +     M+ R  G II+  SV GV G  G   Y ASK  ++G +K+ A E+    + VN
Sbjct: 119 TRELTHPMMRRRYGRIINITSVVGVTGNPGQANYCASKAGMIGFSKSLAQEIATRNVTVN 178

Query: 209 CISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSK 268
           C++P  + ++M           +++ E +   IP    +++M     G G          
Sbjct: 179 CVAPGFIESAM------TGKLNDKQKEAIMGAIP----MKRM-----GTG---------A 214

Query: 269 DIAEAALYLASDESRYVSGHNLVVDGGV 296
           ++A A  YLAS E+ YV+G  + V+GG+
Sbjct: 215 EVASAVAYLASSEAAYVTGQTIHVNGGM 242

Length = 245

>gnl|CDD|187601 cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, classical (c) SDRs

 Score = 96.4 bits (240), Expect = 1e-23
 Identities = 71/266 (26%), Positives = 114/266 (42%), Gaps = 47/266 (17%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVV--------IADVEDTLGSVLASTLAPAP 79
           R  G+VA++TG + GIG A  R   +HG KVV        I  +     S    TL P  
Sbjct: 3   RWRGRVALVTGASVGIGAAVARALVQHGMKVVGCARRVDKIEALAAECQSAGYPTLFP-- 60

Query: 80  VTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMR 139
                CD+S EE I ++ ++  +++  +D+  NNAG+     + + ++    + +  +  
Sbjct: 61  ---YQCDLSNEEQILSMFSAIRTQHQGVDVCINNAGLA----RPEPLLSGKTEGWKEMFD 113

Query: 140 VNVKGMALGIKHAARVMINRG--GGCIISTASVAG--VMGGLGPHAYTASKHAIVGLTKN 195
           VNV  +++  + A + M  R    G II+  S++G  V      H Y A+KHA+  LT+ 
Sbjct: 114 VNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVPPVSVFHFYAATKHAVTALTEG 173

Query: 196 AACEL--GRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEF 253
              EL   +  IR   ISP  V T       +   +  E+       IP           
Sbjct: 174 LRQELREAKTHIRATSISPGLVETEFAF---KLHDNDPEKAAATYESIP----------- 219

Query: 254 VSGLGNLKGTTLRSKDIAEAALYLAS 279
                      L+ +D+A A LY+ S
Sbjct: 220 ----------CLKPEDVANAVLYVLS 235

Human Mgc4172-like proteins, putative SDRs. These proteins are members of the SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187596 cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 1, classical (c) SDR

 Score = 95.2 bits (237), Expect = 4e-23
 Identities = 77/277 (27%), Positives = 115/277 (41%), Gaps = 34/277 (12%)

Query: 33  VAIITGGARGIGEAAVRLFARHGAKVVIADVEDT--LGSVLASTLAP-APVTFVHCDVSL 89
           VAI+TG +RGIG A     A  G  + I D+ D      V+A  LA      +   D+  
Sbjct: 3   VAIVTGASRGIGRAIATELAARGFDIAINDLPDDDQATEVVAEVLAAGRRAIYFQADIGE 62

Query: 90  EEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGI 149
             D E L++     +GRLD L NNAG+    R    ++D   D FD ++ +N++G     
Sbjct: 63  LSDHEALLDQAWEDFGRLDCLVNNAGI--AVRPRGDLLDLTEDSFDRLIAINLRGPFFLT 120

Query: 150 KHAARVMINRGG------GCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRY 203
           +  AR M+ +          II   S+   +       Y  SK  +   T+  A  L   
Sbjct: 121 QAVARRMVEQPDRFDGPHRSIIFVTSINAYLVSPNRGEYCISKAGLSMATRLLAYRLADE 180

Query: 204 GIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGT 263
           GI V+ I P  + T M           E+ DE +  G+      R+      G       
Sbjct: 181 GIAVHEIRPGLIHTDMTAPV------KEKYDELIAAGLVPI---RRW-----GQP----- 221

Query: 264 TLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTSR 300
               +DIA+A   LAS    Y +G  + +DGG++  R
Sbjct: 222 ----EDIAKAVRTLASGLLPYSTGQPINIDGGLSMRR 254

This subgroup includes Escherichia coli CFT073 FabG. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 255

>gnl|CDD|235633 PRK05872, PRK05872, short chain dehydrogenase; Provisional

 Score = 94.7 bits (236), Expect = 1e-22
 Identities = 56/189 (29%), Positives = 84/189 (44%), Gaps = 14/189 (7%)

Query: 24  PSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVE-DTLGSVLASTLAPAPVTF 82
           P    L GKV ++TG ARGIG    R     GAK+ + D+E   L ++ A       V  
Sbjct: 2   PPMTSLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLT 61

Query: 83  VHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNV 142
           V  DV+    ++      V R+G +D++  NAG+        S+   D D F  V+ VN+
Sbjct: 62  VVADVTDLAAMQAAAEEAVERFGGIDVVVANAGIA----SGGSVAQVDPDAFRRVIDVNL 117

Query: 143 KGMALGIKHAAR----VMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAAC 198
               LG+ H  R     +I R  G ++  +S+A      G  AY ASK  +         
Sbjct: 118 ----LGVFHTVRATLPALIER-RGYVLQVSSLAAFAAAPGMAAYCASKAGVEAFANALRL 172

Query: 199 ELGRYGIRV 207
           E+  +G+ V
Sbjct: 173 EVAHHGVTV 181

Length = 296

>gnl|CDD|180300 PRK05875, PRK05875, short chain dehydrogenase; Provisional

 Score = 94.1 bits (234), Expect = 1e-22
 Identities = 74/271 (27%), Positives = 119/271 (43%), Gaps = 29/271 (10%)

Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADV-EDTLGSVLASTLAPAPVTFVH--- 84
            + +  ++TGG  GIG+         GA V+I     D L +      A      V    
Sbjct: 5   FQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEP 64

Query: 85  CDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKG 144
            DV+ E+ +   +++  + +GRL  + + AG  G++     I   D+D +   + +NV G
Sbjct: 65  ADVTDEDQVARAVDAATAWHGRLHGVVHCAG--GSETI-GPITQIDSDAWRRTVDLNVNG 121

Query: 145 MALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYG 204
               +KHAAR ++  GGG  +  +S+A         AY  +K A+  L K AA ELG   
Sbjct: 122 TMYVLKHAARELVRGGGGSFVGISSIAASNTHRWFGAYGVTKSAVDHLMKLAADELGPSW 181

Query: 205 IRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT 264
           +RVN I P G+  + LV     S +    D      +P   EV                 
Sbjct: 182 VRVNSIRP-GLIRTDLVAPITESPE-LSADYRACTPLPRVGEV----------------- 222

Query: 265 LRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
              +D+A  A++L SD + +++G  + VDGG
Sbjct: 223 ---EDVANLAMFLLSDAASWITGQVINVDGG 250

Length = 276

>gnl|CDD|187612 cd05354, SDR_c7, classical (c) SDR, subgroup 7

 Score = 92.9 bits (231), Expect = 2e-22
 Identities = 61/206 (29%), Positives = 88/206 (42%), Gaps = 12/206 (5%)

Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVS 88
           ++ K  ++TG  RGIG+A V     HGAK V A V D   +          V  +  DV+
Sbjct: 1   IKDKTVLVTGANRGIGKAFVESLLAHGAKKVYAAVRDPGSAAHLVAKYGDKVVPLRLDVT 60

Query: 89  LEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALG 148
             E I+            +D++ NNAGVL      +     +A + +  M VNV G+   
Sbjct: 61  DPESIKAAAAQAKD----VDVVINNAGVLKPATLLEE-GALEALKQE--MDVNVFGLLRL 113

Query: 149 IKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVN 208
            +  A V+   GGG I++  SVA +        Y+ASK A   LT+    EL   G  V 
Sbjct: 114 AQAFAPVLKANGGGAIVNLNSVASLKNFPAMGTYSASKSAAYSLTQGLRAELAAQGTLVL 173

Query: 209 CISPFGVATSMLVNAWRNSGDGEEED 234
            + P  + T M   A      G +E 
Sbjct: 174 SVHPGPIDTRMAAGA-----GGPKES 194

These proteins are members of the classical SDR family, with a canonical active site triad (and also an active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 235

>gnl|CDD|180413 PRK06128, PRK06128, oxidoreductase; Provisional

 Score = 93.4 bits (232), Expect = 5e-22
 Identities = 84/278 (30%), Positives = 117/278 (42%), Gaps = 43/278 (15%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVI-------ADVEDTLGSVLASTLAPAPV 80
           RL+G+ A+ITG   GIG A    FAR GA + +        D  + +  + A        
Sbjct: 52  RLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQA---EGRKA 108

Query: 81  TFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRV 140
             +  D+  E     L+   V   G LDIL N A   G Q   K I D   ++FD   + 
Sbjct: 109 VALPGDLKDEAFCRQLVERAVKELGGLDILVNIA---GKQTAVKDIADITTEQFDATFKT 165

Query: 141 NVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACEL 200
           NV  M    K A   +    G  II+T S+           Y ++K AIV  TK  A ++
Sbjct: 166 NVYAMFWLCKAAIPHL--PPGASIINTGSIQSYQPSPTLLDYASTKAAIVAFTKALAKQV 223

Query: 201 GRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNL 260
              GIRVN ++P  V T +     + SG G+  ++  +FG  S+  ++            
Sbjct: 224 AEKGIRVNAVAPGPVWTPL-----QPSG-GQPPEKIPDFG--SETPMK------------ 263

Query: 261 KGTTLRSKDIAE-AALY--LASDESRYVSGHNLVVDGG 295
                R     E A LY  LAS ES YV+G    V GG
Sbjct: 264 -----RPGQPVEMAPLYVLLASQESSYVTGEVFGVTGG 296

Length = 300

>gnl|CDD|187618 cd05360, SDR_c3, classical (c) SDR, subgroup 3

 Score = 90.9 bits (226), Expect = 1e-21
 Identities = 59/170 (34%), Positives = 78/170 (45%), Gaps = 6/170 (3%)

Query: 33  VAIITGGARGIGEAAVRLFARHGAKVV-IADVEDTLGSVLAS-TLAPAPVTFVHCDVSLE 90
           V +ITG + GIG A    FA  GAKVV  A   + L  +             V  DV+  
Sbjct: 2   VVVITGASSGIGRATALAFAERGAKVVLAARSAEALHELAREVRELGGEAIAVVADVADA 61

Query: 91  EDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIK 150
             +E   ++ V R+GR+D   NNAGV    R      D   +EF  V  VN  G   G  
Sbjct: 62  AQVERAADTAVERFGRIDTWVNNAGVAVFGR----FEDVTPEEFRRVFDVNYLGHVYGTL 117

Query: 151 HAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACEL 200
            A   +  RGGG +I+  S+ G        AY+ASKHA+ G T++   EL
Sbjct: 118 AALPHLRRRGGGALINVGSLLGYRSAPLQAAYSASKHAVRGFTESLRAEL 167

These proteins are members of the classical SDR family, with a canonical active site triad (and also active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 233

>gnl|CDD|168204 PRK05717, PRK05717, oxidoreductase; Validated

 Score = 91.5 bits (227), Expect = 1e-21
 Identities = 77/267 (28%), Positives = 119/267 (44%), Gaps = 28/267 (10%)

Query: 31  GKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLE 90
           G+VA++TG ARGIG          G +VV+AD++   GS +A  L      F+  DV+ E
Sbjct: 10  GRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGEN-AWFIAMDVADE 68

Query: 91  EDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIK 150
             +   +   + ++GRLD L  NA +      + ++       ++ V+ VN+ G  L  K
Sbjct: 69  AQVAAGVAEVLGQFGRLDALVCNAAIA--DPHNTTLESLSLAHWNRVLAVNLTGPMLLAK 126

Query: 151 HAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCI 210
           H A  +     G I++ AS           AY ASK  ++ LT   A  LG   IRVN +
Sbjct: 127 HCAPYL-RAHNGAIVNLASTRARQSEPDTEAYAASKGGLLALTHALAISLGP-EIRVNAV 184

Query: 211 SPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSKDI 270
           SP           W ++ D            PSQ+    + E      +  G     +D+
Sbjct: 185 SP----------GWIDARD------------PSQRRAEPLSEA-DHAQHPAGRVGTVEDV 221

Query: 271 AEAALYLASDESRYVSGHNLVVDGGVT 297
           A    +L S ++ +V+G   VVDGG+T
Sbjct: 222 AAMVAWLLSRQAGFVTGQEFVVDGGMT 248

Length = 255

>gnl|CDD|235935 PRK07109, PRK07109, short chain dehydrogenase; Provisional

 Score = 92.3 bits (230), Expect = 2e-21
 Identities = 62/202 (30%), Positives = 85/202 (42%), Gaps = 16/202 (7%)

Query: 24  PSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVV-IADVEDTLGSVLAS-TLAPAPVT 81
              + +  +V +ITG + G+G A  R FAR GAKVV +A  E+ L ++ A    A     
Sbjct: 1   MMLKPIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEAL 60

Query: 82  FVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSII----DFDADEFDNV 137
            V  DV+  E ++   +      G +D   NNA V        ++     D   +EF  V
Sbjct: 61  AVVADVADAEAVQAAADRAEEELGPIDTWVNNAMV--------TVFGPFEDVTPEEFRRV 112

Query: 138 MRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAA 197
             V   G+  G   A R M  R  G II   S           AY A+KHAI G T +  
Sbjct: 113 TEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRSIPLQSAYCAAKHAIRGFTDSLR 172

Query: 198 CEL--GRYGIRVNCISPFGVAT 217
           CEL      + V  + P  V T
Sbjct: 173 CELLHDGSPVSVTMVQPPAVNT 194

Length = 334

>gnl|CDD|183714 PRK12742, PRK12742, oxidoreductase; Provisional

 Score = 90.6 bits (225), Expect = 2e-21
 Identities = 79/270 (29%), Positives = 116/270 (42%), Gaps = 46/270 (17%)

Query: 31  GKVAIITGGARGIGEAAVRLFARHGAKVVI--ADVEDTLGSVLASTLAPAPVTFVHCDVS 88
           GK  ++ GG+RGIG A VR F   GA V    A  +D    +   T A A    V  D +
Sbjct: 6   GKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETGATA----VQTDSA 61

Query: 89  LEEDIENLINSTVSRYGRLDILYNNAGVL--GNQRKHKSIIDFDADEFDNVMRVNVKGMA 146
              D + +I   V + G LDIL  NAG+   G+        + DAD+ D + ++N+    
Sbjct: 62  ---DRDAVI-DVVRKSGALDILVVNAGIAVFGDAL------ELDADDIDRLFKINIHAPY 111

Query: 147 LGIKHAARVMINRGGGCIISTASVAG-VMGGLGPHAYTASKHAIVGLTKNAACELGRYGI 205
                AAR M    GG II   SV G  M   G  AY ASK A+ G+ +  A + G  GI
Sbjct: 112 HASVEAARQM--PEGGRIIIIGSVNGDRMPVAGMAAYAASKSALQGMARGLARDFGPRGI 169

Query: 206 RVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL 265
            +N + P  + T        N  +G                   M++ +     +K    
Sbjct: 170 TINVVQPGPIDTDA------NPANG------------------PMKDMMHSFMAIK-RHG 204

Query: 266 RSKDIAEAALYLASDESRYVSGHNLVVDGG 295
           R +++A    +LA  E+ +V+G    +DG 
Sbjct: 205 RPEEVAGMVAWLAGPEASFVTGAMHTIDGA 234

Length = 237

>gnl|CDD|181159 PRK07890, PRK07890, short chain dehydrogenase; Provisional

 Score = 90.8 bits (226), Expect = 2e-21
 Identities = 71/278 (25%), Positives = 122/278 (43%), Gaps = 37/278 (13%)

Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIA--------DVEDTLGSVLASTLAPAPV 80
           L+GKV +++G   G+G       AR GA VV+A        +V   +  +    LA    
Sbjct: 3   LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALA---- 58

Query: 81  TFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRV 140
             V  D++ E+   NL+   + R+GR+D L NNA  + +    K + D D   +  V+ +
Sbjct: 59  --VPTDITDEDQCANLVALALERFGRVDALVNNAFRVPSM---KPLADADFAHWRAVIEL 113

Query: 141 NVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACEL 200
           NV G  L +  A    +   GG I+   S+          AY  +K A++  +++ A EL
Sbjct: 114 NVLG-TLRLTQAFTPALAESGGSIVMINSMVLRHSQPKYGAYKMAKGALLAASQSLATEL 172

Query: 201 GRYGIRVNCISP---FGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGL 257
           G  GIRVN ++P   +G          +    G   ++       +  +++++       
Sbjct: 173 GPQGIRVNSVAPGYIWGDPLKGYFR-HQAGKYGVTVEQIYA-ETAANSDLKRLPT----- 225

Query: 258 GNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
                      ++A A L+LASD +R ++G  L V+ G
Sbjct: 226 ---------DDEVASAVLFLASDLARAITGQTLDVNCG 254

Length = 258

>gnl|CDD|187630 cd05372, ENR_SDR, Enoyl acyl carrier protein (ACP) reductase (ENR), divergent SDR

 Score = 89.6 bits (223), Expect = 4e-21
 Identities = 65/281 (23%), Positives = 107/281 (38%), Gaps = 52/281 (18%)

Query: 31  GKVAIITGGA--RGIGEAAVRLFARHGAKVVIADV----EDTLGSVLASTLAPAPVTFVH 84
           GK  +ITG A  R I     +     GA++            +  +       A V  + 
Sbjct: 1   GKRILITGIANDRSIAWGIAKALHEAGAELAFTYQPEALRKRVEKLAERLGESALV--LP 58

Query: 85  CDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKG 144
           CDVS +E+I+ L       +G+LD L ++       +     +D     F   + ++   
Sbjct: 59  CDVSNDEEIKELFAEVKKDWGKLDGLVHSIAFAPKVQLKGPFLDTSRKGFLKALDISAYS 118

Query: 145 MALGIKHAARVMINRGGGCI---ISTASVA----GVMGGLGPHAYTASKHAIVGLTKNAA 197
           +   +  AA  ++N GG  +      +        VMG         +K A+    +  A
Sbjct: 119 LV-SLAKAALPIMNPGGSIVTLSYLGSERVVPGYNVMG--------VAKAALESSVRYLA 169

Query: 198 CELGRYGIRVNCIS--P-FGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFV 254
            ELGR GIRVN IS  P   +A S                     GI    ++ +  E  
Sbjct: 170 YELGRKGIRVNAISAGPIKTLAAS---------------------GITGFDKMLEYSEQR 208

Query: 255 SGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
           + LG      + ++++   A +L SD S  ++G  + VDGG
Sbjct: 209 APLGR----NVTAEEVGNTAAFLLSDLSSGITGEIIYVDGG 245

This bacterial subgroup of ENRs includes Escherichia coli ENR. ENR catalyzes the NAD(P)H-dependent reduction of enoyl-ACP in the last step of fatty acid biosynthesis. De novo fatty acid biosynthesis is catalyzed by the fatty acid synthetase complex, through the serial addition of 2-carbon subunits. In bacteria and plants,ENR catalyzes one of six synthetic steps in this process. Oilseed rape ENR, and also apparently the NADH-specific form of Escherichia coli ENR, is tetrameric. Although similar to the classical SDRs, this group does not have the canonical catalytic tetrad, nor does it have the typical Gly-rich NAD-binding pattern. Such so-called divergent SDRs have a GXXXXXSXA NAD-binding motif and a YXXMXXXK (or YXXXMXXXK) active site motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|183716 PRK12744, PRK12744, short chain dehydrogenase; Provisional

 Score = 89.4 bits (222), Expect = 6e-21
 Identities = 74/281 (26%), Positives = 116/281 (41%), Gaps = 41/281 (14%)

Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVI---------ADVEDTLGSVLASTLAPAP 79
           L+GKV +I GGA+ +G    R  A  GAK V          AD E+T+ +V A   A A 
Sbjct: 6   LKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKA---AGAK 62

Query: 80  VTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAG-VLGNQRKHKSIIDFDADEFDNVM 138
                 D++    +E L +   + +GR DI  N  G VL      K I++    E+D + 
Sbjct: 63  AVAFQADLTTAAAVEKLFDDAKAAFGRPDIAINTVGKVL-----KKPIVEISEAEYDEMF 117

Query: 139 RVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAAC 198
            VN K     IK A R + + G    + T+ +          AY  SK  +   T+ A+ 
Sbjct: 118 AVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGAFTPFYS--AYAGSKAPVEHFTRAASK 175

Query: 199 ELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLG 258
           E G  GI V  + P  + T             +E  E + +            +  + L 
Sbjct: 176 EFGARGISVTAVGPGPMDTPFFY--------PQEGAEAVAY-----------HKTAAALS 216

Query: 259 NLKGTTLRS-KDIAEAALYLASDESRYVSGHNLVVDGGVTT 298
               T L   +DI     +L +D   +++G  ++++GG TT
Sbjct: 217 PFSKTGLTDIEDIVPFIRFLVTD-GWWITGQTILINGGYTT 256

Length = 257

>gnl|CDD|236056 PRK07576, PRK07576, short chain dehydrogenase; Provisional

 Score = 89.2 bits (222), Expect = 7e-21
 Identities = 81/281 (28%), Positives = 111/281 (39%), Gaps = 50/281 (17%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIA--DVEDTLGSVLASTLAPAPVTFVHC 85
              GK  ++ GG  GI     + FAR GA V +A    E    +V     A      V  
Sbjct: 6   DFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSA 65

Query: 86  DVSLEEDIENLINSTVSRYGRLDILYNNAGVLGN---------QRKHKSIIDFDADEFDN 136
           DV     +E         +G +D+L   +G  GN             K+++D D     N
Sbjct: 66  DVRDYAAVEAAFAQIADEFGPIDVLV--SGAAGNFPAPAAGMSANGFKTVVDIDLLGTFN 123

Query: 137 VMRVNVKGMALGIKHAARVMINRGGGCIIS-TASVAGVMGGLGPHAYTASKHAIVGLTKN 195
           V++            AA  ++ R G  II  +A  A V   +  H   A+K  +  LT+ 
Sbjct: 124 VLK------------AAYPLLRRPGASIIQISAPQAFVPMPMQAHV-CAAKAGVDMLTRT 170

Query: 196 AACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEED-ECMNFGIPSQKEVRKMEEFV 254
            A E G  GIRVN I P                 G     E M    PS +    + + V
Sbjct: 171 LALEWGPEGIRVNSIVP-----------------GPIAGTEGMARLAPSPELQAAVAQSV 213

Query: 255 SGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
             L    GT    +DIA AAL+LASD + Y++G  L VDGG
Sbjct: 214 P-LKRN-GTK---QDIANAALFLASDMASYITGVVLPVDGG 249

Length = 264

>gnl|CDD|187631 cd05373, SDR_c10, classical (c) SDR, subgroup 10

 Score = 88.6 bits (220), Expect = 9e-21
 Identities = 55/178 (30%), Positives = 80/178 (44%), Gaps = 7/178 (3%)

Query: 33  VAIITGGARGIGEAAVRLFARHGAKVV-IADVEDTLGSVLASTLAPAP--VTFVHCDVSL 89
           VA + G   G+G A  R FA  G  V   A  E  L ++L   +  A      V  D   
Sbjct: 1   VAAVVGAGDGLGAAIARRFAAEGFSVALAARREAKLEALLVDIIRDAGGSAKAVPTDARD 60

Query: 90  EEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGI 149
           E+++  L +      G L++L  NAG   N      I++     F+ V  +   G  L  
Sbjct: 61  EDEVIALFDLIEEEIGPLEVLVYNAG--ANVWF--PILETTPRVFEKVWEMAAFGGFLAA 116

Query: 150 KHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRV 207
           + AA+ M+ RG G II T + A + G  G  A+  +K A+  L ++ A ELG  GI V
Sbjct: 117 REAAKRMLARGRGTIIFTGATASLRGRAGFAAFAGAKFALRALAQSMARELGPKGIHV 174

This subgroup resembles the classical SDRs, but has an incomplete match to the canonical glycine rich NAD-binding motif and lacks the typical active site tetrad (instead of the critical active site Tyr, it has Phe, but contains the nearby Lys). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 238

>gnl|CDD|182051 PRK09730, PRK09730, putative NAD(P)-binding oxidoreductase; Provisional

 Score = 87.6 bits (217), Expect = 3e-20
 Identities = 73/281 (25%), Positives = 120/281 (42%), Gaps = 53/281 (18%)

Query: 32  KVAIITGGARGIGEAAVRLFARHGAKV-------------VIADVEDTLGSVLASTLAPA 78
            +A++TGG+RGIG A   L A+ G  V             V+  +    G          
Sbjct: 2   AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFV------ 55

Query: 79  PVTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVM 138
               +  D+S E  +  +  +       L  L NNAG+L  Q    ++ +  A+  + V+
Sbjct: 56  ----LQADISDENQVVAMFTAIDQHDEPLAALVNNAGILFTQ---CTVENLTAERINRVL 108

Query: 139 RVNVKGMALGIKHAARVMINR---GGGCIISTASVAGVMGGLGPHA-YTASKHAIVGLTK 194
             NV G  L  + A + M  +    GG I++ +S A  +G  G +  Y ASK AI  LT 
Sbjct: 109 STNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAPGEYVDYAASKGAIDTLTT 168

Query: 195 NAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFV 254
             + E+   GIRVNC+ P  + T M          G E                +++   
Sbjct: 169 GLSLEVAAQGIRVNCVRPGFIYTEM-------HASGGEPG--------------RVDRVK 207

Query: 255 SGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
           S +   +G     +++A+A ++L SD++ YV+G  + + GG
Sbjct: 208 SNIPMQRGGQ--PEEVAQAIVWLLSDKASYVTGSFIDLAGG 246

Length = 247

>gnl|CDD|180818 PRK07062, PRK07062, short chain dehydrogenase; Provisional

 Score = 87.8 bits (218), Expect = 3e-20
 Identities = 81/285 (28%), Positives = 121/285 (42%), Gaps = 46/285 (16%)

Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVI-ADVEDTLGSV---LASTLAPAPVTFVH 84
           LEG+VA++TGG+ GIG A V L    GA V I    E+ L S    L      A +    
Sbjct: 6   LEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAAR 65

Query: 85  CDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKG 144
           CDV  E D+     +  +R+G +D+L NNAG        +  +   AD  D+  R  ++ 
Sbjct: 66  CDVLDEADVAAFAAAVEARFGGVDMLVNNAG--------QGRVSTFADTTDDAWRDELEL 117

Query: 145 MALGIKH---AARVMINRGGGCIISTASVAGVMGGLG----PH--AYTASKHAIVGLTKN 195
               + +   A   ++          AS+  V   L     PH  A +A++  ++ L K+
Sbjct: 118 KYFSVINPTRAFLPLLRASAA-----ASIVCVNSLLALQPEPHMVATSAARAGLLNLVKS 172

Query: 196 AACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVS 255
            A EL   G+RVN I   G+  S     WR   +    D   ++           E + +
Sbjct: 173 LATELAPKGVRVNSIL-LGLVES---GQWRRRYE-ARADPGQSW-----------EAWTA 216

Query: 256 GLGNLKGTTL----RSKDIAEAALYLASDESRYVSGHNLVVDGGV 296
            L   KG  L    R  + A A  +LAS  S Y +G ++ V GG 
Sbjct: 217 ALARKKGIPLGRLGRPDEAARALFFLASPLSSYTTGSHIDVSGGF 261

Length = 265

>gnl|CDD|181044 PRK07577, PRK07577, short chain dehydrogenase; Provisional

 Score = 87.1 bits (216), Expect = 3e-20
 Identities = 69/268 (25%), Positives = 116/268 (43%), Gaps = 38/268 (14%)

Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPA-PVTFVHCDV 87
           +  +  ++TG  +GIG A     A  G +V+           +A +     P     CD+
Sbjct: 1   MSSRTVLVTGATKGIGLALSLRLANLGHQVI----------GIARSAIDDFPGELFACDL 50

Query: 88  SLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMAL 147
           +  E     +      +  +D + NN G+   Q   K  ID  A    +V  +NV+    
Sbjct: 51  ADIEQTAATLAQINEIHP-VDAIVNNVGIALPQPLGK--IDLAA--LQDVYDLNVRAAVQ 105

Query: 148 GIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRV 207
             +     M  R  G I++  S A + G L   +Y+A+K A+VG T+  A EL  YGI V
Sbjct: 106 VTQAFLEGMKLREQGRIVNICSRA-IFGALDRTSYSAAKSALVGCTRTWALELAEYGITV 164

Query: 208 NCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRS 267
           N ++P  + T +     +    G EE++ +   IP ++           LG         
Sbjct: 165 NAVAPGPIETELFR---QTRPVGSEEEKRVLASIPMRR-----------LG-------TP 203

Query: 268 KDIAEAALYLASDESRYVSGHNLVVDGG 295
           +++A A  +L SD++ +++G  L VDGG
Sbjct: 204 EEVAAAIAFLLSDDAGFITGQVLGVDGG 231

Length = 234

>gnl|CDD|187585 cd05324, carb_red_PTCR-like_SDR_c, Porcine testicular carbonyl reductase (PTCR)-like, classical (c) SDRs

 Score = 86.9 bits (216), Expect = 3e-20
 Identities = 62/207 (29%), Positives = 86/207 (41%), Gaps = 16/207 (7%)

Query: 32  KVAIITGGARGIGEAAVRLFARHGAKVVIA---DVEDTLGSVLASTLAPAPVTFVHCDVS 88
           KVA++TG  RGIG   VR  A+ G   VI    DVE    +V         V F   DV+
Sbjct: 1   KVALVTGANRGIGFEIVRQLAKSGPGTVILTARDVERGQAAVEKLRAEGLSVRFHQLDVT 60

Query: 89  LEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALG 148
            +  IE   +    +YG LDIL NNAG+        +      ++    M+ N  G    
Sbjct: 61  DDASIEAAADFVEEKYGGLDILVNNAGIAFKGFDDSTP---TREQARETMKTNFFGTVDV 117

Query: 149 IKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVN 208
            +    ++     G I++ +S  G +      AY  SK A+  LT+  A EL   GI+VN
Sbjct: 118 TQALLPLLKKSPAGRIVNVSSGLGSLTS----AYGVSKAALNALTRILAKELKETGIKVN 173

Query: 209 CISPFGVATSMLVNAWRNSGDGEEEDE 235
              P  V T M        G   +  E
Sbjct: 174 ACCPGWVKTDM------GGGKAPKTPE 194

PTCR is a classical SDR which catalyzes the NADPH-dependent reduction of ketones on steroids and prostaglandins. Unlike most SDRs, PTCR functions as a monomer. This subgroup also includes human carbonyl reductase 1 (CBR1) and CBR3. CBR1 is an NADPH-dependent SDR with broad substrate specificity and may be responsible for the in vivo reduction of quinones, prostaglandins, and other carbonyl-containing compounds. In addition it includes poppy NADPH-dependent salutaridine reductase which catalyzes the stereospecific reduction of salutaridine to 7(S)-salutaridinol in the biosynthesis of morphine, and Arabidopsis SDR1,a menthone reductase, which catalyzes the reduction of menthone to neomenthol, a compound with antimicrobial activity; SDR1 can also carry out neomenthol oxidation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 225

>gnl|CDD|212492 cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs

 Score = 87.7 bits (218), Expect = 3e-20
 Identities = 58/219 (26%), Positives = 88/219 (40%), Gaps = 32/219 (14%)

Query: 31  GKVAIITGGARGIGEAAVRLFARHGAKVVIA--DVEDTLGSV--LASTLAPAPVTFVHCD 86
           GKV +ITG   GIG+   R  A+ GA V+IA  + E    +   +      A V  +  D
Sbjct: 1   GKVVVITGANSGIGKETARELAKRGAHVIIACRNEEKGEEAAAEIKKETGNAKVEVIQLD 60

Query: 87  VSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMA 146
           +S    +       ++R+ RLDIL NNAG++   R+         D F+    VN     
Sbjct: 61  LSSLASVRQFAEEFLARFPRLDILINNAGIMAPPRR------LTKDGFELQFAVNY---- 110

Query: 147 LGIKHAARVMINR----GGGCIISTASVAGVMG-------------GLGPH-AYTASKHA 188
           LG      +++          I++ +S+A   G                P+ AY  SK A
Sbjct: 111 LGHFLLTNLLLPVLKASAPSRIVNVSSIAHRAGPIDFNDLDLENNKEYSPYKAYGQSKLA 170

Query: 189 IVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNS 227
            +  T+  A  L   G+ VN + P  V T +L       
Sbjct: 171 NILFTRELARRLEGTGVTVNALHPGVVRTELLRRNGSFF 209

Classical SDR subgroup containing retinol-DHs, LPORs, and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Pchlide reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14, dehydrogenase/reductase SDR family member (DHRS)-12 , -13 and -X (a DHRS on chromosome X), and WWOX (WW domain-containing oxidoreductase), as well as a Neurospora crassa SDR encoded by the blue light inducible bli-4 gene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 269

>gnl|CDD|187599 cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-like, classical (c) SDRs

 Score = 86.5 bits (214), Expect = 5e-20
 Identities = 56/201 (27%), Positives = 95/201 (47%), Gaps = 8/201 (3%)

Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVI-ADVEDTLGSV---LASTLAPAPVTF-V 83
           L  ++ ++TG + GIG  A   +AR+GA V++    E+ L  V   +       P  F +
Sbjct: 2   LNDRIILVTGASDGIGREAALTYARYGATVILLGRNEEKLRQVADHINEEGGRQPQWFIL 61

Query: 84  HCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVK 143
                  E+ + L       Y RLD + +NAG+LG+      + + +   + +V +VNV 
Sbjct: 62  DLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDV---CPLSEQNPQVWQDVXQVNVN 118

Query: 144 GMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRY 203
              +  +    +++    G ++ T+S  G  G     AY  SK A  GL +  A E  + 
Sbjct: 119 ATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAVSKFATEGLXQVLADEYQQR 178

Query: 204 GIRVNCISPFGVATSMLVNAW 224
            +RVNCI+P G  T+M  +A+
Sbjct: 179 NLRVNCINPGGTRTAMRASAF 199

Escherichia coli K-12 YCIK and related proteins have a canonical classical SDR nucleotide-binding motif and active site tetrad. They are predicted oxoacyl-(acyl carrier protein/ACP) reductases. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 236

>gnl|CDD|235631 PRK05866, PRK05866, short chain dehydrogenase; Provisional

 Score = 87.5 bits (217), Expect = 6e-20
 Identities = 65/203 (32%), Positives = 93/203 (45%), Gaps = 19/203 (9%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVV-IADVEDTLGSVLASTLAPAPVTFVH-C 85
            L GK  ++TG + GIGEAA   FAR GA VV +A  ED L +V               C
Sbjct: 37  DLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPC 96

Query: 86  DVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDAD------EFDNVMR 139
           D+S  + ++ L+     R G +DIL NNAG        +SI    A+      + +  M 
Sbjct: 97  DLSDLDAVDALVADVEKRIGGVDILINNAG--------RSIRRPLAESLDRWHDVERTMV 148

Query: 140 VNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGP--HAYTASKHAIVGLTKNAA 197
           +N       I+  A  M+ RG G II+ A+  GV+    P    Y ASK A+  +++   
Sbjct: 149 LNYYAPLRLIRGLAPGMLERGDGHIINVAT-WGVLSEASPLFSVYNASKAALSAVSRVIE 207

Query: 198 CELGRYGIRVNCISPFGVATSML 220
            E G  G+    +    VAT M+
Sbjct: 208 TEWGDRGVHSTTLYYPLVATPMI 230

Length = 293

>gnl|CDD|187608 cd05350, SDR_c6, classical (c) SDR, subgroup 6

 Score = 86.2 bits (214), Expect = 6e-20
 Identities = 59/195 (30%), Positives = 89/195 (45%), Gaps = 20/195 (10%)

Query: 34  AIITGGARGIGEAAVRLFARHGAKVVI-ADVEDTLGSVLASTLAPAP-VTFVHCDVSLEE 91
            +ITG + GIG A  R FA+ G  V + A   D L  + A  L P P V     DV+ EE
Sbjct: 1   VLITGASSGIGRALAREFAKAGYNVALAARRTDRLDELKAELLNPNPSVEVEILDVTDEE 60

Query: 92  DIENLINSTVSRYGRLDILYNNAGVLGNQR-------KHKSIIDFDADEFDNVMRVNVKG 144
             + +I    +  G LD++  NAGV              +  ID            N+ G
Sbjct: 61  RNQLVIAELEAELGGLDLVIINAGVGKGTSLGDLSFKAFRETID-----------TNLLG 109

Query: 145 MALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYG 204
            A  ++ A      +G G ++  +SVA + G  G  AY+ASK A+  L ++   ++ + G
Sbjct: 110 AAAILEAALPQFRAKGRGHLVLISSVAALRGLPGAAAYSASKAALSSLAESLRYDVKKRG 169

Query: 205 IRVNCISPFGVATSM 219
           IRV  I+P  + T +
Sbjct: 170 IRVTVINPGFIDTPL 184

These proteins are members of the classical SDR family, with a canonical active site tetrad and a fairly well conserved typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|180984 PRK07454, PRK07454, short chain dehydrogenase; Provisional

 Score = 83.9 bits (208), Expect = 4e-19
 Identities = 55/195 (28%), Positives = 88/195 (45%), Gaps = 16/195 (8%)

Query: 32  KVAIITGGARGIGEAAVRLFARHGAKVV-IADVEDTLGSVLASTLAP-APVTFVHCDVSL 89
             A+ITG + GIG+A    FA+ G  +  +A  +D L ++ A   +          D+S 
Sbjct: 7   PRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSN 66

Query: 90  EEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKG---MA 146
            E I   I   + ++G  D+L NNAG+         +++    ++  V+++N+       
Sbjct: 67  PEAIAPGIAELLEQFGCPDVLINNAGMAYT----GPLLEMPLSDWQWVIQLNLTSVFQCC 122

Query: 147 LGIKHAARVMINRGGGCIISTASVAG--VMGGLGPHAYTASKHAIVGLTKNAACELGRYG 204
             +    R    RGGG II+ +S+A        G  AY  SK A+   TK  A E   +G
Sbjct: 123 SAVLPGMR---ARGGGLIINVSSIAARNAFPQWG--AYCVSKAALAAFTKCLAEEERSHG 177

Query: 205 IRVNCISPFGVATSM 219
           IRV  I+   V T +
Sbjct: 178 IRVCTITLGAVNTPL 192

Length = 241

>gnl|CDD|187589 cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid dehydrogenase (3alpha_HSD), classical (c) SDRs

 Score = 83.7 bits (207), Expect = 7e-19
 Identities = 72/294 (24%), Positives = 106/294 (36%), Gaps = 77/294 (26%)

Query: 35  IITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIE 94
           +ITG A GIG A   L    G  V+  D+ +                 V  D+S  E   
Sbjct: 3   VITGAASGIGAATAELLEDAGHTVIGIDLRE---------------ADVIADLSTPEGRA 47

Query: 95  NLINSTVSRY-GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAA 153
             I   ++R  G LD L N AGV G                  V++VN  G+   ++   
Sbjct: 48  AAIADVLARCSGVLDGLVNCAGVGGTT------------VAGLVLKVNYFGLRALMEALL 95

Query: 154 RVMINRGGGCIISTASVAGVMGG-----------------------LGPH----AYTASK 186
             +    G   +  +S+AG                                   AY  SK
Sbjct: 96  PRLRKGHGPAAVVVSSIAGAGWAQDKLELAKALAAGTEARAVALAEHAGQPGYLAYAGSK 155

Query: 187 HAIVGLT-KNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQK 245
            A+   T + AA  L   G+RVN ++P  V T +L    ++   GE  D           
Sbjct: 156 EALTVWTRRRAATWLYGAGVRVNTVAPGPVETPILQAFLQDPRGGESVD----------- 204

Query: 246 EVRKMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTS 299
                  FV+ +G  +       +IA    +LASD + +++G NL VDGG+  S
Sbjct: 205 ------AFVTPMG--RRAE--PDEIAPVIAFLASDAASWINGANLFVDGGLDAS 248

Bacterial 3-alpha_HSD, which catalyzes the NAD-dependent oxidoreduction of hydroxysteroids, is a dimeric member of the classical SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|181349 PRK08278, PRK08278, short chain dehydrogenase; Provisional

 Score = 83.8 bits (208), Expect = 9e-19
 Identities = 63/227 (27%), Positives = 89/227 (39%), Gaps = 42/227 (18%)

Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIA-------------------DVEDTLGS 69
           L GK   ITG +RGIG A     AR GA +VIA                   ++E   G 
Sbjct: 4   LSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQ 63

Query: 70  VLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDF 129
            L           +  DV  E+ +   +   V R+G +DI  NNA  +          D 
Sbjct: 64  ALP----------LVGDVRDEDQVAAAVAKAVERFGGIDICVNNASAI----NLTGTEDT 109

Query: 130 DADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGG--LGPH-AYTASK 186
               FD + ++NV+G  L  +     +       I+ T S    +      PH AYT +K
Sbjct: 110 PMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHIL-TLSPPLNLDPKWFAPHTAYTMAK 168

Query: 187 HAIVGLTKNAACELGRYGIRVNCISP-FGVATSMLVNAWRNSGDGEE 232
           + +   T   A E    GI VN + P   +AT+    A RN   G+E
Sbjct: 169 YGMSLCTLGLAEEFRDDGIAVNALWPRTTIATA----AVRNLLGGDE 211

Length = 273

>gnl|CDD|181417 PRK08416, PRK08416, 7-alpha-hydroxysteroid dehydrogenase; Provisional

 Score = 82.9 bits (205), Expect = 2e-18
 Identities = 77/295 (26%), Positives = 124/295 (42%), Gaps = 68/295 (23%)

Query: 29  LEGKVAIITGGARGIGEAAVRLFARHG-------------AKVVIADVEDTLGSVLASTL 75
           ++GK  +I+GG RGIG+A V  FA+ G             A  +  D+E   G + A   
Sbjct: 6   MKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYG-IKAKAY 64

Query: 76  A---PAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGN----------QRK 122
                 P T+      ++ED +           R+D   +NA + G           + K
Sbjct: 65  PLNILEPETYKELFKKIDEDFD-----------RVDFFISNAIISGRAVVGGYTKFMRLK 113

Query: 123 HKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAY 182
            K +        +N+    V    +G + AA+ M   GGG IIS +S   ++       +
Sbjct: 114 PKGL--------NNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLVYIENYAGH 165

Query: 183 TASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIP 242
             SK A+  + K AA ELG   IRVN +S   + T  L                      
Sbjct: 166 GTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALK------------------AFT 207

Query: 243 SQKEVRKMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
           + +EV+   E +S L  +     + +D+A A L+L S+++ +++G  +VVDGG T
Sbjct: 208 NYEEVKAKTEELSPLNRMG----QPEDLAGACLFLCSEKASWLTGQTIVVDGGTT 258

Length = 260

>gnl|CDD|187586 cd05325, carb_red_sniffer_like_SDR_c, carbonyl reductase sniffer-like, classical (c) SDRs

 Score = 82.3 bits (204), Expect = 2e-18
 Identities = 62/194 (31%), Positives = 91/194 (46%), Gaps = 14/194 (7%)

Query: 34  AIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAP--VTFVHCDVSLEE 91
            +ITG +RGIG   VR     G   VIA   D   +   + L  +   +  +  DV+ E 
Sbjct: 1   VLITGASRGIGLELVRQLLARGNNTVIATCRDPSAATELAALGASHSRLHILELDVTDE- 59

Query: 92  DIENLINSTVSRYG--RLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGI 149
            I     +   R G   LD+L NNAG+L +      +   D+++   V +VNV G  L  
Sbjct: 60  -IAESAEAVAERLGDAGLDVLINNAGILHSYGPASEV---DSEDLLEVFQVNVLGPLLLT 115

Query: 150 KHAARVMINRGGGC-IISTASVAGVMGGLGP---HAYTASKHAIVGLTKNAACELGRYGI 205
           + A   ++ +G    II+ +S  G +G       ++Y ASK A+  LTK+ A EL R GI
Sbjct: 116 Q-AFLPLLLKGARAKIINISSRVGSIGDNTSGGWYSYRASKAALNMLTKSLAVELKRDGI 174

Query: 206 RVNCISPFGVATSM 219
            V  + P  V T M
Sbjct: 175 TVVSLHPGWVRTDM 188

Sniffer is an NADPH-dependent carbonyl reductase of the classical SDR family. Studies in Drosophila melanogaster implicate Sniffer in the prevention of neurodegeneration due to aging and oxidative-stress. This subgroup also includes Rhodococcus sp. AD45 IsoH, which is an NAD-dependent 1-hydroxy-2-glutathionyl-2-methyl-3-butene dehydrogenase involved in isoprene metabolism, Aspergillus nidulans StcE encoded by a gene which is part of a proposed sterigmatocystin biosynthesis gene cluster, Bacillus circulans SANK 72073 BtrF encoded by a gene found in the butirosin biosynthesis gene cluster, and Aspergillus parasiticus nor-1 involved in the biosynthesis of aflatoxins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 233

>gnl|CDD|187625 cd05367, SPR-like_SDR_c, sepiapterin reductase (SPR)-like, classical (c) SDRs

 Score = 82.3 bits (204), Expect = 2e-18
 Identities = 58/201 (28%), Positives = 78/201 (38%), Gaps = 9/201 (4%)

Query: 33  VAIITGGARGIGEAAVR-LFARHGAKVV--IADVEDTLGSVLASTLAPAPVTFVHCDVSL 89
           V I+TG +RGIG A    L  R    VV  +A  E+ L  +         VT V  D+S 
Sbjct: 1   VIILTGASRGIGRALAEELLKRGSPSVVVLLARSEEPLQELKEELRPGLRVTTVKADLSD 60

Query: 90  EEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGI 149
              +E L+ +     G  D+L NNAG LG       I   D DE      +N+       
Sbjct: 61  AAGVEQLLEAIRKLDGERDLLINNAGSLG---PVSKIEFIDLDELQKYFDLNLTSPVCLT 117

Query: 150 KHAARVMINRGG-GCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVN 208
               R    RG    +++ +S A V    G   Y +SK A     +  A E     +RV 
Sbjct: 118 STLLRAFKKRGLKKTVVNVSSGAAVNPFKGWGLYCSSKAARDMFFRVLAAEE--PDVRVL 175

Query: 209 CISPFGVATSMLVNAWRNSGD 229
             +P  V T M       S D
Sbjct: 176 SYAPGVVDTDMQREIRETSAD 196

Human SPR, a member of the SDR family, catalyzes the NADP-dependent reduction of sepiaptern to 7,8-dihydrobiopterin (BH2). In addition to SPRs, this subgroup also contains Bacillus cereus yueD, a benzil reductase, which catalyzes the stereospecific reduction of benzil to (S)-benzoin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 241

>gnl|CDD|187664 cd09763, DHRS1-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) -like, classical (c) SDRs

 Score = 82.1 bits (203), Expect = 4e-18
 Identities = 57/201 (28%), Positives = 86/201 (42%), Gaps = 8/201 (3%)

Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIA--DVEDTLGSVLASTLAPAPVTF-VHC 85
           L GK+A++TG +RGIG          GA V I    +   L        A       V C
Sbjct: 1   LSGKIALVTGASRGIGRGIALQLGEAGATVYITGRTILPQLPGTAEEIEARGGKCIPVRC 60

Query: 86  DVSLEEDIENLINSTVSRY-GRLDILYNNA--GV-LGNQRKHKSIIDFDADEFDNVMRVN 141
           D S ++++E L         GRLDIL NNA   V L      K   +     +D++  V 
Sbjct: 61  DHSDDDEVEALFERVAREQQGRLDILVNNAYAAVQLILVGVAKPFWEEPPTIWDDINNVG 120

Query: 142 VKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELG 201
           ++       +AA +M+  G G I+  +S  G+       AY   K AI  +  + A EL 
Sbjct: 121 LRAHYACSVYAAPLMVKAGKGLIVIISSTGGLEYLFNV-AYGVGKAAIDRMAADMAHELK 179

Query: 202 RYGIRVNCISPFGVATSMLVN 222
            +G+ V  + P  V T +++ 
Sbjct: 180 PHGVAVVSLWPGFVRTELVLE 200

This subgroup includes human DHRS1 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 265

>gnl|CDD|181335 PRK08264, PRK08264, short chain dehydrogenase; Validated

 Score = 81.1 bits (201), Expect = 5e-18
 Identities = 55/191 (28%), Positives = 77/191 (40%), Gaps = 11/191 (5%)

Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVS 88
           ++GKV ++TG  RGIG A V      GA  V A   D      + T     V  +  DV+
Sbjct: 4   IKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDP----ESVTDLGPRVVPLQLDVT 59

Query: 89  LEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALG 148
               +             + IL NNAG+    R    +++ D D     M  N  G    
Sbjct: 60  DPASVAAA----AEAASDVTILVNNAGIF---RTGSLLLEGDEDALRAEMETNYFGPLAM 112

Query: 149 IKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVN 208
            +  A V+   GGG I++  SV   +       Y+ASK A   LT+    EL   G RV 
Sbjct: 113 ARAFAPVLAANGGGAIVNVLSVLSWVNFPNLGTYSASKAAAWSLTQALRAELAPQGTRVL 172

Query: 209 CISPFGVATSM 219
            + P  + T M
Sbjct: 173 GVHPGPIDTDM 183

Length = 238

>gnl|CDD|181188 PRK07985, PRK07985, oxidoreductase; Provisional

 Score = 82.0 bits (202), Expect = 5e-18
 Identities = 79/277 (28%), Positives = 121/277 (43%), Gaps = 41/277 (14%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVI----ADVEDTLGSVLASTLAPAPVTFV 83
           RL+ + A++TGG  GIG AA   +AR GA V I     + ED                 +
Sbjct: 46  RLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLL 105

Query: 84  HCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVK 143
             D+S E+   +L++      G LDI+   A V G Q     I D  +++F     +NV 
Sbjct: 106 PGDLSDEKFARSLVHEAHKALGGLDIM---ALVAGKQVAIPDIADLTSEQFQKTFAINV- 161

Query: 144 GMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHA--YTASKHAIVGLTKNAACELG 201
             AL       + +   G  II+T+S+        PH   Y A+K AI+  ++  A ++ 
Sbjct: 162 -FALFWLTQEAIPLLPKGASIITTSSIQAYQP--SPHLLDYAATKAAILNYSRGLAKQVA 218

Query: 202 RYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLK 261
             GIRVN ++P  + T++ ++       G+ +D+   FG   Q+   K            
Sbjct: 219 EKGIRVNIVAPGPIWTALQISG------GQTQDKIPQFG---QQTPMK------------ 257

Query: 262 GTTLRSKDIAEAA---LYLASDESRYVSGHNLVVDGG 295
               R+   AE A   +YLAS ES YV+     V GG
Sbjct: 258 ----RAGQPAELAPVYVYLASQESSYVTAEVHGVCGG 290

Length = 294

>gnl|CDD|135637 PRK05876, PRK05876, short chain dehydrogenase; Provisional

 Score = 81.2 bits (200), Expect = 7e-18
 Identities = 64/203 (31%), Positives = 107/203 (52%), Gaps = 7/203 (3%)

Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPA--PVTFVHCD 86
             G+ A+ITGGA GIG A    FAR GA+VV+ DV+        + L      V  V CD
Sbjct: 4   FPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCD 63

Query: 87  VSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMA 146
           V   E++ +L +      G +D++++NAG++        I++   D++  V+ V++ G  
Sbjct: 64  VRHREEVTHLADEAFRLLGHVDVVFSNAGIV----VGGPIVEMTHDDWRWVIDVDLWGSI 119

Query: 147 LGIK-HAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGI 205
             ++    R++    GG ++ TAS AG++   G  AY  +K+ +VGL +  A E+   GI
Sbjct: 120 HTVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAKYGVVGLAETLAREVTADGI 179

Query: 206 RVNCISPFGVATSMLVNAWRNSG 228
            V+ + P  V T+++ N+ R  G
Sbjct: 180 GVSVLCPMVVETNLVANSERIRG 202

Length = 275

>gnl|CDD|180744 PRK06914, PRK06914, short chain dehydrogenase; Provisional

 Score = 80.8 bits (200), Expect = 1e-17
 Identities = 52/191 (27%), Positives = 85/191 (44%), Gaps = 17/191 (8%)

Query: 30  EGKVAIITGGARGIGE-AAVRLFARHGAKVVIA----DVEDTLGSVLASTLAPAPVTFVH 84
             K+AI+TG + G G    + L A+ G  V+      + ++ L S          +    
Sbjct: 2   NKKIAIVTGASSGFGLLTTLEL-AKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQ 60

Query: 85  CDVSLEEDIENLINSTVSRYGRLDILYNNAG-VLGNQRKHKSIIDFDADEFDNVMRVNVK 143
            DV+ +  I N     +   GR+D+L NNAG   G       + +   +E+      NV 
Sbjct: 61  LDVTDQNSIHN-FQLVLKEIGRIDLLVNNAGYANGG-----FVEEIPVEEYRKQFETNVF 114

Query: 144 GMALGIKHAARVMINRGGGCIISTASVAGVMG--GLGPHAYTASKHAIVGLTKNAACELG 201
           G     +     M  +  G II+ +S++G +G  GL P  Y +SK+A+ G +++   EL 
Sbjct: 115 GAISVTQAVLPYMRKQKSGKIINISSISGRVGFPGLSP--YVSSKYALEGFSESLRLELK 172

Query: 202 RYGIRVNCISP 212
            +GI V  I P
Sbjct: 173 PFGIDVALIEP 183

Length = 280

>gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional

 Score = 82.7 bits (205), Expect = 1e-17
 Identities = 58/212 (27%), Positives = 86/212 (40%), Gaps = 36/212 (16%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVI-ADVEDTLGSVLASTLAPAPVTFVH-C 85
            L GKV +ITG + GIG A     A  GA V + A   + L  ++A   A       + C
Sbjct: 368 PLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTC 427

Query: 86  DVSLEEDIENLINSTVSRYGRLDILYNNAG-------VLGNQRKHKSIIDFDADEFDNVM 138
           D++    +++ +   ++ +G +D L NNAG            R H         +++  M
Sbjct: 428 DLTDSAAVDHTVKDILAEHGHVDYLVNNAGRSIRRSVENSTDRFH---------DYERTM 478

Query: 139 RVNVKGMALGIKHAARV-------MINRGGGCIISTASVAGVMGGLGPH--AYTASKHAI 189
            VN  G       A R+       M  R  G +++ +S  GV     P   AY ASK A+
Sbjct: 479 AVNYFG-------AVRLILGLLPHMRERRFGHVVNVSS-IGVQTN-APRFSAYVASKAAL 529

Query: 190 VGLTKNAACELGRYGIRVNCISPFGVATSMLV 221
              +  AA E    GI    I    V T M+ 
Sbjct: 530 DAFSDVAASETLSDGITFTTIHMPLVRTPMIA 561

Length = 657

>gnl|CDD|183718 PRK12746, PRK12746, short chain dehydrogenase; Provisional

 Score = 79.7 bits (196), Expect = 2e-17
 Identities = 82/281 (29%), Positives = 128/281 (45%), Gaps = 43/281 (15%)

Query: 27  RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVI------ADVEDTLGSVLASTLAPAPV 80
           + L+GKVA++TG +RGIG A     A  GA V I         ++T+  + ++       
Sbjct: 2   KNLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNG---GKA 58

Query: 81  TFVHCDVS----LEEDIENLINSTVSRYG--RLDILYNNAGVLGNQRKHKSIIDFDADEF 134
             +  D++    +++ +E L N    R G   +DIL NNAG+ G Q    +I +   + F
Sbjct: 59  FLIEADLNSIDGVKKLVEQLKNELQIRVGTSEIDILVNNAGI-GTQ---GTIENTTEEIF 114

Query: 135 DNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTK 194
           D +M VN+K     I+    ++  R  G +I+ +S    +G  G  AY  SK A+  +T 
Sbjct: 115 DEIMAVNIKAPFFLIQQTLPLL--RAEGRVINISSAEVRLGFTGSIAYGLSKGALNTMTL 172

Query: 195 NAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFV 254
             A  LG  GI VN I P    T                   +N  +    E+R      
Sbjct: 173 PLAKHLGERGITVNTIMPGYTKTD------------------INAKLLDDPEIRNFATNS 214

Query: 255 SGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
           S  G +     + +DIA+A  +LAS +SR+V+G  + V GG
Sbjct: 215 SVFGRIG----QVEDIADAVAFLASSDSRWVTGQIIDVSGG 251

Length = 254

>gnl|CDD|187666 cd09806, type1_17beta-HSD-like_SDR_c, human estrogenic 17beta-hydroxysteroid dehydrogenase type 1 (type 1 17beta-HSD)-like, classical (c) SDRs

 Score = 79.4 bits (196), Expect = 3e-17
 Identities = 57/215 (26%), Positives = 90/215 (41%), Gaps = 28/215 (13%)

Query: 32  KVAIITGGARGIG-EAAVRLFARHGAKV--VIA---------DVEDTLGSVLASTLAPAP 79
            V +ITG + GIG   AVRL A   +K   V A          + +  G++   TL    
Sbjct: 1   TVVLITGCSSGIGLHLAVRL-ASDPSKRFKVYATMRDLKKKGRLWEAAGALAGGTLETLQ 59

Query: 80  VTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGV--LGNQRKHKSIIDFDADEFDNV 137
           +     DV   + +   +     R   +D+L  NAGV  LG       +     D   +V
Sbjct: 60  L-----DVCDSKSVAAAVERVTER--HVDVLVCNAGVGLLG------PLEALSEDAMASV 106

Query: 138 MRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAA 197
             VNV G    ++     M  RG G I+ T+SV G+ G      Y ASK A+ GL ++ A
Sbjct: 107 FDVNVFGTVRMLQAFLPDMKRRGSGRILVTSSVGGLQGLPFNDVYCASKFALEGLCESLA 166

Query: 198 CELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEE 232
            +L  + + ++ I    V T+ +     +  +  +
Sbjct: 167 VQLLPFNVHLSLIECGPVHTAFMEKVLGSPEEVLD 201

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical SDR subgroup includes human type 1 17beta-HSD, human retinol dehydrogenase 8, zebrafish photoreceptor associated retinol dehydrogenase type 2, and a chicken ovary-specific 17beta-hydroxysteroid dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|131732 TIGR02685, pter_reduc_Leis, pteridine reductase

 Score = 79.2 bits (195), Expect = 3e-17
 Identities = 75/294 (25%), Positives = 121/294 (41%), Gaps = 56/294 (19%)

Query: 33  VAIITGGARGIGEA-AVRLFARHGAKVVI-----ADVEDTLGSVLASTLAPAPVTFVHCD 86
            A++TG A+ IG + AV L    G +VV+     A    TL + L +    + VT    D
Sbjct: 3   AAVVTGAAKRIGSSIAVALHQE-GYRVVLHYHRSAAAASTLAAELNARRPNSAVT-CQAD 60

Query: 87  VSLEEDI----ENLINSTVSRYGRLDILYNNA----------GVLGNQRKHKSIIDFDAD 132
           +S    +    E +I++    +GR D+L NNA          G  G     K  ++    
Sbjct: 61  LSNSATLFSRCEAIIDACFRAFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVA 120

Query: 133 EFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGG------LGPHAYTASK 186
           E   +   N       IK  A+           +  S+  +         LG   YT +K
Sbjct: 121 E---LFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCDAMTDQPLLGFTMYTMAK 177

Query: 187 HAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKE 246
           HA+ GLT++AA EL    IRVN ++P     S+L +A        E  E     +P  + 
Sbjct: 178 HALEGLTRSAALELAPLQIRVNGVAP---GLSLLPDAM-----PFEVQEDYRRKVPLGQR 229

Query: 247 VRKMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTSR 300
               E+                 IA+  ++L S +++Y++G  + VDGG++ +R
Sbjct: 230 EASAEQ-----------------IADVVIFLVSPKAKYITGTCIKVDGGLSLTR 266

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. Length = 267

>gnl|CDD|235703 PRK06125, PRK06125, short chain dehydrogenase; Provisional

 Score = 78.2 bits (193), Expect = 7e-17
 Identities = 72/273 (26%), Positives = 112/273 (41%), Gaps = 25/273 (9%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLA---PAPVTFVH 84
            L GK  +ITG ++GIG AA   FA  G  + +   +      LA+ L       V    
Sbjct: 4   HLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHA 63

Query: 85  CDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKG 144
            D+S  E  E L     +  G +DIL NNAG +        + D D   +     + V G
Sbjct: 64  LDLSSPEAREQL----AAEAGDIDILVNNAGAI----PGGGLDDVDDAAWRAGWELKVFG 115

Query: 145 MALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYG 204
                + A   M  RG G I++    AG          +A   A++  T+    +    G
Sbjct: 116 YIDLTRLAYPRMKARGSGVIVNVIGAAGENPDADYICGSAGNAALMAFTRALGGKSLDDG 175

Query: 205 IRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT 264
           +RV  ++P  VAT  ++   +     E  DE             + +E ++GL    G  
Sbjct: 176 VRVVGVNPGPVATDRMLTLLKGRARAELGDE------------SRWQELLAGLP--LGRP 221

Query: 265 LRSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
              +++A+   +LAS  S Y SG  + VDGG++
Sbjct: 222 ATPEEVADLVAFLASPRSGYTSGTVVTVDGGIS 254

Length = 259

>gnl|CDD|181077 PRK07677, PRK07677, short chain dehydrogenase; Provisional

 Score = 77.8 bits (192), Expect = 9e-17
 Identities = 83/295 (28%), Positives = 125/295 (42%), Gaps = 81/295 (27%)

Query: 31  GKVAIITGGARGIGEAAVRLFARHGAKVVIA------------DVEDTLGSVLASTLAPA 78
            KV IITGG+ G+G+A  + FA  GA VVI             ++E   G VL       
Sbjct: 1   EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVL------- 53

Query: 79  PVTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGN---------QRKHKSIIDF 129
             T    DV   ED++ ++     ++GR+D L NNA   GN              S+ID 
Sbjct: 54  --TVQM-DVRNPEDVQKMVEQIDEKFGRIDALINNAA--GNFICPAEDLSVNGWNSVIDI 108

Query: 130 DADEFDNVMRV--------NVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHA 181
             +      +          +KG  + +   A    + G G I S A+ AGV+       
Sbjct: 109 VLNGTFYCSQAVGKYWIEKGIKGNIINM--VATYAWDAGPGVIHSAAAKAGVL------- 159

Query: 182 YTASKHAIVGLTKNAACELGR-YGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFG 240
                     +T+  A E GR YGIRVN I+P  +           +G  ++  E     
Sbjct: 160 ---------AMTRTLAVEWGRKYGIRVNAIAPGPI---------ERTGGADKLWE----- 196

Query: 241 IPSQKEVRKMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
             S++  ++  + V  LG L GT    ++IA  A +L SDE+ Y++G  + +DGG
Sbjct: 197 --SEEAAKRTIQSVP-LGRL-GTP---EEIAGLAYFLLSDEAAYINGTCITMDGG 244

Length = 252

>gnl|CDD|180448 PRK06182, PRK06182, short chain dehydrogenase; Validated

 Score = 76.2 bits (188), Expect = 5e-16
 Identities = 59/194 (30%), Positives = 88/194 (45%), Gaps = 24/194 (12%)

Query: 32  KVAIITGGARGIGEAAVRLFARHGAKVVIA--DVEDTLGSVLASTLAPAPVTFVHCDVSL 89
           KVA++TG + GIG+A  R  A  G  V  A   V+          LA   V  +  DV+ 
Sbjct: 4   KVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKM------EDLASLGVHPLSLDVTD 57

Query: 90  EEDIENLINSTVSRYGRLDILYNNAG--VLGNQRKHKSIIDFDADEFDNVMRVNVKGMAL 147
           E  I+  +++ ++  GR+D+L NNAG    G      +I D   DE      VN+ G A 
Sbjct: 58  EASIKAAVDTIIAEEGRIDVLVNNAGYGSYG------AIEDVPIDEARRQFEVNLFGAAR 111

Query: 148 GIKHAARVMINRGGGCIISTASVAG----VMGGLGPHAYTASKHAIVGLTKNAACELGRY 203
             +     M  +  G II+ +S+ G     +G      Y A+K A+ G +     E+  +
Sbjct: 112 LTQLVLPHMRAQRSGRIINISSMGGKIYTPLGAW----YHATKFALEGFSDALRLEVAPF 167

Query: 204 GIRVNCISPFGVAT 217
           GI V  I P G+ T
Sbjct: 168 GIDVVVIEPGGIKT 181

Length = 273

>gnl|CDD|183797 PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 75.6 bits (186), Expect = 5e-16
 Identities = 79/289 (27%), Positives = 115/289 (39%), Gaps = 54/289 (18%)

Query: 26  HRRLEGKVAIITGGAR--GIGEAAVRLFARHGA-----------KVVIADVEDTLGSVLA 72
             +L+ KVA++TG +R  GIG A  +  A  GA           K +   V+      L 
Sbjct: 1   MNQLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQ 60

Query: 73  STLAPAPVTFVHC---DVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDF 129
             L    V  V     D++  +  + L+N    + G   IL NNA        + +  DF
Sbjct: 61  EELLKNGVK-VSSMELDLTQNDAPKELLNKVTEQLGYPHILVNNAA-------YSTNNDF 112

Query: 130 ---DADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASK 186
               A+E D    VNV+   L     AR    + GG II+  S       +G  AY A+K
Sbjct: 113 SNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQGPMVGELAYAATK 172

Query: 187 HAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKE 246
            AI  LT + A E+   GI VN I+P    T      W      EE           ++ 
Sbjct: 173 GAIDALTSSLAAEVAHLGITVNAINPGPTDT-----GWMT----EE----------IKQG 213

Query: 247 VRKMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
           +  M  F        G     KD A    +LAS+E+ +++G  +  +GG
Sbjct: 214 LLPMFPF--------GRIGEPKDAARLIKFLASEEAEWITGQIIHSEGG 254

Length = 256

>gnl|CDD|187628 cd05370, SDR_c2, classical (c) SDR, subgroup 2

 Score = 75.0 bits (185), Expect = 5e-16
 Identities = 64/234 (27%), Positives = 87/234 (37%), Gaps = 24/234 (10%)

Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLG---SVLASTLA--PAPVTFV 83
           L G   +ITGG  GIG A  R F   G  V+I       G     LA      P   T V
Sbjct: 3   LTGNTVLITGGTSGIGLALARKFLEAGNTVIIT------GRREERLAEAKKELPNIHTIV 56

Query: 84  HCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVK 143
             DV   E +E L  + +S Y  LDIL NNAG+           D D    D  +  N+ 
Sbjct: 57  -LDVGDAESVEALAEALLSEYPNLDILINNAGIQRPIDLRDPASDLDK--ADTEIDTNLI 113

Query: 144 GMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRY 203
           G    IK     +  +    I++ +S    +       Y A+K A+   T     +L   
Sbjct: 114 GPIRLIKAFLPHLKKQPEATIVNVSSGLAFVPMAANPVYCATKAALHSYTLALRHQLKDT 173

Query: 204 GIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGL 257
           G+ V  I P  V T +         +    D      +P  + V    E V+GL
Sbjct: 174 GVEVVEIVPPAVDTELH-------EERRNPDGGTPRKMPLDEFVD---EVVAGL 217

Short-chain dehydrogenases/reductases (SDRs, aka Tyrosine-dependent oxidoreductases) are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 228

>gnl|CDD|223696 COG0623, FabI, Enoyl-[acyl-carrier-protein]

 Score = 75.7 bits (187), Expect = 6e-16
 Identities = 65/278 (23%), Positives = 110/278 (39%), Gaps = 43/278 (15%)

Query: 29  LEGKVAIITGGA--RGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFV-HC 85
           LEGK  +I G A  R I     +  A  GA++      + L   +           V  C
Sbjct: 4   LEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGERLEKRVEELAEELGSDLVLPC 63

Query: 86  DVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGM 145
           DV+ +E I+ L  +   ++G+LD L ++      +      +D   + F   M ++    
Sbjct: 64  DVTNDESIDALFATIKKKWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSF 123

Query: 146 ALGIKHAARVMINRGGGCIISTASVAG--------VMGGLGPHAYTASKHAIVGLTKNAA 197
              +  AAR ++N GG  I++   +          VMG         +K A+    +  A
Sbjct: 124 -TALAKAARPLMNNGGS-ILTLTYLGSERVVPNYNVMG--------VAKAALEASVRYLA 173

Query: 198 CELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGL 257
            +LG+ GIRVN IS   + T  L  +                GI   +++ K  E  + L
Sbjct: 174 ADLGKEGIRVNAISAGPIRT--LAAS----------------GIGDFRKMLKENEANAPL 215

Query: 258 GNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
                  +  +++   A +L SD S  ++G  + VD G
Sbjct: 216 RR----NVTIEEVGNTAAFLLSDLSSGITGEIIYVDSG 249

Length = 259

>gnl|CDD|181334 PRK08263, PRK08263, short chain dehydrogenase; Provisional

 Score = 75.5 bits (186), Expect = 8e-16
 Identities = 56/199 (28%), Positives = 86/199 (43%), Gaps = 29/199 (14%)

Query: 31  GKVAIITGGARGIGEAAVRLFARHGAKVV--------IADVEDTLG-SVLASTLAPAPVT 81
            KV  ITG +RG G A        G +VV        +AD+ +  G  +L   L      
Sbjct: 3   EKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLAL------ 56

Query: 82  FVHCDVSLEEDIENLINSTVSRYGRLDILYNNAG--VLGNQRKHKSIIDFDADEFDNVMR 139
               DV+    +   + + V  +GRLDI+ NNAG  + G       I +    E    + 
Sbjct: 57  ----DVTDRAAVFAAVETAVEHFGRLDIVVNNAGYGLFG------MIEEVTESEARAQID 106

Query: 140 VNVKGMALGIKHAAR-VMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAAC 198
            N  G AL +  A    +  +  G II  +S+ G+        Y ASK A+ G+++  A 
Sbjct: 107 TNFFG-ALWVTQAVLPYLREQRSGHIIQISSIGGISAFPMSGIYHASKWALEGMSEALAQ 165

Query: 199 ELGRYGIRVNCISPFGVAT 217
           E+  +GI+V  + P G +T
Sbjct: 166 EVAEFGIKVTLVEPGGYST 184

Length = 275

>gnl|CDD|130890 TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-protein) reductase, putative

 Score = 74.9 bits (184), Expect = 9e-16
 Identities = 70/269 (26%), Positives = 120/269 (44%), Gaps = 39/269 (14%)

Query: 35  IITGGARGIGEAAVRLFARHGAKVVI------ADVEDTLGSVLASTLAPAPVTFVHCDVS 88
           ++TG +RGIG A     A  G ++ +      +D E  + ++ A       + F   DV+
Sbjct: 2   LVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQF---DVA 58

Query: 89  LEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALG 148
                  L+ + ++ +G    +  NAG+     +  +      +++D V+  N+ G    
Sbjct: 59  DRVACRTLLEADIAEHGAYYGVVLNAGI----TRDAAFPALSEEDWDIVIHTNLDGFYNV 114

Query: 149 IKHAARVMIN-RGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRV 207
           I      MI  R GG II+ ASV+GVMG  G   Y+A+K  ++G TK  A EL +  I V
Sbjct: 115 IHPCTMPMIRARQGGRIITLASVSGVMGNRGQVNYSAAKAGLIGATKALAVELAKRKITV 174

Query: 208 NCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRS 267
           NCI+P  + T ML           E +  ++  +     + +M +               
Sbjct: 175 NCIAPGLIDTEML----------AEVEHDLDEAL-KTVPMNRMGQ--------------P 209

Query: 268 KDIAEAALYLASDESRYVSGHNLVVDGGV 296
            ++A  A +L SD + YV+   + V+GG+
Sbjct: 210 AEVASLAGFLMSDGASYVTRQVISVNGGM 238

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|168186 PRK05693, PRK05693, short chain dehydrogenase; Provisional

 Score = 75.2 bits (185), Expect = 1e-15
 Identities = 58/201 (28%), Positives = 88/201 (43%), Gaps = 23/201 (11%)

Query: 32  KVAIITGGARGIGEAAVRLFARHGAKVV-----IADVEDTLGSVLASTLAPAPVTFVHCD 86
            V +ITG + GIG A    F   G +V        DVE          LA A  T V  D
Sbjct: 2   PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVE---------ALAAAGFTAVQLD 52

Query: 87  VSLEEDIENLINSTVSRYGRLDILYNNAG--VLGNQRKHKSIIDFDADEFDNVMRVNVKG 144
           V+    +  L     + +G LD+L NNAG   +G       ++D   +        NV  
Sbjct: 53  VNDGAALARLAEELEAEHGGLDVLINNAGYGAMG------PLLDGGVEAMRRQFETNVFA 106

Query: 145 MALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYG 204
           + +G+  A   ++ R  G +++  SV+GV+      AY ASK A+  L+     EL  +G
Sbjct: 107 V-VGVTRALFPLLRRSRGLVVNIGSVSGVLVTPFAGAYCASKAAVHALSDALRLELAPFG 165

Query: 205 IRVNCISPFGVATSMLVNAWR 225
           ++V  + P  +A+    NA R
Sbjct: 166 VQVMEVQPGAIASQFASNASR 186

Length = 274

>gnl|CDD|237099 PRK12428, PRK12428, 3-alpha-hydroxysteroid dehydrogenase; Provisional

 Score = 74.3 bits (183), Expect = 1e-15
 Identities = 71/291 (24%), Positives = 107/291 (36%), Gaps = 84/291 (28%)

Query: 47  AVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGR 106
             RL    GA+V+  D  +        TL      F+  D+     I+  + +     GR
Sbjct: 1   TARLLRFLGARVIGVDRREP-----GMTLD----GFIQADLGDPASIDAAVAALP---GR 48

Query: 107 LDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINR--GGGCI 164
           +D L+N AGV G                + V RVN     LG++H    ++ R   GG I
Sbjct: 49  IDALFNIAGVPGTA------------PVELVARVNF----LGLRHLTEALLPRMAPGGAI 92

Query: 165 ISTASVAG--------VMGGLG-------------------PHAYTASKHA-IVGLTKNA 196
           ++ AS+AG        +   L                       Y  SK A I+   + A
Sbjct: 93  VNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALATGYQLSKEALILWTMRQA 152

Query: 197 ACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKM--EEFV 254
               G  GIRVNC++P  V T +L                         + R M  +E V
Sbjct: 153 QPWFGARGIRVNCVAPGPVFTPIL------------------------GDFRSMLGQERV 188

Query: 255 SGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTSRNCVGL 305
                  G    + + A   ++L SD +R+++G NL VDGG+  +     L
Sbjct: 189 DSDAKRMGRPATADEQAAVLVFLCSDAARWINGVNLPVDGGLAATYIAAVL 239

Length = 241

>gnl|CDD|237189 PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 73.6 bits (181), Expect = 3e-15
 Identities = 58/205 (28%), Positives = 84/205 (40%), Gaps = 31/205 (15%)

Query: 29  LEGKVAIITGGAR--GIGEAAVRLFARHGAKVVI-----------ADVEDTLGSVLASTL 75
           L  K+A++TG +R  GIG A  R  A  G  +               + D    +L   +
Sbjct: 3   LMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEI 62

Query: 76  APAPVTFVHCDVSLEED--IENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADE 133
               V   H ++ L +      +  +   R G   IL NNA    + R    + +  A++
Sbjct: 63  ESYGVRCEHMEIDLSQPYAPNRVFYAVSERLGDPSILINNAAYSTHTR----LEELTAEQ 118

Query: 134 FDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGG--LGPH----AYTASKH 187
            D    VNV+   L     A+    + GG II+  S      G  LGP     AY A+K 
Sbjct: 119 LDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTS------GQSLGPMPDELAYAATKG 172

Query: 188 AIVGLTKNAACELGRYGIRVNCISP 212
           AI   TK+ A EL   GI VN ++P
Sbjct: 173 AIEAFTKSLAPELAEKGITVNAVNP 197

Length = 256

>gnl|CDD|181139 PRK07832, PRK07832, short chain dehydrogenase; Provisional

 Score = 73.9 bits (182), Expect = 3e-15
 Identities = 53/201 (26%), Positives = 90/201 (44%), Gaps = 24/201 (11%)

Query: 32  KVAIITGGARGIGEAAVRLFARHGAKVVIADV-EDTLGSVLASTLAPAPVTFVH--CDVS 88
           K   +TG A GIG A     A  GA++ + D   D L   +A   A       H   D+S
Sbjct: 1   KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDIS 60

Query: 89  LEEDIENLINSTVSRYGRLDILYNNAGVLG-------NQRKHKSIIDFDADEFDNVMRVN 141
             + +        + +G +D++ N AG+            + + ++D           VN
Sbjct: 61  DYDAVAAFAADIHAAHGSMDVVMNIAGISAWGTVDRLTHEQWRRMVD-----------VN 109

Query: 142 VKGMALGIKHAARVMINRG-GGCIISTASVAGVMGGLGPH-AYTASKHAIVGLTKNAACE 199
           + G    I+     M+  G GG +++ +S AG++  L  H AY+ASK  + GL++    +
Sbjct: 110 LMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLV-ALPWHAAYSASKFGLRGLSEVLRFD 168

Query: 200 LGRYGIRVNCISPFGVATSML 220
           L R+GI V+ + P  V T ++
Sbjct: 169 LARHGIGVSVVVPGAVKTPLV 189

Length = 272

>gnl|CDD|187614 cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxysteroid dehydrogenases (17beta-HSDs) types -1, -3, and -12, -like, classical (c) SDRs

 Score = 73.0 bits (180), Expect = 4e-15
 Identities = 53/195 (27%), Positives = 86/195 (44%), Gaps = 12/195 (6%)

Query: 31  GKVAIITGGARGIGEAAVRLFARHGAKVV-IADVEDTLGSVLASTLAPAPV---TFVHCD 86
           G  A++TG   GIG+A     A+ G  V+ I+  ++ L +V         V   T    D
Sbjct: 1   GTWAVVTGATDGIGKAYAEELAKRGFNVILISRTQEKLDAVAKEIEEKYGVETKTIAA-D 59

Query: 87  VSLEEDIENLINSTVSRYGRLDI--LYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKG 144
            S  +DI   I   +     LDI  L NN G+  +  ++   ++   DE  +++ VNV  
Sbjct: 60  FSAGDDIYERIEKELE---GLDIGILVNNVGISHSIPEYF--LETPEDELQDIINVNVMA 114

Query: 145 MALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYG 204
                +     M+ R  G I++ +S AG++       Y+ASK  +   ++    E    G
Sbjct: 115 TLKMTRLILPGMVKRKKGAIVNISSFAGLIPTPLLATYSASKAFLDFFSRALYEEYKSQG 174

Query: 205 IRVNCISPFGVATSM 219
           I V  + P+ VAT M
Sbjct: 175 IDVQSLLPYLVATKM 189

This subgroup includes various 17-beta-hydroxysteroid dehydrogenases and 3-ketoacyl-CoA reductase, these are members of the SDR family, and contain the canonical active site tetrad and glycine-rich NAD-binding motif of the classical SDRs. 3-ketoacyl-CoA reductase (KAR, aka 17beta-HSD type 12, encoded by HSD17B12) acts in fatty acid elongation; 17beta- hydroxysteroid dehydrogenases are isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. 17beta-estradiol dehydrogenase (aka 17beta-HSD type 1, encoded by HSD17B1) converts estrone to estradiol. Estradiol is the predominant female sex hormone. 17beta-HSD type 3 (aka testosterone 17-beta-dehydrogenase 3, encoded by HSD17B3) catalyses the reduction of androstenedione to testosterone, it also accepts estrogens as substrates. This subgroup also contains a putative steroid dehydrogenase let-767 from Caenorhabditis elegans, mutation in which results in hypersensitivity to cholesterol limitation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|235910 PRK07024, PRK07024, short chain dehydrogenase; Provisional

 Score = 72.7 bits (179), Expect = 7e-15
 Identities = 59/187 (31%), Positives = 89/187 (47%), Gaps = 8/187 (4%)

Query: 36  ITGGARGIGEAAVRLFARHGAKV-VIADVEDTLGSVLASTLAPAPVTFVHC-DVSLEEDI 93
           ITG + GIG+A  R +AR GA + ++A   D L +  A+ L  A    V+  DV   + +
Sbjct: 7   ITGASSGIGQALAREYARQGATLGLVARRTDALQA-FAARLPKAARVSVYAADVRDADAL 65

Query: 94  ENLINSTVSRYGRLDILYNNAGV-LGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHA 152
                  ++ +G  D++  NAG+ +G   + +     D   F  VM  N  GM    +  
Sbjct: 66  AAAAADFIAAHGLPDVVIANAGISVGTLTEERE----DLAVFREVMDTNYFGMVATFQPF 121

Query: 153 ARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISP 212
              M     G ++  ASVAGV G  G  AY+ASK A +   ++   EL   G+RV  I+P
Sbjct: 122 IAPMRAARRGTLVGIASVAGVRGLPGAGAYSASKAAAIKYLESLRVELRPAGVRVVTIAP 181

Query: 213 FGVATSM 219
             + T M
Sbjct: 182 GYIRTPM 188

Length = 257

>gnl|CDD|183719 PRK12747, PRK12747, short chain dehydrogenase; Provisional

 Score = 71.3 bits (174), Expect = 2e-14
 Identities = 79/279 (28%), Positives = 124/279 (44%), Gaps = 43/279 (15%)

Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVI------ADVEDTLGSVLASTLAPAPVTF 82
           L+GKVA++TG +RGIG A  +  A  GA V I       + E+T+  + ++         
Sbjct: 2   LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNG---GSAFS 58

Query: 83  VHCDVSLEEDIENLINS----TVSRYG--RLDILYNNAGVLGNQRKHKSIIDFDADEFDN 136
           +  ++     +E L +S      +R G  + DIL NNAG+       ++   F    FD 
Sbjct: 59  IGANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQF----FDR 114

Query: 137 VMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNA 196
           ++ VN K     I+ A   +  R    II+ +S A  +      AY+ +K AI  +T   
Sbjct: 115 MVSVNAKAPFFIIQQALSRL--RDNSRIINISSAATRISLPDFIAYSMTKGAINTMTFTL 172

Query: 197 ACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSG 256
           A +LG  GI VN I P  + T                   MN  + S   +++    +S 
Sbjct: 173 AKQLGARGITVNAILPGFIKTD------------------MNAELLSDPMMKQYATTISA 214

Query: 257 LGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
              L       +DIA+ A +LAS +SR+V+G  + V GG
Sbjct: 215 FNRLG----EVEDIADTAAFLASPDSRWVTGQLIDVSGG 249

Length = 252

>gnl|CDD|235713 PRK06139, PRK06139, short chain dehydrogenase; Provisional

 Score = 72.1 bits (177), Expect = 2e-14
 Identities = 60/195 (30%), Positives = 91/195 (46%), Gaps = 7/195 (3%)

Query: 26  HRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADV-EDTLGSVLASTLA-PAPVTFV 83
              L G V +ITG + GIG+A    FAR GA++V+A   E+ L +V     A  A V  V
Sbjct: 2   MGPLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVV 61

Query: 84  HCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVK 143
             DV+  + ++ L     S  GR+D+  NN GV    R  ++ I  +A E   V++ N+ 
Sbjct: 62  PTDVTDADQVKALATQAASFGGRIDVWVNNVGVGAVGRFEETPI--EAHE--QVIQTNLI 117

Query: 144 GMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRY 203
           G       A  +   +G G  I+  S+ G        AY+ASK  + G ++    EL  +
Sbjct: 118 GYMRDAHAALPIFKKQGHGIFINMISLGGFAAQPYAAAYSASKFGLRGFSEALRGELADH 177

Query: 204 -GIRVNCISPFGVAT 217
             I V  + P  + T
Sbjct: 178 PDIHVCDVYPAFMDT 192

Length = 330

>gnl|CDD|236389 PRK09134, PRK09134, short chain dehydrogenase; Provisional

 Score = 69.2 bits (170), Expect = 1e-13
 Identities = 71/284 (25%), Positives = 114/284 (40%), Gaps = 50/284 (17%)

Query: 21  DAPPSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVI------ADVEDTLGSVLAST 74
             P S      + A++TG AR IG A     A HG  V +       + E     + A  
Sbjct: 1   SPPMSMAAP--RAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALG 58

Query: 75  LAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEF 134
                   +  D++ E ++  L+    +  G + +L NNA +     ++ S   F    +
Sbjct: 59  RRAVA---LQADLADEAEVRALVARASAALGPITLLVNNASLF----EYDSAASFTRASW 111

Query: 135 DNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPH--AYTASKHAIVGL 192
           D  M  N++   +  +  AR +     G +++   +   +  L P   +YT SK A+   
Sbjct: 112 DRHMATNLRAPFVLAQAFARALPADARGLVVNM--IDQRVWNLNPDFLSYTLSKAALWTA 169

Query: 193 TKNAACELG-RYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKME 251
           T+  A  L  R  IRVN I P G     L      SG    ED    F     ++     
Sbjct: 170 TRTLAQALAPR--IRVNAIGP-GPT---LP-----SGRQSPED----F----ARQHA--- 207

Query: 252 EFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
              + LG  +G+T   ++IA A  YL   ++  V+G  + VDGG
Sbjct: 208 --ATPLG--RGSTP--EEIAAAVRYLL--DAPSVTGQMIAVDGG 243

Length = 258

>gnl|CDD|180766 PRK06940, PRK06940, short chain dehydrogenase; Provisional

 Score = 68.9 bits (169), Expect = 2e-13
 Identities = 76/300 (25%), Positives = 117/300 (39%), Gaps = 68/300 (22%)

Query: 32  KVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPA--PVTFVHCDVSL 89
           +V ++ G A GIG+A  R     G KV++AD  +      A TL  A   V+    DVS 
Sbjct: 3   EVVVVIG-AGGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSS 60

Query: 90  EEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGI 149
            E ++ L   T    G +  L + AGV  +Q   ++I+           +V++ G AL +
Sbjct: 61  RESVKALAA-TAQTLGPVTGLVHTAGVSPSQASPEAIL-----------KVDLYGTALVL 108

Query: 150 KHAARVMINRGGGCIISTASVAG-VMGGLGP----------------------------- 179
           +   +V+   G G +I  AS +G  +  L                               
Sbjct: 109 EEFGKVIAPGGAGVVI--ASQSGHRLPALTAEQERALATTPTEELLSLPFLQPDAIEDSL 166

Query: 180 HAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNF 239
           HAY  +K A        A + G  G R+N ISP  ++T +           ++E      
Sbjct: 167 HAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPL----------AQDE-----L 211

Query: 240 GIPSQKEVRKMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTS 299
             P     R M    S  G   GT     +IA  A +L      +++G + +VDGG T S
Sbjct: 212 NGPRGDGYRNMFA-KSPAGRP-GT---PDEIAALAEFLMGPRGSFITGSDFLVDGGATAS 266

Length = 275

>gnl|CDD|236372 PRK09072, PRK09072, short chain dehydrogenase; Provisional

 Score = 68.4 bits (168), Expect = 2e-13
 Identities = 47/194 (24%), Positives = 93/194 (47%), Gaps = 8/194 (4%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVI-ADVEDTLGSVLASTLAPAPVTFVHCD 86
            L+ K  ++TG + GIG+A     A  GA++++     + L ++ A    P    +V  D
Sbjct: 2   DLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVAD 61

Query: 87  VSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSII-DFDADEFDNVMRVNVKGM 145
           ++ E   E ++ +     G +++L NNAGV      H +++ D D +  + ++ +N+   
Sbjct: 62  LTSEAGREAVL-ARAREMGGINVLINNAGV-----NHFALLEDQDPEAIERLLALNLTAP 115

Query: 146 ALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGI 205
               +    ++  +    +++  S  G +G  G  +Y ASK A+ G ++    EL   G+
Sbjct: 116 MQLTRALLPLLRAQPSAMVVNVGSTFGSIGYPGYASYCASKFALRGFSEALRRELADTGV 175

Query: 206 RVNCISPFGVATSM 219
           RV  ++P    T+M
Sbjct: 176 RVLYLAPRATRTAM 189

Length = 263

>gnl|CDD|187656 cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup 2, complex (x) SDRs

 Score = 69.3 bits (170), Expect = 3e-13
 Identities = 54/207 (26%), Positives = 88/207 (42%), Gaps = 27/207 (13%)

Query: 30  EGKVAIITGGARGIGEAAVRLFARH-GAKVVI-------ADVEDTLGSVLASTLAPAPVT 81
            G V ++TGGA GIG A  R  AR  GA++V+        + E    ++ A     A V 
Sbjct: 204 PGGVYLVTGGAGGIGRALARALARRYGARLVLLGRSPLPPEEEWKAQTLAALEALGARVL 263

Query: 82  FVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVN 141
           ++  DV+    +  L+     RYG +D + + AGVL    +   +    A++F+ V+   
Sbjct: 264 YISADVTDAAAVRRLLEKVRERYGAIDGVIHAAGVL----RDALLAQKTAEDFEAVLAPK 319

Query: 142 VKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELG 201
           V G+     + A+ + +      +  +SV+   GG G   Y A+         NA   L 
Sbjct: 320 VDGLL----NLAQALADEPLDFFVLFSSVSAFFGGAGQADYAAA---------NAF--LD 364

Query: 202 RYGIRVNCISPFGVATSMLVNAWRNSG 228
            +   +    P G   S+   AWR  G
Sbjct: 365 AFAAYLRQRGPQGRVLSINWPAWREGG 391

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. This subfamily includes both KR domains of the Bacillus subtilis Pks J,-L, and PksM, and all three KR domains of PksN, components of the megacomplex bacillaene synthase, which synthesizes the antibiotic bacillaene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 436

>gnl|CDD|180669 PRK06720, PRK06720, hypothetical protein; Provisional

 Score = 65.8 bits (160), Expect = 5e-13
 Identities = 45/158 (28%), Positives = 78/158 (49%), Gaps = 8/158 (5%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAP--APVTFVHC 85
           +L GKVAI+TGG  GIG     L A+ GAKV++ D++   G      +        FV  
Sbjct: 13  KLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSY 72

Query: 86  DVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGM 145
           D+  + D + +I+ T++ + R+D+L+ NAG+     K  SI     +   NV+ +N   +
Sbjct: 73  DMEKQGDWQRVISITLNAFSRIDMLFQNAGLY----KIDSIFSRQQENDSNVLCIN--DV 126

Query: 146 ALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYT 183
            + IK      + +    ++S   + G++G  G   +T
Sbjct: 127 WIEIKQLTSSFMKQQEEVVLSDLPIFGIIGTKGQSFHT 164

Length = 169

>gnl|CDD|180446 PRK06180, PRK06180, short chain dehydrogenase; Provisional

 Score = 66.1 bits (162), Expect = 2e-12
 Identities = 50/193 (25%), Positives = 79/193 (40%), Gaps = 25/193 (12%)

Query: 30  EGKVAIITGGARGIGEAAVRLFARHGAKVVI-----ADVEDTLGSVLASTLAPAPVTFVH 84
             K  +ITG + G G A  +     G +VV      A   D         L P       
Sbjct: 3   SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADF------EALHPDRALARL 56

Query: 85  CDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADE-----FDNVMR 139
            DV+  + I+ ++    + +G +D+L NNAG       H+  I+          F+    
Sbjct: 57  LDVTDFDAIDAVVADAEATFGPIDVLVNNAGY-----GHEGAIEESPLAEMRRQFE---- 107

Query: 140 VNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACE 199
           VNV G     K     M  R  G I++  S+ G++   G   Y  SK A+ G++++ A E
Sbjct: 108 VNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLITMPGIGYYCGSKFALEGISESLAKE 167

Query: 200 LGRYGIRVNCISP 212
           +  +GI V  + P
Sbjct: 168 VAPFGIHVTAVEP 180

Length = 277

>gnl|CDD|181762 PRK09291, PRK09291, short chain dehydrogenase; Provisional

 Score = 63.9 bits (156), Expect = 9e-12
 Identities = 56/187 (29%), Positives = 85/187 (45%), Gaps = 18/187 (9%)

Query: 31  GKVAIITGGARGIG-EAAVRLFARHGAKVVIADVEDTLGSVLASTLAPA----PVTFVHC 85
            K  +ITG   G G E A+RL AR G  V IA V+     V A     A     +     
Sbjct: 2   SKTILITGAGSGFGREVALRL-ARKGHNV-IAGVQ-IAPQVTALRAEAARRGLALRVEKL 58

Query: 86  DVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGM 145
           D++   D        V      D+L NNAG+     +  +++D   +    +   NV G 
Sbjct: 59  DLTDAIDRAQAAEWDV------DVLLNNAGIG----EAGAVVDIPVELVRELFETNVFGP 108

Query: 146 ALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGI 205
               +   R M+ RG G ++ T+S+AG++ G    AY ASKHA+  + +    EL  +GI
Sbjct: 109 LELTQGFVRKMVARGKGKVVFTSSMAGLITGPFTGAYCASKHALEAIAEAMHAELKPFGI 168

Query: 206 RVNCISP 212
           +V  ++P
Sbjct: 169 QVATVNP 175

Length = 257

>gnl|CDD|171822 PRK12938, PRK12938, acetyacetyl-CoA reductase; Provisional

 Score = 61.6 bits (149), Expect = 4e-11
 Identities = 67/277 (24%), Positives = 115/277 (41%), Gaps = 49/277 (17%)

Query: 32  KVAIITGGARGIGEAAVRLFARHGAKVVIA------------DVEDTLGSVLASTLAPAP 79
           ++A +TGG  GIG +  +   + G KVV              + +  LG    ++     
Sbjct: 4   RIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIAS----- 58

Query: 80  VTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMR 139
                 +V   +  +   +   +  G +D+L NNAG+  +    K       +++  V+ 
Sbjct: 59  ----EGNVGDWDSTKAAFDKVKAEVGEIDVLVNNAGITRDVVFRK----MTREDWTAVID 110

Query: 140 VNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACE 199
            N+  +    K     M+ RG G II+ +SV G  G  G   Y+ +K  I G T + A E
Sbjct: 111 TNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAGIHGFTMSLAQE 170

Query: 200 LGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGN 259
           +   G+ VN +SP  + T M V A R      +  E +   IP    VR++         
Sbjct: 171 VATKGVTVNTVSPGYIGTDM-VKAIR-----PDVLEKIVATIP----VRRLGS------- 213

Query: 260 LKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGV 296
                    +I     +LAS+ES + +G +  ++GG+
Sbjct: 214 -------PDEIGSIVAWLASEESGFSTGADFSLNGGL 243

Length = 246

>gnl|CDD|169389 PRK08339, PRK08339, short chain dehydrogenase; Provisional

 Score = 61.8 bits (150), Expect = 5e-11
 Identities = 63/270 (23%), Positives = 117/270 (43%), Gaps = 21/270 (7%)

Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVI-ADVEDTLGSVLASTLAPAP--VTFVHC 85
           L GK+A  T  ++GIG    R+ AR GA V++ +  E+ L        + +   V+++  
Sbjct: 6   LSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVA 65

Query: 86  DVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGM 145
           D++  ED+E  +   +   G  DI + + G      K    ++   ++++  +++ +   
Sbjct: 66  DLTKREDLERTVKE-LKNIGEPDIFFFSTG----GPKPGYFMEMSMEDWEGAVKLLLYPA 120

Query: 146 ALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGI 205
               +     M  +G G II + SVA              + ++ GL +  A ELG  GI
Sbjct: 121 VYLTRALVPAMERKGFGRIIYSTSVAIKEPIPNIALSNVVRISMAGLVRTLAKELGPKGI 180

Query: 206 RVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL 265
            VN I P  + T  ++           +D     G   ++ +++  + +  LG L     
Sbjct: 181 TVNGIMPGIIRTDRVIQL--------AQDRAKREGKSVEEALQEYAKPIP-LGRLG---- 227

Query: 266 RSKDIAEAALYLASDESRYVSGHNLVVDGG 295
             ++I     +LASD   Y++G  + VDGG
Sbjct: 228 EPEEIGYLVAFLASDLGSYINGAMIPVDGG 257

Length = 263

>gnl|CDD|182531 PRK10538, PRK10538, malonic semialdehyde reductase; Provisional

 Score = 61.3 bits (149), Expect = 6e-11
 Identities = 52/201 (25%), Positives = 86/201 (42%), Gaps = 7/201 (3%)

Query: 33  VAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEED 92
           + ++TG   G GE   R F + G KV+           L   L    +     DV     
Sbjct: 2   IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDN-LYIAQLDVRNRAA 60

Query: 93  IENLINSTVSRYGRLDILYNNAGV-LGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKH 151
           IE ++ S  + +  +D+L NNAG+ LG +  HK+      ++++ ++  N KG+    + 
Sbjct: 61  IEEMLASLPAEWRNIDVLVNNAGLALGLEPAHKA----SVEDWETMIDTNNKGLVYMTRA 116

Query: 152 AARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCIS 211
               M+ R  G II+  S AG     G + Y A+K  +   + N   +L    +RV  I 
Sbjct: 117 VLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIE 176

Query: 212 PFGVATSMLVNAWRNSGDGEE 232
           P G+      +  R  GD  +
Sbjct: 177 P-GLVGGTEFSNVRFKGDDGK 196

Length = 248

>gnl|CDD|235608 PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 60.2 bits (146), Expect = 1e-10
 Identities = 64/270 (23%), Positives = 113/270 (41%), Gaps = 39/270 (14%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVI-ADVEDTLGSVLASTLAPAPVTFVHCD 86
           RL+GK   I G + G+G A      + GA+V I +  E+ L  +  +      + +V  D
Sbjct: 2   RLKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGD 61

Query: 87  VSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMA 146
           VS  E   N+I         +D L    G         ++ +F     + ++  ++K   
Sbjct: 62  VSSTESARNVIEKAAKVLNAIDGLVVTVGGYVED----TVEEFS--GLEEMLTNHIKIPL 115

Query: 147 LGIKHAARVMINRGGGCIISTASVAGVMGGLGPH-AYTASKHAIVGLTKNAACELGRYGI 205
             +  + R +  + G  I+  +S++G+        +Y  +K  +    +  A EL   GI
Sbjct: 116 YAVNASLRFL--KEGSSIVLVSSMSGIYKASPDQLSYAVAKAGLAKAVEILASELLGRGI 173

Query: 206 RVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL 265
           RVN I+P  ++           GD E E         + K++RK       LG+      
Sbjct: 174 RVNGIAPTTIS-----------GDFEPER--------NWKKLRK-------LGDDMAP-- 205

Query: 266 RSKDIAEAALYLASDESRYVSGHNLVVDGG 295
             +D A+  ++L +DE+ +V G  + VDGG
Sbjct: 206 -PEDFAKVIIWLLTDEADWVDGVVIPVDGG 234

Length = 238

>gnl|CDD|187595 cd05334, DHPR_SDR_c_like, dihydropteridine reductase (DHPR), classical (c) SDRs

 Score = 58.5 bits (142), Expect = 3e-10
 Identities = 44/185 (23%), Positives = 74/185 (40%), Gaps = 17/185 (9%)

Query: 31  GKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLE 90
            +V ++ GG   +G A V+ F   G  V   D+         +  A A +  +  D   E
Sbjct: 1   ARVVLVYGGRGALGSAVVQAFKSRGWWVASIDLA-------ENEEADASIIVLDSDSFTE 53

Query: 91  EDIENLINSTVSRYGRLDILYNNAGVL-GNQRKHKSIIDFDADEFDNVMRVNVKGMALGI 149
           +  + ++ S     G++D L   AG   G   K KS        +D + + N+    +  
Sbjct: 54  Q-AKQVVASVARLSGKVDALICVAGGWAGGSAKSKS----FVKNWDLMWKQNLWTSFIAS 108

Query: 150 KHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELG--RYGIRV 207
             A + +    GG ++ T + A +    G   Y A+K A+  LT++ A E      G   
Sbjct: 109 HLATKHL--LSGGLLVLTGAKAALEPTPGMIGYGAAKAAVHQLTQSLAAENSGLPAGSTA 166

Query: 208 NCISP 212
           N I P
Sbjct: 167 NAILP 171

Dihydropteridine reductase is an NAD-binding protein related to the SDRs. It converts dihydrobiopterin into tetrahydrobiopterin, a cofactor necessary in catecholamines synthesis. Dihydropteridine reductase has the YXXXK of these tyrosine-dependent oxidoreductases, but lacks the typical upstream Asn and Ser catalytic residues. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 221

>gnl|CDD|187663 cd09762, HSDL2_SDR_c, human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 59.0 bits (143), Expect = 3e-10
 Identities = 57/229 (24%), Positives = 85/229 (37%), Gaps = 39/229 (17%)

Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIA-------------------DVEDTLGS 69
           L GK   ITG +RGIG+A     AR GA VVIA                   ++E   G 
Sbjct: 1   LAGKTLFITGASRGIGKAIALKAARDGANVVIAAKTAEPHPKLPGTIYTAAEEIEAAGGK 60

Query: 70  VLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDF 129
            L              D+  E+ +   +   V ++G +DIL NNA  +         +D 
Sbjct: 61  ALP----------CIVDIRDEDQVRAAVEKAVEKFGGIDILVNNASAI----SLTGTLDT 106

Query: 130 DADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGG-LGPH-AYTASKH 187
               +D +M VN +G  L  K     +       I++ +    +       H AYT +K+
Sbjct: 107 PMKRYDLMMGVNTRGTYLCSKACLPYLKKSKNPHILNLSPPLNLNPKWFKNHTAYTMAKY 166

Query: 188 AIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDEC 236
            +       A E    GI VN + P     + +  A  N   G +   C
Sbjct: 167 GMSMCVLGMAEEFKPGGIAVNALWP----RTAIATAAMNMLGGVDVAAC 211

This subgroup includes human HSDL2 and related protens. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|181298 PRK08219, PRK08219, short chain dehydrogenase; Provisional

 Score = 58.8 bits (143), Expect = 3e-10
 Identities = 57/199 (28%), Positives = 79/199 (39%), Gaps = 31/199 (15%)

Query: 32  KVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEE 91
             A+ITG +RGIG A  R  A     ++     + L  + A    P    F   D++  E
Sbjct: 4   PTALITGASRGIGAAIARELAPTHTLLLGGRPAERLDELAAEL--PGATPFP-VDLTDPE 60

Query: 92  DIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMA----- 146
            I     + V + GRLD+L +NAGV         + +   DE+   + VNV   A     
Sbjct: 61  AIA----AAVEQLGRLDVLVHNAGVAD----LGPVAESTVDEWRATLEVNVVAPAELTRL 112

Query: 147 -LGIKHAAR---VMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGR 202
            L    AA    V IN G          AG+    G  +Y ASK A+  L  +A  E   
Sbjct: 113 LLPALRAAHGHVVFINSG----------AGLRANPGWGSYAASKFALRALA-DALREEEP 161

Query: 203 YGIRVNCISPFGVATSMLV 221
             +RV  + P    T M  
Sbjct: 162 GNVRVTSVHPGRTDTDMQR 180

Length = 227

>gnl|CDD|235914 PRK07041, PRK07041, short chain dehydrogenase; Provisional

 Score = 57.4 bits (139), Expect = 9e-10
 Identities = 63/262 (24%), Positives = 97/262 (37%), Gaps = 37/262 (14%)

Query: 35  IITGGARGIGEAAVRLFARHGAKVVIAD-VEDTLGSVLASTLAPAPVTFVHCDVSLEEDI 93
           ++ GG+ GIG A  R FA  GA+V IA    D L +   +    APV     D++ E  +
Sbjct: 1   LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAV 60

Query: 94  ENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAA 153
           +          G  D +   A           +           M     G A  +  AA
Sbjct: 61  DAFFAEA----GPFDHVVITAA----DTPGGPVRALPLAAAQAAMDSKFWG-AYRVARAA 111

Query: 154 RVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPF 213
           R+     GG +   +  A V          A   A+  L +  A EL    +RVN +SP 
Sbjct: 112 RI---APGGSLTFVSGFAAVRPSASGVLQGAINAALEALARGLALELAP--VRVNTVSPG 166

Query: 214 GVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSKDIAEA 273
            V T +    W  S    +  E M      +   R++               + +D+A A
Sbjct: 167 LVDTPL----W--SKLAGDAREAMFAAAAERLPARRVG--------------QPEDVANA 206

Query: 274 ALYLASDESRYVSGHNLVVDGG 295
            L+LA   + + +G  ++VDGG
Sbjct: 207 ILFLA--ANGFTTGSTVLVDGG 226

Length = 230

>gnl|CDD|235737 PRK06197, PRK06197, short chain dehydrogenase; Provisional

 Score = 57.3 bits (139), Expect = 2e-09
 Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 6/92 (6%)

Query: 31  GKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDT-----LGSVLASTLAPAPVTFVHC 85
           G+VA++TG   G+G       A  GA VV+A V +        + + +    A VT    
Sbjct: 16  GRVAVVTGANTGLGYETAAALAAKGAHVVLA-VRNLDKGKAAAARITAATPGADVTLQEL 74

Query: 86  DVSLEEDIENLINSTVSRYGRLDILYNNAGVL 117
           D++    +    ++  + Y R+D+L NNAGV+
Sbjct: 75  DLTSLASVRAAADALRAAYPRIDLLINNAGVM 106

Length = 306

>gnl|CDD|214833 smart00822, PKS_KR, This enzymatic domain is part of bacterial polyketide synthases

 Score = 55.6 bits (135), Expect = 2e-09
 Identities = 37/159 (23%), Positives = 62/159 (38%), Gaps = 14/159 (8%)

Query: 32  KVAIITGGARGIGEAAVRLFARHGAKVVI------ADVEDTLGSVLASTLAPAPVTFVHC 85
              +ITGG  G+G A  R  A  GA+ ++       D       +     A A VT V C
Sbjct: 1   GTYLITGGLGGLGRALARWLAERGARRLVLLSRSGPDAPGAAALLAELEAAGARVTVVAC 60

Query: 86  DVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGM 145
           DV+  + +  ++ +  +  G L  + + AGVL        +     + F  V+     G 
Sbjct: 61  DVADRDALAAVLAAIPAVEGPLTGVIHAAGVL----DDGVLASLTPERFAAVLAPKAAGA 116

Query: 146 ALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTA 184
                +   +  +      +  +S+AGV+G  G   Y A
Sbjct: 117 W----NLHELTADLPLDFFVLFSSIAGVLGSPGQANYAA 151

It catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 180

>gnl|CDD|219957 pfam08659, KR, KR domain

 Score = 55.2 bits (134), Expect = 3e-09
 Identities = 38/156 (24%), Positives = 64/156 (41%), Gaps = 14/156 (8%)

Query: 35  IITGGARGIGEAAVRLFARHGAKVVI------ADVEDTLGSVLASTLAPAPVTFVHCDVS 88
           ++TGG  G+G    R  A  GA+ ++      A   +    +       A VT V CDVS
Sbjct: 4   LVTGGLGGLGLELARWLAERGARHLVLLSRSGAPDPEAEALLAELEARGAEVTVVACDVS 63

Query: 89  LEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALG 148
             + +  L+    +    L  + + AGVL +      + +  A++F  V+   V     G
Sbjct: 64  DRDAVRALLAEIRADGPPLRGVIHAAGVLRD----ALLANMTAEDFARVLAPKVT----G 115

Query: 149 IKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTA 184
             +      +R     +  +S+AGV+G  G   Y A
Sbjct: 116 AWNLHEATRDRPLDFFVLFSSIAGVLGSPGQANYAA 151

This enzymatic domain is part of bacterial polyketide synthases and catalyzes the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 181

>gnl|CDD|212497 cd11731, Lin1944_like_SDR_c, Lin1944 and related proteins, classical (c) SDRs

 Score = 54.9 bits (133), Expect = 4e-09
 Identities = 43/190 (22%), Positives = 69/190 (36%), Gaps = 30/190 (15%)

Query: 34  AIITGGARGIGEAAVRLFARHGAKVVIA--DVEDTLGSVLASTLAPAPVTFVHCDVSLEE 91
            I+ G    IG A  +L + HG +V+ A     D                    D++ E 
Sbjct: 1   IIVIGATGTIGLAVAQLLSAHGHEVITAGRSSGD-----------------YQVDITDEA 43

Query: 92  DIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKH 151
            I+ L        G  D + + AG      +   + +    +F   +   + G    ++H
Sbjct: 44  SIKALFEKV----GHFDAIVSTAGDA----EFAPLAELTDADFQRGLNSKLLGQINLVRH 95

Query: 152 AARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCIS 211
               +    GG I  T+ +       G  A      A+ G  + AA EL R GIR+N +S
Sbjct: 96  GLPYL--NDGGSITLTSGILAQRPIPGGAAAATVNGALEGFVRAAAIELPR-GIRINAVS 152

Query: 212 PFGVATSMLV 221
           P  V  S+  
Sbjct: 153 PGVVEESLEA 162

Lin1944 protein from Listeria Innocua is a classical SDR, it contains a glycine-rich motif similar to the canonical motif of the SDR NAD(P)-binding site. However, the typical SDR active site residues are absent in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 198

>gnl|CDD|212495 cd09807, retinol-DH_like_SDR_c, retinol dehydrogenases (retinol-DHs), classical (c) SDRs

 Score = 55.2 bits (133), Expect = 8e-09
 Identities = 61/208 (29%), Positives = 87/208 (41%), Gaps = 25/208 (12%)

Query: 31  GKVAIITGGARGIGEAAVRLFARHGAKVVIA--DV---EDTLGSVLASTLAPAPVTFVHC 85
           GK  IITG   GIG+   R  AR GA+V++A  D+   E+    +   TL    V   H 
Sbjct: 1   GKTVIITGANTGIGKETARELARRGARVIMACRDMAKCEEAAAEIRRDTLN-HEVIVRHL 59

Query: 86  DVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGM 145
           D++  + I       ++   RLD+L NNAGV+   R   S      D F+    VN  G 
Sbjct: 60  DLASLKSIRAFAAEFLAEEDRLDVLINNAGVM---RCPYSKT---EDGFEMQFGVNHLGH 113

Query: 146 ALGIKHAARVMINRGGGCIISTASVAGVMGGLGPH------------AYTASKHAIVGLT 193
            L       ++       I++ +S+A   G +               AY  SK A V  T
Sbjct: 114 FLLTNLLLDLLKKSAPSRIVNVSSLAHKAGKINFDDLNSEKSYNTGFAYCQSKLANVLFT 173

Query: 194 KNAACELGRYGIRVNCISPFGVATSMLV 221
           +  A  L   G+ VN + P GV  + L 
Sbjct: 174 RELARRLQGTGVTVNALHP-GVVRTELG 200

Classical SDR-like subgroup containing retinol-DHs and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 274

>gnl|CDD|226476 COG3967, DltE, Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

 Score = 54.4 bits (131), Expect = 1e-08
 Identities = 55/200 (27%), Positives = 85/200 (42%), Gaps = 18/200 (9%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADV-EDTLGSVLASTLAPAPVTFVHCD 86
           +  G   +ITGGA GIG A  + F   G  V+I    E+ L    A    P   T V CD
Sbjct: 2   KTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKA--ENPEIHTEV-CD 58

Query: 87  VSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHK-SIIDFDADEFDNVMRVNVKG- 144
           V+  +    L+      Y  L++L NNAG+   QR    +  +   D+ +  +  N+   
Sbjct: 59  VADRDSRRELVEWLKKEYPNLNVLINNAGI---QRNEDLTGAEDLLDDAEQEIATNLLAP 115

Query: 145 ---MALGIKHAARVMINRGGGCIISTAS-VAGVMGGLGPHAYTASKHAIVGLTKNAACEL 200
               AL + H    ++ +    II+ +S +A V     P  Y A+K AI   T     +L
Sbjct: 116 IRLTALLLPH----LLRQPEATIINVSSGLAFVPMASTP-VYCATKAAIHSYTLALREQL 170

Query: 201 GRYGIRVNCISPFGVATSML 220
               + V  ++P  V T+  
Sbjct: 171 KDTSVEVIELAPPLVDTTEG 190

Length = 245

>gnl|CDD|187535 cd02266, SDR, Short-chain dehydrogenases/reductases (SDR)

 Score = 53.3 bits (128), Expect = 1e-08
 Identities = 46/188 (24%), Positives = 72/188 (38%), Gaps = 48/188 (25%)

Query: 34  AIITGGARGIGEAAVRLFARHGA-KVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEED 92
            ++TGG+ GIG A  R  A  G+ KV++                                
Sbjct: 1   VLVTGGSGGIGGAIARWLASRGSPKVLVVS------------------------------ 30

Query: 93  IENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHA 152
                        R D++ +NA +L + R    +ID      +  +R NV G    ++ A
Sbjct: 31  -------------RRDVVVHNAAILDDGR----LIDLTGSRIERAIRANVVGTRRLLEAA 73

Query: 153 ARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISP 212
             +M  +  G  I  +SVAG+ G  G   Y ASK A+ GL +  A E    G+    ++ 
Sbjct: 74  RELMKAKRLGRFILISSVAGLFGAPGLGGYAASKAALDGLAQQWASEGWGNGLPATAVAC 133

Query: 213 FGVATSML 220
              A S +
Sbjct: 134 GTWAGSGM 141

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase (KR) domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 186

>gnl|CDD|181020 PRK07533, PRK07533, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 54.2 bits (131), Expect = 2e-08
 Identities = 73/292 (25%), Positives = 116/292 (39%), Gaps = 55/292 (18%)

Query: 22  APPSHRRLEGKVAIITGGA--RGIGEAAVRLFARHGAKVVIADVED-TLGSV--LASTLA 76
                  L GK  ++ G A  + I     R F   GA++ +  + D     V  LA  L 
Sbjct: 1   PMQPLLPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEEL- 59

Query: 77  PAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDN 136
            AP+ F+  DV     +E +       +GRLD L ++      +  H  ++D   + F  
Sbjct: 60  DAPI-FLPLDVREPGQLEAVFARIAEEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFAL 118

Query: 137 VMRVNVKG---MALGIKHAARVMINRGGGCIISTASVAG---------VMGGLGPHAYTA 184
            M V+      MA   + A  +M N  GG ++ T S  G         +MG +       
Sbjct: 119 AMDVSCHSFIRMA---RLAEPLMTN--GGSLL-TMSYYGAEKVVENYNLMGPV------- 165

Query: 185 SKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQ 244
            K A+    +  A ELG  GIRV+ ISP  + T       R +   ++ D  +       
Sbjct: 166 -KAALESSVRYLAAELGPKGIRVHAISPGPLKT-------RAASGIDDFDALLE------ 211

Query: 245 KEVRKMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGV 296
               +     + L  L    +   D+   A +LASD +R ++G+ L +DGG 
Sbjct: 212 DAAER-----APLRRL----VDIDDVGAVAAFLASDAARRLTGNTLYIDGGY 254

Length = 258

>gnl|CDD|166421 PLN02780, PLN02780, ketoreductase/ oxidoreductase

 Score = 54.1 bits (130), Expect = 2e-08
 Identities = 56/212 (26%), Positives = 88/212 (41%), Gaps = 26/212 (12%)

Query: 23  PPSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIA--------DVEDTLGSVLAST 74
           P  + +  G  A++TG   GIG+      AR G  +V+         DV D++ S  + T
Sbjct: 45  PAKNLKKYGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKT 104

Query: 75  LAPAPVTFVHCDVS-----LEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDF 129
                V     D+      ++E IE L          + +L NN GV  +    +   + 
Sbjct: 105 QIKTVVVDFSGDIDEGVKRIKETIEGL---------DVGVLINNVGV--SYPYARFFHEV 153

Query: 130 DADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGP--HAYTASKH 187
           D +   N+++VNV+G     +     M+ R  G II+  S A ++    P    Y A+K 
Sbjct: 154 DEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIPSDPLYAVYAATKA 213

Query: 188 AIVGLTKNAACELGRYGIRVNCISPFGVATSM 219
            I   ++    E  + GI V C  P  VAT M
Sbjct: 214 YIDQFSRCLYVEYKKSGIDVQCQVPLYVATKM 245

Length = 320

>gnl|CDD|235736 PRK06196, PRK06196, oxidoreductase; Provisional

 Score = 53.9 bits (130), Expect = 3e-08
 Identities = 28/89 (31%), Positives = 41/89 (46%), Gaps = 2/89 (2%)

Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVS 88
           L GK AI+TGG  G+G    R  A+ GA V++      +     +      V  V  D++
Sbjct: 24  LSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAR--EALAGIDGVEVVMLDLA 81

Query: 89  LEEDIENLINSTVSRYGRLDILYNNAGVL 117
             E +       +    R+DIL NNAGV+
Sbjct: 82  DLESVRAFAERFLDSGRRIDILINNAGVM 110

Length = 315

>gnl|CDD|181260 PRK08159, PRK08159, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 52.8 bits (127), Expect = 5e-08
 Identities = 71/279 (25%), Positives = 109/279 (39%), Gaps = 45/279 (16%)

Query: 29  LEGKVAIITGGA--RGIGEAAVRLFARHGAKVVIADVEDTLG---SVLASTLAPAPVTFV 83
           + GK  +I G A  R I     +     GA++      D L      LA+ L        
Sbjct: 8   MAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELGA--FVAG 65

Query: 84  HCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVK 143
           HCDV+ E  I+ +  +   ++G+LD + +  G           +D   D F   M ++V 
Sbjct: 66  HCDVTDEASIDAVFETLEKKWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVY 125

Query: 144 GMALGIKHAARVMINRGGGCIISTASVA-------GVMGGLGPHAYTASKHAIVGLTKNA 196
                 + A ++M   GG  +  T   A        VMG         +K A+    K  
Sbjct: 126 SFTAVAQRAEKLM-TDGGSILTLTYYGAEKVMPHYNVMG--------VAKAALEASVKYL 176

Query: 197 ACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSG 256
           A +LG   IRVN IS   + T  L  +                GI   + + K  E+ + 
Sbjct: 177 AVDLGPKNIRVNAISAGPIKT--LAAS----------------GIGDFRYILKWNEYNAP 218

Query: 257 LGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
           L      T+  +++ ++ALYL SD SR V+G    VD G
Sbjct: 219 LRR----TVTIEEVGDSALYLLSDLSRGVTGEVHHVDSG 253

Length = 272

>gnl|CDD|236308 PRK08594, PRK08594, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 52.4 bits (126), Expect = 6e-08
 Identities = 72/281 (25%), Positives = 113/281 (40%), Gaps = 47/281 (16%)

Query: 29  LEGKVAIITGGA--RGIGEAAVRLFARHGAKVVIADVEDTLGS---VLASTLAPAPVTFV 83
           LEGK  ++ G A  R I     R     GAK+V     + L      LA TL       +
Sbjct: 5   LEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLL 64

Query: 84  HCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVK 143
            CDV+ +E+I     +     G +  + +       +      ++   D F  ++  N+ 
Sbjct: 65  PCDVTSDEEITACFETIKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGF--LLAQNIS 122

Query: 144 GMAL-GIKHAARVMINRGGGCIISTASVAG--------VMGGLGPHAYTASKHAIVGLTK 194
             +L  +   A+ ++  GG  I++   + G        VMG        AS  A V   K
Sbjct: 123 AYSLTAVAREAKKLMTEGGS-IVTLTYLGGERVVQNYNVMG-----VAKASLEASV---K 173

Query: 195 NAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFV 254
             A +LG+ GIRVN IS   + T   ++A +  G            I  + E R      
Sbjct: 174 YLANDLGKDGIRVNAISAGPIRT---LSA-KGVGGFNS--------ILKEIEER------ 215

Query: 255 SGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
                L+ TT   +++ + A +L SD SR V+G N+ VD G
Sbjct: 216 ---APLRRTT-TQEEVGDTAAFLFSDLSRGVTGENIHVDSG 252

Length = 257

>gnl|CDD|181126 PRK07806, PRK07806, short chain dehydrogenase; Provisional

 Score = 52.0 bits (125), Expect = 8e-08
 Identities = 30/99 (30%), Positives = 45/99 (45%), Gaps = 23/99 (23%)

Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVI-------------ADVEDTLGSVLASTL 75
           L GK A++TG +RGIG    ++ A  GA VV+             A++E   G   A   
Sbjct: 4   LPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASA--- 60

Query: 76  APAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNA 114
                  V  D++ EE +  L+++    +G LD L  NA
Sbjct: 61  -------VGADLTDEESVAALMDTAREEFGGLDALVLNA 92

Length = 248

>gnl|CDD|180586 PRK06483, PRK06483, dihydromonapterin reductase; Provisional

 Score = 51.9 bits (125), Expect = 8e-08
 Identities = 66/271 (24%), Positives = 101/271 (37%), Gaps = 54/271 (19%)

Query: 35  IITGGARGIGEAAVRLFARHGAKVVIA-----DVEDTLGSVLASTLAPAPVTFVHCDVSL 89
           +ITG  + IG A        G  V+++        D L    A  +          D S 
Sbjct: 6   LITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQAGAQCI--------QADFST 57

Query: 90  EEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGI 149
              I   I+        L  + +NA    +    +      AD    +M+++V    L +
Sbjct: 58  NAGIMAFIDELKQHTDGLRAIIHNA----SDWLAEKPGAPLADVLARMMQIHVNAPYL-L 112

Query: 150 KHAARVMINRGGGC---IIS-TASVAGVMGGLGPH-AYTASKHAIVGLTKNAACELGRYG 204
             A   ++   G     II  T  V  V  G   H AY ASK A+  +T + A +L    
Sbjct: 113 NLALEDLLRGHGHAASDIIHITDYV--VEKGSDKHIAYAASKAALDNMTLSFAAKLAPE- 169

Query: 205 IRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT 264
           ++VN I+P     ++++    N GD              QK + K     S L    G  
Sbjct: 170 VKVNSIAP-----ALIL---FNEGDDAAY---------RQKALAK-----SLLKIEPG-- 205

Query: 265 LRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
              ++I +   YL    S YV+G +L VDGG
Sbjct: 206 --EEEIIDLVDYLL--TSCYVTGRSLPVDGG 232

Length = 236

>gnl|CDD|187619 cd05361, haloalcohol_DH_SDR_c-like, haloalcohol dehalogenase, classical (c) SDRs

 Score = 51.8 bits (124), Expect = 9e-08
 Identities = 57/268 (21%), Positives = 94/268 (35%), Gaps = 36/268 (13%)

Query: 33  VAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEED 92
           +A++T      G A+       G  VV  D      +   +  +  P T        E+ 
Sbjct: 3   IALVTHARHFAGPASAEALTEDGYTVVCHDASFADAAERQAFESENPGTKALS----EQK 58

Query: 93  IENLINSTVSRYGRLDILYNN---AGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGI 149
            E L+++ +   G +D+L +N      +            +AD       +++   AL +
Sbjct: 59  PEELVDAVLQAGGAIDVLVSNDYIPRPMNPIDGTS-----EADIRQAFEALSIFPFAL-L 112

Query: 150 KHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNC 209
           + A   M   GGG II   S            Y  ++ A V L ++ A EL R  I V  
Sbjct: 113 QAAIAQMKKAGGGSIIFITSAVPKKPLAYNSLYGPARAAAVALAESLAKELSRDNILVYA 172

Query: 210 ISP--FGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRS 267
           I P  F   T    + W N+                  E+R+  +    LG L     R 
Sbjct: 173 IGPNFFNSPTYFPTSDWENN-----------------PELRERVKRDVPLGRLG----RP 211

Query: 268 KDIAEAALYLASDESRYVSGHNLVVDGG 295
            ++     +LAS  +  ++G      GG
Sbjct: 212 DEMGALVAFLASRRADPITGQFFAFAGG 239

Dehalogenases cleave carbon-halogen bonds. Haloalcohol dehalogenase show low sequence similarity to short-chain dehydrogenases/reductases (SDRs). Like the SDRs, haloalcohol dehalogenases have a conserved catalytic triad (Ser-Tyr-Lys/Arg), and form a Rossmann fold. However, the normal classical SDR NAD(P)-binding motif (TGXXGXG) and NAD-binding function is replaced with a halide binding site, allowing the enzyme to catalyze a dehalogenation reaction. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|180343 PRK05993, PRK05993, short chain dehydrogenase; Provisional

 Score = 51.2 bits (123), Expect = 2e-07
 Identities = 55/196 (28%), Positives = 79/196 (40%), Gaps = 15/196 (7%)

Query: 32  KVAIITGGARGIGEAAVRLFARHGAKVVIADV---EDTLGSVLASTLAPAPVTFVHCDVS 88
           +  +ITG + GIG    R     G +V  A     ED       + L    +     D +
Sbjct: 5   RSILITGCSSGIGAYCARALQSDGWRV-FATCRKEEDV------AALEAEGLEAFQLDYA 57

Query: 89  LEEDIENLINSTVSRY-GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMAL 147
             E I  L+   +    GRLD L+NN G  G   +  ++ D   +        N  G   
Sbjct: 58  EPESIAALVAQVLELSGGRLDALFNN-GAYG---QPGAVEDLPTEALRAQFEANFFGWHD 113

Query: 148 GIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRV 207
             +    VM  +G G I+  +S+ G++      AY ASK AI GL+     EL   GI V
Sbjct: 114 LTRRVIPVMRKQGQGRIVQCSSILGLVPMKYRGAYNASKFAIEGLSLTLRMELQGSGIHV 173

Query: 208 NCISPFGVATSMLVNA 223
           + I P  + T    NA
Sbjct: 174 SLIEPGPIETRFRANA 189

Length = 277

>gnl|CDD|235694 PRK06079, PRK06079, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 50.9 bits (122), Expect = 2e-07
 Identities = 71/288 (24%), Positives = 108/288 (37%), Gaps = 63/288 (21%)

Query: 29  LEGKVAIITGGA--RGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCD 86
           L GK  ++ G A  R I     +     GA V+     D +   L   L       V CD
Sbjct: 5   LSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDRMKKSL-QKLVDEEDLLVECD 63

Query: 87  VSLEEDIENLINSTVSRYGRLD-----ILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVN 141
           V+ +E IE    +   R G++D     I Y     LG      ++ D   D +     ++
Sbjct: 64  VASDESIERAFATIKERVGKIDGIVHAIAYAKKEELGG-----NVTDTSRDGYALAQDIS 118

Query: 142 VKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAI-----VGLTKNA 196
              + + +   AR ++N G   +  T              Y  S+ AI     +G+ K A
Sbjct: 119 AYSL-IAVAKYARPLLNPGASIVTLT--------------YFGSERAIPNYNVMGIAKAA 163

Query: 197 --------ACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVR 248
                   A +LG+ GIRVN IS   V T  +                   GI   K++ 
Sbjct: 164 LESSVRYLARDLGKKGIRVNAISAGAVKTLAVT------------------GIKGHKDLL 205

Query: 249 KMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGV 296
           K  +  +  G   G T+   ++   A +L SD S  V+G  + VD GV
Sbjct: 206 KESDSRTVDG--VGVTIE--EVGNTAAFLLSDLSTGVTGDIIYVDKGV 249

Length = 252

>gnl|CDD|169556 PRK08703, PRK08703, short chain dehydrogenase; Provisional

 Score = 50.3 bits (120), Expect = 2e-07
 Identities = 55/205 (26%), Positives = 85/205 (41%), Gaps = 38/205 (18%)

Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIAD-----VEDTLGSVLASTLAPAPVTFV 83
           L  K  ++TG ++G+GE   + +A  GA V++       +E    +++ +   P P    
Sbjct: 4   LSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAG-HPEPFAIR 62

Query: 84  HCDVSLEEDIENLINSTVSR--YGRLDILYNNAGV------LGNQRKHKSIIDFDADEFD 135
              +S EE       +T++    G+LD + + AG       L  Q            E+ 
Sbjct: 63  FDLMSAEEKEFEQFAATIAEATQGKLDGIVHCAGYFYALSPLDFQT---------VAEWV 113

Query: 136 NVMRVN-VKGMALGIKHAARVMINRGGGCIISTASV--AGVMGGLGPHAY----TASKHA 188
           N  R+N V  M L    A   ++ +        ASV   G   G  P AY     ASK A
Sbjct: 114 NQYRINTVAPMGL--TRALFPLLKQS-----PDASVIFVGESHGETPKAYWGGFGASKAA 166

Query: 189 IVGLTKNAACELGRYG-IRVNCISP 212
           +  L K AA E  R+G +R N + P
Sbjct: 167 LNYLCKVAADEWERFGNLRANVLVP 191

Length = 239

>gnl|CDD|169390 PRK08340, PRK08340, glucose-1-dehydrogenase; Provisional

 Score = 49.4 bits (118), Expect = 6e-07
 Identities = 65/277 (23%), Positives = 115/277 (41%), Gaps = 32/277 (11%)

Query: 35  IITGGARGIGEAAVRLFARHGAKVVIADV-EDTLGSVLASTLAPAPVTFVHCDVSLEEDI 93
           ++T  +RGIG    R   + GA+VVI+   E+ L   L        V  V  D+S ++D+
Sbjct: 4   LVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDL 63

Query: 94  ENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAA 153
           +NL+       G +D L  NA   GN R    ++  +A   D +    +  +A G     
Sbjct: 64  KNLVKEAWELLGGIDALVWNA---GNVRCEPCMLH-EAGYSDWLEAALLHLVAPGYLTTL 119

Query: 154 RV---MINRGGGCIISTASVAGVMGGLGPHAYTASKHA-IVGLTKNAACELGRYGIRVNC 209
            +   +  +  G ++  +SV+ V   + P        A +V L K  +   G  GIR   
Sbjct: 120 LIQAWLEKKMKGVLVYLSSVS-VKEPMPPLVLADVTRAGLVQLAKGVSRTYGGKGIR--- 175

Query: 210 ISPFGVATSMLVNAWRNSGDGEE-----EDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT 264
                 A ++L+ ++   G  E      E+  ++F    ++EV +              T
Sbjct: 176 ------AYTVLLGSFDTPGARENLARIAEERGVSFEETWEREVLERTPL--------KRT 221

Query: 265 LRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTSRN 301
            R +++     +L S+ + Y+ G  +V DG +T   N
Sbjct: 222 GRWEELGSLIAFLLSENAEYMLGSTIVFDGAMTRGVN 258

Length = 259

>gnl|CDD|180949 PRK07370, PRK07370, enoyl-(acyl carrier protein) reductase; Validated

 Score = 47.0 bits (112), Expect = 4e-06
 Identities = 72/276 (26%), Positives = 111/276 (40%), Gaps = 36/276 (13%)

Query: 29  LEGKVAIITGGA--RGIGEAAVRLFARHGAKVVIADVEDTLG---SVLASTLAP-APVTF 82
           L GK A++TG A  R I     +     GA++ I  + D  G     +     P  P  F
Sbjct: 4   LTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLF 63

Query: 83  VHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDA---DEFDNVMR 139
           + CDV  +  IE    +   ++G+LDIL +    L    K + I DF A   + F   + 
Sbjct: 64  LPCDVQDDAQIEETFETIKQKWGKLDILVH---CLAFAGKEELIGDFSATSREGFARALE 120

Query: 140 VNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACE 199
           ++   +A   K A  +M    GG I++   + GV      +    +K A+    +  A E
Sbjct: 121 ISAYSLAPLCKAAKPLM--SEGGSIVTLTYLGGVRAIPNYNVMGVAKAALEASVRYLAAE 178

Query: 200 LGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGN 259
           LG   IRVN IS   + T        +S  G         GI        M   V     
Sbjct: 179 LGPKNIRVNAISAGPIRT------LASSAVG---------GI------LDMIHHVEEKAP 217

Query: 260 LKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
           L+  T+   ++   A +L SD +  ++G  + VD G
Sbjct: 218 LR-RTVTQTEVGNTAAFLLSDLASGITGQTIYVDAG 252

Length = 258

>gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 46.9 bits (111), Expect = 5e-06
 Identities = 41/192 (21%), Positives = 63/192 (32%), Gaps = 34/192 (17%)

Query: 35  IITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIE 94
           ++TGGA  IG   V      G  V   D               + V FV  D++  + ++
Sbjct: 4   LVTGGAGFIGSHLVERLLAAGHDVRGLDRLRD-----GLDPLLSGVEFVVLDLTDRDLVD 58

Query: 95  NLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAAR 154
            L        G  D + + A          S+ D +A +    + VNV     G  +   
Sbjct: 59  ELAK------GVPDAVIHLAAQS-------SVPDSNASDPAEFLDVNV----DGTLNLLE 101

Query: 155 VMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIV-----GLTKNAACEL------GRY 203
                G    +  +SV+ V G   P                G++K  A E         Y
Sbjct: 102 AARAAGVKRFVFASSVSVVYGDPPPLPIDEDLGPPRPLNPYGVSK-LAAEQLLRAYARLY 160

Query: 204 GIRVNCISPFGV 215
           G+ V  + PF V
Sbjct: 161 GLPVVILRPFNV 172

Length = 314

>gnl|CDD|187568 cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, extended (e) SDRs

 Score = 46.9 bits (112), Expect = 6e-06
 Identities = 22/72 (30%), Positives = 31/72 (43%), Gaps = 7/72 (9%)

Query: 32 KVAIITGGARGIGEAAVRLFARHGAKVVIAD------VEDTLGSVLASTLAPAPVTFVHC 85
             +ITGGA  IG    R F + G +V+  D          L  + A+      V FVH 
Sbjct: 1  MRVLITGGAGFIGSNLARFFLKQGWEVIGFDNLMRRGSFGNLAWLKANREDGG-VRFVHG 59

Query: 86 DVSLEEDIENLI 97
          D+    D+E+L 
Sbjct: 60 DIRNRNDLEDLF 71

CDP-tyvelose 2-epimerase is a tetrameric SDR that catalyzes the conversion of CDP-D-paratose to CDP-D-tyvelose, the last step in tyvelose biosynthesis. This subgroup is a member of the extended SDR subfamily, with a characteristic active site tetrad and NAD-binding motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 337

>gnl|CDD|187669 cd09809, human_WWOX_like_SDR_c-like, human WWOX (WW domain-containing oxidoreductase)-like, classical (c)-like SDRs

 Score = 46.1 bits (109), Expect = 8e-06
 Identities = 28/92 (30%), Positives = 41/92 (44%), Gaps = 4/92 (4%)

Query: 31  GKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL----APAPVTFVHCD 86
           GKV IITG   GIG    R FA HGA V++A    +  S   S +      A V  +  D
Sbjct: 1   GKVIIITGANSGIGFETARSFALHGAHVILACRNMSRASAAVSRILEEWHKARVEAMTLD 60

Query: 87  VSLEEDIENLINSTVSRYGRLDILYNNAGVLG 118
           ++    ++    +  ++   L +L  NA V  
Sbjct: 61  LASLRSVQRFAEAFKAKNSPLHVLVCNAAVFA 92

Classical-like SDR domain of human WWOX and related proteins. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 284

>gnl|CDD|187582 cd05274, KR_FAS_SDR_x, ketoreductase (KR) and fatty acid synthase (FAS), complex (x) SDRs

 Score = 46.2 bits (110), Expect = 1e-05
 Identities = 36/155 (23%), Positives = 61/155 (39%), Gaps = 14/155 (9%)

Query: 35  IITGGARGIGEAAVRLFARHGAKVVI-----ADVEDTLGSVLASTLAPAPVTFVHCDVSL 89
           +ITGG  G+G    R  A  GA+ ++                      A V+ V CDV+ 
Sbjct: 154 LITGGLGGLGLLVARWLAARGARHLVLLSRRGPAPRAAARAALLRAGGARVSVVRCDVTD 213

Query: 90  EEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGI 149
              +  L+ + ++  G L  + + AGVL +      + +     F  V+   V G     
Sbjct: 214 PAALAALL-AELAAGGPLAGVIHAAGVLRDAL----LAELTPAAFAAVLAAKVAGAL--- 265

Query: 150 KHAARVMINRGGGCIISTASVAGVMGGLGPHAYTA 184
            +   +  +      +  +SVA ++GG G  AY A
Sbjct: 266 -NLHELTPDLPLDFFVLFSSVAALLGGAGQAAYAA 299

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. In some instances, such as porcine FAS, an enoyl reductase (ER) module is inserted between the sub-domains. Fatty acid synthesis occurs via the stepwise elongation of a chain (which is attached to acyl carrier protein, ACP) with 2-carbon units. Eukaryotic systems consist of large, multifunctional synthases (type I) while bacterial, type II systems, use single function proteins. Fungal fatty acid synthase uses a dodecamer of 6 alpha and 6 beta subunits. In mammalian type FAS cycles, ketoacyl synthase forms acetoacetyl-ACP which is reduced by the NADP-dependent beta-KR, forming beta-hydroxyacyl-ACP, which is in turn dehydrated by dehydratase to a beta-enoyl intermediate, which is reduced by NADP-dependent beta-ER. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 375

>gnl|CDD|181416 PRK08415, PRK08415, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 45.9 bits (109), Expect = 1e-05
 Identities = 61/279 (21%), Positives = 111/279 (39%), Gaps = 45/279 (16%)

Query: 29  LEGKVAIITGGA--RGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVH-C 85
           ++GK  +I G A  + I     +     GA++    + + L   +          +V+  
Sbjct: 3   MKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSDYVYEL 62

Query: 86  DVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGM 145
           DVS  E  ++L  S     G++D + ++      +    S ++   + F+  M ++V  +
Sbjct: 63  DVSKPEHFKSLAESLKKDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSL 122

Query: 146 ALGIKHAARVMINRGGGCIISTASVAG---------VMGGLGPHAYTASKHAIVGLTKNA 196
            + +  A   ++N G    + T S  G         VMG         +K A+    +  
Sbjct: 123 -IELTRALLPLLNDGAS--VLTLSYLGGVKYVPHYNVMG--------VAKAALESSVRYL 171

Query: 197 ACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSG 256
           A +LG+ GIRVN IS   + T  L  +                GI   + + K  E  + 
Sbjct: 172 AVDLGKKGIRVNAISAGPIKT--LAAS----------------GIGDFRMILKWNEINAP 213

Query: 257 LGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
           L   K  ++  +++  + +YL SD S  V+G    VD G
Sbjct: 214 L--KKNVSI--EEVGNSGMYLLSDLSSGVTGEIHYVDAG 248

Length = 274

>gnl|CDD|236173 PRK08177, PRK08177, short chain dehydrogenase; Provisional

 Score = 45.0 bits (107), Expect = 1e-05
 Identities = 51/196 (26%), Positives = 83/196 (42%), Gaps = 21/196 (10%)

Query: 32  KVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCD--VSL 89
           + A+I G +RG+G   V      G + V A V           L    +  +  +   SL
Sbjct: 2   RTALIIGASRGLGLGLVDRLLERGWQ-VTATVRGPQQDTALQALPGVHIEKLDMNDPASL 60

Query: 90  EEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALG- 148
           ++ ++ L      +  R D+L+ NAG+ G    H+S  D  A E   +   N    A+  
Sbjct: 61  DQLLQRL------QGQRFDLLFVNAGISGPA--HQSAADATAAEIGQLFLTN----AIAP 108

Query: 149 IKHAARVM--INRGGGCIISTASVAGVMG-GLGPHA--YTASKHAIVGLTKNAACELGRY 203
           I+ A R++  +  G G +   +S  G +    G     Y ASK A+  +T++   ELG  
Sbjct: 109 IRLARRLLGQVRPGQGVLAFMSSQLGSVELPDGGEMPLYKASKAALNSMTRSFVAELGEP 168

Query: 204 GIRVNCISPFGVATSM 219
            + V  + P  V T M
Sbjct: 169 TLTVLSMHPGWVKTDM 184

Length = 225

>gnl|CDD|180838 PRK07102, PRK07102, short chain dehydrogenase; Provisional

 Score = 44.5 bits (106), Expect = 2e-05
 Identities = 50/193 (25%), Positives = 74/193 (38%), Gaps = 22/193 (11%)

Query: 36  ITGGARGIGEAAVRLFARHGAKVVIA--DVE--DTLGSVLASTLAPAPVTFVHCDVSLEE 91
           I G    I  A  R +A  GA++ +A  DVE  + L   L +  A   V+    D+    
Sbjct: 6   IIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGA-VAVSTHELDILDTA 64

Query: 92  DIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKH 151
                ++S        DI+    G LG+Q   ++    D        R N +G    +  
Sbjct: 65  SHAAFLDSLP---ALPDIVLIAVGTLGDQAACEA----DPALALREFRTNFEGPIALLTL 117

Query: 152 AARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACE-----LGRYGIR 206
            A     RG G I+  +SVAG  G    + Y ++K     LT  A        L + G+ 
Sbjct: 118 LANRFEARGSGTIVGISSVAGDRGRASNYVYGSAK---AALT--AFLSGLRNRLFKSGVH 172

Query: 207 VNCISPFGVATSM 219
           V  + P  V T M
Sbjct: 173 VLTVKPGFVRTPM 185

Length = 243

>gnl|CDD|187665 cd09805, type2_17beta_HSD-like_SDR_c, human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs

 Score = 44.6 bits (106), Expect = 3e-05
 Identities = 47/202 (23%), Positives = 82/202 (40%), Gaps = 17/202 (8%)

Query: 32  KVAIITGGARGIGEAAVRLFARHGAKVVIADV--EDTLGSVLASTLAPAPVTFVHCDVSL 89
           K  +ITG   G G    +     G  V +A    ++  G+     +    +  +  DV+ 
Sbjct: 1   KAVLITGCDSGFGNLLAKKLDSLGFTV-LAGCLTKNGPGAKELRRVCSDRLRTLQLDVTK 59

Query: 90  EEDIENLINSTVSRYGRLDI--LYNNAGVLGNQRKHKSIIDFDA---DEFDNVMRVNVKG 144
            E I+          G   +  L NNAG+LG         D +    D++   M VN+ G
Sbjct: 60  PEQIKRAAQWVKEHVGEKGLWGLVNNAGILGF------GGDEELLPMDDYRKCMEVNLFG 113

Query: 145 MALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYG 204
             + +  A   ++ R  G +++ +S+ G +      AY ASK A+   + +   EL  +G
Sbjct: 114 -TVEVTKAFLPLLRRAKGRVVNVSSMGGRVPFPAGGAYCASKAAVEAFSDSLRRELQPWG 172

Query: 205 IRVNCISP--FGVATSMLVNAW 224
           ++V+ I P  F    +     W
Sbjct: 173 VKVSIIEPGNFKTGITGNSELW 194

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical-SDR subgroup includes the human proteins: type 2 17beta-HSD, type 6 17beta-HSD, type 2 11beta-HSD, dehydrogenase/reductase SDR family member 9, short-chain dehydrogenase/reductase family 9C member 7, 3-hydroxybutyrate dehydrogenase type 1, and retinol dehydrogenase 5. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 281

>gnl|CDD|181113 PRK07775, PRK07775, short chain dehydrogenase; Provisional

 Score = 43.6 bits (103), Expect = 6e-05
 Identities = 42/196 (21%), Positives = 79/196 (40%), Gaps = 22/196 (11%)

Query: 34  AIITGGARGIGEAAVRLFARHGAKVV-----IADVEDTLGSVLASTLAPAPVTFVHCDVS 88
           A++ G + GIG A     A  G  V      +   E+ +  + A             DV+
Sbjct: 13  ALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRA---DGGEAVAFPLDVT 69

Query: 89  LEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALG 148
             + +++ +       G +++L + AG     + H    +   ++F++ +++++ G    
Sbjct: 70  DPDSVKSFVAQAEEALGEIEVLVSGAGDTYFGKLH----EISTEQFESQVQIHLVGAN-- 123

Query: 149 IKHAARV---MINRGGGCIISTASVAGVMGGLGPH--AYTASKHAIVGLTKNAACELGRY 203
            + A  V   MI R  G +I   S   +     PH  AY A+K  +  +  N   EL   
Sbjct: 124 -RLATAVLPGMIERRRGDLIFVGSDVALRQR--PHMGAYGAAKAGLEAMVTNLQMELEGT 180

Query: 204 GIRVNCISPFGVATSM 219
           G+R + + P    T M
Sbjct: 181 GVRASIVHPGPTLTGM 196

Length = 274

>gnl|CDD|168626 PRK06603, PRK06603, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 43.5 bits (102), Expect = 7e-05
 Identities = 65/279 (23%), Positives = 106/279 (37%), Gaps = 45/279 (16%)

Query: 29  LEGKVAIITGGAR--GIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFV-HC 85
           L+GK  +ITG A    I  A  +L  +HGA++      + L   +          FV   
Sbjct: 6   LQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIGCNFVSEL 65

Query: 86  DVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGM 145
           DV+  + I NL +    ++G  D L +              +D   + F N + ++   +
Sbjct: 66  DVTNPKSISNLFDDIKEKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSL 125

Query: 146 ALGIKHAARVMINRGGGCIISTASVA-------GVMGGLGPHAYTASKHAIVGLTKNAAC 198
            L +  +A  +++ GG  +  T   A        VMG         +K A+    K  A 
Sbjct: 126 -LELSRSAEALMHDGGSIVTLTYYGAEKVIPNYNVMG--------VAKAALEASVKYLAN 176

Query: 199 ELGRYGIRVNCIS--PFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSG 256
           ++G   IRVN IS  P     S  +                        +   M +  + 
Sbjct: 177 DMGENNIRVNAISAGPIKTLASSAIG-----------------------DFSTMLKSHAA 213

Query: 257 LGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
              LK  T + +D+  AA+YL S+ S+ V+G    VD G
Sbjct: 214 TAPLKRNTTQ-EDVGGAAVYLFSELSKGVTGEIHYVDCG 251

Length = 260

>gnl|CDD|181198 PRK08017, PRK08017, oxidoreductase; Provisional

 Score = 41.6 bits (98), Expect = 2e-04
 Identities = 53/191 (27%), Positives = 79/191 (41%), Gaps = 27/191 (14%)

Query: 32  KVAIITGGARGIGEAAVRLFARHGAKVVIA-----DVE--DTLGSVLASTLAPAPVTFVH 84
           K  +ITG + GIG  A     R G +V+ A     DV   ++LG            T + 
Sbjct: 3   KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNSLG-----------FTGIL 51

Query: 85  CDVSLEEDIENLINSTVS-RYGRLDILYNNAG--VLGNQRKHKSIIDFDADEFDNVMRVN 141
            D+   E +E   +  ++    RL  L+NNAG  V G       +      + +     N
Sbjct: 52  LDLDDPESVERAADEVIALTDNRLYGLFNNAGFGVYG------PLSTISRQQMEQQFSTN 105

Query: 142 VKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELG 201
             G           M+  G G I+ T+SV G++   G  AY ASK+A+   +     EL 
Sbjct: 106 FFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLISTPGRGAYAASKYALEAWSDALRMELR 165

Query: 202 RYGIRVNCISP 212
             GI+V+ I P
Sbjct: 166 HSGIKVSLIEP 176

Length = 256

>gnl|CDD|187670 cd09810, LPOR_like_SDR_c_like, light-dependent protochlorophyllide reductase (LPOR)-like, classical (c)-like SDRs

 Score = 41.7 bits (98), Expect = 2e-04
 Identities = 29/113 (25%), Positives = 48/113 (42%), Gaps = 6/113 (5%)

Query: 32  KVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLAST---LAPAPVTFVHCDVS 88
              +ITG + G+G AA +  AR G   V+    D L +  A+    +     + +HCD++
Sbjct: 2   GTVVITGASSGLGLAAAKALARRGEWHVVMACRDFLKAEQAAQEVGMPKDSYSVLHCDLA 61

Query: 89  LEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVN 141
             + +   +++       LD L  NA V            F AD F+  + VN
Sbjct: 62  SLDSVRQFVDNFRRTGRPLDALVCNAAV---YLPTAKEPRFTADGFELTVGVN 111

Classical SDR-like subgroup containing LPOR and related proteins. Protochlorophyllide (Pchlide) reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 311

>gnl|CDD|180399 PRK06101, PRK06101, short chain dehydrogenase; Provisional

 Score = 40.2 bits (94), Expect = 6e-04
 Identities = 43/193 (22%), Positives = 74/193 (38%), Gaps = 23/193 (11%)

Query: 33  VAIITGGARGIGEAAVRLFARHGAKVVIADV-EDTLGSVLASTLAPAPVTFVHCDVSLEE 91
             +ITG   GIG+     +A+ G +V+     +  L  +   +     + F   DV+   
Sbjct: 3   AVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQSANIFTLAF---DVTDHP 59

Query: 92  DIENLINS-----TVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMA 146
             +  ++       +  +   D  Y + G +            DA     V  VNV G+A
Sbjct: 60  GTKAALSQLPFIPELWIFNAGDCEYMDDGKV------------DATLMARVFNVNVLGVA 107

Query: 147 LGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIR 206
             I+   +  ++ G   +I   S+A  +      AY ASK A+    +    +L   GI 
Sbjct: 108 NCIE-GIQPHLSCGHRVVI-VGSIASELALPRAEAYGASKAAVAYFARTLQLDLRPKGIE 165

Query: 207 VNCISPFGVATSM 219
           V  + P  VAT +
Sbjct: 166 VVTVFPGFVATPL 178

Length = 240

>gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family

 Score = 39.6 bits (93), Expect = 8e-04
 Identities = 39/195 (20%), Positives = 67/195 (34%), Gaps = 39/195 (20%)

Query: 34  AIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDI 93
            ++TGG   IG   VR   + G +V    +        + +L    + F   D++  + +
Sbjct: 1   ILVTGGTGFIGSHLVRRLLQEGYEV----IVLGRRRR-SESLNTGRIRFHEGDLTDPDAL 55

Query: 94  ENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGM-----ALG 148
           E L+        + D + + A   G     +   DF        +R NV G      A  
Sbjct: 56  ERLL-----AEVQPDAVIHLAAQSGVGASFEDPADF--------IRANVLGTLRLLEAAR 102

Query: 149 IKHAARVMINRGGGCIISTASVAGVMGG--------LGPH-AYTASKHAIVGLTKNAACE 199
                R +         S++ V G +          LGP   Y A+K A   L +  A  
Sbjct: 103 RAGVKRFV-------FASSSEVYGDVADPPITEDTPLGPLSPYAAAKLAAERLVEAYARA 155

Query: 200 LGRYGIRVNCISPFG 214
            G   + +   + +G
Sbjct: 156 YGLRAVILRLFNVYG 170

This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233

>gnl|CDD|180774 PRK06953, PRK06953, short chain dehydrogenase; Provisional

 Score = 39.3 bits (92), Expect = 0.001
 Identities = 41/160 (25%), Positives = 58/160 (36%), Gaps = 10/160 (6%)

Query: 32  KVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEE 91
           K  +I G +RGIG   VR +   G + VIA   D         L    +     DV+   
Sbjct: 2   KTVLIVGASRGIGREFVRQYRADGWR-VIATARDAAALAALQALGAEALAL---DVADPA 57

Query: 92  DIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKH 151
            +  L          LD     AGV G   + + +     ++FD VM  NV G    +  
Sbjct: 58  SVAGLAWKLDGE--ALDAAVYVAGVYG--PRTEGVEPITREDFDAVMHTNVLGPMQLLPI 113

Query: 152 AARVMINRGG--GCIISTASVAGVMGGLGPHAYTASKHAI 189
              ++   GG    + S     G   G     Y ASK A+
Sbjct: 114 LLPLVEAAGGVLAVLSSRMGSIGDATGTTGWLYRASKAAL 153

Length = 222

>gnl|CDD|187668 cd09808, DHRS-12_like_SDR_c-like, human dehydrogenase/reductase SDR family member (DHRS)-12/FLJ13639-like, classical (c)-like SDRs

 Score = 39.1 bits (91), Expect = 0.001
 Identities = 25/98 (25%), Positives = 43/98 (43%), Gaps = 8/98 (8%)

Query: 31  GKVAIITGGARGIGEAAVRLFARHGAKVVI-----ADVEDTLGSVLASTLAPAPVTFVH- 84
           G+  +ITG   GIG+AA    A+ G  V +        E+    +   +       F+H 
Sbjct: 1   GRSFLITGANSGIGKAAALAIAKRGGTVHMVCRNQTRAEEARKEIETES--GNQNIFLHI 58

Query: 85  CDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRK 122
            D+S  + +   +        +L +L NNAG + N+R+
Sbjct: 59  VDMSDPKQVWEFVEEFKEEGKKLHVLINNAGCMVNKRE 96

Classical SDR-like subgroup containing human DHRS-12/FLJ13639, the 36K protein of zebrafish CNS myelin, and related proteins. DHRS-12/FLJ13639 is expressed in neurons and oligodendrocytes in the human cerebral cortex. Proteins in this subgroup share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 255

>gnl|CDD|187645 cd08941, 3KS_SDR_c, 3-keto steroid reductase, classical (c) SDRs

 Score = 39.3 bits (92), Expect = 0.002
 Identities = 32/100 (32%), Positives = 44/100 (44%), Gaps = 13/100 (13%)

Query: 32  KVAIITGGARGIGEA-AVRLFA----RHGAKVVIA-----DVEDTLGSVLASTLAPAPVT 81
           KV ++TG   G+G A   RL A         +++A       E    ++LAS    A V 
Sbjct: 2   KVVLVTGANSGLGLAICERLLAEDDENPELTLILACRNLQRAEAACRALLAS-HPDARVV 60

Query: 82  F--VHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGN 119
           F  V  D+S    +         RY RLD LY NAG++ N
Sbjct: 61  FDYVLVDLSNMVSVFAAAKELKKRYPRLDYLYLNAGIMPN 100

3-keto steroid reductase (in concert with other enzymes) catalyzes NADP-dependent sterol C-4 demethylation, as part of steroid biosynthesis. 3-keto reductase is a classical SDR, with a well conserved canonical active site tetrad and fairly well conserved characteristic NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 290

>gnl|CDD|212496 cd11730, Tthb094_like_SDR_c, Tthb094 and related proteins, classical (c) SDRs

 Score = 37.5 bits (87), Expect = 0.004
 Identities = 47/185 (25%), Positives = 77/185 (41%), Gaps = 17/185 (9%)

Query: 34  AIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDI 93
           A+I G   GIG A  R  A  G +++++  +      LA   A         DV+ E ++
Sbjct: 1   ALILGATGGIGRALARALAGRGWRLLLSGRD---AGALAGLAAEVGALARPADVAAELEV 57

Query: 94  ENLINSTVSRYGRLDILYNNAG-VLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHA 152
             L        G LD+L   AG +LG     K +       +  ++  N+ G AL +KHA
Sbjct: 58  WALAQEL----GPLDLLVYAAGAILG-----KPLARTKPAAWRRILDANLTGAALVLKHA 108

Query: 153 ARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISP 212
             ++        +       ++ GL   AY A+K A+    + A  E+   G+R+  + P
Sbjct: 109 LALLAAGARLVFLGAYPELVMLPGLS--AYAAAKAALEAYVEVARKEV--RGLRLTLVRP 164

Query: 213 FGVAT 217
             V T
Sbjct: 165 PAVDT 169

Tthb094 from Thermus Thermophilus is a classical SDR which binds NADP. Members of this subgroup contain the YXXXK active site characteristic of SDRs. Also, an upstream Asn residue of the canonical catalytic tetrad is partially conserved in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 206

>gnl|CDD|180753 PRK06924, PRK06924, short chain dehydrogenase; Provisional

 Score = 37.7 bits (88), Expect = 0.004
 Identities = 47/199 (23%), Positives = 85/199 (42%), Gaps = 18/199 (9%)

Query: 32  KVAIITGGARGIGEAAVRLFARHGAKVV-IADVEDTLGSVLASTLAPAPVTFVHCDVSLE 90
           +  IITG ++G+GEA        G  V+ I+  E+   + LA       +TF   D+   
Sbjct: 2   RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAEQYNSN-LTFHSLDLQDV 60

Query: 91  EDIENLINSTVSRYGRLDI----LYNNAGVLGNQRKHKSIIDFDADEFDNVMRVN-VKGM 145
            ++E   N  +S     ++    L NNAG++   +  +     +++E    + +N +  M
Sbjct: 61  HELETNFNEILSSIQEDNVSSIHLINNAGMVAPIKPIEKA---ESEELITNVHLNLLAPM 117

Query: 146 ALG---IKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACE--L 200
            L    +KH       +    +I+ +S A      G  AY +SK  +   T+  A E   
Sbjct: 118 ILTSTFMKHTKDW---KVDKRVINISSGAAKNPYFGWSAYCSSKAGLDMFTQTVATEQEE 174

Query: 201 GRYGIRVNCISPFGVATSM 219
             Y +++   SP  + T+M
Sbjct: 175 EEYPVKIVAFSPGVMDTNM 193

Length = 251

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	305
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	100.0
PRK08339	263	short chain dehydrogenase; Provisional	100.0
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07063	260	short chain dehydrogenase; Provisional	100.0
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	100.0
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	100.0
PRK06114	254	short chain dehydrogenase; Provisional	100.0
PRK05867	253	short chain dehydrogenase; Provisional	100.0
KOG0725	270	consensus Reductases with broad range of substrate	100.0
PRK07062	265	short chain dehydrogenase; Provisional	100.0
PRK08589	272	short chain dehydrogenase; Validated	100.0
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07478	254	short chain dehydrogenase; Provisional	100.0
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	100.0
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	100.0
PRK06398	258	aldose dehydrogenase; Validated	100.0
PRK08265	261	short chain dehydrogenase; Provisional	100.0
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	100.0
PRK08340	259	glucose-1-dehydrogenase; Provisional	100.0
PRK08085	254	gluconate 5-dehydrogenase; Provisional	100.0
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08277	278	D-mannonate oxidoreductase; Provisional	100.0
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	100.0
PRK06128	300	oxidoreductase; Provisional	100.0
PRK07791	286	short chain dehydrogenase; Provisional	100.0
PRK07985	294	oxidoreductase; Provisional	100.0
PLN02253	280	xanthoxin dehydrogenase	100.0
COG0300	265	DltE Short-chain dehydrogenases of various substra	100.0
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK12747	252	short chain dehydrogenase; Provisional	100.0
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	100.0
PRK07035	252	short chain dehydrogenase; Provisional	100.0
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	100.0
PRK06172	253	short chain dehydrogenase; Provisional	100.0
PRK07523	255	gluconate 5-dehydrogenase; Provisional	100.0
PRK06841	255	short chain dehydrogenase; Provisional	100.0
PRK07831	262	short chain dehydrogenase; Provisional	100.0
PRK08643	256	acetoin reductase; Validated	100.0
PRK06523	260	short chain dehydrogenase; Provisional	100.0
PRK06125	259	short chain dehydrogenase; Provisional	100.0
PRK07856	252	short chain dehydrogenase; Provisional	100.0
PRK08936	261	glucose-1-dehydrogenase; Provisional	100.0
PRK06484	520	short chain dehydrogenase; Validated	100.0
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	100.0
PRK07067	257	sorbitol dehydrogenase; Provisional	100.0
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	100.0
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	100.0
PRK08226	263	short chain dehydrogenase; Provisional	100.0
PRK08303	305	short chain dehydrogenase; Provisional	100.0
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK09242	257	tropinone reductase; Provisional	100.0
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	100.0
PRK12743	256	oxidoreductase; Provisional	100.0
PRK07677	252	short chain dehydrogenase; Provisional	100.0
PRK06124	256	gluconate 5-dehydrogenase; Provisional	100.0
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07097	265	gluconate 5-dehydrogenase; Provisional	100.0
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	100.0
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	100.0
PRK05717	255	oxidoreductase; Validated	100.0
PRK06940	275	short chain dehydrogenase; Provisional	100.0
PRK06701	290	short chain dehydrogenase; Provisional	100.0
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	100.0
PRK07890	258	short chain dehydrogenase; Provisional	100.0
PRK06949	258	short chain dehydrogenase; Provisional	100.0
PRK06483	236	dihydromonapterin reductase; Provisional	100.0
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	100.0
PRK06500	249	short chain dehydrogenase; Provisional	100.0
PRK12938	246	acetyacetyl-CoA reductase; Provisional	100.0
PRK07576	264	short chain dehydrogenase; Provisional	100.0
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06057	255	short chain dehydrogenase; Provisional	100.0
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK08278	273	short chain dehydrogenase; Provisional	100.0
PRK08628	258	short chain dehydrogenase; Provisional	100.0
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	100.0
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK12939	250	short chain dehydrogenase; Provisional	100.0
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
TIGR02415	254	23BDH acetoin reductases. One member of this famil	100.0
PRK05872	296	short chain dehydrogenase; Provisional	100.0
PRK12742	237	oxidoreductase; Provisional	100.0
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	100.0
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	100.0
PRK08213	259	gluconate 5-dehydrogenase; Provisional	100.0
PRK07814	263	short chain dehydrogenase; Provisional	100.0
PRK09186	256	flagellin modification protein A; Provisional	100.0
PRK12937	245	short chain dehydrogenase; Provisional	100.0
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	100.0
PRK07069	251	short chain dehydrogenase; Validated	100.0
PRK06138	252	short chain dehydrogenase; Provisional	100.0
PRK06484	520	short chain dehydrogenase; Validated	100.0
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	100.0
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	100.0
PRK12744	257	short chain dehydrogenase; Provisional	100.0
PRK05884	223	short chain dehydrogenase; Provisional	100.0
PRK05875	276	short chain dehydrogenase; Provisional	100.0
PRK08703	239	short chain dehydrogenase; Provisional	100.0
PRK06947	248	glucose-1-dehydrogenase; Provisional	100.0
PRK06139	330	short chain dehydrogenase; Provisional	100.0
PRK08862	227	short chain dehydrogenase; Provisional	100.0
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	100.0
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	100.0
PRK12935	247	acetoacetyl-CoA reductase; Provisional	100.0
PRK06123	248	short chain dehydrogenase; Provisional	100.0
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	100.0
PRK12824	245	acetoacetyl-CoA reductase; Provisional	100.0
PRK05599	246	hypothetical protein; Provisional	100.0
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK07774	250	short chain dehydrogenase; Provisional	100.0
PRK07060	245	short chain dehydrogenase; Provisional	100.0
PRK12746	254	short chain dehydrogenase; Provisional	100.0
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	100.0
PRK07074	257	short chain dehydrogenase; Provisional	100.0
PRK06198	260	short chain dehydrogenase; Provisional	100.0
PRK07109	334	short chain dehydrogenase; Provisional	100.0
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK05876	275	short chain dehydrogenase; Provisional	100.0
PRK06182	273	short chain dehydrogenase; Validated	100.0
PRK09134	258	short chain dehydrogenase; Provisional	100.0
PRK12828	239	short chain dehydrogenase; Provisional	100.0
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK12827	249	short chain dehydrogenase; Provisional	100.0
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	100.0
PRK07825	273	short chain dehydrogenase; Provisional	100.0
PRK07577	234	short chain dehydrogenase; Provisional	100.0
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	100.0
PRK12829	264	short chain dehydrogenase; Provisional	100.0
PRK09009	235	C factor cell-cell signaling protein; Provisional	100.0
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PLN00015	308	protochlorophyllide reductase	100.0
PRK07832	272	short chain dehydrogenase; Provisional	100.0
PRK08263	275	short chain dehydrogenase; Provisional	100.0
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	100.0
PRK06180	277	short chain dehydrogenase; Provisional	100.0
PRK08324	681	short chain dehydrogenase; Validated	100.0
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK06924	251	short chain dehydrogenase; Provisional	100.0
PRK05866	293	short chain dehydrogenase; Provisional	100.0
PRK07454	241	short chain dehydrogenase; Provisional	100.0
PRK05993	277	short chain dehydrogenase; Provisional	100.0
PRK07024	257	short chain dehydrogenase; Provisional	100.0
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	100.0
PRK06196	315	oxidoreductase; Provisional	100.0
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07041	230	short chain dehydrogenase; Provisional	100.0
PRK10538	248	malonic semialdehyde reductase; Provisional	100.0
PRK06914	280	short chain dehydrogenase; Provisional	100.0
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	100.0
PLN02780	320	ketoreductase/ oxidoreductase	100.0
PRK06179	270	short chain dehydrogenase; Provisional	100.0
PRK05855	582	short chain dehydrogenase; Validated	100.0
PRK05650	270	short chain dehydrogenase; Provisional	100.0
PRK06194	287	hypothetical protein; Provisional	100.0
PRK07775	274	short chain dehydrogenase; Provisional	100.0
PRK09135	249	pteridine reductase; Provisional	100.0
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK09072	263	short chain dehydrogenase; Provisional	100.0
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	100.0
COG1028	251	FabG Dehydrogenases with different specificities (	100.0
PRK07904	253	short chain dehydrogenase; Provisional	100.0
PRK07806	248	short chain dehydrogenase; Provisional	100.0
PRK08267	260	short chain dehydrogenase; Provisional	100.0
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	100.0
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	100.0
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	100.0
PRK06197	306	short chain dehydrogenase; Provisional	100.0
KOG1611	249	consensus Predicted short chain-type dehydrogenase	100.0
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK08251	248	short chain dehydrogenase; Provisional	100.0
PRK06482	276	short chain dehydrogenase; Provisional	100.0
PRK07578	199	short chain dehydrogenase; Provisional	100.0
PRK05854	313	short chain dehydrogenase; Provisional	100.0
PRK07102	243	short chain dehydrogenase; Provisional	100.0
PRK05693	274	short chain dehydrogenase; Provisional	100.0
PRK06181	263	short chain dehydrogenase; Provisional	100.0
PRK07023	243	short chain dehydrogenase; Provisional	99.98
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	99.98
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	99.98
PRK07326	237	short chain dehydrogenase; Provisional	99.98
PRK07453	322	protochlorophyllide oxidoreductase; Validated	99.97
PRK06101	240	short chain dehydrogenase; Provisional	99.97
PRK07201	657	short chain dehydrogenase; Provisional	99.97
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	99.97
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	99.97
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	99.97
PRK08177	225	short chain dehydrogenase; Provisional	99.97
PRK08264	238	short chain dehydrogenase; Validated	99.97
KOG1208	314	consensus Dehydrogenases with different specificit	99.97
PRK12367	245	short chain dehydrogenase; Provisional	99.97
PRK08017	256	oxidoreductase; Provisional	99.97
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.97
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	99.96
PRK06953	222	short chain dehydrogenase; Provisional	99.96
PRK09291	257	short chain dehydrogenase; Provisional	99.96
PRK08219	227	short chain dehydrogenase; Provisional	99.96
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	99.96
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.94
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.92
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.9
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.9
PLN03209	576	translocon at the inner envelope of chloroplast su	99.9
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.87
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.87
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	99.87
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.86
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	99.84
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.84
PLN02653	340	GDP-mannose 4,6-dehydratase	99.83
PLN02572	442	UDP-sulfoquinovose synthase	99.83
PLN02650	351	dihydroflavonol-4-reductase	99.82
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	99.82
PLN02214	342	cinnamoyl-CoA reductase	99.81
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	99.81
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.81
PLN02583	297	cinnamoyl-CoA reductase	99.81
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.8
PLN00198	338	anthocyanidin reductase; Provisional	99.8
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.8
PRK06720	169	hypothetical protein; Provisional	99.79
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.78
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	99.78
PLN02240	352	UDP-glucose 4-epimerase	99.77
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.77
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.76
PLN02686	367	cinnamoyl-CoA reductase	99.76
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.76
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.75
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	99.74
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.74
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.73
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.73
PLN02427	386	UDP-apiose/xylose synthase	99.72
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.72
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	99.72
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.72
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	99.69
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	99.68
PLN02260	668	probable rhamnose biosynthetic enzyme	99.67
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	99.67
PLN02695	370	GDP-D-mannose-3',5'-epimerase	99.66
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.66
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	99.65
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	99.64
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	99.64
PLN02206	442	UDP-glucuronate decarboxylase	99.63
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	99.62
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	99.61
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	99.6
CHL00194	317	ycf39 Ycf39; Provisional	99.6
PLN02166	436	dTDP-glucose 4,6-dehydratase	99.58
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	99.54
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	99.51
PLN02996	491	fatty acyl-CoA reductase	99.51
PRK07201	657	short chain dehydrogenase; Provisional	99.51
PRK05865	854	hypothetical protein; Provisional	99.47
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.47
PF08643	299	DUF1776: Fungal family of unknown function (DUF177	99.4
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	99.39
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.37
PLN02778	298	3,5-epimerase/4-reductase	99.37
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	99.37
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	99.34
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.31
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.3
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	99.28
PRK08309	177	short chain dehydrogenase; Provisional	99.23
PLN02260	668	probable rhamnose biosynthetic enzyme	99.22
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	99.22
PLN02503	605	fatty acyl-CoA reductase 2	99.22
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.21
PLN00016	378	RNA-binding protein; Provisional	99.21
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.17
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	99.14
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	99.12
PRK12320	699	hypothetical protein; Provisional	99.1
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	99.0
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	98.86
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	98.82
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	98.68
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	98.67
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	98.65
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	98.63
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	98.59
COG4982	866	3-oxoacyl-[acyl-carrier protein]	98.57
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	98.55
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	98.5
PRK12548	289	shikimate 5-dehydrogenase; Provisional	98.39
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.37
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.36
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	98.31
COG2910	211	Putative NADH-flavin reductase [General function p	98.24
PLN00106	323	malate dehydrogenase	98.16
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.1
PRK09620	229	hypothetical protein; Provisional	98.1
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	98.06
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	98.01
PTZ00325	321	malate dehydrogenase; Provisional	97.95
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	97.9
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.83
PRK14982	340	acyl-ACP reductase; Provisional	97.79
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	97.76
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	97.72
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	97.7
KOG2774	366	consensus NAD dependent epimerase [General functio	97.61
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	97.6
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	97.5
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	97.46
KOG4288	283	consensus Predicted oxidoreductase [General functi	97.45
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	97.31
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	97.29
PRK05086	312	malate dehydrogenase; Provisional	97.29
KOG2733	423	consensus Uncharacterized membrane protein [Functi	97.28
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	97.28
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	97.19
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.16
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	97.14
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	97.11
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.09
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	97.08
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	97.04
PRK06849	389	hypothetical protein; Provisional	97.01
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	97.0
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	96.9
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	96.88
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	96.87
COG2130	340	Putative NADP-dependent oxidoreductases [General f	96.85
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	96.8
PRK15116	268	sulfur acceptor protein CsdL; Provisional	96.76
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	96.72
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	96.64
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	96.62
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	96.61
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	96.59
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	96.57
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	96.56
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	96.52
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	96.52
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	96.52
PF12242	78	Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2	96.51
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	96.41
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	96.38
PRK13940	414	glutamyl-tRNA reductase; Provisional	96.37
COG0569	225	TrkA K+ transport systems, NAD-binding component [	96.36
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	96.34
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	96.3
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	96.25
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	96.23
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	96.22
COG3268	382	Uncharacterized conserved protein [Function unknow	96.19
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	96.17
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	96.11
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	96.1
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	96.05
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	96.03
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	96.03
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	96.01
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	95.99
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	95.98
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	95.98
PRK05442	326	malate dehydrogenase; Provisional	95.93
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	95.9
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	95.9
PLN00112	444	malate dehydrogenase (NADP); Provisional	95.85
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	95.77
PRK08306	296	dipicolinate synthase subunit A; Reviewed	95.76
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	95.73
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.73
PRK09496	453	trkA potassium transporter peripheral membrane com	95.71
COG3007	398	Uncharacterized paraquat-inducible protein B [Func	95.69
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	95.68
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	95.66
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	95.64
PLN00203	519	glutamyl-tRNA reductase	95.63
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	95.61
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	95.61
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	95.6
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	95.57
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	95.54
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	95.54
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	95.53
PRK04148	134	hypothetical protein; Provisional	95.53
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	95.51
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	95.49
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	95.43
PLN02928	347	oxidoreductase family protein	95.39
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	95.33
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	95.31
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.29
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	95.28
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	95.26
PRK08410	311	2-hydroxyacid dehydrogenase; Provisional	95.23
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	95.23
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	95.21
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	95.19
PRK12480	330	D-lactate dehydrogenase; Provisional	95.19
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	95.15
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	95.1
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	95.1
COG1052	324	LdhA Lactate dehydrogenase and related dehydrogena	95.08
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	95.07
PRK11790	409	D-3-phosphoglycerate dehydrogenase; Provisional	95.07
PRK14968	188	putative methyltransferase; Provisional	95.06
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	95.04
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	95.01
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.0
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	95.0
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	94.95
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	94.95
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	94.95
PLN02306	386	hydroxypyruvate reductase	94.93
PRK13243	333	glyoxylate reductase; Reviewed	94.91
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	94.9
PRK06932	314	glycerate dehydrogenase; Provisional	94.89
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	94.86
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	94.85
COG0111	324	SerA Phosphoglycerate dehydrogenase and related de	94.8
PLN02586	360	probable cinnamyl alcohol dehydrogenase	94.71
KOG1196	343	consensus Predicted NAD-dependent oxidoreductase [	94.7
TIGR01751	398	crot-CoA-red crotonyl-CoA reductase. The enzyme mo	94.66
PRK06487	317	glycerate dehydrogenase; Provisional	94.64
PRK08328	231	hypothetical protein; Provisional	94.59
PRK04308	445	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	94.55
PTZ00354	334	alcohol dehydrogenase; Provisional	94.47
PRK14874	334	aspartate-semialdehyde dehydrogenase; Provisional	94.46
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	94.46
PLN02740	381	Alcohol dehydrogenase-like	94.45
COG1063	350	Tdh Threonine dehydrogenase and related Zn-depende	94.45
PRK10309	347	galactitol-1-phosphate dehydrogenase; Provisional	94.44
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	94.43
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	94.39
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	94.37
PRK06436	303	glycerate dehydrogenase; Provisional	94.36
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	94.35
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	94.3
cd08246	393	crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-	94.28
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	94.28
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	94.27
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	94.25
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	94.24
PRK09496	453	trkA potassium transporter peripheral membrane com	94.19
PLN02178	375	cinnamyl-alcohol dehydrogenase	94.18
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	94.16
PRK07574	385	formate dehydrogenase; Provisional	94.13
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	94.1
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	94.1
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.1
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	94.09
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.08
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	94.07
PLN02494	477	adenosylhomocysteinase	94.07
PRK13403	335	ketol-acid reductoisomerase; Provisional	94.06
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	94.04
PRK06719	157	precorrin-2 dehydrogenase; Validated	94.04
PLN03139	386	formate dehydrogenase; Provisional	94.02
cd05191	86	NAD_bind_amino_acid_DH NAD(P) binding domain of am	93.97
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	93.94
PRK15438	378	erythronate-4-phosphate dehydrogenase PdxB; Provis	93.92
PRK15409	323	bifunctional glyoxylate/hydroxypyruvate reductase	93.91
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	93.91
cd08233	351	butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog	93.8
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	93.79
PRK10669	558	putative cation:proton antiport protein; Provision	93.73
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	93.72
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	93.71
KOG0024	354	consensus Sorbitol dehydrogenase [Secondary metabo	93.54
PLN02968	381	Probable N-acetyl-gamma-glutamyl-phosphate reducta	93.54
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	93.49
PRK05479	330	ketol-acid reductoisomerase; Provisional	93.48
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	93.33
cd01489	312	Uba2_SUMO Ubiquitin activating enzyme (E1) subunit	93.33
PRK00257	381	erythronate-4-phosphate dehydrogenase; Validated	93.31
PTZ00075	476	Adenosylhomocysteinase; Provisional	93.3
PF01262	168	AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal	93.3
PRK13581	526	D-3-phosphoglycerate dehydrogenase; Provisional	93.29
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	93.27
PRK08655	437	prephenate dehydrogenase; Provisional	93.23
PLN02827	378	Alcohol dehydrogenase-like	93.2
COG0027	394	PurT Formate-dependent phosphoribosylglycinamide f	93.17
PTZ00082	321	L-lactate dehydrogenase; Provisional	93.17
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	93.16
TIGR01757	387	Malate-DH_plant malate dehydrogenase, NADP-depende	93.14
PTZ00117	319	malate dehydrogenase; Provisional	93.14
PF00107	130	ADH_zinc_N: Zinc-binding dehydrogenase; InterPro:	93.12
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	93.09
PRK08223	287	hypothetical protein; Validated	93.09

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=100.00  E-value=1.7e-46  Score=300.61  Aligned_cols=242  Identities=35%  Similarity=0.541  Sum_probs=213.7

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCC-CCeEEEEecCCCHHHHHHHHHHHHHhcCC
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAP-APVTFVHCDVSLEEDIENLINSTVSRYGR  106 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~i~~~~~~~~~~~g~  106 (305)
                      ++..|.++||||++|||++++..|++.|++|++.+++....+.....+.+ .+...+.||+++.++++..+++..+.+|.
T Consensus        11 r~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~   90 (256)
T KOG1200|consen   11 RLMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGT   90 (256)
T ss_pred             HHhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCC
Confidence            45678999999999999999999999999999999988777777666655 35667899999999999999999999999


Q ss_pred             ccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHc--CCCCEEEEecccccccCCCCCccchh
Q 021960          107 LDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMIN--RGGGCIISTASVAGVMGGLGPHAYTA  184 (305)
Q Consensus       107 id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~~~iv~isS~~~~~~~~~~~~Y~~  184 (305)
                      +++||||||+...    ..+..+..++|+..+.+|+.+.|+.+|++.+.|..  +++.+||++||+.+..+.-++..|++
T Consensus        91 psvlVncAGItrD----~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN~GQtnYAA  166 (256)
T KOG1200|consen   91 PSVLVNCAGITRD----GLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGNFGQTNYAA  166 (256)
T ss_pred             CcEEEEcCccccc----cceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhcccccccchhhhh
Confidence            9999999999754    56778899999999999999999999999998543  34569999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCC
Q 021960          185 SKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT  264 (305)
Q Consensus       185 sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (305)
                      +|+++.+|+|+.|+|++++|||||+|+||+|.|||..+.-+                   +...++   ..  ..|.|++
T Consensus       167 sK~GvIgftktaArEla~knIrvN~VlPGFI~tpMT~~mp~-------------------~v~~ki---~~--~iPmgr~  222 (256)
T KOG1200|consen  167 SKGGVIGFTKTAARELARKNIRVNVVLPGFIATPMTEAMPP-------------------KVLDKI---LG--MIPMGRL  222 (256)
T ss_pred             hcCceeeeeHHHHHHHhhcCceEeEeccccccChhhhhcCH-------------------HHHHHH---Hc--cCCcccc
Confidence            99999999999999999999999999999999999765422                   122222   22  4799999


Q ss_pred             CCHHHHHHHHHHhccCCCCceeccEEEecCCcc
Q 021960          265 LRSKDIAEAALYLASDESRYVSGHNLVVDGGVT  297 (305)
Q Consensus       265 ~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~  297 (305)
                      +.+||||..++||+|+.+.|+||+.+.++||+.
T Consensus       223 G~~EevA~~V~fLAS~~ssYiTG~t~evtGGl~  255 (256)
T KOG1200|consen  223 GEAEEVANLVLFLASDASSYITGTTLEVTGGLA  255 (256)
T ss_pred             CCHHHHHHHHHHHhccccccccceeEEEecccc
Confidence            999999999999999999999999999999975

>PRK08339 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.4e-45  Score=323.25  Aligned_cols=255  Identities=23%  Similarity=0.318  Sum_probs=213.6

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc---CCCCeEEEEecCCCHHHHHHHHHHHHHh
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL---APAPVTFVHCDVSLEEDIENLINSTVSR  103 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~---~~~~v~~~~~D~~d~~~i~~~~~~~~~~  103 (305)
                      .++++|++|||||++|||+++|+.|+++|++|++++|+....+...+.+   .+.++.++.+|++|.++++++++++. .
T Consensus         4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~-~   82 (263)
T PRK08339          4 IDLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELK-N   82 (263)
T ss_pred             cCCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHH-h
Confidence            4678999999999999999999999999999999999876655444333   24568899999999999999999985 5


Q ss_pred             cCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccch
Q 021960          104 YGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYT  183 (305)
Q Consensus       104 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~  183 (305)
                      +|++|++|||||....    .++.+.+.++|++.+++|+.++++++++++|.|.+++.|+||++||.++..+.++...|+
T Consensus        83 ~g~iD~lv~nag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~~~~~~~~y~  158 (263)
T PRK08339         83 IGEPDIFFFSTGGPKP----GYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKEPIPNIALSN  158 (263)
T ss_pred             hCCCcEEEECCCCCCC----CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccCCCCcchhhH
Confidence            8899999999997533    567788999999999999999999999999999888889999999999999989999999


Q ss_pred             hhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCC
Q 021960          184 ASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGT  263 (305)
Q Consensus       184 ~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (305)
                      ++|+|+++|+++++.|++++||+||+|+||+++|+|........        ....+.+.++..+.   +..  ..|.++
T Consensus       159 asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~--------~~~~~~~~~~~~~~---~~~--~~p~~r  225 (263)
T PRK08339        159 VVRISMAGLVRTLAKELGPKGITVNGIMPGIIRTDRVIQLAQDR--------AKREGKSVEEALQE---YAK--PIPLGR  225 (263)
T ss_pred             HHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccHHHHHHHHhh--------hhccCCCHHHHHHH---Hhc--cCCccc
Confidence            99999999999999999999999999999999999864432110        00011111222111   111  357789


Q ss_pred             CCCHHHHHHHHHHhccCCCCceeccEEEecCCcccc
Q 021960          264 TLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTS  299 (305)
Q Consensus       264 ~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~  299 (305)
                      +.+|+|+|+.+.||+++.++++||+++.+|||+.++
T Consensus       226 ~~~p~dva~~v~fL~s~~~~~itG~~~~vdgG~~~~  261 (263)
T PRK08339        226 LGEPEEIGYLVAFLASDLGSYINGAMIPVDGGRLNS  261 (263)
T ss_pred             CcCHHHHHHHHHHHhcchhcCccCceEEECCCcccc
Confidence            999999999999999999999999999999998765

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=3.2e-45  Score=320.47  Aligned_cols=247  Identities=23%  Similarity=0.286  Sum_probs=207.2

Q ss_pred             CCCCCCEEEEecCC--CchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           27 RRLEGKVAIITGGA--RGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        27 ~~l~~k~vlVtGas--~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      ..+++|++|||||+  +|||+++|+.|+++|++|++++|++...+.+ +.+...++.++.+|++|.++++++++++.+++
T Consensus         3 ~~l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~~~~~~~-~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   81 (252)
T PRK06079          3 GILSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDRMKKSL-QKLVDEEDLLVECDVASDESIERAFATIKERV   81 (252)
T ss_pred             cccCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCchHHHHHH-HhhccCceeEEeCCCCCHHHHHHHHHHHHHHh
Confidence            35789999999999  8999999999999999999999874333322 22333458889999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchh
Q 021960          105 GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTA  184 (305)
Q Consensus       105 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~  184 (305)
                      +++|+||||||.........++.+.+.++|++.+++|+.+++++++.++|.|.+  .|+||++||.++..+.+++..|++
T Consensus        82 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~--~g~Iv~iss~~~~~~~~~~~~Y~a  159 (252)
T PRK06079         82 GKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNP--GASIVTLTYFGSERAIPNYNVMGI  159 (252)
T ss_pred             CCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhccc--CceEEEEeccCccccCCcchhhHH
Confidence            999999999997643212256778899999999999999999999999999853  589999999999988889999999


Q ss_pred             hHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCC
Q 021960          185 SKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT  264 (305)
Q Consensus       185 sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (305)
                      +|+|+++|+++++.|++++||+||+|+||+++|+|......                 .++..+.   +..  ..|.+++
T Consensus       160 sKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~~~~-----------------~~~~~~~---~~~--~~p~~r~  217 (252)
T PRK06079        160 AKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGIKG-----------------HKDLLKE---SDS--RTVDGVG  217 (252)
T ss_pred             HHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccccccCCC-----------------hHHHHHH---HHh--cCcccCC
Confidence            99999999999999999999999999999999997532210                 0111111   111  2567899


Q ss_pred             CCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          265 LRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       265 ~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      .+|+|||+.+.||+++.++++||+++.+|||+++
T Consensus       218 ~~pedva~~~~~l~s~~~~~itG~~i~vdgg~~~  251 (252)
T PRK06079        218 VTIEEVGNTAAFLLSDLSTGVTGDIIYVDKGVHL  251 (252)
T ss_pred             CCHHHHHHHHHHHhCcccccccccEEEeCCceec
Confidence            9999999999999999999999999999999765

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=3e-44  Score=314.16  Aligned_cols=244  Identities=32%  Similarity=0.504  Sum_probs=206.2

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRL  107 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~i  107 (305)
                      ++++|++|||||++|||+++|+.|+++|++|++++|+............+.++.++.+|++|.++++++++++.+.++++
T Consensus         5 ~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i   84 (251)
T PRK12481          5 DLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHI   84 (251)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCC
Confidence            57899999999999999999999999999999988864321111111124568899999999999999999999999999


Q ss_pred             cEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-CCEEEEecccccccCCCCCccchhhH
Q 021960          108 DILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRG-GGCIISTASVAGVMGGLGPHAYTASK  186 (305)
Q Consensus       108 d~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sK  186 (305)
                      |+||||||....    .++.+.+.++|++.+++|+.+++.+++.+++.|.+++ +|+||++||.++..+.++...|++||
T Consensus        85 D~lv~~ag~~~~----~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~asK  160 (251)
T PRK12481         85 DILINNAGIIRR----QDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIRVPSYTASK  160 (251)
T ss_pred             CEEEECCCcCCC----CCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCCCCCcchHHHH
Confidence            999999997643    4677889999999999999999999999999997665 58999999999999888899999999


Q ss_pred             HHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCC
Q 021960          187 HAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLR  266 (305)
Q Consensus       187 aa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (305)
                      +++++|+++++.|++++||+||+|+||+++|++.......                 +...+..   ..  ..|.+++.+
T Consensus       161 ~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~~~~-----------------~~~~~~~---~~--~~p~~~~~~  218 (251)
T PRK12481        161 SAVMGLTRALATELSQYNINVNAIAPGYMATDNTAALRAD-----------------TARNEAI---LE--RIPASRWGT  218 (251)
T ss_pred             HHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhcccC-----------------hHHHHHH---Hh--cCCCCCCcC
Confidence            9999999999999999999999999999999986432110                 0111111   11  256788999


Q ss_pred             HHHHHHHHHHhccCCCCceeccEEEecCCcc
Q 021960          267 SKDIAEAALYLASDESRYVSGHNLVVDGGVT  297 (305)
Q Consensus       267 ~~dva~~v~~l~s~~~~~~tG~~i~idgG~~  297 (305)
                      |+|+|+.+.||+++.+++++|++|.+|||+.
T Consensus       219 peeva~~~~~L~s~~~~~~~G~~i~vdgg~~  249 (251)
T PRK12481        219 PDDLAGPAIFLSSSASDYVTGYTLAVDGGWL  249 (251)
T ss_pred             HHHHHHHHHHHhCccccCcCCceEEECCCEe
Confidence            9999999999999999999999999999974

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.8e-44  Score=317.71  Aligned_cols=248  Identities=21%  Similarity=0.277  Sum_probs=202.6

Q ss_pred             CCCCCEEEEecCCC--chHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcC-CCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           28 RLEGKVAIITGGAR--GIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLA-PAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        28 ~l~~k~vlVtGas~--giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~-~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      .|++|++|||||++  |||+++|+.|+++|++|++++|++...+...+... .....++.+|++|.++++++++++.+++
T Consensus         4 ~l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~   83 (271)
T PRK06505          4 LMQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKW   83 (271)
T ss_pred             ccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHh
Confidence            46899999999997  99999999999999999999887533222222111 1123578999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchh
Q 021960          105 GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTA  184 (305)
Q Consensus       105 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~  184 (305)
                      |++|+||||||.........++.+.+.++|++.+++|+.++++++++++|.|.+  +|+||++||.++..+.+++..|++
T Consensus        84 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~--~G~Iv~isS~~~~~~~~~~~~Y~a  161 (271)
T PRK06505         84 GKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPD--GGSMLTLTYGGSTRVMPNYNVMGV  161 (271)
T ss_pred             CCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhcc--CceEEEEcCCCccccCCccchhhh
Confidence            999999999997532111145678899999999999999999999999999963  489999999999988899999999


Q ss_pred             hHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCC
Q 021960          185 SKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT  264 (305)
Q Consensus       185 sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (305)
                      +|+|+.+|+|+|+.|++++||+||+|+||+++|+|..... .                 ...   ....... ..|.+++
T Consensus       162 sKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~~~-~-----------------~~~---~~~~~~~-~~p~~r~  219 (271)
T PRK06505        162 AKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAGIG-D-----------------ARA---IFSYQQR-NSPLRRT  219 (271)
T ss_pred             hHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccccccCc-c-----------------hHH---HHHHHhh-cCCcccc
Confidence            9999999999999999999999999999999999742210 0                 000   0011111 2467888


Q ss_pred             CCHHHHHHHHHHhccCCCCceeccEEEecCCcccc
Q 021960          265 LRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTS  299 (305)
Q Consensus       265 ~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~  299 (305)
                      .+|||+|+.++||+++.++++||++|.+|||+...
T Consensus       220 ~~peeva~~~~fL~s~~~~~itG~~i~vdgG~~~~  254 (271)
T PRK06505        220 VTIDEVGGSALYLLSDLSSGVTGEIHFVDSGYNIV  254 (271)
T ss_pred             CCHHHHHHHHHHHhCccccccCceEEeecCCcccC
Confidence            99999999999999999999999999999997643

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1e-43  Score=312.39  Aligned_cols=248  Identities=22%  Similarity=0.251  Sum_probs=202.3

Q ss_pred             CCCCCEEEEecCCC--chHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCC-CCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           28 RLEGKVAIITGGAR--GIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAP-APVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        28 ~l~~k~vlVtGas~--giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      .+++|++|||||++  |||+++|+.|+++|++|++++|++...+.+.+.... ....++.+|++|.++++++++++.+++
T Consensus         5 ~~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~   84 (260)
T PRK06603          5 LLQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKW   84 (260)
T ss_pred             ccCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHc
Confidence            56899999999997  999999999999999999988874322222221111 123467899999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchh
Q 021960          105 GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTA  184 (305)
Q Consensus       105 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~  184 (305)
                      |++|+||||||.........++.+.+.++|++.+++|+.+++.+++.+.|.|.+  +|+||++||..+..+.+++..|++
T Consensus        85 g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~--~G~Iv~isS~~~~~~~~~~~~Y~a  162 (260)
T PRK06603         85 GSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHD--GGSIVTLTYYGAEKVIPNYNVMGV  162 (260)
T ss_pred             CCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhcc--CceEEEEecCccccCCCcccchhh
Confidence            999999999997532111245778899999999999999999999999999953  589999999999888889999999


Q ss_pred             hHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCC
Q 021960          185 SKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT  264 (305)
Q Consensus       185 sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (305)
                      ||+|+++|+++++.|++++||+||+|+||+++|+|.... ..                .++..+...   .  ..|.+++
T Consensus       163 sKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~-~~----------------~~~~~~~~~---~--~~p~~r~  220 (260)
T PRK06603        163 AKAALEASVKYLANDMGENNIRVNAISAGPIKTLASSAI-GD----------------FSTMLKSHA---A--TAPLKRN  220 (260)
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhcC-CC----------------cHHHHHHHH---h--cCCcCCC
Confidence            999999999999999999999999999999999974211 00                011111111   1  2467888


Q ss_pred             CCHHHHHHHHHHhccCCCCceeccEEEecCCcccc
Q 021960          265 LRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTS  299 (305)
Q Consensus       265 ~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~  299 (305)
                      .+|+|+|+.+.||+|+.++++||++|.+|||+.+.
T Consensus       221 ~~pedva~~~~~L~s~~~~~itG~~i~vdgG~~~~  255 (260)
T PRK06603        221 TTQEDVGGAAVYLFSELSKGVTGEIHYVDCGYNIM  255 (260)
T ss_pred             CCHHHHHHHHHHHhCcccccCcceEEEeCCccccc
Confidence            99999999999999999999999999999998663

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.2e-43  Score=311.51  Aligned_cols=247  Identities=23%  Similarity=0.321  Sum_probs=204.7

Q ss_pred             CCCCCCEEEEecCC--CchHHHHHHHHHHcCCeEEEEecCcchhh---hHhhhcCCCCeEEEEecCCCHHHHHHHHHHHH
Q 021960           27 RRLEGKVAIITGGA--RGIGEAAVRLFARHGAKVVIADVEDTLGS---VLASTLAPAPVTFVHCDVSLEEDIENLINSTV  101 (305)
Q Consensus        27 ~~l~~k~vlVtGas--~giG~~ia~~l~~~g~~vv~~~r~~~~~~---~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~  101 (305)
                      .+++||++|||||+  +|||+++|++|+++|++|++++|++...+   .+.+..  ..+.++.||++|.++++++++++.
T Consensus         6 ~~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~   83 (258)
T PRK07533          6 LPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEEL--DAPIFLPLDVREPGQLEAVFARIA   83 (258)
T ss_pred             cccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhh--ccceEEecCcCCHHHHHHHHHHHH
Confidence            35789999999998  59999999999999999999998754322   222222  235678999999999999999999


Q ss_pred             HhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCcc
Q 021960          102 SRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHA  181 (305)
Q Consensus       102 ~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~  181 (305)
                      +++|++|++|||||.........++.+.+.++|++.+++|+.+++++++.++|.|.  ..|+||++||..+..+.+++..
T Consensus        84 ~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~--~~g~Ii~iss~~~~~~~~~~~~  161 (258)
T PRK07533         84 EEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMT--NGGSLLTMSYYGAEKVVENYNL  161 (258)
T ss_pred             HHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhc--cCCEEEEEeccccccCCccchh
Confidence            99999999999999754322224677889999999999999999999999999994  3589999999999888888999


Q ss_pred             chhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCC
Q 021960          182 YTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLK  261 (305)
Q Consensus       182 Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (305)
                      |+++|+|+++|+++++.|++++||+||+|+||+++|+|.... ..                .++..+.   +..  ..|.
T Consensus       162 Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~~-~~----------------~~~~~~~---~~~--~~p~  219 (258)
T PRK07533        162 MGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGI-DD----------------FDALLED---AAE--RAPL  219 (258)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhcc-CC----------------cHHHHHH---HHh--cCCc
Confidence            999999999999999999999999999999999999985321 10                0111111   111  2567


Q ss_pred             CCCCCHHHHHHHHHHhccCCCCceeccEEEecCCcccc
Q 021960          262 GTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTS  299 (305)
Q Consensus       262 ~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~  299 (305)
                      +++.+|+|+|+.++||++++++++||+++.+|||+++.
T Consensus       220 ~r~~~p~dva~~~~~L~s~~~~~itG~~i~vdgg~~~~  257 (258)
T PRK07533        220 RRLVDIDDVGAVAAFLASDAARRLTGNTLYIDGGYHIV  257 (258)
T ss_pred             CCCCCHHHHHHHHHHHhChhhccccCcEEeeCCccccc
Confidence            88999999999999999999999999999999997643

>PRK07063 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1e-43  Score=312.06  Aligned_cols=250  Identities=30%  Similarity=0.468  Sum_probs=212.6

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc----CCCCeEEEEecCCCHHHHHHHHHHHHH
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL----APAPVTFVHCDVSLEEDIENLINSTVS  102 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~----~~~~v~~~~~D~~d~~~i~~~~~~~~~  102 (305)
                      .++++|++|||||++|||+++++.|+++|++|++++|+....+...+.+    .+.++.++.+|++|.++++++++++.+
T Consensus         3 ~~l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   82 (260)
T PRK07063          3 NRLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEE   82 (260)
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999876655544433    245688999999999999999999999


Q ss_pred             hcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccc
Q 021960          103 RYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAY  182 (305)
Q Consensus       103 ~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y  182 (305)
                      .++++|+||||||....    .++.+.+.++|++.+++|+.++++++++++|.|.+++.++||++||..+..+.++...|
T Consensus        83 ~~g~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  158 (260)
T PRK07063         83 AFGPLDVLVNNAGINVF----ADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKIIPGCFPY  158 (260)
T ss_pred             HhCCCcEEEECCCcCCC----CChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccCCCCchHH
Confidence            99999999999997533    34557788999999999999999999999999988878999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCC
Q 021960          183 TASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKG  262 (305)
Q Consensus       183 ~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (305)
                      +++|+++++|+++++.|++++||+||+|+||+++|++..+.+....+.             +...+..   ..  ..+.+
T Consensus       159 ~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~-------------~~~~~~~---~~--~~~~~  220 (260)
T PRK07063        159 PVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWNAQPDP-------------AAARAET---LA--LQPMK  220 (260)
T ss_pred             HHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhhhhccCCh-------------HHHHHHH---Hh--cCCCC
Confidence            999999999999999999999999999999999999865443221100             0111111   11  25678


Q ss_pred             CCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          263 TTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       263 ~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      ++.+|+|+|+.++||+++.++++||++|.+|||++.
T Consensus       221 r~~~~~~va~~~~fl~s~~~~~itG~~i~vdgg~~~  256 (260)
T PRK07063        221 RIGRPEEVAMTAVFLASDEAPFINATCITIDGGRSV  256 (260)
T ss_pred             CCCCHHHHHHHHHHHcCccccccCCcEEEECCCeee
Confidence            899999999999999999999999999999999764

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=7.5e-44  Score=315.36  Aligned_cols=245  Identities=20%  Similarity=0.285  Sum_probs=201.9

Q ss_pred             CCCCCEEEEecCC--CchHHHHHHHHHHcCCeEEEEecCcch---hhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHH
Q 021960           28 RLEGKVAIITGGA--RGIGEAAVRLFARHGAKVVIADVEDTL---GSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVS  102 (305)
Q Consensus        28 ~l~~k~vlVtGas--~giG~~ia~~l~~~g~~vv~~~r~~~~---~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~  102 (305)
                      .+++|++|||||+  +|||+++|+.|+++|++|++++|++..   .+.+.+... .. .++.+|++|.++++++++++.+
T Consensus         2 ~l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~-~~-~~~~~Dv~d~~~v~~~~~~i~~   79 (274)
T PRK08415          2 IMKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELG-SD-YVYELDVSKPEHFKSLAESLKK   79 (274)
T ss_pred             ccCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcC-Cc-eEEEecCCCHHHHHHHHHHHHH
Confidence            4579999999997  899999999999999999999887532   222222222 23 5789999999999999999999


Q ss_pred             hcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccc
Q 021960          103 RYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAY  182 (305)
Q Consensus       103 ~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y  182 (305)
                      ++|++|+||||||.........++.+.+.++|++.+++|+.+++++++.++|.|.+  .|+||++||.++..+.+++..|
T Consensus        80 ~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~--~g~Iv~isS~~~~~~~~~~~~Y  157 (274)
T PRK08415         80 DLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLND--GASVLTLSYLGGVKYVPHYNVM  157 (274)
T ss_pred             HcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhcc--CCcEEEEecCCCccCCCcchhh
Confidence            99999999999997532111246778899999999999999999999999999954  4899999999999888899999


Q ss_pred             hhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCC
Q 021960          183 TASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKG  262 (305)
Q Consensus       183 ~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (305)
                      ++||+|+.+|+++++.|++++||+||+|+||+++|++.... ..                 ....   ..+.. ...|.+
T Consensus       158 ~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~-~~-----------------~~~~---~~~~~-~~~pl~  215 (274)
T PRK08415        158 GVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASGI-GD-----------------FRMI---LKWNE-INAPLK  215 (274)
T ss_pred             hhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhcc-ch-----------------hhHH---hhhhh-hhCchh
Confidence            99999999999999999999999999999999999874321 00                 0000   01111 124678


Q ss_pred             CCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          263 TTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       263 ~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      ++.+|+|+|+.++||+++.++++||+++.+|||+..
T Consensus       216 r~~~pedva~~v~fL~s~~~~~itG~~i~vdGG~~~  251 (274)
T PRK08415        216 KNVSIEEVGNSGMYLLSDLSSGVTGEIHYVDAGYNI  251 (274)
T ss_pred             ccCCHHHHHHHHHHHhhhhhhcccccEEEEcCcccc
Confidence            889999999999999999999999999999999764

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.4e-43  Score=309.42  Aligned_cols=248  Identities=23%  Similarity=0.295  Sum_probs=205.6

Q ss_pred             CCCCCCEEEEecCC--CchHHHHHHHHHHcCCeEEEEecCcc---hhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHH
Q 021960           27 RRLEGKVAIITGGA--RGIGEAAVRLFARHGAKVVIADVEDT---LGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTV  101 (305)
Q Consensus        27 ~~l~~k~vlVtGas--~giG~~ia~~l~~~g~~vv~~~r~~~---~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~  101 (305)
                      .++++|++|||||+  +|||+++|+.|+++|++|++++|+..   ..+.+.+...+.++.++.+|++|.++++++++++.
T Consensus         3 ~~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   82 (257)
T PRK08594          3 LSLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIK   82 (257)
T ss_pred             cccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHH
Confidence            35789999999997  89999999999999999999877532   23333333334568899999999999999999999


Q ss_pred             HhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCcc
Q 021960          102 SRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHA  181 (305)
Q Consensus       102 ~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~  181 (305)
                      +++|++|++|||||.........++.+.+.++|++.+++|+.+++++++.++|.|.+  +|+||++||..+..+.++...
T Consensus        83 ~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~g~Iv~isS~~~~~~~~~~~~  160 (257)
T PRK08594         83 EEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTE--GGSIVTLTYLGGERVVQNYNV  160 (257)
T ss_pred             HhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhccc--CceEEEEcccCCccCCCCCch
Confidence            999999999999997542212246678899999999999999999999999999854  589999999999999889999


Q ss_pred             chhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCC
Q 021960          182 YTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLK  261 (305)
Q Consensus       182 Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (305)
                      |+++|+|+++|+++++.|++++||+||+|+||+++|++.... ..                .++..+.+.   .  ..|.
T Consensus       161 Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~-~~----------------~~~~~~~~~---~--~~p~  218 (257)
T PRK08594        161 MGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKGV-GG----------------FNSILKEIE---E--RAPL  218 (257)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhhh-cc----------------ccHHHHHHh---h--cCCc
Confidence            999999999999999999999999999999999999974321 00                001111111   1  2467


Q ss_pred             CCCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          262 GTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       262 ~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      +++.+|+|+|+.++||+++.++++||+++.+|||+.+
T Consensus       219 ~r~~~p~~va~~~~~l~s~~~~~~tG~~~~~dgg~~~  255 (257)
T PRK08594        219 RRTTTQEEVGDTAAFLFSDLSRGVTGENIHVDSGYHI  255 (257)
T ss_pred             cccCCHHHHHHHHHHHcCcccccccceEEEECCchhc
Confidence            8889999999999999999999999999999999764

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.2e-43  Score=310.45  Aligned_cols=248  Identities=21%  Similarity=0.251  Sum_probs=201.7

Q ss_pred             CCCCCEEEEecC--CCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcC-CCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           28 RLEGKVAIITGG--ARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLA-PAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        28 ~l~~k~vlVtGa--s~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~-~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      .+++|++|||||  ++|||+++|+.|+++|++|++++|.+...+.+.+... ......+.||++|.++++++++++.+++
T Consensus         3 ~~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   82 (261)
T PRK08690          3 FLQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHW   82 (261)
T ss_pred             ccCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHh
Confidence            468999999997  6799999999999999999998775432222222211 1234578999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCCc-ccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccch
Q 021960          105 GRLDILYNNAGVLGNQRKHKS-IIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYT  183 (305)
Q Consensus       105 g~id~li~nag~~~~~~~~~~-~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~  183 (305)
                      +++|+||||||.........+ +++.+.++|++.+++|+.+++++++.+.|.|.++ +++||++||..+..+.+++..|+
T Consensus        83 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~-~g~Iv~iss~~~~~~~~~~~~Y~  161 (261)
T PRK08690         83 DGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGR-NSAIVALSYLGAVRAIPNYNVMG  161 (261)
T ss_pred             CCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhc-CcEEEEEcccccccCCCCcccch
Confidence            999999999998643211112 3567889999999999999999999999988654 58999999999998889999999


Q ss_pred             hhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCC
Q 021960          184 ASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGT  263 (305)
Q Consensus       184 ~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (305)
                      ++|+|+++|+++++.|++++||+||+|+||+++|++.......                 .+..+.   +.+  ..|.++
T Consensus       162 asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~~~~~-----------------~~~~~~---~~~--~~p~~r  219 (261)
T PRK08690        162 MAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGIADF-----------------GKLLGH---VAA--HNPLRR  219 (261)
T ss_pred             hHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhcCCch-----------------HHHHHH---Hhh--cCCCCC
Confidence            9999999999999999999999999999999999975322100                 111111   111  257789


Q ss_pred             CCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          264 TLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       264 ~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      +.+|+|||+.+.||+++.+.++||++|.+|||+.+
T Consensus       220 ~~~peevA~~v~~l~s~~~~~~tG~~i~vdgG~~~  254 (261)
T PRK08690        220 NVTIEEVGNTAAFLLSDLSSGITGEITYVDGGYSI  254 (261)
T ss_pred             CCCHHHHHHHHHHHhCcccCCcceeEEEEcCCccc
Confidence            99999999999999999999999999999999765

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=100.00  E-value=3.5e-43  Score=294.27  Aligned_cols=230  Identities=34%  Similarity=0.469  Sum_probs=203.1

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRL  107 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~i  107 (305)
                      .+++|+++|||||+|||.++|+.|++.|++|++++|+.++++.++.++...++..+.+|++|.++++++++.+.++|++|
T Consensus         3 ~~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~i   82 (246)
T COG4221           3 TLKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRI   82 (246)
T ss_pred             CCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCcc
Confidence            45789999999999999999999999999999999999999998888865678999999999999999999999999999


Q ss_pred             cEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhHH
Q 021960          108 DILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKH  187 (305)
Q Consensus       108 d~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKa  187 (305)
                      |+||||||....    +++.+.+.++|+.++++|++|.++.+++++|.|.+++.|.||++||+++..++++.+.||++|+
T Consensus        83 DiLvNNAGl~~g----~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~~y~~~~vY~ATK~  158 (246)
T COG4221          83 DILVNNAGLALG----DPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRYPYPGGAVYGATKA  158 (246)
T ss_pred             cEEEecCCCCcC----ChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccccccCCCCccchhhHH
Confidence            999999998755    6788999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCCH
Q 021960          188 AIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRS  267 (305)
Q Consensus       188 a~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (305)
                      ++..|++.|++|+..++|||.+|.||.+.|..+...-..                  ..-+.+...+.     ....++|
T Consensus       159 aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~~------------------g~~~~~~~~y~-----~~~~l~p  215 (246)
T COG4221         159 AVRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTVRFE------------------GDDERADKVYK-----GGTALTP  215 (246)
T ss_pred             HHHHHHHHHHHHhcCCCeeEEEecCceecceecccccCC------------------chhhhHHHHhc-----cCCCCCH
Confidence            999999999999999999999999999977764432211                  11122222211     2457799


Q ss_pred             HHHHHHHHHhccCCCCc
Q 021960          268 KDIAEAALYLASDESRY  284 (305)
Q Consensus       268 ~dva~~v~~l~s~~~~~  284 (305)
                      +|||+.|+|.++.+.+.
T Consensus       216 ~dIA~~V~~~~~~P~~v  232 (246)
T COG4221         216 EDIAEAVLFAATQPQHV  232 (246)
T ss_pred             HHHHHHHHHHHhCCCcc
Confidence            99999999999987553

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=100.00  E-value=2.5e-43  Score=309.56  Aligned_cols=247  Identities=25%  Similarity=0.329  Sum_probs=202.3

Q ss_pred             CCCCCEEEEecCC--CchHHHHHHHHHHcCCeEEEEecCcc--hhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHH
Q 021960           28 RLEGKVAIITGGA--RGIGEAAVRLFARHGAKVVIADVEDT--LGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTV  101 (305)
Q Consensus        28 ~l~~k~vlVtGas--~giG~~ia~~l~~~g~~vv~~~r~~~--~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~  101 (305)
                      ++++|+++||||+  +|||+++|++|+++|++|+++.|+..  +.+...+.+  ...++.++.+|++|.++++++++++.
T Consensus         3 ~l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~   82 (258)
T PRK07370          3 DLTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIK   82 (258)
T ss_pred             ccCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHH
Confidence            4689999999986  89999999999999999988865432  111111111  12346788999999999999999999


Q ss_pred             HhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCcc
Q 021960          102 SRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHA  181 (305)
Q Consensus       102 ~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~  181 (305)
                      +++|++|+||||||.........++.+.+.++|++.+++|+.+++++++.++|.|.+  .|+||++||..+..+.+++..
T Consensus        83 ~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~--~g~Iv~isS~~~~~~~~~~~~  160 (258)
T PRK07370         83 QKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSE--GGSIVTLTYLGGVRAIPNYNV  160 (258)
T ss_pred             HHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhh--CCeEEEEeccccccCCcccch
Confidence            999999999999997532111246778899999999999999999999999999964  489999999999989899999


Q ss_pred             chhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCC
Q 021960          182 YTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLK  261 (305)
Q Consensus       182 Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (305)
                      |+++|+|+++|+++|+.|++++||+||+|+||+++|++.... ..              .  ++..+.+..     ..|.
T Consensus       161 Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~~-~~--------------~--~~~~~~~~~-----~~p~  218 (258)
T PRK07370        161 MGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSAV-GG--------------I--LDMIHHVEE-----KAPL  218 (258)
T ss_pred             hhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhcc-cc--------------c--hhhhhhhhh-----cCCc
Confidence            999999999999999999999999999999999999974321 10              0  011111111     2567


Q ss_pred             CCCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          262 GTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       262 ~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      +++.+|+|+++.+.||+++.++++||+++.+|||+++
T Consensus       219 ~r~~~~~dva~~~~fl~s~~~~~~tG~~i~vdgg~~~  255 (258)
T PRK07370        219 RRTVTQTEVGNTAAFLLSDLASGITGQTIYVDAGYCI  255 (258)
T ss_pred             CcCCCHHHHHHHHHHHhChhhccccCcEEEECCcccc
Confidence            8899999999999999999999999999999999764

>PRK06114 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.3e-43  Score=305.10  Aligned_cols=247  Identities=29%  Similarity=0.443  Sum_probs=208.1

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcch-hhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHH
Q 021960           26 HRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTL-GSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVS  102 (305)
Q Consensus        26 ~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~-~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~  102 (305)
                      ..++++|++|||||++|||+++|+.|+++|++|++++|+... .+...+.+  .+.++.++.+|++|+++++++++++.+
T Consensus         3 ~~~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~   82 (254)
T PRK06114          3 LFDLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEA   82 (254)
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            446889999999999999999999999999999999987542 22222222  234688899999999999999999999


Q ss_pred             hcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCC--Cc
Q 021960          103 RYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLG--PH  180 (305)
Q Consensus       103 ~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~--~~  180 (305)
                      .++++|+||||||....    .++.+.+.++|++.+++|+.+++++++.+++.|.+++.++||++||.++..+.++  ..
T Consensus        83 ~~g~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~  158 (254)
T PRK06114         83 ELGALTLAVNAAGIANA----NPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVNRGLLQA  158 (254)
T ss_pred             HcCCCCEEEECCCCCCC----CChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCCCcc
Confidence            99999999999997643    4567789999999999999999999999999998888899999999998876654  68


Q ss_pred             cchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCC
Q 021960          181 AYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNL  260 (305)
Q Consensus       181 ~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (305)
                      .|+++|+|+++++++++.|++++||+||+|+||+++|+|....  .               . .+..   ..+..  ..|
T Consensus       159 ~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~~--~---------------~-~~~~---~~~~~--~~p  215 (254)
T PRK06114        159 HYNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTRP--E---------------M-VHQT---KLFEE--QTP  215 (254)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCcccccc--c---------------c-hHHH---HHHHh--cCC
Confidence            9999999999999999999999999999999999999985320  0               0 0111   11111  357


Q ss_pred             CCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCcccc
Q 021960          261 KGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTS  299 (305)
Q Consensus       261 ~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~  299 (305)
                      .+++.+|+|+++.++||+++.++++||+++.+|||++.+
T Consensus       216 ~~r~~~~~dva~~~~~l~s~~~~~~tG~~i~~dgg~~~~  254 (254)
T PRK06114        216 MQRMAKVDEMVGPAVFLLSDAASFCTGVDLLVDGGFVCW  254 (254)
T ss_pred             CCCCcCHHHHHHHHHHHcCccccCcCCceEEECcCEecC
Confidence            789999999999999999999999999999999998753

>PRK05867 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.6e-43  Score=305.08  Aligned_cols=241  Identities=34%  Similarity=0.500  Sum_probs=204.9

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhcC
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRYG  105 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g  105 (305)
                      .+++|++|||||++|||+++++.|+++|++|++++|+....+...+.+  .+.++..+.+|++|.++++++++++.+.++
T Consensus         6 ~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   85 (253)
T PRK05867          6 DLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELG   85 (253)
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            468999999999999999999999999999999999876655554433  234688899999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-CCEEEEecccccccCC-C-CCccc
Q 021960          106 RLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRG-GGCIISTASVAGVMGG-L-GPHAY  182 (305)
Q Consensus       106 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~-~-~~~~Y  182 (305)
                      ++|+||||||....    .++.+.+.++|++.+++|+.+++++++.+.+.|.+++ +++||++||.++..+. + ....|
T Consensus        86 ~id~lv~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~Y  161 (253)
T PRK05867         86 GIDIAVCNAGIITV----TPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINVPQQVSHY  161 (253)
T ss_pred             CCCEEEECCCCCCC----CChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCCCCCCccch
Confidence            99999999997643    4667789999999999999999999999999997765 5789999998876543 3 45789


Q ss_pred             hhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCC
Q 021960          183 TASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKG  262 (305)
Q Consensus       183 ~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (305)
                      +++|+++++|++++++|++++||+||+|+||+++|++....                  +  +..+.   +..  ..+.+
T Consensus       162 ~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~~------------------~--~~~~~---~~~--~~~~~  216 (253)
T PRK05867        162 CASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEPY------------------T--EYQPL---WEP--KIPLG  216 (253)
T ss_pred             HHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcccccc------------------h--HHHHH---HHh--cCCCC
Confidence            99999999999999999999999999999999999984321                  0  00011   111  25678


Q ss_pred             CCCCHHHHHHHHHHhccCCCCceeccEEEecCCcc
Q 021960          263 TTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT  297 (305)
Q Consensus       263 ~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~  297 (305)
                      ++.+|+|+|+.++||++++++++||++|.+|||++
T Consensus       217 r~~~p~~va~~~~~L~s~~~~~~tG~~i~vdgG~~  251 (253)
T PRK05867        217 RLGRPEELAGLYLYLASEASSYMTGSDIVIDGGYT  251 (253)
T ss_pred             CCcCHHHHHHHHHHHcCcccCCcCCCeEEECCCcc
Confidence            89999999999999999999999999999999975

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=100.00  E-value=9.2e-43  Score=305.65  Aligned_cols=254  Identities=39%  Similarity=0.569  Sum_probs=212.2

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc-----CCCCeEEEEecCCCHHHHHHHHHHHH
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL-----APAPVTFVHCDVSLEEDIENLINSTV  101 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~-----~~~~v~~~~~D~~d~~~i~~~~~~~~  101 (305)
                      .+++||++||||+++|||+++|++|++.|++|++++|+++..+.....+     .+.++..+.||+++.+++++++++..
T Consensus         4 ~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~   83 (270)
T KOG0725|consen    4 GRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAV   83 (270)
T ss_pred             ccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999999988766555443     23568999999999999999999999


Q ss_pred             Hh-cCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhH-HHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCC
Q 021960          102 SR-YGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVK-GMALGIKHAARVMINRGGGCIISTASVAGVMGGLGP  179 (305)
Q Consensus       102 ~~-~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~-~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~  179 (305)
                      ++ +|+||++|||||.....   .++.+.+.++|++.+++|+. +.+++.+.+.+++.+++++.|+++||..+..+....
T Consensus        84 ~~~~GkidiLvnnag~~~~~---~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~~~~~  160 (270)
T KOG0725|consen   84 EKFFGKIDILVNNAGALGLT---GSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGPGPGS  160 (270)
T ss_pred             HHhCCCCCEEEEcCCcCCCC---CChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccCCCCC
Confidence            88 79999999999988653   37889999999999999999 466677777777777788999999999998876655


Q ss_pred             -ccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHH-Hhhc
Q 021960          180 -HAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEF-VSGL  257 (305)
Q Consensus       180 -~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  257 (305)
                       ..|+++|+|+++|+|++|.|+.++|||||+|+||.+.|++....+..                  ...+.+.++ ...-
T Consensus       161 ~~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~~~~~~~~------------------~~~~~~~~~~~~~~  222 (270)
T KOG0725|consen  161 GVAYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSLRAAGLDD------------------GEMEEFKEATDSKG  222 (270)
T ss_pred             cccchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCcccccccc------------------chhhHHhhhhcccc
Confidence             79999999999999999999999999999999999999982111111                  000111111 0111


Q ss_pred             CCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCcccccc
Q 021960          258 GNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTSRN  301 (305)
Q Consensus       258 ~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~~~  301 (305)
                      ..|.++++.|+|+++.+.||+++.+.|+||++|.+|||++....
T Consensus       223 ~~p~gr~g~~~eva~~~~fla~~~asyitG~~i~vdgG~~~~~~  266 (270)
T KOG0725|consen  223 AVPLGRVGTPEEVAEAAAFLASDDASYITGQTIIVDGGFTVVGP  266 (270)
T ss_pred             ccccCCccCHHHHHHhHHhhcCcccccccCCEEEEeCCEEeecc
Confidence            35789999999999999999999877999999999999987554

>PRK07062 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9e-43  Score=306.92  Aligned_cols=256  Identities=26%  Similarity=0.341  Sum_probs=213.2

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc----CCCCeEEEEecCCCHHHHHHHHHHHHH
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL----APAPVTFVHCDVSLEEDIENLINSTVS  102 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~----~~~~v~~~~~D~~d~~~i~~~~~~~~~  102 (305)
                      .++++|++|||||++|||+++++.|+++|++|++++|+....+...+.+    .+.++.++.+|++|.++++++++++.+
T Consensus         4 ~~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   83 (265)
T PRK07062          4 IQLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEA   83 (265)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHH
Confidence            4678999999999999999999999999999999999876554433332    234688999999999999999999999


Q ss_pred             hcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccc
Q 021960          103 RYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAY  182 (305)
Q Consensus       103 ~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y  182 (305)
                      .++++|+||||||....    .++.+.+.++|++.+++|+.+++++++.++|.|++++.++||++||..+..+.++...|
T Consensus        84 ~~g~id~li~~Ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y  159 (265)
T PRK07062         84 RFGGVDMLVNNAGQGRV----STFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQPEPHMVAT  159 (265)
T ss_pred             hcCCCCEEEECCCCCCC----CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccCCCCCchHh
Confidence            99999999999997533    56778899999999999999999999999999988878999999999999998899999


Q ss_pred             hhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCC
Q 021960          183 TASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKG  262 (305)
Q Consensus       183 ~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (305)
                      +++|+++++|+++++.|+.++||+||+|+||+++|++....+.....         ...+.++..+   ........+.+
T Consensus       160 ~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~---------~~~~~~~~~~---~~~~~~~~p~~  227 (265)
T PRK07062        160 SAARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQWRRRYEARAD---------PGQSWEAWTA---ALARKKGIPLG  227 (265)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccchhhhHHHHhhc---------cCCChHHHHH---HHhhcCCCCcC
Confidence            99999999999999999999999999999999999985443221000         0011111111   11111235778


Q ss_pred             CCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          263 TTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       263 ~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      ++.+|+|+|+.++||+++.++++||+++.+|||+..
T Consensus       228 r~~~p~~va~~~~~L~s~~~~~~tG~~i~vdgg~~~  263 (265)
T PRK07062        228 RLGRPDEAARALFFLASPLSSYTTGSHIDVSGGFAR  263 (265)
T ss_pred             CCCCHHHHHHHHHHHhCchhcccccceEEEcCceEe
Confidence            999999999999999999999999999999999753

>PRK08589 short chain dehydrogenase; Validated

Probab=100.00  E-value=2.3e-42  Score=305.72  Aligned_cols=250  Identities=32%  Similarity=0.520  Sum_probs=208.1

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhcC
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRYG  105 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g  105 (305)
                      .+++|++|||||++|||+++++.|+++|++|++++|+ ...+...+.+  .+.++.++.+|++|.++++++++++.+.++
T Consensus         3 ~l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   81 (272)
T PRK08589          3 RLENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFG   81 (272)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence            4679999999999999999999999999999999998 4443333332  234688999999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhh
Q 021960          106 RLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTAS  185 (305)
Q Consensus       106 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  185 (305)
                      ++|+||||||.....   .++.+.+.+.|++++++|+.+++++++.++|.|.+++ ++||++||..+..+.++...|+++
T Consensus        82 ~id~li~~Ag~~~~~---~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~as  157 (272)
T PRK08589         82 RVDVLFNNAGVDNAA---GRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQG-GSIINTSSFSGQAADLYRSGYNAA  157 (272)
T ss_pred             CcCEEEECCCCCCCC---CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEeCchhhcCCCCCCchHHHH
Confidence            999999999976432   4566789999999999999999999999999997765 899999999999988899999999


Q ss_pred             HHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCC
Q 021960          186 KHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL  265 (305)
Q Consensus       186 Kaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (305)
                      |+|+++|+++++.|++++||+||+|+||+++|++.......   .            .+...+.+..... ...+.+++.
T Consensus       158 Kaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~---~------------~~~~~~~~~~~~~-~~~~~~~~~  221 (272)
T PRK08589        158 KGAVINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGT---S------------EDEAGKTFRENQK-WMTPLGRLG  221 (272)
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhhccc---c------------hhhHHHHHhhhhh-ccCCCCCCc
Confidence            99999999999999999999999999999999986443211   0            0000011111111 124678889


Q ss_pred             CHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          266 RSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       266 ~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      +|+|+|+.++||+++..++++|++|.+|||...
T Consensus       222 ~~~~va~~~~~l~s~~~~~~~G~~i~vdgg~~~  254 (272)
T PRK08589        222 KPEEVAKLVVFLASDDSSFITGETIRIDGGVMA  254 (272)
T ss_pred             CHHHHHHHHHHHcCchhcCcCCCEEEECCCccc
Confidence            999999999999999999999999999999754

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.1e-42  Score=307.63  Aligned_cols=245  Identities=25%  Similarity=0.320  Sum_probs=201.6

Q ss_pred             CCCCCEEEEecCC--CchHHHHHHHHHHcCCeEEEEecCcch---hhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHH
Q 021960           28 RLEGKVAIITGGA--RGIGEAAVRLFARHGAKVVIADVEDTL---GSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVS  102 (305)
Q Consensus        28 ~l~~k~vlVtGas--~giG~~ia~~l~~~g~~vv~~~r~~~~---~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~  102 (305)
                      .|++|++|||||+  +|||+++|+.|+++|++|++++|++..   .+.+.+.+ + .+..+.+|++|.++++++++++.+
T Consensus         7 ~~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~-~-~~~~~~~Dl~~~~~v~~~~~~~~~   84 (272)
T PRK08159          7 LMAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAEL-G-AFVAGHCDVTDEASIDAVFETLEK   84 (272)
T ss_pred             cccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhc-C-CceEEecCCCCHHHHHHHHHHHHH
Confidence            5678999999997  899999999999999999998876322   22222222 2 255789999999999999999999


Q ss_pred             hcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccc
Q 021960          103 RYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAY  182 (305)
Q Consensus       103 ~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y  182 (305)
                      ++|++|+||||||.........++.+.+.++|++.+++|+.+++++++.++|.|.+  +|+||++||.++..+.+++..|
T Consensus        85 ~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~--~g~Iv~iss~~~~~~~p~~~~Y  162 (272)
T PRK08159         85 KWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTD--GGSILTLTYYGAEKVMPHYNVM  162 (272)
T ss_pred             hcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCC--CceEEEEeccccccCCCcchhh
Confidence            99999999999997643211246678899999999999999999999999998843  5899999999988888999999


Q ss_pred             hhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCC
Q 021960          183 TASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKG  262 (305)
Q Consensus       183 ~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (305)
                      +++|+|+.+|+++++.|++++||+||+|+||+++|+|.... +.                 .+..   ..... ...|.+
T Consensus       163 ~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~-~~-----------------~~~~---~~~~~-~~~p~~  220 (272)
T PRK08159        163 GVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASGI-GD-----------------FRYI---LKWNE-YNAPLR  220 (272)
T ss_pred             hhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhcC-Cc-----------------chHH---HHHHH-hCCccc
Confidence            99999999999999999999999999999999999874211 00                 0000   01111 125678


Q ss_pred             CCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          263 TTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       263 ~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      ++.+|||+|+.++||+++.++++||++|.+|||++.
T Consensus       221 r~~~peevA~~~~~L~s~~~~~itG~~i~vdgG~~~  256 (272)
T PRK08159        221 RTVTIEEVGDSALYLLSDLSRGVTGEVHHVDSGYHV  256 (272)
T ss_pred             ccCCHHHHHHHHHHHhCccccCccceEEEECCCcee
Confidence            889999999999999999999999999999999764

>PRK07478 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.4e-42  Score=302.30  Aligned_cols=248  Identities=39%  Similarity=0.585  Sum_probs=210.6

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhcC
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRYG  105 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g  105 (305)
                      ++++|++|||||++|||+++++.|+++|++|++++|+....+.+.+.+  .+.++.++.+|++|.++++++++++.++++
T Consensus         3 ~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (254)
T PRK07478          3 RLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFG   82 (254)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence            567899999999999999999999999999999999876655544433  234688999999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccc-cCCCCCccchh
Q 021960          106 RLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGV-MGGLGPHAYTA  184 (305)
Q Consensus       106 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~-~~~~~~~~Y~~  184 (305)
                      ++|+||||||.....   .++.+.+.+++++.+++|+.+++++++.+++.|.+++.++||++||..+. .+.+++..|++
T Consensus        83 ~id~li~~ag~~~~~---~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~~Y~~  159 (254)
T PRK07478         83 GLDIAFNNAGTLGEM---GPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTAGFPGMAAYAA  159 (254)
T ss_pred             CCCEEEECCCCCCCC---CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhccCCCCcchhHH
Confidence            999999999975432   45677899999999999999999999999999988888999999999886 57788899999


Q ss_pred             hHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCC
Q 021960          185 SKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT  264 (305)
Q Consensus       185 sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (305)
                      ||++++.++++++.|++++||+|++|+||+++|+|.......                 .+.    ..+... ..+.+++
T Consensus       160 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~-----------------~~~----~~~~~~-~~~~~~~  217 (254)
T PRK07478        160 SKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAMGDT-----------------PEA----LAFVAG-LHALKRM  217 (254)
T ss_pred             HHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCcccccccCC-----------------HHH----HHHHHh-cCCCCCC
Confidence            999999999999999999999999999999999985432100                 011    111111 2456788


Q ss_pred             CCHHHHHHHHHHhccCCCCceeccEEEecCCccccc
Q 021960          265 LRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTSR  300 (305)
Q Consensus       265 ~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~~  300 (305)
                      .+|+|+|+.++||+++...+++|++|.+|||++..+
T Consensus       218 ~~~~~va~~~~~l~s~~~~~~~G~~~~~dgg~~~~~  253 (254)
T PRK07478        218 AQPEEIAQAALFLASDAASFVTGTALLVDGGVSITR  253 (254)
T ss_pred             cCHHHHHHHHHHHcCchhcCCCCCeEEeCCchhccC
Confidence            899999999999999999999999999999987654

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.7e-42  Score=304.53  Aligned_cols=246  Identities=20%  Similarity=0.210  Sum_probs=198.4

Q ss_pred             CCCCCEEEEecC--CCchHHHHHHHHHHcCCeEEEEecCc---chhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHH
Q 021960           28 RLEGKVAIITGG--ARGIGEAAVRLFARHGAKVVIADVED---TLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVS  102 (305)
Q Consensus        28 ~l~~k~vlVtGa--s~giG~~ia~~l~~~g~~vv~~~r~~---~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~  102 (305)
                      .+++|++|||||  ++|||+++|+.|+++|++|++++|..   +..+.+.+.. +. ...+.+|++|+++++++++++.+
T Consensus         3 ~l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~Dv~d~~~v~~~~~~~~~   80 (260)
T PRK06997          3 FLAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEF-GS-DLVFPCDVASDEQIDALFASLGQ   80 (260)
T ss_pred             ccCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhc-CC-cceeeccCCCHHHHHHHHHHHHH
Confidence            468999999996  68999999999999999999886542   2222222222 22 34689999999999999999999


Q ss_pred             hcCCccEEEEcCCCCCCCCCCCc-ccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCcc
Q 021960          103 RYGRLDILYNNAGVLGNQRKHKS-IIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHA  181 (305)
Q Consensus       103 ~~g~id~li~nag~~~~~~~~~~-~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~  181 (305)
                      .+|++|++|||||.........+ +.+.+.++|++.+++|+.+++++++.++|.|.  +.|+||++||..+..+.++...
T Consensus        81 ~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~--~~g~Ii~iss~~~~~~~~~~~~  158 (260)
T PRK06997         81 HWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLS--DDASLLTLSYLGAERVVPNYNT  158 (260)
T ss_pred             HhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcC--CCceEEEEeccccccCCCCcch
Confidence            99999999999997532110112 34678899999999999999999999999993  4589999999999888888999


Q ss_pred             chhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCC
Q 021960          182 YTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLK  261 (305)
Q Consensus       182 Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (305)
                      |+++|+|+++|+++++.|++++||+||+|+||+++|++.......                 ++..+.+   ..  ..|.
T Consensus       159 Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~-----------------~~~~~~~---~~--~~p~  216 (260)
T PRK06997        159 MGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASGIKDF-----------------GKILDFV---ES--NAPL  216 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhccccch-----------------hhHHHHH---Hh--cCcc
Confidence            999999999999999999999999999999999999874321100                 0111111   11  2467


Q ss_pred             CCCCCHHHHHHHHHHhccCCCCceeccEEEecCCcccc
Q 021960          262 GTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTS  299 (305)
Q Consensus       262 ~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~  299 (305)
                      ++..+|||+++.+.||++++++++||++|.+|||++..
T Consensus       217 ~r~~~pedva~~~~~l~s~~~~~itG~~i~vdgg~~~~  254 (260)
T PRK06997        217 RRNVTIEEVGNVAAFLLSDLASGVTGEITHVDSGFNAV  254 (260)
T ss_pred             cccCCHHHHHHHHHHHhCccccCcceeEEEEcCChhhc
Confidence            88999999999999999999999999999999997653

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=3.9e-42  Score=302.44  Aligned_cols=246  Identities=18%  Similarity=0.238  Sum_probs=199.0

Q ss_pred             CCCCEEEEecCCC--chHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc-CCCCeEEEEecCCCHHHHHHHHHHHHHhcC
Q 021960           29 LEGKVAIITGGAR--GIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL-APAPVTFVHCDVSLEEDIENLINSTVSRYG  105 (305)
Q Consensus        29 l~~k~vlVtGas~--giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~-~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g  105 (305)
                      +++|++|||||++  |||+++|+.|+++|++|++++|++...+...+.. ....+..+.||++|.++++++++++.+.+|
T Consensus         4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   83 (262)
T PRK07984          4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWP   83 (262)
T ss_pred             cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcC
Confidence            6899999999986  9999999999999999999988742222222211 123466789999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCC-CcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchh
Q 021960          106 RLDILYNNAGVLGNQRKH-KSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTA  184 (305)
Q Consensus       106 ~id~li~nag~~~~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~  184 (305)
                      ++|++|||||........ ..+.+.+.++|++.+++|+.+++.+++.+.+.+.  .+|+||++||.++..+.+++..|++
T Consensus        84 ~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~g~Iv~iss~~~~~~~~~~~~Y~a  161 (262)
T PRK07984         84 KFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLN--PGSALLTLSYLGAERAIPNYNVMGL  161 (262)
T ss_pred             CCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhc--CCcEEEEEecCCCCCCCCCcchhHH
Confidence            999999999975332111 1255678999999999999999999999988663  3589999999999888889999999


Q ss_pred             hHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCC
Q 021960          185 SKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT  264 (305)
Q Consensus       185 sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (305)
                      ||+|+++|+++++.|++++||+||+|+||+++|++.... +.                .++..+..   ..  ..|.+++
T Consensus       162 sKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~-~~----------------~~~~~~~~---~~--~~p~~r~  219 (262)
T PRK07984        162 AKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGI-KD----------------FRKMLAHC---EA--VTPIRRT  219 (262)
T ss_pred             HHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHhcC-Cc----------------hHHHHHHH---HH--cCCCcCC
Confidence            999999999999999999999999999999999873211 00                00111111   11  2567889


Q ss_pred             CCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          265 LRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       265 ~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      .+|+||++.++||+++.+++++|+++.+|||+..
T Consensus       220 ~~pedva~~~~~L~s~~~~~itG~~i~vdgg~~~  253 (262)
T PRK07984        220 VTIEDVGNSAAFLCSDLSAGISGEVVHVDGGFSI  253 (262)
T ss_pred             CCHHHHHHHHHHHcCcccccccCcEEEECCCccc
Confidence            9999999999999999999999999999999754

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=100.00  E-value=3.5e-42  Score=302.55  Aligned_cols=251  Identities=26%  Similarity=0.358  Sum_probs=208.1

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecC-cchhhhHhhhc---CCCCeEEEEecCCCHHHHHHHHHHHH
Q 021960           26 HRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVE-DTLGSVLASTL---APAPVTFVHCDVSLEEDIENLINSTV  101 (305)
Q Consensus        26 ~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~-~~~~~~~~~~~---~~~~v~~~~~D~~d~~~i~~~~~~~~  101 (305)
                      ..++++|++|||||++|||+++++.|+++|++|+++.|+ .+..+...+.+   .+.++.++.+|++|.++++++++++.
T Consensus         3 ~~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   82 (260)
T PRK08416          3 SNEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKID   82 (260)
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHH
Confidence            346789999999999999999999999999999988654 33333222222   24568899999999999999999999


Q ss_pred             HhcCCccEEEEcCCCCCCC--CCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCC
Q 021960          102 SRYGRLDILYNNAGVLGNQ--RKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGP  179 (305)
Q Consensus       102 ~~~g~id~li~nag~~~~~--~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~  179 (305)
                      +.++++|+||||||.....  ....++.+.+.+++++.+++|+.+++.+++.+++.|.+++.++||++||..+..+.+++
T Consensus        83 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  162 (260)
T PRK08416         83 EDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLVYIENY  162 (260)
T ss_pred             HhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEeccccccCCCCc
Confidence            9999999999999865321  01245667888999999999999999999999999988778999999999998888999


Q ss_pred             ccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCC
Q 021960          180 HAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGN  259 (305)
Q Consensus       180 ~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (305)
                      ..|+++|+++++|+++++.|++++||+|++|+||+++|+|.......                 ++..+.+   ..  ..
T Consensus       163 ~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~~~~-----------------~~~~~~~---~~--~~  220 (260)
T PRK08416        163 AGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAFTNY-----------------EEVKAKT---EE--LS  220 (260)
T ss_pred             ccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhccCC-----------------HHHHHHH---Hh--cC
Confidence            99999999999999999999999999999999999999985432110                 1111111   11  24


Q ss_pred             CCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          260 LKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       260 ~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      +.+++.+|+|+|+.++||+++..++++|+++.+|||++.
T Consensus       221 ~~~r~~~p~~va~~~~~l~~~~~~~~~G~~i~vdgg~~~  259 (260)
T PRK08416        221 PLNRMGQPEDLAGACLFLCSEKASWLTGQTIVVDGGTTF  259 (260)
T ss_pred             CCCCCCCHHHHHHHHHHHcChhhhcccCcEEEEcCCeec
Confidence            678899999999999999999999999999999999764

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=100.00  E-value=1e-41  Score=298.45  Aligned_cols=244  Identities=30%  Similarity=0.463  Sum_probs=205.5

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhh-cCCCCeEEEEecCCCHHHHHHHHHHHHHhcC
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLAST-LAPAPVTFVHCDVSLEEDIENLINSTVSRYG  105 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~-~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g  105 (305)
                      .+++||++|||||++|||++++++|+++|++|++++++.... ...+. ..+.++.++.+|++|.++++++++++.+.++
T Consensus         6 ~~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   84 (253)
T PRK08993          6 FSLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTE-TIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFG   84 (253)
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHH-HHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            357899999999999999999999999999999887754321 11111 1244688999999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-CCEEEEecccccccCCCCCccchh
Q 021960          106 RLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRG-GGCIISTASVAGVMGGLGPHAYTA  184 (305)
Q Consensus       106 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~~  184 (305)
                      ++|++|||||....    .++.+.+.++|++.+++|+.+++++++++.+.|.+++ .|+||++||..+..+.++...|++
T Consensus        85 ~~D~li~~Ag~~~~----~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~  160 (253)
T PRK08993         85 HIDILVNNAGLIRR----EDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVPSYTA  160 (253)
T ss_pred             CCCEEEECCCCCCC----CCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCCCCCcchHH
Confidence            99999999997543    4567889999999999999999999999999997764 589999999999998888999999


Q ss_pred             hHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCC
Q 021960          185 SKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT  264 (305)
Q Consensus       185 sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (305)
                      +|+|+++++++++.|+.++||+|++|+||+++|++.....+.                 +...+.   +..  ..|.+++
T Consensus       161 sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~~~~-----------------~~~~~~---~~~--~~p~~r~  218 (253)
T PRK08993        161 SKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRAD-----------------EQRSAE---ILD--RIPAGRW  218 (253)
T ss_pred             HHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhhhccc-----------------hHHHHH---HHh--cCCCCCC
Confidence            999999999999999999999999999999999985432111                 111111   111  2467889


Q ss_pred             CCHHHHHHHHHHhccCCCCceeccEEEecCCcc
Q 021960          265 LRSKDIAEAALYLASDESRYVSGHNLVVDGGVT  297 (305)
Q Consensus       265 ~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~  297 (305)
                      .+|+|+|+.+.||+++.+++++|+++.+|||+.
T Consensus       219 ~~p~eva~~~~~l~s~~~~~~~G~~~~~dgg~~  251 (253)
T PRK08993        219 GLPSDLMGPVVFLASSASDYINGYTIAVDGGWL  251 (253)
T ss_pred             cCHHHHHHHHHHHhCccccCccCcEEEECCCEe
Confidence            999999999999999999999999999999964

>PRK06398 aldose dehydrogenase; Validated

Probab=100.00  E-value=1.1e-41  Score=299.12  Aligned_cols=245  Identities=32%  Similarity=0.477  Sum_probs=206.6

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRL  107 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~i  107 (305)
                      ++++|++|||||++|||+++|+.|+++|++|++++|++...         .++.++.+|++|.++++++++++.+.++++
T Consensus         3 ~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~---------~~~~~~~~D~~~~~~i~~~~~~~~~~~~~i   73 (258)
T PRK06398          3 GLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSY---------NDVDYFKVDVSNKEQVIKGIDYVISKYGRI   73 (258)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcccc---------CceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            57899999999999999999999999999999999876432         247889999999999999999999999999


Q ss_pred             cEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhHH
Q 021960          108 DILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKH  187 (305)
Q Consensus       108 d~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKa  187 (305)
                      |+||||||....    .++.+.+.++|++.+++|+.+++++++.++|.|.+++.++||++||..+..+.+++..|+++|+
T Consensus        74 d~li~~Ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKa  149 (258)
T PRK06398         74 DILVNNAGIESY----GAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAVTRNAAAYVTSKH  149 (258)
T ss_pred             CEEEECCCCCCC----CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccCCCCCchhhhhHH
Confidence            999999997533    5677889999999999999999999999999998888899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCCH
Q 021960          188 AIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRS  267 (305)
Q Consensus       188 a~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (305)
                      ++++++++++.|+.+. |+||+|+||+++|++..........           ...+...+....+..  ..+.+++.+|
T Consensus       150 al~~~~~~la~e~~~~-i~vn~i~PG~v~T~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~--~~~~~~~~~p  215 (258)
T PRK06398        150 AVLGLTRSIAVDYAPT-IRCVAVCPGSIRTPLLEWAAELEVG-----------KDPEHVERKIREWGE--MHPMKRVGKP  215 (258)
T ss_pred             HHHHHHHHHHHHhCCC-CEEEEEecCCccchHHhhhhhcccc-----------CChhhhHHHHHhhhh--cCCcCCCcCH
Confidence            9999999999999875 9999999999999986543211000           000011111111111  2567888999


Q ss_pred             HHHHHHHHHhccCCCCceeccEEEecCCcccc
Q 021960          268 KDIAEAALYLASDESRYVSGHNLVVDGGVTTS  299 (305)
Q Consensus       268 ~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~  299 (305)
                      +|+|+.++||+++.+++++|+++.+|||+...
T Consensus       216 ~eva~~~~~l~s~~~~~~~G~~i~~dgg~~~~  247 (258)
T PRK06398        216 EEVAYVVAFLASDLASFITGECVTVDGGLRAL  247 (258)
T ss_pred             HHHHHHHHHHcCcccCCCCCcEEEECCccccC
Confidence            99999999999999999999999999997654

>PRK08265 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.9e-42  Score=300.47  Aligned_cols=249  Identities=31%  Similarity=0.452  Sum_probs=210.4

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRL  107 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~i  107 (305)
                      ++++|++|||||++|||+++++.|+++|++|++++|+....+.+.+.. +.++.++.+|++|.++++++++++.+.++++
T Consensus         3 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i   81 (261)
T PRK08265          3 GLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASL-GERARFIATDITDDAAIERAVATVVARFGRV   81 (261)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-CCeeEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            568999999999999999999999999999999999876555544443 3458899999999999999999999999999


Q ss_pred             cEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhHH
Q 021960          108 DILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKH  187 (305)
Q Consensus       108 d~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKa  187 (305)
                      |+||||||....    .. .+.+.++|++.+++|+.+++++++.+++.|. ++.++||++||.++..+.++...|+++|+
T Consensus        82 d~lv~~ag~~~~----~~-~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~g~ii~isS~~~~~~~~~~~~Y~asKa  155 (261)
T PRK08265         82 DILVNLACTYLD----DG-LASSRADWLAALDVNLVSAAMLAQAAHPHLA-RGGGAIVNFTSISAKFAQTGRWLYPASKA  155 (261)
T ss_pred             CEEEECCCCCCC----Cc-CcCCHHHHHHHHhHhhHHHHHHHHHHHHHHh-cCCcEEEEECchhhccCCCCCchhHHHHH
Confidence            999999997533    12 3568899999999999999999999999997 56789999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCCH
Q 021960          188 AIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRS  267 (305)
Q Consensus       188 a~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (305)
                      ++++++++++.|++++||+||+|+||+++|++.......   .             .+   ....... ...+.+++.+|
T Consensus       156 a~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~~~~---~-------------~~---~~~~~~~-~~~p~~r~~~p  215 (261)
T PRK08265        156 AIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDELSGG---D-------------RA---KADRVAA-PFHLLGRVGDP  215 (261)
T ss_pred             HHHHHHHHHHHHhcccCEEEEEEccCCccChhhhhhccc---c-------------hh---HHHHhhc-ccCCCCCccCH
Confidence            999999999999999999999999999999986443211   0             00   0011111 12467889999


Q ss_pred             HHHHHHHHHhccCCCCceeccEEEecCCcccccccc
Q 021960          268 KDIAEAALYLASDESRYVSGHNLVVDGGVTTSRNCV  303 (305)
Q Consensus       268 ~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~~~~~  303 (305)
                      +|+|+.+.||+++...++||++|.+|||++...+..
T Consensus       216 ~dva~~~~~l~s~~~~~~tG~~i~vdgg~~~~~~~~  251 (261)
T PRK08265        216 EEVAQVVAFLCSDAASFVTGADYAVDGGYSALGPEQ  251 (261)
T ss_pred             HHHHHHHHHHcCccccCccCcEEEECCCeeccCCCC
Confidence            999999999999999999999999999987765543

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=100.00  E-value=8.2e-42  Score=304.64  Aligned_cols=246  Identities=21%  Similarity=0.239  Sum_probs=197.6

Q ss_pred             CCCCCCCEEEEecC--CCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcC------------C---CCeEEEEecC-
Q 021960           26 HRRLEGKVAIITGG--ARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLA------------P---APVTFVHCDV-   87 (305)
Q Consensus        26 ~~~l~~k~vlVtGa--s~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~------------~---~~v~~~~~D~-   87 (305)
                      ..+|+||++|||||  |+|||+++|+.|+++|++|++ .|....++.......            +   .....+.+|+ 
T Consensus         4 ~~~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   82 (303)
T PLN02730          4 PIDLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAV   82 (303)
T ss_pred             CcCCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeeccee
Confidence            34689999999999  899999999999999999998 555444333321111            1   1145788898 


Q ss_pred             -CC------------------HHHHHHHHHHHHHhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHH
Q 021960           88 -SL------------------EEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALG  148 (305)
Q Consensus        88 -~d------------------~~~i~~~~~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l  148 (305)
                       ++                  .++++++++++.+.+|++|+||||||....  ...++.+.+.++|++++++|+.+++++
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~--~~~~~~~~~~e~~~~~~~vN~~~~~~l  160 (303)
T PLN02730         83 FDTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPE--VTKPLLETSRKGYLAAISASSYSFVSL  160 (303)
T ss_pred             cCccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCcccc--CCCChhhCCHHHHHHHHHHHhHHHHHH
Confidence             33                  458999999999999999999999986432  125678899999999999999999999


Q ss_pred             HHHHHHHHHcCCCCEEEEecccccccCCCCC-ccchhhHHHHHHHHHHHHHHHCc-CCcEEEEEeCCccccccchhcccC
Q 021960          149 IKHAARVMINRGGGCIISTASVAGVMGGLGP-HAYTASKHAIVGLTKNAACELGR-YGIRVNCISPFGVATSMLVNAWRN  226 (305)
Q Consensus       149 ~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~-~~Y~~sKaa~~~~~~~la~e~~~-~~i~v~~v~PG~v~T~~~~~~~~~  226 (305)
                      +|.++|.|.++  |+||++||..+..+.++. ..|+++|+|+++|+++|+.|+++ +||+||+|+||+++|+|... ...
T Consensus       161 ~~~~~p~m~~~--G~II~isS~a~~~~~p~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~~~~~-~~~  237 (303)
T PLN02730        161 LQHFGPIMNPG--GASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGSRAAKA-IGF  237 (303)
T ss_pred             HHHHHHHHhcC--CEEEEEechhhcCCCCCCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCchhhc-ccc
Confidence            99999999653  899999999998888765 58999999999999999999986 79999999999999998543 110


Q ss_pred             CCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          227 SGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                                      .++..+...   .  ..|.+++.+|+|+++.++||+|+.+.++||+++.+|||++.
T Consensus       238 ----------------~~~~~~~~~---~--~~pl~r~~~peevA~~~~fLaS~~a~~itG~~l~vdGG~~~  288 (303)
T PLN02730        238 ----------------IDDMIEYSY---A--NAPLQKELTADEVGNAAAFLASPLASAITGATIYVDNGLNA  288 (303)
T ss_pred             ----------------cHHHHHHHH---h--cCCCCCCcCHHHHHHHHHHHhCccccCccCCEEEECCCccc
Confidence                            011111111   1  23567888999999999999999999999999999999754

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=1e-41  Score=299.32  Aligned_cols=255  Identities=19%  Similarity=0.217  Sum_probs=207.7

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcC-CCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEEE
Q 021960           33 VAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLA-PAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILY  111 (305)
Q Consensus        33 ~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~-~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~li  111 (305)
                      ++|||||++|||++++++|+++|++|++++|++...+...+.+. ..++.++.+|++|.++++++++++.+.++++|+||
T Consensus         2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~li   81 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDALV   81 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence            68999999999999999999999999999998766554443331 23588899999999999999999999999999999


Q ss_pred             EcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHc-CCCCEEEEecccccccCCCCCccchhhHHHHH
Q 021960          112 NNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMIN-RGGGCIISTASVAGVMGGLGPHAYTASKHAIV  190 (305)
Q Consensus       112 ~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~~iv~isS~~~~~~~~~~~~Y~~sKaa~~  190 (305)
                      ||||.....  ..++.+.+.++|.+.+++|+.+++++++.+++.|.+ ++.|+||++||.++..+.++...|+++|++++
T Consensus        82 ~naG~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sKaa~~  159 (259)
T PRK08340         82 WNAGNVRCE--PCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEPMPPLVLADVTRAGLV  159 (259)
T ss_pred             ECCCCCCCC--ccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCCCCCchHHHHHHHHHH
Confidence            999975321  135667888999999999999999999999998864 56789999999999988889999999999999


Q ss_pred             HHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCCHHHH
Q 021960          191 GLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSKDI  270 (305)
Q Consensus       191 ~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv  270 (305)
                      +|+++++.|++++||+||+|+||+++|++..+.+....        .......++...  ..+..  ..|.+++.+|+||
T Consensus       160 ~~~~~la~e~~~~gI~v~~v~pG~v~t~~~~~~~~~~~--------~~~~~~~~~~~~--~~~~~--~~p~~r~~~p~dv  227 (259)
T PRK08340        160 QLAKGVSRTYGGKGIRAYTVLLGSFDTPGARENLARIA--------EERGVSFEETWE--REVLE--RTPLKRTGRWEEL  227 (259)
T ss_pred             HHHHHHHHHhCCCCEEEEEeccCcccCccHHHHHHhhh--------hccCCchHHHHH--HHHhc--cCCccCCCCHHHH
Confidence            99999999999999999999999999998654322100        000011111110  11111  2567899999999


Q ss_pred             HHHHHHhccCCCCceeccEEEecCCcccccc
Q 021960          271 AEAALYLASDESRYVSGHNLVVDGGVTTSRN  301 (305)
Q Consensus       271 a~~v~~l~s~~~~~~tG~~i~idgG~~~~~~  301 (305)
                      |+.+.||++++++++||+++.+|||+...-|
T Consensus       228 a~~~~fL~s~~~~~itG~~i~vdgg~~~~~~  258 (259)
T PRK08340        228 GSLIAFLLSENAEYMLGSTIVFDGAMTRGVN  258 (259)
T ss_pred             HHHHHHHcCcccccccCceEeecCCcCCCCC
Confidence            9999999999999999999999999876554

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-41  Score=297.86  Aligned_cols=246  Identities=29%  Similarity=0.409  Sum_probs=211.3

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcC--CCCeEEEEecCCCHHHHHHHHHHHHHhcC
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLA--PAPVTFVHCDVSLEEDIENLINSTVSRYG  105 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~--~~~v~~~~~D~~d~~~i~~~~~~~~~~~g  105 (305)
                      ++++|++|||||++|||++++++|+++|++|++++|+..........+.  +.++.++.+|++|.++++++++++.+.++
T Consensus         6 ~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   85 (254)
T PRK08085          6 SLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIG   85 (254)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcC
Confidence            5789999999999999999999999999999999998766554443332  34578899999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhh
Q 021960          106 RLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTAS  185 (305)
Q Consensus       106 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  185 (305)
                      ++|+||||||....    .++.+.+.++|++.+++|+.+++.+++.+.+.+.+++.++||++||..+..+.++...|+++
T Consensus        86 ~id~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  161 (254)
T PRK08085         86 PIDVLINNAGIQRR----HPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSELGRDTITPYAAS  161 (254)
T ss_pred             CCCEEEECCCcCCC----CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhccCCCCCcchHHH
Confidence            99999999997533    46677899999999999999999999999999987778999999999998888899999999


Q ss_pred             HHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCC
Q 021960          186 KHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL  265 (305)
Q Consensus       186 Kaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (305)
                      |+++++++++++.|++++||++|+|+||+++|++.......                 ++.    ..+... ..|.+++.
T Consensus       162 K~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~~-----------------~~~----~~~~~~-~~p~~~~~  219 (254)
T PRK08085        162 KGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVED-----------------EAF----TAWLCK-RTPAARWG  219 (254)
T ss_pred             HHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhccC-----------------HHH----HHHHHh-cCCCCCCc
Confidence            99999999999999999999999999999999985432110                 111    111111 35778899


Q ss_pred             CHHHHHHHHHHhccCCCCceeccEEEecCCcccc
Q 021960          266 RSKDIAEAALYLASDESRYVSGHNLVVDGGVTTS  299 (305)
Q Consensus       266 ~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~  299 (305)
                      +|+|+++.+.||+++.++++||+++.+|||+...
T Consensus       220 ~~~~va~~~~~l~~~~~~~i~G~~i~~dgg~~~~  253 (254)
T PRK08085        220 DPQELIGAAVFLSSKASDFVNGHLLFVDGGMLVA  253 (254)
T ss_pred             CHHHHHHHHHHHhCccccCCcCCEEEECCCeeec
Confidence            9999999999999999999999999999998653

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.2e-41  Score=298.53  Aligned_cols=246  Identities=22%  Similarity=0.223  Sum_probs=198.6

Q ss_pred             CCCCCCEEEEecC--CCchHHHHHHHHHHcCCeEEEEecCc--chhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHH
Q 021960           27 RRLEGKVAIITGG--ARGIGEAAVRLFARHGAKVVIADVED--TLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVS  102 (305)
Q Consensus        27 ~~l~~k~vlVtGa--s~giG~~ia~~l~~~g~~vv~~~r~~--~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~  102 (305)
                      .++++|+++||||  ++|||+++|+.|+++|++|++++|+.  ...+.+.+... .++.++.+|++|.++++++++++.+
T Consensus         3 ~~~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~i~~~~~~~~~   81 (256)
T PRK07889          3 GLLEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLP-EPAPVLELDVTNEEHLASLADRVRE   81 (256)
T ss_pred             ccccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcC-CCCcEEeCCCCCHHHHHHHHHHHHH
Confidence            3578999999999  89999999999999999999998764  22333333332 3577899999999999999999999


Q ss_pred             hcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccc
Q 021960          103 RYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAY  182 (305)
Q Consensus       103 ~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y  182 (305)
                      .++++|++|||||.........++.+.++++|++.+++|+.+++++++.++|.|.+  .|+||++||. +..+.+.+..|
T Consensus        82 ~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~--~g~Iv~is~~-~~~~~~~~~~Y  158 (256)
T PRK07889         82 HVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNE--GGSIVGLDFD-ATVAWPAYDWM  158 (256)
T ss_pred             HcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhccc--CceEEEEeec-ccccCCccchh
Confidence            99999999999997632111135667889999999999999999999999999963  4799999875 34556777889


Q ss_pred             hhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCC
Q 021960          183 TASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKG  262 (305)
Q Consensus       183 ~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (305)
                      ++||+|+.+|+++++.|++++||+||+|+||+++|+|.... ..                .++..+..   ..  ..+.+
T Consensus       159 ~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~-~~----------------~~~~~~~~---~~--~~p~~  216 (256)
T PRK07889        159 GVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAI-PG----------------FELLEEGW---DE--RAPLG  216 (256)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhcc-cC----------------cHHHHHHH---Hh--cCccc
Confidence            99999999999999999999999999999999999984321 10                00111111   11  23555


Q ss_pred             -CCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          263 -TTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       263 -~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                       ++.+|+|+|+.++||+++.+.++||+++.+|||++.
T Consensus       217 ~~~~~p~evA~~v~~l~s~~~~~~tG~~i~vdgg~~~  253 (256)
T PRK07889        217 WDVKDPTPVARAVVALLSDWFPATTGEIVHVDGGAHA  253 (256)
T ss_pred             cccCCHHHHHHHHHHHhCcccccccceEEEEcCceec
Confidence             578999999999999999999999999999999764

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=100.00  E-value=1.7e-41  Score=300.84  Aligned_cols=257  Identities=30%  Similarity=0.397  Sum_probs=213.4

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      ..+++|+++||||++|||+++++.|+++|++|++++|+....+.+.+.+  .+.++.++.+|++|.++++.+++++.+.+
T Consensus         6 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   85 (278)
T PRK08277          6 FSLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDF   85 (278)
T ss_pred             eccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            4678999999999999999999999999999999999866554444333  23468899999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCC-----------CCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccc
Q 021960          105 GRLDILYNNAGVLGNQR-----------KHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGV  173 (305)
Q Consensus       105 g~id~li~nag~~~~~~-----------~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~  173 (305)
                      +++|+||||||......           ...++.+.+.++|++.+++|+.+++++++.+++.|.+++.++||++||..+.
T Consensus        86 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~  165 (278)
T PRK08277         86 GPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNAF  165 (278)
T ss_pred             CCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhc
Confidence            99999999999653321           1134667889999999999999999999999999988888999999999999


Q ss_pred             cCCCCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHH
Q 021960          174 MGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEF  253 (305)
Q Consensus       174 ~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (305)
                      .+.++...|+++|++++.++++++.|++++||+||+|+||+++|++...........            ..+..   ...
T Consensus       166 ~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~------------~~~~~---~~~  230 (278)
T PRK08277        166 TPLTKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNEDGS------------LTERA---NKI  230 (278)
T ss_pred             CCCCCCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhhhcccccc------------chhHH---HHH
Confidence            999999999999999999999999999999999999999999999854432211000            00111   111


Q ss_pred             HhhcCCCCCCCCCHHHHHHHHHHhccC-CCCceeccEEEecCCccccc
Q 021960          254 VSGLGNLKGTTLRSKDIAEAALYLASD-ESRYVSGHNLVVDGGVTTSR  300 (305)
Q Consensus       254 ~~~~~~~~~~~~~~~dva~~v~~l~s~-~~~~~tG~~i~idgG~~~~~  300 (305)
                      ..  ..+.+++.+|+|+|+.++||+++ .+.++||++|.+|||++.+.
T Consensus       231 ~~--~~p~~r~~~~~dva~~~~~l~s~~~~~~~tG~~i~vdgG~~~~~  276 (278)
T PRK08277        231 LA--HTPMGRFGKPEELLGTLLWLADEKASSFVTGVVLPVDGGFSAYS  276 (278)
T ss_pred             hc--cCCccCCCCHHHHHHHHHHHcCccccCCcCCCEEEECCCeeccc
Confidence            11  25778999999999999999999 89999999999999987543

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=5.1e-41  Score=294.68  Aligned_cols=245  Identities=33%  Similarity=0.513  Sum_probs=208.4

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      .++++|++|||||++|||+++++.|+++|++|++++|++ ..+.+.+..  .+.++.++.+|++|.++++.+++++.+.+
T Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   89 (258)
T PRK06935         11 FSLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHGT-NWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEF   89 (258)
T ss_pred             ccCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCc-HHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            467899999999999999999999999999999998873 222232222  23568899999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchh
Q 021960          105 GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTA  184 (305)
Q Consensus       105 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~  184 (305)
                      +++|++|||||....    .++.+.+.++|++.+++|+.+++.+++.+++.|.+++.++||++||..+..+.++...|++
T Consensus        90 g~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  165 (258)
T PRK06935         90 GKIDILVNNAGTIRR----APLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGGKFVPAYTA  165 (258)
T ss_pred             CCCCEEEECCCCCCC----CCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccCCCCchhhHH
Confidence            999999999997643    4667788999999999999999999999999998888899999999999989889999999


Q ss_pred             hHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCC
Q 021960          185 SKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT  264 (305)
Q Consensus       185 sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (305)
                      +|++++++++++++|+.++||+||+|+||+++|++.......                 +...+..   ..  ..+.+++
T Consensus       166 sK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~-----------------~~~~~~~---~~--~~~~~~~  223 (258)
T PRK06935        166 SKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRAD-----------------KNRNDEI---LK--RIPAGRW  223 (258)
T ss_pred             HHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhhcccC-----------------hHHHHHH---Hh--cCCCCCC
Confidence            999999999999999999999999999999999975322110                 0111111   11  2467889


Q ss_pred             CCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          265 LRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       265 ~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      .+|+|+++.+.||+++.+++++|+++.+|||...
T Consensus       224 ~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~~  257 (258)
T PRK06935        224 GEPDDLMGAAVFLASRASDYVNGHILAVDGGWLV  257 (258)
T ss_pred             CCHHHHHHHHHHHcChhhcCCCCCEEEECCCeec
Confidence            9999999999999999999999999999999754

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=100.00  E-value=1.8e-42  Score=300.99  Aligned_cols=233  Identities=35%  Similarity=0.516  Sum_probs=199.0

Q ss_pred             cCC--CchHHHHHHHHHHcCCeEEEEecCcchh----hhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhc-CCccEE
Q 021960           38 GGA--RGIGEAAVRLFARHGAKVVIADVEDTLG----SVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRY-GRLDIL  110 (305)
Q Consensus        38 Gas--~giG~~ia~~l~~~g~~vv~~~r~~~~~----~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~-g~id~l  110 (305)
                      |++  +|||+++|+.|+++|++|++++|+.+..    +.+.+.. +  ..++.+|++|.++++++++++.+.+ |+||+|
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~-~--~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~l   77 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEY-G--AEVIQCDLSDEESVEALFDEAVERFGGRIDIL   77 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHT-T--SEEEESCTTSHHHHHHHHHHHHHHHCSSESEE
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHc-C--CceEeecCcchHHHHHHHHHHHhhcCCCeEEE
Confidence            566  9999999999999999999999998763    2222222 2  3359999999999999999999999 999999


Q ss_pred             EEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhHHHHH
Q 021960          111 YNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIV  190 (305)
Q Consensus       111 i~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKaa~~  190 (305)
                      |||+|.........++.+.+.++|++.+++|+.+++.+++++.|+|.+.  ++||++||..+..+.++...|+++|+|++
T Consensus        78 V~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--gsii~iss~~~~~~~~~~~~y~~sKaal~  155 (241)
T PF13561_consen   78 VNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKG--GSIINISSIAAQRPMPGYSAYSASKAALE  155 (241)
T ss_dssp             EEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHE--EEEEEEEEGGGTSBSTTTHHHHHHHHHHH
T ss_pred             EecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC--CCcccccchhhcccCccchhhHHHHHHHH
Confidence            9999987642233677888999999999999999999999999988554  89999999999999999999999999999


Q ss_pred             HHHHHHHHHHCc-CCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCCHHH
Q 021960          191 GLTKNAACELGR-YGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSKD  269 (305)
Q Consensus       191 ~~~~~la~e~~~-~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  269 (305)
                      +|+|++|.|+++ +|||||+|+||+++|++.......                 ++..+..    .. ..|.+++.+|+|
T Consensus       156 ~l~r~lA~el~~~~gIrVN~V~pG~i~t~~~~~~~~~-----------------~~~~~~~----~~-~~pl~r~~~~~e  213 (241)
T PF13561_consen  156 GLTRSLAKELAPKKGIRVNAVSPGPIETPMTERIPGN-----------------EEFLEEL----KK-RIPLGRLGTPEE  213 (241)
T ss_dssp             HHHHHHHHHHGGHGTEEEEEEEESSBSSHHHHHHHTH-----------------HHHHHHH----HH-HSTTSSHBEHHH
T ss_pred             HHHHHHHHHhccccCeeeeeecccceeccchhccccc-----------------cchhhhh----hh-hhccCCCcCHHH
Confidence            999999999999 999999999999999985433211                 1111111    11 378899999999


Q ss_pred             HHHHHHHhccCCCCceeccEEEecCCcc
Q 021960          270 IAEAALYLASDESRYVSGHNLVVDGGVT  297 (305)
Q Consensus       270 va~~v~~l~s~~~~~~tG~~i~idgG~~  297 (305)
                      ||+.+.||+|+.++++|||+|.+|||++
T Consensus       214 vA~~v~fL~s~~a~~itG~~i~vDGG~s  241 (241)
T PF13561_consen  214 VANAVLFLASDAASYITGQVIPVDGGFS  241 (241)
T ss_dssp             HHHHHHHHHSGGGTTGTSEEEEESTTGG
T ss_pred             HHHHHHHHhCccccCccCCeEEECCCcC
Confidence            9999999999999999999999999985

...

>PRK06128 oxidoreductase; Provisional

Probab=100.00  E-value=1.3e-40  Score=298.52  Aligned_cols=244  Identities=30%  Similarity=0.384  Sum_probs=203.9

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcch--hhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHh
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTL--GSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSR  103 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~--~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~  103 (305)
                      .+++|++|||||++|||+++++.|+++|++|+++.++...  .+...+.+  .+.++.++.+|++|.++++++++++.+.
T Consensus        52 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  131 (300)
T PRK06128         52 RLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKE  131 (300)
T ss_pred             ccCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHH
Confidence            4678999999999999999999999999999988765322  22222222  2446888999999999999999999999


Q ss_pred             cCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccch
Q 021960          104 YGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYT  183 (305)
Q Consensus       104 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~  183 (305)
                      ++++|+||||||.....   .++.+.+.++|++.+++|+.+++++++.+++.|.+  .++||++||..++.+.+++..|+
T Consensus       132 ~g~iD~lV~nAg~~~~~---~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~~~iv~~sS~~~~~~~~~~~~Y~  206 (300)
T PRK06128        132 LGGLDILVNIAGKQTAV---KDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPP--GASIINTGSIQSYQPSPTLLDYA  206 (300)
T ss_pred             hCCCCEEEECCcccCCC---CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCc--CCEEEEECCccccCCCCCchhHH
Confidence            99999999999975332   45778899999999999999999999999998843  57999999999999989999999


Q ss_pred             hhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCC
Q 021960          184 ASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGT  263 (305)
Q Consensus       184 ~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (305)
                      ++|+++++|+++++.|+.++||+||+|+||+++|+|.....                . .++..   ..+..  ..+.++
T Consensus       207 asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~~----------------~-~~~~~---~~~~~--~~p~~r  264 (300)
T PRK06128        207 STKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSGG----------------Q-PPEKI---PDFGS--ETPMKR  264 (300)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccCC----------------C-CHHHH---HHHhc--CCCCCC
Confidence            99999999999999999999999999999999999843210                0 01111   11111  357789


Q ss_pred             CCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          264 TLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       264 ~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      +.+|+|+|..++||+++..++++|++|.+|||..+
T Consensus       265 ~~~p~dva~~~~~l~s~~~~~~~G~~~~v~gg~~~  299 (300)
T PRK06128        265 PGQPVEMAPLYVLLASQESSYVTGEVFGVTGGLLL  299 (300)
T ss_pred             CcCHHHHHHHHHHHhCccccCccCcEEeeCCCEeC
Confidence            99999999999999999999999999999999764

>PRK07791 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2e-41  Score=301.81  Aligned_cols=238  Identities=34%  Similarity=0.549  Sum_probs=200.3

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCc---------chhhhHhhhc--CCCCeEEEEecCCCHHHHHHH
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVED---------TLGSVLASTL--APAPVTFVHCDVSLEEDIENL   96 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~---------~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~   96 (305)
                      .+++|++|||||++|||+++++.|+++|++|++++++.         ...+...+.+  .+.++.++.+|++|.++++++
T Consensus         3 ~l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~   82 (286)
T PRK07791          3 LLDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANL   82 (286)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHH
Confidence            46899999999999999999999999999999988764         3333333322  244688899999999999999


Q ss_pred             HHHHHHhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC------CCEEEEeccc
Q 021960           97 INSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRG------GGCIISTASV  170 (305)
Q Consensus        97 ~~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~------~~~iv~isS~  170 (305)
                      ++++.+.+|++|+||||||....    .++.+.+.++|++.+++|+.+++++++.+++.|.++.      .|+||++||.
T Consensus        83 ~~~~~~~~g~id~lv~nAG~~~~----~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~  158 (286)
T PRK07791         83 VDAAVETFGGLDVLVNNAGILRD----RMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSG  158 (286)
T ss_pred             HHHHHHhcCCCCEEEECCCCCCC----CCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCch
Confidence            99999999999999999997643    4677889999999999999999999999999997542      3799999999


Q ss_pred             ccccCCCCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHH
Q 021960          171 AGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKM  250 (305)
Q Consensus       171 ~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (305)
                      ++..+.+++..|+++|+|+++|+++++.|++++||+||+|+|| ++|+|......                       . 
T Consensus       159 ~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~~~~~~~~-----------------------~-  213 (286)
T PRK07791        159 AGLQGSVGQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTRMTETVFA-----------------------E-  213 (286)
T ss_pred             hhCcCCCCchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCCcchhhHH-----------------------H-
Confidence            9999999999999999999999999999999999999999999 78987432110                       0 


Q ss_pred             HHHHhhcCCCCC--CCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          251 EEFVSGLGNLKG--TTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       251 ~~~~~~~~~~~~--~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                        ....  .+.+  +..+|+|+|+.++||+++.++++||++|.+|||+..
T Consensus       214 --~~~~--~~~~~~~~~~pedva~~~~~L~s~~~~~itG~~i~vdgG~~~  259 (286)
T PRK07791        214 --MMAK--PEEGEFDAMAPENVSPLVVWLGSAESRDVTGKVFEVEGGKIS  259 (286)
T ss_pred             --HHhc--CcccccCCCCHHHHHHHHHHHhCchhcCCCCcEEEEcCCceE
Confidence              0000  1122  356899999999999999999999999999999754

>PRK07985 oxidoreductase; Provisional

Probab=100.00  E-value=1e-40  Score=298.29  Aligned_cols=244  Identities=27%  Similarity=0.353  Sum_probs=203.5

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcc--hhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHh
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDT--LGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSR  103 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~--~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~  103 (305)
                      ++++|++|||||++|||+++++.|+++|++|++++|+..  ..+.+.+..  .+.++.++.+|++|.++++++++++.+.
T Consensus        46 ~~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~  125 (294)
T PRK07985         46 RLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKA  125 (294)
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence            578999999999999999999999999999998876432  222222222  2446888999999999999999999999


Q ss_pred             cCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccch
Q 021960          104 YGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYT  183 (305)
Q Consensus       104 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~  183 (305)
                      ++++|++|||||.....   .++.+.+.++|++.+++|+.+++++++.+.+.|.+  .++||++||..+..+.++...|+
T Consensus       126 ~g~id~lv~~Ag~~~~~---~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~--~g~iv~iSS~~~~~~~~~~~~Y~  200 (294)
T PRK07985        126 LGGLDIMALVAGKQVAI---PDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPK--GASIITTSSIQAYQPSPHLLDYA  200 (294)
T ss_pred             hCCCCEEEECCCCCcCC---CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhc--CCEEEEECCchhccCCCCcchhH
Confidence            99999999999964321   45778899999999999999999999999999854  47999999999999988999999


Q ss_pred             hhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCC
Q 021960          184 ASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGT  263 (305)
Q Consensus       184 ~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (305)
                      ++|+++++++++++.|++++||+||+|+||+++|++.....                .+ ++..+   .+..  ..+.++
T Consensus       201 asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~~----------------~~-~~~~~---~~~~--~~~~~r  258 (294)
T PRK07985        201 ATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGG----------------QT-QDKIP---QFGQ--QTPMKR  258 (294)
T ss_pred             HHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCccccccccC----------------CC-HHHHH---HHhc--cCCCCC
Confidence            99999999999999999999999999999999999842110                00 11111   1111  246788


Q ss_pred             CCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          264 TLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       264 ~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      +.+|+|+|+.++||++++++++||++|.+|||+.+
T Consensus       259 ~~~pedva~~~~fL~s~~~~~itG~~i~vdgG~~~  293 (294)
T PRK07985        259 AGQPAELAPVYVYLASQESSYVTAEVHGVCGGEHL  293 (294)
T ss_pred             CCCHHHHHHHHHhhhChhcCCccccEEeeCCCeeC
Confidence            89999999999999999999999999999999764

>PLN02253 xanthoxin dehydrogenase

Probab=100.00  E-value=1e-40  Score=296.22  Aligned_cols=260  Identities=49%  Similarity=0.841  Sum_probs=210.8

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcC-CCCeEEEEecCCCHHHHHHHHHHHHHhcC
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLA-PAPVTFVHCDVSLEEDIENLINSTVSRYG  105 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~-~~~v~~~~~D~~d~~~i~~~~~~~~~~~g  105 (305)
                      ..+++|++|||||++|||++++++|+++|++|++++|+....+...+.+. +.++.++.+|++|.++++++++++.+.++
T Consensus        14 ~~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g   93 (280)
T PLN02253         14 QRLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFG   93 (280)
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhC
Confidence            35789999999999999999999999999999999987655444433332 34688999999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhh
Q 021960          106 RLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTAS  185 (305)
Q Consensus       106 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  185 (305)
                      ++|+||||||.....  ..++.+.+.+++++.+++|+.+++++++++.+.|.+++.|+|+++||.++..+.++...|+++
T Consensus        94 ~id~li~~Ag~~~~~--~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~s  171 (280)
T PLN02253         94 TLDIMVNNAGLTGPP--CPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGLGPHAYTGS  171 (280)
T ss_pred             CCCEEEECCCcCCCC--CCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccCCCCcccHHH
Confidence            999999999975431  135678899999999999999999999999999987778999999999998888888899999


Q ss_pred             HHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCC
Q 021960          186 KHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL  265 (305)
Q Consensus       186 Kaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (305)
                      |+++++++++++.|++.+||+|++|+||+++|++.....+...             ..+.....+..+........++..
T Consensus       172 K~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~l~~~~~  238 (280)
T PLN02253        172 KHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPEDE-------------RTEDALAGFRAFAGKNANLKGVEL  238 (280)
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEeeCccccccccccccccc-------------chhhhhhhhHHHhhcCCCCcCCCC
Confidence            9999999999999999999999999999999997543221100             000111111111111112235567


Q ss_pred             CHHHHHHHHHHhccCCCCceeccEEEecCCcccccc
Q 021960          266 RSKDIAEAALYLASDESRYVSGHNLVVDGGVTTSRN  301 (305)
Q Consensus       266 ~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~~~  301 (305)
                      +|+|+|+.+.||++++.++++|++|.+|||++...+
T Consensus       239 ~~~dva~~~~~l~s~~~~~i~G~~i~vdgG~~~~~~  274 (280)
T PLN02253        239 TVDDVANAVLFLASDEARYISGLNLMIDGGFTCTNH  274 (280)
T ss_pred             CHHHHHHHHHhhcCcccccccCcEEEECCchhhccc
Confidence            999999999999999999999999999999875543

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=100.00  E-value=4.8e-41  Score=289.16  Aligned_cols=224  Identities=28%  Similarity=0.377  Sum_probs=198.2

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcC---CCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLA---PAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      .+.++++||||||+|||.++|++|+++|++|++++|++.++..+.+.+.   +.++.++.+|+++.+++.++.+++.+..
T Consensus         3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~   82 (265)
T COG0300           3 PMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERG   82 (265)
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcC
Confidence            4578999999999999999999999999999999999998888777663   3468899999999999999999999998


Q ss_pred             CCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchh
Q 021960          105 GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTA  184 (305)
Q Consensus       105 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~  184 (305)
                      +.||+||||||+...    +++.+.++++.++++++|+.++..+++.++|.|.+++.|.||+|+|.+++.|.|..+.|++
T Consensus        83 ~~IdvLVNNAG~g~~----g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~p~~avY~A  158 (265)
T COG0300          83 GPIDVLVNNAGFGTF----GPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPTPYMAVYSA  158 (265)
T ss_pred             CcccEEEECCCcCCc----cchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCCCcchHHHHH
Confidence            899999999998754    6889999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCC
Q 021960          185 SKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT  264 (305)
Q Consensus       185 sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (305)
                      ||+++.+|+++|+.|+.++||+|.+|+||++.|+++. . .....                          ....+....
T Consensus       159 TKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~-~-~~~~~--------------------------~~~~~~~~~  210 (265)
T COG0300         159 TKAFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFD-A-KGSDV--------------------------YLLSPGELV  210 (265)
T ss_pred             HHHHHHHHHHHHHHHhcCCCeEEEEEecCcccccccc-c-ccccc--------------------------ccccchhhc
Confidence            9999999999999999999999999999999999964 1 10000                          001233457


Q ss_pred             CCHHHHHHHHHHhccCCCC
Q 021960          265 LRSKDIAEAALYLASDESR  283 (305)
Q Consensus       265 ~~~~dva~~v~~l~s~~~~  283 (305)
                      ++|+++|+.++..+....+
T Consensus       211 ~~~~~va~~~~~~l~~~k~  229 (265)
T COG0300         211 LSPEDVAEAALKALEKGKR  229 (265)
T ss_pred             cCHHHHHHHHHHHHhcCCc
Confidence            7999999999998876443

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.4e-40  Score=291.45  Aligned_cols=244  Identities=34%  Similarity=0.553  Sum_probs=202.1

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcch-hhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcC
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTL-GSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYG  105 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~-~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g  105 (305)
                      ..+.+|+++||||++|||+++|+.|+++|++|+++.++... .+.+.    ..++.++.+|++|.++++++++++.+.++
T Consensus         3 ~~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~----~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   78 (255)
T PRK06463          3 MRFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELR----EKGVFTIKCDVGNRDQVKKSKEVVEKEFG   78 (255)
T ss_pred             CCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHH----hCCCeEEEecCCCHHHHHHHHHHHHHHcC
Confidence            45689999999999999999999999999999887665432 22222    12478899999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEeccccccc-CCCCCccchh
Q 021960          106 RLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVM-GGLGPHAYTA  184 (305)
Q Consensus       106 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~-~~~~~~~Y~~  184 (305)
                      ++|+||||||....    .++.+.+.++|++.+++|+.+++++++.+++.|.+++.++||++||..+.. +.++...|++
T Consensus        79 ~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~a  154 (255)
T PRK06463         79 RVDVLVNNAGIMYL----MPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGTAAEGTTFYAI  154 (255)
T ss_pred             CCCEEEECCCcCCC----CChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCCCCCCccHhHH
Confidence            99999999997533    466778999999999999999999999999999877789999999998874 4467788999


Q ss_pred             hHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCC
Q 021960          185 SKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT  264 (305)
Q Consensus       185 sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (305)
                      +|+|+++|+++++.|+.++||+|++|+||+++|++.......                 ++ .......... ..+.+++
T Consensus       155 sKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~-----------------~~-~~~~~~~~~~-~~~~~~~  215 (255)
T PRK06463        155 TKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKSQ-----------------EE-AEKLRELFRN-KTVLKTT  215 (255)
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhcccCc-----------------cc-hHHHHHHHHh-CCCcCCC
Confidence            999999999999999999999999999999999985432110                 00 0011111111 3567888


Q ss_pred             CCHHHHHHHHHHhccCCCCceeccEEEecCCcc
Q 021960          265 LRSKDIAEAALYLASDESRYVSGHNLVVDGGVT  297 (305)
Q Consensus       265 ~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~  297 (305)
                      .+|+|+|+.++||+++...+++|+++.+|||..
T Consensus       216 ~~~~~va~~~~~l~s~~~~~~~G~~~~~dgg~~  248 (255)
T PRK06463        216 GKPEDIANIVLFLASDDARYITGQVIVADGGRI  248 (255)
T ss_pred             cCHHHHHHHHHHHcChhhcCCCCCEEEECCCee
Confidence            999999999999999999999999999999964

>PRK12747 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-40  Score=290.86  Aligned_cols=241  Identities=29%  Similarity=0.351  Sum_probs=197.9

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cCcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHh--
Q 021960           29 LEGKVAIITGGARGIGEAAVRLFARHGAKVVIAD-VEDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSR--  103 (305)
Q Consensus        29 l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~-r~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~--  103 (305)
                      +++|++|||||++|||+++++.|+++|++|+++. ++....+.....+  .+.++..+.+|++|.++++.+++++.+.  
T Consensus         2 ~~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (252)
T PRK12747          2 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ   81 (252)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhh
Confidence            4689999999999999999999999999998875 4333333222222  2345778999999999999998887653  


Q ss_pred             --cC--CccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCC
Q 021960          104 --YG--RLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGP  179 (305)
Q Consensus       104 --~g--~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~  179 (305)
                        ++  ++|+||||||....    .++.+.+.++|++++++|+.+++++++.+++.|.+  .++||++||.++..+.++.
T Consensus        82 ~~~g~~~id~lv~~Ag~~~~----~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~  155 (252)
T PRK12747         82 NRTGSTKFDILINNAGIGPG----AFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRD--NSRIINISSAATRISLPDF  155 (252)
T ss_pred             hhcCCCCCCEEEECCCcCCC----CCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhc--CCeEEEECCcccccCCCCc
Confidence              34  79999999997532    45677899999999999999999999999999854  4899999999999999999


Q ss_pred             ccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCC
Q 021960          180 HAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGN  259 (305)
Q Consensus       180 ~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (305)
                      ..|++||+++++++++++.|++++||+||+|+||+++|+|..+.+..                  .....   +... ..
T Consensus       156 ~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~------------------~~~~~---~~~~-~~  213 (252)
T PRK12747        156 IAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELLSD------------------PMMKQ---YATT-IS  213 (252)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhcccC------------------HHHHH---HHHh-cC
Confidence            99999999999999999999999999999999999999985432211                  11111   1111 13


Q ss_pred             CCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCcc
Q 021960          260 LKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT  297 (305)
Q Consensus       260 ~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~  297 (305)
                      +.+++.+|+|+|+.+.||+++..++++|++|.+|||..
T Consensus       214 ~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~vdgg~~  251 (252)
T PRK12747        214 AFNRLGEVEDIADTAAFLASPDSRWVTGQLIDVSGGSC  251 (252)
T ss_pred             cccCCCCHHHHHHHHHHHcCccccCcCCcEEEecCCcc
Confidence            56788999999999999999999999999999999975

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=100.00  E-value=1.9e-40  Score=289.21  Aligned_cols=244  Identities=34%  Similarity=0.480  Sum_probs=204.4

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRL  107 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~i  107 (305)
                      ++++|++|||||++|||++++++|+++|++|++++|+............+.++.++.+|++|.+++..+++++.+.++++
T Consensus         2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   81 (248)
T TIGR01832         2 SLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHI   81 (248)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            47899999999999999999999999999999999865321111111123468899999999999999999999999999


Q ss_pred             cEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-CCEEEEecccccccCCCCCccchhhH
Q 021960          108 DILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRG-GGCIISTASVAGVMGGLGPHAYTASK  186 (305)
Q Consensus       108 d~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sK  186 (305)
                      |++|||||....    .++.+.+.++|++.+++|+.+++.+++.+++.|.+++ .++||++||..+..+.++...|+++|
T Consensus        82 d~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK  157 (248)
T TIGR01832        82 DILVNNAGIIRR----ADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGIRVPSYTASK  157 (248)
T ss_pred             CEEEECCCCCCC----CChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCCCCCchhHHHH
Confidence            999999998643    4566788999999999999999999999999997765 68999999999988888889999999


Q ss_pred             HHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCC
Q 021960          187 HAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLR  266 (305)
Q Consensus       187 aa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (305)
                      +++++++++++.|+.++||+|++|+||+++|++.......                 +...   .....  ..+.+++.+
T Consensus       158 aa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~-----------------~~~~---~~~~~--~~~~~~~~~  215 (248)
T TIGR01832       158 HGVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQALRAD-----------------EDRN---AAILE--RIPAGRWGT  215 (248)
T ss_pred             HHHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhccccC-----------------hHHH---HHHHh--cCCCCCCcC
Confidence            9999999999999999999999999999999985432100                 0111   11111  245688999


Q ss_pred             HHHHHHHHHHhccCCCCceeccEEEecCCcc
Q 021960          267 SKDIAEAALYLASDESRYVSGHNLVVDGGVT  297 (305)
Q Consensus       267 ~~dva~~v~~l~s~~~~~~tG~~i~idgG~~  297 (305)
                      |+|+|+.++||+++..++++|+++.+|||+.
T Consensus       216 ~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~  246 (248)
T TIGR01832       216 PDDIGGPAVFLASSASDYVNGYTLAVDGGWL  246 (248)
T ss_pred             HHHHHHHHHHHcCccccCcCCcEEEeCCCEe
Confidence            9999999999999999999999999999975

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK07035 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.1e-40  Score=289.65  Aligned_cols=246  Identities=34%  Similarity=0.488  Sum_probs=209.9

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      +++++|++|||||++|||++++++|+++|++|++++|+....+.+.+.+  .+.++.++.+|++|.++++.+++++.+.+
T Consensus         4 ~~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (252)
T PRK07035          4 FDLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERH   83 (252)
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            3678999999999999999999999999999999999866555444433  23457889999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchh
Q 021960          105 GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTA  184 (305)
Q Consensus       105 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~  184 (305)
                      +++|+||||||.....   .++.+.+.+++++.+++|+.+++++++++++.|.+++.++|+++||..+..+.++++.|++
T Consensus        84 ~~id~li~~ag~~~~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~  160 (252)
T PRK07035         84 GRLDILVNNAAANPYF---GHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSPGDFQGIYSI  160 (252)
T ss_pred             CCCCEEEECCCcCCCC---CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcCCCCCCcchHH
Confidence            9999999999964322   4566788999999999999999999999999998888899999999999999899999999


Q ss_pred             hHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCC
Q 021960          185 SKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT  264 (305)
Q Consensus       185 sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (305)
                      ||+++++++++++.|+.++||+|++|+||+++|++.......                 +...   .....  ..+.++.
T Consensus       161 sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~~~~-----------------~~~~---~~~~~--~~~~~~~  218 (252)
T PRK07035        161 TKAAVISMTKAFAKECAPFGIRVNALLPGLTDTKFASALFKN-----------------DAIL---KQALA--HIPLRRH  218 (252)
T ss_pred             HHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCcccccccCC-----------------HHHH---HHHHc--cCCCCCc
Confidence            999999999999999999999999999999999985432211                 1111   11111  2457788


Q ss_pred             CCHHHHHHHHHHhccCCCCceeccEEEecCCcc
Q 021960          265 LRSKDIAEAALYLASDESRYVSGHNLVVDGGVT  297 (305)
Q Consensus       265 ~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~  297 (305)
                      .+|+|+|+.++||+++...+++|+++.+|||++
T Consensus       219 ~~~~~va~~~~~l~~~~~~~~~g~~~~~dgg~~  251 (252)
T PRK07035        219 AEPSEMAGAVLYLASDASSYTTGECLNVDGGYL  251 (252)
T ss_pred             CCHHHHHHHHHHHhCccccCccCCEEEeCCCcC
Confidence            999999999999999999999999999999975

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=100.00  E-value=6.6e-41  Score=294.76  Aligned_cols=254  Identities=33%  Similarity=0.451  Sum_probs=205.1

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRL  107 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~i  107 (305)
                      .+++|++|||||++|||+++++.|+++|++|++++|+....+.+.+.. +.++.++.+|++|.++++++++++.+.++++
T Consensus         3 ~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   81 (263)
T PRK06200          3 WLHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRF-GDHVLVVEGDVTSYADNQRAVDQTVDAFGKL   81 (263)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-CCcceEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            367899999999999999999999999999999999876665554443 3457889999999999999999999999999


Q ss_pred             cEEEEcCCCCCCCCCCCcccCCCHHH----HHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccch
Q 021960          108 DILYNNAGVLGNQRKHKSIIDFDADE----FDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYT  183 (305)
Q Consensus       108 d~li~nag~~~~~~~~~~~~~~~~~~----~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~  183 (305)
                      |+||||||.....   .++.+.+.++    |++++++|+.+++.+++.+++.|.++ .++||++||..+..+.++...|+
T Consensus        82 d~li~~ag~~~~~---~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~~~~~~~~Y~  157 (263)
T PRK06200         82 DCFVGNAGIWDYN---TSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKAS-GGSMIFTLSNSSFYPGGGGPLYT  157 (263)
T ss_pred             CEEEECCCCcccC---CCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhc-CCEEEEECChhhcCCCCCCchhH
Confidence            9999999975321   3444555554    88999999999999999999998654 48999999999999888889999


Q ss_pred             hhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCC
Q 021960          184 ASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGT  263 (305)
Q Consensus       184 ~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (305)
                      ++|+++++|+++++.|+++. |+||+|+||+++|+|............      ....+  +..+.+    .. ..|.++
T Consensus       158 ~sK~a~~~~~~~la~el~~~-Irvn~i~PG~i~t~~~~~~~~~~~~~~------~~~~~--~~~~~~----~~-~~p~~r  223 (263)
T PRK06200        158 ASKHAVVGLVRQLAYELAPK-IRVNGVAPGGTVTDLRGPASLGQGETS------ISDSP--GLADMI----AA-ITPLQF  223 (263)
T ss_pred             HHHHHHHHHHHHHHHHHhcC-cEEEEEeCCccccCCcCccccCCCCcc------ccccc--chhHHh----hc-CCCCCC
Confidence            99999999999999999874 999999999999998532211100000      00001  011111    11 257789


Q ss_pred             CCCHHHHHHHHHHhccCC-CCceeccEEEecCCccccc
Q 021960          264 TLRSKDIAEAALYLASDE-SRYVSGHNLVVDGGVTTSR  300 (305)
Q Consensus       264 ~~~~~dva~~v~~l~s~~-~~~~tG~~i~idgG~~~~~  300 (305)
                      +.+|+|+|+.+.||+++. +.++||++|.+|||+++..
T Consensus       224 ~~~~~eva~~~~fl~s~~~~~~itG~~i~vdgG~~~~~  261 (263)
T PRK06200        224 APQPEDHTGPYVLLASRRNSRALTGVVINADGGLGIRG  261 (263)
T ss_pred             CCCHHHHhhhhhheecccccCcccceEEEEcCceeecc
Confidence            999999999999999998 9999999999999987543

>PRK06172 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.1e-40  Score=289.79  Aligned_cols=248  Identities=41%  Similarity=0.644  Sum_probs=210.8

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      ..+++|++|||||++|||++++++|+++|++|++++|+....+...+.+  .+.++.++.+|++|.++++++++++.+.+
T Consensus         3 ~~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   82 (253)
T PRK06172          3 MTFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAY   82 (253)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            3578999999999999999999999999999999999876544433332  23468899999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchh
Q 021960          105 GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTA  184 (305)
Q Consensus       105 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~  184 (305)
                      +++|+||||+|.....   .++.+.+.+++++.+++|+.+++.+++++++.|.+++.+++|++||..+..+.+++..|++
T Consensus        83 g~id~li~~ag~~~~~---~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~  159 (253)
T PRK06172         83 GRLDYAFNNAGIEIEQ---GRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGAAPKMSIYAA  159 (253)
T ss_pred             CCCCEEEECCCCCCCC---CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCCCCchhHH
Confidence            9999999999975432   3466789999999999999999999999999998887889999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCC
Q 021960          185 SKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT  264 (305)
Q Consensus       185 sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (305)
                      +|+++++|+++++.|+.++||+|++|+||+++|++.......                .++..+.+   ..  ..+.++.
T Consensus       160 sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~~~----------------~~~~~~~~---~~--~~~~~~~  218 (253)
T PRK06172        160 SKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYEA----------------DPRKAEFA---AA--MHPVGRI  218 (253)
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhccc----------------ChHHHHHH---hc--cCCCCCc
Confidence            999999999999999999999999999999999986543211                01111111   11  2466788


Q ss_pred             CCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          265 LRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       265 ~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      .+|+|+++.++||+++...+++|++|.+|||++.
T Consensus       219 ~~p~~ia~~~~~l~~~~~~~~~G~~i~~dgg~~~  252 (253)
T PRK06172        219 GKVEEVASAVLYLCSDGASFTTGHALMVDGGATA  252 (253)
T ss_pred             cCHHHHHHHHHHHhCccccCcCCcEEEECCCccC
Confidence            9999999999999999999999999999999753

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=2.8e-40  Score=289.46  Aligned_cols=246  Identities=31%  Similarity=0.439  Sum_probs=211.2

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcC--CCCeEEEEecCCCHHHHHHHHHHHHHhcC
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLA--PAPVTFVHCDVSLEEDIENLINSTVSRYG  105 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~--~~~v~~~~~D~~d~~~i~~~~~~~~~~~g  105 (305)
                      ++++|++|||||+++||++++++|+++|++|++++|++...+...+.+.  +.++.++.+|++|.++++++++++.+.++
T Consensus         7 ~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   86 (255)
T PRK07523          7 DLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIG   86 (255)
T ss_pred             CCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence            5789999999999999999999999999999999998765544433332  34588999999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhh
Q 021960          106 RLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTAS  185 (305)
Q Consensus       106 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  185 (305)
                      ++|+||||||....    .++.+.+.++|++.+++|+.+++++++.+.+.|.+++.++||++||..+..+.++...|+++
T Consensus        87 ~~d~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~~s  162 (255)
T PRK07523         87 PIDILVNNAGMQFR----TPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSALARPGIAPYTAT  162 (255)
T ss_pred             CCCEEEECCCCCCC----CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhccCCCCCccHHHH
Confidence            99999999997643    56778899999999999999999999999999988888999999999998888999999999


Q ss_pred             HHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCC
Q 021960          186 KHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL  265 (305)
Q Consensus       186 Kaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (305)
                      |++++.++++++.|++++||+|++|+||+++|++.......                 ....+.+    .. ..+.+++.
T Consensus       163 K~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~-----------------~~~~~~~----~~-~~~~~~~~  220 (255)
T PRK07523        163 KGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVAD-----------------PEFSAWL----EK-RTPAGRWG  220 (255)
T ss_pred             HHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhccC-----------------HHHHHHH----Hh-cCCCCCCc
Confidence            99999999999999999999999999999999985432111                 1111111    11 25678899


Q ss_pred             CHHHHHHHHHHhccCCCCceeccEEEecCCcccc
Q 021960          266 RSKDIAEAALYLASDESRYVSGHNLVVDGGVTTS  299 (305)
Q Consensus       266 ~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~  299 (305)
                      +|+|+|+.++||+++++++++|++|.+|||++.+
T Consensus       221 ~~~dva~~~~~l~~~~~~~~~G~~i~~~gg~~~~  254 (255)
T PRK07523        221 KVEELVGACVFLASDASSFVNGHVLYVDGGITAS  254 (255)
T ss_pred             CHHHHHHHHHHHcCchhcCccCcEEEECCCeecc
Confidence            9999999999999999999999999999998654

>PRK06841 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.9e-40  Score=289.15  Aligned_cols=243  Identities=40%  Similarity=0.577  Sum_probs=209.2

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRL  107 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~i  107 (305)
                      ++.+|++|||||+++||.++++.|+++|++|++++|+....... ....+.++.++.+|++|.++++++++++.+.++++
T Consensus        12 ~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~-~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   90 (255)
T PRK06841         12 DLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVA-AQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRI   90 (255)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            57899999999999999999999999999999999986543322 23334557789999999999999999999999999


Q ss_pred             cEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhHH
Q 021960          108 DILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKH  187 (305)
Q Consensus       108 d~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKa  187 (305)
                      |+||||||....    .++.+.+.+++++.+++|+.+++++++.+.+.|.+++.++||++||..+..+.+....|+++|+
T Consensus        91 d~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~  166 (255)
T PRK06841         91 DILVNSAGVALL----APAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVALERHVAYCASKA  166 (255)
T ss_pred             CEEEECCCCCCC----CChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccCCCCCchHHHHHH
Confidence            999999997643    4566788999999999999999999999999998878899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCCH
Q 021960          188 AIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRS  267 (305)
Q Consensus       188 a~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (305)
                      ++++++++++.|++++||+|++|+||+++|++....+..                  +..+..   ..  ..+.+++.+|
T Consensus       167 a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~------------------~~~~~~---~~--~~~~~~~~~~  223 (255)
T PRK06841        167 GVVGMTKVLALEWGPYGITVNAISPTVVLTELGKKAWAG------------------EKGERA---KK--LIPAGRFAYP  223 (255)
T ss_pred             HHHHHHHHHHHHHHhhCeEEEEEEeCcCcCcccccccch------------------hHHHHH---Hh--cCCCCCCcCH
Confidence            999999999999999999999999999999986543321                  111111   11  2567889999


Q ss_pred             HHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          268 KDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       268 ~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      +|+++.+++|+++.+++++|+++.+|||+.+
T Consensus       224 ~~va~~~~~l~~~~~~~~~G~~i~~dgg~~~  254 (255)
T PRK06841        224 EEIAAAALFLASDAAAMITGENLVIDGGYTI  254 (255)
T ss_pred             HHHHHHHHHHcCccccCccCCEEEECCCccC
Confidence            9999999999999999999999999999754

>PRK07831 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4e-40  Score=289.65  Aligned_cols=243  Identities=34%  Similarity=0.526  Sum_probs=207.2

Q ss_pred             CCCCCCEEEEecCCC-chHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc----CCCCeEEEEecCCCHHHHHHHHHHHH
Q 021960           27 RRLEGKVAIITGGAR-GIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL----APAPVTFVHCDVSLEEDIENLINSTV  101 (305)
Q Consensus        27 ~~l~~k~vlVtGas~-giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~----~~~~v~~~~~D~~d~~~i~~~~~~~~  101 (305)
                      ..+++|++|||||+| |||+++++.|+++|++|++++|+....+...+.+    ...++.++.+|++|.++++++++++.
T Consensus        13 ~~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   92 (262)
T PRK07831         13 GLLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAV   92 (262)
T ss_pred             cccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHH
Confidence            355789999999985 9999999999999999999998766554443322    23468899999999999999999999


Q ss_pred             HhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-CCEEEEecccccccCCCCCc
Q 021960          102 SRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRG-GGCIISTASVAGVMGGLGPH  180 (305)
Q Consensus       102 ~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~  180 (305)
                      +.++++|+||||||....    ..+.+.+.++|++.+++|+.+++.+++.+++.|..+. .++|+++||..+..+.++..
T Consensus        93 ~~~g~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~  168 (262)
T PRK07831         93 ERLGRLDVLVNNAGLGGQ----TPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRAQHGQA  168 (262)
T ss_pred             HHcCCCCEEEECCCCCCC----CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCCc
Confidence            999999999999997543    5677889999999999999999999999999998776 78999999999998888999


Q ss_pred             cchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCC
Q 021960          181 AYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNL  260 (305)
Q Consensus       181 ~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (305)
                      .|+++|+++++++++++.|++++||+|++|+||+++|++.....                  .++..+.+.   .  ..+
T Consensus       169 ~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~~------------------~~~~~~~~~---~--~~~  225 (262)
T PRK07831        169 HYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKVT------------------SAELLDELA---A--REA  225 (262)
T ss_pred             chHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCccccccc------------------CHHHHHHHH---h--cCC
Confidence            99999999999999999999999999999999999999853210                  012222221   1  246


Q ss_pred             CCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCc
Q 021960          261 KGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGV  296 (305)
Q Consensus       261 ~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~  296 (305)
                      .++..+|+|+|+.++||+++.++++||++|.+|+++
T Consensus       226 ~~r~~~p~~va~~~~~l~s~~~~~itG~~i~v~~~~  261 (262)
T PRK07831        226 FGRAAEPWEVANVIAFLASDYSSYLTGEVVSVSSQH  261 (262)
T ss_pred             CCCCcCHHHHHHHHHHHcCchhcCcCCceEEeCCCC
Confidence            788999999999999999999999999999999976

>PRK08643 acetoin reductase; Validated

Probab=100.00  E-value=4.1e-40  Score=288.44  Aligned_cols=251  Identities=33%  Similarity=0.517  Sum_probs=208.4

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcC--CCCeEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 021960           31 GKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLA--PAPVTFVHCDVSLEEDIENLINSTVSRYGRLD  108 (305)
Q Consensus        31 ~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~--~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id  108 (305)
                      +|++|||||++|||+++++.|+++|++|++++|+....+.....+.  +.++.++.+|++|.++++++++++.+.++++|
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   81 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLN   81 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            6899999999999999999999999999999998765554443332  34688899999999999999999999999999


Q ss_pred             EEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-CCEEEEecccccccCCCCCccchhhHH
Q 021960          109 ILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRG-GGCIISTASVAGVMGGLGPHAYTASKH  187 (305)
Q Consensus       109 ~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sKa  187 (305)
                      +||||||....    .++.+.+.+++++.+++|+.+++++++.+++.|.+.+ .++||++||..+..+.++...|+++|+
T Consensus        82 ~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~  157 (256)
T PRK08643         82 VVVNNAGVAPT----TPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGNPELAVYSSTKF  157 (256)
T ss_pred             EEEECCCCCCC----CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCCCCCchhHHHHH
Confidence            99999997543    4567788999999999999999999999999987654 579999999999999889999999999


Q ss_pred             HHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCCH
Q 021960          188 AIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRS  267 (305)
Q Consensus       188 a~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (305)
                      +++.+++.++.|+.++||+|++|+||+++|++..+......        .....+.+....   .+..  ..+.+++.++
T Consensus       158 a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~--------~~~~~~~~~~~~---~~~~--~~~~~~~~~~  224 (256)
T PRK08643        158 AVRGLTQTAARDLASEGITVNAYAPGIVKTPMMFDIAHQVG--------ENAGKPDEWGME---QFAK--DITLGRLSEP  224 (256)
T ss_pred             HHHHHHHHHHHHhcccCcEEEEEeeCCCcChhhhHHHhhhc--------cccCCCchHHHH---HHhc--cCCCCCCcCH
Confidence            99999999999999999999999999999998654321100        001111111111   1111  2467888999


Q ss_pred             HHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          268 KDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       268 ~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      +|+|+.+.||+++.+++++|++|.+|||++.
T Consensus       225 ~~va~~~~~L~~~~~~~~~G~~i~vdgg~~~  255 (256)
T PRK08643        225 EDVANCVSFLAGPDSDYITGQTIIVDGGMVF  255 (256)
T ss_pred             HHHHHHHHHHhCccccCccCcEEEeCCCeec
Confidence            9999999999999999999999999999764

>PRK06523 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.3e-40  Score=288.38  Aligned_cols=255  Identities=26%  Similarity=0.371  Sum_probs=208.6

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcC
Q 021960           26 HRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYG  105 (305)
Q Consensus        26 ~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g  105 (305)
                      ..+++||++|||||++|||+++++.|+++|++|++++|+....       ...++.++.+|++|.++++++++++.+.++
T Consensus         4 ~~~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   76 (260)
T PRK06523          4 FLELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD-------LPEGVEFVAADLTTAEGCAAVARAVLERLG   76 (260)
T ss_pred             CcCCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh-------cCCceeEEecCCCCHHHHHHHHHHHHHHcC
Confidence            3467899999999999999999999999999999999875421       123578899999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCC-CCccchh
Q 021960          106 RLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGL-GPHAYTA  184 (305)
Q Consensus       106 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~-~~~~Y~~  184 (305)
                      ++|+||||||.....  ...+.+.+.++|++.+++|+.+++.+++.+++.|.+++.++||++||..+..+.+ +...|++
T Consensus        77 ~id~vi~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~~Y~~  154 (260)
T PRK06523         77 GVDILVHVLGGSSAP--AGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLPLPESTTAYAA  154 (260)
T ss_pred             CCCEEEECCcccccC--CCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCCCcchhHH
Confidence            999999999964321  1456678899999999999999999999999999888789999999999988765 7889999


Q ss_pred             hHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCC
Q 021960          185 SKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT  264 (305)
Q Consensus       185 sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (305)
                      +|++++.++++++.|++++||++++|+||+++|++.........        .....+.++..+.+.....  ..|.++.
T Consensus       155 sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~--~~p~~~~  224 (260)
T PRK06523        155 AKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAVALAERLA--------EAAGTDYEGAKQIIMDSLG--GIPLGRP  224 (260)
T ss_pred             HHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccHHHHHHHHH--------hhcCCCHHHHHHHHHHHhc--cCccCCC
Confidence            99999999999999999999999999999999998643321100        0011111222222222111  2567888


Q ss_pred             CCHHHHHHHHHHhccCCCCceeccEEEecCCcccc
Q 021960          265 LRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTS  299 (305)
Q Consensus       265 ~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~  299 (305)
                      .+|+|+|+.+.||++++.++++|+++.+|||...+
T Consensus       225 ~~~~~va~~~~~l~s~~~~~~~G~~~~vdgg~~~~  259 (260)
T PRK06523        225 AEPEEVAELIAFLASDRAASITGTEYVIDGGTVPT  259 (260)
T ss_pred             CCHHHHHHHHHHHhCcccccccCceEEecCCccCC
Confidence            99999999999999999999999999999997543

>PRK06125 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.8e-40  Score=289.31  Aligned_cols=252  Identities=27%  Similarity=0.357  Sum_probs=207.5

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc---CCCCeEEEEecCCCHHHHHHHHHHHHHh
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL---APAPVTFVHCDVSLEEDIENLINSTVSR  103 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~---~~~~v~~~~~D~~d~~~i~~~~~~~~~~  103 (305)
                      +++++|++||||+++|||+++++.|+++|++|++++|+....+...+.+   .+.++.++.+|++|.+++++++++    
T Consensus         3 ~~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~----   78 (259)
T PRK06125          3 LHLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAE----   78 (259)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHH----
Confidence            3568999999999999999999999999999999999876555443333   244688999999999999888764    


Q ss_pred             cCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccch
Q 021960          104 YGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYT  183 (305)
Q Consensus       104 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~  183 (305)
                      ++++|++|||||....    .++.+.+.++|++.+++|+.+++++++++++.|.+++.++||++||..+..+.+.+..|+
T Consensus        79 ~g~id~lv~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~  154 (259)
T PRK06125         79 AGDIDILVNNAGAIPG----GGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGENPDADYICGS  154 (259)
T ss_pred             hCCCCEEEECCCCCCC----CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCccccCCCCCchHhH
Confidence            4789999999997643    567789999999999999999999999999999887778999999999988888888999


Q ss_pred             hhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCC
Q 021960          184 ASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGT  263 (305)
Q Consensus       184 ~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (305)
                      ++|+++++++++++.|+.++||+||+|+||+++|++..........         ......+..+   .+..  ..+.++
T Consensus       155 ask~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~---------~~~~~~~~~~---~~~~--~~~~~~  220 (259)
T PRK06125        155 AGNAALMAFTRALGGKSLDDGVRVVGVNPGPVATDRMLTLLKGRAR---------AELGDESRWQ---ELLA--GLPLGR  220 (259)
T ss_pred             HHHHHHHHHHHHHHHHhCccCeEEEEEecCccccHHHHHHHHhhhh---------cccCCHHHHH---HHhc--cCCcCC
Confidence            9999999999999999999999999999999999975443221000         0011111111   1211  246678


Q ss_pred             CCCHHHHHHHHHHhccCCCCceeccEEEecCCccccc
Q 021960          264 TLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTSR  300 (305)
Q Consensus       264 ~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~~  300 (305)
                      +.+|+|+|+.++||+++.+++++|++|.+|||+.+..
T Consensus       221 ~~~~~~va~~~~~l~~~~~~~~~G~~i~vdgg~~~~~  257 (259)
T PRK06125        221 PATPEEVADLVAFLASPRSGYTSGTVVTVDGGISARG  257 (259)
T ss_pred             CcCHHHHHHHHHHHcCchhccccCceEEecCCeeecC
Confidence            8999999999999999999999999999999987654

>PRK07856 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.7e-40  Score=286.24  Aligned_cols=239  Identities=33%  Similarity=0.445  Sum_probs=204.4

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCC
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGR  106 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~  106 (305)
                      +++++|++|||||++|||+++++.|+++|++|++++|+...      ...+.++.++.+|++|.++++++++++.+.+++
T Consensus         2 ~~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   75 (252)
T PRK07856          2 LDLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE------TVDGRPAEFHAADVRDPDQVAALVDAIVERHGR   75 (252)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh------hhcCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            35789999999999999999999999999999999997643      112345888999999999999999999999999


Q ss_pred             ccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC-CCCEEEEecccccccCCCCCccchhh
Q 021960          107 LDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINR-GGGCIISTASVAGVMGGLGPHAYTAS  185 (305)
Q Consensus       107 id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~isS~~~~~~~~~~~~Y~~s  185 (305)
                      +|+||||||....    ..+.+.+.+++++.+++|+.+++.+++.+.+.|.++ +.++||++||..+..+.++...|+++
T Consensus        76 id~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~s  151 (252)
T PRK07856         76 LDVLVNNAGGSPY----ALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPSPGTAAYGAA  151 (252)
T ss_pred             CCEEEECCCCCCC----CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCCCCCCchhHHH
Confidence            9999999997533    456678899999999999999999999999988764 45899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCC
Q 021960          186 KHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL  265 (305)
Q Consensus       186 Kaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (305)
                      |+++++|++.++.|++++ |++++|+||+++|++....+..                 ++..+.+.   .  ..+.++..
T Consensus       152 K~a~~~l~~~la~e~~~~-i~v~~i~Pg~v~t~~~~~~~~~-----------------~~~~~~~~---~--~~~~~~~~  208 (252)
T PRK07856        152 KAGLLNLTRSLAVEWAPK-VRVNAVVVGLVRTEQSELHYGD-----------------AEGIAAVA---A--TVPLGRLA  208 (252)
T ss_pred             HHHHHHHHHHHHHHhcCC-eEEEEEEeccccChHHhhhccC-----------------HHHHHHHh---h--cCCCCCCc
Confidence            999999999999999887 9999999999999985432211                 11111111   1  25678889


Q ss_pred             CHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          266 RSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       266 ~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      +|+|+|+.++||+++..++++|++|.+|||..+
T Consensus       209 ~p~~va~~~~~L~~~~~~~i~G~~i~vdgg~~~  241 (252)
T PRK07856        209 TPADIAWACLFLASDLASYVSGANLEVHGGGER  241 (252)
T ss_pred             CHHHHHHHHHHHcCcccCCccCCEEEECCCcch
Confidence            999999999999999999999999999999754

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-39  Score=286.27  Aligned_cols=248  Identities=33%  Similarity=0.457  Sum_probs=208.1

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcch-hhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHH
Q 021960           26 HRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTL-GSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVS  102 (305)
Q Consensus        26 ~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~-~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~  102 (305)
                      ..++++|++|||||++|||+++|+.|+++|++|+++.|+... .....+.+  .+.++.++.+|++|.++++++++++.+
T Consensus         2 ~~~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~   81 (261)
T PRK08936          2 YSDLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVK   81 (261)
T ss_pred             ccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHH
Confidence            346789999999999999999999999999999988875432 22222222  245688899999999999999999999


Q ss_pred             hcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-CCEEEEecccccccCCCCCcc
Q 021960          103 RYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRG-GGCIISTASVAGVMGGLGPHA  181 (305)
Q Consensus       103 ~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~  181 (305)
                      .++++|++|||||....    .++.+.+.+++++.+++|+.+++.+++.+++.|.+++ .++||++||..+..+.++...
T Consensus        82 ~~g~id~lv~~ag~~~~----~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~~~~~~~~  157 (261)
T PRK08936         82 EFGTLDVMINNAGIENA----VPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQIPWPLFVH  157 (261)
T ss_pred             HcCCCCEEEECCCCCCC----CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccCCCCCCcc
Confidence            99999999999997644    4566788999999999999999999999999998765 589999999999999999999


Q ss_pred             chhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCC
Q 021960          182 YTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLK  261 (305)
Q Consensus       182 Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (305)
                      |+++|+|+++++++++.|+.++||+|++|+||+++|++..+....                 .+.....   ..  ..+.
T Consensus       158 Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~-----------------~~~~~~~---~~--~~~~  215 (261)
T PRK08936        158 YAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEKFAD-----------------PKQRADV---ES--MIPM  215 (261)
T ss_pred             cHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCccccccCC-----------------HHHHHHH---Hh--cCCC
Confidence            999999999999999999999999999999999999985432111                 1111111   11  2467


Q ss_pred             CCCCCHHHHHHHHHHhccCCCCceeccEEEecCCcccc
Q 021960          262 GTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTS  299 (305)
Q Consensus       262 ~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~  299 (305)
                      +++.+++|+++.+.||+++..++++|+++.+|||+++.
T Consensus       216 ~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~d~g~~~~  253 (261)
T PRK08936        216 GYIGKPEEIAAVAAWLASSEASYVTGITLFADGGMTLY  253 (261)
T ss_pred             CCCcCHHHHHHHHHHHcCcccCCccCcEEEECCCcccC
Confidence            88999999999999999999999999999999998754

>PRK06484 short chain dehydrogenase; Validated

Probab=100.00  E-value=6.8e-40  Score=314.95  Aligned_cols=248  Identities=33%  Similarity=0.471  Sum_probs=212.0

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRL  107 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~i  107 (305)
                      ...+|++|||||++|||+++|+.|+++|++|++++|+....+.+.+.. +.++..+.+|++|.++++++++++.+++|++
T Consensus       266 ~~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i  344 (520)
T PRK06484        266 AESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEAL-GDEHLSVQADITDEAAVESAFAQIQARWGRL  344 (520)
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-CCceeEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            457999999999999999999999999999999999877666555444 3457789999999999999999999999999


Q ss_pred             cEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhHH
Q 021960          108 DILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKH  187 (305)
Q Consensus       108 d~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKa  187 (305)
                      |+||||||.....   .++.+.+.++|++++++|+.+++++++.+++.|  ++.|+||++||.++..+.++...|+++|+
T Consensus       345 d~li~nAg~~~~~---~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~--~~~g~iv~isS~~~~~~~~~~~~Y~asKa  419 (520)
T PRK06484        345 DVLVNNAGIAEVF---KPSLEQSAEDFTRVYDVNLSGAFACARAAARLM--SQGGVIVNLGSIASLLALPPRNAYCASKA  419 (520)
T ss_pred             CEEEECCCCcCCC---CChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHh--ccCCEEEEECchhhcCCCCCCchhHHHHH
Confidence            9999999975332   467778999999999999999999999999999  45689999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCCH
Q 021960          188 AIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRS  267 (305)
Q Consensus       188 a~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (305)
                      ++++|+++++.|++++||+||+|+||+++|+|.......                .....+.+   .+  ..+.+++.+|
T Consensus       420 al~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~----------------~~~~~~~~---~~--~~~~~~~~~~  478 (520)
T PRK06484        420 AVTMLSRSLACEWAPAGIRVNTVAPGYIETPAVLALKAS----------------GRADFDSI---RR--RIPLGRLGDP  478 (520)
T ss_pred             HHHHHHHHHHHHhhhhCeEEEEEEeCCccCchhhhhccc----------------cHHHHHHH---Hh--cCCCCCCcCH
Confidence            999999999999999999999999999999985432111                01111111   11  2466788999


Q ss_pred             HHHHHHHHHhccCCCCceeccEEEecCCccccccc
Q 021960          268 KDIAEAALYLASDESRYVSGHNLVVDGGVTTSRNC  302 (305)
Q Consensus       268 ~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~~~~  302 (305)
                      +|+|+.++||+++..+++||++|.+|||+....++
T Consensus       479 ~dia~~~~~l~s~~~~~~~G~~i~vdgg~~~~~~~  513 (520)
T PRK06484        479 EEVAEAIAFLASPAASYVNGATLTVDGGWTAFGDA  513 (520)
T ss_pred             HHHHHHHHHHhCccccCccCcEEEECCCccCCCCC
Confidence            99999999999999999999999999998776654

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=100.00  E-value=2.2e-40  Score=291.34  Aligned_cols=253  Identities=30%  Similarity=0.463  Sum_probs=201.8

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRL  107 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~i  107 (305)
                      ++++|+++||||++|||+++++.|+++|++|++++|+....+.+.+. .+.++.++.+|++|.++++++++++.+.++++
T Consensus         2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   80 (262)
T TIGR03325         2 RLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAA-HGDAVVGVEGDVRSLDDHKEAVARCVAAFGKI   80 (262)
T ss_pred             CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhh-cCCceEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence            46799999999999999999999999999999999987665554433 23458889999999999999999999999999


Q ss_pred             cEEEEcCCCCCCCCCCCcccCCC----HHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccch
Q 021960          108 DILYNNAGVLGNQRKHKSIIDFD----ADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYT  183 (305)
Q Consensus       108 d~li~nag~~~~~~~~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~  183 (305)
                      |+||||||.....   .++.+.+    .++|++.+++|+.++++++++++|.|.++ ++++|++||..+..+.++...|+
T Consensus        81 d~li~~Ag~~~~~---~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~g~iv~~sS~~~~~~~~~~~~Y~  156 (262)
T TIGR03325        81 DCLIPNAGIWDYS---TALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVAS-RGSVIFTISNAGFYPNGGGPLYT  156 (262)
T ss_pred             CEEEECCCCCccC---CccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhc-CCCEEEEeccceecCCCCCchhH
Confidence            9999999975321   2233333    35799999999999999999999999765 47899999999998888889999


Q ss_pred             hhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCC
Q 021960          184 ASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGT  263 (305)
Q Consensus       184 ~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (305)
                      ++|+++++|+++++.|++++ |+||+|+||+++|+|...........      .....+       ..+.... ..|.++
T Consensus       157 ~sKaa~~~l~~~la~e~~~~-irvn~i~PG~i~t~~~~~~~~~~~~~------~~~~~~-------~~~~~~~-~~p~~r  221 (262)
T TIGR03325       157 AAKHAVVGLVKELAFELAPY-VRVNGVAPGGMSSDLRGPKSLGMADK------SISTVP-------LGDMLKS-VLPIGR  221 (262)
T ss_pred             HHHHHHHHHHHHHHHhhccC-eEEEEEecCCCcCCCccccccccccc------cccccc-------hhhhhhh-cCCCCC
Confidence            99999999999999999887 99999999999999854211000000      000000       0111111 256789


Q ss_pred             CCCHHHHHHHHHHhccC-CCCceeccEEEecCCccccc
Q 021960          264 TLRSKDIAEAALYLASD-ESRYVSGHNLVVDGGVTTSR  300 (305)
Q Consensus       264 ~~~~~dva~~v~~l~s~-~~~~~tG~~i~idgG~~~~~  300 (305)
                      +.+|+|+|+.+.||+++ .+.++||++|.+|||+....
T Consensus       222 ~~~p~eva~~~~~l~s~~~~~~~tG~~i~vdgg~~~~~  259 (262)
T TIGR03325       222 MPDAEEYTGAYVFFATRGDTVPATGAVLNYDGGMGVRG  259 (262)
T ss_pred             CCChHHhhhheeeeecCCCcccccceEEEecCCeeecc
Confidence            99999999999999997 46789999999999976543

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-39  Score=284.84  Aligned_cols=253  Identities=35%  Similarity=0.502  Sum_probs=210.0

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRL  107 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~i  107 (305)
                      .+++|++|||||++|||+++|+.|+++|++|++++|+....+...+.. +.++.++.+|++|.++++++++++.+.++++
T Consensus         3 ~l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (257)
T PRK07067          3 RLQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEI-GPAAIAVSLDVTRQDSIDRIVAAAVERFGGI   81 (257)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHh-CCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            467899999999999999999999999999999999877665554443 3458889999999999999999999999999


Q ss_pred             cEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-CCEEEEecccccccCCCCCccchhhH
Q 021960          108 DILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRG-GGCIISTASVAGVMGGLGPHAYTASK  186 (305)
Q Consensus       108 d~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sK  186 (305)
                      |+||||||....    .++.+.+.+++++.+++|+.+++++++.+++.|.+++ +++||++||..+..+.++...|+++|
T Consensus        82 d~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK  157 (257)
T PRK07067         82 DILFNNAALFDM----APILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGEALVSHYCATK  157 (257)
T ss_pred             CEEEECCCcCCC----CCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCCCCCCchhhhhH
Confidence            999999997643    5677789999999999999999999999999987654 47999999999988989999999999


Q ss_pred             HHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCC
Q 021960          187 HAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLR  266 (305)
Q Consensus       187 aa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (305)
                      ++++.+++.++.|+.++||++++|+||+++|++.........        .....+..+..+.   + .. ..+.+++.+
T Consensus       158 ~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~--------~~~~~~~~~~~~~---~-~~-~~~~~~~~~  224 (257)
T PRK07067        158 AAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQVDALFA--------RYENRPPGEKKRL---V-GE-AVPLGRMGV  224 (257)
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhhhhhhhh--------hccCCCHHHHHHH---H-hh-cCCCCCccC
Confidence            999999999999999999999999999999998543210000        0000111111111   1 11 357789999


Q ss_pred             HHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          267 SKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       267 ~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      |+|+|+.+.||+++..++++|++|++|||...
T Consensus       225 ~~dva~~~~~l~s~~~~~~~g~~~~v~gg~~~  256 (257)
T PRK07067        225 PDDLTGMALFLASADADYIVAQTYNVDGGNWM  256 (257)
T ss_pred             HHHHHHHHHHHhCcccccccCcEEeecCCEeC
Confidence            99999999999999999999999999999654

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.1e-39  Score=284.26  Aligned_cols=238  Identities=29%  Similarity=0.364  Sum_probs=201.6

Q ss_pred             CCCCCEEEEecCC--CchHHHHHHHHHHcCCeEEEEecCc-----------chhhhHhhhc--CCCCeEEEEecCCCHHH
Q 021960           28 RLEGKVAIITGGA--RGIGEAAVRLFARHGAKVVIADVED-----------TLGSVLASTL--APAPVTFVHCDVSLEED   92 (305)
Q Consensus        28 ~l~~k~vlVtGas--~giG~~ia~~l~~~g~~vv~~~r~~-----------~~~~~~~~~~--~~~~v~~~~~D~~d~~~   92 (305)
                      +++||++|||||+  +|||+++|++|+++|++|++++++.           .......+.+  .+.++.++.+|++|.++
T Consensus         3 ~l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~   82 (256)
T PRK12859          3 QLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDA   82 (256)
T ss_pred             CcCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHH
Confidence            5789999999999  4999999999999999999875421           1111111221  24568899999999999


Q ss_pred             HHHHHHHHHHhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEeccccc
Q 021960           93 IENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAG  172 (305)
Q Consensus        93 i~~~~~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~  172 (305)
                      ++++++++.+.++++|+||||||....    .++.+.+.++|++.+++|+.+++++.+++++.|.+++.|+||++||..+
T Consensus        83 i~~~~~~~~~~~g~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~  158 (256)
T PRK12859         83 PKELLNKVTEQLGYPHILVNNAAYSTN----NDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQF  158 (256)
T ss_pred             HHHHHHHHHHHcCCCcEEEECCCCCCC----CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEccccc
Confidence            999999999999999999999997533    5677889999999999999999999999999998877899999999999


Q ss_pred             ccCCCCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHH
Q 021960          173 VMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEE  252 (305)
Q Consensus       173 ~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (305)
                      ..+.+++..|+++|+++++|+++++.|+.++||+|++|+||+++|++..+                      +..+.+  
T Consensus       159 ~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~~----------------------~~~~~~--  214 (256)
T PRK12859        159 QGPMVGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMTE----------------------EIKQGL--  214 (256)
T ss_pred             CCCCCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCCH----------------------HHHHHH--
Confidence            99999999999999999999999999999999999999999999986321                      000001  


Q ss_pred             HHhhcCCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCc
Q 021960          253 FVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGV  296 (305)
Q Consensus       253 ~~~~~~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~  296 (305)
                       ..  ..+.++..+|+|+|+.+.||+++..++++|++|.+|||+
T Consensus       215 -~~--~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~dgg~  255 (256)
T PRK12859        215 -LP--MFPFGRIGEPKDAARLIKFLASEEAEWITGQIIHSEGGF  255 (256)
T ss_pred             -Hh--cCCCCCCcCHHHHHHHHHHHhCccccCccCcEEEeCCCc
Confidence             11  245678889999999999999999999999999999995

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=100.00  E-value=2.9e-39  Score=283.07  Aligned_cols=242  Identities=33%  Similarity=0.468  Sum_probs=206.1

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      +.+++|++|||||++|||+++++.|+++|++|++++|+....+......  .+.++.++.+|++|.++++++++.+.+.+
T Consensus         7 ~~l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   86 (255)
T PRK06113          7 LRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKL   86 (255)
T ss_pred             cCcCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            4578999999999999999999999999999999998766554443332  23468889999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchh
Q 021960          105 GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTA  184 (305)
Q Consensus       105 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~  184 (305)
                      +++|++|||||....    .++ +.+.+++++.+++|+.+++++++++.+.|.+.+.++||++||.++..+.+++..|++
T Consensus        87 ~~~d~li~~ag~~~~----~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~  161 (255)
T PRK06113         87 GKVDILVNNAGGGGP----KPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYAS  161 (255)
T ss_pred             CCCCEEEECCCCCCC----CCC-CCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCCcchhHH
Confidence            999999999997543    233 578899999999999999999999999998777789999999999999889999999


Q ss_pred             hHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCC
Q 021960          185 SKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT  264 (305)
Q Consensus       185 sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (305)
                      +|+++++++++++.++..+||+||+|+||+++|++......                  .+..+.   ...  ..+.+++
T Consensus       162 sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~~~~------------------~~~~~~---~~~--~~~~~~~  218 (255)
T PRK06113        162 SKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVIT------------------PEIEQK---MLQ--HTPIRRL  218 (255)
T ss_pred             HHHHHHHHHHHHHHHhhhhCeEEEEEecccccccccccccC------------------HHHHHH---HHh--cCCCCCC
Confidence            99999999999999999999999999999999998543211                  111111   111  2456788


Q ss_pred             CCHHHHHHHHHHhccCCCCceeccEEEecCCc
Q 021960          265 LRSKDIAEAALYLASDESRYVSGHNLVVDGGV  296 (305)
Q Consensus       265 ~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~  296 (305)
                      .+|+|+++.++||+++...+++|++|.+|||.
T Consensus       219 ~~~~d~a~~~~~l~~~~~~~~~G~~i~~~gg~  250 (255)
T PRK06113        219 GQPQDIANAALFLCSPAASWVSGQILTVSGGG  250 (255)
T ss_pred             cCHHHHHHHHHHHcCccccCccCCEEEECCCc
Confidence            89999999999999999999999999999994

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=100.00  E-value=7.1e-40  Score=288.62  Aligned_cols=254  Identities=30%  Similarity=0.458  Sum_probs=206.0

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRL  107 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~i  107 (305)
                      ++++|++|||||++|||+++++.|+++|++|++++++.....       ..++.++.+|++|.++++++++++.+.++++
T Consensus         6 ~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~-------~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   78 (266)
T PRK06171          6 NLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ-------HENYQFVPTDVSSAEEVNHTVAEIIEKFGRI   78 (266)
T ss_pred             cCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc-------cCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            578999999999999999999999999999999988765432       2357889999999999999999999999999


Q ss_pred             cEEEEcCCCCCCCCC-----CCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccc
Q 021960          108 DILYNNAGVLGNQRK-----HKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAY  182 (305)
Q Consensus       108 d~li~nag~~~~~~~-----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y  182 (305)
                      |+||||||.......     ..++.+.+.++|++.+++|+.+++++++.+.+.|.+++.++||++||..+..+.++...|
T Consensus        79 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  158 (266)
T PRK06171         79 DGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGSEGQSCY  158 (266)
T ss_pred             CEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCCCchh
Confidence            999999997533110     123446789999999999999999999999999988878999999999999998999999


Q ss_pred             hhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccc-cccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCC
Q 021960          183 TASKHAIVGLTKNAACELGRYGIRVNCISPFGVA-TSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLK  261 (305)
Q Consensus       183 ~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (305)
                      +++|+++++++++++.|++++||+||+|+||+++ |++....+....       ....+.+.++.   ...+......|.
T Consensus       159 ~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~~t~~~~~~~~~~~-------~~~~~~~~~~~---~~~~~~~~~~p~  228 (266)
T PRK06171        159 AATKAALNSFTRSWAKELGKHNIRVVGVAPGILEATGLRTPEYEEAL-------AYTRGITVEQL---RAGYTKTSTIPL  228 (266)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccccCCCcChhhhhhh-------ccccCCCHHHH---HhhhcccccccC
Confidence            9999999999999999999999999999999997 665332111100       00001111111   111222113577


Q ss_pred             CCCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          262 GTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       262 ~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      +++.+|+|||+.+.||+++.++++||++|.+|||++.
T Consensus       229 ~r~~~~~eva~~~~fl~s~~~~~itG~~i~vdgg~~~  265 (266)
T PRK06171        229 GRSGKLSEVADLVCYLLSDRASYITGVTTNIAGGKTR  265 (266)
T ss_pred             CCCCCHHHhhhheeeeeccccccceeeEEEecCcccC
Confidence            8999999999999999999999999999999999764

>PRK08226 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.7e-39  Score=284.38  Aligned_cols=251  Identities=36%  Similarity=0.490  Sum_probs=206.9

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc-CCCCeEEEEecCCCHHHHHHHHHHHHHhcCC
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL-APAPVTFVHCDVSLEEDIENLINSTVSRYGR  106 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~-~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~  106 (305)
                      ++++|++|||||++|||+++++.|+++|++|++++|+....+...+.. .+.++.++.+|++|.++++++++++.+.+++
T Consensus         3 ~~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   82 (263)
T PRK08226          3 KLTGKTALITGALQGIGEGIARVFARHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGR   82 (263)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            567899999999999999999999999999999999864322222211 2456889999999999999999999999999


Q ss_pred             ccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEeccccc-ccCCCCCccchhh
Q 021960          107 LDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAG-VMGGLGPHAYTAS  185 (305)
Q Consensus       107 id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~-~~~~~~~~~Y~~s  185 (305)
                      +|+||||||....    .++.+.+.+++++.+++|+.+++.+++.+++.+.+++.++||++||..+ ..+.+++..|+++
T Consensus        83 id~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~Y~~s  158 (263)
T PRK08226         83 IDILVNNAGVCRL----GSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALT  158 (263)
T ss_pred             CCEEEECCCcCCC----CCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcccCCCCcchHHHH
Confidence            9999999997643    5667788999999999999999999999999998777789999999887 4566788899999


Q ss_pred             HHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCC
Q 021960          186 KHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL  265 (305)
Q Consensus       186 Kaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (305)
                      |+++++++++++.|+.++||+|++|+||+++|+|..........           ...++.   ...+..  ..|.+++.
T Consensus       159 K~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~-----------~~~~~~---~~~~~~--~~p~~~~~  222 (263)
T PRK08226        159 KAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNP-----------EDPESV---LTEMAK--AIPLRRLA  222 (263)
T ss_pred             HHHHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhccC-----------CCcHHH---HHHHhc--cCCCCCCC
Confidence            99999999999999999999999999999999986543211000           001111   111111  35678889


Q ss_pred             CHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          266 RSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       266 ~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      +|+|+|+.+.||+++.+++++|++|.+|||.++
T Consensus       223 ~~~~va~~~~~l~~~~~~~~~g~~i~~dgg~~~  255 (263)
T PRK08226        223 DPLEVGELAAFLASDESSYLTGTQNVIDGGSTL  255 (263)
T ss_pred             CHHHHHHHHHHHcCchhcCCcCceEeECCCccc
Confidence            999999999999999999999999999999764

>PRK08303 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-39  Score=292.10  Aligned_cols=246  Identities=21%  Similarity=0.247  Sum_probs=193.5

Q ss_pred             CCCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcc----------hhhhHhhhc--CCCCeEEEEecCCCHHH
Q 021960           25 SHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDT----------LGSVLASTL--APAPVTFVHCDVSLEED   92 (305)
Q Consensus        25 ~~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~----------~~~~~~~~~--~~~~v~~~~~D~~d~~~   92 (305)
                      +..++++|++|||||++|||+++|+.|+++|++|++++|+..          ..+...+.+  .+.++.++.+|++|.++
T Consensus         2 ~~~~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~   81 (305)
T PRK08303          2 MMKPLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQ   81 (305)
T ss_pred             CCcCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHH
Confidence            345688999999999999999999999999999999998732          222222222  23457889999999999


Q ss_pred             HHHHHHHHHHhcCCccEEEEcC-CCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccc
Q 021960           93 IENLINSTVSRYGRLDILYNNA-GVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVA  171 (305)
Q Consensus        93 i~~~~~~~~~~~g~id~li~na-g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~  171 (305)
                      ++++++++.+.+|+||+||||| |.........++.+.+.++|++.+++|+.++++++++++|.|.+++.|+||++||..
T Consensus        82 v~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~~  161 (305)
T PRK08303         82 VRALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDGT  161 (305)
T ss_pred             HHHHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCcc
Confidence            9999999999999999999999 742110011456778899999999999999999999999999877779999999976


Q ss_pred             ccc---CCCCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHH
Q 021960          172 GVM---GGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVR  248 (305)
Q Consensus       172 ~~~---~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (305)
                      +..   +.++...|+++|+|+.+|+++|+.|++++||+||+|+||+++|+|..+.....                ++...
T Consensus       162 ~~~~~~~~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~~~~~~~~~~----------------~~~~~  225 (305)
T PRK08303        162 AEYNATHYRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEMMLDAFGVT----------------EENWR  225 (305)
T ss_pred             ccccCcCCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccHHHHHhhccC----------------ccchh
Confidence            643   23456789999999999999999999999999999999999999854321100                00000


Q ss_pred             HHHHHHhhcCCC-CCCCCCHHHHHHHHHHhccCCC-CceeccEEE
Q 021960          249 KMEEFVSGLGNL-KGTTLRSKDIAEAALYLASDES-RYVSGHNLV  291 (305)
Q Consensus       249 ~~~~~~~~~~~~-~~~~~~~~dva~~v~~l~s~~~-~~~tG~~i~  291 (305)
                         ....  ..+ .++..+|+|+|+.++||++++. .++||++|.
T Consensus       226 ---~~~~--~~p~~~~~~~peevA~~v~fL~s~~~~~~itG~~l~  265 (305)
T PRK08303        226 ---DALA--KEPHFAISETPRYVGRAVAALAADPDVARWNGQSLS  265 (305)
T ss_pred             ---hhhc--cccccccCCCHHHHHHHHHHHHcCcchhhcCCcEEE
Confidence               0000  123 3566789999999999999874 589999876

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=5.3e-40  Score=292.86  Aligned_cols=248  Identities=21%  Similarity=0.261  Sum_probs=191.1

Q ss_pred             CCCCCCCCEEEEecCC--CchHHHHHHHHHHcCCeEEEEecCc---------chhhh--HhhhcCCC-----CeEEEEec
Q 021960           25 SHRRLEGKVAIITGGA--RGIGEAAVRLFARHGAKVVIADVED---------TLGSV--LASTLAPA-----PVTFVHCD   86 (305)
Q Consensus        25 ~~~~l~~k~vlVtGas--~giG~~ia~~l~~~g~~vv~~~r~~---------~~~~~--~~~~~~~~-----~v~~~~~D   86 (305)
                      +..+++||++|||||+  +|||+++|+.|+++|++|++.++.+         .....  ......+.     ++..+.+|
T Consensus         2 ~~~~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d   81 (299)
T PRK06300          2 LKIDLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVPIYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDAS   81 (299)
T ss_pred             CCcCCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccchhhhhhhhcccccccccccccccchhhhhhHHHhhhh
Confidence            3567899999999995  9999999999999999999976431         00000  00000000     01112223


Q ss_pred             CCCH------------------HHHHHHHHHHHHhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHH
Q 021960           87 VSLE------------------EDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALG  148 (305)
Q Consensus        87 ~~d~------------------~~i~~~~~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l  148 (305)
                      +++.                  ++++++++++.+++|++|+||||||....  ...++.+.+.++|++.+++|+.+++++
T Consensus        82 ~~~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~--~~~~~~~~~~e~~~~~~~vNl~g~~~l  159 (299)
T PRK06300         82 FDTPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPE--ISKPLLETSRKGYLAALSTSSYSFVSL  159 (299)
T ss_pred             cCCCEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcc--cCCChhhCCHHHHHHHHHHHhHHHHHH
Confidence            3222                  46999999999999999999999986432  125778899999999999999999999


Q ss_pred             HHHHHHHHHcCCCCEEEEecccccccCCCCCc-cchhhHHHHHHHHHHHHHHHCc-CCcEEEEEeCCccccccchhcccC
Q 021960          149 IKHAARVMINRGGGCIISTASVAGVMGGLGPH-AYTASKHAIVGLTKNAACELGR-YGIRVNCISPFGVATSMLVNAWRN  226 (305)
Q Consensus       149 ~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~-~Y~~sKaa~~~~~~~la~e~~~-~~i~v~~v~PG~v~T~~~~~~~~~  226 (305)
                      +++++|.|.+  .|+||++||..+..+.++.. .|+++|+|+++|+++++.|+++ +||+||+|+||+++|+|.... ..
T Consensus       160 ~~a~~p~m~~--~G~ii~iss~~~~~~~p~~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~T~~~~~~-~~  236 (299)
T PRK06300        160 LSHFGPIMNP--GGSTISLTYLASMRAVPGYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLASRAGKAI-GF  236 (299)
T ss_pred             HHHHHHHhhc--CCeEEEEeehhhcCcCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCccChhhhcc-cc
Confidence            9999999954  47899999999988888765 8999999999999999999987 599999999999999985321 00


Q ss_pred             CCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          227 SGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                                      .++..+.    ... ..+.++..+|+|+++.+.||+++++.++||+++.+|||++.
T Consensus       237 ----------------~~~~~~~----~~~-~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~~~  287 (299)
T PRK06300        237 ----------------IERMVDY----YQD-WAPLPEPMEAEQVGAAAAFLVSPLASAITGETLYVDHGANV  287 (299)
T ss_pred             ----------------cHHHHHH----HHh-cCCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEECCCcce
Confidence                            0111111    111 24667889999999999999999999999999999999765

>PRK09242 tropinone reductase; Provisional

Probab=100.00  E-value=3.9e-39  Score=282.52  Aligned_cols=245  Identities=27%  Similarity=0.394  Sum_probs=210.2

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc----CCCCeEEEEecCCCHHHHHHHHHHHHHh
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL----APAPVTFVHCDVSLEEDIENLINSTVSR  103 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~----~~~~v~~~~~D~~d~~~i~~~~~~~~~~  103 (305)
                      ++.+|++|||||++|||+++++.|+++|++|++++|+.+..+...+.+    .+.++.++.+|++|.++++.+++++.+.
T Consensus         6 ~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   85 (257)
T PRK09242          6 RLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDH   85 (257)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            567999999999999999999999999999999999876655444332    2456889999999999999999999999


Q ss_pred             cCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccch
Q 021960          104 YGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYT  183 (305)
Q Consensus       104 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~  183 (305)
                      ++++|+||||||....    .++.+.+.+++++.+++|+.+++.++++++|.|.+++.++||++||..+..+.++...|+
T Consensus        86 ~g~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~  161 (257)
T PRK09242         86 WDGLHILVNNAGGNIR----KAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHVRSGAPYG  161 (257)
T ss_pred             cCCCCEEEECCCCCCC----CChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCCCCCCcchH
Confidence            9999999999997532    456678999999999999999999999999999887789999999999999988999999


Q ss_pred             hhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCC
Q 021960          184 ASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGT  263 (305)
Q Consensus       184 ~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (305)
                      ++|++++.++++++.|+.++||++++|+||+++|++.......                 ++..+..   ..  ..+.++
T Consensus       162 ~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~~~~-----------------~~~~~~~---~~--~~~~~~  219 (257)
T PRK09242        162 MTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGPLSD-----------------PDYYEQV---IE--RTPMRR  219 (257)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcccccccCC-----------------hHHHHHH---Hh--cCCCCC
Confidence            9999999999999999999999999999999999985433211                 1111111   11  246678


Q ss_pred             CCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          264 TLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       264 ~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      ..+++|+++.+.||+++..++++|+++.+|||...
T Consensus       220 ~~~~~~va~~~~~l~~~~~~~~~g~~i~~~gg~~~  254 (257)
T PRK09242        220 VGEPEEVAAAVAFLCMPAASYITGQCIAVDGGFLR  254 (257)
T ss_pred             CcCHHHHHHHHHHHhCcccccccCCEEEECCCeEe
Confidence            88999999999999998888999999999999654

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=100.00  E-value=4.6e-39  Score=282.43  Aligned_cols=252  Identities=26%  Similarity=0.396  Sum_probs=201.0

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      ..+++|++|||||++|||++++++|+++|++|++++|++... ...+.+  .+.++.++.+|++|.++++++++++.+.+
T Consensus         4 ~~~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (260)
T PRK12823          4 QRFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELVH-EVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAF   82 (260)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchHHH-HHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHc
Confidence            357899999999999999999999999999999999975322 222222  24468889999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchh
Q 021960          105 GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTA  184 (305)
Q Consensus       105 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~  184 (305)
                      +++|+||||||.....   .++.+.+.+++++.+++|+.+++++++.+++.|.+++.++||++||..+..  +....|++
T Consensus        83 ~~id~lv~nAg~~~~~---~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~--~~~~~Y~~  157 (260)
T PRK12823         83 GRIDVLINNVGGTIWA---KPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATRG--INRVPYSA  157 (260)
T ss_pred             CCCeEEEECCccccCC---CChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCccccC--CCCCccHH
Confidence            9999999999964321   567788999999999999999999999999999888788999999987642  35678999


Q ss_pred             hHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHH-HHHHHHhhcCCCCCC
Q 021960          185 SKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVR-KMEEFVSGLGNLKGT  263 (305)
Q Consensus       185 sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  263 (305)
                      +|++++.|+++++.|++++||+|++|+||+++|++.............         . ..... .......  ..+.++
T Consensus       158 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~---------~-~~~~~~~~~~~~~--~~~~~~  225 (260)
T PRK12823        158 AKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQ---------E-KAWYQQIVDQTLD--SSLMKR  225 (260)
T ss_pred             HHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhcccccc---------c-cccHHHHHHHHhc--cCCccc
Confidence            999999999999999999999999999999999873211000000000         0 00001 1111111  356788


Q ss_pred             CCCHHHHHHHHHHhccCCCCceeccEEEecCCc
Q 021960          264 TLRSKDIAEAALYLASDESRYVSGHNLVVDGGV  296 (305)
Q Consensus       264 ~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~  296 (305)
                      +.+|+|+|+.+.||+++...+++|+++.+|||.
T Consensus       226 ~~~~~dva~~~~~l~s~~~~~~~g~~~~v~gg~  258 (260)
T PRK12823        226 YGTIDEQVAAILFLASDEASYITGTVLPVGGGD  258 (260)
T ss_pred             CCCHHHHHHHHHHHcCcccccccCcEEeecCCC
Confidence            899999999999999999899999999999985

>PRK12743 oxidoreductase; Provisional

Probab=100.00  E-value=5e-39  Score=281.78  Aligned_cols=245  Identities=33%  Similarity=0.437  Sum_probs=206.4

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCc-chhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 021960           31 GKVAIITGGARGIGEAAVRLFARHGAKVVIADVED-TLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRYGRL  107 (305)
Q Consensus        31 ~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~-~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~i  107 (305)
                      +|++|||||++|||+++++.|+++|++|+++.++. ...+...+.+  .+.++.++.+|++|.++++++++++.+.++++
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRI   81 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            68999999999999999999999999999886543 3333332222  24568999999999999999999999999999


Q ss_pred             cEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-CCEEEEecccccccCCCCCccchhhH
Q 021960          108 DILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRG-GGCIISTASVAGVMGGLGPHAYTASK  186 (305)
Q Consensus       108 d~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sK  186 (305)
                      |+||||+|....    ..+.+.+.+++++.+++|+.+++++++++.+.|.+++ .++||++||..+..+.++...|+++|
T Consensus        82 d~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK  157 (256)
T PRK12743         82 DVLVNNAGAMTK----APFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHTPLPGASAYTAAK  157 (256)
T ss_pred             CEEEECCCCCCC----CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccCCCCCcchhHHHH
Confidence            999999997643    4566789999999999999999999999999997654 58999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCC
Q 021960          187 HAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLR  266 (305)
Q Consensus       187 aa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (305)
                      +++++++++++.++..+||++++|+||+++|++....                  + .+......     ...+.++..+
T Consensus       158 ~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~------------------~-~~~~~~~~-----~~~~~~~~~~  213 (256)
T PRK12743        158 HALGGLTKAMALELVEHGILVNAVAPGAIATPMNGMD------------------D-SDVKPDSR-----PGIPLGRPGD  213 (256)
T ss_pred             HHHHHHHHHHHHHhhhhCeEEEEEEeCCccCcccccc------------------C-hHHHHHHH-----hcCCCCCCCC
Confidence            9999999999999999999999999999999974321                  0 01111111     1245677889


Q ss_pred             HHHHHHHHHHhccCCCCceeccEEEecCCcccccccc
Q 021960          267 SKDIAEAALYLASDESRYVSGHNLVVDGGVTTSRNCV  303 (305)
Q Consensus       267 ~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~~~~~  303 (305)
                      |+|+++.+.||+++...+++|+++.+|||.....+|+
T Consensus       214 ~~dva~~~~~l~~~~~~~~~G~~~~~dgg~~~~~~~~  250 (256)
T PRK12743        214 THEIASLVAWLCSEGASYTTGQSLIVDGGFMLANPQF  250 (256)
T ss_pred             HHHHHHHHHHHhCccccCcCCcEEEECCCccccCCcc
Confidence            9999999999999999999999999999998877775

>PRK07677 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.9e-39  Score=280.66  Aligned_cols=243  Identities=29%  Similarity=0.434  Sum_probs=202.7

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 021960           31 GKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRYGRLD  108 (305)
Q Consensus        31 ~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id  108 (305)
                      ||++|||||++|||+++++.|+++|++|++++|+....+.+.+.+  .+.++.++.+|++|+++++++++++.+.++++|
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRID   80 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence            589999999999999999999999999999999876554444333  235688999999999999999999999999999


Q ss_pred             EEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC-CCCEEEEecccccccCCCCCccchhhHH
Q 021960          109 ILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINR-GGGCIISTASVAGVMGGLGPHAYTASKH  187 (305)
Q Consensus       109 ~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~isS~~~~~~~~~~~~Y~~sKa  187 (305)
                      +||||||....    .++.+.+.++|++.+++|+.+++++++++++.|.++ ..++||++||..+..+.++...|+++|+
T Consensus        81 ~lI~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sKa  156 (252)
T PRK07677         81 ALINNAAGNFI----CPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKA  156 (252)
T ss_pred             EEEECCCCCCC----CCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCCCCCcchHHHHH
Confidence            99999986432    466788999999999999999999999999998664 3689999999999888888899999999


Q ss_pred             HHHHHHHHHHHHHCc-CCcEEEEEeCCcccccc-chhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCC
Q 021960          188 AIVGLTKNAACELGR-YGIRVNCISPFGVATSM-LVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL  265 (305)
Q Consensus       188 a~~~~~~~la~e~~~-~~i~v~~v~PG~v~T~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (305)
                      ++++|+++++.|+.+ +||+|++|+||+++|+. ....+.                 .++..+.+   .+  ..+.+++.
T Consensus       157 a~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~~~~-----------------~~~~~~~~---~~--~~~~~~~~  214 (252)
T PRK07677        157 GVLAMTRTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWE-----------------SEEAAKRT---IQ--SVPLGRLG  214 (252)
T ss_pred             HHHHHHHHHHHHhCcccCeEEEEEeecccccccccccccC-----------------CHHHHHHH---hc--cCCCCCCC
Confidence            999999999999974 69999999999999643 211111                 11111111   11  24567889


Q ss_pred             CHHHHHHHHHHhccCCCCceeccEEEecCCcccc
Q 021960          266 RSKDIAEAALYLASDESRYVSGHNLVVDGGVTTS  299 (305)
Q Consensus       266 ~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~  299 (305)
                      +|+|+++.+.||+++...+++|+++.+|||..+.
T Consensus       215 ~~~~va~~~~~l~~~~~~~~~g~~~~~~gg~~~~  248 (252)
T PRK07677        215 TPEEIAGLAYFLLSDEAAYINGTCITMDGGQWLN  248 (252)
T ss_pred             CHHHHHHHHHHHcCccccccCCCEEEECCCeecC
Confidence            9999999999999998899999999999997653

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=7.5e-39  Score=280.45  Aligned_cols=246  Identities=30%  Similarity=0.416  Sum_probs=210.6

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHh
Q 021960           26 HRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSR  103 (305)
Q Consensus        26 ~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~  103 (305)
                      +..+++|+++||||+++||+++++.|+++|++|++++|+....+...+.+  .+.++.++.+|++|.+++.++++++.+.
T Consensus         6 ~~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   85 (256)
T PRK06124          6 RFSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAE   85 (256)
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence            44678999999999999999999999999999999999865544433332  2446889999999999999999999999


Q ss_pred             cCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccch
Q 021960          104 YGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYT  183 (305)
Q Consensus       104 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~  183 (305)
                      ++++|++|||+|....    .++.+.+.++|++.+++|+.+++.+.+.+++.|.+++.++||++||..+..+.++...|+
T Consensus        86 ~~~id~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~  161 (256)
T PRK06124         86 HGRLDILVNNVGARDR----RPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVARAGDAVYP  161 (256)
T ss_pred             cCCCCEEEECCCCCCC----CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhccCCCCccHhH
Confidence            9999999999997543    567788999999999999999999999999999888889999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCC
Q 021960          184 ASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGT  263 (305)
Q Consensus       184 ~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (305)
                      ++|++++.+++.++.|+.++||++++|+||+++|++.......                 ++....+.    . ..+.++
T Consensus       162 ~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~-----------------~~~~~~~~----~-~~~~~~  219 (256)
T PRK06124        162 AAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAAMAAD-----------------PAVGPWLA----Q-RTPLGR  219 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhhhccC-----------------hHHHHHHH----h-cCCCCC
Confidence            9999999999999999998999999999999999974322111                 11111111    1 245678


Q ss_pred             CCCHHHHHHHHHHhccCCCCceeccEEEecCCcc
Q 021960          264 TLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT  297 (305)
Q Consensus       264 ~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~  297 (305)
                      +.+++|+++.++||++++.+++||+.+.+|||+.
T Consensus       220 ~~~~~~~a~~~~~l~~~~~~~~~G~~i~~dgg~~  253 (256)
T PRK06124        220 WGRPEEIAGAAVFLASPAASYVNGHVLAVDGGYS  253 (256)
T ss_pred             CCCHHHHHHHHHHHcCcccCCcCCCEEEECCCcc
Confidence            8999999999999999999999999999999975

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=8.6e-39  Score=279.27  Aligned_cols=246  Identities=30%  Similarity=0.409  Sum_probs=201.8

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEec-CcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCC
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADV-EDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGR  106 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r-~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~  106 (305)
                      .+++|++|||||++|||+++++.|+++|++|+++.+ +....+.+.... +.++.++.+|++|.++++++++++.+.++.
T Consensus         2 ~l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   80 (253)
T PRK08642          2 QISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADEL-GDRAIALQADVTDREQVQAMFATATEHFGK   80 (253)
T ss_pred             CCCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHh-CCceEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            457899999999999999999999999999988655 333333333322 246888999999999999999999888887


Q ss_pred             -ccEEEEcCCCCCCCC--CCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccch
Q 021960          107 -LDILYNNAGVLGNQR--KHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYT  183 (305)
Q Consensus       107 -id~li~nag~~~~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~  183 (305)
                       +|++|||||......  ...++.+.+.+++++.+++|+.+++++++.+++.|.+++.++||++||..+..+..+...|+
T Consensus        81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~  160 (253)
T PRK08642         81 PITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQNPVVPYHDYT  160 (253)
T ss_pred             CCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCCccchH
Confidence             999999998642210  11356778999999999999999999999999999877779999999988777777788999


Q ss_pred             hhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCC
Q 021960          184 ASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGT  263 (305)
Q Consensus       184 ~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (305)
                      ++|+++++++++++++++++||+||+|+||+++|++.....                  .++..+.+.   .  ..+.++
T Consensus       161 ~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~~~------------------~~~~~~~~~---~--~~~~~~  217 (253)
T PRK08642        161 TAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASAAT------------------PDEVFDLIA---A--TTPLRK  217 (253)
T ss_pred             HHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhccC------------------CHHHHHHHH---h--cCCcCC
Confidence            99999999999999999999999999999999998532110                  011111111   1  256788


Q ss_pred             CCCHHHHHHHHHHhccCCCCceeccEEEecCCcc
Q 021960          264 TLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT  297 (305)
Q Consensus       264 ~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~  297 (305)
                      +.+|+|+++.+.||+++.+++++|++|.+|||+.
T Consensus       218 ~~~~~~va~~~~~l~~~~~~~~~G~~~~vdgg~~  251 (253)
T PRK08642        218 VTTPQEFADAVLFFASPWARAVTGQNLVVDGGLV  251 (253)
T ss_pred             CCCHHHHHHHHHHHcCchhcCccCCEEEeCCCee
Confidence            9999999999999999999999999999999974

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-38  Score=281.11  Aligned_cols=253  Identities=30%  Similarity=0.457  Sum_probs=211.6

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHh
Q 021960           26 HRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSR  103 (305)
Q Consensus        26 ~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~  103 (305)
                      +.++.+|++|||||++|||++++++|+++|++|++++|+....+...+..  .+.++.++.+|++|.++++.+++++.+.
T Consensus         5 ~~~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   84 (265)
T PRK07097          5 LFSLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKE   84 (265)
T ss_pred             ccCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence            45678999999999999999999999999999999998876554443333  2346889999999999999999999999


Q ss_pred             cCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccch
Q 021960          104 YGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYT  183 (305)
Q Consensus       104 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~  183 (305)
                      ++++|+||||||....    .++.+.+.+++++++++|+.+++.+++.+++.|.+++.++||++||..+..+.+++..|+
T Consensus        85 ~~~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  160 (265)
T PRK07097         85 VGVIDILVNNAGIIKR----IPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGRETVSAYA  160 (265)
T ss_pred             CCCCCEEEECCCCCCC----CCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccCCCCCCccHH
Confidence            9999999999998644    466778999999999999999999999999999888889999999999988888999999


Q ss_pred             hhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCC
Q 021960          184 ASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGT  263 (305)
Q Consensus       184 ~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (305)
                      ++|++++.+++++++|+.++||+|++|+||+++|++...........              + ...+..+... ..+.++
T Consensus       161 ~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~--------------~-~~~~~~~~~~-~~~~~~  224 (265)
T PRK07097        161 AAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQADG--------------S-RHPFDQFIIA-KTPAAR  224 (265)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccchhhhhhccccc--------------c-chhHHHHHHh-cCCccC
Confidence            99999999999999999999999999999999999754321100000              0 0011111111 245678


Q ss_pred             CCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          264 TLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       264 ~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      +.+|+|+|+.+.||+++..++++|+++.+|||...
T Consensus       225 ~~~~~dva~~~~~l~~~~~~~~~g~~~~~~gg~~~  259 (265)
T PRK07097        225 WGDPEDLAGPAVFLASDASNFVNGHILYVDGGILA  259 (265)
T ss_pred             CcCHHHHHHHHHHHhCcccCCCCCCEEEECCCcee
Confidence            88999999999999999889999999999999643

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-38  Score=279.81  Aligned_cols=251  Identities=26%  Similarity=0.406  Sum_probs=207.6

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc----CCCCeEEEEecCCCHHHHHHHHHHHHHhcCC
Q 021960           31 GKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL----APAPVTFVHCDVSLEEDIENLINSTVSRYGR  106 (305)
Q Consensus        31 ~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~----~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~  106 (305)
                      +|++|||||+++||+++++.|+++|++|++++|+....+...+.+    ...++.++.+|++|.++++.+++++.+.+++
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   81 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR   81 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            689999999999999999999999999999999876554443332    1246899999999999999999999999999


Q ss_pred             ccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-CCEEEEecccccccCCCCCccchhh
Q 021960          107 LDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRG-GGCIISTASVAGVMGGLGPHAYTAS  185 (305)
Q Consensus       107 id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~~s  185 (305)
                      +|++|||||....    .++.+.+.++|++.+++|+.+++++++.+++.|.+++ .++||++||..+..+.+....|+++
T Consensus        82 id~vv~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~s  157 (259)
T PRK12384         82 VDLLVYNAGIAKA----AFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAA  157 (259)
T ss_pred             CCEEEECCCcCCC----CCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCCCCCchhHHH
Confidence            9999999997644    4667789999999999999999999999999998776 6899999999888888888999999


Q ss_pred             HHHHHHHHHHHHHHHCcCCcEEEEEeCCcc-ccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCC
Q 021960          186 KHAIVGLTKNAACELGRYGIRVNCISPFGV-ATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT  264 (305)
Q Consensus       186 Kaa~~~~~~~la~e~~~~~i~v~~v~PG~v-~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (305)
                      |+++++++++++.|++++||+|++|+||.+ .|++.....+.        .....+.+.++..+.+   ..  ..+.+++
T Consensus       158 Kaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~---~~--~~~~~~~  224 (259)
T PRK12384        158 KFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQ--------YAKKLGIKPDEVEQYY---ID--KVPLKRG  224 (259)
T ss_pred             HHHHHHHHHHHHHHHHHcCcEEEEEecCCcccchhhhhhhHH--------HHHhcCCChHHHHHHH---HH--hCcccCC
Confidence            999999999999999999999999999975 67764432211        0111122222222222   11  3577889


Q ss_pred             CCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          265 LRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       265 ~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      ++++|+++.++||+++...+++|++|++|||..+
T Consensus       225 ~~~~dv~~~~~~l~~~~~~~~~G~~~~v~~g~~~  258 (259)
T PRK12384        225 CDYQDVLNMLLFYASPKASYCTGQSINVTGGQVM  258 (259)
T ss_pred             CCHHHHHHHHHHHcCcccccccCceEEEcCCEEe
Confidence            9999999999999998888999999999999764

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=3e-39  Score=280.02  Aligned_cols=194  Identities=34%  Similarity=0.425  Sum_probs=173.2

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc----CCCCeEEEEecCCCHHHHHHHHHHHHH
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL----APAPVTFVHCDVSLEEDIENLINSTVS  102 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~----~~~~v~~~~~D~~d~~~i~~~~~~~~~  102 (305)
                      ..++||+|+|||||+|||+++|++|+++|++++++.|...+.+...+++    ...++.+++||++|.++++++++++..
T Consensus         8 e~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~   87 (282)
T KOG1205|consen    8 ERLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIR   87 (282)
T ss_pred             HHhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHH
Confidence            4678999999999999999999999999999988887766666553332    233699999999999999999999999


Q ss_pred             hcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccc
Q 021960          103 RYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAY  182 (305)
Q Consensus       103 ~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y  182 (305)
                      .+|++|+||||||+...    ....+.+.+++.+.+++|+.|++++++.++|.|++++.|+||++||++++.+.|....|
T Consensus        88 ~fg~vDvLVNNAG~~~~----~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P~~~~Y  163 (282)
T KOG1205|consen   88 HFGRVDVLVNNAGISLV----GFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLPFRSIY  163 (282)
T ss_pred             hcCCCCEEEecCccccc----cccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCCccccc
Confidence            99999999999998762    56677888999999999999999999999999999988999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHCcCC--cEEEEEeCCccccccchhccc
Q 021960          183 TASKHAIVGLTKNAACELGRYG--IRVNCISPFGVATSMLVNAWR  225 (305)
Q Consensus       183 ~~sKaa~~~~~~~la~e~~~~~--i~v~~v~PG~v~T~~~~~~~~  225 (305)
                      ++||+|+.+|..+|+.|+.+.+  |++ .|+||+|+|++..+...
T Consensus       164 ~ASK~Al~~f~etLR~El~~~~~~i~i-~V~PG~V~Te~~~~~~~  207 (282)
T KOG1205|consen  164 SASKHALEGFFETLRQELIPLGTIIII-LVSPGPIETEFTGKELL  207 (282)
T ss_pred             chHHHHHHHHHHHHHHHhhccCceEEE-EEecCceeecccchhhc
Confidence            9999999999999999999877  555 99999999998665443

>PRK05717 oxidoreductase; Validated

Probab=100.00  E-value=2.3e-38  Score=277.40  Aligned_cols=246  Identities=29%  Similarity=0.429  Sum_probs=205.6

Q ss_pred             CCCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           25 SHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        25 ~~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      ++++++||++|||||+++||+++|+.|+++|++|++++|+........+.. +.++.++.+|++|.++++++++++.+++
T Consensus         4 ~~~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   82 (255)
T PRK05717          4 PNPGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKAL-GENAWFIAMDVADEAQVAAGVAEVLGQF   82 (255)
T ss_pred             CCcccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHc-CCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence            355778999999999999999999999999999999988765544443333 3458899999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchh
Q 021960          105 GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTA  184 (305)
Q Consensus       105 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~  184 (305)
                      +++|+||||||.....  ..++.+.+.++|++.+++|+.+++++++.+.+.|.++ .++||++||..+..+.++...|++
T Consensus        83 g~id~li~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~ii~~sS~~~~~~~~~~~~Y~~  159 (255)
T PRK05717         83 GRLDALVCNAAIADPH--NTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAH-NGAIVNLASTRARQSEPDTEAYAA  159 (255)
T ss_pred             CCCCEEEECCCcccCC--CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CcEEEEEcchhhcCCCCCCcchHH
Confidence            9999999999976432  1456678999999999999999999999999998654 479999999999999889999999


Q ss_pred             hHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCC
Q 021960          185 SKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT  264 (305)
Q Consensus       185 sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (305)
                      +|++++.++++++.++.. +|+|++|+||+++|++......                   +...   ..... ..+.++.
T Consensus       160 sKaa~~~~~~~la~~~~~-~i~v~~i~Pg~i~t~~~~~~~~-------------------~~~~---~~~~~-~~~~~~~  215 (255)
T PRK05717        160 SKGGLLALTHALAISLGP-EIRVNAVSPGWIDARDPSQRRA-------------------EPLS---EADHA-QHPAGRV  215 (255)
T ss_pred             HHHHHHHHHHHHHHHhcC-CCEEEEEecccCcCCccccccc-------------------hHHH---HHHhh-cCCCCCC
Confidence            999999999999999976 4999999999999987322100                   0000   11111 2466888


Q ss_pred             CCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          265 LRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       265 ~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      .+|+|++..+.|++++...+++|+.+.+|||+++
T Consensus       216 ~~~~~va~~~~~l~~~~~~~~~g~~~~~~gg~~~  249 (255)
T PRK05717        216 GTVEDVAAMVAWLLSRQAGFVTGQEFVVDGGMTR  249 (255)
T ss_pred             cCHHHHHHHHHHHcCchhcCccCcEEEECCCceE
Confidence            9999999999999998888999999999999764

>PRK06940 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-38  Score=282.66  Aligned_cols=233  Identities=28%  Similarity=0.385  Sum_probs=188.8

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 021960           31 GKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRYGRLD  108 (305)
Q Consensus        31 ~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id  108 (305)
                      +|++||||+ +|||+++|+.|+ +|++|++++|+....+...+.+  .+.++.++.+|++|.++++++++++ +.++++|
T Consensus         2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~-~~~g~id   78 (275)
T PRK06940          2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATA-QTLGPVT   78 (275)
T ss_pred             CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHH-HhcCCCC
Confidence            589999998 699999999996 8999999999865544443333  2346888999999999999999988 5678999


Q ss_pred             EEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCC------------
Q 021960          109 ILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGG------------  176 (305)
Q Consensus       109 ~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~------------  176 (305)
                      +||||||...           ..+++++.+++|+.+++++++.+.+.|.+  ++++|++||.++..+.            
T Consensus        79 ~li~nAG~~~-----------~~~~~~~~~~vN~~g~~~l~~~~~~~m~~--~g~iv~isS~~~~~~~~~~~~~~~~~~~  145 (275)
T PRK06940         79 GLVHTAGVSP-----------SQASPEAILKVDLYGTALVLEEFGKVIAP--GGAGVVIASQSGHRLPALTAEQERALAT  145 (275)
T ss_pred             EEEECCCcCC-----------chhhHHHHHHHhhHHHHHHHHHHHHHHhh--CCCEEEEEecccccCcccchhhhccccc
Confidence            9999999641           23568999999999999999999999954  3678899998876542            


Q ss_pred             ------------------CCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhc
Q 021960          177 ------------------LGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMN  238 (305)
Q Consensus       177 ------------------~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~  238 (305)
                                        +++..|++||+|+++++++++.|++++||+||+|+||+++|+|..+.+..            
T Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~~~~~------------  213 (275)
T PRK06940        146 TPTEELLSLPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDELNG------------  213 (275)
T ss_pred             cccccccccccccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchhhhcC------------
Confidence                              24678999999999999999999999999999999999999986432211            


Q ss_pred             cCCCcHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCcccc
Q 021960          239 FGIPSQKEVRKMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTS  299 (305)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~  299 (305)
                         +..+..+.+.   .  ..+.+++.+|+|+|+.++||+|+.++++||++|.+|||.+..
T Consensus       214 ---~~~~~~~~~~---~--~~p~~r~~~peeia~~~~fL~s~~~~~itG~~i~vdgg~~~~  266 (275)
T PRK06940        214 ---PRGDGYRNMF---A--KSPAGRPGTPDEIAALAEFLMGPRGSFITGSDFLVDGGATAS  266 (275)
T ss_pred             ---CchHHHHHHh---h--hCCcccCCCHHHHHHHHHHHcCcccCcccCceEEEcCCeEEE
Confidence               0011111111   1  246788999999999999999999999999999999997654

>PRK06701 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.9e-38  Score=281.11  Aligned_cols=245  Identities=33%  Similarity=0.469  Sum_probs=205.4

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcch-hhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHh
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTL-GSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSR  103 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~-~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~  103 (305)
                      .++++|++|||||++|||++++++|+++|++|++++|+... .+.....+  .+.++.++.+|++|.++++++++++.+.
T Consensus        42 ~~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~  121 (290)
T PRK06701         42 GKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRE  121 (290)
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence            47789999999999999999999999999999999887532 22222222  2456889999999999999999999999


Q ss_pred             cCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccch
Q 021960          104 YGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYT  183 (305)
Q Consensus       104 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~  183 (305)
                      ++++|+||||||.....   .++.+.+.++|.+.+++|+.+++.+++++++.|..  .++||++||..+..+.+++..|+
T Consensus       122 ~~~iD~lI~~Ag~~~~~---~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~--~g~iV~isS~~~~~~~~~~~~Y~  196 (290)
T PRK06701        122 LGRLDILVNNAAFQYPQ---QSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQ--GSAIINTGSITGYEGNETLIDYS  196 (290)
T ss_pred             cCCCCEEEECCcccCCC---CCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhh--CCeEEEEecccccCCCCCcchhH
Confidence            99999999999975432   45677899999999999999999999999998843  47999999999999988999999


Q ss_pred             hhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCC
Q 021960          184 ASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGT  263 (305)
Q Consensus       184 ~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (305)
                      ++|++++.++++++.++.++||+|++|+||+++|++.....                 + .+..+.   +..  ..+.++
T Consensus       197 ~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~~~-----------------~-~~~~~~---~~~--~~~~~~  253 (290)
T PRK06701        197 ATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSDF-----------------D-EEKVSQ---FGS--NTPMQR  253 (290)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCccccccc-----------------C-HHHHHH---HHh--cCCcCC
Confidence            99999999999999999999999999999999999743211                 0 111111   111  246678


Q ss_pred             CCCHHHHHHHHHHhccCCCCceeccEEEecCCcccc
Q 021960          264 TLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTS  299 (305)
Q Consensus       264 ~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~  299 (305)
                      +.+++|+|+.++||+++...+++|++|.+|||+..+
T Consensus       254 ~~~~~dva~~~~~ll~~~~~~~~G~~i~idgg~~~~  289 (290)
T PRK06701        254 PGQPEELAPAYVFLASPDSSYITGQMLHVNGGVIVN  289 (290)
T ss_pred             CcCHHHHHHHHHHHcCcccCCccCcEEEeCCCcccC
Confidence            899999999999999999999999999999997653

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=100.00  E-value=3.2e-38  Score=275.59  Aligned_cols=247  Identities=30%  Similarity=0.417  Sum_probs=208.4

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCC
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGR  106 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~  106 (305)
                      .++++|++|||||+++||++++++|+++|++|++++|+.     ..  ..+.++.++.+|++|.++++++++++.+.+++
T Consensus         4 ~~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~-----~~--~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   76 (252)
T PRK08220          4 MDFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF-----LT--QEDYPFATFVLDVSDAAAVAQVCQRLLAETGP   76 (252)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch-----hh--hcCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            467899999999999999999999999999999999875     11  12345888999999999999999999999999


Q ss_pred             ccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhH
Q 021960          107 LDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASK  186 (305)
Q Consensus       107 id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  186 (305)
                      +|+||||+|....    .++.+.+.+++++.+++|+.+++++++.+.+.|.+++.++||++||..+..+.++...|+++|
T Consensus        77 id~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~sK  152 (252)
T PRK08220         77 LDVLVNAAGILRM----GATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHVPRIGMAAYGASK  152 (252)
T ss_pred             CCEEEECCCcCCC----CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhccCCCCCchhHHHH
Confidence            9999999997643    466778899999999999999999999999999888889999999999988888899999999


Q ss_pred             HHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHH-HHHHHHhhcCCCCCCCC
Q 021960          187 HAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVR-KMEEFVSGLGNLKGTTL  265 (305)
Q Consensus       187 aa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  265 (305)
                      ++++.++++++.|++++||+|++|+||+++|++....+......             ..... ....+..  ..+.+++.
T Consensus       153 ~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~-------------~~~~~~~~~~~~~--~~~~~~~~  217 (252)
T PRK08220        153 AALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGE-------------QQVIAGFPEQFKL--GIPLGKIA  217 (252)
T ss_pred             HHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhccchhhh-------------hhhhhhHHHHHhh--cCCCcccC
Confidence            99999999999999999999999999999999865443221000             00000 0111111  35678899


Q ss_pred             CHHHHHHHHHHhccCCCCceeccEEEecCCcccc
Q 021960          266 RSKDIAEAALYLASDESRYVSGHNLVVDGGVTTS  299 (305)
Q Consensus       266 ~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~  299 (305)
                      +|+|+|+.++||+++...+++|+++.+|||.++.
T Consensus       218 ~~~dva~~~~~l~~~~~~~~~g~~i~~~gg~~~~  251 (252)
T PRK08220        218 RPQEIANAVLFLASDLASHITLQDIVVDGGATLG  251 (252)
T ss_pred             CHHHHHHHHHHHhcchhcCccCcEEEECCCeecC
Confidence            9999999999999999999999999999997653

>PRK07890 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.2e-38  Score=277.57  Aligned_cols=253  Identities=27%  Similarity=0.353  Sum_probs=208.8

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcC--CCCeEEEEecCCCHHHHHHHHHHHHHhcC
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLA--PAPVTFVHCDVSLEEDIENLINSTVSRYG  105 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~--~~~v~~~~~D~~d~~~i~~~~~~~~~~~g  105 (305)
                      .+++|+++||||++|||++++++|+++|++|++++|+....+.+.+.+.  +.++.++.+|++|.++++.+++++.+.++
T Consensus         2 ~l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   81 (258)
T PRK07890          2 LLKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFG   81 (258)
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcC
Confidence            4678999999999999999999999999999999998765554444332  45688999999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhh
Q 021960          106 RLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTAS  185 (305)
Q Consensus       106 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  185 (305)
                      ++|+||||||.....   .++.+.+.+++++.+++|+.+++.+++.+.+.|.+. +++||++||..+..+.++...|+++
T Consensus        82 ~~d~vi~~ag~~~~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~ii~~sS~~~~~~~~~~~~Y~~s  157 (258)
T PRK07890         82 RVDALVNNAFRVPSM---KPLADADFAHWRAVIELNVLGTLRLTQAFTPALAES-GGSIVMINSMVLRHSQPKYGAYKMA  157 (258)
T ss_pred             CccEEEECCccCCCC---CCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC-CCEEEEEechhhccCCCCcchhHHH
Confidence            999999999975432   456678899999999999999999999999988665 3799999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCC
Q 021960          186 KHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL  265 (305)
Q Consensus       186 Kaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (305)
                      |++++.++++++.|+++++|++++|+||++.|++.........        ...+.+.++....+.   +  ..+.+++.
T Consensus       158 K~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~---~--~~~~~~~~  224 (258)
T PRK07890        158 KGALLAASQSLATELGPQGIRVNSVAPGYIWGDPLKGYFRHQA--------GKYGVTVEQIYAETA---A--NSDLKRLP  224 (258)
T ss_pred             HHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHHHhhhcc--------cccCCCHHHHHHHHh---h--cCCccccC
Confidence            9999999999999999999999999999999997543322100        011122222222211   1  24567788


Q ss_pred             CHHHHHHHHHHhccCCCCceeccEEEecCCcc
Q 021960          266 RSKDIAEAALYLASDESRYVSGHNLVVDGGVT  297 (305)
Q Consensus       266 ~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~  297 (305)
                      +++|+++.++|++++..++++|++|.+|||..
T Consensus       225 ~~~dva~a~~~l~~~~~~~~~G~~i~~~gg~~  256 (258)
T PRK07890        225 TDDEVASAVLFLASDLARAITGQTLDVNCGEY  256 (258)
T ss_pred             CHHHHHHHHHHHcCHhhhCccCcEEEeCCccc
Confidence            99999999999999888899999999999964

>PRK06949 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.9e-38  Score=276.03  Aligned_cols=243  Identities=32%  Similarity=0.453  Sum_probs=207.2

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      .++++|+++||||+|+||+++++.|+++|++|++++|+....+.+...+  ...++.++.+|+++.++++++++++.+.+
T Consensus         5 ~~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (258)
T PRK06949          5 INLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEA   84 (258)
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhc
Confidence            4578999999999999999999999999999999999876655444332  23468899999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC--------CCEEEEecccccccCC
Q 021960          105 GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRG--------GGCIISTASVAGVMGG  176 (305)
Q Consensus       105 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--------~~~iv~isS~~~~~~~  176 (305)
                      +++|++|||+|....    .++.+.+.++++.++++|+.+++.+++++.+.|.++.        .+++|++||..+..+.
T Consensus        85 ~~~d~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~  160 (258)
T PRK06949         85 GTIDILVNNSGVSTT----QKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVL  160 (258)
T ss_pred             CCCCEEEECCCCCCC----CCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCCC
Confidence            999999999997543    4566778899999999999999999999999987553        4799999999998888


Q ss_pred             CCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhh
Q 021960          177 LGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSG  256 (305)
Q Consensus       177 ~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (305)
                      +....|+++|++++.++++++.++.+++|+|++|+||+++|++....|..                  +....+.    .
T Consensus       161 ~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~~~~------------------~~~~~~~----~  218 (258)
T PRK06949        161 PQIGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHHWET------------------EQGQKLV----S  218 (258)
T ss_pred             CCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhccCh------------------HHHHHHH----h
Confidence            88899999999999999999999999999999999999999986543321                  1111111    1


Q ss_pred             cCCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCc
Q 021960          257 LGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGV  296 (305)
Q Consensus       257 ~~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~  296 (305)
                       ..+.++...|+|+++.+.||+++.+++++|++|.+|||+
T Consensus       219 -~~~~~~~~~p~~~~~~~~~l~~~~~~~~~G~~i~~dgg~  257 (258)
T PRK06949        219 -MLPRKRVGKPEDLDGLLLLLAADESQFINGAIISADDGF  257 (258)
T ss_pred             -cCCCCCCcCHHHHHHHHHHHhChhhcCCCCcEEEeCCCC
Confidence             245678899999999999999999999999999999996

>PRK06483 dihydromonapterin reductase; Provisional

Probab=100.00  E-value=4.4e-38  Score=272.41  Aligned_cols=232  Identities=22%  Similarity=0.201  Sum_probs=192.7

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEE
Q 021960           31 GKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDIL  110 (305)
Q Consensus        31 ~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~l  110 (305)
                      +|++|||||++|||+++++.|+++|++|++++|+..........   ..+.++.+|++|.++++++++++.+.++++|++
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l   78 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQ---AGAQCIQADFSTNAGIMAFIDELKQHTDGLRAI   78 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHH---cCCEEEEcCCCCHHHHHHHHHHHHhhCCCccEE
Confidence            57999999999999999999999999999999876543221111   126789999999999999999999999999999


Q ss_pred             EEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC--CCEEEEecccccccCCCCCccchhhHHH
Q 021960          111 YNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRG--GGCIISTASVAGVMGGLGPHAYTASKHA  188 (305)
Q Consensus       111 i~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~~~iv~isS~~~~~~~~~~~~Y~~sKaa  188 (305)
                      |||||....    ....+.+.++|++.+++|+.+++.+++.+++.|.+.+  .++||++||..+..+.+++..|+++|++
T Consensus        79 v~~ag~~~~----~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~asKaa  154 (236)
T PRK06483         79 IHNASDWLA----EKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKGSDKHIAYAASKAA  154 (236)
T ss_pred             EECCccccC----CCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccCCCCCccHHHHHHH
Confidence            999997543    2345678899999999999999999999999998765  6899999999998888889999999999


Q ss_pred             HHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCCHH
Q 021960          189 IVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSK  268 (305)
Q Consensus       189 ~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (305)
                      +++|+++++.|+++ +|+||+|+||++.|+...        .             ++..+..   ..  ..+.++..+|+
T Consensus       155 l~~l~~~~a~e~~~-~irvn~v~Pg~~~~~~~~--------~-------------~~~~~~~---~~--~~~~~~~~~~~  207 (236)
T PRK06483        155 LDNMTLSFAAKLAP-EVKVNSIAPALILFNEGD--------D-------------AAYRQKA---LA--KSLLKIEPGEE  207 (236)
T ss_pred             HHHHHHHHHHHHCC-CcEEEEEccCceecCCCC--------C-------------HHHHHHH---hc--cCccccCCCHH
Confidence            99999999999987 599999999999765310        0             0111111   11  24567888999


Q ss_pred             HHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          269 DIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       269 dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      |+++.+.||++  +.++||++|.+|||.++
T Consensus       208 ~va~~~~~l~~--~~~~~G~~i~vdgg~~~  235 (236)
T PRK06483        208 EIIDLVDYLLT--SCYVTGRSLPVDGGRHL  235 (236)
T ss_pred             HHHHHHHHHhc--CCCcCCcEEEeCccccc
Confidence            99999999997  57999999999999764

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1.6e-40  Score=261.77  Aligned_cols=242  Identities=29%  Similarity=0.382  Sum_probs=211.5

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcC
Q 021960           26 HRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYG  105 (305)
Q Consensus        26 ~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g  105 (305)
                      ..++.|+.++|||+..|||+++++.|++.|+.|+.+.|+++.+..+.++.. ..+..+..|+++++.+.+.+-.+    +
T Consensus         2 ~t~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~p-~~I~Pi~~Dls~wea~~~~l~~v----~   76 (245)
T KOG1207|consen    2 KTSLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKETP-SLIIPIVGDLSAWEALFKLLVPV----F   76 (245)
T ss_pred             cccccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhCC-cceeeeEecccHHHHHHHhhccc----C
Confidence            457889999999999999999999999999999999999988777665543 34888999999988877766544    6


Q ss_pred             CccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC-CCCEEEEecccccccCCCCCccchh
Q 021960          106 RLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINR-GGGCIISTASVAGVMGGLGPHAYTA  184 (305)
Q Consensus       106 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~isS~~~~~~~~~~~~Y~~  184 (305)
                      ++|.+|||||..-.    .++.+++.+++++.|.+|+.++++..|...+.+..+ .+|.||++||.++..+..+...||+
T Consensus        77 pidgLVNNAgvA~~----~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~R~~~nHtvYca  152 (245)
T KOG1207|consen   77 PIDGLVNNAGVATN----HPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASIRPLDNHTVYCA  152 (245)
T ss_pred             chhhhhccchhhhc----chHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhcccccCCceEEee
Confidence            89999999998644    688899999999999999999999999987777655 4688999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCC
Q 021960          185 SKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT  264 (305)
Q Consensus       185 sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (305)
                      +|+|+++++|+||.|+++.+||||+|.|-.+.|.|.++.|......                 ..+-+     ..|.+++
T Consensus       153 tKaALDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~dnWSDP~K~-----------------k~mL~-----riPl~rF  210 (245)
T KOG1207|consen  153 TKAALDMLTKCLALELGPQKIRVNSVNPTVVMTDMGRDNWSDPDKK-----------------KKMLD-----RIPLKRF  210 (245)
T ss_pred             cHHHHHHHHHHHHHhhCcceeEeeccCCeEEEecccccccCCchhc-----------------cchhh-----hCchhhh
Confidence            9999999999999999999999999999999999999998762211                 11111     3678899


Q ss_pred             CCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          265 LRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       265 ~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      ..++|+..+++||+|+.+.+.||+++.++||++.
T Consensus       211 aEV~eVVnA~lfLLSd~ssmttGstlpveGGfs~  244 (245)
T KOG1207|consen  211 AEVDEVVNAVLFLLSDNSSMTTGSTLPVEGGFSN  244 (245)
T ss_pred             hHHHHHHhhheeeeecCcCcccCceeeecCCccC
Confidence            9999999999999999999999999999999974

>PRK06500 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.1e-38  Score=272.84  Aligned_cols=245  Identities=31%  Similarity=0.440  Sum_probs=203.8

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRL  107 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~i  107 (305)
                      ++++|+++||||+++||++++++|+++|++|++++|+........+.+ +.++.++.+|++|.+++..+++.+.+.++++
T Consensus         3 ~~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (249)
T PRK06500          3 RLQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAEL-GESALVIRADAGDVAAQKALAQALAEAFGRL   81 (249)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHh-CCceEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            467899999999999999999999999999999999865544443333 3468889999999999999999999999999


Q ss_pred             cEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhHH
Q 021960          108 DILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKH  187 (305)
Q Consensus       108 d~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKa  187 (305)
                      |+||||||....    .++.+.+.+++++.+++|+.+++.+++++.+.|.+  .+++|++||..+..+.+....|+++|+
T Consensus        82 d~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~~i~~~S~~~~~~~~~~~~Y~~sK~  155 (249)
T PRK06500         82 DAVFINAGVAKF----APLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLAN--PASIVLNGSINAHIGMPNSSVYAASKA  155 (249)
T ss_pred             CEEEECCCCCCC----CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc--CCEEEEEechHhccCCCCccHHHHHHH
Confidence            999999997543    45667899999999999999999999999998843  478999999999888889999999999


Q ss_pred             HHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCCH
Q 021960          188 AIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRS  267 (305)
Q Consensus       188 a~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (305)
                      ++++++++++.|+.++||++++|+||+++|++.......                . .....+...... ..+.+++.+|
T Consensus       156 a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~~~~~----------------~-~~~~~~~~~~~~-~~~~~~~~~~  217 (249)
T PRK06500        156 ALLSLAKTLSGELLPRGIRVNAVSPGPVQTPLYGKLGLP----------------E-ATLDAVAAQIQA-LVPLGRFGTP  217 (249)
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHHHHhhccC----------------c-cchHHHHHHHHh-cCCCCCCcCH
Confidence            999999999999999999999999999999985432110                0 001111111111 2356778899


Q ss_pred             HHHHHHHHHhccCCCCceeccEEEecCCcc
Q 021960          268 KDIAEAALYLASDESRYVSGHNLVVDGGVT  297 (305)
Q Consensus       268 ~dva~~v~~l~s~~~~~~tG~~i~idgG~~  297 (305)
                      +|+|+.+.||+++...+++|+.|.+|||.+
T Consensus       218 ~~va~~~~~l~~~~~~~~~g~~i~~~gg~~  247 (249)
T PRK06500        218 EEIAKAVLYLASDESAFIVGSEIIVDGGMS  247 (249)
T ss_pred             HHHHHHHHHHcCccccCccCCeEEECCCcc
Confidence            999999999999988999999999999964

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=100.00  E-value=6.4e-38  Score=272.86  Aligned_cols=242  Identities=24%  Similarity=0.353  Sum_probs=202.7

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cCcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhcC
Q 021960           29 LEGKVAIITGGARGIGEAAVRLFARHGAKVVIAD-VEDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRYG  105 (305)
Q Consensus        29 l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~-r~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g  105 (305)
                      |++|++|||||++|||++++++|+++|++|++.. ++........+.+  .+.++..+.+|++|.++++++++++.+.++
T Consensus         1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (246)
T PRK12938          1 MSQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVG   80 (246)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            4689999999999999999999999999988754 3333322222222  244678889999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhh
Q 021960          106 RLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTAS  185 (305)
Q Consensus       106 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  185 (305)
                      ++|+||||||....    .++.+.+.++|++.+++|+.+++.+++.+++.|.+++.++||++||..+..+.++...|+++
T Consensus        81 ~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~s  156 (246)
T PRK12938         81 EIDVLVNNAGITRD----VVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTA  156 (246)
T ss_pred             CCCEEEECCCCCCC----CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccCCCCCChhHHHH
Confidence            99999999997543    45677899999999999999999999999999988877899999999999888899999999


Q ss_pred             HHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCC
Q 021960          186 KHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL  265 (305)
Q Consensus       186 Kaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (305)
                      |++++.++++++.|+..+||++++|+||+++|++.....                   .+..+.+   ..  ..+.+++.
T Consensus       157 K~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~~~-------------------~~~~~~~---~~--~~~~~~~~  212 (246)
T PRK12938        157 KAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIR-------------------PDVLEKI---VA--TIPVRRLG  212 (246)
T ss_pred             HHHHHHHHHHHHHHhhhhCeEEEEEEecccCCchhhhcC-------------------hHHHHHH---Hh--cCCccCCc
Confidence            999999999999999999999999999999999854220                   1111111   11  24567788


Q ss_pred             CHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          266 RSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       266 ~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      +++|+++.++||+++...+++|+++.+|||+.+
T Consensus       213 ~~~~v~~~~~~l~~~~~~~~~g~~~~~~~g~~~  245 (246)
T PRK12938        213 SPDEIGSIVAWLASEESGFSTGADFSLNGGLHM  245 (246)
T ss_pred             CHHHHHHHHHHHcCcccCCccCcEEEECCcccC
Confidence            999999999999999889999999999999754

>PRK07576 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-37  Score=274.17  Aligned_cols=251  Identities=27%  Similarity=0.310  Sum_probs=206.1

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      +++++|++|||||++|||++++++|+++|++|++++|+........+.+  .+.++.++.+|++|.++++++++++.+.+
T Consensus         5 ~~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~   84 (264)
T PRK07576          5 FDFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEF   84 (264)
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            4678999999999999999999999999999999999865544333222  23457889999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchh
Q 021960          105 GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTA  184 (305)
Q Consensus       105 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~  184 (305)
                      +++|++|||||....    .++.+.+.+++++.+++|+.+++++++++++.|.++ +++||++||..+..+.+++..|++
T Consensus        85 ~~iD~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~-~g~iv~iss~~~~~~~~~~~~Y~a  159 (264)
T PRK07576         85 GPIDVLVSGAAGNFP----APAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRP-GASIIQISAPQAFVPMPMQAHVCA  159 (264)
T ss_pred             CCCCEEEECCCCCCC----CccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCEEEEECChhhccCCCCccHHHH
Confidence            999999999986532    456778899999999999999999999999988654 489999999999888889999999


Q ss_pred             hHHHHHHHHHHHHHHHCcCCcEEEEEeCCccc-cccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCC
Q 021960          185 SKHAIVGLTKNAACELGRYGIRVNCISPFGVA-TSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGT  263 (305)
Q Consensus       185 sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (305)
                      +|++++.|+++++.|+..+||+|++|+||+++ |+......                 +.+.....   +..  ..+.++
T Consensus       160 sK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~~~~~-----------------~~~~~~~~---~~~--~~~~~~  217 (264)
T PRK07576        160 AKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEGMARLA-----------------PSPELQAA---VAQ--SVPLKR  217 (264)
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEecccccCcHHHhhcc-----------------cCHHHHHH---HHh--cCCCCC
Confidence            99999999999999999999999999999997 55322111                 11111111   111  245677


Q ss_pred             CCCHHHHHHHHHHhccCCCCceeccEEEecCCccccccccc
Q 021960          264 TLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTSRNCVG  304 (305)
Q Consensus       264 ~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~~~~~~  304 (305)
                      ..+|+|+|+.++||+++...+++|+++.+|||+.....-+|
T Consensus       218 ~~~~~dva~~~~~l~~~~~~~~~G~~~~~~gg~~~~~~~~~  258 (264)
T PRK07576        218 NGTKQDIANAALFLASDMASYITGVVLPVDGGWSLGGASIA  258 (264)
T ss_pred             CCCHHHHHHHHHHHcChhhcCccCCEEEECCCcccCchHHH
Confidence            88999999999999999888999999999999875544333

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.7e-37  Score=270.71  Aligned_cols=244  Identities=28%  Similarity=0.394  Sum_probs=204.4

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHcCCeEEE-EecCcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhcC
Q 021960           29 LEGKVAIITGGARGIGEAAVRLFARHGAKVVI-ADVEDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRYG  105 (305)
Q Consensus        29 l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~-~~r~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g  105 (305)
                      |.++++|||||+||||++++++|+++|++|++ ..|+....+.+.+..  .+.++.++.+|++|++++.++++++.+.++
T Consensus         2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (250)
T PRK08063          2 FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFG   81 (250)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            56799999999999999999999999999876 466655444333322  245688899999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhh
Q 021960          106 RLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTAS  185 (305)
Q Consensus       106 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  185 (305)
                      ++|+||||||....    .++.+.+.+++++.+++|+.+++.+++++++.|.+++.++||++||..+..+.++...|+++
T Consensus        82 ~id~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~s  157 (250)
T PRK08063         82 RLDVFVNNAASGVL----RPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRYLENYTTVGVS  157 (250)
T ss_pred             CCCEEEECCCCCCC----CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCCccHHHHH
Confidence            99999999997543    56677889999999999999999999999999988888999999999888888889999999


Q ss_pred             HHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCC
Q 021960          186 KHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL  265 (305)
Q Consensus       186 Kaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (305)
                      |++++.|+++++.++.+.||++++|+||++.|++.......                 .+......    . ..+.++.+
T Consensus       158 K~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~~~-----------------~~~~~~~~----~-~~~~~~~~  215 (250)
T PRK08063        158 KAALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKHFPNR-----------------EELLEDAR----A-KTPAGRMV  215 (250)
T ss_pred             HHHHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhhccCc-----------------hHHHHHHh----c-CCCCCCCc
Confidence            99999999999999999999999999999999985331100                 01111111    1 13556788


Q ss_pred             CHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          266 RSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       266 ~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      +++|+|+.+++++++..++++|+++.+|||.++
T Consensus       216 ~~~dva~~~~~~~~~~~~~~~g~~~~~~gg~~~  248 (250)
T PRK08063        216 EPEDVANAVLFLCSPEADMIRGQTIIVDGGRSL  248 (250)
T ss_pred             CHHHHHHHHHHHcCchhcCccCCEEEECCCeee
Confidence            999999999999998888999999999999764

>PRK06057 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.2e-37  Score=271.20  Aligned_cols=244  Identities=34%  Similarity=0.570  Sum_probs=203.8

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRL  107 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~i  107 (305)
                      .+++|++|||||+||||++++++|+++|++|++++|+....+...+...   ..++.+|++|.++++++++++.+.++++
T Consensus         4 ~~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~---~~~~~~D~~~~~~~~~~~~~~~~~~~~i   80 (255)
T PRK06057          4 RLAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVG---GLFVPTDVTDEDAVNALFDTAAETYGSV   80 (255)
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC---CcEEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence            4789999999999999999999999999999999998665444433332   2578899999999999999999988999


Q ss_pred             cEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCC-CCccchhhH
Q 021960          108 DILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGL-GPHAYTASK  186 (305)
Q Consensus       108 d~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~-~~~~Y~~sK  186 (305)
                      |+||||||.....  ...+.+.+.+.+++.+++|+.+++++++.+++.|.+++.++||++||..+..+.+ +...|+++|
T Consensus        81 d~vi~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~~~~~~~Y~~sK  158 (255)
T PRK06057         81 DIAFNNAGISPPE--DDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGSATSQISYTASK  158 (255)
T ss_pred             CEEEECCCcCCCC--CCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCCCCCCcchHHHH
Confidence            9999999975431  1356677899999999999999999999999999887789999999988777653 678899999


Q ss_pred             HHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCC
Q 021960          187 HAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLR  266 (305)
Q Consensus       187 aa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (305)
                      ++++++++.++.++.++||+|++|+||+++|++....+..               ..+..    .....  ..+.+++.+
T Consensus       159 aal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~---------------~~~~~----~~~~~--~~~~~~~~~  217 (255)
T PRK06057        159 GGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQELFAK---------------DPERA----ARRLV--HVPMGRFAE  217 (255)
T ss_pred             HHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhhccC---------------CHHHH----HHHHh--cCCCCCCcC
Confidence            9999999999999998999999999999999986543221               00111    11111  235678899


Q ss_pred             HHHHHHHHHHhccCCCCceeccEEEecCCcc
Q 021960          267 SKDIAEAALYLASDESRYVSGHNLVVDGGVT  297 (305)
Q Consensus       267 ~~dva~~v~~l~s~~~~~~tG~~i~idgG~~  297 (305)
                      |+|+++.+.||+++...+++|+++.+|||..
T Consensus       218 ~~~~a~~~~~l~~~~~~~~~g~~~~~~~g~~  248 (255)
T PRK06057        218 PEEIAAAVAFLASDDASFITASTFLVDGGIS  248 (255)
T ss_pred             HHHHHHHHHHHhCccccCccCcEEEECCCee
Confidence            9999999999999999999999999999975

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.1e-37  Score=270.11  Aligned_cols=248  Identities=40%  Similarity=0.577  Sum_probs=210.2

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcC-CCCeEEEEecCCCHHHHHHHHHHHHHhcCC
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLA-PAPVTFVHCDVSLEEDIENLINSTVSRYGR  106 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~-~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~  106 (305)
                      ++.++++|||||+|+||++++++|+++|++|++++|+....+.....+. +.++.++.+|++|.++++++++++.+.+++
T Consensus         2 ~~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (251)
T PRK07231          2 RLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGS   81 (251)
T ss_pred             CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            4678999999999999999999999999999999998766554433332 345889999999999999999999888999


Q ss_pred             ccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhH
Q 021960          107 LDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASK  186 (305)
Q Consensus       107 id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  186 (305)
                      +|+||||+|.....   .++.+.+.+++++.+++|+.+++.+++.+.+.|.+++.++||++||..+..+.++...|+.+|
T Consensus        82 ~d~vi~~ag~~~~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sk  158 (251)
T PRK07231         82 VDILVNNAGTTHRN---GPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRPRPGLGWYNASK  158 (251)
T ss_pred             CCEEEECCCCCCCC---CChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCCCCCchHHHHHH
Confidence            99999999975432   456678899999999999999999999999999888889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCC
Q 021960          187 HAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLR  266 (305)
Q Consensus       187 aa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (305)
                      ++++.+++.++.+++++||++++++||+++|++........               ..+..+   .+..  ..+.+++.+
T Consensus       159 ~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~---------------~~~~~~---~~~~--~~~~~~~~~  218 (251)
T PRK07231        159 GAVITLTKALAAELGPDKIRVNAVAPVVVETGLLEAFMGEP---------------TPENRA---KFLA--TIPLGRLGT  218 (251)
T ss_pred             HHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhhhccc---------------ChHHHH---HHhc--CCCCCCCcC
Confidence            99999999999999988999999999999999865433210               001111   1112  245677889


Q ss_pred             HHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          267 SKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       267 ~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      ++|+|+.+++|+++...+++|+++.+|||...
T Consensus       219 ~~dva~~~~~l~~~~~~~~~g~~~~~~gg~~~  250 (251)
T PRK07231        219 PEDIANAALFLASDEASWITGVTLVVDGGRCV  250 (251)
T ss_pred             HHHHHHHHHHHhCccccCCCCCeEEECCCccC
Confidence            99999999999998888999999999999754

>PRK08278 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.9e-37  Score=274.49  Aligned_cols=235  Identities=27%  Similarity=0.294  Sum_probs=198.7

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchh-------hhHhhhc--CCCCeEEEEecCCCHHHHHHHHH
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLG-------SVLASTL--APAPVTFVHCDVSLEEDIENLIN   98 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~-------~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~   98 (305)
                      ++++|++|||||++|||+++++.|+++|++|++++|+....       ....+.+  .+.++.++.+|++|.+++.++++
T Consensus         3 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~   82 (273)
T PRK08278          3 SLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVA   82 (273)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHH
Confidence            46789999999999999999999999999999999875421       1111111  24568899999999999999999


Q ss_pred             HHHHhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCC--
Q 021960           99 STVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGG--  176 (305)
Q Consensus        99 ~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~--  176 (305)
                      ++.+.++++|+||||||....    .++.+.+.+++++.+++|+.+++++++.+.+.|.+++.++|+++||..+..+.  
T Consensus        83 ~~~~~~g~id~li~~ag~~~~----~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~  158 (273)
T PRK08278         83 KAVERFGGIDICVNNASAINL----TGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLDPKWF  158 (273)
T ss_pred             HHHHHhCCCCEEEECCCCcCC----CCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhcccccc
Confidence            999999999999999997543    45677899999999999999999999999999988878899999998887776  


Q ss_pred             CCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCC-ccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHh
Q 021960          177 LGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPF-GVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVS  255 (305)
Q Consensus       177 ~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG-~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (305)
                      +++..|++||+++++++++++.|+.++||+|++|+|| +++|++.......                             
T Consensus       159 ~~~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~~~~~~~~~-----------------------------  209 (273)
T PRK08278        159 APHTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATAAVRNLLGG-----------------------------  209 (273)
T ss_pred             CCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccHHHHhcccc-----------------------------
Confidence            7889999999999999999999999999999999999 6888864432111                             


Q ss_pred             hcCCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          256 GLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       256 ~~~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                        ..+.++..+|+++|+.+++++++..+++||+++ +|++...
T Consensus       210 --~~~~~~~~~p~~va~~~~~l~~~~~~~~~G~~~-~~~~~~~  249 (273)
T PRK08278        210 --DEAMRRSRTPEIMADAAYEILSRPAREFTGNFL-IDEEVLR  249 (273)
T ss_pred             --cccccccCCHHHHHHHHHHHhcCccccceeEEE-eccchhh
Confidence              122346779999999999999998889999988 6887643

>PRK08628 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-37  Score=272.58  Aligned_cols=250  Identities=27%  Similarity=0.345  Sum_probs=202.9

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc-CCCCeEEEEecCCCHHHHHHHHHHHHHhcC
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL-APAPVTFVHCDVSLEEDIENLINSTVSRYG  105 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~-~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g  105 (305)
                      .+|++|++|||||++|||++++++|+++|++|++++|+....+...+.. .+.++.++.+|++|.++++++++++.+.++
T Consensus         3 ~~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (258)
T PRK08628          3 LNLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFG   82 (258)
T ss_pred             CCcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcC
Confidence            4688999999999999999999999999999999998876542222211 245688999999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhh
Q 021960          106 RLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTAS  185 (305)
Q Consensus       106 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  185 (305)
                      ++|+||||||....    ..+.+.+ +++++.+++|+.+++.+.+.+++.+.+. .++|+++||..+..+.+++..|+++
T Consensus        83 ~id~vi~~ag~~~~----~~~~~~~-~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~iv~~ss~~~~~~~~~~~~Y~~s  156 (258)
T PRK08628         83 RIDGLVNNAGVNDG----VGLEAGR-EAFVASLERNLIHYYVMAHYCLPHLKAS-RGAIVNISSKTALTGQGGTSGYAAA  156 (258)
T ss_pred             CCCEEEECCcccCC----CcccCCH-HHHHHHHhhhhHHHHHHHHHHHHHhhcc-CcEEEEECCHHhccCCCCCchhHHH
Confidence            99999999997533    2333334 8999999999999999999999988654 4899999999999998899999999


Q ss_pred             HHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCC-CCC
Q 021960          186 KHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLK-GTT  264 (305)
Q Consensus       186 Kaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  264 (305)
                      |+++++++++++.|+.++||+|+.|+||.++|++....+...              +..+  +........  .+. .++
T Consensus       157 K~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~--------------~~~~--~~~~~~~~~--~~~~~~~  218 (258)
T PRK08628        157 KGAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYENWIATF--------------DDPE--AKLAAITAK--IPLGHRM  218 (258)
T ss_pred             HHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHHHhhhc--------------cCHH--HHHHHHHhc--CCccccC
Confidence            999999999999999999999999999999999854422110              0001  011111111  233 367


Q ss_pred             CCHHHHHHHHHHhccCCCCceeccEEEecCCccccc
Q 021960          265 LRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTSR  300 (305)
Q Consensus       265 ~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~~  300 (305)
                      .+|+|+|+.++|++++.+.+++|+.+.+|||++..+
T Consensus       219 ~~~~dva~~~~~l~~~~~~~~~g~~~~~~gg~~~~~  254 (258)
T PRK08628        219 TTAEEIADTAVFLLSERSSHTTGQWLFVDGGYVHLD  254 (258)
T ss_pred             CCHHHHHHHHHHHhChhhccccCceEEecCCccccc
Confidence            899999999999999998999999999999986644

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=8.8e-38  Score=268.45  Aligned_cols=196  Identities=30%  Similarity=0.492  Sum_probs=180.4

Q ss_pred             CCCCCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCC-CCeEEEEecCCCHHHHHHHHHHHH
Q 021960           23 PPSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAP-APVTFVHCDVSLEEDIENLINSTV  101 (305)
Q Consensus        23 ~~~~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~i~~~~~~~~  101 (305)
                      |....+.+|++||||||++|||+++|.+|+++|+++++.+.+.+...+..+...+ .+++.+.||++|.+++.+..++++
T Consensus        30 ~~~~k~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk  109 (300)
T KOG1201|consen   30 PKPLKSVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVK  109 (300)
T ss_pred             ccchhhccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHH
Confidence            3455688999999999999999999999999999999999988777666555532 379999999999999999999999


Q ss_pred             HhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCcc
Q 021960          102 SRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHA  181 (305)
Q Consensus       102 ~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~  181 (305)
                      ++.|.||+||||||....    .++.+.+.+.+++.+++|+.++++.+++++|.|.++..|+||.++|.+|..+.++...
T Consensus       110 ~e~G~V~ILVNNAGI~~~----~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~g~~gl~~  185 (300)
T KOG1201|consen  110 KEVGDVDILVNNAGIVTG----KKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLFGPAGLAD  185 (300)
T ss_pred             HhcCCceEEEeccccccC----CCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcccCCccchh
Confidence            999999999999999865    6788899999999999999999999999999999999999999999999999999999


Q ss_pred             chhhHHHHHHHHHHHHHHHC---cCCcEEEEEeCCccccccchh
Q 021960          182 YTASKHAIVGLTKNAACELG---RYGIRVNCISPFGVATSMLVN  222 (305)
Q Consensus       182 Y~~sKaa~~~~~~~la~e~~---~~~i~v~~v~PG~v~T~~~~~  222 (305)
                      ||+||+|+.+|.++|..|+.   .+||+...|+|++++|.|+..
T Consensus       186 YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tgmf~~  229 (300)
T KOG1201|consen  186 YCASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFINTGMFDG  229 (300)
T ss_pred             hhhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeeccccccCC
Confidence            99999999999999999985   567999999999999999765

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.8e-37  Score=268.19  Aligned_cols=233  Identities=31%  Similarity=0.442  Sum_probs=194.3

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRL  107 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~i  107 (305)
                      ++++|+++||||++|||+++++.|+++|++|++++|+....       ...++.++.+|+++.      ++++.+.++++
T Consensus         2 ~l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~-------~~~~~~~~~~D~~~~------~~~~~~~~~~i   68 (235)
T PRK06550          2 EFMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD-------LSGNFHFLQLDLSDD------LEPLFDWVPSV   68 (235)
T ss_pred             CCCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc-------cCCcEEEEECChHHH------HHHHHHhhCCC
Confidence            46789999999999999999999999999999998875321       123578899999886      44455566889


Q ss_pred             cEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhHH
Q 021960          108 DILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKH  187 (305)
Q Consensus       108 d~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKa  187 (305)
                      |+||||||.....   .++.+.+.+++++.+++|+.+++++++.+++.+.+++.++||++||..+..+.++...|+++|+
T Consensus        69 d~lv~~ag~~~~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~  145 (235)
T PRK06550         69 DILCNTAGILDDY---KPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAGGGGAAYTASKH  145 (235)
T ss_pred             CEEEECCCCCCCC---CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCCcccHHHHH
Confidence            9999999975322   4566788999999999999999999999999998888899999999999999889999999999


Q ss_pred             HHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCCH
Q 021960          188 AIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRS  267 (305)
Q Consensus       188 a~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (305)
                      +++.++++++.|+.++||++++|+||+++|++....++.                 +...+.+   ..  ..+.+++.+|
T Consensus       146 a~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~~~~~-----------------~~~~~~~---~~--~~~~~~~~~~  203 (235)
T PRK06550        146 ALAGFTKQLALDYAKDGIQVFGIAPGAVKTPMTAADFEP-----------------GGLADWV---AR--ETPIKRWAEP  203 (235)
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEeeCCccCcccccccCc-----------------hHHHHHH---hc--cCCcCCCCCH
Confidence            999999999999999999999999999999974322111                 1111111   11  2467888999


Q ss_pred             HHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          268 KDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       268 ~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      +|+|+.++||+++...+++|+++.+|||+.+
T Consensus       204 ~~~a~~~~~l~s~~~~~~~g~~~~~~gg~~~  234 (235)
T PRK06550        204 EEVAELTLFLASGKADYMQGTIVPIDGGWTL  234 (235)
T ss_pred             HHHHHHHHHHcChhhccCCCcEEEECCceec
Confidence            9999999999999889999999999999753

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.8e-37  Score=271.92  Aligned_cols=240  Identities=25%  Similarity=0.329  Sum_probs=201.2

Q ss_pred             CCCCCEEEEecCCC--chHHHHHHHHHHcCCeEEEEecCc-----------chhhhHhhhc--CCCCeEEEEecCCCHHH
Q 021960           28 RLEGKVAIITGGAR--GIGEAAVRLFARHGAKVVIADVED-----------TLGSVLASTL--APAPVTFVHCDVSLEED   92 (305)
Q Consensus        28 ~l~~k~vlVtGas~--giG~~ia~~l~~~g~~vv~~~r~~-----------~~~~~~~~~~--~~~~v~~~~~D~~d~~~   92 (305)
                      .+++|++|||||++  |||.+++++|+++|++|++++|+.           .....+....  .+.++.++.+|++|.++
T Consensus         2 ~l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   81 (256)
T PRK12748          2 PLMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYA   81 (256)
T ss_pred             CCCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHH
Confidence            46789999999994  999999999999999999998871           1111121111  23468999999999999


Q ss_pred             HHHHHHHHHHhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEeccccc
Q 021960           93 IENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAG  172 (305)
Q Consensus        93 i~~~~~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~  172 (305)
                      ++.+++++.+.++++|+||||||....    .++.+.+.+++++.+++|+.+++++.+++.+.|.++..++||++||..+
T Consensus        82 ~~~~~~~~~~~~g~id~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~  157 (256)
T PRK12748         82 PNRVFYAVSERLGDPSILINNAAYSTH----TRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQS  157 (256)
T ss_pred             HHHHHHHHHHhCCCCCEEEECCCcCCC----CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccc
Confidence            999999999999999999999997543    5677789999999999999999999999999987777789999999999


Q ss_pred             ccCCCCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHH
Q 021960          173 VMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEE  252 (305)
Q Consensus       173 ~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (305)
                      ..+.++...|+++|+++++++++++.|+..+||+|++|+||+++|++..+.                      ..+... 
T Consensus       158 ~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~~~----------------------~~~~~~-  214 (256)
T PRK12748        158 LGPMPDELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWITEE----------------------LKHHLV-  214 (256)
T ss_pred             cCCCCCchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCChh----------------------HHHhhh-
Confidence            888888999999999999999999999999999999999999999863211                      000110 


Q ss_pred             HHhhcCCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          253 FVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       253 ~~~~~~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                        .  ..+.+++.+|+|+|+.+.||+++....++|+++.+|||+.+
T Consensus       215 --~--~~~~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~d~g~~~  256 (256)
T PRK12748        215 --P--KFPQGRVGEPVDAARLIAFLVSEEAKWITGQVIHSEGGFSR  256 (256)
T ss_pred             --c--cCCCCCCcCHHHHHHHHHHHhCcccccccCCEEEecCCccC
Confidence              0  13446778999999999999999988999999999999753

>PRK12939 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.1e-37  Score=268.09  Aligned_cols=245  Identities=34%  Similarity=0.458  Sum_probs=208.5

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      ..+++|++|||||+|+||+++++.|+++|++|++++|++...+...+.+  .+.++.++.+|++|.++++++++++.+.+
T Consensus         3 ~~~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   82 (250)
T PRK12939          3 SNLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAAL   82 (250)
T ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            4577899999999999999999999999999999988866554443332  23468899999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchh
Q 021960          105 GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTA  184 (305)
Q Consensus       105 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~  184 (305)
                      +++|+||||+|....    ..+.+.+.+.+++.++.|+.+++++++.+.+.|.+++.+++|++||..+..+.+....|++
T Consensus        83 ~~id~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~  158 (250)
T PRK12939         83 GGLDGLVNNAGITNS----KSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGAPKLGAYVA  158 (250)
T ss_pred             CCCCEEEECCCCCCC----CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccCCCCcchHHH
Confidence            999999999997644    4566788999999999999999999999999998877899999999999988888899999


Q ss_pred             hHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCC
Q 021960          185 SKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT  264 (305)
Q Consensus       185 sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (305)
                      +|++++.+++.++.++..++|+++.|+||+++|++......                  ......+.   .  ..+.+++
T Consensus       159 sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~------------------~~~~~~~~---~--~~~~~~~  215 (250)
T PRK12939        159 SKGAVIGMTRSLARELGGRGITVNAIAPGLTATEATAYVPA------------------DERHAYYL---K--GRALERL  215 (250)
T ss_pred             HHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccccCC------------------hHHHHHHH---h--cCCCCCC
Confidence            99999999999999999899999999999999998543211                  01111111   1  2456778


Q ss_pred             CCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          265 LRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       265 ~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      .+++|+++.+++++++..++++|++|.+|||+..
T Consensus       216 ~~~~dva~~~~~l~~~~~~~~~G~~i~~~gg~~~  249 (250)
T PRK12939        216 QVPDDVAGAVLFLLSDAARFVTGQLLPVNGGFVM  249 (250)
T ss_pred             CCHHHHHHHHHHHhCccccCccCcEEEECCCccc
Confidence            9999999999999998888999999999999753

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.9e-37  Score=278.76  Aligned_cols=241  Identities=33%  Similarity=0.491  Sum_probs=198.7

Q ss_pred             CCCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcc-hhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHH
Q 021960           25 SHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDT-LGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTV  101 (305)
Q Consensus        25 ~~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~-~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~  101 (305)
                      +..++++|++|||||++|||+++|+.|+++|++|++.++... ..+...+.+  .+.++.++.+|++|.++++++++++.
T Consensus         6 ~~~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~   85 (306)
T PRK07792          6 NTTDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAV   85 (306)
T ss_pred             CCcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHH
Confidence            446789999999999999999999999999999999887532 222222222  24568899999999999999999998


Q ss_pred             HhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC-------CCCEEEEeccccccc
Q 021960          102 SRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINR-------GGGCIISTASVAGVM  174 (305)
Q Consensus       102 ~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-------~~~~iv~isS~~~~~  174 (305)
                      + +|++|+||||||....    ..+.+.+.++|++.+++|+.+++++++.+.++|.++       ..|+||++||.++..
T Consensus        86 ~-~g~iD~li~nAG~~~~----~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~  160 (306)
T PRK07792         86 G-LGGLDIVVNNAGITRD----RMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLV  160 (306)
T ss_pred             H-hCCCCEEEECCCCCCC----CCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCccccc
Confidence            8 8999999999998644    456778999999999999999999999999988643       137999999999998


Q ss_pred             CCCCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHH
Q 021960          175 GGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFV  254 (305)
Q Consensus       175 ~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (305)
                      +.++...|+++|++++.|++.++.|+.++||+||+|+||. .|+|....+...              +  +.   ..   
T Consensus       161 ~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg~-~t~~~~~~~~~~--------------~--~~---~~---  217 (306)
T PRK07792        161 GPVGQANYGAAKAGITALTLSAARALGRYGVRANAICPRA-RTAMTADVFGDA--------------P--DV---EA---  217 (306)
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCCC-CCchhhhhcccc--------------c--hh---hh---
Confidence            8889999999999999999999999999999999999994 888754322110              0  00   00   


Q ss_pred             hhcCCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          255 SGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       255 ~~~~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                           .....++|+++++.+.||+++.++++||+++.+|||...
T Consensus       218 -----~~~~~~~pe~va~~v~~L~s~~~~~~tG~~~~v~gg~~~  256 (306)
T PRK07792        218 -----GGIDPLSPEHVVPLVQFLASPAAAEVNGQVFIVYGPMVT  256 (306)
T ss_pred             -----hccCCCCHHHHHHHHHHHcCccccCCCCCEEEEcCCeEE
Confidence                 011234899999999999999988999999999999754

>TIGR02415 23BDH acetoin reductases

Probab=100.00  E-value=4.4e-37  Score=268.76  Aligned_cols=249  Identities=35%  Similarity=0.520  Sum_probs=206.6

Q ss_pred             CEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 021960           32 KVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRYGRLDI  109 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~  109 (305)
                      |+++||||+|+||++++++|+++|++|++++|+....+.....+  .+.++.++.+|++|.++++++++++.+.++++|+
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~   80 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDV   80 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            68999999999999999999999999999998865554443332  2456889999999999999999999999999999


Q ss_pred             EEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-CCEEEEecccccccCCCCCccchhhHHH
Q 021960          110 LYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRG-GGCIISTASVAGVMGGLGPHAYTASKHA  188 (305)
Q Consensus       110 li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sKaa  188 (305)
                      ||||||....    .++.+.+.+++++.+++|+.+++++++.+++.|.+++ .++||++||..+..+.+....|+.+|++
T Consensus        81 vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  156 (254)
T TIGR02415        81 MVNNAGVAPI----TPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGNPILSAYSSTKFA  156 (254)
T ss_pred             EEECCCcCCC----CCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCCCCCcchHHHHHH
Confidence            9999997643    5677889999999999999999999999999998765 4799999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCCHH
Q 021960          189 IVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSK  268 (305)
Q Consensus       189 ~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (305)
                      +++|++.++.|+.+.||+|++|+||+++|++.........        .....+.......+   ..  ..+.+++.+|+
T Consensus       157 ~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~--------~~~~~~~~~~~~~~---~~--~~~~~~~~~~~  223 (254)
T TIGR02415       157 VRGLTQTAAQELAPKGITVNAYCPGIVKTPMWEEIDEETS--------EIAGKPIGEGFEEF---SS--EIALGRPSEPE  223 (254)
T ss_pred             HHHHHHHHHHHhcccCeEEEEEecCcccChhhhhhhhhhh--------hcccCchHHHHHHH---Hh--hCCCCCCCCHH
Confidence            9999999999999999999999999999998543321100        00111111111121   11  25677899999


Q ss_pred             HHHHHHHHhccCCCCceeccEEEecCCcc
Q 021960          269 DIAEAALYLASDESRYVSGHNLVVDGGVT  297 (305)
Q Consensus       269 dva~~v~~l~s~~~~~~tG~~i~idgG~~  297 (305)
                      |+++.+.||+++...+++|+++.+|||+.
T Consensus       224 ~~a~~~~~l~~~~~~~~~g~~~~~d~g~~  252 (254)
T TIGR02415       224 DVAGLVSFLASEDSDYITGQSILVDGGMV  252 (254)
T ss_pred             HHHHHHHhhcccccCCccCcEEEecCCcc
Confidence            99999999999999999999999999965

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK05872 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.7e-37  Score=276.52  Aligned_cols=238  Identities=26%  Similarity=0.356  Sum_probs=202.1

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcC-CCCeEEEEecCCCHHHHHHHHHHHHHhcC
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLA-PAPVTFVHCDVSLEEDIENLINSTVSRYG  105 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~-~~~v~~~~~D~~d~~~i~~~~~~~~~~~g  105 (305)
                      .++++|++|||||++|||+++++.|+++|++|++++|+....+.+.+.+. +.++..+.+|++|.++++++++++.+.++
T Consensus         5 ~~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   84 (296)
T PRK05872          5 TSLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFG   84 (296)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            46789999999999999999999999999999999998776665555443 34567778999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhh
Q 021960          106 RLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTAS  185 (305)
Q Consensus       106 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  185 (305)
                      ++|+||||||....    .++.+.+.++|++.+++|+.+++++++.+++.|.++ .|+||++||..+..+.++...|+++
T Consensus        85 ~id~vI~nAG~~~~----~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~as  159 (296)
T PRK05872         85 GIDVVVANAGIASG----GSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIER-RGYVLQVSSLAAFAAAPGMAAYCAS  159 (296)
T ss_pred             CCCEEEECCCcCCC----cCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCEEEEEeCHhhcCCCCCchHHHHH
Confidence            99999999998643    567788999999999999999999999999998764 5899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCC
Q 021960          186 KHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL  265 (305)
Q Consensus       186 Kaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (305)
                      |+++++|+++++.|+..+||+|++|+||+++|+|.......                 ..   ....+......+.++..
T Consensus       160 Kaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~~-----------------~~---~~~~~~~~~~~p~~~~~  219 (296)
T PRK05872        160 KAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDADAD-----------------LP---AFRELRARLPWPLRRTT  219 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhhcccc-----------------ch---hHHHHHhhCCCcccCCC
Confidence            99999999999999999999999999999999986542111                 01   11112222234667889


Q ss_pred             CHHHHHHHHHHhccCCCCceeccE
Q 021960          266 RSKDIAEAALYLASDESRYVSGHN  289 (305)
Q Consensus       266 ~~~dva~~v~~l~s~~~~~~tG~~  289 (305)
                      +++|+++.+.+++++...+++|..
T Consensus       220 ~~~~va~~i~~~~~~~~~~i~~~~  243 (296)
T PRK05872        220 SVEKCAAAFVDGIERRARRVYAPR  243 (296)
T ss_pred             CHHHHHHHHHHHHhcCCCEEEchH
Confidence            999999999999999888888763

>PRK12742 oxidoreductase; Provisional

Probab=100.00  E-value=6e-37  Score=265.20  Aligned_cols=232  Identities=31%  Similarity=0.420  Sum_probs=189.3

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecC-cchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCC
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVE-DTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGR  106 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~-~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~  106 (305)
                      .+++|++|||||+||||+++++.|+++|++|+++.++ ....+.+....   .+.++.+|++|.+++.+++++    +++
T Consensus         3 ~~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~---~~~~~~~D~~~~~~~~~~~~~----~~~   75 (237)
T PRK12742          3 AFTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQET---GATAVQTDSADRDAVIDVVRK----SGA   75 (237)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHh---CCeEEecCCCCHHHHHHHHHH----hCC
Confidence            4679999999999999999999999999999887653 33333332222   256788999999888877653    578


Q ss_pred             ccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccc-cCCCCCccchhh
Q 021960          107 LDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGV-MGGLGPHAYTAS  185 (305)
Q Consensus       107 id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~-~~~~~~~~Y~~s  185 (305)
                      +|++|||||....    ....+.+.++|++.+++|+.+++.+++.+++.|.  ..++||++||..+. .+.++...|+++
T Consensus        76 id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~g~iv~isS~~~~~~~~~~~~~Y~~s  149 (237)
T PRK12742         76 LDILVVNAGIAVF----GDALELDADDIDRLFKINIHAPYHASVEAARQMP--EGGRIIIIGSVNGDRMPVAGMAAYAAS  149 (237)
T ss_pred             CcEEEECCCCCCC----CCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHh--cCCeEEEEeccccccCCCCCCcchHHh
Confidence            9999999997543    4456778999999999999999999999999884  35799999998874 577889999999


Q ss_pred             HHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCC
Q 021960          186 KHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL  265 (305)
Q Consensus       186 Kaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (305)
                      |++++.++++++.+++++||+|++|+||+++|++....                 .+   ..+...    . ..+.+++.
T Consensus       150 Kaa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~~-----------------~~---~~~~~~----~-~~~~~~~~  204 (237)
T PRK12742        150 KSALQGMARGLARDFGPRGITINVVQPGPIDTDANPAN-----------------GP---MKDMMH----S-FMAIKRHG  204 (237)
T ss_pred             HHHHHHHHHHHHHHHhhhCeEEEEEecCcccCCccccc-----------------cH---HHHHHH----h-cCCCCCCC
Confidence            99999999999999999999999999999999984211                 00   001111    1 24567889


Q ss_pred             CHHHHHHHHHHhccCCCCceeccEEEecCCcc
Q 021960          266 RSKDIAEAALYLASDESRYVSGHNLVVDGGVT  297 (305)
Q Consensus       266 ~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~  297 (305)
                      +|+|+++.+.||+++.++++||++|.+|||++
T Consensus       205 ~p~~~a~~~~~l~s~~~~~~~G~~~~~dgg~~  236 (237)
T PRK12742        205 RPEEVAGMVAWLAGPEASFVTGAMHTIDGAFG  236 (237)
T ss_pred             CHHHHHHHHHHHcCcccCcccCCEEEeCCCcC
Confidence            99999999999999999999999999999975

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=100.00  E-value=7.5e-37  Score=266.54  Aligned_cols=247  Identities=29%  Similarity=0.451  Sum_probs=208.4

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhcCC
Q 021960           29 LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRYGR  106 (305)
Q Consensus        29 l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~  106 (305)
                      |++|++|||||+|+||+++++.|+++|++|++++|+......+....  .+.++.++.+|++|.++++++++.+.+.+++
T Consensus         1 ~~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~   80 (250)
T TIGR03206         1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGP   80 (250)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            46899999999999999999999999999999998876554443322  2356889999999999999999999999999


Q ss_pred             ccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhH
Q 021960          107 LDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASK  186 (305)
Q Consensus       107 id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  186 (305)
                      +|++|||+|....    .++.+.+.+++++.+++|+.+++++++.+.+.|.+.+.++||++||..+..+.++...|+.+|
T Consensus        81 ~d~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~~~~~~Y~~sK  156 (250)
T TIGR03206        81 VDVLVNNAGWDKF----GPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGSSGEAVYAACK  156 (250)
T ss_pred             CCEEEECCCCCCC----CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCCCCCchHHHHH
Confidence            9999999997533    456677889999999999999999999999999887788999999999999889999999999


Q ss_pred             HHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCC
Q 021960          187 HAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLR  266 (305)
Q Consensus       187 aa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (305)
                      ++++.++++++.++.+.+++++.++||.++|++.........             ..++.   ...+..  ..+.+++.+
T Consensus       157 ~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~-------------~~~~~---~~~~~~--~~~~~~~~~  218 (250)
T TIGR03206       157 GGLVAFSKTMAREHARHGITVNVVCPGPTDTALLDDICGGAE-------------NPEKL---REAFTR--AIPLGRLGQ  218 (250)
T ss_pred             HHHHHHHHHHHHHHhHhCcEEEEEecCcccchhHHhhhhccC-------------ChHHH---HHHHHh--cCCccCCcC
Confidence            999999999999998889999999999999998655432110             00111   111222  246678889


Q ss_pred             HHHHHHHHHHhccCCCCceeccEEEecCCcc
Q 021960          267 SKDIAEAALYLASDESRYVSGHNLVVDGGVT  297 (305)
Q Consensus       267 ~~dva~~v~~l~s~~~~~~tG~~i~idgG~~  297 (305)
                      ++|+|+.+.+|+++...+++|+++.+|||.+
T Consensus       219 ~~dva~~~~~l~~~~~~~~~g~~~~~~~g~~  249 (250)
T TIGR03206       219 PDDLPGAILFFSSDDASFITGQVLSVSGGLT  249 (250)
T ss_pred             HHHHHHHHHHHcCcccCCCcCcEEEeCCCcc
Confidence            9999999999999999999999999999975

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=100.00  E-value=5.4e-37  Score=265.92  Aligned_cols=234  Identities=27%  Similarity=0.427  Sum_probs=196.3

Q ss_pred             EEEecCCCchHHHHHHHHHHcCCeEEEEecCc-chhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEE
Q 021960           34 AIITGGARGIGEAAVRLFARHGAKVVIADVED-TLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRYGRLDIL  110 (305)
Q Consensus        34 vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~-~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~l  110 (305)
                      +|||||++|||+++++.|+++|++|++++|+. ...+...+.+  .+.++.++.+|++|.++++++++++.+.++++|++
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~l   80 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYGV   80 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            58999999999999999999999999887653 3333333222  24568999999999999999999999999999999


Q ss_pred             EEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHH-HHHHcCCCCEEEEecccccccCCCCCccchhhHHHH
Q 021960          111 YNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAA-RVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAI  189 (305)
Q Consensus       111 i~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKaa~  189 (305)
                      |||+|....    .++.+.+.++|++.+++|+.+++++++.++ +.+.+++.++||++||.++..+.+++..|+++|+++
T Consensus        81 i~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~  156 (239)
T TIGR01831        81 VLNAGITRD----AAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMGNRGQVNYSAAKAGL  156 (239)
T ss_pred             EECCCCCCC----CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccCCCCCcchHHHHHHH
Confidence            999997643    456677899999999999999999999875 555556678999999999999999999999999999


Q ss_pred             HHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCCHHH
Q 021960          190 VGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSKD  269 (305)
Q Consensus       190 ~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  269 (305)
                      ++++++++.|+.++||++++|+||+++|++..+.-                    +..   .....  ..+.++..+|+|
T Consensus       157 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~--------------------~~~---~~~~~--~~~~~~~~~~~~  211 (239)
T TIGR01831       157 IGATKALAVELAKRKITVNCIAPGLIDTEMLAEVE--------------------HDL---DEALK--TVPMNRMGQPAE  211 (239)
T ss_pred             HHHHHHHHHHHhHhCeEEEEEEEccCccccchhhh--------------------HHH---HHHHh--cCCCCCCCCHHH
Confidence            99999999999999999999999999999854310                    001   11111  256788899999


Q ss_pred             HHHHHHHhccCCCCceeccEEEecCCc
Q 021960          270 IAEAALYLASDESRYVSGHNLVVDGGV  296 (305)
Q Consensus       270 va~~v~~l~s~~~~~~tG~~i~idgG~  296 (305)
                      +++.+.||+++.+.+++|+++.+|||+
T Consensus       212 va~~~~~l~~~~~~~~~g~~~~~~gg~  238 (239)
T TIGR01831       212 VASLAGFLMSDGASYVTRQVISVNGGM  238 (239)
T ss_pred             HHHHHHHHcCchhcCccCCEEEecCCc
Confidence            999999999999999999999999995

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=8.2e-37  Score=268.08  Aligned_cols=244  Identities=37%  Similarity=0.504  Sum_probs=203.6

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      .++++|++|||||+|+||.++++.|+++|++|++++|+....+...+.+  .+.++.++.+|++|.++++++++++.+.+
T Consensus         8 ~~~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~   87 (259)
T PRK08213          8 FDLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERF   87 (259)
T ss_pred             hCcCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            3567999999999999999999999999999999999866544443332  23467889999999999999999999998


Q ss_pred             CCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHH-HHcCCCCEEEEecccccccCCCC----C
Q 021960          105 GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARV-MINRGGGCIISTASVAGVMGGLG----P  179 (305)
Q Consensus       105 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~~iv~isS~~~~~~~~~----~  179 (305)
                      +++|+||||||....    .+..+.+.+.|++.+++|+.+++++++.+.+. |.+++.++||++||..+..+.+.    .
T Consensus        88 ~~id~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~~~~~~  163 (259)
T PRK08213         88 GHVDILVNNAGATWG----APAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPEVMDT  163 (259)
T ss_pred             CCCCEEEECCCCCCC----CChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCccccCc
Confidence            999999999997533    45566788999999999999999999999998 76666789999999887766543    4


Q ss_pred             ccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCC
Q 021960          180 HAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGN  259 (305)
Q Consensus       180 ~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (305)
                      ..|+++|++++.+++++++++.++||++++|+||+++|++....++.                   ..+.   ...  ..
T Consensus       164 ~~Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~~~~~~-------------------~~~~---~~~--~~  219 (259)
T PRK08213        164 IAYNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTRGTLER-------------------LGED---LLA--HT  219 (259)
T ss_pred             chHHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchhhhhHH-------------------HHHH---HHh--cC
Confidence            89999999999999999999999999999999999999875432211                   1111   111  24


Q ss_pred             CCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          260 LKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       260 ~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      +..++.+++|+++.+.||+++.+++++|+++.+|||.++
T Consensus       220 ~~~~~~~~~~va~~~~~l~~~~~~~~~G~~~~~~~~~~~  258 (259)
T PRK08213        220 PLGRLGDDEDLKGAALLLASDASKHITGQILAVDGGVSA  258 (259)
T ss_pred             CCCCCcCHHHHHHHHHHHhCccccCccCCEEEECCCeec
Confidence            567788999999999999999999999999999999753

>PRK07814 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-36  Score=267.35  Aligned_cols=244  Identities=33%  Similarity=0.456  Sum_probs=205.7

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhcC
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRYG  105 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g  105 (305)
                      .+++|++|||||+||||+++++.|+++|++|++++|+....+.+.+.+  .+.++.++.+|++|.++++++++++.+.++
T Consensus         7 ~~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   86 (263)
T PRK07814          7 RLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFG   86 (263)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            478999999999999999999999999999999999866554443333  234688899999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHc-CCCCEEEEecccccccCCCCCccchh
Q 021960          106 RLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMIN-RGGGCIISTASVAGVMGGLGPHAYTA  184 (305)
Q Consensus       106 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~~iv~isS~~~~~~~~~~~~Y~~  184 (305)
                      ++|+||||||....    ..+.+.+.+++++.+++|+.+++.+++.+.+.|.+ ++.++||++||..+..+.++...|++
T Consensus        87 ~id~vi~~Ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~  162 (263)
T PRK07814         87 RLDIVVNNVGGTMP----NPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRLAGRGFAAYGT  162 (263)
T ss_pred             CCCEEEECCCCCCC----CChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccCCCCCCchhHH
Confidence            99999999997533    45677899999999999999999999999999977 46789999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCC
Q 021960          185 SKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT  264 (305)
Q Consensus       185 sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (305)
                      +|++++.++++++.|+.+ +|++++|+||+++|++.... ..                ..+....+.   .  ..+..+.
T Consensus       163 sK~a~~~~~~~~~~e~~~-~i~v~~i~Pg~v~t~~~~~~-~~----------------~~~~~~~~~---~--~~~~~~~  219 (263)
T PRK07814        163 AKAALAHYTRLAALDLCP-RIRVNAIAPGSILTSALEVV-AA----------------NDELRAPME---K--ATPLRRL  219 (263)
T ss_pred             HHHHHHHHHHHHHHHHCC-CceEEEEEeCCCcCchhhhc-cC----------------CHHHHHHHH---h--cCCCCCC
Confidence            999999999999999986 69999999999999875321 00                011111111   1  1355677


Q ss_pred             CCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          265 LRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       265 ~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      .+++|+|+.++|++++..++++|+++.+|||...
T Consensus       220 ~~~~~va~~~~~l~~~~~~~~~g~~~~~~~~~~~  253 (263)
T PRK07814        220 GDPEDIAAAAVYLASPAGSYLTGKTLEVDGGLTF  253 (263)
T ss_pred             cCHHHHHHHHHHHcCccccCcCCCEEEECCCccC
Confidence            8999999999999999889999999999999765

>PRK09186 flagellin modification protein A; Provisional

Probab=100.00  E-value=3.4e-37  Score=269.77  Aligned_cols=240  Identities=28%  Similarity=0.445  Sum_probs=197.3

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc----CCCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           29 LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL----APAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        29 l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~----~~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      +++|++|||||++|||+++|+.|+++|++|++++|+....+.....+    ....+.++.+|++|.++++++++++.+.+
T Consensus         2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~   81 (256)
T PRK09186          2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKY   81 (256)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence            56899999999999999999999999999999998876554443332    23346778999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCC-------
Q 021960          105 GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGL-------  177 (305)
Q Consensus       105 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~-------  177 (305)
                      +++|+||||||..... ....+.+.+.+.+++.+++|+.+++.+++.+++.|.+++.++||++||..+..+..       
T Consensus        82 ~~id~vi~~A~~~~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~  160 (256)
T PRK09186         82 GKIDGAVNCAYPRNKD-YGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKFEIYEGT  160 (256)
T ss_pred             CCccEEEECCcccccc-ccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhccccchhcccc
Confidence            9999999999864321 12456788999999999999999999999999999888888999999987764321       


Q ss_pred             ---CCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHH
Q 021960          178 ---GPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFV  254 (305)
Q Consensus       178 ---~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (305)
                         ....|+++|+++++++++++.|+.++||+|+.|+||.+.++....                       ..+.+.   
T Consensus       161 ~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~~~-----------------------~~~~~~---  214 (256)
T PRK09186        161 SMTSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQPEA-----------------------FLNAYK---  214 (256)
T ss_pred             ccCCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCCHH-----------------------HHHHHH---
Confidence               224699999999999999999999999999999999987754111                       001111   


Q ss_pred             hhcCCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCcc
Q 021960          255 SGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT  297 (305)
Q Consensus       255 ~~~~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~  297 (305)
                      .  ..+.+++++|+|+|+.++|++++..++++|++|.+|||++
T Consensus       215 ~--~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g~~  255 (256)
T PRK09186        215 K--CCNGKGMLDPDDICGTLVFLLSDQSKYITGQNIIVDDGFS  255 (256)
T ss_pred             h--cCCccCCCCHHHhhhhHhheeccccccccCceEEecCCcc
Confidence            1  1244678899999999999999999999999999999975

>PRK12937 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-36  Score=264.60  Aligned_cols=240  Identities=32%  Similarity=0.472  Sum_probs=201.0

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcch-hhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTL-GSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~-~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      ++++|++|||||++|||+++++.|+++|++|+++.++... .....+.+  .+.++.++.+|++|.++++++++++.+.+
T Consensus         2 ~~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   81 (245)
T PRK12937          2 TLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAF   81 (245)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            5678999999999999999999999999999887765432 22222222  24568899999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchh
Q 021960          105 GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTA  184 (305)
Q Consensus       105 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~  184 (305)
                      +++|+||||||....    .++.+.+.+++++.+++|+.+++.+++.+++.|.+  .++||++||..+..+.+++..|++
T Consensus        82 ~~id~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~iv~~ss~~~~~~~~~~~~Y~~  155 (245)
T PRK12937         82 GRIDVLVNNAGVMPL----GTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQ--GGRIINLSTSVIALPLPGYGPYAA  155 (245)
T ss_pred             CCCCEEEECCCCCCC----CChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhcc--CcEEEEEeeccccCCCCCCchhHH
Confidence            999999999997543    45667889999999999999999999999998843  579999999999889899999999


Q ss_pred             hHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCC
Q 021960          185 SKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT  264 (305)
Q Consensus       185 sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (305)
                      +|++++.++++++.|+...|++++.|+||+++|+|.....                 . .+..+.+   ..  ..+.++.
T Consensus       156 sK~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~-----------------~-~~~~~~~---~~--~~~~~~~  212 (245)
T PRK12937        156 SKAAVEGLVHVLANELRGRGITVNAVAPGPVATELFFNGK-----------------S-AEQIDQL---AG--LAPLERL  212 (245)
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhcccC-----------------C-HHHHHHH---Hh--cCCCCCC
Confidence            9999999999999999999999999999999999853210                 0 1111111   11  2466788


Q ss_pred             CCHHHHHHHHHHhccCCCCceeccEEEecCCc
Q 021960          265 LRSKDIAEAALYLASDESRYVSGHNLVVDGGV  296 (305)
Q Consensus       265 ~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~  296 (305)
                      .+++|+++.+.||+++...+++|+++.+|||.
T Consensus       213 ~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~g~  244 (245)
T PRK12937        213 GTPEEIAAAVAFLAGPDGAWVNGQVLRVNGGF  244 (245)
T ss_pred             CCHHHHHHHHHHHcCccccCccccEEEeCCCC
Confidence            89999999999999998899999999999986

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=100.00  E-value=1.2e-36  Score=264.39  Aligned_cols=242  Identities=29%  Similarity=0.446  Sum_probs=205.1

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRL  107 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~i  107 (305)
                      +++++++|||||+|+||+++++.|+++|+.|++.+|+....+...... +.++.++.+|++|.++++++++++.+.++++
T Consensus         3 ~~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (245)
T PRK12936          3 DLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAEL-GERVKIFPANLSDRDEVKALGQKAEADLEGV   81 (245)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-CCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            568899999999999999999999999999988888765555443333 3458889999999999999999999999999


Q ss_pred             cEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhHH
Q 021960          108 DILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKH  187 (305)
Q Consensus       108 d~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKa  187 (305)
                      |+||||||....    .++.+.+.+++++.+++|+.+++++++.+.+.+.+++.++||++||..+..+.++...|+.+|+
T Consensus        82 d~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sk~  157 (245)
T PRK12936         82 DILVNNAGITKD----GLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGNPGQANYCASKA  157 (245)
T ss_pred             CEEEECCCCCCC----CccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCCCCCcchHHHHH
Confidence            999999997643    4566778899999999999999999999999887777889999999999999899999999999


Q ss_pred             HHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCCH
Q 021960          188 AIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRS  267 (305)
Q Consensus       188 a~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (305)
                      +++++++.++.++...|+++++|+||+++|++.... ..                  ...+..   ..  ..+.+++.++
T Consensus       158 a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~-~~------------------~~~~~~---~~--~~~~~~~~~~  213 (245)
T PRK12936        158 GMIGFSKSLAQEIATRNVTVNCVAPGFIESAMTGKL-ND------------------KQKEAI---MG--AIPMKRMGTG  213 (245)
T ss_pred             HHHHHHHHHHHHhhHhCeEEEEEEECcCcCchhccc-Ch------------------HHHHHH---hc--CCCCCCCcCH
Confidence            999999999999998999999999999999874321 00                  000011   11  2456778899


Q ss_pred             HHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          268 KDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       268 ~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      +|+++.+.||+++...+++|+++.+|||+..
T Consensus       214 ~~ia~~~~~l~~~~~~~~~G~~~~~~~g~~~  244 (245)
T PRK12936        214 AEVASAVAYLASSEAAYVTGQTIHVNGGMAM  244 (245)
T ss_pred             HHHHHHHHHHcCccccCcCCCEEEECCCccc
Confidence            9999999999998888999999999999764

>PRK07069 short chain dehydrogenase; Validated

Probab=100.00  E-value=1.1e-36  Score=265.77  Aligned_cols=242  Identities=35%  Similarity=0.490  Sum_probs=200.9

Q ss_pred             EEEecCCCchHHHHHHHHHHcCCeEEEEecC-cchhhhHhhhcC----CCCeEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 021960           34 AIITGGARGIGEAAVRLFARHGAKVVIADVE-DTLGSVLASTLA----PAPVTFVHCDVSLEEDIENLINSTVSRYGRLD  108 (305)
Q Consensus        34 vlVtGas~giG~~ia~~l~~~g~~vv~~~r~-~~~~~~~~~~~~----~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id  108 (305)
                      ++||||++|||+++++.|+++|++|++++|+ ....+...+.+.    ...+..+.+|++|.++++++++++.+.++++|
T Consensus         2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   81 (251)
T PRK07069          2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGLS   81 (251)
T ss_pred             EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCcc
Confidence            7999999999999999999999999999987 444333333221    22356688999999999999999999999999


Q ss_pred             EEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhHHH
Q 021960          109 ILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHA  188 (305)
Q Consensus       109 ~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKaa  188 (305)
                      +||||||....    ..+.+.+.+++++.+++|+.+++.+++.+++.|.+++.++||++||..+..+.+++..|+++|++
T Consensus        82 ~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~~~Y~~sK~a  157 (251)
T PRK07069         82 VLVNNAGVGSF----GAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKAEPDYTAYNASKAA  157 (251)
T ss_pred             EEEECCCcCCC----CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccCCCCCchhHHHHHH
Confidence            99999997643    45677889999999999999999999999999988778999999999999998999999999999


Q ss_pred             HHHHHHHHHHHHCcCC--cEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCC
Q 021960          189 IVGLTKNAACELGRYG--IRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLR  266 (305)
Q Consensus       189 ~~~~~~~la~e~~~~~--i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (305)
                      +++++++++.|+.+++  |+|++|+||+++|++.......              .+.++....+   .+  ..+.+++.+
T Consensus       158 ~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~--------------~~~~~~~~~~---~~--~~~~~~~~~  218 (251)
T PRK07069        158 VASLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQR--------------LGEEEATRKL---AR--GVPLGRLGE  218 (251)
T ss_pred             HHHHHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhhh--------------ccchhHHHHH---hc--cCCCCCCcC
Confidence            9999999999997665  9999999999999986543211              0111111111   11  245577889


Q ss_pred             HHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          267 SKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       267 ~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      |+|+++.++||+++...+++|+.+.+|||.+.
T Consensus       219 ~~~va~~~~~l~~~~~~~~~g~~i~~~~g~~~  250 (251)
T PRK07069        219 PDDVAHAVLYLASDESRFVTGAELVIDGGICA  250 (251)
T ss_pred             HHHHHHHHHHHcCccccCccCCEEEECCCeec
Confidence            99999999999999999999999999999764

>PRK06138 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.9e-37  Score=266.10  Aligned_cols=249  Identities=39%  Similarity=0.583  Sum_probs=209.0

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc-CCCCeEEEEecCCCHHHHHHHHHHHHHhcCC
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL-APAPVTFVHCDVSLEEDIENLINSTVSRYGR  106 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~-~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~  106 (305)
                      ++++|++|||||+|+||++++++|+++|++|++++|+........+.. .+.++.++.+|++|.++++++++++.+.+++
T Consensus         2 ~~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   81 (252)
T PRK06138          2 RLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGR   81 (252)
T ss_pred             CCCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            467999999999999999999999999999999999866544433322 2456889999999999999999999999999


Q ss_pred             ccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhH
Q 021960          107 LDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASK  186 (305)
Q Consensus       107 id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  186 (305)
                      +|+||||+|....    ..+.+.+.+++++.+++|+.+++.+.+.+++.|.+++.++|+++||..+..+.++...|+.+|
T Consensus        82 id~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sK  157 (252)
T PRK06138         82 LDVLVNNAGFGCG----GTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAGGRGRAAYVASK  157 (252)
T ss_pred             CCEEEECCCCCCC----CCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCCccHHHHHH
Confidence            9999999997643    456677899999999999999999999999999888889999999999998888899999999


Q ss_pred             HHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCC
Q 021960          187 HAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLR  266 (305)
Q Consensus       187 aa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (305)
                      ++++.++++++.|+..+|+++++++||++.|++....+....             . .+....   .... ..+.+++.+
T Consensus       158 ~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~-------------~-~~~~~~---~~~~-~~~~~~~~~  219 (252)
T PRK06138        158 GAIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRRIFARHA-------------D-PEALRE---ALRA-RHPMNRFGT  219 (252)
T ss_pred             HHHHHHHHHHHHHHHhcCeEEEEEEECCccCcchhhhhcccc-------------C-hHHHHH---HHHh-cCCCCCCcC
Confidence            999999999999999889999999999999998654432210             0 111111   1111 234556789


Q ss_pred             HHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          267 SKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       267 ~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      ++|+++.+++++++..++++|+.+.+|||++.
T Consensus       220 ~~d~a~~~~~l~~~~~~~~~g~~~~~~~g~~~  251 (252)
T PRK06138        220 AEEVAQAALFLASDESSFATGTTLVVDGGWLA  251 (252)
T ss_pred             HHHHHHHHHHHcCchhcCccCCEEEECCCeec
Confidence            99999999999999889999999999999764

>PRK06484 short chain dehydrogenase; Validated

Probab=100.00  E-value=7.4e-37  Score=293.93  Aligned_cols=246  Identities=37%  Similarity=0.522  Sum_probs=208.4

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 021960           29 LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLD  108 (305)
Q Consensus        29 l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id  108 (305)
                      ..+|++|||||++|||+++++.|+++|++|++++|+....+...+.+ +.++.++.+|++|.++++++++++.+.++++|
T Consensus         3 ~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD   81 (520)
T PRK06484          3 AQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSL-GPDHHALAMDVSDEAQIREGFEQLHREFGRID   81 (520)
T ss_pred             CCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-CCceeEEEeccCCHHHHHHHHHHHHHHhCCCC
Confidence            46899999999999999999999999999999999877665554444 34578899999999999999999999999999


Q ss_pred             EEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCC-EEEEecccccccCCCCCccchhhHH
Q 021960          109 ILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGG-CIISTASVAGVMGGLGPHAYTASKH  187 (305)
Q Consensus       109 ~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~-~iv~isS~~~~~~~~~~~~Y~~sKa  187 (305)
                      +||||||.....  ..++.+.+.++|++.+++|+.+++.+++.+++.|.+++.+ +||++||..+..+.++...|+++|+
T Consensus        82 ~li~nag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~~~~~~Y~asKa  159 (520)
T PRK06484         82 VLVNNAGVTDPT--MTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVALPKRTAYSASKA  159 (520)
T ss_pred             EEEECCCcCCCC--CcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCCCCCchHHHHHH
Confidence            999999974321  1456778999999999999999999999999999876655 9999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCCH
Q 021960          188 AIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRS  267 (305)
Q Consensus       188 a~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (305)
                      ++++|+++++.|+.+++|+|++|+||+++|++..+.....                ........   .  ..+.+++.+|
T Consensus       160 al~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~----------------~~~~~~~~---~--~~~~~~~~~~  218 (520)
T PRK06484        160 AVISLTRSLACEWAAKGIRVNAVLPGYVRTQMVAELERAG----------------KLDPSAVR---S--RIPLGRLGRP  218 (520)
T ss_pred             HHHHHHHHHHHHhhhhCeEEEEEccCCcCchhhhhhcccc----------------hhhhHHHH---h--cCCCCCCcCH
Confidence            9999999999999999999999999999999865432110                00001111   1  1355678899


Q ss_pred             HHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          268 KDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       268 ~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      +|+++.++||+++..++++|+++.+|||+..
T Consensus       219 ~~va~~v~~l~~~~~~~~~G~~~~~~gg~~~  249 (520)
T PRK06484        219 EEIAEAVFFLASDQASYITGSTLVVDGGWTV  249 (520)
T ss_pred             HHHHHHHHHHhCccccCccCceEEecCCeec
Confidence            9999999999999999999999999999754

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=100.00  E-value=3.1e-36  Score=264.44  Aligned_cols=254  Identities=28%  Similarity=0.421  Sum_probs=208.7

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhcC
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRYG  105 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g  105 (305)
                      .+++|++|||||+|+||+++++.|+++|++|++++|++...+...+.+  .+.++.++.+|++|.++++++++++.+.++
T Consensus         4 ~~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   83 (262)
T PRK13394          4 NLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFG   83 (262)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            567899999999999999999999999999999999876554444333  234588899999999999999999998999


Q ss_pred             CccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHH-HcCCCCEEEEecccccccCCCCCccchh
Q 021960          106 RLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVM-INRGGGCIISTASVAGVMGGLGPHAYTA  184 (305)
Q Consensus       106 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~~~iv~isS~~~~~~~~~~~~Y~~  184 (305)
                      ++|+||||||....    ..+.+.+.+.+++.+++|+.+++.+++.+++.| .+.+.++||++||..+..+.+....|++
T Consensus        84 ~~d~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~~~~~~~~y~~  159 (262)
T PRK13394         84 SVDILVSNAGIQIV----NPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVT  159 (262)
T ss_pred             CCCEEEECCccCCC----CchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcCCCCCCcccHH
Confidence            99999999997643    455667889999999999999999999999999 6667789999999999888888899999


Q ss_pred             hHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCC
Q 021960          185 SKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT  264 (305)
Q Consensus       185 sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (305)
                      +|++++++++.++.++.+.+|++++|+||+++|++..+.++..        ....+.+.++...   .++.. ..+.+++
T Consensus       160 sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~--------~~~~~~~~~~~~~---~~~~~-~~~~~~~  227 (262)
T PRK13394        160 AKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQ--------AKELGISEEEVVK---KVMLG-KTVDGVF  227 (262)
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhhhHhh--------hhccCCChHHHHH---HHHhc-CCCCCCC
Confidence            9999999999999999888999999999999999855433220        0011111122111   11211 2456788


Q ss_pred             CCHHHHHHHHHHhccCCCCceeccEEEecCCcc
Q 021960          265 LRSKDIAEAALYLASDESRYVSGHNLVVDGGVT  297 (305)
Q Consensus       265 ~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~  297 (305)
                      ++++|+++.++++++....+++|+.|.+|||+.
T Consensus       228 ~~~~dva~a~~~l~~~~~~~~~g~~~~~~~g~~  260 (262)
T PRK13394        228 TTVEDVAQTVLFLSSFPSAALTGQSFVVSHGWF  260 (262)
T ss_pred             CCHHHHHHHHHHHcCccccCCcCCEEeeCCcee
Confidence            999999999999999887889999999999974

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=100.00  E-value=3e-36  Score=263.87  Aligned_cols=254  Identities=37%  Similarity=0.503  Sum_probs=211.6

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhcCC
Q 021960           29 LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRYGR  106 (305)
Q Consensus        29 l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~  106 (305)
                      +++|++|||||+|+||++++++|+++|++|++++|+....+.....+  .+.++.++.+|++|.++++++++++.+.++.
T Consensus         2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   81 (258)
T PRK12429          2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGG   81 (258)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            56899999999999999999999999999999999876655444333  2456889999999999999999999999999


Q ss_pred             ccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhH
Q 021960          107 LDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASK  186 (305)
Q Consensus       107 id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  186 (305)
                      +|+||||||....    ..+.+.+.++++..+++|+.+++++++.+++.|.+++.++||++||..+..+.++...|+++|
T Consensus        82 ~d~vi~~a~~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~~k  157 (258)
T PRK12429         82 VDILVNNAGIQHV----APIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLVGSAGKAAYVSAK  157 (258)
T ss_pred             CCEEEECCCCCCC----CChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCCcchhHHHH
Confidence            9999999997643    456678889999999999999999999999999988889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCC
Q 021960          187 HAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLR  266 (305)
Q Consensus       187 aa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (305)
                      ++++++++.++.|+.+.+|++++++||+++|++........        ....+.+......   ..... ..+.+++.+
T Consensus       158 ~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~~~~~~--------~~~~~~~~~~~~~---~~~~~-~~~~~~~~~  225 (258)
T PRK12429        158 HGLIGLTKVVALEGATHGVTVNAICPGYVDTPLVRKQIPDL--------AKERGISEEEVLE---DVLLP-LVPQKRFTT  225 (258)
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEecCCCcchhhhhhhhhh--------ccccCCChHHHHH---HHHhc-cCCccccCC
Confidence            99999999999999989999999999999999865432221        0111222222211   11111 234567899


Q ss_pred             HHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          267 SKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       267 ~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      ++|+|+.+++|+++....++|+++.+|||++.
T Consensus       226 ~~d~a~~~~~l~~~~~~~~~g~~~~~~~g~~~  257 (258)
T PRK12429        226 VEEIADYALFLASFAAKGVTGQAWVVDGGWTA  257 (258)
T ss_pred             HHHHHHHHHHHcCccccCccCCeEEeCCCEec
Confidence            99999999999998878899999999999864

>PRK12744 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-36  Score=266.10  Aligned_cols=245  Identities=27%  Similarity=0.377  Sum_probs=188.8

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcc----hhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHH
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDT----LGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTV  101 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~----~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~  101 (305)
                      .+++|++|||||++|||+++|+.|+++|++|+++.++..    ..+...+.+  .+.++.++.+|++|.++++++++++.
T Consensus         5 ~l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~   84 (257)
T PRK12744          5 SLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAK   84 (257)
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHH
Confidence            567899999999999999999999999999766654321    122222222  23468899999999999999999999


Q ss_pred             HhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEe-cccccccCCCCCc
Q 021960          102 SRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIIST-ASVAGVMGGLGPH  180 (305)
Q Consensus       102 ~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~i-sS~~~~~~~~~~~  180 (305)
                      +.++++|+||||||....    .++.+.+.+++++.+++|+.+++++++.+.+.|.+  .++++++ ||..+ .+.+++.
T Consensus        85 ~~~~~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~--~~~iv~~~ss~~~-~~~~~~~  157 (257)
T PRK12744         85 AAFGRPDIAINTVGKVLK----KPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLND--NGKIVTLVTSLLG-AFTPFYS  157 (257)
T ss_pred             HhhCCCCEEEECCcccCC----CCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhcc--CCCEEEEecchhc-ccCCCcc
Confidence            999999999999997543    46677899999999999999999999999998853  3667766 44433 3457788


Q ss_pred             cchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCC
Q 021960          181 AYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNL  260 (305)
Q Consensus       181 ~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (305)
                      .|+++|++++.|+++++.|+.++||+|++|+||+++|++.......     +.             ..............
T Consensus       158 ~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~-----~~-------------~~~~~~~~~~~~~~  219 (257)
T PRK12744        158 AYAGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEGA-----EA-------------VAYHKTAAALSPFS  219 (257)
T ss_pred             cchhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccchhcccccc-----ch-------------hhcccccccccccc
Confidence            9999999999999999999999999999999999999974321000     00             00000000000011


Q ss_pred             CCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          261 KGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       261 ~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      ..++.+++|+++.+.||+++ .++++|+++.+|||+..
T Consensus       220 ~~~~~~~~dva~~~~~l~~~-~~~~~g~~~~~~gg~~~  256 (257)
T PRK12744        220 KTGLTDIEDIVPFIRFLVTD-GWWITGQTILINGGYTT  256 (257)
T ss_pred             cCCCCCHHHHHHHHHHhhcc-cceeecceEeecCCccC
Confidence            23678999999999999996 67999999999999753

>PRK05884 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-36  Score=261.67  Aligned_cols=217  Identities=23%  Similarity=0.280  Sum_probs=178.0

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEEEE
Q 021960           33 VAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILYN  112 (305)
Q Consensus        33 ~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~li~  112 (305)
                      +++||||++|||+++++.|+++|++|++++|+....+...+..   .+.++.+|++|.++++++++++.+   ++|++||
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~D~~~~~~v~~~~~~~~~---~id~lv~   75 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKEL---DVDAIVCDNTDPASLEEARGLFPH---HLDTIVN   75 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc---cCcEEecCCCCHHHHHHHHHHHhh---cCcEEEE
Confidence            5899999999999999999999999999999866554443332   356789999999999999887642   6999999


Q ss_pred             cCCCCCCCC--CCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhHHHHH
Q 021960          113 NAGVLGNQR--KHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIV  190 (305)
Q Consensus       113 nag~~~~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKaa~~  190 (305)
                      |||......  ....+.+ +.++|++.+++|+.+++++++.++|.|.+  .|+||++||.+    .+....|+++|+|++
T Consensus        76 ~ag~~~~~~~~~~~~~~~-~~~~~~~~~~~N~~~~~~~~~~~~~~~~~--~g~Iv~isS~~----~~~~~~Y~asKaal~  148 (223)
T PRK05884         76 VPAPSWDAGDPRTYSLAD-TANAWRNALDATVLSAVLTVQSVGDHLRS--GGSIISVVPEN----PPAGSAEAAIKAALS  148 (223)
T ss_pred             CCCccccCCCCcccchhc-CHHHHHHHHHHHHHHHHHHHHHHHHHhhc--CCeEEEEecCC----CCCccccHHHHHHHH
Confidence            998532110  0112333 57899999999999999999999999954  58999999976    346689999999999


Q ss_pred             HHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCCHHHH
Q 021960          191 GLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSKDI  270 (305)
Q Consensus       191 ~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv  270 (305)
                      +|+++++.|++++||+||+|+||+++|++....                           .      ..|.   .+|+|+
T Consensus       149 ~~~~~la~e~~~~gI~v~~v~PG~v~t~~~~~~---------------------------~------~~p~---~~~~~i  192 (223)
T PRK05884        149 NWTAGQAAVFGTRGITINAVACGRSVQPGYDGL---------------------------S------RTPP---PVAAEI  192 (223)
T ss_pred             HHHHHHHHHhhhcCeEEEEEecCccCchhhhhc---------------------------c------CCCC---CCHHHH
Confidence            999999999999999999999999999863210                           0      0121   279999


Q ss_pred             HHHHHHhccCCCCceeccEEEecCCccc
Q 021960          271 AEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       271 a~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      ++.+.||+++.+.+++|+++.+|||...
T Consensus       193 a~~~~~l~s~~~~~v~G~~i~vdgg~~~  220 (223)
T PRK05884        193 ARLALFLTTPAARHITGQTLHVSHGALA  220 (223)
T ss_pred             HHHHHHHcCchhhccCCcEEEeCCCeec
Confidence            9999999999999999999999999754

>PRK05875 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.6e-36  Score=265.71  Aligned_cols=246  Identities=26%  Similarity=0.371  Sum_probs=206.8

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcC----CCCeEEEEecCCCHHHHHHHHHHHHHh
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLA----PAPVTFVHCDVSLEEDIENLINSTVSR  103 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~----~~~v~~~~~D~~d~~~i~~~~~~~~~~  103 (305)
                      .|++|++|||||+|+||+++++.|+++|++|++++|+....+...+.+.    ..++.++.+|++|.++++++++++.+.
T Consensus         4 ~~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   83 (276)
T PRK05875          4 SFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAW   83 (276)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            4678999999999999999999999999999999988655443333221    246888999999999999999999999


Q ss_pred             cCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccch
Q 021960          104 YGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYT  183 (305)
Q Consensus       104 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~  183 (305)
                      ++++|++|||||.....   .++.+.+.+++.+.+++|+.+++.+++.+++.|.+++.++|+++||..+..+.++...|+
T Consensus        84 ~~~~d~li~~ag~~~~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~  160 (276)
T PRK05875         84 HGRLHGVVHCAGGSETI---GPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNTHRWFGAYG  160 (276)
T ss_pred             cCCCCEEEECCCcccCC---CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCCCCCCcchH
Confidence            99999999999975332   456677889999999999999999999999999877788999999999988888889999


Q ss_pred             hhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCC
Q 021960          184 ASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGT  263 (305)
Q Consensus       184 ~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (305)
                      ++|++++.+++.++.++...+|++++|+||+++|++.......                 .....   .+..  ..+.++
T Consensus       161 ~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~-----------------~~~~~---~~~~--~~~~~~  218 (276)
T PRK05875        161 VTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPITES-----------------PELSA---DYRA--CTPLPR  218 (276)
T ss_pred             HHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCccccccccC-----------------HHHHH---HHHc--CCCCCC
Confidence            9999999999999999999999999999999999985432111                 11111   1111  245677


Q ss_pred             CCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          264 TLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       264 ~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      +.+++|+++.+.||+++...+++|+++++|||...
T Consensus       219 ~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g~~~  253 (276)
T PRK05875        219 VGEVEDVANLAMFLLSDAASWITGQVINVDGGHML  253 (276)
T ss_pred             CcCHHHHHHHHHHHcCchhcCcCCCEEEECCCeec
Confidence            88999999999999999888999999999999765

>PRK08703 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3e-36  Score=261.37  Aligned_cols=230  Identities=20%  Similarity=0.229  Sum_probs=195.6

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc---CCCCeEEEEecCCC--HHHHHHHHHHHHH
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL---APAPVTFVHCDVSL--EEDIENLINSTVS  102 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~---~~~~v~~~~~D~~d--~~~i~~~~~~~~~  102 (305)
                      .|++|+++||||+||||+++++.|+++|++|++++|+....+...+.+   .+.++.++.+|++|  .+++.++++++.+
T Consensus         3 ~l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~   82 (239)
T PRK08703          3 TLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAE   82 (239)
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHH
Confidence            467899999999999999999999999999999999876655443332   23357788999976  5789999999988


Q ss_pred             hc-CCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCcc
Q 021960          103 RY-GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHA  181 (305)
Q Consensus       103 ~~-g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~  181 (305)
                      .+ +++|+||||||.....   .++.+.+.+++++.+++|+.+++++++.+++.|.+.+.++++++||..+..+.+++..
T Consensus        83 ~~~~~id~vi~~ag~~~~~---~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~  159 (239)
T PRK08703         83 ATQGKLDGIVHCAGYFYAL---SPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGETPKAYWGG  159 (239)
T ss_pred             HhCCCCCEEEEeccccccC---CCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEeccccccCCCCccc
Confidence            87 7899999999975432   4567789999999999999999999999999998877899999999999999888999


Q ss_pred             chhhHHHHHHHHHHHHHHHCcC-CcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCC
Q 021960          182 YTASKHAIVGLTKNAACELGRY-GIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNL  260 (305)
Q Consensus       182 Y~~sKaa~~~~~~~la~e~~~~-~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (305)
                      |+++|++++.++++++.|+.++ +|+|+.|+||+++|++.....+.                                ..
T Consensus       160 Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~~~~~~--------------------------------~~  207 (239)
T PRK08703        160 FGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIKSHPG--------------------------------EA  207 (239)
T ss_pred             hHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCccccccCCC--------------------------------CC
Confidence            9999999999999999999876 69999999999999985433221                                00


Q ss_pred             CCCCCCHHHHHHHHHHhccCCCCceeccEEEe
Q 021960          261 KGTTLRSKDIAEAALYLASDESRYVSGHNLVV  292 (305)
Q Consensus       261 ~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~i  292 (305)
                      ..+..+++|+++.++|+++++++++||++|.+
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  239 (239)
T PRK08703        208 KSERKSYGDVLPAFVWWASAESKGRSGEIVYL  239 (239)
T ss_pred             ccccCCHHHHHHHHHHHhCccccCcCCeEeeC
Confidence            12335899999999999999999999999864

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=4.7e-36  Score=261.43  Aligned_cols=240  Identities=33%  Similarity=0.459  Sum_probs=195.1

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cCcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 021960           31 GKVAIITGGARGIGEAAVRLFARHGAKVVIAD-VEDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRYGRL  107 (305)
Q Consensus        31 ~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~-r~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~i  107 (305)
                      .|++|||||++|||.++++.|+++|++|+++. |+....+.....+  .+.++.++.||++|.++++++++++.+.++++
T Consensus         2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (248)
T PRK06947          2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRL   81 (248)
T ss_pred             CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCC
Confidence            37899999999999999999999999998764 4433333322222  23468899999999999999999999889999


Q ss_pred             cEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC---CCEEEEecccccccCCCC-Cccch
Q 021960          108 DILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRG---GGCIISTASVAGVMGGLG-PHAYT  183 (305)
Q Consensus       108 d~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~---~~~iv~isS~~~~~~~~~-~~~Y~  183 (305)
                      |+||||||.....   .++.+.+.+++++.+++|+.+++++++.+++.+..++   .++||++||.++..+.+. +..|+
T Consensus        82 d~li~~ag~~~~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~~Y~  158 (248)
T PRK06947         82 DALVNNAGIVAPS---MPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSPNEYVDYA  158 (248)
T ss_pred             CEEEECCccCCCC---CChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCCCCCcccH
Confidence            9999999976432   3566788999999999999999999999999886553   578999999988877664 56899


Q ss_pred             hhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCC
Q 021960          184 ASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGT  263 (305)
Q Consensus       184 ~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (305)
                      ++|+++++++++++.++.++||+|+.|+||+++|++....  .              .+  +..+..    .. ..+.++
T Consensus       159 ~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~--~--------------~~--~~~~~~----~~-~~~~~~  215 (248)
T PRK06947        159 GSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHASG--G--------------QP--GRAARL----GA-QTPLGR  215 (248)
T ss_pred             hhHHHHHHHHHHHHHHhhhhCcEEEEEeccCccccccccc--C--------------CH--HHHHHH----hh-cCCCCC
Confidence            9999999999999999999999999999999999984321  0              00  000111    11 245677


Q ss_pred             CCCHHHHHHHHHHhccCCCCceeccEEEecCCc
Q 021960          264 TLRSKDIAEAALYLASDESRYVSGHNLVVDGGV  296 (305)
Q Consensus       264 ~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~  296 (305)
                      ..++||+++.++|+++++.++++|++|.+|||.
T Consensus       216 ~~~~e~va~~~~~l~~~~~~~~~G~~~~~~gg~  248 (248)
T PRK06947        216 AGEADEVAETIVWLLSDAASYVTGALLDVGGGR  248 (248)
T ss_pred             CcCHHHHHHHHHHHcCccccCcCCceEeeCCCC
Confidence            889999999999999999999999999999984

>PRK06139 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.3e-36  Score=272.78  Aligned_cols=224  Identities=26%  Similarity=0.336  Sum_probs=190.6

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      ..+.+|++||||||+|||+++++.|+++|++|++++|++...+...+.+  .+.++.++.+|++|.++++++++++.+.+
T Consensus         3 ~~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~   82 (330)
T PRK06139          3 GPLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFG   82 (330)
T ss_pred             cCCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhc
Confidence            4578999999999999999999999999999999999877765554433  24568889999999999999999999988


Q ss_pred             CCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchh
Q 021960          105 GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTA  184 (305)
Q Consensus       105 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~  184 (305)
                      +++|++|||||....    .++.+.+.+++++.+++|+.+++++++.++|.|.+++.|+||++||..+..+.++...|++
T Consensus        83 g~iD~lVnnAG~~~~----~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~~p~~~~Y~a  158 (330)
T PRK06139         83 GRIDVWVNNVGVGAV----GRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAAQPYAAAYSA  158 (330)
T ss_pred             CCCCEEEECCCcCCC----CCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCCCCCchhHHH
Confidence            999999999997643    5678889999999999999999999999999999888899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCcC-CcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCC
Q 021960          185 SKHAIVGLTKNAACELGRY-GIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGT  263 (305)
Q Consensus       185 sKaa~~~~~~~la~e~~~~-~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (305)
                      +|+++.+|+++|+.|+.+. ||+|++|+||+++|++.........                           ....+...
T Consensus       159 sKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~~~~~~---------------------------~~~~~~~~  211 (330)
T PRK06139        159 SKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHGANYTG---------------------------RRLTPPPP  211 (330)
T ss_pred             HHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCccccccccccc---------------------------ccccCCCC
Confidence            9999999999999999874 8999999999999998542110000                           00012234


Q ss_pred             CCCHHHHHHHHHHhccCC
Q 021960          264 TLRSKDIAEAALYLASDE  281 (305)
Q Consensus       264 ~~~~~dva~~v~~l~s~~  281 (305)
                      ..+||++|+.+++++.+.
T Consensus       212 ~~~pe~vA~~il~~~~~~  229 (330)
T PRK06139        212 VYDPRRVAKAVVRLADRP  229 (330)
T ss_pred             CCCHHHHHHHHHHHHhCC
Confidence            678999999999988654

>PRK08862 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.5e-36  Score=260.07  Aligned_cols=220  Identities=18%  Similarity=0.202  Sum_probs=184.4

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhcC
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRYG  105 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g  105 (305)
                      ++.+|+++||||++|||+++++.|+++|++|++++|+....+.+.+.+  .+.++..+.+|++|.++++++++++.+.++
T Consensus         2 ~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   81 (227)
T PRK08862          2 DIKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFN   81 (227)
T ss_pred             CCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            568999999999999999999999999999999999877665544332  234578889999999999999999999998


Q ss_pred             -CccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-CCEEEEecccccccCCCCCccch
Q 021960          106 -RLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRG-GGCIISTASVAGVMGGLGPHAYT  183 (305)
Q Consensus       106 -~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~  183 (305)
                       +||++|||||.....   .++.+.+.+++.+.+++|+.+++.+++.++++|.+++ +|+||++||..+.   +++..|+
T Consensus        82 ~~iD~li~nag~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~---~~~~~Y~  155 (227)
T PRK08862         82 RAPDVLVNNWTSSPLP---SLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDH---QDLTGVE  155 (227)
T ss_pred             CCCCEEEECCccCCCC---CccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCC---CCcchhH
Confidence             899999999864332   4677889999999999999999999999999998664 6899999997643   5678899


Q ss_pred             hhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCC
Q 021960          184 ASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGT  263 (305)
Q Consensus       184 ~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (305)
                      ++|+++++|+++++.|++++||+||+|+||+++|+....                     .+..+..             
T Consensus       156 asKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~~~~~---------------------~~~~~~~-------------  201 (227)
T PRK08862        156 SSNALVSGFTHSWAKELTPFNIRVGGVVPSIFSANGELD---------------------AVHWAEI-------------  201 (227)
T ss_pred             HHHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCCCccC---------------------HHHHHHH-------------
Confidence            999999999999999999999999999999999983110                     0111111             


Q ss_pred             CCCHHHHHHHHHHhccCCCCceeccEEEe
Q 021960          264 TLRSKDIAEAALYLASDESRYVSGHNLVV  292 (305)
Q Consensus       264 ~~~~~dva~~v~~l~s~~~~~~tG~~i~i  292 (305)
                         .||++..+.||++  ++|+||+.|..
T Consensus       202 ---~~~~~~~~~~l~~--~~~~tg~~~~~  225 (227)
T PRK08862        202 ---QDELIRNTEYIVA--NEYFSGRVVEA  225 (227)
T ss_pred             ---HHHHHhheeEEEe--cccccceEEee
Confidence               1699999999997  66999998864

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=100.00  E-value=2.1e-36  Score=265.25  Aligned_cols=238  Identities=23%  Similarity=0.263  Sum_probs=191.6

Q ss_pred             EEEEecCCCchHHHHHHHHHH----cCCeEEEEecCcchhhhHhhhc----CCCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           33 VAIITGGARGIGEAAVRLFAR----HGAKVVIADVEDTLGSVLASTL----APAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        33 ~vlVtGas~giG~~ia~~l~~----~g~~vv~~~r~~~~~~~~~~~~----~~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      ++|||||++|||+++|++|++    .|++|++++|+....+...+.+    .+.++.++.+|++|.++++++++++.+.+
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   81 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELP   81 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhcc
Confidence            689999999999999999997    7999999999877655544433    23468899999999999999999998877


Q ss_pred             CCc----cEEEEcCCCCCCCCCCCcccC-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC--CCEEEEecccccccCCC
Q 021960          105 GRL----DILYNNAGVLGNQRKHKSIID-FDADEFDNVMRVNVKGMALGIKHAARVMINRG--GGCIISTASVAGVMGGL  177 (305)
Q Consensus       105 g~i----d~li~nag~~~~~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~~~iv~isS~~~~~~~~  177 (305)
                      +.+    |+||||||......  ....+ .+.+++++.+++|+.+++++++.++|.|.+++  .++||++||.++..+.+
T Consensus        82 g~~~~~~~~lv~nAG~~~~~~--~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~~~  159 (256)
T TIGR01500        82 RPKGLQRLLLINNAGTLGDVS--KGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQPFK  159 (256)
T ss_pred             ccCCCceEEEEeCCcccCccc--cccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCCCCC
Confidence            643    69999999753321  12222 35789999999999999999999999997653  47999999999999999


Q ss_pred             CCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhc
Q 021960          178 GPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGL  257 (305)
Q Consensus       178 ~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (305)
                      ++..|+++|+++++|+++++.|++++||+|++|+||+++|+|.....+...+              .+..+.+..     
T Consensus       160 ~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~--------------~~~~~~~~~-----  220 (256)
T TIGR01500       160 GWALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDMQQQVREESVD--------------PDMRKGLQE-----  220 (256)
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchHHHHHHHhcCC--------------hhHHHHHHH-----
Confidence            9999999999999999999999999999999999999999986543221100              011111111     


Q ss_pred             CCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEe
Q 021960          258 GNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVV  292 (305)
Q Consensus       258 ~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~i  292 (305)
                      ..+.+++.+|+|+|+.++||++ ..+++||+++.+
T Consensus       221 ~~~~~~~~~p~eva~~~~~l~~-~~~~~~G~~~~~  254 (256)
T TIGR01500       221 LKAKGKLVDPKVSAQKLLSLLE-KDKFKSGAHVDY  254 (256)
T ss_pred             HHhcCCCCCHHHHHHHHHHHHh-cCCcCCcceeec
Confidence            1456788999999999999997 467999999875

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=100.00  E-value=2.8e-36  Score=266.03  Aligned_cols=239  Identities=26%  Similarity=0.357  Sum_probs=187.1

Q ss_pred             CEEEEecCCCchHHHHHHHHHHcCCeEEEEecC-cchhhhHhhhc---CCCCeEEEEecCCCHHHH----HHHHHHHHHh
Q 021960           32 KVAIITGGARGIGEAAVRLFARHGAKVVIADVE-DTLGSVLASTL---APAPVTFVHCDVSLEEDI----ENLINSTVSR  103 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~-~~~~~~~~~~~---~~~~v~~~~~D~~d~~~i----~~~~~~~~~~  103 (305)
                      ++++||||++|||+++++.|+++|++|+++.|+ +.....+.+.+   .+.++.++.+|++|.+++    +++++++.+.
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~   81 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA   81 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence            589999999999999999999999999987654 33333333322   134577899999999865    5566666677


Q ss_pred             cCCccEEEEcCCCCCCCCCCCcccCCCH-----------HHHHHHHHHHhHHHHHHHHHHHHHHHcC------CCCEEEE
Q 021960          104 YGRLDILYNNAGVLGNQRKHKSIIDFDA-----------DEFDNVMRVNVKGMALGIKHAARVMINR------GGGCIIS  166 (305)
Q Consensus       104 ~g~id~li~nag~~~~~~~~~~~~~~~~-----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~------~~~~iv~  166 (305)
                      ++++|+||||||....    .++.+.+.           +++.+++++|+.+++++++.+.+.|..+      ..++|++
T Consensus        82 ~g~iD~lv~nAG~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~  157 (267)
T TIGR02685        82 FGRCDVLVNNASAFYP----TPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVN  157 (267)
T ss_pred             cCCceEEEECCccCCC----CcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEE
Confidence            8999999999997543    22222222           3689999999999999999999988543      2468999


Q ss_pred             ecccccccCCCCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHH
Q 021960          167 TASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKE  246 (305)
Q Consensus       167 isS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (305)
                      ++|..+..+.+++.+|+++|+++++|+++++.|+.++||+|++|+||+++|+...                    + .+.
T Consensus       158 ~~s~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~~~--------------------~-~~~  216 (267)
T TIGR02685       158 LCDAMTDQPLLGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDAM--------------------P-FEV  216 (267)
T ss_pred             ehhhhccCCCcccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCcccc--------------------c-hhH
Confidence            9999998888999999999999999999999999999999999999999776310                    0 011


Q ss_pred             HHHHHHHHhhcCCCC-CCCCCHHHHHHHHHHhccCCCCceeccEEEecCCccccc
Q 021960          247 VRKMEEFVSGLGNLK-GTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTSR  300 (305)
Q Consensus       247 ~~~~~~~~~~~~~~~-~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~~  300 (305)
                      .+.+.   .  ..+. ++..+|+|+++.++||+++..++++|+.+.+|||+++.+
T Consensus       217 ~~~~~---~--~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~~~v~gg~~~~~  266 (267)
T TIGR02685       217 QEDYR---R--KVPLGQREASAEQIADVVIFLVSPKAKYITGTCIKVDGGLSLTR  266 (267)
T ss_pred             HHHHH---H--hCCCCcCCCCHHHHHHHHHHHhCcccCCcccceEEECCceeccC
Confidence            11111   1  1233 367799999999999999999999999999999998765

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=100.00  E-value=8.9e-36  Score=259.53  Aligned_cols=241  Identities=33%  Similarity=0.538  Sum_probs=200.0

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEec-CcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADV-EDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r-~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      .+++|+++||||+||||.+++++|+++|++|+++.+ +....+...+.+  .+.++.++.+|++|.++++++++++.+.+
T Consensus         3 ~~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (247)
T PRK12935          3 QLNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHF   82 (247)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            467899999999999999999999999999987654 333333332222  23468999999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchh
Q 021960          105 GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTA  184 (305)
Q Consensus       105 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~  184 (305)
                      +++|+||||||....    ..+.+.+.+.+++.+++|+.+++.+++.+++.|.+++.++||++||..+..+.+++..|++
T Consensus        83 ~~id~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~  158 (247)
T PRK12935         83 GKVDILVNNAGITRD----RTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGGFGQTNYSA  158 (247)
T ss_pred             CCCCEEEECCCCCCC----CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCCCCCCcchHH
Confidence            999999999998643    4556778899999999999999999999999998777889999999999888889999999


Q ss_pred             hHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCC
Q 021960          185 SKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT  264 (305)
Q Consensus       185 sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (305)
                      +|+++++++++++.++.+.||+++.|+||+++|++....                  + ........   .  ..+.+.+
T Consensus       159 sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~------------------~-~~~~~~~~---~--~~~~~~~  214 (247)
T PRK12935        159 AKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVAEV------------------P-EEVRQKIV---A--KIPKKRF  214 (247)
T ss_pred             HHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhhc------------------c-HHHHHHHH---H--hCCCCCC
Confidence            999999999999999998999999999999999874321                  1 01111111   1  1345678


Q ss_pred             CCHHHHHHHHHHhccCCCCceeccEEEecCCcc
Q 021960          265 LRSKDIAEAALYLASDESRYVSGHNLVVDGGVT  297 (305)
Q Consensus       265 ~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~  297 (305)
                      ..++|+++.+.|+++.. .+++|+++++|||..
T Consensus       215 ~~~edva~~~~~~~~~~-~~~~g~~~~i~~g~~  246 (247)
T PRK12935        215 GQADEIAKGVVYLCRDG-AYITGQQLNINGGLY  246 (247)
T ss_pred             cCHHHHHHHHHHHcCcc-cCccCCEEEeCCCcc
Confidence            89999999999999764 589999999999963

>PRK06123 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.8e-36  Score=259.31  Aligned_cols=240  Identities=33%  Similarity=0.456  Sum_probs=195.6

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCc-chhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 021960           31 GKVAIITGGARGIGEAAVRLFARHGAKVVIADVED-TLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRYGRL  107 (305)
Q Consensus        31 ~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~-~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~i  107 (305)
                      +|++|||||+++||++++++|+++|++|+++.++. .........+  .+.++.++.+|++|.++++++++++.++++++
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRL   81 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence            57999999999999999999999999988876433 2222222222  23458889999999999999999999999999


Q ss_pred             cEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC---CCEEEEecccccccCCCCC-ccch
Q 021960          108 DILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRG---GGCIISTASVAGVMGGLGP-HAYT  183 (305)
Q Consensus       108 d~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~---~~~iv~isS~~~~~~~~~~-~~Y~  183 (305)
                      |+||||||.....   ..+.+.+.++|++.+++|+.+++.+++.+++.|.++.   +++||++||.++..+.++. ..|+
T Consensus        82 d~li~~ag~~~~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~Y~  158 (248)
T PRK06123         82 DALVNNAGILEAQ---MRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPGEYIDYA  158 (248)
T ss_pred             CEEEECCCCCCCC---CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCCCCccchH
Confidence            9999999976432   3566788999999999999999999999999986542   5789999999988887763 6799


Q ss_pred             hhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCC
Q 021960          184 ASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGT  263 (305)
Q Consensus       184 ~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (305)
                      ++|+++++|++.++.++.++||++++|+||.+.|++......                  ....+.+.   .  ..+.++
T Consensus       159 ~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~~~------------------~~~~~~~~---~--~~p~~~  215 (248)
T PRK06123        159 ASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASGGE------------------PGRVDRVK---A--GIPMGR  215 (248)
T ss_pred             HHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhccCC------------------HHHHHHHH---h--cCCCCC
Confidence            999999999999999999999999999999999997432100                  01111111   1  245677


Q ss_pred             CCCHHHHHHHHHHhccCCCCceeccEEEecCCc
Q 021960          264 TLRSKDIAEAALYLASDESRYVSGHNLVVDGGV  296 (305)
Q Consensus       264 ~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~  296 (305)
                      ..+++|+++.+.|++++...+++|+++.+|||.
T Consensus       216 ~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~gg~  248 (248)
T PRK06123        216 GGTAEEVARAILWLLSDEASYTTGTFIDVSGGR  248 (248)
T ss_pred             CcCHHHHHHHHHHHhCccccCccCCEEeecCCC
Confidence            789999999999999998889999999999973

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=100.00  E-value=9.8e-36  Score=258.16  Aligned_cols=238  Identities=29%  Similarity=0.419  Sum_probs=200.9

Q ss_pred             CEEEEecCCCchHHHHHHHHHHcCCeEEEEec-CcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 021960           32 KVAIITGGARGIGEAAVRLFARHGAKVVIADV-EDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRYGRLD  108 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r-~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id  108 (305)
                      |++|||||+++||+++++.|+++|++|+++.| +....+......  .+.++.++.+|++|.++++++++++.+.++++|
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPID   80 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCc
Confidence            68999999999999999999999999998887 333332222221  234688999999999999999999999999999


Q ss_pred             EEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhHHH
Q 021960          109 ILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHA  188 (305)
Q Consensus       109 ~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKaa  188 (305)
                      +||||||....    ..+.+.+.+++++.+++|+.+++.+++++++.|.+++.++||++||..+..+.+++..|+++|++
T Consensus        81 ~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sk~a  156 (242)
T TIGR01829        81 VLVNNAGITRD----ATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQKGQFGQTNYSAAKAG  156 (242)
T ss_pred             EEEECCCCCCC----CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCCcchhHHHHHH
Confidence            99999997643    45667788999999999999999999999999988888899999999999888899999999999


Q ss_pred             HHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCCHH
Q 021960          189 IVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSK  268 (305)
Q Consensus       189 ~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (305)
                      ++.++++++.++...|+++++++||+++|++.....                   ......   +..  ..+.+++.+|+
T Consensus       157 ~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~-------------------~~~~~~---~~~--~~~~~~~~~~~  212 (242)
T TIGR01829       157 MIGFTKALAQEGATKGVTVNTISPGYIATDMVMAMR-------------------EDVLNS---IVA--QIPVGRLGRPE  212 (242)
T ss_pred             HHHHHHHHHHHhhhhCeEEEEEeeCCCcCccccccc-------------------hHHHHH---HHh--cCCCCCCcCHH
Confidence            999999999999989999999999999999753210                   011111   111  24667888999


Q ss_pred             HHHHHHHHhccCCCCceeccEEEecCCcc
Q 021960          269 DIAEAALYLASDESRYVSGHNLVVDGGVT  297 (305)
Q Consensus       269 dva~~v~~l~s~~~~~~tG~~i~idgG~~  297 (305)
                      |+++.+.||++++..+++|++|.+|||.+
T Consensus       213 ~~a~~~~~l~~~~~~~~~G~~~~~~gg~~  241 (242)
T TIGR01829       213 EIAAAVAFLASEEAGYITGATLSINGGLY  241 (242)
T ss_pred             HHHHHHHHHcCchhcCccCCEEEecCCcc
Confidence            99999999999988899999999999975

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=100.00  E-value=9.9e-36  Score=258.59  Aligned_cols=239  Identities=27%  Similarity=0.428  Sum_probs=202.1

Q ss_pred             CEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcch-hhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 021960           32 KVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTL-GSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRYGRLD  108 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~-~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id  108 (305)
                      |++|||||+++||+++++.|+++|++|++++|+... ........  .+.++.++.+|++|.++++++++++.+.++++|
T Consensus         3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id   82 (245)
T PRK12824          3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPVD   82 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            689999999999999999999999999999887531 11111111  234688999999999999999999999999999


Q ss_pred             EEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhHHH
Q 021960          109 ILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHA  188 (305)
Q Consensus       109 ~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKaa  188 (305)
                      ++|||+|....    ..+.+.+.+++++.+++|+.+++++++.+++.|.+++.++||++||..+..+.++...|+++|++
T Consensus        83 ~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~Y~~sK~a  158 (245)
T PRK12824         83 ILVNNAGITRD----SVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKGQFGQTNYSAAKAG  158 (245)
T ss_pred             EEEECCCCCCC----CccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccCCCCChHHHHHHHH
Confidence            99999998643    45677899999999999999999999999999988888999999999999888899999999999


Q ss_pred             HHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCCHH
Q 021960          189 IVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSK  268 (305)
Q Consensus       189 ~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (305)
                      ++++++.++.++.++|++++.++||+++|++.....                   ......+.   .  ..+.+...+++
T Consensus       159 ~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~-------------------~~~~~~~~---~--~~~~~~~~~~~  214 (245)
T PRK12824        159 MIGFTKALASEGARYGITVNCIAPGYIATPMVEQMG-------------------PEVLQSIV---N--QIPMKRLGTPE  214 (245)
T ss_pred             HHHHHHHHHHHHHHhCeEEEEEEEcccCCcchhhcC-------------------HHHHHHHH---h--cCCCCCCCCHH
Confidence            999999999999999999999999999999753220                   01111111   1  24567788999


Q ss_pred             HHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          269 DIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       269 dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      |+++.+.||+++...+++|+++.+|||..+
T Consensus       215 ~va~~~~~l~~~~~~~~~G~~~~~~~g~~~  244 (245)
T PRK12824        215 EIAAAVAFLVSEAAGFITGETISINGGLYM  244 (245)
T ss_pred             HHHHHHHHHcCccccCccCcEEEECCCeec
Confidence            999999999998888999999999999753

>PRK05599 hypothetical protein; Provisional

Probab=100.00  E-value=5.5e-36  Score=261.16  Aligned_cols=222  Identities=20%  Similarity=0.233  Sum_probs=186.9

Q ss_pred             CEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc---CCCCeEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 021960           32 KVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL---APAPVTFVHCDVSLEEDIENLINSTVSRYGRLD  108 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~---~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id  108 (305)
                      +++|||||++|||+++|++|+ +|++|++++|+....+.+.+.+   ...++.++.||++|.++++++++++.+.+|++|
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id   79 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEIS   79 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCC
Confidence            579999999999999999999 5999999999877665554433   123478899999999999999999999999999


Q ss_pred             EEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-CCEEEEecccccccCCCCCccchhhHH
Q 021960          109 ILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRG-GGCIISTASVAGVMGGLGPHAYTASKH  187 (305)
Q Consensus       109 ~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sKa  187 (305)
                      ++|||||....    .++.+.+.+.+++.+++|+.+++++++.++|.|.+++ +|+||++||.++..+.++...|+++|+
T Consensus        80 ~lv~nag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKa  155 (246)
T PRK05599         80 LAVVAFGILGD----QERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRARRANYVYGSTKA  155 (246)
T ss_pred             EEEEecCcCCC----chhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccCCcCCcchhhHHH
Confidence            99999998643    2345567788889999999999999999999997764 689999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCCH
Q 021960          188 AIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRS  267 (305)
Q Consensus       188 a~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (305)
                      |+++|+++++.|++++||+|++|+||+++|+|.....                                   +.....+|
T Consensus       156 a~~~~~~~la~el~~~~I~v~~v~PG~v~T~~~~~~~-----------------------------------~~~~~~~p  200 (246)
T PRK05599        156 GLDAFCQGLADSLHGSHVRLIIARPGFVIGSMTTGMK-----------------------------------PAPMSVYP  200 (246)
T ss_pred             HHHHHHHHHHHHhcCCCceEEEecCCcccchhhcCCC-----------------------------------CCCCCCCH
Confidence            9999999999999999999999999999999843210                                   00112589


Q ss_pred             HHHHHHHHHhccCCCCceeccEEEecCCc
Q 021960          268 KDIAEAALYLASDESRYVSGHNLVVDGGV  296 (305)
Q Consensus       268 ~dva~~v~~l~s~~~~~~tG~~i~idgG~  296 (305)
                      ||+|+.+++++++...   ++.+.++++.
T Consensus       201 e~~a~~~~~~~~~~~~---~~~~~~~~~~  226 (246)
T PRK05599        201 RDVAAAVVSAITSSKR---STTLWIPGRL  226 (246)
T ss_pred             HHHHHHHHHHHhcCCC---CceEEeCccH
Confidence            9999999999987642   5567788775

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.9e-35  Score=258.67  Aligned_cols=244  Identities=27%  Similarity=0.328  Sum_probs=201.4

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcch-hhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 021960           31 GKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTL-GSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRYGRL  107 (305)
Q Consensus        31 ~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~-~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~i  107 (305)
                      .|++|||||+|+||+++++.|+++|++|++++|+... .....+..  .+.++.++.+|++|.+++.++++++.+.++++
T Consensus         2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (256)
T PRK12745          2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRI   81 (256)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence            4799999999999999999999999999999886432 22222221  23468899999999999999999999999999


Q ss_pred             cEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC------CCEEEEecccccccCCCCCcc
Q 021960          108 DILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRG------GGCIISTASVAGVMGGLGPHA  181 (305)
Q Consensus       108 d~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~------~~~iv~isS~~~~~~~~~~~~  181 (305)
                      |++|||||.....  ..++.+.+.+++++.+++|+.+++++++.+.+.|.++.      .++||++||..+..+.++...
T Consensus        82 d~vi~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~  159 (256)
T PRK12745         82 DCLVNNAGVGVKV--RGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSPNRGE  159 (256)
T ss_pred             CEEEECCccCCCC--CCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCCCCCcc
Confidence            9999999975432  14567788999999999999999999999999997654      357999999999988888999


Q ss_pred             chhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCC
Q 021960          182 YTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLK  261 (305)
Q Consensus       182 Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (305)
                      |+++|+++++++++++.++.++|+++++|+||.++|++......                   .....+.    ....+.
T Consensus       160 Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~-------------------~~~~~~~----~~~~~~  216 (256)
T PRK12745        160 YCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAPVTA-------------------KYDALIA----KGLVPM  216 (256)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccccccch-------------------hHHhhhh----hcCCCc
Confidence            99999999999999999999899999999999999987432100                   0001111    112456


Q ss_pred             CCCCCHHHHHHHHHHhccCCCCceeccEEEecCCcccc
Q 021960          262 GTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTS  299 (305)
Q Consensus       262 ~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~  299 (305)
                      +++.+++|+++.+.+++++...+++|++|.+|||.+..
T Consensus       217 ~~~~~~~d~a~~i~~l~~~~~~~~~G~~~~i~gg~~~~  254 (256)
T PRK12745        217 PRWGEPEDVARAVAALASGDLPYSTGQAIHVDGGLSIP  254 (256)
T ss_pred             CCCcCHHHHHHHHHHHhCCcccccCCCEEEECCCeecc
Confidence            77889999999999999988889999999999998764

>PRK07774 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.6e-35  Score=255.39  Aligned_cols=244  Identities=33%  Similarity=0.486  Sum_probs=201.2

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhcC
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRYG  105 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g  105 (305)
                      .+++|++|||||+|+||++++++|+++|++|++++|+......+.+.+  ...++.++.+|++|.++++.+++++.+.++
T Consensus         3 ~~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   82 (250)
T PRK07774          3 RFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFG   82 (250)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            467899999999999999999999999999999999865544443332  233578899999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhh
Q 021960          106 RLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTAS  185 (305)
Q Consensus       106 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  185 (305)
                      ++|+||||||..... ...++.+.+.+.+++.+++|+.+++++++.+++.|.+.+.++||++||..++.   +...|+++
T Consensus        83 ~id~vi~~ag~~~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~---~~~~Y~~s  158 (250)
T PRK07774         83 GIDYLVNNAAIYGGM-KLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWL---YSNFYGLA  158 (250)
T ss_pred             CCCEEEECCCCcCCC-CCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccC---CccccHHH
Confidence            999999999986432 12456677899999999999999999999999999887789999999987754   35689999


Q ss_pred             HHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCC
Q 021960          186 KHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL  265 (305)
Q Consensus       186 Kaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (305)
                      |++++.+++++++++...||++++++||.++|++....                  +.+...   ....+.  .+.....
T Consensus       159 K~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~------------------~~~~~~---~~~~~~--~~~~~~~  215 (250)
T PRK07774        159 KVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTV------------------TPKEFV---ADMVKG--IPLSRMG  215 (250)
T ss_pred             HHHHHHHHHHHHHHhCccCeEEEEEecCcccCcccccc------------------CCHHHH---HHHHhc--CCCCCCc
Confidence            99999999999999998999999999999999974321                  111111   112222  3445677


Q ss_pred             CHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          266 RSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       266 ~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      +++|+++.+++++++....++|+++++|+|.++
T Consensus       216 ~~~d~a~~~~~~~~~~~~~~~g~~~~v~~g~~~  248 (250)
T PRK07774        216 TPEDLVGMCLFLLSDEASWITGQIFNVDGGQII  248 (250)
T ss_pred             CHHHHHHHHHHHhChhhhCcCCCEEEECCCeec
Confidence            999999999999998777789999999999765

>PRK07060 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.7e-35  Score=255.09  Aligned_cols=239  Identities=36%  Similarity=0.504  Sum_probs=199.2

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCC
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGR  106 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~  106 (305)
                      .++++++++||||+++||+++++.|+++|++|++++|+.+..+.+.+..   .+.++.+|++|.++++++++.    .++
T Consensus         5 ~~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~---~~~~~~~D~~~~~~v~~~~~~----~~~   77 (245)
T PRK07060          5 FDFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGET---GCEPLRLDVGDDAAIRAALAA----AGA   77 (245)
T ss_pred             cccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCeEEEecCCCHHHHHHHHHH----hCC
Confidence            3578899999999999999999999999999999999876554443322   256788999999988887765    468


Q ss_pred             ccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-CCEEEEecccccccCCCCCccchhh
Q 021960          107 LDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRG-GGCIISTASVAGVMGGLGPHAYTAS  185 (305)
Q Consensus       107 id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~~s  185 (305)
                      +|+||||||....    ....+.+.+++++.+++|+.+++.+++.+++.+.+++ .++||++||..+..+.+....|+++
T Consensus        78 ~d~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~s  153 (245)
T PRK07060         78 FDGLVNCAGIASL----ESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGLPDHLAYCAS  153 (245)
T ss_pred             CCEEEECCCCCCC----CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCCCCCcHhHHH
Confidence            9999999998543    4556678899999999999999999999999887654 4899999999999998899999999


Q ss_pred             HHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCC
Q 021960          186 KHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL  265 (305)
Q Consensus       186 Kaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (305)
                      |++++.+++.++.++.+.|+++++++||++.|++....|..                 ......+   ..  ..+.+++.
T Consensus       154 K~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~-----------------~~~~~~~---~~--~~~~~~~~  211 (245)
T PRK07060        154 KAALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAEAWSD-----------------PQKSGPM---LA--AIPLGRFA  211 (245)
T ss_pred             HHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhhhccC-----------------HHHHHHH---Hh--cCCCCCCC
Confidence            99999999999999988899999999999999985543322                 0111111   11  24567889


Q ss_pred             CHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          266 RSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       266 ~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      +++|+++.+.+++++..++++|++|.+|||+.+
T Consensus       212 ~~~d~a~~~~~l~~~~~~~~~G~~~~~~~g~~~  244 (245)
T PRK07060        212 EVDDVAAPILFLLSDAASMVSGVSLPVDGGYTA  244 (245)
T ss_pred             CHHHHHHHHHHHcCcccCCccCcEEeECCCccC
Confidence            999999999999999889999999999999754

>PRK12746 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.5e-35  Score=256.11  Aligned_cols=243  Identities=29%  Similarity=0.412  Sum_probs=199.7

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEE-ecCcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIA-DVEDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~-~r~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      ++++++++||||+||||++++++|+++|++|++. .|+....+......  .+.++.++.+|++|.+++.++++++.+++
T Consensus         3 ~~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~   82 (254)
T PRK12746          3 NLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNEL   82 (254)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHh
Confidence            4678999999999999999999999999998775 56654433333222  23468899999999999999999998876


Q ss_pred             ------CCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCC
Q 021960          105 ------GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLG  178 (305)
Q Consensus       105 ------g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~  178 (305)
                            +++|++|||||....    ..+.+.+.+.+++.+++|+.+++++++.+++.+.+  .+++|++||..+..+.++
T Consensus        83 ~~~~~~~~id~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~~v~~sS~~~~~~~~~  156 (254)
T PRK12746         83 QIRVGTSEIDILVNNAGIGTQ----GTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRA--EGRVINISSAEVRLGFTG  156 (254)
T ss_pred             ccccCCCCccEEEECCCCCCC----CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc--CCEEEEECCHHhcCCCCC
Confidence                  479999999997543    45667899999999999999999999999998844  479999999999988899


Q ss_pred             CccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcC
Q 021960          179 PHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLG  258 (305)
Q Consensus       179 ~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (305)
                      +..|+++|+++++++++++.++.+++++++.|+||+++|++..+....                 .+..    .+... .
T Consensus       157 ~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~-----------------~~~~----~~~~~-~  214 (254)
T PRK12746        157 SIAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLDD-----------------PEIR----NFATN-S  214 (254)
T ss_pred             CcchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhhccC-----------------hhHH----HHHHh-c
Confidence            999999999999999999999999999999999999999985432111                 1111    11111 2


Q ss_pred             CCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          259 NLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       259 ~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      ...++..+++|+++.+.+++++...+++|++++++||+++
T Consensus       215 ~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~i~~~~~~  254 (254)
T PRK12746        215 SVFGRIGQVEDIADAVAFLASSDSRWVTGQIIDVSGGFCL  254 (254)
T ss_pred             CCcCCCCCHHHHHHHHHHHcCcccCCcCCCEEEeCCCccC
Confidence            3457778999999999999998888899999999999753

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=100.00  E-value=3e-35  Score=288.86  Aligned_cols=257  Identities=33%  Similarity=0.503  Sum_probs=209.1

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc----CCCCeEEEEecCCCHHHHHHHHHHHH
Q 021960           26 HRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL----APAPVTFVHCDVSLEEDIENLINSTV  101 (305)
Q Consensus        26 ~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~----~~~~v~~~~~D~~d~~~i~~~~~~~~  101 (305)
                      ...+++|++|||||++|||++++++|+++|++|++++|+....+...+.+    ...++..+.+|++|.++++++++++.
T Consensus       409 ~~~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~  488 (676)
T TIGR02632       409 EKTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVA  488 (676)
T ss_pred             CcCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHH
Confidence            34678999999999999999999999999999999999866554433322    22357889999999999999999999


Q ss_pred             HhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-CCEEEEecccccccCCCCCc
Q 021960          102 SRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRG-GGCIISTASVAGVMGGLGPH  180 (305)
Q Consensus       102 ~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~  180 (305)
                      +.+|++|+||||||....    .++.+.+.++|+..+++|+.+++++++.+++.|.+++ .++||++||..+..+.++..
T Consensus       489 ~~~g~iDilV~nAG~~~~----~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~~~~~  564 (676)
T TIGR02632       489 LAYGGVDIVVNNAGIATS----SPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAGKNAS  564 (676)
T ss_pred             HhcCCCcEEEECCCCCCC----CCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCCCCCH
Confidence            999999999999997543    4567788999999999999999999999999998765 57999999999999999999


Q ss_pred             cchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccc--cchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcC
Q 021960          181 AYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATS--MLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLG  258 (305)
Q Consensus       181 ~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (305)
                      .|+++|+++++++++++.|++++||+||+|+||.+.|.  ++...|..       .+...++++.++.    ..+... .
T Consensus       565 aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~~~~~~-------~~~~~~~~~~~~~----~~~~~~-r  632 (676)
T TIGR02632       565 AYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWDGEWRE-------ERAAAYGIPADEL----EEHYAK-R  632 (676)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCceecCcccccccchh-------hhhhcccCChHHH----HHHHHh-c
Confidence            99999999999999999999999999999999999653  32211110       0111122222211    111111 3


Q ss_pred             CCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          259 NLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       259 ~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      .+.++.++|+|+|+.+.||+++...++||++|.+|||...
T Consensus       633 ~~l~r~v~peDVA~av~~L~s~~~~~~TG~~i~vDGG~~~  672 (676)
T TIGR02632       633 TLLKRHIFPADIAEAVFFLASSKSEKTTGCIITVDGGVPA  672 (676)
T ss_pred             CCcCCCcCHHHHHHHHHHHhCCcccCCcCcEEEECCCchh
Confidence            6778889999999999999998888999999999999764

>PRK07074 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-34  Score=253.76  Aligned_cols=243  Identities=28%  Similarity=0.431  Sum_probs=202.8

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEE
Q 021960           31 GKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDIL  110 (305)
Q Consensus        31 ~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~l  110 (305)
                      +|++|||||+|+||+++++.|+++|++|++++|+....+.+.+.+.+.++.++.+|++|.+++..+++++.+.++++|++
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v   81 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDVL   81 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            57999999999999999999999999999999987666555544445568899999999999999999999999999999


Q ss_pred             EEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhHHHHH
Q 021960          111 YNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIV  190 (305)
Q Consensus       111 i~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKaa~~  190 (305)
                      |||+|....    .++.+.+.+++++.+.+|+.+++.+++++++.+.+++.++||++||..+..+ .+...|+.+|++++
T Consensus        82 i~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-~~~~~y~~sK~a~~  156 (257)
T PRK07074         82 VANAGAARA----ASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMAA-LGHPAYSAAKAGLI  156 (257)
T ss_pred             EECCCCCCC----CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcCC-CCCcccHHHHHHHH
Confidence            999997643    3556678899999999999999999999999998888899999999876543 35678999999999


Q ss_pred             HHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCCHHHH
Q 021960          191 GLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSKDI  270 (305)
Q Consensus       191 ~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv  270 (305)
                      .++++++.+++++|++|+.++||+++|++.......                ..+.....   ..  ..+.+++..++|+
T Consensus       157 ~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~----------------~~~~~~~~---~~--~~~~~~~~~~~d~  215 (257)
T PRK07074        157 HYTKLLAVEYGRFGIRANAVAPGTVKTQAWEARVAA----------------NPQVFEEL---KK--WYPLQDFATPDDV  215 (257)
T ss_pred             HHHHHHHHHHhHhCeEEEEEEeCcCCcchhhccccc----------------ChHHHHHH---Hh--cCCCCCCCCHHHH
Confidence            999999999999999999999999999874321110                00111111   11  2456788999999


Q ss_pred             HHHHHHhccCCCCceeccEEEecCCcccc
Q 021960          271 AEAALYLASDESRYVSGHNLVVDGGVTTS  299 (305)
Q Consensus       271 a~~v~~l~s~~~~~~tG~~i~idgG~~~~  299 (305)
                      ++.+++|+++...+++|+.+.+|||+...
T Consensus       216 a~~~~~l~~~~~~~~~g~~~~~~~g~~~~  244 (257)
T PRK07074        216 ANAVLFLASPAARAITGVCLPVDGGLTAG  244 (257)
T ss_pred             HHHHHHHcCchhcCcCCcEEEeCCCcCcC
Confidence            99999999988889999999999998764

>PRK06198 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1e-34  Score=254.77  Aligned_cols=249  Identities=35%  Similarity=0.442  Sum_probs=204.0

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCe-EEEEecCcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAK-VVIADVEDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~-vv~~~r~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      .+++|+++||||+++||++++++|+++|++ |++++|+..........+  .+.++.++.+|++|.++++++++.+.+.+
T Consensus         3 ~~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (260)
T PRK06198          3 RLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAF   82 (260)
T ss_pred             CCCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            468899999999999999999999999999 999998765444332222  24468889999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-CCEEEEecccccccCCCCCccch
Q 021960          105 GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRG-GGCIISTASVAGVMGGLGPHAYT  183 (305)
Q Consensus       105 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~  183 (305)
                      +++|+||||+|....    ..+.+.+.+.+++.+++|+.+++.+++.+++.|.+++ .+++|++||..+..+.++...|+
T Consensus        83 g~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~  158 (260)
T PRK06198         83 GRLDALVNAAGLTDR----GTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQPFLAAYC  158 (260)
T ss_pred             CCCCEEEECCCcCCC----CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCCCCcchhH
Confidence            999999999997543    4566788999999999999999999999999997654 58999999999988888899999


Q ss_pred             hhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCC
Q 021960          184 ASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGT  263 (305)
Q Consensus       184 ~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (305)
                      .+|+++++++++++.|+...+|+++.|+||++.|++........           .... ......   ...  ..+.++
T Consensus       159 ~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~~~~-----------~~~~-~~~~~~---~~~--~~~~~~  221 (260)
T PRK06198        159 ASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQREF-----------HGAP-DDWLEK---AAA--TQPFGR  221 (260)
T ss_pred             HHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcchhhhhhhc-----------cCCC-hHHHHH---Hhc--cCCccC
Confidence            99999999999999999999999999999999999743211100           0000 011111   111  245677


Q ss_pred             CCCHHHHHHHHHHhccCCCCceeccEEEecCCcc
Q 021960          264 TLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT  297 (305)
Q Consensus       264 ~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~  297 (305)
                      ..+++|+++.+.+++++..++++|++|.+|||..
T Consensus       222 ~~~~~~~a~~~~~l~~~~~~~~~G~~~~~~~~~~  255 (260)
T PRK06198        222 LLDPDEVARAVAFLLSDESGLMTGSVIDFDQSVW  255 (260)
T ss_pred             CcCHHHHHHHHHHHcChhhCCccCceEeECCccc
Confidence            8899999999999999988899999999999963

>PRK07109 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2e-35  Score=268.45  Aligned_cols=238  Identities=29%  Similarity=0.339  Sum_probs=197.6

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      ..+++|++|||||++|||+++++.|+++|++|++++|++...+...+.+  .+.++.++.+|++|.++++++++++.+++
T Consensus         4 ~~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~   83 (334)
T PRK07109          4 KPIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEEL   83 (334)
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHC
Confidence            3567899999999999999999999999999999999876655444333  24568899999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchh
Q 021960          105 GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTA  184 (305)
Q Consensus       105 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~  184 (305)
                      +++|++|||||....    .++.+.+.+++++.+++|+.+++++++.+++.|.+++.++||++||..+..+.+....|++
T Consensus        84 g~iD~lInnAg~~~~----~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~a  159 (334)
T PRK07109         84 GPIDTWVNNAMVTVF----GPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRSIPLQSAYCA  159 (334)
T ss_pred             CCCCEEEECCCcCCC----CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccCCCcchHHHH
Confidence            999999999997533    5677889999999999999999999999999998888899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCc--CCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCC
Q 021960          185 SKHAIVGLTKNAACELGR--YGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKG  262 (305)
Q Consensus       185 sKaa~~~~~~~la~e~~~--~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (305)
                      +|+++++|+++++.|+..  .+|+++.|+||.++|++.......                           ......+..
T Consensus       160 sK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~~~~~~---------------------------~~~~~~~~~  212 (334)
T PRK07109        160 AKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFDWARSR---------------------------LPVEPQPVP  212 (334)
T ss_pred             HHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhhhhhhh---------------------------ccccccCCC
Confidence            999999999999999974  479999999999999975321000                           000012345


Q ss_pred             CCCCHHHHHHHHHHhccCCCC--ceeccEEEecCC
Q 021960          263 TTLRSKDIAEAALYLASDESR--YVSGHNLVVDGG  295 (305)
Q Consensus       263 ~~~~~~dva~~v~~l~s~~~~--~~tG~~i~idgG  295 (305)
                      +..+|+|+|+.+++++++..+  ++.+....++.+
T Consensus       213 ~~~~pe~vA~~i~~~~~~~~~~~~vg~~~~~~~~~  247 (334)
T PRK07109        213 PIYQPEVVADAILYAAEHPRRELWVGGPAKAAILG  247 (334)
T ss_pred             CCCCHHHHHHHHHHHHhCCCcEEEeCcHHHHHHHH
Confidence            677999999999999987533  355555554444

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.6e-34  Score=251.20  Aligned_cols=242  Identities=38%  Similarity=0.581  Sum_probs=205.0

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEE-ecCcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIA-DVEDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~-~r~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      ++.+|++|||||+|+||+++++.|+++|++|+++ +|+..........+  .+.++.++.+|++|.++++++++++.+.+
T Consensus         2 ~~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (247)
T PRK05565          2 KLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKF   81 (247)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            4678999999999999999999999999999988 88765544433332  23468899999999999999999999988


Q ss_pred             CCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchh
Q 021960          105 GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTA  184 (305)
Q Consensus       105 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~  184 (305)
                      +++|+||||+|....    ..+.+.+.+.+++.+++|+.+++.+++.+.+.+.+++.+++|++||..+..+.+....|+.
T Consensus        82 ~~id~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~~y~~  157 (247)
T PRK05565         82 GKIDILVNNAGISNF----GLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGASCEVLYSA  157 (247)
T ss_pred             CCCCEEEECCCcCCC----CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCCCCccHHHH
Confidence            999999999998632    4566778999999999999999999999999998888899999999999988888999999


Q ss_pred             hHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCC
Q 021960          185 SKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT  264 (305)
Q Consensus       185 sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (305)
                      +|++++.++++++.++..+|+++++|+||+++|++.....+.                   ......   .  ..+.++.
T Consensus       158 sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~~~~-------------------~~~~~~---~--~~~~~~~  213 (247)
T PRK05565        158 SKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSSFSEE-------------------DKEGLA---E--EIPLGRL  213 (247)
T ss_pred             HHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCccccccChH-------------------HHHHHH---h--cCCCCCC
Confidence            999999999999999988999999999999999875332110                   001111   1  1345667


Q ss_pred             CCHHHHHHHHHHhccCCCCceeccEEEecCCcc
Q 021960          265 LRSKDIAEAALYLASDESRYVSGHNLVVDGGVT  297 (305)
Q Consensus       265 ~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~  297 (305)
                      .+++++++.+++++++....++|+++.+|+|++
T Consensus       214 ~~~~~va~~~~~l~~~~~~~~~g~~~~~~~~~~  246 (247)
T PRK05565        214 GKPEEIAKVVLFLASDDASYITGQIITVDGGWT  246 (247)
T ss_pred             CCHHHHHHHHHHHcCCccCCccCcEEEecCCcc
Confidence            899999999999999998999999999999974

>PRK05876 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.6e-35  Score=257.68  Aligned_cols=191  Identities=32%  Similarity=0.519  Sum_probs=171.7

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhcC
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRYG  105 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g  105 (305)
                      .+++|++|||||++|||+++++.|+++|++|++++|+....+...+.+  .+.++.++.+|++|.++++++++++.+.++
T Consensus         3 ~~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   82 (275)
T PRK05876          3 GFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLG   82 (275)
T ss_pred             CcCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            478999999999999999999999999999999998876655444333  234688899999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-CCEEEEecccccccCCCCCccchh
Q 021960          106 RLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRG-GGCIISTASVAGVMGGLGPHAYTA  184 (305)
Q Consensus       106 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~~  184 (305)
                      ++|+||||||....    .++.+.+.++|++.+++|+.+++++++.++|.|.+++ +|+||++||..+..+.++...|++
T Consensus        83 ~id~li~nAg~~~~----~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  158 (275)
T PRK05876         83 HVDVVFSNAGIVVG----GPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGV  158 (275)
T ss_pred             CCCEEEECCCcCCC----CCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccCCCCCchHHH
Confidence            99999999998543    5677889999999999999999999999999997765 689999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchh
Q 021960          185 SKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVN  222 (305)
Q Consensus       185 sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~  222 (305)
                      +|+++++|+++++.|+..+||+|++|+||+++|++..+
T Consensus       159 sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~  196 (275)
T PRK05876        159 AKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVAN  196 (275)
T ss_pred             HHHHHHHHHHHHHHHhhhcCcEEEEEEeCccccccccc
Confidence            99999999999999999899999999999999998543

>PRK06182 short chain dehydrogenase; Validated

Probab=100.00  E-value=1.3e-34  Score=256.23  Aligned_cols=236  Identities=26%  Similarity=0.250  Sum_probs=189.8

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 021960           29 LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLD  108 (305)
Q Consensus        29 l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id  108 (305)
                      +++|+++||||+||||++++++|+++|++|++++|+......+..    ..+.++.+|++|.++++++++++.+.++++|
T Consensus         1 ~~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~~----~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id   76 (273)
T PRK06182          1 MQKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLAS----LGVHPLSLDVTDEASIKAAVDTIIAEEGRID   76 (273)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh----CCCeEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence            357899999999999999999999999999999998765443322    2378899999999999999999999999999


Q ss_pred             EEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhHHH
Q 021960          109 ILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHA  188 (305)
Q Consensus       109 ~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKaa  188 (305)
                      +||||||....    .++.+.+.+++++.+++|+.+++.+++.+++.|.+++.++||++||..+..+.+....|+++|++
T Consensus        77 ~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa  152 (273)
T PRK06182         77 VLVNNAGYGSY----GAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKIYTPLGAWYHATKFA  152 (273)
T ss_pred             EEEECCCcCCC----CchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcCCCCCccHhHHHHHH
Confidence            99999998643    56778899999999999999999999999999988888999999999988888888899999999


Q ss_pred             HHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCCHH
Q 021960          189 IVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSK  268 (305)
Q Consensus       189 ~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (305)
                      +++|+++++.|+.++||++++|+||+++|++...........       ....+..+..+.+...... ..+.++..+|+
T Consensus       153 ~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~  224 (273)
T PRK06182        153 LEGFSDALRLEVAPFGIDVVVIEPGGIKTEWGDIAADHLLKT-------SGNGAYAEQAQAVAASMRS-TYGSGRLSDPS  224 (273)
T ss_pred             HHHHHHHHHHHhcccCCEEEEEecCCcccccchhhhhhhccc-------ccccchHHHHHHHHHHHHH-hhccccCCCHH
Confidence            999999999999999999999999999999853221110000       0000111111111111111 13456788999


Q ss_pred             HHHHHHHHhccC
Q 021960          269 DIAEAALYLASD  280 (305)
Q Consensus       269 dva~~v~~l~s~  280 (305)
                      |+|+.++++++.
T Consensus       225 ~vA~~i~~~~~~  236 (273)
T PRK06182        225 VIADAISKAVTA  236 (273)
T ss_pred             HHHHHHHHHHhC
Confidence            999999999985

>PRK09134 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.8e-34  Score=251.87  Aligned_cols=237  Identities=24%  Similarity=0.281  Sum_probs=193.7

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCc-chhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVED-TLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~-~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      ...+|++|||||++|||+++++.|+++|++|+++.++. ...+.....+  .+.++.++.+|++|.++++++++++.+.+
T Consensus         6 ~~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~   85 (258)
T PRK09134          6 MAAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAAL   85 (258)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            34688999999999999999999999999998876543 3333232222  24568899999999999999999999989


Q ss_pred             CCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchh
Q 021960          105 GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTA  184 (305)
Q Consensus       105 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~  184 (305)
                      +++|+||||||....    .++.+.+++++++.+++|+.+++++++.+.+.+.+...+++|+++|..+..+.+++..|++
T Consensus        86 ~~iD~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~~p~~~~Y~~  161 (258)
T PRK09134         86 GPITLLVNNASLFEY----DSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNLNPDFLSYTL  161 (258)
T ss_pred             CCCCEEEECCcCCCC----CccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCCCCCchHHHH
Confidence            999999999997643    4566789999999999999999999999999998777789999999877777788889999


Q ss_pred             hHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCC
Q 021960          185 SKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT  264 (305)
Q Consensus       185 sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (305)
                      +|++++++++.++.++.+. |+|++|+||++.|.....                     .....   ....  ..+.++.
T Consensus       162 sK~a~~~~~~~la~~~~~~-i~v~~i~PG~v~t~~~~~---------------------~~~~~---~~~~--~~~~~~~  214 (258)
T PRK09134        162 SKAALWTATRTLAQALAPR-IRVNAIGPGPTLPSGRQS---------------------PEDFA---RQHA--ATPLGRG  214 (258)
T ss_pred             HHHHHHHHHHHHHHHhcCC-cEEEEeecccccCCcccC---------------------hHHHH---HHHh--cCCCCCC
Confidence            9999999999999999765 999999999998864110                     01111   1111  2455677


Q ss_pred             CCHHHHHHHHHHhccCCCCceeccEEEecCCcc
Q 021960          265 LRSKDIAEAALYLASDESRYVSGHNLVVDGGVT  297 (305)
Q Consensus       265 ~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~  297 (305)
                      .+++|+|+.++++++.  .+++|+.+.+|||..
T Consensus       215 ~~~~d~a~~~~~~~~~--~~~~g~~~~i~gg~~  245 (258)
T PRK09134        215 STPEEIAAAVRYLLDA--PSVTGQMIAVDGGQH  245 (258)
T ss_pred             cCHHHHHHHHHHHhcC--CCcCCCEEEECCCee
Confidence            8999999999999984  468999999999964

>PRK12828 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-34  Score=250.55  Aligned_cols=236  Identities=30%  Similarity=0.382  Sum_probs=201.0

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCC
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGR  106 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~  106 (305)
                      .++++|++|||||+|+||+++++.|+++|++|++++|+...............+.++.+|++|.++++.+++++.+.+++
T Consensus         3 ~~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (239)
T PRK12828          3 HSLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGR   82 (239)
T ss_pred             CCCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCC
Confidence            35789999999999999999999999999999999997655433333333334677889999999999999999999999


Q ss_pred             ccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhH
Q 021960          107 LDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASK  186 (305)
Q Consensus       107 id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  186 (305)
                      +|+|||++|....    ..+.+.+.+++++.+++|+.+++.+++++.+.+.+++.++||++||..+..+.+....|+++|
T Consensus        83 ~d~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sk  158 (239)
T PRK12828         83 LDALVNIAGAFVW----GTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKAGPGMGAYAAAK  158 (239)
T ss_pred             cCEEEECCcccCc----CChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccCCCCcchhHHHH
Confidence            9999999997543    345567889999999999999999999999999888889999999999988888889999999


Q ss_pred             HHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCC
Q 021960          187 HAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLR  266 (305)
Q Consensus       187 aa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (305)
                      ++++.+++.++.++.+.+++++.+.||++.|++.......                                .....+.+
T Consensus       159 ~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~~~~~--------------------------------~~~~~~~~  206 (239)
T PRK12828        159 AGVARLTEALAAELLDRGITVNAVLPSIIDTPPNRADMPD--------------------------------ADFSRWVT  206 (239)
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEecCcccCcchhhcCCc--------------------------------hhhhcCCC
Confidence            9999999999999988899999999999999863221110                                11234678


Q ss_pred             HHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          267 SKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       267 ~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      ++|+++.+++++++...+++|+.+.+|||..+
T Consensus       207 ~~dva~~~~~~l~~~~~~~~g~~~~~~g~~~~  238 (239)
T PRK12828        207 PEQIAAVIAFLLSDEAQAITGASIPVDGGVAL  238 (239)
T ss_pred             HHHHHHHHHHHhCcccccccceEEEecCCEeC
Confidence            99999999999998878899999999999754

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.2e-34  Score=251.11  Aligned_cols=243  Identities=31%  Similarity=0.476  Sum_probs=197.4

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhcC
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRYG  105 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g  105 (305)
                      ++.++++||||+++|||.++++.|+++|++|++++|+....+...+..  .+.++.++.+|++|.++++++++.+.+.++
T Consensus         2 ~~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (253)
T PRK08217          2 DLKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFG   81 (253)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            467999999999999999999999999999999999876554443332  245688899999999999999999988888


Q ss_pred             CccEEEEcCCCCCCCCC----CCcc-cCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC-CCCEEEEecccccccCCCCC
Q 021960          106 RLDILYNNAGVLGNQRK----HKSI-IDFDADEFDNVMRVNVKGMALGIKHAARVMINR-GGGCIISTASVAGVMGGLGP  179 (305)
Q Consensus       106 ~id~li~nag~~~~~~~----~~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~isS~~~~~~~~~~  179 (305)
                      ++|+||||||.......    ...+ .+.+.+++++.+++|+.+++++.+.+.+.|.++ ..+.|+++||.. ..+.++.
T Consensus        82 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~-~~~~~~~  160 (253)
T PRK08217         82 QLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIA-RAGNMGQ  160 (253)
T ss_pred             CCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEcccc-ccCCCCC
Confidence            99999999997542100    0112 567889999999999999999999999998765 457889988864 4577788


Q ss_pred             ccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCC
Q 021960          180 HAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGN  259 (305)
Q Consensus       180 ~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (305)
                      ..|+++|+++++++++++.++.++||++++++||+++|++.....                   ++..+.+.   .  ..
T Consensus       161 ~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~~~-------------------~~~~~~~~---~--~~  216 (253)
T PRK08217        161 TNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAAMK-------------------PEALERLE---K--MI  216 (253)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccC-------------------HHHHHHHH---h--cC
Confidence            999999999999999999999989999999999999999853211                   11111111   1  24


Q ss_pred             CCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCcc
Q 021960          260 LKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT  297 (305)
Q Consensus       260 ~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~  297 (305)
                      +.+++.+++|+++.+.||++.  .+++|++|.+|||+.
T Consensus       217 ~~~~~~~~~~~a~~~~~l~~~--~~~~g~~~~~~gg~~  252 (253)
T PRK08217        217 PVGRLGEPEEIAHTVRFIIEN--DYVTGRVLEIDGGLR  252 (253)
T ss_pred             CcCCCcCHHHHHHHHHHHHcC--CCcCCcEEEeCCCcc
Confidence            567788999999999999964  589999999999985

>PRK12827 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.1e-34  Score=249.63  Aligned_cols=240  Identities=33%  Similarity=0.491  Sum_probs=199.0

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCc----chhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHH
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVED----TLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTV  101 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~----~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~  101 (305)
                      +++++++|||||+|+||+++++.|+++|++|++++|..    ...+......  .+.++.++.+|++|.++++++++++.
T Consensus         3 ~~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   82 (249)
T PRK12827          3 SLDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGV   82 (249)
T ss_pred             CcCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH
Confidence            45789999999999999999999999999999876532    2222222222  23468899999999999999999999


Q ss_pred             HhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHH-HHHHcCCCCEEEEecccccccCCCCCc
Q 021960          102 SRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAA-RVMINRGGGCIISTASVAGVMGGLGPH  180 (305)
Q Consensus       102 ~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-~~~~~~~~~~iv~isS~~~~~~~~~~~  180 (305)
                      +.++++|+||||||....    .++.+.+.+++++.+++|+.+++.+++.+. +.+.+++.+++|++||..+..+.+++.
T Consensus        83 ~~~~~~d~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~  158 (249)
T PRK12827         83 EEFGRLDILVNNAGIATD----AAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGNRGQV  158 (249)
T ss_pred             HHhCCCCEEEECCCCCCC----CCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcCCCCCCc
Confidence            888899999999998654    456778899999999999999999999999 666666678999999999998888999


Q ss_pred             cchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCC
Q 021960          181 AYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNL  260 (305)
Q Consensus       181 ~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (305)
                      .|+.+|++++.++++++.++.+.|+++++|+||+++|++..+....                     ..   ...  ..+
T Consensus       159 ~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~---------------------~~---~~~--~~~  212 (249)
T PRK12827        159 NYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNAAPT---------------------EH---LLN--PVP  212 (249)
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccccchH---------------------HH---HHh--hCC
Confidence            9999999999999999999988899999999999999974322100                     01   111  134


Q ss_pred             CCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCcc
Q 021960          261 KGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT  297 (305)
Q Consensus       261 ~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~  297 (305)
                      .+...+++|+++.+++++++...+++|+++.+|||++
T Consensus       213 ~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~~g~~  249 (249)
T PRK12827        213 VQRLGEPDEVAALVAFLVSDAASYVTGQVIPVDGGFC  249 (249)
T ss_pred             CcCCcCHHHHHHHHHHHcCcccCCccCcEEEeCCCCC
Confidence            4566799999999999999888899999999999974

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=100.00  E-value=3.6e-34  Score=249.55  Aligned_cols=245  Identities=37%  Similarity=0.533  Sum_probs=205.6

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhcC
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRYG  105 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g  105 (305)
                      ++.+|++|||||+|+||++++++|+++|++|++++|+..........+  .+.++.++.+|++|.++++++++++.++++
T Consensus         3 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   82 (251)
T PRK12826          3 DLEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFG   82 (251)
T ss_pred             CCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            457899999999999999999999999999999999865444333322  234588999999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccc-cCCCCCccchh
Q 021960          106 RLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGV-MGGLGPHAYTA  184 (305)
Q Consensus       106 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~-~~~~~~~~Y~~  184 (305)
                      ++|+||||+|....    .++.+.+.+++++.++.|+.+++.+.+.+++.|.+++.++||++||..+. .+.++...|++
T Consensus        83 ~~d~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~~~~y~~  158 (251)
T PRK12826         83 RLDILVANAGIFPL----TPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRVGYPGLAHYAA  158 (251)
T ss_pred             CCCEEEECCCCCCC----CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhccCCCCccHHHH
Confidence            99999999997654    45667788999999999999999999999999988778899999999988 77888899999


Q ss_pred             hHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCC
Q 021960          185 SKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT  264 (305)
Q Consensus       185 sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (305)
                      +|++++++++.++.++.+.|++++.++||.++|++.......                  ...   ..+..  ..+.+++
T Consensus       159 sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~------------------~~~---~~~~~--~~~~~~~  215 (251)
T PRK12826        159 SKAGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNLGDA------------------QWA---EAIAA--AIPLGRL  215 (251)
T ss_pred             HHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCch------------------HHH---HHHHh--cCCCCCC
Confidence            999999999999999988899999999999999874332110                  000   11111  2455678


Q ss_pred             CCHHHHHHHHHHhccCCCCceeccEEEecCCcccc
Q 021960          265 LRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTS  299 (305)
Q Consensus       265 ~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~  299 (305)
                      .+++|+++.+++++++..++++|+++.+|||....
T Consensus       216 ~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g~~~~  250 (251)
T PRK12826        216 GEPEDIAAAVLFLASDEARYITGQTLPVDGGATLP  250 (251)
T ss_pred             cCHHHHHHHHHHHhCccccCcCCcEEEECCCccCC
Confidence            89999999999999988888999999999998653

>PRK07825 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-34  Score=255.12  Aligned_cols=216  Identities=34%  Similarity=0.461  Sum_probs=187.8

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRL  107 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~i  107 (305)
                      .++++++||||||||||++++++|+++|++|++++|+....+...+.+.  ++.++.+|++|.++++++++++.+.++++
T Consensus         2 ~~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   79 (273)
T PRK07825          2 DLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELG--LVVGGPLDVTDPASFAAFLDAVEADLGPI   79 (273)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc--cceEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            4678999999999999999999999999999999998766554443332  47789999999999999999999999999


Q ss_pred             cEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhHH
Q 021960          108 DILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKH  187 (305)
Q Consensus       108 d~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKa  187 (305)
                      |++|||||....    ..+.+.+.+++++.+++|+.+++.+++.+++.|.+++.++||++||.++..+.++...|+++|+
T Consensus        80 d~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKa  155 (273)
T PRK07825         80 DVLVNNAGVMPV----GPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIPVPGMATYCASKH  155 (273)
T ss_pred             CEEEECCCcCCC----CccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccCCCCCCcchHHHHH
Confidence            999999998643    5677789999999999999999999999999999988899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCCH
Q 021960          188 AIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRS  267 (305)
Q Consensus       188 a~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (305)
                      ++++|+++++.|+.+.||+++.|+||+++|++..... .                                .......++
T Consensus       156 a~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~~~~~-~--------------------------------~~~~~~~~~  202 (273)
T PRK07825        156 AVVGFTDAARLELRGTGVHVSVVLPSFVNTELIAGTG-G--------------------------------AKGFKNVEP  202 (273)
T ss_pred             HHHHHHHHHHHHhhccCcEEEEEeCCcCcchhhcccc-c--------------------------------ccCCCCCCH
Confidence            9999999999999999999999999999999853210 0                                011235688


Q ss_pred             HHHHHHHHHhccCCC
Q 021960          268 KDIAEAALYLASDES  282 (305)
Q Consensus       268 ~dva~~v~~l~s~~~  282 (305)
                      +|+|+.+++++++..
T Consensus       203 ~~va~~~~~~l~~~~  217 (273)
T PRK07825        203 EDVAAAIVGTVAKPR  217 (273)
T ss_pred             HHHHHHHHHHHhCCC
Confidence            999999998887653

>PRK07577 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.9e-34  Score=247.88  Aligned_cols=233  Identities=25%  Similarity=0.370  Sum_probs=193.9

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 021960           29 LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLD  108 (305)
Q Consensus        29 l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id  108 (305)
                      +.+|++|||||+++||++++++|+++|++|++++|+....      .   ...++.+|++|.++++++++++.+.+ ++|
T Consensus         1 ~~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~------~---~~~~~~~D~~~~~~~~~~~~~~~~~~-~~d   70 (234)
T PRK07577          1 MSSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD------F---PGELFACDLADIEQTAATLAQINEIH-PVD   70 (234)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc------c---CceEEEeeCCCHHHHHHHHHHHHHhC-CCc
Confidence            3578999999999999999999999999999999876531      1   12468899999999999999988876 589


Q ss_pred             EEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhHHH
Q 021960          109 ILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHA  188 (305)
Q Consensus       109 ~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKaa  188 (305)
                      +||||+|....    .++.+.+.+++++.+++|+.+++++.+.+++.|.+++.++||++||.. ..+.++...|+++|++
T Consensus        71 ~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~-~~~~~~~~~Y~~sK~a  145 (234)
T PRK07577         71 AIVNNVGIALP----QPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRA-IFGALDRTSYSAAKSA  145 (234)
T ss_pred             EEEECCCCCCC----CChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcccc-ccCCCCchHHHHHHHH
Confidence            99999997644    456677899999999999999999999999999888889999999985 4566788899999999


Q ss_pred             HHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCCHH
Q 021960          189 IVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSK  268 (305)
Q Consensus       189 ~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (305)
                      +++++++++.|+.++||++++|+||+++|++.....+..                .+...   ....  ..+.++..+|+
T Consensus       146 ~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~----------------~~~~~---~~~~--~~~~~~~~~~~  204 (234)
T PRK07577        146 LVGCTRTWALELAEYGITVNAVAPGPIETELFRQTRPVG----------------SEEEK---RVLA--SIPMRRLGTPE  204 (234)
T ss_pred             HHHHHHHHHHHHHhhCcEEEEEecCcccCcccccccccc----------------hhHHH---HHhh--cCCCCCCcCHH
Confidence            999999999999999999999999999999854321110                00000   1111  23556777999


Q ss_pred             HHHHHHHHhccCCCCceeccEEEecCCcc
Q 021960          269 DIAEAALYLASDESRYVSGHNLVVDGGVT  297 (305)
Q Consensus       269 dva~~v~~l~s~~~~~~tG~~i~idgG~~  297 (305)
                      |+|+.+.+|+++...+++|+++.+|||..
T Consensus       205 ~~a~~~~~l~~~~~~~~~g~~~~~~g~~~  233 (234)
T PRK07577        205 EVAAAIAFLLSDDAGFITGQVLGVDGGGS  233 (234)
T ss_pred             HHHHHHHHHhCcccCCccceEEEecCCcc
Confidence            99999999999888899999999999854

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=3.3e-34  Score=249.77  Aligned_cols=232  Identities=26%  Similarity=0.407  Sum_probs=198.3

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc---CCCCeEEEEecCC--CHHHHHHHHHHHH
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL---APAPVTFVHCDVS--LEEDIENLINSTV  101 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~---~~~~v~~~~~D~~--d~~~i~~~~~~~~  101 (305)
                      ..+.+|++|||||+++||.+++++|+++|++|++++|+....+.+.+.+   ...++.++.+|++  +.++++++++.+.
T Consensus         8 ~~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~   87 (247)
T PRK08945          8 DLLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIE   87 (247)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHH
Confidence            3568999999999999999999999999999999999876544443332   2345677788886  7899999999999


Q ss_pred             HhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCcc
Q 021960          102 SRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHA  181 (305)
Q Consensus       102 ~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~  181 (305)
                      +.++++|+||||||.....   .++.+.+.+.+++.+++|+.+++++++.+.+.|.+++.++||++||..+..+.+++..
T Consensus        88 ~~~~~id~vi~~Ag~~~~~---~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~  164 (247)
T PRK08945         88 EQFGRLDGVLHNAGLLGEL---GPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQGRANWGA  164 (247)
T ss_pred             HHhCCCCEEEECCcccCCC---CCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcCCCCCCcc
Confidence            9999999999999975442   4566778899999999999999999999999998888899999999999999899999


Q ss_pred             chhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCC
Q 021960          182 YTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLK  261 (305)
Q Consensus       182 Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (305)
                      |+++|++++.+++.++.++...+|++++++||+++|++....++.                                ...
T Consensus       165 Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~~~~~~--------------------------------~~~  212 (247)
T PRK08945        165 YAVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRASAFPG--------------------------------EDP  212 (247)
T ss_pred             cHHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchhhhcCc--------------------------------ccc
Confidence            999999999999999999999999999999999999874333221                                112


Q ss_pred             CCCCCHHHHHHHHHHhccCCCCceeccEEEec
Q 021960          262 GTTLRSKDIAEAALYLASDESRYVSGHNLVVD  293 (305)
Q Consensus       262 ~~~~~~~dva~~v~~l~s~~~~~~tG~~i~id  293 (305)
                      .++.+|+|+++.++|++++..++++|+++...
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  244 (247)
T PRK08945        213 QKLKTPEDIMPLYLYLMGDDSRRKNGQSFDAQ  244 (247)
T ss_pred             cCCCCHHHHHHHHHHHhCccccccCCeEEeCC
Confidence            45679999999999999999999999997654

>PRK12829 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.7e-34  Score=250.33  Aligned_cols=257  Identities=35%  Similarity=0.537  Sum_probs=208.5

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcC
Q 021960           26 HRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYG  105 (305)
Q Consensus        26 ~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g  105 (305)
                      ...++++++|||||+|+||++++++|+++|++|++++|+....+.+.+.....++.++.+|++|.++++++++++.+.++
T Consensus         6 ~~~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   85 (264)
T PRK12829          6 LKPLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFG   85 (264)
T ss_pred             hhccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            34578999999999999999999999999999999999876655554444333678899999999999999999999989


Q ss_pred             CccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCC-CEEEEecccccccCCCCCccchh
Q 021960          106 RLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGG-GCIISTASVAGVMGGLGPHAYTA  184 (305)
Q Consensus       106 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~iv~isS~~~~~~~~~~~~Y~~  184 (305)
                      ++|+||||+|.....   ..+.+.+.+++++.+++|+.+++++++.+.+.+...+. ++|+++||.++..+.+++..|+.
T Consensus        86 ~~d~vi~~ag~~~~~---~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~~~~~~~y~~  162 (264)
T PRK12829         86 GLDVLVNNAGIAGPT---GGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLGYPGRTPYAA  162 (264)
T ss_pred             CCCEEEECCCCCCCC---CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccccCCCCCchhHH
Confidence            999999999976332   45567788999999999999999999999998877665 78999999988888888899999


Q ss_pred             hHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCC
Q 021960          185 SKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT  264 (305)
Q Consensus       185 sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (305)
                      +|++++.+++.++.++...++++++++||+++|++.........        ...+.+......   .+..  ..+.+++
T Consensus       163 ~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~~~~~~~--------~~~~~~~~~~~~---~~~~--~~~~~~~  229 (264)
T PRK12829        163 SKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMRRVIEARA--------QQLGIGLDEMEQ---EYLE--KISLGRM  229 (264)
T ss_pred             HHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHHHHhhhhh--------hccCCChhHHHH---HHHh--cCCCCCC
Confidence            99999999999999998889999999999999998654322100        001111111111   1111  1355678


Q ss_pred             CCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          265 LRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       265 ~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      .+++|+++.+.+++++....++|+.|.+|||...
T Consensus       230 ~~~~d~a~~~~~l~~~~~~~~~g~~~~i~~g~~~  263 (264)
T PRK12829        230 VEPEDIAATALFLASPAARYITGQAISVDGNVEY  263 (264)
T ss_pred             CCHHHHHHHHHHHcCccccCccCcEEEeCCCccc
Confidence            9999999999999988777899999999999754

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=100.00  E-value=1.7e-34  Score=249.70  Aligned_cols=224  Identities=25%  Similarity=0.237  Sum_probs=183.0

Q ss_pred             CEEEEecCCCchHHHHHHHHHHcC--CeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 021960           32 KVAIITGGARGIGEAAVRLFARHG--AKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDI  109 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~g--~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~  109 (305)
                      ++++||||++|||++++++|+++|  +.|++..|+....      ....++.++.+|++|.++++++.    +.++++|+
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~------~~~~~~~~~~~Dls~~~~~~~~~----~~~~~id~   70 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD------FQHDNVQWHALDVTDEAEIKQLS----EQFTQLDW   70 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc------cccCceEEEEecCCCHHHHHHHH----HhcCCCCE
Confidence            479999999999999999999985  5565555544321      12346889999999999988754    44578999


Q ss_pred             EEEcCCCCCCCC--CCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEeccccccc---CCCCCccchh
Q 021960          110 LYNNAGVLGNQR--KHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVM---GGLGPHAYTA  184 (305)
Q Consensus       110 li~nag~~~~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~---~~~~~~~Y~~  184 (305)
                      ||||||......  ...++.+.+.+.+++.+++|+.+++.+++.++|.|.+++.++++++||..+..   +.+++..|++
T Consensus        71 li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~~~~~~~~~~~~~~Y~a  150 (235)
T PRK09009         71 LINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKVGSISDNRLGGWYSYRA  150 (235)
T ss_pred             EEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeecccccccCCCCCcchhhh
Confidence            999999875321  12456778999999999999999999999999999877778999999866533   3456789999


Q ss_pred             hHHHHHHHHHHHHHHHCc--CCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCC
Q 021960          185 SKHAIVGLTKNAACELGR--YGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKG  262 (305)
Q Consensus       185 sKaa~~~~~~~la~e~~~--~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (305)
                      +|+++++|+++|+.|+.+  ++|+|++|+||+++|+|..+...                                ..+.+
T Consensus       151 sK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~~~~--------------------------------~~~~~  198 (235)
T PRK09009        151 SKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKPFQQ--------------------------------NVPKG  198 (235)
T ss_pred             hHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcchhh--------------------------------ccccC
Confidence            999999999999999986  68999999999999998532100                                13446


Q ss_pred             CCCCHHHHHHHHHHhccCCCCceeccEEEecCCcc
Q 021960          263 TTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT  297 (305)
Q Consensus       263 ~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~  297 (305)
                      +..+|||+|+.+++++++..++++|+++.+|||+.
T Consensus       199 ~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~~g~~~  233 (235)
T PRK09009        199 KLFTPEYVAQCLLGIIANATPAQSGSFLAYDGETL  233 (235)
T ss_pred             CCCCHHHHHHHHHHHHHcCChhhCCcEEeeCCcCC
Confidence            67899999999999999998899999999999975

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=100.00  E-value=7.8e-34  Score=246.70  Aligned_cols=243  Identities=34%  Similarity=0.518  Sum_probs=202.4

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcch-hhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTL-GSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~-~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      .+++|++|||||+|+||+++++.|+++|++|+++.|+... ........  .+.++.++.+|++|.+++.++++++.+.+
T Consensus         2 ~~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   81 (248)
T PRK05557          2 SLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEF   81 (248)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            4678999999999999999999999999999877776442 22222222  24568899999999999999999999988


Q ss_pred             CCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchh
Q 021960          105 GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTA  184 (305)
Q Consensus       105 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~  184 (305)
                      +++|+||||||....    ....+.+.+.+++.+++|+.+++.+.+.+.+.+.+.+.+++|++||..+..+.++...|++
T Consensus        82 ~~id~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~~~~~~y~~  157 (248)
T PRK05557         82 GGVDILVNNAGITRD----NLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGNPGQANYAA  157 (248)
T ss_pred             CCCCEEEECCCcCCC----CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCCCCCchhHH
Confidence            899999999997644    4555678899999999999999999999999998877789999999988888888999999


Q ss_pred             hHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCC
Q 021960          185 SKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT  264 (305)
Q Consensus       185 sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (305)
                      +|++++.+++.++.++...+++++.++||+++|++.....                   ....+.   +..  ..+.+++
T Consensus       158 sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~~~-------------------~~~~~~---~~~--~~~~~~~  213 (248)
T PRK05557        158 SKAGVIGFTKSLARELASRGITVNAVAPGFIETDMTDALP-------------------EDVKEA---ILA--QIPLGRL  213 (248)
T ss_pred             HHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCccccccC-------------------hHHHHH---HHh--cCCCCCC
Confidence            9999999999999999888999999999999998743210                   011111   111  2345667


Q ss_pred             CCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          265 LRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       265 ~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      .+++|+++.+.+|+++...+++|+++.+|||+++
T Consensus       214 ~~~~~va~~~~~l~~~~~~~~~g~~~~i~~~~~~  247 (248)
T PRK05557        214 GQPEEIASAVAFLASDEAAYITGQTLHVNGGMVM  247 (248)
T ss_pred             cCHHHHHHHHHHHcCcccCCccccEEEecCCccC
Confidence            8999999999999998888999999999999875

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2e-34  Score=272.31  Aligned_cols=240  Identities=30%  Similarity=0.390  Sum_probs=199.7

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchh--hhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcC
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLG--SVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYG  105 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~--~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g  105 (305)
                      .++++++|||||++|||+++++.|+++|++|+++++.....  ..+...+   ...++.+|++|.++++++++.+.+.++
T Consensus       207 ~~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~---~~~~~~~Dv~~~~~~~~~~~~~~~~~g  283 (450)
T PRK08261        207 PLAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRV---GGTALALDITAPDAPARIAEHLAERHG  283 (450)
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHc---CCeEEEEeCCCHHHHHHHHHHHHHhCC
Confidence            56799999999999999999999999999999998853322  2222222   245788999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhh
Q 021960          106 RLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTAS  185 (305)
Q Consensus       106 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  185 (305)
                      ++|+||||||....    ..+.+.+.+.|+..+++|+.+++++.+.+.+.+..+..++||++||.++..+.+++..|+++
T Consensus       284 ~id~vi~~AG~~~~----~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~~~~~~Y~as  359 (450)
T PRK08261        284 GLDIVVHNAGITRD----KTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGNRGQTNYAAS  359 (450)
T ss_pred             CCCEEEECCCcCCC----CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCCChHHHHH
Confidence            99999999997643    56778899999999999999999999999997655667899999999999998999999999


Q ss_pred             HHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCC
Q 021960          186 KHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL  265 (305)
Q Consensus       186 Kaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (305)
                      |+++++|+++++.++.++||++++|+||+++|+|.... +.                   .......   . ..+..+..
T Consensus       360 Kaal~~~~~~la~el~~~gi~v~~v~PG~i~t~~~~~~-~~-------------------~~~~~~~---~-~~~l~~~~  415 (450)
T PRK08261        360 KAGVIGLVQALAPLLAERGITINAVAPGFIETQMTAAI-PF-------------------ATREAGR---R-MNSLQQGG  415 (450)
T ss_pred             HHHHHHHHHHHHHHHhhhCcEEEEEEeCcCcchhhhcc-ch-------------------hHHHHHh---h-cCCcCCCC
Confidence            99999999999999999999999999999999885321 00                   0001111   1 12345667


Q ss_pred             CHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          266 RSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       266 ~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      .|+|+++.+.||+++...++||++|.+|||..+
T Consensus       416 ~p~dva~~~~~l~s~~~~~itG~~i~v~g~~~~  448 (450)
T PRK08261        416 LPVDVAETIAWLASPASGGVTGNVVRVCGQSLL  448 (450)
T ss_pred             CHHHHHHHHHHHhChhhcCCCCCEEEECCCccc
Confidence            899999999999999999999999999998644

>PLN00015 protochlorophyllide reductase

Probab=100.00  E-value=2.4e-34  Score=258.91  Aligned_cols=237  Identities=21%  Similarity=0.190  Sum_probs=189.1

Q ss_pred             EEecCCCchHHHHHHHHHHcC-CeEEEEecCcchhhhHhhhcC--CCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEEE
Q 021960           35 IITGGARGIGEAAVRLFARHG-AKVVIADVEDTLGSVLASTLA--PAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILY  111 (305)
Q Consensus        35 lVtGas~giG~~ia~~l~~~g-~~vv~~~r~~~~~~~~~~~~~--~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~li  111 (305)
                      |||||++|||++++++|+++| ++|++++|+....+.....+.  +.++.++.+|++|.++++++++++.+.++++|+||
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lI   80 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLV   80 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence            699999999999999999999 999999998766554444332  34688899999999999999999998888999999


Q ss_pred             EcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC--CCEEEEecccccccC--------------
Q 021960          112 NNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRG--GGCIISTASVAGVMG--------------  175 (305)
Q Consensus       112 ~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~~~iv~isS~~~~~~--------------  175 (305)
                      ||||.....   .++.+.+.++|++.+++|+.+++++++.++|.|.+++  .++||++||..+..+              
T Consensus        81 nnAG~~~~~---~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~  157 (308)
T PLN00015         81 CNAAVYLPT---AKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGD  157 (308)
T ss_pred             ECCCcCCCC---CCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCccchhh
Confidence            999975321   2455778999999999999999999999999998775  689999999876421              


Q ss_pred             ---------------------CCCCccchhhHHHHHHHHHHHHHHHCc-CCcEEEEEeCCcc-ccccchhcccCCCCCch
Q 021960          176 ---------------------GLGPHAYTASKHAIVGLTKNAACELGR-YGIRVNCISPFGV-ATSMLVNAWRNSGDGEE  232 (305)
Q Consensus       176 ---------------------~~~~~~Y~~sKaa~~~~~~~la~e~~~-~~i~v~~v~PG~v-~T~~~~~~~~~~~~~~~  232 (305)
                                           ..++.+|++||+|...+++.+++++.+ .||+|++|+||+| +|+|.....+.      
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~~~------  231 (308)
T PLN00015        158 LRGLAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFREHIPL------  231 (308)
T ss_pred             hhhhhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCccccccccHH------
Confidence                                 123567999999988899999999975 6999999999999 78885431100      


Q ss_pred             hhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCc
Q 021960          233 EDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGV  296 (305)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~  296 (305)
                                    .........  ..+.+++.+||+.|+.+++++++.....+|+.+..||+.
T Consensus       232 --------------~~~~~~~~~--~~~~~~~~~pe~~a~~~~~l~~~~~~~~~G~~~~~~g~~  279 (308)
T PLN00015        232 --------------FRLLFPPFQ--KYITKGYVSEEEAGKRLAQVVSDPSLTKSGVYWSWNGGS  279 (308)
T ss_pred             --------------HHHHHHHHH--HHHhcccccHHHhhhhhhhhccccccCCCccccccCCcc
Confidence                          000000000  122356789999999999999988778999999988863

>PRK07832 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.9e-34  Score=251.04  Aligned_cols=246  Identities=22%  Similarity=0.280  Sum_probs=198.9

Q ss_pred             CEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc---CCCCeEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 021960           32 KVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL---APAPVTFVHCDVSLEEDIENLINSTVSRYGRLD  108 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~---~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id  108 (305)
                      |+++||||++|||+++++.|+++|++|++++|+....+...+.+   ....+.++.+|++|.++++++++++.+.++++|
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMD   80 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence            57999999999999999999999999999998876544443322   223356688999999999999999999999999


Q ss_pred             EEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC-CCCEEEEecccccccCCCCCccchhhHH
Q 021960          109 ILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINR-GGGCIISTASVAGVMGGLGPHAYTASKH  187 (305)
Q Consensus       109 ~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~isS~~~~~~~~~~~~Y~~sKa  187 (305)
                      +||||+|....    .++.+.+.+++++.+++|+.+++++++.+++.|.++ ..++||++||..+..+.++...|+++|+
T Consensus        81 ~lv~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~  156 (272)
T PRK07832         81 VVMNIAGISAW----GTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVALPWHAAYSASKF  156 (272)
T ss_pred             EEEECCCCCCC----CccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCCCCCCcchHHHHH
Confidence            99999997543    466788999999999999999999999999999764 3589999999999888889999999999


Q ss_pred             HHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCCH
Q 021960          188 AIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRS  267 (305)
Q Consensus       188 a~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (305)
                      ++++|+++++.|+.+++|+|+.|+||+++|++..+......+.            .+.......   .   ...++..+|
T Consensus       157 a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~------------~~~~~~~~~---~---~~~~~~~~~  218 (272)
T PRK07832        157 GLRGLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIAGVDR------------EDPRVQKWV---D---RFRGHAVTP  218 (272)
T ss_pred             HHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhcccccccCc------------chhhHHHHH---H---hcccCCCCH
Confidence            9999999999999999999999999999999865431110000            001111111   1   123566899


Q ss_pred             HHHHHHHHHhccCCCCceeccEEEecCCccccc
Q 021960          268 KDIAEAALYLASDESRYVSGHNLVVDGGVTTSR  300 (305)
Q Consensus       268 ~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~~  300 (305)
                      +|+|+.++++++. .++++++.+.+++|+.+.+
T Consensus       219 ~~vA~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  250 (272)
T PRK07832        219 EKAAEKILAGVEK-NRYLVYTSPDIRALYWFKR  250 (272)
T ss_pred             HHHHHHHHHHHhc-CCeEEecCcchHHHHHHHh
Confidence            9999999999964 5789999999999976554

>PRK08263 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-33  Score=249.65  Aligned_cols=244  Identities=23%  Similarity=0.242  Sum_probs=195.9

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDI  109 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~  109 (305)
                      ++|++|||||+||||+++++.|+++|++|++++|+....+.+.+.. +.++.++.+|++|.++++++++++.+.++++|+
T Consensus         2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   80 (275)
T PRK08263          2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKY-GDRLLPLALDVTDRAAVFAAVETAVEHFGRLDI   80 (275)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc-cCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            5789999999999999999999999999999999876655444333 345888999999999999999999999999999


Q ss_pred             EEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhHHHH
Q 021960          110 LYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAI  189 (305)
Q Consensus       110 li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKaa~  189 (305)
                      +|||||....    .++.+.+.+++++.+++|+.+++++++.+++.|.+++.++||++||.++..+.++...|+++|+++
T Consensus        81 vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sKaa~  156 (275)
T PRK08263         81 VVNNAGYGLF----GMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISAFPMSGIYHASKWAL  156 (275)
T ss_pred             EEECCCCccc----cccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCCCCCccHHHHHHHHH
Confidence            9999998643    567788999999999999999999999999999888888999999999999999999999999999


Q ss_pred             HHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCC-CCHH
Q 021960          190 VGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT-LRSK  268 (305)
Q Consensus       190 ~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  268 (305)
                      +++++.++.|+.++|++|+.|+||+++|++.............          .++..+.+...     .+.+.+ ++|+
T Consensus       157 ~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~----------~~~~~~~~~~~-----~~~~~~~~~p~  221 (275)
T PRK08263        157 EGMSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDA----------YDTLREELAEQ-----WSERSVDGDPE  221 (275)
T ss_pred             HHHHHHHHHHhhhhCcEEEEEecCCccCCccccccccCCCchh----------hhhHHHHHHHH-----HHhccCCCCHH
Confidence            9999999999999999999999999999986422111000000          00111111111     233456 8999


Q ss_pred             HHHHHHHHhccCCCCceeccEEEecCC
Q 021960          269 DIAEAALYLASDESRYVSGHNLVVDGG  295 (305)
Q Consensus       269 dva~~v~~l~s~~~~~~tG~~i~idgG  295 (305)
                      |+++.++++++...  ..++++...++
T Consensus       222 dva~~~~~l~~~~~--~~~~~~~~~~~  246 (275)
T PRK08263        222 AAAEALLKLVDAEN--PPLRLFLGSGV  246 (275)
T ss_pred             HHHHHHHHHHcCCC--CCeEEEeCchH
Confidence            99999999998652  34555554443

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=100.00  E-value=2e-33  Score=244.42  Aligned_cols=239  Identities=29%  Similarity=0.424  Sum_probs=193.8

Q ss_pred             CEEEEecCCCchHHHHHHHHHHcCCeEEEE-ecCcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 021960           32 KVAIITGGARGIGEAAVRLFARHGAKVVIA-DVEDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRYGRLD  108 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~g~~vv~~-~r~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id  108 (305)
                      |++|||||+|+||++++++|+++|++|+++ .|+..........+  .+.++..+.+|++|.++++++++++.+.++++|
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~id   81 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPLA   81 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCCC
Confidence            689999999999999999999999998764 55544333322222  234588899999999999999999999999999


Q ss_pred             EEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC---CCEEEEecccccccCCCC-Cccchh
Q 021960          109 ILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRG---GGCIISTASVAGVMGGLG-PHAYTA  184 (305)
Q Consensus       109 ~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~---~~~iv~isS~~~~~~~~~-~~~Y~~  184 (305)
                      +||||+|.....   .++.+.+.++++..+++|+.+++.+++.+++.+.++.   +++||++||..+..+.++ +..|++
T Consensus        82 ~vi~~ag~~~~~---~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~~~~~~~Y~~  158 (247)
T PRK09730         82 ALVNNAGILFTQ---CTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAPGEYVDYAA  158 (247)
T ss_pred             EEEECCCCCCCC---CccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCCCCcccchHh
Confidence            999999975332   4566788999999999999999999999999987653   578999999988888776 468999


Q ss_pred             hHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCC
Q 021960          185 SKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT  264 (305)
Q Consensus       185 sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (305)
                      +|++++.+++.++.++.++|+++++++||.++|++.....                  ........   ..  ..+.++.
T Consensus       159 sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~~------------------~~~~~~~~---~~--~~~~~~~  215 (247)
T PRK09730        159 SKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGG------------------EPGRVDRV---KS--NIPMQRG  215 (247)
T ss_pred             HHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccCC------------------CHHHHHHH---Hh--cCCCCCC
Confidence            9999999999999999999999999999999999743210                  00111111   11  2345566


Q ss_pred             CCHHHHHHHHHHhccCCCCceeccEEEecCCc
Q 021960          265 LRSKDIAEAALYLASDESRYVSGHNLVVDGGV  296 (305)
Q Consensus       265 ~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~  296 (305)
                      .+++|+|+.++|++++...+++|+++.+|||.
T Consensus       216 ~~~~dva~~~~~~~~~~~~~~~g~~~~~~g~~  247 (247)
T PRK09730        216 GQPEEVAQAIVWLLSDKASYVTGSFIDLAGGK  247 (247)
T ss_pred             cCHHHHHHHHHhhcChhhcCccCcEEecCCCC
Confidence            79999999999999988889999999999973

>PRK06180 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.6e-33  Score=247.52  Aligned_cols=236  Identities=21%  Similarity=0.232  Sum_probs=190.1

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDI  109 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~  109 (305)
                      .+|++|||||+||||++++++|+++|++|++++|+....+.+... .+.++.++.+|++|.+++.++++.+.+.++++|+
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~-~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~   81 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEAL-HPDRALARLLDVTDFDAIDAVVADAEATFGPIDV   81 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhh-cCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            468999999999999999999999999999999987665544332 2346888999999999999999999999999999


Q ss_pred             EEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhHHHH
Q 021960          110 LYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAI  189 (305)
Q Consensus       110 li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKaa~  189 (305)
                      ||||||....    .++.+.+.+++++.+++|+.+++++++.+++.|.+++.++||++||.++..+.+++..|+++|+++
T Consensus        82 vv~~ag~~~~----~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~~~~~~~Y~~sK~a~  157 (277)
T PRK06180         82 LVNNAGYGHE----GAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLITMPGIGYYCGSKFAL  157 (277)
T ss_pred             EEECCCccCC----cccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCCCCCcchhHHHHHHH
Confidence            9999997543    466778899999999999999999999999999888888999999999999999999999999999


Q ss_pred             HHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCCHHH
Q 021960          190 VGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSKD  269 (305)
Q Consensus       190 ~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  269 (305)
                      ++++++++.|++.+|+++++|+||+++|++....+........     .    .............  ..+..++.+|+|
T Consensus       158 ~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~-----~----~~~~~~~~~~~~~--~~~~~~~~~~~d  226 (277)
T PRK06180        158 EGISESLAKEVAPFGIHVTAVEPGSFRTDWAGRSMVRTPRSIA-----D----YDALFGPIRQARE--AKSGKQPGDPAK  226 (277)
T ss_pred             HHHHHHHHHHhhhhCcEEEEEecCCcccCccccccccCCCCcH-----h----HHHHHHHHHHHHH--hhccCCCCCHHH
Confidence            9999999999998999999999999999975432221100000     0    0011111111111  123355679999


Q ss_pred             HHHHHHHhccCC
Q 021960          270 IAEAALYLASDE  281 (305)
Q Consensus       270 va~~v~~l~s~~  281 (305)
                      +|+.++++++.+
T Consensus       227 va~~~~~~l~~~  238 (277)
T PRK06180        227 AAQAILAAVESD  238 (277)
T ss_pred             HHHHHHHHHcCC
Confidence            999999998765

>PRK08324 short chain dehydrogenase; Validated

Probab=100.00  E-value=2.1e-33  Score=277.01  Aligned_cols=257  Identities=32%  Similarity=0.479  Sum_probs=213.8

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCC-CCeEEEEecCCCHHHHHHHHHHHHHhcC
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAP-APVTFVHCDVSLEEDIENLINSTVSRYG  105 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~i~~~~~~~~~~~g  105 (305)
                      ..+.||++|||||+||||+++++.|+++|++|++++|+....+...+.+.. .++.++.+|++|.++++++++++.+.+|
T Consensus       418 ~~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g  497 (681)
T PRK08324        418 KPLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFG  497 (681)
T ss_pred             cCCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            356899999999999999999999999999999999987765554443322 3688999999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCC-CEEEEecccccccCCCCCccchh
Q 021960          106 RLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGG-GCIISTASVAGVMGGLGPHAYTA  184 (305)
Q Consensus       106 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~iv~isS~~~~~~~~~~~~Y~~  184 (305)
                      ++|+||||||....    .++.+.+.++|++.+++|+.+++.+++.+.+.|.+++. ++||++||..+..+.++...|++
T Consensus       498 ~iDvvI~~AG~~~~----~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~~~~~~Y~a  573 (681)
T PRK08324        498 GVDIVVSNAGIAIS----GPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPGPNFGAYGA  573 (681)
T ss_pred             CCCEEEECCCCCCC----CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCCCCcHHHHH
Confidence            99999999998644    56778899999999999999999999999999987764 89999999999999899999999


Q ss_pred             hHHHHHHHHHHHHHHHCcCCcEEEEEeCCcc--ccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCC
Q 021960          185 SKHAIVGLTKNAACELGRYGIRVNCISPFGV--ATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKG  262 (305)
Q Consensus       185 sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v--~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (305)
                      +|+++++++++++.++++.||+++.|+||.+  .|++....+..       .....++++.++..    .++.. ..+.+
T Consensus       574 sKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~~~~~-------~~~~~~g~~~~~~~----~~~~~-~~~l~  641 (681)
T PRK08324        574 AKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWTGEWIE-------ARAAAYGLSEEELE----EFYRA-RNLLK  641 (681)
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCccccchhhh-------hhhhhccCChHHHH----HHHHh-cCCcC
Confidence            9999999999999999999999999999999  88875433211       11122333322211    11222 35677


Q ss_pred             CCCCHHHHHHHHHHhccCCCCceeccEEEecCCcccc
Q 021960          263 TTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTS  299 (305)
Q Consensus       263 ~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~  299 (305)
                      +.+.++|+|+++++++++....++|+++++|||....
T Consensus       642 ~~v~~~DvA~a~~~l~s~~~~~~tG~~i~vdgG~~~~  678 (681)
T PRK08324        642 REVTPEDVAEAVVFLASGLLSKTTGAIITVDGGNAAA  678 (681)
T ss_pred             CccCHHHHHHHHHHHhCccccCCcCCEEEECCCchhc
Confidence            8899999999999999877788999999999998654

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=100.00  E-value=3.9e-33  Score=242.01  Aligned_cols=242  Identities=36%  Similarity=0.525  Sum_probs=204.0

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhcC
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRYG  105 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g  105 (305)
                      .|.++++|||||+|+||+++++.|+++|++|++++|+....+.....+  .+.++.++.+|++|.+++.++++++.+.++
T Consensus         2 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (246)
T PRK05653          2 SLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFG   81 (246)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            456789999999999999999999999999999999876554433332  245688999999999999999999988889


Q ss_pred             CccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhh
Q 021960          106 RLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTAS  185 (305)
Q Consensus       106 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  185 (305)
                      ++|++||++|....    .+..+.+.+++++.++.|+.+++++++.+.+.+.+.+.++||++||..+..+.++...|+.+
T Consensus        82 ~id~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~~~~~~~~y~~s  157 (246)
T PRK05653         82 ALDILVNNAGITRD----ALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVTGNPGQTNYSAA  157 (246)
T ss_pred             CCCEEEECCCcCCC----CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccCCCCCcHhHhH
Confidence            99999999997644    45566788999999999999999999999999987777899999999888888888999999


Q ss_pred             HHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCC
Q 021960          186 KHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL  265 (305)
Q Consensus       186 Kaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (305)
                      |++++.++++++.++.+.|+++++|+||.+.+++.....                    ...  ......  ..+.+.++
T Consensus       158 k~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~~~--------------------~~~--~~~~~~--~~~~~~~~  213 (246)
T PRK05653        158 KAGVIGFTKALALELASRGITVNAVAPGFIDTDMTEGLP--------------------EEV--KAEILK--EIPLGRLG  213 (246)
T ss_pred             HHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhhhh--------------------HHH--HHHHHh--cCCCCCCc
Confidence            999999999999999888999999999999998743210                    000  011111  23456788


Q ss_pred             CHHHHHHHHHHhccCCCCceeccEEEecCCcc
Q 021960          266 RSKDIAEAALYLASDESRYVSGHNLVVDGGVT  297 (305)
Q Consensus       266 ~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~  297 (305)
                      +++|+++.+.+++++....++|+++.+|||..
T Consensus       214 ~~~dva~~~~~~~~~~~~~~~g~~~~~~gg~~  245 (246)
T PRK05653        214 QPEEVANAVAFLASDAASYITGQVIPVNGGMY  245 (246)
T ss_pred             CHHHHHHHHHHHcCchhcCccCCEEEeCCCee
Confidence            99999999999999888889999999999975

>PRK06924 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.4e-34  Score=247.36  Aligned_cols=240  Identities=22%  Similarity=0.258  Sum_probs=192.4

Q ss_pred             CEEEEecCCCchHHHHHHHHHHcCCeEEEEecCc-chhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCC--cc
Q 021960           32 KVAIITGGARGIGEAAVRLFARHGAKVVIADVED-TLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGR--LD  108 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~-~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~--id  108 (305)
                      |++|||||+||||++++++|+++|++|++++|+. +..+.+.+. .+.++.++.+|++|.++++++++++.+.++.  ++
T Consensus         2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~   80 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAEQ-YNSNLTFHSLDLQDVHELETNFNEILSSIQEDNVS   80 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHhc-cCCceEEEEecCCCHHHHHHHHHHHHHhcCcccCC
Confidence            6899999999999999999999999999999876 333322222 2346889999999999999999998877653  22


Q ss_pred             --EEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC-CCCEEEEecccccccCCCCCccchhh
Q 021960          109 --ILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINR-GGGCIISTASVAGVMGGLGPHAYTAS  185 (305)
Q Consensus       109 --~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~isS~~~~~~~~~~~~Y~~s  185 (305)
                        ++|||||.....   .++.+.+.+++.+.+++|+.+++.+++.+++.|.+. ..++||++||..+..+.+++..|+++
T Consensus        81 ~~~~v~~ag~~~~~---~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~s  157 (251)
T PRK06924         81 SIHLINNAGMVAPI---KPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKNPYFGWSAYCSS  157 (251)
T ss_pred             ceEEEEcceecccC---cccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcCCCCCcHHHhHH
Confidence              899999975432   457788999999999999999999999999999774 45799999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHC--cCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCC
Q 021960          186 KHAIVGLTKNAACELG--RYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGT  263 (305)
Q Consensus       186 Kaa~~~~~~~la~e~~--~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (305)
                      |++++++++.++.|++  +.+|+|++|+||+++|++........  .+.           ....+.+.   ..  .+.++
T Consensus       158 Kaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~--~~~-----------~~~~~~~~---~~--~~~~~  219 (251)
T PRK06924        158 KAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIRSSS--KED-----------FTNLDRFI---TL--KEEGK  219 (251)
T ss_pred             HHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHHHHhcC--ccc-----------chHHHHHH---HH--hhcCC
Confidence            9999999999999975  56899999999999999854322110  000           00111111   11  24577


Q ss_pred             CCCHHHHHHHHHHhccCCCCceeccEEEecC
Q 021960          264 TLRSKDIAEAALYLASDESRYVSGHNLVVDG  294 (305)
Q Consensus       264 ~~~~~dva~~v~~l~s~~~~~~tG~~i~idg  294 (305)
                      +.+|+|+|+.+++|+++. .+++|+++.+|+
T Consensus       220 ~~~~~dva~~~~~l~~~~-~~~~G~~~~v~~  249 (251)
T PRK06924        220 LLSPEYVAKALRNLLETE-DFPNGEVIDIDE  249 (251)
T ss_pred             cCCHHHHHHHHHHHHhcc-cCCCCCEeehhh
Confidence            899999999999999985 789999999986

>PRK05866 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.2e-33  Score=249.73  Aligned_cols=192  Identities=30%  Similarity=0.375  Sum_probs=166.8

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHh
Q 021960           26 HRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSR  103 (305)
Q Consensus        26 ~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~  103 (305)
                      ...+++|++|||||+||||+++|+.|+++|++|++++|+.+..+.+.+.+  .+.++.++.+|++|.++++++++++.+.
T Consensus        35 ~~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~  114 (293)
T PRK05866         35 PVDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKR  114 (293)
T ss_pred             CcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            35778999999999999999999999999999999999876655544333  2345789999999999999999999999


Q ss_pred             cCCccEEEEcCCCCCCCCCCCcccC--CCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEeccccccc-CCCCCc
Q 021960          104 YGRLDILYNNAGVLGNQRKHKSIID--FDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVM-GGLGPH  180 (305)
Q Consensus       104 ~g~id~li~nag~~~~~~~~~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~-~~~~~~  180 (305)
                      ++++|++|||||....    .++.+  .++++++..+++|+.+++++++.+++.|.+++.++||++||.++.. +.++..
T Consensus       115 ~g~id~li~~AG~~~~----~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~p~~~  190 (293)
T PRK05866        115 IGGVDILINNAGRSIR----RPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSEASPLFS  190 (293)
T ss_pred             cCCCCEEEECCCCCCC----cchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCCCcc
Confidence            9999999999997643    23333  2468899999999999999999999999888889999999976654 367788


Q ss_pred             cchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccch
Q 021960          181 AYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLV  221 (305)
Q Consensus       181 ~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~  221 (305)
                      .|+++|+++++|+++++.|+.++||+|++|+||+++|++..
T Consensus       191 ~Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~  231 (293)
T PRK05866        191 VYNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIA  231 (293)
T ss_pred             hHHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCcccc
Confidence            99999999999999999999999999999999999999853

>PRK07454 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.8e-33  Score=243.00  Aligned_cols=231  Identities=26%  Similarity=0.272  Sum_probs=192.3

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRYGRL  107 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~i  107 (305)
                      ++|+++||||+|+||++++++|+++|++|++++|+......+.+..  .+.++.++.+|++|.+++.++++.+.+.++++
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   84 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGCP   84 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            4689999999999999999999999999999999876554443332  23468899999999999999999999999999


Q ss_pred             cEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhHH
Q 021960          108 DILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKH  187 (305)
Q Consensus       108 d~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKa  187 (305)
                      |+||||||....    .++.+.+.+++++.+++|+.+++++++.+++.|.+++.++||++||..+..+.+++..|+++|+
T Consensus        85 d~lv~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  160 (241)
T PRK07454         85 DVLINNAGMAYT----GPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARNAFPQWGAYCVSKA  160 (241)
T ss_pred             CEEEECCCccCC----CchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCcCCCCccHHHHHHH
Confidence            999999997643    4567788999999999999999999999999998887899999999999888889999999999


Q ss_pred             HHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCCH
Q 021960          188 AIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRS  267 (305)
Q Consensus       188 a~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (305)
                      +++.++++++.++.+.|+++++|+||+++|++..+....                 .             .....+..++
T Consensus       161 ~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~~~~~-----------------~-------------~~~~~~~~~~  210 (241)
T PRK07454        161 ALAAFTKCLAEEERSHGIRVCTITLGAVNTPLWDTETVQ-----------------A-------------DFDRSAMLSP  210 (241)
T ss_pred             HHHHHHHHHHHHhhhhCCEEEEEecCcccCCcccccccc-----------------c-------------ccccccCCCH
Confidence            999999999999999999999999999999984321000                 0             0112345789


Q ss_pred             HHHHHHHHHhccCCCCceeccE-EEecC
Q 021960          268 KDIAEAALYLASDESRYVSGHN-LVVDG  294 (305)
Q Consensus       268 ~dva~~v~~l~s~~~~~~tG~~-i~idg  294 (305)
                      +|+|+.+++++++....+.+++ +.-++
T Consensus       211 ~~va~~~~~l~~~~~~~~~~~~~~~~~~  238 (241)
T PRK07454        211 EQVAQTILHLAQLPPSAVIEDLTLMPSA  238 (241)
T ss_pred             HHHHHHHHHHHcCCccceeeeEEeecCC
Confidence            9999999999997765544443 43333

>PRK05993 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.4e-33  Score=247.71  Aligned_cols=185  Identities=26%  Similarity=0.325  Sum_probs=166.7

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhc-CCcc
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRY-GRLD  108 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~-g~id  108 (305)
                      .+|++|||||+||||+++++.|+++|++|++++|+....+.+..    ..+.++.+|++|.++++++++++.+.+ +++|
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~----~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id   78 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEA----EGLEAFQLDYAEPESIAALVAQVLELSGGRLD   78 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----CCceEEEccCCCHHHHHHHHHHHHHHcCCCcc
Confidence            36899999999999999999999999999999998765554432    247789999999999999999987765 6899


Q ss_pred             EEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhHHH
Q 021960          109 ILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHA  188 (305)
Q Consensus       109 ~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKaa  188 (305)
                      +||||||....    ..+.+.+.+++++.+++|+.+++.+++.+++.|.+++.++||++||..+..+.++...|+++|++
T Consensus        79 ~li~~Ag~~~~----~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a  154 (277)
T PRK05993         79 ALFNNGAYGQP----GAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLVPMKYRGAYNASKFA  154 (277)
T ss_pred             EEEECCCcCCC----CCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcCCCCccchHHHHHHH
Confidence            99999997643    56777899999999999999999999999999988888999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCcCCcEEEEEeCCccccccchh
Q 021960          189 IVGLTKNAACELGRYGIRVNCISPFGVATSMLVN  222 (305)
Q Consensus       189 ~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~  222 (305)
                      +++|+++++.|+.++||+|++|+||+++|++...
T Consensus       155 ~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~~~~~  188 (277)
T PRK05993        155 IEGLSLTLRMELQGSGIHVSLIEPGPIETRFRAN  188 (277)
T ss_pred             HHHHHHHHHHHhhhhCCEEEEEecCCccCchhhH
Confidence            9999999999999999999999999999998654

>PRK07024 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.3e-33  Score=245.00  Aligned_cols=216  Identities=27%  Similarity=0.282  Sum_probs=182.1

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCC-CCeEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 021960           31 GKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAP-APVTFVHCDVSLEEDIENLINSTVSRYGRLDI  109 (305)
Q Consensus        31 ~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~  109 (305)
                      ++++|||||++|||+++++.|+++|++|++++|+....+...+.+.. .++.++.+|++|.+++.++++++.++++.+|+
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~   81 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPDV   81 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence            47899999999999999999999999999999987665554443322 26889999999999999999999999999999


Q ss_pred             EEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhHHHH
Q 021960          110 LYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAI  189 (305)
Q Consensus       110 li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKaa~  189 (305)
                      ||||||.....   ....+.+.+++++.+++|+.+++++++.+++.|.+++.++||++||..+..+.++...|+++|+++
T Consensus        82 lv~~ag~~~~~---~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asK~a~  158 (257)
T PRK07024         82 VIANAGISVGT---LTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVRGLPGAGAYSASKAAA  158 (257)
T ss_pred             EEECCCcCCCc---cccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCCCcchHHHHHHH
Confidence            99999975321   122336889999999999999999999999999888889999999999999999999999999999


Q ss_pred             HHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCCHHH
Q 021960          190 VGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSKD  269 (305)
Q Consensus       190 ~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  269 (305)
                      +.++++++.|+.++||++++|+||+++|++....-                                  .......+|++
T Consensus       159 ~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~----------------------------------~~~~~~~~~~~  204 (257)
T PRK07024        159 IKYLESLRVELRPAGVRVVTIAPGYIRTPMTAHNP----------------------------------YPMPFLMDADR  204 (257)
T ss_pred             HHHHHHHHHHhhccCcEEEEEecCCCcCchhhcCC----------------------------------CCCCCccCHHH
Confidence            99999999999999999999999999999743210                                  01112357888


Q ss_pred             HHHHHHHhccCCCC
Q 021960          270 IAEAALYLASDESR  283 (305)
Q Consensus       270 va~~v~~l~s~~~~  283 (305)
                      +++.++..+.+...
T Consensus       205 ~a~~~~~~l~~~~~  218 (257)
T PRK07024        205 FAARAARAIARGRR  218 (257)
T ss_pred             HHHHHHHHHhCCCc
Confidence            88888888876543

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=100.00  E-value=6.7e-33  Score=242.21  Aligned_cols=252  Identities=33%  Similarity=0.510  Sum_probs=204.9

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 021960           31 GKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRYGRLD  108 (305)
Q Consensus        31 ~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id  108 (305)
                      +|++|||||+|+||+++++.|+++|++|++++|+....+.+...+  .+.++.++.+|++|.++++.+++++.+.++++|
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   80 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLD   80 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence            478999999999999999999999999999999876655544433  235688999999999999999999998888999


Q ss_pred             EEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhHHH
Q 021960          109 ILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHA  188 (305)
Q Consensus       109 ~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKaa  188 (305)
                      +||||+|....    ....+.+.+++++.++.|+.+++.+++.+++.|.+.+.+++|++||..+..+.++...|+.+|++
T Consensus        81 ~vi~~a~~~~~----~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~~~~~y~~sk~a  156 (255)
T TIGR01963        81 ILVNNAGIQHV----APIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVASPFKSAYVAAKHG  156 (255)
T ss_pred             EEEECCCCCCC----CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCCCCCCchhHHHHHH
Confidence            99999997643    34556788999999999999999999999999988878899999999988888889999999999


Q ss_pred             HHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCCHH
Q 021960          189 IVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSK  268 (305)
Q Consensus       189 ~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (305)
                      ++.+++.++.++...+++++.++||.+.|++.........        ...+.+.......   .... ..+.+.+++++
T Consensus       157 ~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~--------~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~  224 (255)
T TIGR01963       157 LIGLTKVLALEVAAHGITVNAICPGYVRTPLVEKQIADQA--------KTRGIPEEQVIRE---VMLP-GQPTKRFVTVD  224 (255)
T ss_pred             HHHHHHHHHHHhhhcCeEEEEEecCccccHHHHHHHHhhh--------cccCCCchHHHHH---HHHc-cCccccCcCHH
Confidence            9999999999998889999999999999997543322100        0011111111111   1111 23456688999


Q ss_pred             HHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          269 DIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       269 dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      |+|+.+++++++..+.++|+.|++|||+++
T Consensus       225 d~a~~~~~~~~~~~~~~~g~~~~~~~g~~~  254 (255)
T TIGR01963       225 EVAETALFLASDAAAGITGQAIVLDGGWTA  254 (255)
T ss_pred             HHHHHHHHHcCccccCccceEEEEcCcccc
Confidence            999999999988767789999999999864

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK06196 oxidoreductase; Provisional

Probab=100.00  E-value=1.5e-33  Score=254.47  Aligned_cols=241  Identities=22%  Similarity=0.213  Sum_probs=186.3

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCC
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGR  106 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~  106 (305)
                      .++++|++|||||++|||++++++|+++|++|++++|+....+...+.+.  ++.++.+|++|.++++++++++.+.+++
T Consensus        22 ~~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~--~v~~~~~Dl~d~~~v~~~~~~~~~~~~~   99 (315)
T PRK06196         22 HDLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGID--GVEVVMLDLADLESVRAFAERFLDSGRR   99 (315)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh--hCeEEEccCCCHHHHHHHHHHHHhcCCC
Confidence            35688999999999999999999999999999999998765554433332  3788999999999999999999998899


Q ss_pred             ccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEeccccccc------------
Q 021960          107 LDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVM------------  174 (305)
Q Consensus       107 id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~------------  174 (305)
                      +|+||||||....      ..+.+.+.|+..+++|+.+++++++.+++.|.+++.++||++||.....            
T Consensus       100 iD~li~nAg~~~~------~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~  173 (315)
T PRK06196        100 IDILINNAGVMAC------PETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSPIRWDDPHFTR  173 (315)
T ss_pred             CCEEEECCCCCCC------CCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCCCCccccCccC
Confidence            9999999997532      2245668899999999999999999999999887778999999976532            


Q ss_pred             CCCCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHH
Q 021960          175 GGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFV  254 (305)
Q Consensus       175 ~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (305)
                      +.++...|+.||++++.+++.++.++.++||++++|+||+++|++.......                  ....  ..+.
T Consensus       174 ~~~~~~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~~~~~------------------~~~~--~~~~  233 (315)
T PRK06196        174 GYDKWLAYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHLPRE------------------EQVA--LGWV  233 (315)
T ss_pred             CCChHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccccCChh------------------hhhh--hhhh
Confidence            2334568999999999999999999999999999999999999985322100                  0000  0000


Q ss_pred             hhcCCCCC-CCCCHHHHHHHHHHhccCCCCceeccEEEecCC
Q 021960          255 SGLGNLKG-TTLRSKDIAEAALYLASDESRYVSGHNLVVDGG  295 (305)
Q Consensus       255 ~~~~~~~~-~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG  295 (305)
                      .....+.+ ++.+|+++|..++||++......+|..+..|.+
T Consensus       234 ~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~g~~~~~~~  275 (315)
T PRK06196        234 DEHGNPIDPGFKTPAQGAATQVWAATSPQLAGMGGLYCEDCD  275 (315)
T ss_pred             hhhhhhhhhhcCCHhHHHHHHHHHhcCCccCCCCCeEeCCCc
Confidence            00011111 456899999999999986544444555555543

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1e-32  Score=239.65  Aligned_cols=243  Identities=36%  Similarity=0.548  Sum_probs=201.8

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcch-hhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTL-GSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~-~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      .++.|++|||||+|+||++++++|+++|++|+++.++... .+......  .+.++.++.+|++|.++++++++++.+.+
T Consensus         3 ~~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   82 (249)
T PRK12825          3 SLMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERF   82 (249)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHc
Confidence            4567899999999999999999999999998876665432 22222221  23568899999999999999999998888


Q ss_pred             CCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchh
Q 021960          105 GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTA  184 (305)
Q Consensus       105 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~  184 (305)
                      +++|++||+||....    ..+.+.+.+++++.+++|+.+++++++.+.+.+.+.+.+++|++||..+..+.++...|+.
T Consensus        83 ~~id~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~~~~~~~y~~  158 (249)
T PRK12825         83 GRIDILVNNAGIFED----KPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPGWPGRSNYAA  158 (249)
T ss_pred             CCCCEEEECCccCCC----CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCCCCCCchHHHH
Confidence            899999999996533    4566778999999999999999999999999998888889999999999888888899999


Q ss_pred             hHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCC
Q 021960          185 SKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT  264 (305)
Q Consensus       185 sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (305)
                      +|++++++++.++.++.+.|++++.|+||.+.|++.......                  .....      ....+.+++
T Consensus       159 sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~------------------~~~~~------~~~~~~~~~  214 (249)
T PRK12825        159 AKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEATIEE------------------AREAK------DAETPLGRS  214 (249)
T ss_pred             HHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCccccccch------------------hHHhh------hccCCCCCC
Confidence            999999999999999988899999999999999975432111                  00000      002456678


Q ss_pred             CCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          265 LRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       265 ~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      .+++|+++.+.+++++...+++|++|.++||...
T Consensus       215 ~~~~dva~~~~~~~~~~~~~~~g~~~~i~~g~~~  248 (249)
T PRK12825        215 GTPEDIARAVAFLCSDASDYITGQVIEVTGGVDV  248 (249)
T ss_pred             cCHHHHHHHHHHHhCccccCcCCCEEEeCCCEee
Confidence            8999999999999998888899999999999764

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=9.1e-33  Score=241.06  Aligned_cols=243  Identities=31%  Similarity=0.408  Sum_probs=194.9

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCc-chhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVED-TLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~-~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      +++++++|||||+|+||++++++|+++|++|++..++. ..........  .+.++.++.+|+++.++++++++++.+.+
T Consensus         3 ~~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (252)
T PRK06077          3 SLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRY   82 (252)
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHc
Confidence            46789999999999999999999999999988766543 2221111111  23457889999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchh
Q 021960          105 GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTA  184 (305)
Q Consensus       105 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~  184 (305)
                      +++|+||||||....    .++.+.+.+.+++.+++|+.+++.+++.+.+.+.+  .++||++||..+..+.++...|++
T Consensus        83 ~~~d~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~iv~~sS~~~~~~~~~~~~Y~~  156 (252)
T PRK06077         83 GVADILVNNAGLGLF----SPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMRE--GGAIVNIASVAGIRPAYGLSIYGA  156 (252)
T ss_pred             CCCCEEEECCCCCCC----CChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhc--CcEEEEEcchhccCCCCCchHHHH
Confidence            999999999997543    45667788899999999999999999999998854  479999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCC
Q 021960          185 SKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT  264 (305)
Q Consensus       185 sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (305)
                      +|+++++++++++.|+++ +++++.|.||+++|++.........            .+.+.       +... ..+.+++
T Consensus       157 sK~~~~~~~~~l~~~~~~-~i~v~~v~Pg~i~t~~~~~~~~~~~------------~~~~~-------~~~~-~~~~~~~  215 (252)
T PRK06077        157 MKAAVINLTKYLALELAP-KIRVNAIAPGFVKTKLGESLFKVLG------------MSEKE-------FAEK-FTLMGKI  215 (252)
T ss_pred             HHHHHHHHHHHHHHHHhc-CCEEEEEeeCCccChHHHhhhhccc------------ccHHH-------HHHh-cCcCCCC
Confidence            999999999999999987 8999999999999998543221100            00011       1111 1235678


Q ss_pred             CCHHHHHHHHHHhccCCCCceeccEEEecCCcccc
Q 021960          265 LRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTS  299 (305)
Q Consensus       265 ~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~  299 (305)
                      ++|+|+|+.++++++..  ..+|+++++|+|..+-
T Consensus       216 ~~~~dva~~~~~~~~~~--~~~g~~~~i~~g~~~~  248 (252)
T PRK06077        216 LDPEEVAEFVAAILKIE--SITGQVFVLDSGESLK  248 (252)
T ss_pred             CCHHHHHHHHHHHhCcc--ccCCCeEEecCCeecc
Confidence            99999999999999743  5789999999997653

>PRK07041 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.6e-33  Score=239.90  Aligned_cols=228  Identities=24%  Similarity=0.297  Sum_probs=183.0

Q ss_pred             EEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcC-CCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEEEEc
Q 021960           35 IITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLA-PAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILYNN  113 (305)
Q Consensus        35 lVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~-~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~li~n  113 (305)
                      |||||++|||++++++|+++|++|++++|+....+.....+. +.++.++.+|++|.+++.++++++    +++|+||||
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~----~~id~li~~   76 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEA----GPFDHVVIT   76 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhc----CCCCEEEEC
Confidence            699999999999999999999999999998655444333322 356889999999999999888753    789999999


Q ss_pred             CCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhHHHHHHHH
Q 021960          114 AGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLT  193 (305)
Q Consensus       114 ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~~  193 (305)
                      +|....    .++.+.+.+++++.+++|+.+++++.+  .+.+  ++.++||++||..+..+.++...|+++|+++++++
T Consensus        77 ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~--~~~~--~~~g~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~  148 (230)
T PRK07041         77 AADTPG----GPVRALPLAAAQAAMDSKFWGAYRVAR--AARI--APGGSLTFVSGFAAVRPSASGVLQGAINAALEALA  148 (230)
T ss_pred             CCCCCC----CChhhCCHHHHHHHHHHHHHHHHHHHh--hhhh--cCCeEEEEECchhhcCCCCcchHHHHHHHHHHHHH
Confidence            997643    456678899999999999999999998  3444  45689999999999999899999999999999999


Q ss_pred             HHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCCHHHHHHH
Q 021960          194 KNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSKDIAEA  273 (305)
Q Consensus       194 ~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  273 (305)
                      ++++.|+..  +++++++||+++|++.......                  ...........  ..+.++..+|+|+|+.
T Consensus       149 ~~la~e~~~--irv~~i~pg~~~t~~~~~~~~~------------------~~~~~~~~~~~--~~~~~~~~~~~dva~~  206 (230)
T PRK07041        149 RGLALELAP--VRVNTVSPGLVDTPLWSKLAGD------------------AREAMFAAAAE--RLPARRVGQPEDVANA  206 (230)
T ss_pred             HHHHHHhhC--ceEEEEeecccccHHHHhhhcc------------------chHHHHHHHHh--cCCCCCCcCHHHHHHH
Confidence            999999864  9999999999999985321100                  00001111111  2355677899999999


Q ss_pred             HHHhccCCCCceeccEEEecCCccc
Q 021960          274 ALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       274 v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      ++||+++  .+++|+++.+|||..+
T Consensus       207 ~~~l~~~--~~~~G~~~~v~gg~~~  229 (230)
T PRK07041        207 ILFLAAN--GFTTGSTVLVDGGHAI  229 (230)
T ss_pred             HHHHhcC--CCcCCcEEEeCCCeec
Confidence            9999985  4799999999999764

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=100.00  E-value=9.6e-33  Score=240.85  Aligned_cols=233  Identities=23%  Similarity=0.321  Sum_probs=190.4

Q ss_pred             CEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEEE
Q 021960           32 KVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILY  111 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~li  111 (305)
                      ++++||||+||||+++++.|+++|++|++++|+....+.+.... +.++.++.+|++|.++++++++++.+.++++|++|
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi   79 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL-GDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLV   79 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-ccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            47899999999999999999999999999999876655444333 34588899999999999999999999999999999


Q ss_pred             EcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhHHHHHH
Q 021960          112 NNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVG  191 (305)
Q Consensus       112 ~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKaa~~~  191 (305)
                      ||||.....   .++.+.+.+++++.+++|+.+++.+++.+++.|.+++.++||++||..+..+.++...|+++|+++++
T Consensus        80 ~~ag~~~~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~~~~~  156 (248)
T PRK10538         80 NNAGLALGL---EPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQ  156 (248)
T ss_pred             ECCCccCCC---CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCCCCCCCchhHHHHHHHHH
Confidence            999975321   35567789999999999999999999999999988888899999999998888889999999999999


Q ss_pred             HHHHHHHHHCcCCcEEEEEeCCccccccchhc-ccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCCHHHH
Q 021960          192 LTKNAACELGRYGIRVNCISPFGVATSMLVNA-WRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSKDI  270 (305)
Q Consensus       192 ~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv  270 (305)
                      +++.++.++.+++|++++|+||++.|++.... ...               + ..   ......     .....++|+|+
T Consensus       157 ~~~~l~~~~~~~~i~v~~v~pg~i~~~~~~~~~~~~---------------~-~~---~~~~~~-----~~~~~~~~~dv  212 (248)
T PRK10538        157 FSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKG---------------D-DG---KAEKTY-----QNTVALTPEDV  212 (248)
T ss_pred             HHHHHHHHhcCCCcEEEEEeCCeecccccchhhccC---------------c-HH---HHHhhc-----cccCCCCHHHH
Confidence            99999999999999999999999985543211 111               0 00   000000     11234689999


Q ss_pred             HHHHHHhccCCCCceeccEEEe
Q 021960          271 AEAALYLASDESRYVSGHNLVV  292 (305)
Q Consensus       271 a~~v~~l~s~~~~~~tG~~i~i  292 (305)
                      |+.++|+++....+.+++....
T Consensus       213 A~~~~~l~~~~~~~~~~~~~~~  234 (248)
T PRK10538        213 SEAVWWVATLPAHVNINTLEMM  234 (248)
T ss_pred             HHHHHHHhcCCCcccchhhccc
Confidence            9999999998877777766544

>PRK06914 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.5e-33  Score=245.30  Aligned_cols=253  Identities=23%  Similarity=0.297  Sum_probs=198.3

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc----CCCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           29 LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL----APAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        29 l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~----~~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      |++|++|||||+|+||+++++.|+++|++|++++|+....+...+..    .+.++.++.+|++|.+++++ ++++.+.+
T Consensus         1 ~~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~   79 (280)
T PRK06914          1 MNKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEI   79 (280)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhc
Confidence            46789999999999999999999999999999998866554443322    13468899999999999999 88888888


Q ss_pred             CCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchh
Q 021960          105 GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTA  184 (305)
Q Consensus       105 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~  184 (305)
                      +++|++|||||....    ..+.+.+.+++++.+++|+.+++.+++.+++.|.+.+.++||++||..+..+.++...|++
T Consensus        80 ~~id~vv~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~  155 (280)
T PRK06914         80 GRIDLLVNNAGYANG----GFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRVGFPGLSPYVS  155 (280)
T ss_pred             CCeeEEEECCccccc----CccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccCCCCCCchhHH
Confidence            999999999997654    4566778999999999999999999999999998887899999999999999899999999


Q ss_pred             hHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCC
Q 021960          185 SKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT  264 (305)
Q Consensus       185 sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (305)
                      +|++++.++++++.|+.++||+++.++||+++|++............      ....+.........   .....+.+++
T Consensus       156 sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~------~~~~~~~~~~~~~~---~~~~~~~~~~  226 (280)
T PRK06914        156 SKYALEGFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQS------ETTSPYKEYMKKIQ---KHINSGSDTF  226 (280)
T ss_pred             hHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccchhhcccccccccc------ccccchHHHHHHHH---HHHhhhhhcc
Confidence            99999999999999999999999999999999997543221100000      00001111111111   1112344677


Q ss_pred             CCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          265 LRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       265 ~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      .+++|+|+.+++++++...   +..+.+++|..+
T Consensus       227 ~~~~dva~~~~~~~~~~~~---~~~~~~~~~~~~  257 (280)
T PRK06914        227 GNPIDVANLIVEIAESKRP---KLRYPIGKGVKL  257 (280)
T ss_pred             CCHHHHHHHHHHHHcCCCC---CcccccCCchHH
Confidence            8999999999999987643   246777766544

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=100.00  E-value=4.8e-34  Score=234.70  Aligned_cols=235  Identities=30%  Similarity=0.399  Sum_probs=190.0

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhh---cCCCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLAST---LAPAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~---~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      ++.||.+++||+.||||++++++|+++|..+.+..-+.+..+..++.   .+...+.+++||+++..++++.++++...+
T Consensus         2 ~~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~f   81 (261)
T KOG4169|consen    2 DLTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATF   81 (261)
T ss_pred             cccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHHh
Confidence            56899999999999999999999999999766554443334333332   245679999999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC---CCEEEEecccccccCCCCCcc
Q 021960          105 GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRG---GGCIISTASVAGVMGGLGPHA  181 (305)
Q Consensus       105 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~---~~~iv~isS~~~~~~~~~~~~  181 (305)
                      |.||++||+||.+            ++.+|++.+++|+.|.++.+...+|+|.++.   +|-||++||..++.|.+-...
T Consensus        82 g~iDIlINgAGi~------------~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~p~~pV  149 (261)
T KOG4169|consen   82 GTIDILINGAGIL------------DDKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDPMPVFPV  149 (261)
T ss_pred             CceEEEEcccccc------------cchhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCccccchh
Confidence            9999999999986            3477999999999999999999999998764   578999999999999999999


Q ss_pred             chhhHHHHHHHHHHHHHHH--CcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCC
Q 021960          182 YTASKHAIVGLTKNAACEL--GRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGN  259 (305)
Q Consensus       182 Y~~sKaa~~~~~~~la~e~--~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (305)
                      |++||+++..|+|++|...  .+.||++++||||++.|.+..+.-.. +.-.+.         .+...+.++    ..  
T Consensus       150 Y~AsKaGVvgFTRSla~~ayy~~sGV~~~avCPG~t~t~l~~~~~~~-~~~~e~---------~~~~~~~l~----~~--  213 (261)
T KOG4169|consen  150 YAASKAGVVGFTRSLADLAYYQRSGVRFNAVCPGFTRTDLAENIDAS-GGYLEY---------SDSIKEALE----RA--  213 (261)
T ss_pred             hhhcccceeeeehhhhhhhhHhhcCEEEEEECCCcchHHHHHHHHhc-CCcccc---------cHHHHHHHH----Hc--
Confidence            9999999999999998864  57799999999999999997665221 111110         111222222    21  


Q ss_pred             CCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCc
Q 021960          260 LKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGV  296 (305)
Q Consensus       260 ~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~  296 (305)
                         .-.++.+++..++-.++.   ..+|+++.+|.|.
T Consensus       214 ---~~q~~~~~a~~~v~aiE~---~~NGaiw~v~~g~  244 (261)
T KOG4169|consen  214 ---PKQSPACCAINIVNAIEY---PKNGAIWKVDSGS  244 (261)
T ss_pred             ---ccCCHHHHHHHHHHHHhh---ccCCcEEEEecCc
Confidence               134688999999988876   4799999999986

>PLN02780 ketoreductase/ oxidoreductase

Probab=100.00  E-value=3.4e-33  Score=252.25  Aligned_cols=188  Identities=26%  Similarity=0.325  Sum_probs=157.0

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc----CCCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           29 LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL----APAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        29 l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~----~~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      ..|++++|||||+|||+++|++|+++|++|++++|+.+..+.+.+.+    .+.++..+.+|+++  ++.+.++++.+..
T Consensus        51 ~~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~--~~~~~~~~l~~~~  128 (320)
T PLN02780         51 KYGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSG--DIDEGVKRIKETI  128 (320)
T ss_pred             ccCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCC--CcHHHHHHHHHHh
Confidence            35899999999999999999999999999999999887766554433    23467889999985  2233333343333


Q ss_pred             C--CccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEeccccccc-C-CCCCc
Q 021960          105 G--RLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVM-G-GLGPH  180 (305)
Q Consensus       105 g--~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~-~-~~~~~  180 (305)
                      +  ++|++|||||.....  ...+.+.+.+++++.+++|+.+++.+++.++|.|.+++.|+||++||.++.. + .|+.+
T Consensus       129 ~~~didilVnnAG~~~~~--~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~p~~~  206 (320)
T PLN02780        129 EGLDVGVLINNVGVSYPY--ARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIPSDPLYA  206 (320)
T ss_pred             cCCCccEEEEecCcCCCC--CcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCccch
Confidence            4  467999999976431  1356778999999999999999999999999999988889999999999864 3 57889


Q ss_pred             cchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccc
Q 021960          181 AYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSML  220 (305)
Q Consensus       181 ~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~  220 (305)
                      .|++||+++++|+++|+.|++++||+|++|+||+++|+|.
T Consensus       207 ~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~  246 (320)
T PLN02780        207 VYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMA  246 (320)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCcc
Confidence            9999999999999999999999999999999999999984

>PRK06179 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.8e-33  Score=243.63  Aligned_cols=228  Identities=25%  Similarity=0.332  Sum_probs=187.3

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDI  109 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~  109 (305)
                      ++++++||||+||||++++++|+++|++|++++|+......      ..++.++.+|++|.++++++++.+.+.++++|+
T Consensus         3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~------~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~   76 (270)
T PRK06179          3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAP------IPGVELLELDVTDDASVQAAVDEVIARAGRIDV   76 (270)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc------cCCCeeEEeecCCHHHHHHHHHHHHHhCCCCCE
Confidence            46899999999999999999999999999999997543321      234788999999999999999999999999999


Q ss_pred             EEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhHHHH
Q 021960          110 LYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAI  189 (305)
Q Consensus       110 li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKaa~  189 (305)
                      ||||||....    ..+.+.+.+++++.+++|+.+++.+++.+++.|.+++.++||++||..+..+.++...|+++|+++
T Consensus        77 li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~  152 (270)
T PRK06179         77 LVNNAGVGLA----GAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFLPAPYMALYAASKHAV  152 (270)
T ss_pred             EEECCCCCCC----cCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccCCCCCccHHHHHHHHH
Confidence            9999998644    456678999999999999999999999999999988889999999999999999999999999999


Q ss_pred             HHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCc-HHHHHHHHHHHhhcCCCCCCCCCHH
Q 021960          190 VGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPS-QKEVRKMEEFVSGLGNLKGTTLRSK  268 (305)
Q Consensus       190 ~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  268 (305)
                      +.+++.++.|++++||++++|+||+++|++..........           .+. ...........   ..+..+..+|+
T Consensus       153 ~~~~~~l~~el~~~gi~v~~v~pg~~~t~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~---~~~~~~~~~~~  218 (270)
T PRK06179        153 EGYSESLDHEVRQFGIRVSLVEPAYTKTNFDANAPEPDSP-----------LAEYDRERAVVSKAV---AKAVKKADAPE  218 (270)
T ss_pred             HHHHHHHHHHHhhhCcEEEEEeCCCcccccccccCCCCCc-----------chhhHHHHHHHHHHH---HhccccCCCHH
Confidence            9999999999999999999999999999986543221100           000 00001111111   12334567899


Q ss_pred             HHHHHHHHhccCC
Q 021960          269 DIAEAALYLASDE  281 (305)
Q Consensus       269 dva~~v~~l~s~~  281 (305)
                      ++|+.++++++..
T Consensus       219 ~va~~~~~~~~~~  231 (270)
T PRK06179        219 VVADTVVKAALGP  231 (270)
T ss_pred             HHHHHHHHHHcCC
Confidence            9999999998865

>PRK05855 short chain dehydrogenase; Validated

Probab=100.00  E-value=1e-32  Score=268.06  Aligned_cols=236  Identities=28%  Similarity=0.376  Sum_probs=192.7

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      ..+.++++|||||+||||++++++|+++|++|++++|+....+.+.+.+  .+.++.++.+|++|.++++++++++.+.+
T Consensus       311 ~~~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  390 (582)
T PRK05855        311 GPFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEH  390 (582)
T ss_pred             ccCCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhc
Confidence            3567899999999999999999999999999999999876655544333  23468899999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-CCEEEEecccccccCCCCCccch
Q 021960          105 GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRG-GGCIISTASVAGVMGGLGPHAYT  183 (305)
Q Consensus       105 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~  183 (305)
                      |++|+||||||....    ..+.+.+.+++++++++|+.+++++++.+++.|.+++ +|+||++||.++..+.++...|+
T Consensus       391 g~id~lv~~Ag~~~~----~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~  466 (582)
T PRK05855        391 GVPDIVVNNAGIGMA----GGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSRSLPAYA  466 (582)
T ss_pred             CCCcEEEECCccCCC----CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCCCCcHHH
Confidence            999999999998643    5677889999999999999999999999999998876 48999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCC
Q 021960          184 ASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGT  263 (305)
Q Consensus       184 ~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (305)
                      ++|+++++++++++.|+.++||+|++|+||+++|+|...........             ++ .+........  ....+
T Consensus       467 ~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~-------------~~-~~~~~~~~~~--~~~~~  530 (582)
T PRK05855        467 TSKAAVLMLSECLRAELAAAGIGVTAICPGFVDTNIVATTRFAGADA-------------ED-EARRRGRADK--LYQRR  530 (582)
T ss_pred             HHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCcccchhccccCCccc-------------ch-hhhHHhhhhh--hcccc
Confidence            99999999999999999999999999999999999865432110000             00 0000000000  11234


Q ss_pred             CCCHHHHHHHHHHhccCCC
Q 021960          264 TLRSKDIAEAALYLASDES  282 (305)
Q Consensus       264 ~~~~~dva~~v~~l~s~~~  282 (305)
                      ..+||++|+.+++.++...
T Consensus       531 ~~~p~~va~~~~~~~~~~~  549 (582)
T PRK05855        531 GYGPEKVAKAIVDAVKRNK  549 (582)
T ss_pred             CCCHHHHHHHHHHHHHcCC
Confidence            4689999999999998753

>PRK05650 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.9e-32  Score=241.98  Aligned_cols=224  Identities=25%  Similarity=0.390  Sum_probs=187.4

Q ss_pred             CEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 021960           32 KVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRYGRLDI  109 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~  109 (305)
                      +++|||||+||||++++++|+++|++|++++|+....+.....+  .+.++.++.+|++|.++++++++++.+.++++|+
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~   80 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDV   80 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            47999999999999999999999999999999876655443332  2456889999999999999999999999999999


Q ss_pred             EEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhHHHH
Q 021960          110 LYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAI  189 (305)
Q Consensus       110 li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKaa~  189 (305)
                      ||||||....    ..+.+.+.+++++.+++|+.+++.+++.+++.|.+.+.++||++||..+..+.++...|+++|+++
T Consensus        81 lI~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sKaa~  156 (270)
T PRK05650         81 IVNNAGVASG----GFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQGPAMSSYNVAKAGV  156 (270)
T ss_pred             EEECCCCCCC----CCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcCCCCCchHHHHHHHHH
Confidence            9999998644    456778899999999999999999999999999888789999999999999999999999999999


Q ss_pred             HHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCCHHH
Q 021960          190 VGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSKD  269 (305)
Q Consensus       190 ~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  269 (305)
                      ++++++++.|+.+.||++++|+||+++|++........              +  .........      ..+...+++|
T Consensus       157 ~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~--------------~--~~~~~~~~~------~~~~~~~~~~  214 (270)
T PRK05650        157 VALSETLLVELADDEIGVHVVCPSFFQTNLLDSFRGPN--------------P--AMKAQVGKL------LEKSPITAAD  214 (270)
T ss_pred             HHHHHHHHHHhcccCcEEEEEecCccccCcccccccCc--------------h--hHHHHHHHH------hhcCCCCHHH
Confidence            99999999999999999999999999999865432210              0  000111111      1134568999


Q ss_pred             HHHHHHHhccCC
Q 021960          270 IAEAALYLASDE  281 (305)
Q Consensus       270 va~~v~~l~s~~  281 (305)
                      +|+.++..+++.
T Consensus       215 vA~~i~~~l~~~  226 (270)
T PRK05650        215 IADYIYQQVAKG  226 (270)
T ss_pred             HHHHHHHHHhCC
Confidence            999999998765

>PRK06194 hypothetical protein; Provisional

Probab=100.00  E-value=2.8e-32  Score=242.80  Aligned_cols=191  Identities=32%  Similarity=0.465  Sum_probs=168.2

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhcC
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRYG  105 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g  105 (305)
                      ++++|++|||||+||||++++++|+++|++|++++|+....+...+.+  .+.++.++.+|++|.++++++++.+.+.++
T Consensus         3 ~~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g   82 (287)
T PRK06194          3 DFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFG   82 (287)
T ss_pred             CCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            467899999999999999999999999999999999765544443333  244688899999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCC------CEEEEecccccccCCCCC
Q 021960          106 RLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGG------GCIISTASVAGVMGGLGP  179 (305)
Q Consensus       106 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~------~~iv~isS~~~~~~~~~~  179 (305)
                      ++|+||||||....    .++.+.+.+++++.+++|+.+++++++.++|.|.++..      ++||++||.++..+.++.
T Consensus        83 ~id~vi~~Ag~~~~----~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~  158 (287)
T PRK06194         83 AVHLLFNNAGVGAG----GLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAPPAM  158 (287)
T ss_pred             CCCEEEECCCCCCC----CCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCCC
Confidence            99999999998644    45667889999999999999999999999999987654      799999999999998899


Q ss_pred             ccchhhHHHHHHHHHHHHHHHC--cCCcEEEEEeCCccccccchh
Q 021960          180 HAYTASKHAIVGLTKNAACELG--RYGIRVNCISPFGVATSMLVN  222 (305)
Q Consensus       180 ~~Y~~sKaa~~~~~~~la~e~~--~~~i~v~~v~PG~v~T~~~~~  222 (305)
                      +.|+++|++++.++++++.|+.  ..+|++++|+||+++|++...
T Consensus       159 ~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~~~~  203 (287)
T PRK06194        159 GIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGIWQS  203 (287)
T ss_pred             cchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCccccc
Confidence            9999999999999999999987  356999999999999998654

>PRK07775 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.4e-32  Score=238.40  Aligned_cols=231  Identities=19%  Similarity=0.222  Sum_probs=186.5

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhcCC
Q 021960           29 LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRYGR  106 (305)
Q Consensus        29 l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~  106 (305)
                      ++.|+++||||+|+||++++++|+++|++|++++|+...........  .+.++.++.+|++|.+++.++++++.+.+++
T Consensus         8 ~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   87 (274)
T PRK07775          8 PDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGE   87 (274)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            46789999999999999999999999999999888765444333222  2346888999999999999999999988899


Q ss_pred             ccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhH
Q 021960          107 LDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASK  186 (305)
Q Consensus       107 id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  186 (305)
                      +|+||||||....    ....+.+.+.+++.+++|+.+++++++.+++.|.+++.++||++||..+..+.++...|+++|
T Consensus        88 id~vi~~Ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  163 (274)
T PRK07775         88 IEVLVSGAGDTYF----GKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQRPHMGAYGAAK  163 (274)
T ss_pred             CCEEEECCCcCCC----cccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCCcchHHHHH
Confidence            9999999997543    455677889999999999999999999999999887788999999999988888888999999


Q ss_pred             HHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCC
Q 021960          187 HAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLR  266 (305)
Q Consensus       187 aa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (305)
                      ++++.++++++.++.+.||++++|+||+++|++.......                  .................++++.
T Consensus       164 ~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~  225 (274)
T PRK07775        164 AGLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLPAE------------------VIGPMLEDWAKWGQARHDYFLR  225 (274)
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEeCCcccCcccccCChh------------------hhhHHHHHHHHhcccccccccC
Confidence            9999999999999988899999999999999864321100                  0000111111100123456889


Q ss_pred             HHHHHHHHHHhccCC
Q 021960          267 SKDIAEAALYLASDE  281 (305)
Q Consensus       267 ~~dva~~v~~l~s~~  281 (305)
                      ++|+|+.++++++..
T Consensus       226 ~~dva~a~~~~~~~~  240 (274)
T PRK07775        226 ASDLARAITFVAETP  240 (274)
T ss_pred             HHHHHHHHHHHhcCC
Confidence            999999999999864

>PRK09135 pteridine reductase; Provisional

Probab=100.00  E-value=9.1e-32  Score=234.11  Aligned_cols=240  Identities=28%  Similarity=0.379  Sum_probs=192.6

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcch-hhhHhhhc---CCCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           29 LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTL-GSVLASTL---APAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        29 l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~-~~~~~~~~---~~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      ++++++|||||+|+||++++++|+++|++|++++|+... .+.....+   ....+.++.+|++|.+++..+++++.+.+
T Consensus         4 ~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   83 (249)
T PRK09135          4 DSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAF   83 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            467899999999999999999999999999999886432 22222211   23458889999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchh
Q 021960          105 GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTA  184 (305)
Q Consensus       105 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~  184 (305)
                      +++|+||||||....    .++.+.+.+++++.+++|+.+++++++++.+.+.++ .+.+++++|..+..+.++...|+.
T Consensus        84 ~~~d~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Y~~  158 (249)
T PRK09135         84 GRLDALVNNASSFYP----TPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQ-RGAIVNITDIHAERPLKGYPVYCA  158 (249)
T ss_pred             CCCCEEEECCCCCCC----CChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhC-CeEEEEEeChhhcCCCCCchhHHH
Confidence            999999999997543    345567788999999999999999999999988654 478888888888888888999999


Q ss_pred             hHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCC
Q 021960          185 SKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT  264 (305)
Q Consensus       185 sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (305)
                      +|++++.+++.++.++.+ ++++++|.||+++|++....+                 +... ...   ...  ..+....
T Consensus       159 sK~~~~~~~~~l~~~~~~-~i~~~~v~pg~~~~~~~~~~~-----------------~~~~-~~~---~~~--~~~~~~~  214 (249)
T PRK09135        159 AKAALEMLTRSLALELAP-EVRVNAVAPGAILWPEDGNSF-----------------DEEA-RQA---ILA--RTPLKRI  214 (249)
T ss_pred             HHHHHHHHHHHHHHHHCC-CCeEEEEEeccccCccccccC-----------------CHHH-HHH---HHh--cCCcCCC
Confidence            999999999999999865 699999999999999743211                 1111 111   111  1345666


Q ss_pred             CCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          265 LRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       265 ~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      .+++|+++.+++++.+ ..+++|++|++|+|..+
T Consensus       215 ~~~~d~a~~~~~~~~~-~~~~~g~~~~i~~g~~~  247 (249)
T PRK09135        215 GTPEDIAEAVRFLLAD-ASFITGQILAVDGGRSL  247 (249)
T ss_pred             cCHHHHHHHHHHHcCc-cccccCcEEEECCCeec
Confidence            7899999999999875 45689999999999854

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=5.4e-32  Score=234.65  Aligned_cols=220  Identities=30%  Similarity=0.425  Sum_probs=187.8

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      .++++++++||||+|+||++++++|+++|++|++++|+....+.....+  .+.++.++.+|++|.++++++++++.+.+
T Consensus         3 ~~~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (239)
T PRK07666          3 QSLQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNEL   82 (239)
T ss_pred             ccCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            3467899999999999999999999999999999999876544433322  23468899999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchh
Q 021960          105 GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTA  184 (305)
Q Consensus       105 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~  184 (305)
                      +++|+||||+|....    ..+.+.+++++++.+++|+.+++++.+.+.+.+.+++.+++|++||..+..+.++...|+.
T Consensus        83 ~~id~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~  158 (239)
T PRK07666         83 GSIDILINNAGISKF----GKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKGAAVTSAYSA  158 (239)
T ss_pred             CCccEEEEcCccccC----CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccCCCCCcchHH
Confidence            999999999997533    4566788999999999999999999999999998888899999999999999888999999


Q ss_pred             hHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCC
Q 021960          185 SKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT  264 (305)
Q Consensus       185 sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (305)
                      +|++++.+++.++.|+.+.||+++.|+||+++|++.......                               .......
T Consensus       159 sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~-------------------------------~~~~~~~  207 (239)
T PRK07666        159 SKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDMAVDLGLT-------------------------------DGNPDKV  207 (239)
T ss_pred             HHHHHHHHHHHHHHHhhccCcEEEEEecCcccCcchhhcccc-------------------------------ccCCCCC
Confidence            999999999999999999999999999999999975332110                               0011345


Q ss_pred             CCHHHHHHHHHHhccCC
Q 021960          265 LRSKDIAEAALYLASDE  281 (305)
Q Consensus       265 ~~~~dva~~v~~l~s~~  281 (305)
                      .+++|+|+.+..+++..
T Consensus       208 ~~~~~~a~~~~~~l~~~  224 (239)
T PRK07666        208 MQPEDLAEFIVAQLKLN  224 (239)
T ss_pred             CCHHHHHHHHHHHHhCC
Confidence            78999999999999865

>PRK09072 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.4e-32  Score=238.64  Aligned_cols=220  Identities=25%  Similarity=0.346  Sum_probs=186.3

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc-CCCCeEEEEecCCCHHHHHHHHHHHHHhcCC
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL-APAPVTFVHCDVSLEEDIENLINSTVSRYGR  106 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~-~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~  106 (305)
                      .++++++|||||+||||++++++|+++|++|++++|+..........+ .+.++.++.+|++|.++++++++.+.+ +++
T Consensus         2 ~~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~-~~~   80 (263)
T PRK09072          2 DLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARARE-MGG   80 (263)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHh-cCC
Confidence            467899999999999999999999999999999999876655443332 234688999999999999999998876 789


Q ss_pred             ccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhH
Q 021960          107 LDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASK  186 (305)
Q Consensus       107 id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  186 (305)
                      +|+||||||....    .++.+.+.+++++.+++|+.+++++++.+++.|.+++.+++|++||..+..+.++...|+++|
T Consensus        81 id~lv~~ag~~~~----~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  156 (263)
T PRK09072         81 INVLINNAGVNHF----ALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIGYPGYASYCASK  156 (263)
T ss_pred             CCEEEECCCCCCc----cccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcCCCCccHHHHHH
Confidence            9999999997533    456778999999999999999999999999999888779999999999999989999999999


Q ss_pred             HHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCC
Q 021960          187 HAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLR  266 (305)
Q Consensus       187 aa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (305)
                      +++++++++++.|+.++||+|+.|+||+++|++.......                       .   .   .....+..+
T Consensus       157 ~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~~~~~~-----------------------~---~---~~~~~~~~~  207 (263)
T PRK09072        157 FALRGFSEALRRELADTGVRVLYLAPRATRTAMNSEAVQA-----------------------L---N---RALGNAMDD  207 (263)
T ss_pred             HHHHHHHHHHHHHhcccCcEEEEEecCcccccchhhhccc-----------------------c---c---ccccCCCCC
Confidence            9999999999999999999999999999999874322110                       0   0   011124668


Q ss_pred             HHHHHHHHHHhccCC
Q 021960          267 SKDIAEAALYLASDE  281 (305)
Q Consensus       267 ~~dva~~v~~l~s~~  281 (305)
                      ++|+|+.++++++..
T Consensus       208 ~~~va~~i~~~~~~~  222 (263)
T PRK09072        208 PEDVAAAVLQAIEKE  222 (263)
T ss_pred             HHHHHHHHHHHHhCC
Confidence            999999999999865

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=100.00  E-value=3e-32  Score=224.36  Aligned_cols=249  Identities=23%  Similarity=0.292  Sum_probs=209.1

Q ss_pred             CCCCCCEEEEecCC--CchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCC-CCeEEEEecCCCHHHHHHHHHHHHHh
Q 021960           27 RRLEGKVAIITGGA--RGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAP-APVTFVHCDVSLEEDIENLINSTVSR  103 (305)
Q Consensus        27 ~~l~~k~vlVtGas--~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~i~~~~~~~~~~  103 (305)
                      ..|+||++||+|-.  +.|+..||+.|.++|+.+.++...+.-.....+.... ..-.+++||+++.++++.+++++.+.
T Consensus         2 g~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~~~   81 (259)
T COG0623           2 GLLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGERLEKRVEELAEELGSDLVLPCDVTNDESIDALFATIKKK   81 (259)
T ss_pred             CccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHHHHh
Confidence            36899999999864  8999999999999999999987766443333332221 12457899999999999999999999


Q ss_pred             cCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccch
Q 021960          104 YGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYT  183 (305)
Q Consensus       104 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~  183 (305)
                      +|++|+|||+-|+.......+.+.+++.|.+...+++..++...+.+++.|+|  +.+|.+|.++-..+....|.+...+
T Consensus        82 ~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM--~~ggSiltLtYlgs~r~vPnYNvMG  159 (259)
T COG0623          82 WGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLM--NNGGSILTLTYLGSERVVPNYNVMG  159 (259)
T ss_pred             hCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhc--CCCCcEEEEEeccceeecCCCchhH
Confidence            99999999999988754455778889999999999999999999999999999  5678999999999988899999999


Q ss_pred             hhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCC
Q 021960          184 ASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGT  263 (305)
Q Consensus       184 ~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (305)
                      .+|+++++-+|.||.+++++|||||+|+-|++.|=-....                     ...+.+..+... ..|.++
T Consensus       160 vAKAaLEasvRyLA~dlG~~gIRVNaISAGPIrTLAasgI---------------------~~f~~~l~~~e~-~aPl~r  217 (259)
T COG0623         160 VAKAALEASVRYLAADLGKEGIRVNAISAGPIRTLAASGI---------------------GDFRKMLKENEA-NAPLRR  217 (259)
T ss_pred             HHHHHHHHHHHHHHHHhCccCeEEeeecccchHHHHhhcc---------------------ccHHHHHHHHHh-hCCccC
Confidence            9999999999999999999999999999999998432111                     112222222222 478899


Q ss_pred             CCCHHHHHHHHHHhccCCCCceeccEEEecCCcccc
Q 021960          264 TLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTS  299 (305)
Q Consensus       264 ~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~  299 (305)
                      .+++|||++...||+|+-++-+||+++.+|+|+.+.
T Consensus       218 ~vt~eeVG~tA~fLlSdLssgiTGei~yVD~G~~i~  253 (259)
T COG0623         218 NVTIEEVGNTAAFLLSDLSSGITGEIIYVDSGYHIM  253 (259)
T ss_pred             CCCHHHhhhhHHHHhcchhcccccceEEEcCCceee
Confidence            999999999999999999999999999999998764

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=100.00  E-value=6.9e-32  Score=235.57  Aligned_cols=241  Identities=37%  Similarity=0.566  Sum_probs=194.9

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcch--hhhHhhhcC--C-CCeEEEEecCCC-HHHHHHHHHHHH
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTL--GSVLASTLA--P-APVTFVHCDVSL-EEDIENLINSTV  101 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~--~~~~~~~~~--~-~~v~~~~~D~~d-~~~i~~~~~~~~  101 (305)
                      .+++|++|||||++|||+++|+.|+++|+.|+++.++...  .+...+...  . ..+.+..+|+++ .++++.+++.+.
T Consensus         2 ~~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~   81 (251)
T COG1028           2 DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAE   81 (251)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHH
Confidence            4678999999999999999999999999998888776543  222222111  1 357888899998 999999999999


Q ss_pred             HhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCC-c
Q 021960          102 SRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGP-H  180 (305)
Q Consensus       102 ~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~-~  180 (305)
                      +.+|++|++|||||.....   .++.+.+.+++++.+++|+.+++.+++.+.+.+.++   +||++||..+. +.++. .
T Consensus        82 ~~~g~id~lvnnAg~~~~~---~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~---~Iv~isS~~~~-~~~~~~~  154 (251)
T COG1028          82 EEFGRIDILVNNAGIAGPD---APLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQ---RIVNISSVAGL-GGPPGQA  154 (251)
T ss_pred             HHcCCCCEEEECCCCCCCC---CChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhC---eEEEECCchhc-CCCCCcc
Confidence            9999999999999986431   367788889999999999999999999778877733   99999999999 87774 9


Q ss_pred             cchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCC
Q 021960          181 AYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNL  260 (305)
Q Consensus       181 ~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (305)
                      .|++||+|+++|++.++.|+.++||++++|+||+++|++........               ...    .......  .+
T Consensus       155 ~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~t~~~~~~~~~~---------------~~~----~~~~~~~--~~  213 (251)
T COG1028         155 AYAASKAALIGLTKALALELAPRGIRVNAVAPGYIDTPMTAALESAE---------------LEA----LKRLAAR--IP  213 (251)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCCCcchhhhhhhh---------------hhH----HHHHHhc--CC
Confidence            99999999999999999999999999999999999999865432221               000    1111111  14


Q ss_pred             CCCCCCHHHHHHHHHHhccCC-CCceeccEEEecCCc
Q 021960          261 KGTTLRSKDIAEAALYLASDE-SRYVSGHNLVVDGGV  296 (305)
Q Consensus       261 ~~~~~~~~dva~~v~~l~s~~-~~~~tG~~i~idgG~  296 (305)
                      .+++..|++++..+.|+.+.. ..+++|+.+.+|||.
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~  250 (251)
T COG1028         214 LGRLGTPEEVAAAVAFLASDEAASYITGQTLPVDGGL  250 (251)
T ss_pred             CCCCcCHHHHHHHHHHHcCcchhccccCCEEEeCCCC
Confidence            447788999999999998774 778999999999986

>PRK07904 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.5e-32  Score=238.16  Aligned_cols=213  Identities=21%  Similarity=0.274  Sum_probs=175.7

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcC-CeEEEEecCcch-hhhHhhhc---CCCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHG-AKVVIADVEDTL-GSVLASTL---APAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g-~~vv~~~r~~~~-~~~~~~~~---~~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      +++++|||||++|||+++|++|+++| ++|++++|+... .+...+.+   ...+++++.+|++|.++++++++++.+ .
T Consensus         7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~-~   85 (253)
T PRK07904          7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFA-G   85 (253)
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHh-c
Confidence            57899999999999999999999995 999999998764 33332222   233689999999999999999998876 4


Q ss_pred             CCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchh
Q 021960          105 GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTA  184 (305)
Q Consensus       105 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~  184 (305)
                      +++|++|||+|.....   .. ...+.++..+.+++|+.+++.+++.+++.|.+++.++||++||..+..+.++...|++
T Consensus        86 g~id~li~~ag~~~~~---~~-~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~~~~~~~~Y~~  161 (253)
T PRK07904         86 GDVDVAIVAFGLLGDA---EE-LWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGERVRRSNFVYGS  161 (253)
T ss_pred             CCCCEEEEeeecCCch---hh-cccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcCCCCCCcchHH
Confidence            8899999999975331   11 1124556678899999999999999999999888899999999998888888889999


Q ss_pred             hHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCC
Q 021960          185 SKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT  264 (305)
Q Consensus       185 sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (305)
                      ||+++.+|+++++.|+.++||+|++|+||+++|++.....                                   .....
T Consensus       162 sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~~~~-----------------------------------~~~~~  206 (253)
T PRK07904        162 TKAGLDGFYLGLGEALREYGVRVLVVRPGQVRTRMSAHAK-----------------------------------EAPLT  206 (253)
T ss_pred             HHHHHHHHHHHHHHHHhhcCCEEEEEeeCceecchhccCC-----------------------------------CCCCC
Confidence            9999999999999999999999999999999999753210                                   00123


Q ss_pred             CCHHHHHHHHHHhccCCC
Q 021960          265 LRSKDIAEAALYLASDES  282 (305)
Q Consensus       265 ~~~~dva~~v~~l~s~~~  282 (305)
                      .+++|+|+.++..+.+..
T Consensus       207 ~~~~~~A~~i~~~~~~~~  224 (253)
T PRK07904        207 VDKEDVAKLAVTAVAKGK  224 (253)
T ss_pred             CCHHHHHHHHHHHHHcCC
Confidence            589999999999987653

>PRK07806 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8e-33  Score=241.07  Aligned_cols=235  Identities=22%  Similarity=0.225  Sum_probs=183.7

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcc-hhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDT-LGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~-~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      ++++|++|||||+||||+++++.|+++|++|++++|+.. ..+.+...+  .+.++.++.+|++|.++++++++++.+.+
T Consensus         3 ~~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (248)
T PRK07806          3 DLPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEF   82 (248)
T ss_pred             CCCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhC
Confidence            467899999999999999999999999999999888653 222222222  23457889999999999999999999888


Q ss_pred             CCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccc-----cCCCCC
Q 021960          105 GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGV-----MGGLGP  179 (305)
Q Consensus       105 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~-----~~~~~~  179 (305)
                      +.+|+||||||....    .   +.   +++..+++|+.+++++++.+.+.|.+  .+++|++||..+.     .+.+.+
T Consensus        83 ~~~d~vi~~ag~~~~----~---~~---~~~~~~~vn~~~~~~l~~~~~~~~~~--~~~iv~isS~~~~~~~~~~~~~~~  150 (248)
T PRK07806         83 GGLDALVLNASGGME----S---GM---DEDYAMRLNRDAQRNLARAALPLMPA--GSRVVFVTSHQAHFIPTVKTMPEY  150 (248)
T ss_pred             CCCcEEEECCCCCCC----C---CC---CcceeeEeeeHHHHHHHHHHHhhccC--CceEEEEeCchhhcCccccCCccc
Confidence            899999999986422    1   11   24567889999999999999998843  4799999996553     233456


Q ss_pred             ccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCC
Q 021960          180 HAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGN  259 (305)
Q Consensus       180 ~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (305)
                      ..|+.+|++++.+++.++.|++..+|+|++|.||++.|++........             .+  .....       ...
T Consensus       151 ~~Y~~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~-------------~~--~~~~~-------~~~  208 (248)
T PRK07806        151 EPVARSKRAGEDALRALRPELAEKGIGFVVVSGDMIEGTVTATLLNRL-------------NP--GAIEA-------RRE  208 (248)
T ss_pred             cHHHHHHHHHHHHHHHHHHHhhccCeEEEEeCCccccCchhhhhhccC-------------CH--HHHHH-------HHh
Confidence            789999999999999999999999999999999999998754332110             00  11110       013


Q ss_pred             CCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          260 LKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       260 ~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      +.+++.+|+|+|+.++++++.  .+++|++|.++||...
T Consensus       209 ~~~~~~~~~dva~~~~~l~~~--~~~~g~~~~i~~~~~~  245 (248)
T PRK07806        209 AAGKLYTVSEFAAEVARAVTA--PVPSGHIEYVGGADYF  245 (248)
T ss_pred             hhcccCCHHHHHHHHHHHhhc--cccCccEEEecCccce
Confidence            457899999999999999984  4789999999999754

>PRK08267 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.5e-32  Score=238.14  Aligned_cols=220  Identities=31%  Similarity=0.409  Sum_probs=186.1

Q ss_pred             CEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHh-cCCccEE
Q 021960           32 KVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSR-YGRLDIL  110 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~-~g~id~l  110 (305)
                      |++|||||+||||++++++|+++|++|++++|+....+.+.....+.++.++.+|++|.++++++++.+.+. ++++|+|
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~v   81 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDVL   81 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCEE
Confidence            689999999999999999999999999999998877666655544567899999999999999999988776 7899999


Q ss_pred             EEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhHHHHH
Q 021960          111 YNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIV  190 (305)
Q Consensus       111 i~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKaa~~  190 (305)
                      |||||....    ..+.+.+.+++++.+++|+.+++.+++.+.+.|..++.++||++||..+..+.++...|+.+|++++
T Consensus        82 i~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKaa~~  157 (260)
T PRK08267         82 FNNAGILRG----GPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYGQPGLAVYSATKFAVR  157 (260)
T ss_pred             EECCCCCCC----CccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCCCchhhHHHHHHHH
Confidence            999998643    4567788999999999999999999999999998888899999999999999999999999999999


Q ss_pred             HHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCCHHHH
Q 021960          191 GLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSKDI  270 (305)
Q Consensus       191 ~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv  270 (305)
                      +++++++.++.+++|++++|+||+++|++.......                  ......        ...+...+++++
T Consensus       158 ~~~~~l~~~~~~~~i~v~~i~pg~~~t~~~~~~~~~------------------~~~~~~--------~~~~~~~~~~~v  211 (260)
T PRK08267        158 GLTEALDLEWRRHGIRVADVMPLFVDTAMLDGTSNE------------------VDAGST--------KRLGVRLTPEDV  211 (260)
T ss_pred             HHHHHHHHHhcccCcEEEEEecCCcCCcccccccch------------------hhhhhH--------hhccCCCCHHHH
Confidence            999999999999999999999999999985431000                  000000        011234688999


Q ss_pred             HHHHHHhccCC
Q 021960          271 AEAALYLASDE  281 (305)
Q Consensus       271 a~~v~~l~s~~  281 (305)
                      ++.+++++...
T Consensus       212 a~~~~~~~~~~  222 (260)
T PRK08267        212 AEAVWAAVQHP  222 (260)
T ss_pred             HHHHHHHHhCC
Confidence            99999998643

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=2e-32  Score=221.70  Aligned_cols=187  Identities=22%  Similarity=0.245  Sum_probs=169.9

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRL  107 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~i  107 (305)
                      .+.|.++|||||++|||+++|++|.+.|-+|++++|+++++++.....  ..++...||+.|.++++++++.+.++|+.+
T Consensus         2 k~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~--p~~~t~v~Dv~d~~~~~~lvewLkk~~P~l   79 (245)
T COG3967           2 KTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAEN--PEIHTEVCDVADRDSRRELVEWLKKEYPNL   79 (245)
T ss_pred             cccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcC--cchheeeecccchhhHHHHHHHHHhhCCch
Confidence            467999999999999999999999999999999999999888776543  447889999999999999999999999999


Q ss_pred             cEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhHH
Q 021960          108 DILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKH  187 (305)
Q Consensus       108 d~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKa  187 (305)
                      ++||||||+....+..  =.+...++.++-+.+|+.++.++++.++|++.+++.+.||++||.-++.|......||++||
T Consensus        80 NvliNNAGIqr~~dlt--~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafvPm~~~PvYcaTKA  157 (245)
T COG3967          80 NVLINNAGIQRNEDLT--GAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFVPMASTPVYCATKA  157 (245)
T ss_pred             heeeecccccchhhcc--CCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccCcccccccchhhHH
Confidence            9999999987654211  12345678899999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCcCCcEEEEEeCCccccc
Q 021960          188 AIVGLTKNAACELGRYGIRVNCISPFGVATS  218 (305)
Q Consensus       188 a~~~~~~~la~e~~~~~i~v~~v~PG~v~T~  218 (305)
                      |++.++.+|+..++..+|.|..+.|-.|+|+
T Consensus       158 aiHsyt~aLR~Qlk~t~veVIE~~PP~V~t~  188 (245)
T COG3967         158 AIHSYTLALREQLKDTSVEVIELAPPLVDTT  188 (245)
T ss_pred             HHHHHHHHHHHHhhhcceEEEEecCCceecC
Confidence            9999999999999988999999999999997

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=100.00  E-value=7.4e-32  Score=243.25  Aligned_cols=240  Identities=20%  Similarity=0.170  Sum_probs=184.1

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcC-CeEEEEecCcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhcCC
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHG-AKVVIADVEDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRYGR  106 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g-~~vv~~~r~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~  106 (305)
                      .+|++|||||++|||+++++.|+++| ++|++++|+....+.+.+.+  .+.++.++.+|++|.++++++++++.+.+++
T Consensus         2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   81 (314)
T TIGR01289         2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRP   81 (314)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            47899999999999999999999999 99999999876655444433  2345788999999999999999999888889


Q ss_pred             ccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC--CCEEEEecccccccC---------
Q 021960          107 LDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRG--GGCIISTASVAGVMG---------  175 (305)
Q Consensus       107 id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~~~iv~isS~~~~~~---------  175 (305)
                      +|++|||||.....   .+..+.+.+++++.+++|+.+++++++.++|.|.+++  .++||++||..+..+         
T Consensus        82 iD~lI~nAG~~~~~---~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~  158 (314)
T TIGR01289        82 LDALVCNAAVYFPT---AKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVPPK  158 (314)
T ss_pred             CCEEEECCCccccC---ccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCcCCCc
Confidence            99999999975321   2334568899999999999999999999999998764  489999999876421         


Q ss_pred             ------------------------CCCCccchhhHHHHHHHHHHHHHHHC-cCCcEEEEEeCCcc-ccccchhcccCCCC
Q 021960          176 ------------------------GLGPHAYTASKHAIVGLTKNAACELG-RYGIRVNCISPFGV-ATSMLVNAWRNSGD  229 (305)
Q Consensus       176 ------------------------~~~~~~Y~~sKaa~~~~~~~la~e~~-~~~i~v~~v~PG~v-~T~~~~~~~~~~~~  229 (305)
                                              ..++..|++||+++..+++.+++++. ++||+|++|+||++ +|+|..+....   
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~l~~~~~~~---  235 (314)
T TIGR01289       159 ANLGDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTGLFREHVPL---  235 (314)
T ss_pred             ccccccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCcccccccHH---
Confidence                                    12356799999999999999999985 46899999999999 69985431100   


Q ss_pred             CchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecC
Q 021960          230 GEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDG  294 (305)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idg  294 (305)
                                      ....+..+..   ...+.+.++++.++.+++++.+.....+|..+..++
T Consensus       236 ----------------~~~~~~~~~~---~~~~~~~~~~~~a~~l~~~~~~~~~~~~g~~~~~~~  281 (314)
T TIGR01289       236 ----------------FRTLFPPFQK---YITKGYVSEEEAGERLAQVVSDPKLKKSGVYWSWGN  281 (314)
T ss_pred             ----------------HHHHHHHHHH---HHhccccchhhhhhhhHHhhcCcccCCCceeeecCC
Confidence                            0000111101   112345689999999999887654335777665433

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=100.00  E-value=2.1e-31  Score=230.38  Aligned_cols=235  Identities=34%  Similarity=0.515  Sum_probs=194.7

Q ss_pred             EEEecCCCchHHHHHHHHHHcCCeEEEEecCc-chhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEE
Q 021960           34 AIITGGARGIGEAAVRLFARHGAKVVIADVED-TLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRYGRLDIL  110 (305)
Q Consensus        34 vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~-~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~l  110 (305)
                      +||||++++||.+++++|+++|++|++++|+. ..........  .+.++.++.+|++|.++++++++.+.+.++++|+|
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   80 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDIL   80 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            58999999999999999999999999998865 2222222222  23458899999999999999999999888999999


Q ss_pred             EEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhHHHHH
Q 021960          111 YNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIV  190 (305)
Q Consensus       111 i~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKaa~~  190 (305)
                      |||+|....    ..+.+.+.+++++.+++|+.+++.+++.+.+.+.+.+.++++++||.++..+.+++..|+++|++++
T Consensus        81 i~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~~~~~~y~~~k~a~~  156 (239)
T TIGR01830        81 VNNAGITRD----NLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGNAGQANYAASKAGVI  156 (239)
T ss_pred             EECCCCCCC----CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCCCchhHHHHHHHH
Confidence            999997543    3455678899999999999999999999999987777889999999999999899999999999999


Q ss_pred             HHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCCHHHH
Q 021960          191 GLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSKDI  270 (305)
Q Consensus       191 ~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv  270 (305)
                      .+++.++.++...|++++.++||+++|++....                  + .......   ..  ..+.+++.+++|+
T Consensus       157 ~~~~~l~~~~~~~g~~~~~i~pg~~~~~~~~~~------------------~-~~~~~~~---~~--~~~~~~~~~~~~~  212 (239)
T TIGR01830       157 GFTKSLAKELASRNITVNAVAPGFIDTDMTDKL------------------S-EKVKKKI---LS--QIPLGRFGTPEEV  212 (239)
T ss_pred             HHHHHHHHHHhhcCeEEEEEEECCCCChhhhhc------------------C-hHHHHHH---Hh--cCCcCCCcCHHHH
Confidence            999999999988999999999999998864221                  0 0111111   11  2345678899999


Q ss_pred             HHHHHHhccCCCCceeccEEEecCCc
Q 021960          271 AEAALYLASDESRYVSGHNLVVDGGV  296 (305)
Q Consensus       271 a~~v~~l~s~~~~~~tG~~i~idgG~  296 (305)
                      ++.+++++++...+++|+++++|+|.
T Consensus       213 a~~~~~~~~~~~~~~~g~~~~~~~g~  238 (239)
T TIGR01830       213 ANAVAFLASDEASYITGQVIHVDGGM  238 (239)
T ss_pred             HHHHHHHhCcccCCcCCCEEEeCCCc
Confidence            99999999887788999999999986

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK06197 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.2e-32  Score=244.08  Aligned_cols=239  Identities=23%  Similarity=0.201  Sum_probs=183.8

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc----CCCCeEEEEecCCCHHHHHHHHHHHH
Q 021960           26 HRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL----APAPVTFVHCDVSLEEDIENLINSTV  101 (305)
Q Consensus        26 ~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~----~~~~v~~~~~D~~d~~~i~~~~~~~~  101 (305)
                      .+++.+|++|||||++|||+++|+.|+++|++|++++|+....+...+.+    .+.++.++.+|++|.++++++++++.
T Consensus        11 ~~~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~   90 (306)
T PRK06197         11 IPDQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALR   90 (306)
T ss_pred             cccCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHH
Confidence            35788999999999999999999999999999999999865544322222    24568899999999999999999999


Q ss_pred             HhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEeccccccc-------
Q 021960          102 SRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVM-------  174 (305)
Q Consensus       102 ~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~-------  174 (305)
                      +.++++|+||||||....      ..+.+.+.++..+++|+.+++.+++.+++.|.+.+.++||++||..+..       
T Consensus        91 ~~~~~iD~li~nAg~~~~------~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~  164 (306)
T PRK06197         91 AAYPRIDLLINNAGVMYT------PKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIRAAIHFD  164 (306)
T ss_pred             hhCCCCCEEEECCccccC------CCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhccCCCCcc
Confidence            999999999999997532      2235667889999999999999999999999887778999999987543       


Q ss_pred             ------CCCCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEE--eCCccccccchhcccCCCCCchhhhhhccCCCcHHH
Q 021960          175 ------GGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCI--SPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKE  246 (305)
Q Consensus       175 ------~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v--~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (305)
                            +.++...|+.||+++++|++.+++++++++++|+++  +||+++|+|......                    .
T Consensus       165 ~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~~~~~~~--------------------~  224 (306)
T PRK06197        165 DLQWERRYNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTELARNLPR--------------------A  224 (306)
T ss_pred             ccCcccCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCcccccCcH--------------------H
Confidence                  223456899999999999999999998888877655  799999998543210                    0


Q ss_pred             HHHHHHHHhhcCCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCc
Q 021960          247 VRKMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGV  296 (305)
Q Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~  296 (305)
                      .........    + ....++++.+..+++++.+ ..+.+|..+..||+.
T Consensus       225 ~~~~~~~~~----~-~~~~~~~~g~~~~~~~~~~-~~~~~g~~~~~~~~~  268 (306)
T PRK06197        225 LRPVATVLA----P-LLAQSPEMGALPTLRAATD-PAVRGGQYYGPDGFG  268 (306)
T ss_pred             HHHHHHHHH----h-hhcCCHHHHHHHHHHHhcC-CCcCCCeEEccCccc
Confidence            111111110    0 0123577777777776654 345789888877754

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=100.00  E-value=7.8e-32  Score=221.70  Aligned_cols=225  Identities=25%  Similarity=0.298  Sum_probs=179.7

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHc-CCeEEEEecC-cch-hhhHhh-hcCCCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           29 LEGKVAIITGGARGIGEAAVRLFARH-GAKVVIADVE-DTL-GSVLAS-TLAPAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        29 l~~k~vlVtGas~giG~~ia~~l~~~-g~~vv~~~r~-~~~-~~~~~~-~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      |..|.++||||++|||+.++++|.+. |..+++..++ .+. ..++.. .....+++.+++|+++.++++++++++.+-.
T Consensus         1 Mspksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iV   80 (249)
T KOG1611|consen    1 MSPKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIV   80 (249)
T ss_pred             CCCccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhc
Confidence            34577999999999999999999965 6777776555 333 121211 1246789999999999999999999999873


Q ss_pred             --CCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-----------CCEEEEecccc
Q 021960          105 --GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRG-----------GGCIISTASVA  171 (305)
Q Consensus       105 --g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-----------~~~iv~isS~~  171 (305)
                        ..+|.||+|||.....   ....+.+.+.|.+.+++|..++++++|+++|++++..           +..||++||.+
T Consensus        81 g~~GlnlLinNaGi~~~y---~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~  157 (249)
T KOG1611|consen   81 GSDGLNLLINNAGIALSY---NTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSA  157 (249)
T ss_pred             ccCCceEEEeccceeeec---ccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccc
Confidence              4699999999998765   5666778899999999999999999999999998643           34899999988


Q ss_pred             cccCC---CCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHH
Q 021960          172 GVMGG---LGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVR  248 (305)
Q Consensus       172 ~~~~~---~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (305)
                      +..+.   .++.+|.+||+|+++|+|+++.|+.+.+|.|.++|||||.|+|..+                          
T Consensus       158 ~s~~~~~~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TDMgg~--------------------------  211 (249)
T KOG1611|consen  158 GSIGGFRPGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTDMGGK--------------------------  211 (249)
T ss_pred             cccCCCCCcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcCCCCC--------------------------
Confidence            77543   3467999999999999999999999999999999999999999542                          


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCC
Q 021960          249 KMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGG  295 (305)
Q Consensus       249 ~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG  295 (305)
                                   ...+++||-+..++-....-...-+|-.++-||-
T Consensus       212 -------------~a~ltveeSts~l~~~i~kL~~~hnG~ffn~dlt  245 (249)
T KOG1611|consen  212 -------------KAALTVEESTSKLLASINKLKNEHNGGFFNRDGT  245 (249)
T ss_pred             -------------CcccchhhhHHHHHHHHHhcCcccCcceEccCCC
Confidence                         2345667777666666555555567887777763

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.4e-31  Score=230.23  Aligned_cols=234  Identities=24%  Similarity=0.363  Sum_probs=191.4

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcC-CCCeEEEEecCCCHHHHHHHHHHHHHhcCC
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLA-PAPVTFVHCDVSLEEDIENLINSTVSRYGR  106 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~-~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~  106 (305)
                      ++++|+++||||+|+||.++++.|+++|++|++++|++...+.+.+... ..++.++.+|++|.++++++++++...++.
T Consensus         2 ~~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   81 (238)
T PRK05786          2 RLKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNA   81 (238)
T ss_pred             CcCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            4678999999999999999999999999999999998766554433322 235888999999999999999999888889


Q ss_pred             ccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEeccccccc-CCCCCccchhh
Q 021960          107 LDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVM-GGLGPHAYTAS  185 (305)
Q Consensus       107 id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~-~~~~~~~Y~~s  185 (305)
                      +|.+|+|+|....    .++.  +.+++++.+++|+.+++++++.+++.+.+  .+++|++||..+.. +.+....|+++
T Consensus        82 id~ii~~ag~~~~----~~~~--~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~iv~~ss~~~~~~~~~~~~~Y~~s  153 (238)
T PRK05786         82 IDGLVVTVGGYVE----DTVE--EFSGLEEMLTNHIKIPLYAVNASLRFLKE--GSSIVLVSSMSGIYKASPDQLSYAVA  153 (238)
T ss_pred             CCEEEEcCCCcCC----CchH--HHHHHHHHHHHhchHHHHHHHHHHHHHhc--CCEEEEEecchhcccCCCCchHHHHH
Confidence            9999999986532    2222  33889999999999999999999998843  47899999987743 55677889999


Q ss_pred             HHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCC
Q 021960          186 KHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL  265 (305)
Q Consensus       186 Kaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (305)
                      |++++.++++++.++..++|++++|+||+++|++...                      ...+..       ........
T Consensus       154 K~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~~~----------------------~~~~~~-------~~~~~~~~  204 (238)
T PRK05786        154 KAGLAKAVEILASELLGRGIRVNGIAPTTISGDFEPE----------------------RNWKKL-------RKLGDDMA  204 (238)
T ss_pred             HHHHHHHHHHHHHHHhhcCeEEEEEecCccCCCCCch----------------------hhhhhh-------ccccCCCC
Confidence            9999999999999999899999999999999986311                      000000       01123457


Q ss_pred             CHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          266 RSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       266 ~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      +++|+++.+.+++++...+++|+.+.+|||..+
T Consensus       205 ~~~~va~~~~~~~~~~~~~~~g~~~~~~~~~~~  237 (238)
T PRK05786        205 PPEDFAKVIIWLLTDEADWVDGVVIPVDGGARL  237 (238)
T ss_pred             CHHHHHHHHHHHhcccccCccCCEEEECCcccc
Confidence            899999999999999888999999999999753

>PRK08251 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.1e-31  Score=231.07  Aligned_cols=187  Identities=22%  Similarity=0.270  Sum_probs=166.1

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc----CCCCeEEEEecCCCHHHHHHHHHHHHHhcCC
Q 021960           31 GKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL----APAPVTFVHCDVSLEEDIENLINSTVSRYGR  106 (305)
Q Consensus        31 ~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~----~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~  106 (305)
                      +|++|||||++|||++++++|+++|++|++++|+....+.+...+    .+.++.++.+|++|.++++++++++.+.+++
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG   81 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            689999999999999999999999999999999876655443322    2456899999999999999999999999999


Q ss_pred             ccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCC-Cccchhh
Q 021960          107 LDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLG-PHAYTAS  185 (305)
Q Consensus       107 id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~-~~~Y~~s  185 (305)
                      +|++|||||....    ..+.+.+.+.+++.+++|+.+++.+++.+.+.|.+.+.++||++||..+..+.++ ...|+.+
T Consensus        82 id~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~Y~~s  157 (248)
T PRK08251         82 LDRVIVNAGIGKG----ARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRGLPGVKAAYAAS  157 (248)
T ss_pred             CCEEEECCCcCCC----CCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccCCCCCcccHHHH
Confidence            9999999998643    4556678899999999999999999999999998888889999999998888775 6889999


Q ss_pred             HHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccch
Q 021960          186 KHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLV  221 (305)
Q Consensus       186 Kaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~  221 (305)
                      |++++.+++.++.++...+++++.|+||+++|++..
T Consensus       158 K~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~  193 (248)
T PRK08251        158 KAGVASLGEGLRAELAKTPIKVSTIEPGYIRSEMNA  193 (248)
T ss_pred             HHHHHHHHHHHHHHhcccCcEEEEEecCcCcchhhh
Confidence            999999999999999988999999999999999854

>PRK06482 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.4e-31  Score=232.09  Aligned_cols=246  Identities=18%  Similarity=0.230  Sum_probs=192.8

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEE
Q 021960           31 GKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDIL  110 (305)
Q Consensus        31 ~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~l  110 (305)
                      .|++|||||+|+||++++++|+++|++|+++.|+....+.+.+.. +.++.++.+|++|.++++++++++.+.++++|+|
T Consensus         2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   80 (276)
T PRK06482          2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARY-GDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVV   80 (276)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-cCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            478999999999999999999999999999999876555444333 3468899999999999999999998888999999


Q ss_pred             EEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhHHHHH
Q 021960          111 YNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIV  190 (305)
Q Consensus       111 i~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKaa~~  190 (305)
                      |||||....    ....+.+.+++++.+++|+.+++++++.++|.|.+++.++||++||..+..+.++...|+++|++++
T Consensus        81 i~~ag~~~~----~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~  156 (276)
T PRK06482         81 VSNAGYGLF----GAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQIAYPGFSLYHATKWGIE  156 (276)
T ss_pred             EECCCCCCC----cccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccccCCCCCchhHHHHHHHH
Confidence            999997643    4566778899999999999999999999999998888899999999998888889999999999999


Q ss_pred             HHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCCHHHH
Q 021960          191 GLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSKDI  270 (305)
Q Consensus       191 ~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv  270 (305)
                      .++++++.++.++|++++.++||.+.|++...........      .....+..    .+......  .......+++|+
T Consensus       157 ~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~------~~~~~~~~----~~~~~~~~--~~~~~~~d~~~~  224 (276)
T PRK06482        157 GFVEAVAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLD------AYDDTPVG----DLRRALAD--GSFAIPGDPQKM  224 (276)
T ss_pred             HHHHHHHHHhhccCcEEEEEeCCccccCCcccccccCCCc------cccchhhH----HHHHHHhh--ccCCCCCCHHHH
Confidence            9999999999989999999999999998843321110000      00011111    11111111  122234689999


Q ss_pred             HHHHHHhccCCCCceeccEEEecCCc
Q 021960          271 AEAALYLASDESRYVSGHNLVVDGGV  296 (305)
Q Consensus       271 a~~v~~l~s~~~~~~tG~~i~idgG~  296 (305)
                      +++++..+...   ..+..+++.+|.
T Consensus       225 ~~a~~~~~~~~---~~~~~~~~g~~~  247 (276)
T PRK06482        225 VQAMIASADQT---PAPRRLTLGSDA  247 (276)
T ss_pred             HHHHHHHHcCC---CCCeEEecChHH
Confidence            99999988644   235557776664

>PRK07578 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-31  Score=225.45  Aligned_cols=197  Identities=20%  Similarity=0.260  Sum_probs=168.6

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEEEE
Q 021960           33 VAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILYN  112 (305)
Q Consensus        33 ~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~li~  112 (305)
                      ++|||||++|||++++++|+++ ++|++++|+..               .+.+|++|.+++++++++    .+++|+|||
T Consensus         2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~---------------~~~~D~~~~~~~~~~~~~----~~~id~lv~   61 (199)
T PRK07578          2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSG---------------DVQVDITDPASIRALFEK----VGKVDAVVS   61 (199)
T ss_pred             eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC---------------ceEecCCChHHHHHHHHh----cCCCCEEEE
Confidence            6899999999999999999999 99999988642               367999999999988765    378999999


Q ss_pred             cCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhHHHHHHH
Q 021960          113 NAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGL  192 (305)
Q Consensus       113 nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~  192 (305)
                      |||....    .++.+.+.++|++.+++|+.+++++.+.+.|.|.+  .++|+++||..+..+.++...|+++|+++++|
T Consensus        62 ~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~~  135 (199)
T PRK07578         62 AAGKVHF----APLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLND--GGSFTLTSGILSDEPIPGGASAATVNGALEGF  135 (199)
T ss_pred             CCCCCCC----CchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCeEEEEcccccCCCCCCchHHHHHHHHHHHH
Confidence            9997533    56777899999999999999999999999999854  47899999999999989999999999999999


Q ss_pred             HHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 021960          193 TKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSKDIAE  272 (305)
Q Consensus       193 ~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  272 (305)
                      +++++.|+ ++||+|++|+||+++|++....                            ..     .+.....+++|+|+
T Consensus       136 ~~~la~e~-~~gi~v~~i~Pg~v~t~~~~~~----------------------------~~-----~~~~~~~~~~~~a~  181 (199)
T PRK07578        136 VKAAALEL-PRGIRINVVSPTVLTESLEKYG----------------------------PF-----FPGFEPVPAARVAL  181 (199)
T ss_pred             HHHHHHHc-cCCeEEEEEcCCcccCchhhhh----------------------------hc-----CCCCCCCCHHHHHH
Confidence            99999999 8899999999999999863100                            00     11234568999999


Q ss_pred             HHHHhccCCCCceeccEEEe
Q 021960          273 AALYLASDESRYVSGHNLVV  292 (305)
Q Consensus       273 ~v~~l~s~~~~~~tG~~i~i  292 (305)
                      .+.++++.   ..+|+++.+
T Consensus       182 ~~~~~~~~---~~~g~~~~~  198 (199)
T PRK07578        182 AYVRSVEG---AQTGEVYKV  198 (199)
T ss_pred             HHHHHhcc---ceeeEEecc
Confidence            99999874   489998875

>PRK05854 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.6e-32  Score=243.94  Aligned_cols=189  Identities=24%  Similarity=0.278  Sum_probs=161.1

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc----CCCCeEEEEecCCCHHHHHHHHHHHHH
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL----APAPVTFVHCDVSLEEDIENLINSTVS  102 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~----~~~~v~~~~~D~~d~~~i~~~~~~~~~  102 (305)
                      +++++|+++||||++|||+++|+.|+++|++|++++|+....+...+.+    .+.++.++.+|++|.++++++++++.+
T Consensus        10 ~~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~   89 (313)
T PRK05854         10 PDLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRA   89 (313)
T ss_pred             cccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHH
Confidence            4678999999999999999999999999999999999876554433322    234688999999999999999999999


Q ss_pred             hcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccC-------
Q 021960          103 RYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMG-------  175 (305)
Q Consensus       103 ~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~-------  175 (305)
                      .++++|+||||||....     +..+.+.+.++..+++|+.+++++++.++|.|.+. .++||++||.++..+       
T Consensus        90 ~~~~iD~li~nAG~~~~-----~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~-~~riv~vsS~~~~~~~~~~~~~  163 (313)
T PRK05854         90 EGRPIHLLINNAGVMTP-----PERQTTADGFELQFGTNHLGHFALTAHLLPLLRAG-RARVTSQSSIAARRGAINWDDL  163 (313)
T ss_pred             hCCCccEEEECCccccC-----CccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhC-CCCeEEEechhhcCCCcCcccc
Confidence            99999999999997532     23356778999999999999999999999999754 689999999887653       


Q ss_pred             -----CCCCccchhhHHHHHHHHHHHHHHH--CcCCcEEEEEeCCccccccch
Q 021960          176 -----GLGPHAYTASKHAIVGLTKNAACEL--GRYGIRVNCISPFGVATSMLV  221 (305)
Q Consensus       176 -----~~~~~~Y~~sKaa~~~~~~~la~e~--~~~~i~v~~v~PG~v~T~~~~  221 (305)
                           .+++..|+.||+++.+|++.|+.++  ...||+||+|+||++.|++..
T Consensus       164 ~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~~~~  216 (313)
T PRK05854        164 NWERSYAGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTNLLA  216 (313)
T ss_pred             cccccCcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccCccc
Confidence                 2446789999999999999999864  457899999999999999853

>PRK07102 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.5e-31  Score=228.95  Aligned_cols=211  Identities=22%  Similarity=0.243  Sum_probs=179.8

Q ss_pred             CEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc---CCCCeEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 021960           32 KVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL---APAPVTFVHCDVSLEEDIENLINSTVSRYGRLD  108 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~---~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id  108 (305)
                      |+++||||++|||+++++.|+++|++|++++|+....+...+.+   .+.++.++.+|++|.++++++++++.+   ++|
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~---~~d   78 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPA---LPD   78 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhh---cCC
Confidence            68999999999999999999999999999999876554433322   235689999999999999999887754   479


Q ss_pred             EEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhHHH
Q 021960          109 ILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHA  188 (305)
Q Consensus       109 ~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKaa  188 (305)
                      ++|||+|....    ..+.+.+.+++.+.+++|+.+++++++.+.+.|.+++.++||++||..+..+.++...|+++|++
T Consensus        79 ~vv~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  154 (243)
T PRK07102         79 IVLIAVGTLGD----QAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRGRASNYVYGSAKAA  154 (243)
T ss_pred             EEEECCcCCCC----cccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccCCCCCCcccHHHHHH
Confidence            99999997643    45667889999999999999999999999999988888999999999998888889999999999


Q ss_pred             HHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCCHH
Q 021960          189 IVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSK  268 (305)
Q Consensus       189 ~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (305)
                      +++++++++.|+.+.||++++|+||+++|++..+.                                  ..+.....+++
T Consensus       155 ~~~~~~~l~~el~~~gi~v~~v~pg~v~t~~~~~~----------------------------------~~~~~~~~~~~  200 (243)
T PRK07102        155 LTAFLSGLRNRLFKSGVHVLTVKPGFVRTPMTAGL----------------------------------KLPGPLTAQPE  200 (243)
T ss_pred             HHHHHHHHHHHhhccCcEEEEEecCcccChhhhcc----------------------------------CCCccccCCHH
Confidence            99999999999999999999999999999874321                                  01223456899


Q ss_pred             HHHHHHHHhccCCCC
Q 021960          269 DIAEAALYLASDESR  283 (305)
Q Consensus       269 dva~~v~~l~s~~~~  283 (305)
                      ++++.++..++++..
T Consensus       201 ~~a~~i~~~~~~~~~  215 (243)
T PRK07102        201 EVAKDIFRAIEKGKD  215 (243)
T ss_pred             HHHHHHHHHHhCCCC
Confidence            999999999987643

>PRK05693 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-30  Score=231.00  Aligned_cols=232  Identities=23%  Similarity=0.264  Sum_probs=182.2

Q ss_pred             CEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEEE
Q 021960           32 KVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILY  111 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~li  111 (305)
                      |++|||||+||||+++++.|+++|++|++++|+....+.+..    ..+.++.+|++|.++++++++++.+.++++|+||
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~----~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi   77 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAA----AGFTAVQLDVNDGAALARLAEELEAEHGGLDVLI   77 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----CCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence            689999999999999999999999999999998665443322    2367889999999999999999999999999999


Q ss_pred             EcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhHHHHHH
Q 021960          112 NNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVG  191 (305)
Q Consensus       112 ~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKaa~~~  191 (305)
                      ||||....    .++.+.+.+++++.+++|+.+++.+++.+++.|.+ ..++||++||..+..+.++...|+++|++++.
T Consensus        78 ~~ag~~~~----~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-~~g~iv~isS~~~~~~~~~~~~Y~~sK~al~~  152 (274)
T PRK05693         78 NNAGYGAM----GPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRR-SRGLVVNIGSVSGVLVTPFAGAYCASKAAVHA  152 (274)
T ss_pred             ECCCCCCC----CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhh-cCCEEEEECCccccCCCCCccHHHHHHHHHHH
Confidence            99997543    46677899999999999999999999999998864 45899999999999888889999999999999


Q ss_pred             HHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCCHHHHH
Q 021960          192 LTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSKDIA  271 (305)
Q Consensus       192 ~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva  271 (305)
                      ++++++.|++++||+|++|+||+++|++........      ........|.....+.+......   ......+|+++|
T Consensus       153 ~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~a  223 (274)
T PRK05693        153 LSDALRLELAPFGVQVMEVQPGAIASQFASNASREA------EQLLAEQSPWWPLREHIQARARA---SQDNPTPAAEFA  223 (274)
T ss_pred             HHHHHHHHhhhhCeEEEEEecCccccccccccccch------hhcCCCCCccHHHHHHHHHHHHh---ccCCCCCHHHHH
Confidence            999999999999999999999999999854321110      00000111221111222111111   112345899999


Q ss_pred             HHHHHhccCC
Q 021960          272 EAALYLASDE  281 (305)
Q Consensus       272 ~~v~~l~s~~  281 (305)
                      +.++..+...
T Consensus       224 ~~i~~~~~~~  233 (274)
T PRK05693        224 RQLLAAVQQS  233 (274)
T ss_pred             HHHHHHHhCC
Confidence            9998887643

>PRK06181 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.1e-31  Score=230.82  Aligned_cols=223  Identities=34%  Similarity=0.428  Sum_probs=184.2

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 021960           31 GKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRYGRLD  108 (305)
Q Consensus        31 ~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id  108 (305)
                      ++++|||||+|+||+++++.|+++|++|++++|+....+...+.+  .+.++.++.+|++|.++++.+++++.+.++++|
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   80 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGID   80 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            478999999999999999999999999999999865544333222  234688899999999999999999999999999


Q ss_pred             EEEEcCCCCCCCCCCCcccCC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhHH
Q 021960          109 ILYNNAGVLGNQRKHKSIIDF-DADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKH  187 (305)
Q Consensus       109 ~li~nag~~~~~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKa  187 (305)
                      +||||||....    ..+.+. +.+++++.+++|+.+++.+++.+.+.|.++ .+++|++||..+..+.++...|+.+|+
T Consensus        81 ~vi~~ag~~~~----~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK~  155 (263)
T PRK06181         81 ILVNNAGITMW----SRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKAS-RGQIVVVSSLAGLTGVPTRSGYAASKH  155 (263)
T ss_pred             EEEECCCcccc----cchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCEEEEEecccccCCCCCccHHHHHHH
Confidence            99999997643    455666 889999999999999999999999988654 589999999999988889999999999


Q ss_pred             HHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCCH
Q 021960          188 AIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRS  267 (305)
Q Consensus       188 a~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (305)
                      ++++++++++.++.+++++++++.||++.|++....+.....            +.           ........++++|
T Consensus       156 ~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~~~~------------~~-----------~~~~~~~~~~~~~  212 (263)
T PRK06181        156 ALHGFFDSLRIELADDGVAVTVVCPGFVATDIRKRALDGDGK------------PL-----------GKSPMQESKIMSA  212 (263)
T ss_pred             HHHHHHHHHHHHhhhcCceEEEEecCccccCcchhhcccccc------------cc-----------ccccccccCCCCH
Confidence            999999999999999999999999999999986543321000            00           0001112367899


Q ss_pred             HHHHHHHHHhccCC
Q 021960          268 KDIAEAALYLASDE  281 (305)
Q Consensus       268 ~dva~~v~~l~s~~  281 (305)
                      +|+|+.+.++++..
T Consensus       213 ~dva~~i~~~~~~~  226 (263)
T PRK06181        213 EECAEAILPAIARR  226 (263)
T ss_pred             HHHHHHHHHHhhCC
Confidence            99999999999865

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.98  E-value=7.6e-31  Score=228.04  Aligned_cols=227  Identities=21%  Similarity=0.214  Sum_probs=179.8

Q ss_pred             CEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHH-HHHhc---CCc
Q 021960           32 KVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINS-TVSRY---GRL  107 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~-~~~~~---g~i  107 (305)
                      +++|||||+||||++++++|+++|++|++++|+.....  . ...+.++.++.+|++|.+++++++++ +.+.+   +++
T Consensus         2 ~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~~--~-~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~   78 (243)
T PRK07023          2 VRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPSL--A-AAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGASR   78 (243)
T ss_pred             ceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchhh--h-hccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCCCc
Confidence            37999999999999999999999999999998754321  1 12245688999999999999998776 55544   469


Q ss_pred             cEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhHH
Q 021960          108 DILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKH  187 (305)
Q Consensus       108 d~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKa  187 (305)
                      |++|||||.....   .++.+.+.+++++.+++|+.+++.+++.+.+.|.+++.++||++||..+..+.+++..|+++|+
T Consensus        79 ~~~v~~ag~~~~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  155 (243)
T PRK07023         79 VLLINNAGTVEPI---GPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARNAYAGWSVYCATKA  155 (243)
T ss_pred             eEEEEcCcccCCC---CccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcCCCCCchHHHHHHH
Confidence            9999999975432   3566778999999999999999999999999998877889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCCH
Q 021960          188 AIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRS  267 (305)
Q Consensus       188 a~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (305)
                      +++++++.++.+ ...||++++|+||+++|++....-.. . . +       ..   ...+.+..     ..+.++..+|
T Consensus       156 a~~~~~~~~~~~-~~~~i~v~~v~pg~~~t~~~~~~~~~-~-~-~-------~~---~~~~~~~~-----~~~~~~~~~~  216 (243)
T PRK07023        156 ALDHHARAVALD-ANRALRIVSLAPGVVDTGMQATIRAT-D-E-E-------RF---PMRERFRE-----LKASGALSTP  216 (243)
T ss_pred             HHHHHHHHHHhc-CCCCcEEEEecCCccccHHHHHHHhc-c-c-c-------cc---hHHHHHHH-----hhhcCCCCCH
Confidence            999999999999 77899999999999999985432100 0 0 0       00   01111111     1345788899


Q ss_pred             HHHHH-HHHHhccCCCC
Q 021960          268 KDIAE-AALYLASDESR  283 (305)
Q Consensus       268 ~dva~-~v~~l~s~~~~  283 (305)
                      +|+|+ .+.+|+++...
T Consensus       217 ~~va~~~~~~l~~~~~~  233 (243)
T PRK07023        217 EDAARRLIAYLLSDDFG  233 (243)
T ss_pred             HHHHHHHHHHHhccccC
Confidence            99999 67788877643

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=99.98  E-value=1.7e-30  Score=224.42  Aligned_cols=191  Identities=21%  Similarity=0.274  Sum_probs=170.6

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcC-
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYG-  105 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g-  105 (305)
                      ..+++|.|+|||+-+|+|+.+|++|.++|+.|+.....++..+.+..+....+...+..|++++++|+++.+.+.+..+ 
T Consensus        25 ~~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~  104 (322)
T KOG1610|consen   25 DSLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGE  104 (322)
T ss_pred             cccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhccc
Confidence            4567899999999999999999999999999998877777766665555467788899999999999999988877543 


Q ss_pred             -CccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchh
Q 021960          106 -RLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTA  184 (305)
Q Consensus       106 -~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~  184 (305)
                       .+..||||||+....   ++.+..+.+++++.+++|+.|++.+++.++|++++ .+||||++||+.+..+.|..++||+
T Consensus       105 ~gLwglVNNAGi~~~~---g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~-arGRvVnvsS~~GR~~~p~~g~Y~~  180 (322)
T KOG1610|consen  105 DGLWGLVNNAGISGFL---GPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRR-ARGRVVNVSSVLGRVALPALGPYCV  180 (322)
T ss_pred             ccceeEEecccccccc---CccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHh-ccCeEEEecccccCccCcccccchh
Confidence             399999999977543   56777899999999999999999999999997754 5799999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccch
Q 021960          185 SKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLV  221 (305)
Q Consensus       185 sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~  221 (305)
                      ||+|+++|+.++++|+.+.||.|..|.||.+.|++..
T Consensus       181 SK~aVeaf~D~lR~EL~~fGV~VsiiePG~f~T~l~~  217 (322)
T KOG1610|consen  181 SKFAVEAFSDSLRRELRPFGVKVSIIEPGFFKTNLAN  217 (322)
T ss_pred             hHHHHHHHHHHHHHHHHhcCcEEEEeccCccccccCC
Confidence            9999999999999999999999999999999999864

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.98  E-value=3.9e-32  Score=214.14  Aligned_cols=244  Identities=33%  Similarity=0.472  Sum_probs=206.3

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRL  107 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~i  107 (305)
                      ..+|-+.||||+.+|+|++.++.|+++|++|++++.-....+..++++. .++.+.++|++++++++..+.....+||++
T Consensus         6 s~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakelg-~~~vf~padvtsekdv~aala~ak~kfgrl   84 (260)
T KOG1199|consen    6 STKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKELG-GKVVFTPADVTSEKDVRAALAKAKAKFGRL   84 (260)
T ss_pred             hhcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHhC-CceEEeccccCcHHHHHHHHHHHHhhccce
Confidence            4567899999999999999999999999999999988777777777764 458899999999999999999999999999


Q ss_pred             cEEEEcCCCCCCCCCC--CcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC------CCCEEEEecccccccCCCCC
Q 021960          108 DILYNNAGVLGNQRKH--KSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINR------GGGCIISTASVAGVMGGLGP  179 (305)
Q Consensus       108 d~li~nag~~~~~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~------~~~~iv~isS~~~~~~~~~~  179 (305)
                      |.+|||||+......+  ..-...+.|++++.+++|+.++|+..+...-.|-++      .+|.||+..|.+++.+..++
T Consensus        85 d~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafdgq~gq  164 (260)
T KOG1199|consen   85 DALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFDGQTGQ  164 (260)
T ss_pred             eeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeecCccch
Confidence            9999999976432111  112235789999999999999999999888888644      25799999999999999999


Q ss_pred             ccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCC
Q 021960          180 HAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGN  259 (305)
Q Consensus       180 ~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (305)
                      ++|++||.++.+|+.-++++++..|||++.|.||.++||+..+.                       .+++..|+...-.
T Consensus       165 aaysaskgaivgmtlpiardla~~gir~~tiapglf~tpllssl-----------------------pekv~~fla~~ip  221 (260)
T KOG1199|consen  165 AAYSASKGAIVGMTLPIARDLAGDGIRFNTIAPGLFDTPLLSSL-----------------------PEKVKSFLAQLIP  221 (260)
T ss_pred             hhhhcccCceEeeechhhhhcccCceEEEeecccccCChhhhhh-----------------------hHHHHHHHHHhCC
Confidence            99999999999999999999999999999999999999996443                       1244555554433


Q ss_pred             CCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCcc
Q 021960          260 LKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT  297 (305)
Q Consensus       260 ~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~  297 (305)
                      -..+++.|.|.+..+..+.++.  |++|++|.+||...
T Consensus       222 fpsrlg~p~eyahlvqaiienp--~lngevir~dgalr  257 (260)
T KOG1199|consen  222 FPSRLGHPHEYAHLVQAIIENP--YLNGEVIRFDGALR  257 (260)
T ss_pred             CchhcCChHHHHHHHHHHHhCc--ccCCeEEEecceec
Confidence            3467889999999999888765  89999999999753

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.98  E-value=4.9e-30  Score=221.87  Aligned_cols=226  Identities=34%  Similarity=0.446  Sum_probs=188.3

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcC-CCCeEEEEecCCCHHHHHHHHHHHHHhcCC
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLA-PAPVTFVHCDVSLEEDIENLINSTVSRYGR  106 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~-~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~  106 (305)
                      .+.+++++||||+|+||++++++|+++|++|++++|+......+.+.+. ..++.++.+|++|.++++++++++.+.+++
T Consensus         3 ~~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (237)
T PRK07326          3 SLKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGG   82 (237)
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            3568999999999999999999999999999999998765554443332 146889999999999999999999999999


Q ss_pred             ccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhH
Q 021960          107 LDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASK  186 (305)
Q Consensus       107 id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  186 (305)
                      +|+||||+|....    ..+.+.+.+++++.+++|+.+++.+++++++.+ +++.++||++||..+..+.++...|+.+|
T Consensus        83 ~d~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~-~~~~~~iv~~ss~~~~~~~~~~~~y~~sk  157 (237)
T PRK07326         83 LDVLIANAGVGHF----APVEELTPEEWRLVIDTNLTGAFYTIKAAVPAL-KRGGGYIINISSLAGTNFFAGGAAYNASK  157 (237)
T ss_pred             CCEEEECCCCCCC----CchhhCCHHHHHHHHhhccHHHHHHHHHHHHHH-HHCCeEEEEECChhhccCCCCCchHHHHH
Confidence            9999999987543    456678899999999999999999999999988 44568999999999888888888999999


Q ss_pred             HHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCC
Q 021960          187 HAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLR  266 (305)
Q Consensus       187 aa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (305)
                      ++++++++.++.++...|+++++|+||++.|++.....                  .+               ......+
T Consensus       158 ~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~~~------------------~~---------------~~~~~~~  204 (237)
T PRK07326        158 FGLVGFSEAAMLDLRQYGIKVSTIMPGSVATHFNGHTP------------------SE---------------KDAWKIQ  204 (237)
T ss_pred             HHHHHHHHHHHHHhcccCcEEEEEeeccccCccccccc------------------ch---------------hhhccCC
Confidence            99999999999999989999999999999998642210                  00               0012368


Q ss_pred             HHHHHHHHHHhccCCCCceeccEEE
Q 021960          267 SKDIAEAALYLASDESRYVSGHNLV  291 (305)
Q Consensus       267 ~~dva~~v~~l~s~~~~~~tG~~i~  291 (305)
                      ++|+++.++++++...+.+.+++-.
T Consensus       205 ~~d~a~~~~~~l~~~~~~~~~~~~~  229 (237)
T PRK07326        205 PEDIAQLVLDLLKMPPRTLPSKIEV  229 (237)
T ss_pred             HHHHHHHHHHHHhCCccccccceEE
Confidence            9999999999999876666555443

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=99.97  E-value=8.8e-30  Score=230.59  Aligned_cols=239  Identities=19%  Similarity=0.147  Sum_probs=180.9

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhcC
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRYG  105 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g  105 (305)
                      .+++|++|||||++|||+++++.|+++|++|++++|+....+...+.+  .+.++.++.+|++|.++++++++++.+..+
T Consensus         3 ~~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   82 (322)
T PRK07453          3 QDAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGK   82 (322)
T ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCC
Confidence            457899999999999999999999999999999999876655444333  234688999999999999999999887777


Q ss_pred             CccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCC--CEEEEeccccccc---------
Q 021960          106 RLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGG--GCIISTASVAGVM---------  174 (305)
Q Consensus       106 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--~~iv~isS~~~~~---------  174 (305)
                      ++|+||||||.....   ....+.+.++++..+++|+.+++++++.+++.|.+++.  ++||++||.....         
T Consensus        83 ~iD~li~nAg~~~~~---~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~~~  159 (322)
T PRK07453         83 PLDALVCNAAVYMPL---LKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIPI  159 (322)
T ss_pred             CccEEEECCcccCCC---CCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCccCC
Confidence            899999999975321   12345688999999999999999999999999987653  6999999975432         


Q ss_pred             --------------------------CCCCCccchhhHHHHHHHHHHHHHHHC-cCCcEEEEEeCCcc-ccccchhcccC
Q 021960          175 --------------------------GGLGPHAYTASKHAIVGLTKNAACELG-RYGIRVNCISPFGV-ATSMLVNAWRN  226 (305)
Q Consensus       175 --------------------------~~~~~~~Y~~sKaa~~~~~~~la~e~~-~~~i~v~~v~PG~v-~T~~~~~~~~~  226 (305)
                                                +......|+.||.+...+++.+++++. .+||++++|+||++ .|++.+.... 
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~~-  238 (322)
T PRK07453        160 PAPADLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADTPLFRNTPP-  238 (322)
T ss_pred             CCccchhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCCcccccCCH-
Confidence                                      012246899999999999999999985 46899999999999 5887432110 


Q ss_pred             CCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHHhccCCCCceeccEEE
Q 021960          227 SGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLV  291 (305)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~  291 (305)
                                         ....+...+..  .......+++..++.+++++.+.....+|..+.
T Consensus       239 -------------------~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~y~~  282 (322)
T PRK07453        239 -------------------LFQKLFPWFQK--NITGGYVSQELAGERVAQVVADPEFAQSGVHWS  282 (322)
T ss_pred             -------------------HHHHHHHHHHH--HHhhceecHHHHhhHHHHhhcCcccCCCCceee
Confidence                               00001010100  111234578888888888876554446787775

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.97  E-value=4.6e-30  Score=222.91  Aligned_cols=179  Identities=23%  Similarity=0.233  Sum_probs=154.9

Q ss_pred             CEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEEE
Q 021960           32 KVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILY  111 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~li  111 (305)
                      ++++||||+||||++++++|+++|++|++++|+.+..+.+.+.  ..++.++.+|++|.++++++++++..   .+|.+|
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~---~~d~~i   76 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQ--SANIFTLAFDVTDHPGTKAALSQLPF---IPELWI   76 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHh--cCCCeEEEeeCCCHHHHHHHHHhccc---CCCEEE
Confidence            6899999999999999999999999999999987655544332  23578899999999999999887642   479999


Q ss_pred             EcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhHHHHHH
Q 021960          112 NNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVG  191 (305)
Q Consensus       112 ~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKaa~~~  191 (305)
                      ||||....    .+..+.+.+++++.+++|+.+++++++.+.+.|.  .+++||++||..+..+.++...|+++|+++++
T Consensus        77 ~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~~iv~isS~~~~~~~~~~~~Y~asK~a~~~  150 (240)
T PRK06101         77 FNAGDCEY----MDDGKVDATLMARVFNVNVLGVANCIEGIQPHLS--CGHRVVIVGSIASELALPRAEAYGASKAAVAY  150 (240)
T ss_pred             EcCccccc----CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhh--cCCeEEEEechhhccCCCCCchhhHHHHHHHH
Confidence            99986432    2334578899999999999999999999999884  34689999999999999999999999999999


Q ss_pred             HHHHHHHHHCcCCcEEEEEeCCccccccch
Q 021960          192 LTKNAACELGRYGIRVNCISPFGVATSMLV  221 (305)
Q Consensus       192 ~~~~la~e~~~~~i~v~~v~PG~v~T~~~~  221 (305)
                      |+++++.|+.++||++++|+||++.|++..
T Consensus       151 ~~~~l~~e~~~~gi~v~~v~pg~i~t~~~~  180 (240)
T PRK06101        151 FARTLQLDLRPKGIEVVTVFPGFVATPLTD  180 (240)
T ss_pred             HHHHHHHHHHhcCceEEEEeCCcCCCCCcC
Confidence            999999999999999999999999999843

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.97  E-value=4.5e-30  Score=253.47  Aligned_cols=191  Identities=26%  Similarity=0.296  Sum_probs=168.4

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      ..+++|++|||||++|||+++++.|+++|++|++++|++...+...+.+  .+.++.++.+|++|.++++++++++.+.+
T Consensus       367 ~~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  446 (657)
T PRK07201        367 GPLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEH  446 (657)
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhc
Confidence            3678999999999999999999999999999999999876655444333  24568899999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCCcccC--CCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccc
Q 021960          105 GRLDILYNNAGVLGNQRKHKSIID--FDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAY  182 (305)
Q Consensus       105 g~id~li~nag~~~~~~~~~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y  182 (305)
                      +++|++|||||....    ..+.+  .+.+++++.+++|+.+++.+++.+++.|.+++.++||++||.++..+.++.+.|
T Consensus       447 g~id~li~~Ag~~~~----~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  522 (657)
T PRK07201        447 GHVDYLVNNAGRSIR----RSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTNAPRFSAY  522 (657)
T ss_pred             CCCCEEEECCCCCCC----CChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCCcchH
Confidence            999999999997533    22222  236889999999999999999999999988888999999999999888899999


Q ss_pred             hhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccch
Q 021960          183 TASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLV  221 (305)
Q Consensus       183 ~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~  221 (305)
                      +++|+++++|+++++.|+.++||+|++|+||+++|+|..
T Consensus       523 ~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~  561 (657)
T PRK07201        523 VASKAALDAFSDVAASETLSDGITFTTIHMPLVRTPMIA  561 (657)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccccC
Confidence            999999999999999999999999999999999999853

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.97  E-value=3.4e-31  Score=215.50  Aligned_cols=186  Identities=29%  Similarity=0.317  Sum_probs=165.6

Q ss_pred             CCCEEEEecCC-CchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHH-hcCCc
Q 021960           30 EGKVAIITGGA-RGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVS-RYGRL  107 (305)
Q Consensus        30 ~~k~vlVtGas-~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~-~~g~i  107 (305)
                      +.|.|||||+| ||||.+++++|+++|+.|+.+.|+.+....++..   ..+....+|+++++++.++..++.+ .+|++
T Consensus         6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~---~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkl   82 (289)
T KOG1209|consen    6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQ---FGLKPYKLDVSKPEEVVTVSGEVRANPDGKL   82 (289)
T ss_pred             CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHh---hCCeeEEeccCChHHHHHHHHHHhhCCCCce
Confidence            45788998765 8999999999999999999999987776655432   2378899999999999999999988 68999


Q ss_pred             cEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhHH
Q 021960          108 DILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKH  187 (305)
Q Consensus       108 d~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKa  187 (305)
                      |.|+||||..-.    .+..+.+.++.++.|++|++|.+...+++. ++..+.+|.||+++|..+..|.|+.+.|.+|||
T Consensus        83 d~L~NNAG~~C~----~Pa~d~~i~ave~~f~vNvfG~irM~~a~~-h~likaKGtIVnvgSl~~~vpfpf~~iYsAsKA  157 (289)
T KOG1209|consen   83 DLLYNNAGQSCT----FPALDATIAAVEQCFKVNVFGHIRMCRALS-HFLIKAKGTIVNVGSLAGVVPFPFGSIYSASKA  157 (289)
T ss_pred             EEEEcCCCCCcc----cccccCCHHHHHhhhccceeeeehHHHHHH-HHHHHccceEEEecceeEEeccchhhhhhHHHH
Confidence            999999997644    567788999999999999999999999988 455566899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhc
Q 021960          188 AIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNA  223 (305)
Q Consensus       188 a~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~  223 (305)
                      |++.+++.|+.|+++.||+|..+.||.|.|++..+.
T Consensus       158 Aihay~~tLrlEl~PFgv~Vin~itGGv~T~Ia~k~  193 (289)
T KOG1209|consen  158 AIHAYARTLRLELKPFGVRVINAITGGVATDIADKR  193 (289)
T ss_pred             HHHHhhhhcEEeeeccccEEEEecccceecccccCC
Confidence            999999999999999999999999999999986553

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.97  E-value=1.2e-30  Score=226.81  Aligned_cols=203  Identities=31%  Similarity=0.421  Sum_probs=164.6

Q ss_pred             HHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEEEEcCCCCCCCCCCCcc
Q 021960           47 AVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSI  126 (305)
Q Consensus        47 ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~li~nag~~~~~~~~~~~  126 (305)
                      +|+.|+++|++|++++|+......         ..++.+|++|.++++++++++.   +++|+||||||....       
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~~~~~---------~~~~~~Dl~~~~~v~~~~~~~~---~~iD~li~nAG~~~~-------   61 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREPGMTL---------DGFIQADLGDPASIDAAVAALP---GRIDALFNIAGVPGT-------   61 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcchhhh---------hHhhcccCCCHHHHHHHHHHhc---CCCeEEEECCCCCCC-------
Confidence            478999999999999998654321         3467899999999999988764   679999999997421       


Q ss_pred             cCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEeccccccc---------------------------CCCCC
Q 021960          127 IDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVM---------------------------GGLGP  179 (305)
Q Consensus       127 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~---------------------------~~~~~  179 (305)
                           +.+++.+++|+.+++++++.+++.|.+  .|+||++||.++..                           +.++.
T Consensus        62 -----~~~~~~~~vN~~~~~~l~~~~~~~~~~--~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  134 (241)
T PRK12428         62 -----APVELVARVNFLGLRHLTEALLPRMAP--GGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALA  134 (241)
T ss_pred             -----CCHHHhhhhchHHHHHHHHHHHHhccC--CcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCcc
Confidence                 247889999999999999999998843  48999999998863                           55677


Q ss_pred             ccchhhHHHHHHHHHHHH-HHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcC
Q 021960          180 HAYTASKHAIVGLTKNAA-CELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLG  258 (305)
Q Consensus       180 ~~Y~~sKaa~~~~~~~la-~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (305)
                      ..|++||++++++++.++ .|++++||+||+|+||.+.|+|..+..+..               .++.   ...    ..
T Consensus       135 ~~Y~~sK~a~~~~~~~la~~e~~~~girvn~v~PG~v~T~~~~~~~~~~---------------~~~~---~~~----~~  192 (241)
T PRK12428        135 TGYQLSKEALILWTMRQAQPWFGARGIRVNCVAPGPVFTPILGDFRSML---------------GQER---VDS----DA  192 (241)
T ss_pred             cHHHHHHHHHHHHHHHHHHHhhhccCeEEEEeecCCccCcccccchhhh---------------hhHh---hhh----cc
Confidence            899999999999999999 999999999999999999999854321100               0000   000    12


Q ss_pred             CCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCcc
Q 021960          259 NLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT  297 (305)
Q Consensus       259 ~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~  297 (305)
                      .+.+++.+|||+|+.+.||+++..++++|+++.+|||+.
T Consensus       193 ~~~~~~~~pe~va~~~~~l~s~~~~~~~G~~i~vdgg~~  231 (241)
T PRK12428        193 KRMGRPATADEQAAVLVFLCSDAARWINGVNLPVDGGLA  231 (241)
T ss_pred             cccCCCCCHHHHHHHHHHHcChhhcCccCcEEEecCchH
Confidence            456778899999999999999988999999999999975

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=99.97  E-value=1.4e-30  Score=224.79  Aligned_cols=190  Identities=25%  Similarity=0.332  Sum_probs=167.8

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcC---CCCeEEEEecCCCHHHHHHHHHHHHHhcCC
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLA---PAPVTFVHCDVSLEEDIENLINSTVSRYGR  106 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~  106 (305)
                      .|+|++|||||.|||+++|++||++|++|++++|++++++..++++.   ..++.++.+|+++.+.+.+-+.+.... ..
T Consensus        48 ~g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~-~~  126 (312)
T KOG1014|consen   48 LGSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAG-LD  126 (312)
T ss_pred             cCCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcC-Cc
Confidence            46999999999999999999999999999999999999888776662   356899999999876644333332222 25


Q ss_pred             ccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhH
Q 021960          107 LDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASK  186 (305)
Q Consensus       107 id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  186 (305)
                      |.+||||+|...+.  +..+.+.+.+.+++.+++|+.+...+++.++|.|.++++|.||++||.++..|.|.++.|+++|
T Consensus       127 VgILVNNvG~~~~~--P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~~p~p~~s~ysasK  204 (312)
T KOG1014|consen  127 VGILVNNVGMSYDY--PESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGLIPTPLLSVYSASK  204 (312)
T ss_pred             eEEEEecccccCCC--cHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEeccccccccChhHHHHHHHH
Confidence            88999999998754  4778888888999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchh
Q 021960          187 HAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVN  222 (305)
Q Consensus       187 aa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~  222 (305)
                      +.++.|+++|+.|+..+||.|.++.|+.|.|+|...
T Consensus       205 ~~v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm~~~  240 (312)
T KOG1014|consen  205 AFVDFFSRCLQKEYESKGIFVQSVIPYLVATKMAKY  240 (312)
T ss_pred             HHHHHHHHHHHHHHHhcCeEEEEeehhheecccccc
Confidence            999999999999999999999999999999999643

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.97  E-value=4e-29  Score=214.87  Aligned_cols=181  Identities=24%  Similarity=0.286  Sum_probs=154.1

Q ss_pred             CEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEEE
Q 021960           32 KVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILY  111 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~li  111 (305)
                      |+++||||++|||.+++++|+++|++|++++|+....+.+.+ .  .++.++.+|++|.++++++++.+.+  +++|+||
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~-~--~~~~~~~~D~~d~~~~~~~~~~~~~--~~id~vi   76 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQA-L--PGVHIEKLDMNDPASLDQLLQRLQG--QRFDLLF   76 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHh-c--cccceEEcCCCCHHHHHHHHHHhhc--CCCCEEE
Confidence            689999999999999999999999999999998765544322 1  2477889999999999999988754  4799999


Q ss_pred             EcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCC---CCCccchhhHHH
Q 021960          112 NNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGG---LGPHAYTASKHA  188 (305)
Q Consensus       112 ~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~---~~~~~Y~~sKaa  188 (305)
                      ||||......  .++.+.+.+++++.+++|+.+++.+++.+++.+.+ +.++++++||..+..+.   .++..|+++|++
T Consensus        77 ~~ag~~~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~iv~~ss~~g~~~~~~~~~~~~Y~~sK~a  153 (225)
T PRK08177         77 VNAGISGPAH--QSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRP-GQGVLAFMSSQLGSVELPDGGEMPLYKASKAA  153 (225)
T ss_pred             EcCcccCCCC--CCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhh-cCCEEEEEccCccccccCCCCCccchHHHHHH
Confidence            9999864321  45677889999999999999999999999998854 34789999997776543   356789999999


Q ss_pred             HHHHHHHHHHHHCcCCcEEEEEeCCccccccc
Q 021960          189 IVGLTKNAACELGRYGIRVNCISPFGVATSML  220 (305)
Q Consensus       189 ~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~  220 (305)
                      ++.|+++++.|+.+++|+|++|+||+++|++.
T Consensus       154 ~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~~~  185 (225)
T PRK08177        154 LNSMTRSFVAELGEPTLTVLSMHPGWVKTDMG  185 (225)
T ss_pred             HHHHHHHHHHHhhcCCeEEEEEcCCceecCCC
Confidence            99999999999999999999999999999984

>PRK08264 short chain dehydrogenase; Validated

Probab=99.97  E-value=1.2e-28  Score=213.42  Aligned_cols=181  Identities=29%  Similarity=0.347  Sum_probs=160.2

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCC-eEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCC
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGA-KVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGR  106 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~-~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~  106 (305)
                      .+.++++|||||+|+||+++++.|+++|+ +|++++|+......     .+.++.++.+|++|.++++++++.    .++
T Consensus         3 ~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~----~~~   73 (238)
T PRK08264          3 DIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD-----LGPRVVPLQLDVTDPASVAAAAEA----ASD   73 (238)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh-----cCCceEEEEecCCCHHHHHHHHHh----cCC
Confidence            46789999999999999999999999999 99999988654332     234688999999999999887764    367


Q ss_pred             ccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhH
Q 021960          107 LDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASK  186 (305)
Q Consensus       107 id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  186 (305)
                      +|+|||++|.....   ..+.+.+.+++++.+++|+.+++.+++.+.+.+.+++.+++|++||..+..+.++...|+.+|
T Consensus        74 id~vi~~ag~~~~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~~y~~sK  150 (238)
T PRK08264         74 VTILVNNAGIFRTG---SLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVNFPNLGTYSASK  150 (238)
T ss_pred             CCEEEECCCcCCCC---CccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccCCCCchHhHHHH
Confidence            99999999974322   456778999999999999999999999999999888889999999999998888999999999


Q ss_pred             HHHHHHHHHHHHHHCcCCcEEEEEeCCccccccc
Q 021960          187 HAIVGLTKNAACELGRYGIRVNCISPFGVATSML  220 (305)
Q Consensus       187 aa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~  220 (305)
                      ++++++++.++.++.++|++++.++||.++|++.
T Consensus       151 ~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~~  184 (238)
T PRK08264        151 AAAWSLTQALRAELAPQGTRVLGVHPGPIDTDMA  184 (238)
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEeCCccccccc
Confidence            9999999999999998999999999999999874

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.97  E-value=2.7e-29  Score=223.73  Aligned_cols=189  Identities=27%  Similarity=0.334  Sum_probs=163.3

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc----CCCCeEEEEecCCCHHHHHHHHHHHH
Q 021960           26 HRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL----APAPVTFVHCDVSLEEDIENLINSTV  101 (305)
Q Consensus        26 ~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~----~~~~v~~~~~D~~d~~~i~~~~~~~~  101 (305)
                      ..++.+++++||||++|||+++|+.|+++|+.|++..|+.+..+...+.+    .+.++.++.||++|.++|+++++++.
T Consensus        30 ~~~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~  109 (314)
T KOG1208|consen   30 GIDLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFK  109 (314)
T ss_pred             cccCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHH
Confidence            34677899999999999999999999999999999999986655554444    35678899999999999999999999


Q ss_pred             HhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEeccccccc-------
Q 021960          102 SRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVM-------  174 (305)
Q Consensus       102 ~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~-------  174 (305)
                      +..+++|++|||||....      ....+.|.+|..+.+|..|++++++.++|.|+...++|||++||.....       
T Consensus       110 ~~~~~ldvLInNAGV~~~------~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~~~~~~~~~l  183 (314)
T KOG1208|consen  110 KKEGPLDVLINNAGVMAP------PFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILGGGKIDLKDL  183 (314)
T ss_pred             hcCCCccEEEeCcccccC------CcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccccCccchhhc
Confidence            999999999999998754      2266788999999999999999999999999988789999999987511       


Q ss_pred             -C-----CCCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccc-cch
Q 021960          175 -G-----GLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATS-MLV  221 (305)
Q Consensus       175 -~-----~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~-~~~  221 (305)
                       +     .....+|+.||.++..+++.|++.+.. ||.+++++||.+.|+ +.+
T Consensus       184 ~~~~~~~~~~~~~Y~~SKla~~l~~~eL~k~l~~-~V~~~~~hPG~v~t~~l~r  236 (314)
T KOG1208|consen  184 SGEKAKLYSSDAAYALSKLANVLLANELAKRLKK-GVTTYSVHPGVVKTTGLSR  236 (314)
T ss_pred             cchhccCccchhHHHHhHHHHHHHHHHHHHHhhc-CceEEEECCCcccccceec
Confidence             0     111235999999999999999999977 999999999999998 543

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2.8e-28  Score=212.22  Aligned_cols=200  Identities=19%  Similarity=0.143  Sum_probs=152.7

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcC
Q 021960           26 HRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYG  105 (305)
Q Consensus        26 ~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g  105 (305)
                      ...+++|++|||||++|||+++++.|+++|++|++++|+......  ...... ..++.+|++|.+++.+       .++
T Consensus         9 ~~~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~--~~~~~~-~~~~~~D~~~~~~~~~-------~~~   78 (245)
T PRK12367          9 QSTWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSE--SNDESP-NEWIKWECGKEESLDK-------QLA   78 (245)
T ss_pred             HHhhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhh--hhccCC-CeEEEeeCCCHHHHHH-------hcC
Confidence            456789999999999999999999999999999999887622211  111122 3578899999987764       346


Q ss_pred             CccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC---CCCEEEEecccccccCCCCCccc
Q 021960          106 RLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINR---GGGCIISTASVAGVMGGLGPHAY  182 (305)
Q Consensus       106 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~---~~~~iv~isS~~~~~~~~~~~~Y  182 (305)
                      ++|++|||||...       ..+.+.+++++.+++|+.+++++++.++|.|.++   +++.+++.||.++..+ ++...|
T Consensus        79 ~iDilVnnAG~~~-------~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~~-~~~~~Y  150 (245)
T PRK12367         79 SLDVLILNHGINP-------GGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQP-ALSPSY  150 (245)
T ss_pred             CCCEEEECCccCC-------cCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccCC-CCCchh
Confidence            8999999999742       2346789999999999999999999999999763   2334555566655544 466789


Q ss_pred             hhhHHHHHHHH---HHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCC
Q 021960          183 TASKHAIVGLT---KNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGN  259 (305)
Q Consensus       183 ~~sKaa~~~~~---~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (305)
                      ++||+|+..+.   +.++.|..+.+++|+.++||+++|++..                                      
T Consensus       151 ~aSKaal~~~~~l~~~l~~e~~~~~i~v~~~~pg~~~t~~~~--------------------------------------  192 (245)
T PRK12367        151 EISKRLIGQLVSLKKNLLDKNERKKLIIRKLILGPFRSELNP--------------------------------------  192 (245)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcccccEEEEecCCCcccccCc--------------------------------------
Confidence            99999986544   4444455788999999999999988610                                      


Q ss_pred             CCCCCCCHHHHHHHHHHhccCCCC
Q 021960          260 LKGTTLRSKDIAEAALYLASDESR  283 (305)
Q Consensus       260 ~~~~~~~~~dva~~v~~l~s~~~~  283 (305)
                        ...++|+++|+.+++.++....
T Consensus       193 --~~~~~~~~vA~~i~~~~~~~~~  214 (245)
T PRK12367        193 --IGIMSADFVAKQILDQANLGLY  214 (245)
T ss_pred             --cCCCCHHHHHHHHHHHHhcCCc
Confidence              1246899999999999976533

>PRK08017 oxidoreductase; Provisional

Probab=99.97  E-value=2.7e-28  Score=213.35  Aligned_cols=224  Identities=25%  Similarity=0.260  Sum_probs=181.4

Q ss_pred             CEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhc-CCccEE
Q 021960           32 KVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRY-GRLDIL  110 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~-g~id~l  110 (305)
                      |++|||||+|+||+++++.|+++|++|++++|+....+....    ..+.++.+|++|.+++.++++.+.+.. +.+|.+
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~i   78 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNS----LGFTGILLDLDDPESVERAADEVIALTDNRLYGL   78 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHh----CCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEE
Confidence            689999999999999999999999999999998765544332    136788999999999999999887654 679999


Q ss_pred             EEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhHHHHH
Q 021960          111 YNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIV  190 (305)
Q Consensus       111 i~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKaa~~  190 (305)
                      |||+|....    .++.+.+.+++++.+++|+.+++++.+.+++.+.+.+.++||++||..+..+.++...|+++|++++
T Consensus        79 i~~ag~~~~----~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~~~~  154 (256)
T PRK08017         79 FNNAGFGVY----GPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLISTPGRGAYAASKYALE  154 (256)
T ss_pred             EECCCCCCc----cchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCcccccCCCCccHHHHHHHHHH
Confidence            999996432    4566789999999999999999999999999998888889999999999998889999999999999


Q ss_pred             HHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCCHHHH
Q 021960          191 GLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSKDI  270 (305)
Q Consensus       191 ~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv  270 (305)
                      .++++++.++...+++++.|+||.++|++..........           .+...     .      ........+++|+
T Consensus       155 ~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~-----------~~~~~-----~------~~~~~~~~~~~d~  212 (256)
T PRK08017        155 AWSDALRMELRHSGIKVSLIEPGPIRTRFTDNVNQTQSD-----------KPVEN-----P------GIAARFTLGPEAV  212 (256)
T ss_pred             HHHHHHHHHHhhcCCEEEEEeCCCcccchhhcccchhhc-----------cchhh-----h------HHHhhcCCCHHHH
Confidence            999999999999999999999999999875432211000           00000     0      0001235789999


Q ss_pred             HHHHHHhccCCCCce
Q 021960          271 AEAALYLASDESRYV  285 (305)
Q Consensus       271 a~~v~~l~s~~~~~~  285 (305)
                      ++.+..++++....+
T Consensus       213 a~~~~~~~~~~~~~~  227 (256)
T PRK08017        213 VPKLRHALESPKPKL  227 (256)
T ss_pred             HHHHHHHHhCCCCCc
Confidence            999999998765433

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.97  E-value=5.1e-29  Score=204.05  Aligned_cols=161  Identities=42%  Similarity=0.645  Sum_probs=143.7

Q ss_pred             CEEEEecCCCchHHHHHHHHHHcCC-eEEEEecC--cchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhcCC
Q 021960           32 KVAIITGGARGIGEAAVRLFARHGA-KVVIADVE--DTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRYGR  106 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~g~-~vv~~~r~--~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~  106 (305)
                      |++|||||++|||+++++.|+++|. .|++++|+  .+..+.+...+  .+.++.++.+|+++.++++++++++.+.+++
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP   80 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            7899999999999999999999965 67778888  34444443332  3577999999999999999999999999999


Q ss_pred             ccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhH
Q 021960          107 LDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASK  186 (305)
Q Consensus       107 id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  186 (305)
                      +|++|||||....    .++.+.+.+.+++++++|+.+++++.+.++|    ++.++||++||.++..|.+++..|+++|
T Consensus        81 ld~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~----~~~g~iv~~sS~~~~~~~~~~~~Y~ask  152 (167)
T PF00106_consen   81 LDILINNAGIFSD----GSLDDLSEEELERVFRVNLFGPFLLAKALLP----QGGGKIVNISSIAGVRGSPGMSAYSASK  152 (167)
T ss_dssp             ESEEEEECSCTTS----BSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH----HTTEEEEEEEEGGGTSSSTTBHHHHHHH
T ss_pred             ccccccccccccc----cccccccchhhhhccccccceeeeeeehhee----ccccceEEecchhhccCCCCChhHHHHH
Confidence            9999999998763    6788889999999999999999999999999    5589999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHH
Q 021960          187 HAIVGLTKNAACEL  200 (305)
Q Consensus       187 aa~~~~~~~la~e~  200 (305)
                      +|+++|++++++|+
T Consensus       153 aal~~~~~~la~e~  166 (167)
T PF00106_consen  153 AALRGLTQSLAAEL  166 (167)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhc
Confidence            99999999999996

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.96  E-value=3.6e-29  Score=206.03  Aligned_cols=242  Identities=23%  Similarity=0.205  Sum_probs=186.5

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEE--ecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIA--DVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRL  107 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~--~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~i  107 (305)
                      .++++|+||+|+|||...+..+..++-.....  .|.....+.+... .+........|.++..-+.++++..+++.++.
T Consensus         5 ~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~~~~L~v~-~gd~~v~~~g~~~e~~~l~al~e~~r~k~gkr   83 (253)
T KOG1204|consen    5 MRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAELEGLKVA-YGDDFVHVVGDITEEQLLGALREAPRKKGGKR   83 (253)
T ss_pred             cceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhcccccccceEEE-ecCCcceechHHHHHHHHHHHHhhhhhcCCce
Confidence            46788999999999998888888776554333  3333322222111 12345556677777777888888888888999


Q ss_pred             cEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-CCEEEEecccccccCCCCCccchhhH
Q 021960          108 DILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRG-GGCIISTASVAGVMGGLGPHAYTASK  186 (305)
Q Consensus       108 d~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sK  186 (305)
                      |++|||||..+...+. ....-|.++|++.++.|+++.+.+.+.++|.+++++ .+.+|++||.++..|.++|+.||++|
T Consensus        84 ~iiI~NAG~lgdvsk~-~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav~p~~~wa~yc~~K  162 (253)
T KOG1204|consen   84 DIIIHNAGSLGDVSKG-AVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAVRPFSSWAAYCSSK  162 (253)
T ss_pred             eEEEecCCCccchhhc-cCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhhccccHHHHhhhhH
Confidence            9999999988764311 112568899999999999999999999999998875 78999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCC
Q 021960          187 HAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLR  266 (305)
Q Consensus       187 aa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (305)
                      +|++||.+.||.|-. .++++.++.||.+||+|..........+             .+..+.+.+..     ..+++++
T Consensus       163 aAr~m~f~~lA~EEp-~~v~vl~~aPGvvDT~mq~~ir~~~~~~-------------p~~l~~f~el~-----~~~~ll~  223 (253)
T KOG1204|consen  163 AARNMYFMVLASEEP-FDVRVLNYAPGVVDTQMQVCIRETSRMT-------------PADLKMFKELK-----ESGQLLD  223 (253)
T ss_pred             HHHHHHHHHHhhcCc-cceeEEEccCCcccchhHHHHhhccCCC-------------HHHHHHHHHHH-----hcCCcCC
Confidence            999999999999843 6999999999999999977665443222             23333444332     3478999


Q ss_pred             HHHHHHHHHHhccCCCCceeccEEEec
Q 021960          267 SKDIAEAALYLASDESRYVSGHNLVVD  293 (305)
Q Consensus       267 ~~dva~~v~~l~s~~~~~~tG~~i~id  293 (305)
                      |+..++.+..|+.... +.+|+.+...
T Consensus       224 ~~~~a~~l~~L~e~~~-f~sG~~vdy~  249 (253)
T KOG1204|consen  224 PQVTAKVLAKLLEKGD-FVSGQHVDYY  249 (253)
T ss_pred             hhhHHHHHHHHHHhcC-cccccccccc
Confidence            9999999999987654 7899887643

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.96  E-value=1.4e-27  Score=204.76  Aligned_cols=215  Identities=22%  Similarity=0.252  Sum_probs=174.2

Q ss_pred             CEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEEE
Q 021960           32 KVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILY  111 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~li  111 (305)
                      |+++||||+++||++++++|+++|++|++++|+....+.+..    ..+.++.+|++|.++++++++++..  +++|++|
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~----~~~~~~~~D~~~~~~v~~~~~~~~~--~~~d~vi   75 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQA----LGAEALALDVADPASVAGLAWKLDG--EALDAAV   75 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHHh----ccceEEEecCCCHHHHHHHHHHhcC--CCCCEEE
Confidence            689999999999999999999999999999988655443332    2356899999999999998876642  3799999


Q ss_pred             EcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCC---ccchhhHHH
Q 021960          112 NNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGP---HAYTASKHA  188 (305)
Q Consensus       112 ~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~---~~Y~~sKaa  188 (305)
                      ||+|......  ..+.+.+.+++++.+++|+.+++++++.+.+.|.+ ..++++++||..+..+....   ..|+++|++
T Consensus        76 ~~ag~~~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~g~iv~isS~~~~~~~~~~~~~~~Y~~sK~a  152 (222)
T PRK06953         76 YVAGVYGPRT--EGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEA-AGGVLAVLSSRMGSIGDATGTTGWLYRASKAA  152 (222)
T ss_pred             ECCCcccCCC--CCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhc-cCCeEEEEcCcccccccccCCCccccHHhHHH
Confidence            9999764321  34556789999999999999999999999998855 36789999998776653322   359999999


Q ss_pred             HHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCCHH
Q 021960          189 IVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSK  268 (305)
Q Consensus       189 ~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (305)
                      ++++++.++.++  .++++++|+||+++|+|..+                                       ...++++
T Consensus       153 ~~~~~~~~~~~~--~~i~v~~v~Pg~i~t~~~~~---------------------------------------~~~~~~~  191 (222)
T PRK06953        153 LNDALRAASLQA--RHATCIALHPGWVRTDMGGA---------------------------------------QAALDPA  191 (222)
T ss_pred             HHHHHHHHhhhc--cCcEEEEECCCeeecCCCCC---------------------------------------CCCCCHH
Confidence            999999999886  47999999999999998421                                       1234678


Q ss_pred             HHHHHHHHhccCCCCceeccEEEecCCc
Q 021960          269 DIAEAALYLASDESRYVSGHNLVVDGGV  296 (305)
Q Consensus       269 dva~~v~~l~s~~~~~~tG~~i~idgG~  296 (305)
                      +.+..+..+++......+|+++..|++.
T Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (222)
T PRK06953        192 QSVAGMRRVIAQATRRDNGRFFQYDGVE  219 (222)
T ss_pred             HHHHHHHHHHHhcCcccCceEEeeCCcC
Confidence            8888888877766677899999988773

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.96  E-value=1.7e-27  Score=208.47  Aligned_cols=181  Identities=26%  Similarity=0.337  Sum_probs=157.5

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 021960           31 GKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRYGRLD  108 (305)
Q Consensus        31 ~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id  108 (305)
                      +|++|||||+||||+++++.|+++|++|+++.|+......+.+..  .+.++.++.+|++|.++++.+++      +++|
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------~~id   75 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAE------WDVD   75 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhc------CCCC
Confidence            578999999999999999999999999999998765544333222  23458889999999988877653      3799


Q ss_pred             EEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhHHH
Q 021960          109 ILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHA  188 (305)
Q Consensus       109 ~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKaa  188 (305)
                      +||||||....    .++.+.+.+.+++.+++|+.+++.+.+.+++.+.+.+.++||++||..+..+.++...|+++|++
T Consensus        76 ~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~Y~~sK~a  151 (257)
T PRK09291         76 VLLNNAGIGEA----GAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLITGPFTGAYCASKHA  151 (257)
T ss_pred             EEEECCCcCCC----cCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhccCCCCcchhHHHHHH
Confidence            99999997643    56777899999999999999999999999999988877999999999998888888999999999


Q ss_pred             HHHHHHHHHHHHCcCCcEEEEEeCCccccccch
Q 021960          189 IVGLTKNAACELGRYGIRVNCISPFGVATSMLV  221 (305)
Q Consensus       189 ~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~  221 (305)
                      ++.+++.++.++.+.||++++|+||++.|++..
T Consensus       152 ~~~~~~~l~~~~~~~gi~~~~v~pg~~~t~~~~  184 (257)
T PRK09291        152 LEAIAEAMHAELKPFGIQVATVNPGPYLTGFND  184 (257)
T ss_pred             HHHHHHHHHHHHHhcCcEEEEEecCcccccchh
Confidence            999999999999889999999999999998753

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.96  E-value=6.1e-27  Score=201.00  Aligned_cols=220  Identities=26%  Similarity=0.273  Sum_probs=176.6

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEE
Q 021960           31 GKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDIL  110 (305)
Q Consensus        31 ~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~l  110 (305)
                      .|++|||||+|+||+++++.|+++ ++|++++|+....+.+.+..  ..+.++.+|++|.++++++++.+    +++|+|
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~----~~id~v   75 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAEL--PGATPFPVDLTDPEAIAAAVEQL----GRLDVL   75 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHh--ccceEEecCCCCHHHHHHHHHhc----CCCCEE
Confidence            478999999999999999999999 99999999865544333222  24788999999999998877654    479999


Q ss_pred             EEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhHHHHH
Q 021960          111 YNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIV  190 (305)
Q Consensus       111 i~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKaa~~  190 (305)
                      ||++|....    ..+.+.+.+++.+.+++|+.+++.+++.+++.+.++ .+++|++||..+..+.++...|+.+|++++
T Consensus        76 i~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~v~~ss~~~~~~~~~~~~y~~~K~a~~  150 (227)
T PRK08219         76 VHNAGVADL----GPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAA-HGHVVFINSGAGLRANPGWGSYAASKFALR  150 (227)
T ss_pred             EECCCcCCC----CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCeEEEEcchHhcCcCCCCchHHHHHHHHH
Confidence            999997543    445677889999999999999999999999988665 578999999999888888999999999999


Q ss_pred             HHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCCHHHH
Q 021960          191 GLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSKDI  270 (305)
Q Consensus       191 ~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv  270 (305)
                      .+++.++.++... +++++|+||.++|++.......                        .    ....+.+++++++|+
T Consensus       151 ~~~~~~~~~~~~~-i~~~~i~pg~~~~~~~~~~~~~------------------------~----~~~~~~~~~~~~~dv  201 (227)
T PRK08219        151 ALADALREEEPGN-VRVTSVHPGRTDTDMQRGLVAQ------------------------E----GGEYDPERYLRPETV  201 (227)
T ss_pred             HHHHHHHHHhcCC-ceEEEEecCCccchHhhhhhhh------------------------h----ccccCCCCCCCHHHH
Confidence            9999999988766 9999999999988764322110                        0    001223567899999


Q ss_pred             HHHHHHhccCCCCceeccEEEecC
Q 021960          271 AEAALYLASDESRYVSGHNLVVDG  294 (305)
Q Consensus       271 a~~v~~l~s~~~~~~tG~~i~idg  294 (305)
                      ++.++++++...   .|.++.++.
T Consensus       202 a~~~~~~l~~~~---~~~~~~~~~  222 (227)
T PRK08219        202 AKAVRFAVDAPP---DAHITEVVV  222 (227)
T ss_pred             HHHHHHHHcCCC---CCccceEEE
Confidence            999999998653   466665554

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.96  E-value=2.7e-27  Score=204.10  Aligned_cols=188  Identities=29%  Similarity=0.331  Sum_probs=173.3

Q ss_pred             CEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcC----CCCeEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 021960           32 KVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLA----PAPVTFVHCDVSLEEDIENLINSTVSRYGRL  107 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~----~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~i  107 (305)
                      +.++|||+|+|||+++|..+..+|++|.++.|+......+.+.+.    ..+|.+..+|+.|.+++..+++++.+..+.+
T Consensus        34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~~  113 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGPI  113 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCCc
Confidence            799999999999999999999999999999999888777666552    2347899999999999999999999999999


Q ss_pred             cEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-CCEEEEecccccccCCCCCccchhhH
Q 021960          108 DILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRG-GGCIISTASVAGVMGGLGPHAYTASK  186 (305)
Q Consensus       108 d~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sK  186 (305)
                      |.+|||||....    +.+.+.+.+.+++.+++|..++++..++.++.|++.. .|+|+.+||..+..+..+.++|+++|
T Consensus       114 d~l~~cAG~~v~----g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~~i~GysaYs~sK  189 (331)
T KOG1210|consen  114 DNLFCCAGVAVP----GLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAMLGIYGYSAYSPSK  189 (331)
T ss_pred             ceEEEecCcccc----cccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhcCcccccccccHH
Confidence            999999998755    6788999999999999999999999999999998876 68999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhc
Q 021960          187 HAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNA  223 (305)
Q Consensus       187 aa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~  223 (305)
                      +|+.+++..+++|+.++||+|..+.|+.++||.+...
T Consensus       190 ~alrgLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE~E  226 (331)
T KOG1210|consen  190 FALRGLAEALRQELIKYGVHVTLYYPPDTLTPGFERE  226 (331)
T ss_pred             HHHHHHHHHHHHHHhhcceEEEEEcCCCCCCCccccc
Confidence            9999999999999999999999999999999976543

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.94  E-value=7.7e-25  Score=201.89  Aligned_cols=198  Identities=19%  Similarity=0.174  Sum_probs=151.7

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRL  107 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~i  107 (305)
                      .+++|+++||||+||||++++++|+++|++|++++|+.+........ ....+..+.+|++|.+++.+.+       +++
T Consensus       175 sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~-~~~~v~~v~~Dvsd~~~v~~~l-------~~I  246 (406)
T PRK07424        175 SLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEING-EDLPVKTLHWQVGQEAALAELL-------EKV  246 (406)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhh-cCCCeEEEEeeCCCHHHHHHHh-------CCC
Confidence            56799999999999999999999999999999998876543322111 1224678899999998876543       579


Q ss_pred             cEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCC----CEEEEecccccccCCCCCccch
Q 021960          108 DILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGG----GCIISTASVAGVMGGLGPHAYT  183 (305)
Q Consensus       108 d~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~----~~iv~isS~~~~~~~~~~~~Y~  183 (305)
                      |++|||||...       ..+.+.+++++.+++|+.+++.+++.++|.|.+++.    +.+|++|+ +. ...+..+.|+
T Consensus       247 DiLInnAGi~~-------~~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ss-a~-~~~~~~~~Y~  317 (406)
T PRK07424        247 DILIINHGINV-------HGERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSE-AE-VNPAFSPLYE  317 (406)
T ss_pred             CEEEECCCcCC-------CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEcc-cc-ccCCCchHHH
Confidence            99999999742       235688999999999999999999999999976542    34555554 33 3334567899


Q ss_pred             hhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCC
Q 021960          184 ASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGT  263 (305)
Q Consensus       184 ~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (305)
                      +||+|+..++. ++++  ..++.+..+.||++.|++.                                       + ..
T Consensus       318 ASKaAl~~l~~-l~~~--~~~~~I~~i~~gp~~t~~~---------------------------------------~-~~  354 (406)
T PRK07424        318 LSKRALGDLVT-LRRL--DAPCVVRKLILGPFKSNLN---------------------------------------P-IG  354 (406)
T ss_pred             HHHHHHHHHHH-HHHh--CCCCceEEEEeCCCcCCCC---------------------------------------c-CC
Confidence            99999999974 4444  2467788899999988761                                       1 12


Q ss_pred             CCCHHHHHHHHHHhccCCCCce
Q 021960          264 TLRSKDIAEAALYLASDESRYV  285 (305)
Q Consensus       264 ~~~~~dva~~v~~l~s~~~~~~  285 (305)
                      .++||++|+.+++.++...+.+
T Consensus       355 ~~spe~vA~~il~~i~~~~~~i  376 (406)
T PRK07424        355 VMSADWVAKQILKLAKRDFRNI  376 (406)
T ss_pred             CCCHHHHHHHHHHHHHCCCCEE
Confidence            4689999999999998876543

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.92  E-value=4.1e-23  Score=222.60  Aligned_cols=180  Identities=20%  Similarity=0.210  Sum_probs=153.2

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHc-CCeEEEEecCcch-----------------------------------------
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARH-GAKVVIADVEDTL-----------------------------------------   67 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~-g~~vv~~~r~~~~-----------------------------------------   67 (305)
                      +++++|||||++|||+++++.|+++ |++|++++|+...                                         
T Consensus      1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813      1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence            5899999999999999999999998 6999999988210                                         


Q ss_pred             ---hhh----Hhh-hcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHH
Q 021960           68 ---GSV----LAS-TLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMR  139 (305)
Q Consensus        68 ---~~~----~~~-~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~  139 (305)
                         ...    +.. ...+.++.++.||++|.++++++++++.+. ++||+||||||....    ..+.+.+.++|++.++
T Consensus      2076 ~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~-g~IDgVVhnAGv~~~----~~i~~~t~e~f~~v~~ 2150 (2582)
T TIGR02813      2076 VLSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKT-LQITGIIHGAGVLAD----KHIQDKTLEEFNAVYG 2150 (2582)
T ss_pred             cchhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHh-CCCcEEEECCccCCC----CCcccCCHHHHHHHHH
Confidence               000    000 012456889999999999999999999877 689999999998644    5678899999999999


Q ss_pred             HHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCcccccc
Q 021960          140 VNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSM  219 (305)
Q Consensus       140 ~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~  219 (305)
                      +|+.|.+++++++.+.+    .++||++||.+++.+.+++..|+++|++++.+++.++.++.  +++|++|+||+++|+|
T Consensus      2151 ~nv~G~~~Ll~al~~~~----~~~IV~~SSvag~~G~~gqs~YaaAkaaL~~la~~la~~~~--~irV~sI~wG~wdtgm 2224 (2582)
T TIGR02813      2151 TKVDGLLSLLAALNAEN----IKLLALFSSAAGFYGNTGQSDYAMSNDILNKAALQLKALNP--SAKVMSFNWGPWDGGM 2224 (2582)
T ss_pred             HHHHHHHHHHHHHHHhC----CCeEEEEechhhcCCCCCcHHHHHHHHHHHHHHHHHHHHcC--CcEEEEEECCeecCCc
Confidence            99999999988886643    35799999999999999999999999999999999999864  5999999999999988


Q ss_pred             c
Q 021960          220 L  220 (305)
Q Consensus       220 ~  220 (305)
                      .
T Consensus      2225 ~ 2225 (2582)
T TIGR02813      2225 V 2225 (2582)
T ss_pred             c
Confidence            4

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.90  E-value=1.6e-22  Score=165.95  Aligned_cols=173  Identities=25%  Similarity=0.319  Sum_probs=143.2

Q ss_pred             CEEEEecCCCchHHHHHHHHHHcCC-eEEEEecCcchhhhHh---hhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhcC
Q 021960           32 KVAIITGGARGIGEAAVRLFARHGA-KVVIADVEDTLGSVLA---STL--APAPVTFVHCDVSLEEDIENLINSTVSRYG  105 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~g~-~vv~~~r~~~~~~~~~---~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g  105 (305)
                      |+++||||+++||+++++.|+++|+ .|++++|+....+...   +.+  .+.++.++.+|+++.++++++++++.+.++
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARLG   80 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            5789999999999999999999997 5777777654332211   111  244678899999999999999999988889


Q ss_pred             CccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhh
Q 021960          106 RLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTAS  185 (305)
Q Consensus       106 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  185 (305)
                      ++|+||||+|....    ..+.+.+.+++++.+++|+.+++.+.+.+.+    .+.++++++||..+..+.++...|+++
T Consensus        81 ~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~ii~~ss~~~~~~~~~~~~y~~s  152 (180)
T smart00822       81 PLRGVIHAAGVLDD----GLLANLTPERFAAVLAPKVDGAWNLHELTRD----LPLDFFVLFSSVAGVLGNPGQANYAAA  152 (180)
T ss_pred             CeeEEEEccccCCc----cccccCCHHHHHHhhchHhHHHHHHHHHhcc----CCcceEEEEccHHHhcCCCCchhhHHH
Confidence            99999999997543    4566778899999999999999998888733    456899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCcCCcEEEEEeCCccc
Q 021960          186 KHAIVGLTKNAACELGRYGIRVNCISPFGVA  216 (305)
Q Consensus       186 Kaa~~~~~~~la~e~~~~~i~v~~v~PG~v~  216 (305)
                      |++++.+++.++.    .++.+.++.||++.
T Consensus       153 k~~~~~~~~~~~~----~~~~~~~~~~g~~~  179 (180)
T smart00822      153 NAFLDALAAHRRA----RGLPATSINWGAWA  179 (180)
T ss_pred             HHHHHHHHHHHHh----cCCceEEEeecccc
Confidence            9999999977654    47889999999874

It uses NADPH to reduce the keto group to a hydroxy group.

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.90  E-value=7.8e-22  Score=178.77  Aligned_cols=168  Identities=19%  Similarity=0.213  Sum_probs=133.8

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHcC--CeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCC
Q 021960           29 LEGKVAIITGGARGIGEAAVRLFARHG--AKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGR  106 (305)
Q Consensus        29 l~~k~vlVtGas~giG~~ia~~l~~~g--~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~  106 (305)
                      +++|++|||||+|+||+++++.|+++|  +.|++++|+......+.......++.++.+|++|.+++.++++       .
T Consensus         2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~-------~   74 (324)
T TIGR03589         2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRALR-------G   74 (324)
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHh-------c
Confidence            468999999999999999999999986  6898888875543333333333468899999999999887764       5


Q ss_pred             ccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhH
Q 021960          107 LDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASK  186 (305)
Q Consensus       107 id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  186 (305)
                      +|+|||+||....     +..+.+   .++.+++|+.++.++++++.+    .+.++||++||.....|   ...|+++|
T Consensus        75 iD~Vih~Ag~~~~-----~~~~~~---~~~~~~~Nv~g~~~ll~aa~~----~~~~~iV~~SS~~~~~p---~~~Y~~sK  139 (324)
T TIGR03589        75 VDYVVHAAALKQV-----PAAEYN---PFECIRTNINGAQNVIDAAID----NGVKRVVALSTDKAANP---INLYGATK  139 (324)
T ss_pred             CCEEEECcccCCC-----chhhcC---HHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEeCCCCCCC---CCHHHHHH
Confidence            8999999996421     112222   346899999999999988875    45579999999765443   46799999


Q ss_pred             HHHHHHHHHHHHHHCcCCcEEEEEeCCccccc
Q 021960          187 HAIVGLTKNAACELGRYGIRVNCISPFGVATS  218 (305)
Q Consensus       187 aa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~  218 (305)
                      ++.+.+++.++.+++..|+++++++||.+..+
T Consensus       140 ~~~E~l~~~~~~~~~~~gi~~~~lR~g~v~G~  171 (324)
T TIGR03589       140 LASDKLFVAANNISGSKGTRFSVVRYGNVVGS  171 (324)
T ss_pred             HHHHHHHHHHHhhccccCcEEEEEeecceeCC
Confidence            99999999998888888999999999999875

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.90  E-value=8.2e-22  Score=186.27  Aligned_cols=222  Identities=14%  Similarity=0.145  Sum_probs=158.7

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcC-----------CCCeEEEEecCCCHHHHH
Q 021960           26 HRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLA-----------PAPVTFVHCDVSLEEDIE   94 (305)
Q Consensus        26 ~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~-----------~~~v~~~~~D~~d~~~i~   94 (305)
                      ....+||++|||||+|+||++++++|+++|++|+++.|+....+.+...+.           ..++.++.+|++|.+++.
T Consensus        75 ~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~  154 (576)
T PLN03209         75 LDTKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIG  154 (576)
T ss_pred             cccCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHH
Confidence            335578999999999999999999999999999999998766544332210           135889999999998876


Q ss_pred             HHHHHHHHhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccc-
Q 021960           95 NLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGV-  173 (305)
Q Consensus        95 ~~~~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~-  173 (305)
                      +.+       +.+|+||||+|....          ...++...+++|+.+..++++++..    .+.++||++||.++. 
T Consensus       155 ~aL-------ggiDiVVn~AG~~~~----------~v~d~~~~~~VN~~Gt~nLl~Aa~~----agVgRIV~VSSiga~~  213 (576)
T PLN03209        155 PAL-------GNASVVICCIGASEK----------EVFDVTGPYRIDYLATKNLVDAATV----AKVNHFILVTSLGTNK  213 (576)
T ss_pred             HHh-------cCCCEEEEccccccc----------cccchhhHHHHHHHHHHHHHHHHHH----hCCCEEEEEccchhcc
Confidence            543       579999999986421          1124667788999998888887754    456799999998764 


Q ss_pred             cCCCCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHH
Q 021960          174 MGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEF  253 (305)
Q Consensus       174 ~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (305)
                      .+.+.. .|. +|.++..+.+.+..++...||+++.|+||+++|++.... ..                  ..+..   .
T Consensus       214 ~g~p~~-~~~-sk~~~~~~KraaE~~L~~sGIrvTIVRPG~L~tp~d~~~-~t------------------~~v~~---~  269 (576)
T PLN03209        214 VGFPAA-ILN-LFWGVLCWKRKAEEALIASGLPYTIVRPGGMERPTDAYK-ET------------------HNLTL---S  269 (576)
T ss_pred             cCcccc-chh-hHHHHHHHHHHHHHHHHHcCCCEEEEECCeecCCccccc-cc------------------cceee---c
Confidence            332222 244 788888888888888988999999999999998763211 00                  00000   0


Q ss_pred             HhhcCCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCC
Q 021960          254 VSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGG  295 (305)
Q Consensus       254 ~~~~~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG  295 (305)
                        ..+.+.++.++.+|||+.++|++++... -.+.++.+-++
T Consensus       270 --~~d~~~gr~isreDVA~vVvfLasd~~a-s~~kvvevi~~  308 (576)
T PLN03209        270 --EEDTLFGGQVSNLQVAELMACMAKNRRL-SYCKVVEVIAE  308 (576)
T ss_pred             --cccccCCCccCHHHHHHHHHHHHcCchh-ccceEEEEEeC
Confidence              0013456778999999999999995532 23455554443

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.87  E-value=3.1e-20  Score=169.98  Aligned_cols=235  Identities=14%  Similarity=0.031  Sum_probs=162.0

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc-CCCCeEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 021960           29 LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL-APAPVTFVHCDVSLEEDIENLINSTVSRYGRL  107 (305)
Q Consensus        29 l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~-~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~i  107 (305)
                      ++||++|||||+|+||+++++.|+++|++|++++|+........... ...++.++.+|++|.+++.++++..     ++
T Consensus         2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~   76 (349)
T TIGR02622         2 WQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEF-----KP   76 (349)
T ss_pred             cCCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhc-----CC
Confidence            46799999999999999999999999999999988765433222111 1235778899999999999888754     58


Q ss_pred             cEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEeccccccc------------C
Q 021960          108 DILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVM------------G  175 (305)
Q Consensus       108 d~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~------------~  175 (305)
                      |+|||+||....        ..+.+++...+++|+.+++++++++.. .  ...+++|++||...+.            +
T Consensus        77 d~vih~A~~~~~--------~~~~~~~~~~~~~N~~g~~~ll~a~~~-~--~~~~~iv~~SS~~vyg~~~~~~~~~e~~~  145 (349)
T TIGR02622        77 EIVFHLAAQPLV--------RKSYADPLETFETNVMGTVNLLEAIRA-I--GSVKAVVNVTSDKCYRNDEWVWGYRETDP  145 (349)
T ss_pred             CEEEECCccccc--------ccchhCHHHHHHHhHHHHHHHHHHHHh-c--CCCCEEEEEechhhhCCCCCCCCCccCCC
Confidence            999999995321        234456778899999999999988743 1  2246899999964331            1


Q ss_pred             CCCCccchhhHHHHHHHHHHHHHHHCc----CCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHH
Q 021960          176 GLGPHAYTASKHAIVGLTKNAACELGR----YGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKME  251 (305)
Q Consensus       176 ~~~~~~Y~~sKaa~~~~~~~la~e~~~----~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (305)
                      ..+...|+.+|.+.+.+++.++.++.+    ++++++.+.|+.+..+.....  .            ..+|  ..+....
T Consensus       146 ~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~--~------------~~~~--~~~~~~~  209 (349)
T TIGR02622       146 LGGHDPYSSSKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGGDWAE--D------------RLIP--DVIRAFS  209 (349)
T ss_pred             CCCCCcchhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCCcchh--h------------hhhH--HHHHHHh
Confidence            234568999999999999999988754    489999999999987631100  0            0000  1111110


Q ss_pred             H--HHh-hcCCCCCCCCCHHHHHHHHHHhccCCCC--ceeccEEEecCC
Q 021960          252 E--FVS-GLGNLKGTTLRSKDIAEAALYLASDESR--YVSGHNLVVDGG  295 (305)
Q Consensus       252 ~--~~~-~~~~~~~~~~~~~dva~~v~~l~s~~~~--~~tG~~i~idgG  295 (305)
                      .  ... .-+.....++-.+|++++++.++.....  ...|+++++.+|
T Consensus       210 ~g~~~~~~~g~~~rd~i~v~D~a~a~~~~~~~~~~~~~~~~~~yni~s~  258 (349)
T TIGR02622       210 SNKIVIIRNPDATRPWQHVLEPLSGYLLLAEKLFTGQAEFAGAWNFGPR  258 (349)
T ss_pred             cCCCeEECCCCcccceeeHHHHHHHHHHHHHHHhhcCccccceeeeCCC
Confidence            0  000 0023345667899999999887753211  123678998765

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.87  E-value=2.3e-20  Score=169.12  Aligned_cols=226  Identities=17%  Similarity=0.165  Sum_probs=156.7

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc----CCCCeEEEEecCCCHHHHHHHHHHHHHhcC
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL----APAPVTFVHCDVSLEEDIENLINSTVSRYG  105 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~----~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g  105 (305)
                      ++|++|||||+|+||+++++.|+++|++|+++.|+...........    ...++.++.+|++|.++++++++       
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   76 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAID-------   76 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHc-------
Confidence            4789999999999999999999999999988877755432221111    12468899999999998888775       


Q ss_pred             CccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCC--------
Q 021960          106 RLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGL--------  177 (305)
Q Consensus       106 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~--------  177 (305)
                      .+|+||||||....        ..+.+.+.+.+++|+.+++++++++.+.+   +.++||++||.+++.+..        
T Consensus        77 ~~d~vih~A~~~~~--------~~~~~~~~~~~~~n~~g~~~ll~a~~~~~---~~~~iv~~SS~~~~~~~~~~~~~~~~  145 (325)
T PLN02989         77 GCETVFHTASPVAI--------TVKTDPQVELINPAVNGTINVLRTCTKVS---SVKRVILTSSMAAVLAPETKLGPNDV  145 (325)
T ss_pred             CCCEEEEeCCCCCC--------CCCCChHHHHHHHHHHHHHHHHHHHHHcC---CceEEEEecchhheecCCccCCCCCc
Confidence            58999999996421        12334577899999999999999887643   346899999987653311        


Q ss_pred             --------------CCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCc
Q 021960          178 --------------GPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPS  243 (305)
Q Consensus       178 --------------~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (305)
                                    ....|+.+|.+.+.+++.++++   .++.+..+.|+.+..|......               +...
T Consensus       146 ~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~vyGp~~~~~~---------------~~~~  207 (325)
T PLN02989        146 VDETFFTNPSFAEERKQWYVLSKTLAEDAAWRFAKD---NEIDLIVLNPGLVTGPILQPTL---------------NFSV  207 (325)
T ss_pred             cCcCCCCchhHhcccccchHHHHHHHHHHHHHHHHH---cCCeEEEEcCCceeCCCCCCCC---------------CchH
Confidence                          0246999999999999988766   4799999999999887532100               0000


Q ss_pred             HHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCC
Q 021960          244 QKEVRKMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGG  295 (305)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG  295 (305)
                       ..+..+..-........+.++.++|+|++++.++....   .+..++++|+
T Consensus       208 -~~i~~~~~~~~~~~~~~r~~i~v~Dva~a~~~~l~~~~---~~~~~ni~~~  255 (325)
T PLN02989        208 -AVIVELMKGKNPFNTTHHRFVDVRDVALAHVKALETPS---ANGRYIIDGP  255 (325)
T ss_pred             -HHHHHHHcCCCCCCCcCcCeeEHHHHHHHHHHHhcCcc---cCceEEEecC
Confidence             01111100000011122467789999999998887542   2346788654

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=99.87  E-value=3.4e-21  Score=161.07  Aligned_cols=195  Identities=22%  Similarity=0.281  Sum_probs=159.1

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCC-----eEEEEecCcchhhhHhhhc----C--CCCeEEEEecCCCHHHHHHHHH
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGA-----KVVIADVEDTLGSVLASTL----A--PAPVTFVHCDVSLEEDIENLIN   98 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~-----~vv~~~r~~~~~~~~~~~~----~--~~~v~~~~~D~~d~~~i~~~~~   98 (305)
                      ..|++||||+++|||.++|++|.+...     .+++..|+.++.+.....+    +  ..++.++.+|+++..|+.++.+
T Consensus         2 ~RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~   81 (341)
T KOG1478|consen    2 MRKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASK   81 (341)
T ss_pred             CceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHH
Confidence            458999999999999999999987643     3666788876655443332    3  4578999999999999999999


Q ss_pred             HHHHhcCCccEEEEcCCCCCCCCCC----------Cccc-------------CCCHHHHHHHHHHHhHHHHHHHHHHHHH
Q 021960           99 STVSRYGRLDILYNNAGVLGNQRKH----------KSII-------------DFDADEFDNVMRVNVKGMALGIKHAARV  155 (305)
Q Consensus        99 ~~~~~~g~id~li~nag~~~~~~~~----------~~~~-------------~~~~~~~~~~~~~n~~~~~~l~~~~~~~  155 (305)
                      .+.++|.++|.+..|||........          +++.             ..+.+++.++|+.|++|+|++.+.+.|+
T Consensus        82 di~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~pl  161 (341)
T KOG1478|consen   82 DIKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEPL  161 (341)
T ss_pred             HHHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhhH
Confidence            9999999999999999986432100          0000             1256789999999999999999999999


Q ss_pred             HHcCCCCEEEEecccccccC---------CCCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcc
Q 021960          156 MINRGGGCIISTASVAGVMG---------GLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAW  224 (305)
Q Consensus       156 ~~~~~~~~iv~isS~~~~~~---------~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~  224 (305)
                      +-.+....+|++||..+...         .++..+|..||.+.+-+.-.+.+.+.+.|+...+++||...|.++..+.
T Consensus       162 l~~~~~~~lvwtSS~~a~kk~lsleD~q~~kg~~pY~sSKrl~DlLh~A~~~~~~~~g~~qyvv~pg~~tt~~~~~~l  239 (341)
T KOG1478|consen  162 LCHSDNPQLVWTSSRMARKKNLSLEDFQHSKGKEPYSSSKRLTDLLHVALNRNFKPLGINQYVVQPGIFTTNSFSEYL  239 (341)
T ss_pred             hhcCCCCeEEEEeecccccccCCHHHHhhhcCCCCcchhHHHHHHHHHHHhccccccchhhhcccCceeecchhhhhh
Confidence            98777779999999887542         4577899999999999999999998888999999999999998866543

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.86  E-value=8.4e-21  Score=157.75  Aligned_cols=170  Identities=28%  Similarity=0.431  Sum_probs=128.2

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCC-eEEEEecCcc-h--hhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhcCC
Q 021960           33 VAIITGGARGIGEAAVRLFARHGA-KVVIADVEDT-L--GSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRYGR  106 (305)
Q Consensus        33 ~vlVtGas~giG~~ia~~l~~~g~-~vv~~~r~~~-~--~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~  106 (305)
                      ++|||||.||||..+++.|+++|. ++++++|+.. .  .....+.+  .+.++.++.||++|.++++++++++.+++++
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~   81 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFGP   81 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS-
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccCC
Confidence            789999999999999999999976 6899999822 1  11111111  4678999999999999999999999999999


Q ss_pred             ccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhH
Q 021960          107 LDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASK  186 (305)
Q Consensus       107 id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  186 (305)
                      |+.|||+||....    ..+.+.+.++++..+..++.+..++.+.+.+    .....+|++||+++..+.+++..|+++.
T Consensus        82 i~gVih~ag~~~~----~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~----~~l~~~i~~SSis~~~G~~gq~~YaaAN  153 (181)
T PF08659_consen   82 IDGVIHAAGVLAD----APIQDQTPDEFDAVLAPKVRGLWNLHEALEN----RPLDFFILFSSISSLLGGPGQSAYAAAN  153 (181)
T ss_dssp             EEEEEE-----------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTT----TTTSEEEEEEEHHHHTT-TTBHHHHHHH
T ss_pred             cceeeeeeeeecc----cccccCCHHHHHHHHhhhhhHHHHHHHHhhc----CCCCeEEEECChhHhccCcchHhHHHHH
Confidence            9999999998754    6788899999999999999998887766543    5567899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCcCCcEEEEEeCCc
Q 021960          187 HAIVGLTKNAACELGRYGIRVNCISPFG  214 (305)
Q Consensus       187 aa~~~~~~~la~e~~~~~i~v~~v~PG~  214 (305)
                      +.++.|++..+..    +..+.+|+-|.
T Consensus       154 ~~lda~a~~~~~~----g~~~~sI~wg~  177 (181)
T PF08659_consen  154 AFLDALARQRRSR----GLPAVSINWGA  177 (181)
T ss_dssp             HHHHHHHHHHHHT----TSEEEEEEE-E
T ss_pred             HHHHHHHHHHHhC----CCCEEEEEccc
Confidence            9999999876543    56677777554

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=99.84  E-value=2.8e-19  Score=161.28  Aligned_cols=187  Identities=14%  Similarity=0.079  Sum_probs=138.5

Q ss_pred             CCCEEEEecCCCchHHH--HHHHHHHcCCeEEEEecCcchhh------------hHhhhc--CCCCeEEEEecCCCHHHH
Q 021960           30 EGKVAIITGGARGIGEA--AVRLFARHGAKVVIADVEDTLGS------------VLASTL--APAPVTFVHCDVSLEEDI   93 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~--ia~~l~~~g~~vv~~~r~~~~~~------------~~~~~~--~~~~v~~~~~D~~d~~~i   93 (305)
                      .+|++||||+++|||.+  +|+.| ++|++|+++++......            .+.+..  .+..+..+.||+++.+++
T Consensus        40 ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~v  118 (398)
T PRK13656         40 GPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEIK  118 (398)
T ss_pred             CCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHH
Confidence            47999999999999999  89999 99999888875321111            111111  234577899999999999


Q ss_pred             HHHHHHHHHhcCCccEEEEcCCCCCCCC-----------------CCCc-------------ccCCCHHHHHHHHHHHhH
Q 021960           94 ENLINSTVSRYGRLDILYNNAGVLGNQR-----------------KHKS-------------IIDFDADEFDNVMRVNVK  143 (305)
Q Consensus        94 ~~~~~~~~~~~g~id~li~nag~~~~~~-----------------~~~~-------------~~~~~~~~~~~~~~~n~~  143 (305)
                      +++++++.+.+|+||+||||+|......                 ....             +...+.++++..+.+.-.
T Consensus       119 ~~lie~I~e~~G~IDiLVnSaA~~~r~~p~~g~~~~s~lKpi~~~~~~~~~d~~~~~i~~~s~~~~~~~ei~~Tv~vMgg  198 (398)
T PRK13656        119 QKVIELIKQDLGQVDLVVYSLASPRRTDPKTGEVYRSVLKPIGEPYTGKTLDTDKDVIIEVTVEPATEEEIADTVKVMGG  198 (398)
T ss_pred             HHHHHHHHHhcCCCCEEEECCccCCCCCcccCceeecccccccccccCCcccccccceeEEEEeeCCHHHHHHHHHhhcc
Confidence            9999999999999999999999763321                 0011             112345555555444322


Q ss_pred             -HHHHHHHHH--HHHHHcCCCCEEEEecccccccCCCCC--ccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccc
Q 021960          144 -GMALGIKHA--ARVMINRGGGCIISTASVAGVMGGLGP--HAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATS  218 (305)
Q Consensus       144 -~~~~l~~~~--~~~~~~~~~~~iv~isS~~~~~~~~~~--~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~  218 (305)
                       .-..+++++  .++|  ..++++|-+|...+....|.+  ..-+.+|++|+..++.|+.++++.|+++|++.+|++.|.
T Consensus       199 edw~~Wi~al~~a~ll--a~g~~~va~TY~G~~~t~p~Y~~g~mG~AKa~LE~~~r~La~~L~~~giran~i~~g~~~T~  276 (398)
T PRK13656        199 EDWELWIDALDEAGVL--AEGAKTVAYSYIGPELTHPIYWDGTIGKAKKDLDRTALALNEKLAAKGGDAYVSVLKAVVTQ  276 (398)
T ss_pred             chHHHHHHHHHhcccc--cCCcEEEEEecCCcceeecccCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccch
Confidence             112334443  3334  457899999999888877766  478999999999999999999999999999999999997


Q ss_pred             c
Q 021960          219 M  219 (305)
Q Consensus       219 ~  219 (305)
                      -
T Consensus       277 A  277 (398)
T PRK13656        277 A  277 (398)
T ss_pred             h
Confidence            4

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.84  E-value=6e-19  Score=159.66  Aligned_cols=223  Identities=20%  Similarity=0.201  Sum_probs=153.4

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc----CCCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           29 LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL----APAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        29 l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~----~~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      ..||++|||||+|+||++++++|+++|++|+++.|+....+......    ...++.++.+|++|.++++++++      
T Consensus         3 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   76 (322)
T PLN02986          3 GGGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIE------   76 (322)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHh------
Confidence            35789999999999999999999999999998877655433222211    12468899999999988888775      


Q ss_pred             CCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEeccccccc-CCC------
Q 021960          105 GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVM-GGL------  177 (305)
Q Consensus       105 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~-~~~------  177 (305)
                       .+|+|||+|+....     ..    .+...+.+++|+.++.++++.+...   .+..+||++||.++.. +.+      
T Consensus        77 -~~d~vih~A~~~~~-----~~----~~~~~~~~~~nv~gt~~ll~~~~~~---~~v~rvV~~SS~~~~~~~~~~~~~~~  143 (322)
T PLN02986         77 -GCDAVFHTASPVFF-----TV----KDPQTELIDPALKGTINVLNTCKET---PSVKRVILTSSTAAVLFRQPPIEAND  143 (322)
T ss_pred             -CCCEEEEeCCCcCC-----CC----CCchhhhhHHHHHHHHHHHHHHHhc---CCccEEEEecchhheecCCccCCCCC
Confidence             48999999986421     00    1123467899999999888876431   2346899999986532 110      


Q ss_pred             ---------------CCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCC
Q 021960          178 ---------------GPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIP  242 (305)
Q Consensus       178 ---------------~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~  242 (305)
                                     ....|+.+|.+.+.+++.+.++   +++.+++++|+.+.+|...... .              ..
T Consensus       144 ~~~E~~~~~p~~~~~~~~~Y~~sK~~aE~~~~~~~~~---~~~~~~~lrp~~v~Gp~~~~~~-~--------------~~  205 (322)
T PLN02986        144 VVDETFFSDPSLCRETKNWYPLSKILAENAAWEFAKD---NGIDMVVLNPGFICGPLLQPTL-N--------------FS  205 (322)
T ss_pred             CcCcccCCChHHhhccccchHHHHHHHHHHHHHHHHH---hCCeEEEEcccceeCCCCCCCC-C--------------cc
Confidence                           1356999999999999888766   3799999999999988632100 0              00


Q ss_pred             cHHHHHHHHHHHhh---cCCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCC
Q 021960          243 SQKEVRKMEEFVSG---LGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGG  295 (305)
Q Consensus       243 ~~~~~~~~~~~~~~---~~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG  295 (305)
                       ..   .+..+...   ++.....++.++|+|++++.++....   .+..++++|+
T Consensus       206 -~~---~~~~~~~g~~~~~~~~~~~v~v~Dva~a~~~al~~~~---~~~~yni~~~  254 (322)
T PLN02986        206 -VE---LIVDFINGKNLFNNRFYRFVDVRDVALAHIKALETPS---ANGRYIIDGP  254 (322)
T ss_pred             -HH---HHHHHHcCCCCCCCcCcceeEHHHHHHHHHHHhcCcc---cCCcEEEecC
Confidence             01   11111111   11223467899999999999887542   2347888554

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.83  E-value=6.4e-19  Score=160.69  Aligned_cols=234  Identities=18%  Similarity=0.043  Sum_probs=152.3

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchh--hhHhhhc-----CCCCeEEEEecCCCHHHHHHHHHHH
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLG--SVLASTL-----APAPVTFVHCDVSLEEDIENLINST  100 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~--~~~~~~~-----~~~~v~~~~~D~~d~~~i~~~~~~~  100 (305)
                      +.++|++|||||+|+||+++++.|+++|++|++++|+....  ..+....     .+.++.++.+|++|.+++.++++..
T Consensus         3 ~~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   82 (340)
T PLN02653          3 DPPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDI   82 (340)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHc
Confidence            56789999999999999999999999999999988764321  1111110     1245889999999999999888764


Q ss_pred             HHhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCC-CEEEEecccccccC----
Q 021960          101 VSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGG-GCIISTASVAGVMG----  175 (305)
Q Consensus       101 ~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~iv~isS~~~~~~----  175 (305)
                           .+|+|||+|+.....        ...+.....+++|+.++.++++.+.+...+++. .++|++||.+.+-.    
T Consensus        83 -----~~d~Vih~A~~~~~~--------~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~~  149 (340)
T PLN02653         83 -----KPDEVYNLAAQSHVA--------VSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPPP  149 (340)
T ss_pred             -----CCCEEEECCcccchh--------hhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCCC
Confidence                 599999999974321        123445677899999999999998876543211 26888887532211    


Q ss_pred             ------CCCCccchhhHHHHHHHHHHHHHHHCc---CCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHH
Q 021960          176 ------GLGPHAYTASKHAIVGLTKNAACELGR---YGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKE  246 (305)
Q Consensus       176 ------~~~~~~Y~~sKaa~~~~~~~la~e~~~---~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (305)
                            ......|+.||.+.+.+++.++.+++-   .++.++.+.|+.-.+-+ ...+                   ...
T Consensus       150 ~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~-~~~~-------------------~~~  209 (340)
T PLN02653        150 QSETTPFHPRSPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFV-TRKI-------------------TRA  209 (340)
T ss_pred             CCCCCCCCCCChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCcccc-hhHH-------------------HHH
Confidence                  113568999999999999999888642   12333444454322110 0000                   000


Q ss_pred             HHHHHHH-----HhhcCCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          247 VRKMEEF-----VSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       247 ~~~~~~~-----~~~~~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      +..+..-     ..+-+.....++..+|+|++++.++...    .+..+++.+|...
T Consensus       210 ~~~~~~~~~~~~~~g~g~~~rd~i~v~D~a~a~~~~~~~~----~~~~yni~~g~~~  262 (340)
T PLN02653        210 VGRIKVGLQKKLFLGNLDASRDWGFAGDYVEAMWLMLQQE----KPDDYVVATEESH  262 (340)
T ss_pred             HHHHHcCCCCceEeCCCcceecceeHHHHHHHHHHHHhcC----CCCcEEecCCCce
Confidence            0010000     0000123346789999999999988754    2456888877543

>PLN02572 UDP-sulfoquinovose synthase

Probab=99.83  E-value=9e-19  Score=164.81  Aligned_cols=183  Identities=15%  Similarity=0.037  Sum_probs=134.8

Q ss_pred             CCCCCCCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchh-----------------hhHhh--hcCCCCeE
Q 021960           21 DAPPSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLG-----------------SVLAS--TLAPAPVT   81 (305)
Q Consensus        21 ~~~~~~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~-----------------~~~~~--~~~~~~v~   81 (305)
                      ..|.....++++++|||||+|+||+++++.|+++|++|+++++.....                 +.+..  ...+.++.
T Consensus        37 ~~~~~~~~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~  116 (442)
T PLN02572         37 SAPGSSSSSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIE  116 (442)
T ss_pred             CCCCCCccccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcce
Confidence            345555678899999999999999999999999999999986421100                 00100  01123588


Q ss_pred             EEEecCCCHHHHHHHHHHHHHhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCC
Q 021960           82 FVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGG  161 (305)
Q Consensus        82 ~~~~D~~d~~~i~~~~~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~  161 (305)
                      ++.+|++|.++++++++..     ++|+|||+|+...     ......+.++++..+++|+.+++++++.+...   ...
T Consensus       117 ~v~~Dl~d~~~v~~~l~~~-----~~D~ViHlAa~~~-----~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~---gv~  183 (442)
T PLN02572        117 LYVGDICDFEFLSEAFKSF-----EPDAVVHFGEQRS-----APYSMIDRSRAVFTQHNNVIGTLNVLFAIKEF---APD  183 (442)
T ss_pred             EEECCCCCHHHHHHHHHhC-----CCCEEEECCCccc-----ChhhhcChhhHHHHHHHHHHHHHHHHHHHHHh---CCC
Confidence            9999999999999888754     6999999997532     12233455667788899999999999887553   112


Q ss_pred             CEEEEeccccccc------------------------CCCCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCcccc
Q 021960          162 GCIISTASVAGVM------------------------GGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVAT  217 (305)
Q Consensus       162 ~~iv~isS~~~~~------------------------~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T  217 (305)
                      .++|++||...+-                        +......|+.+|.+.+.+++.++..   +|+.+..+.|+.+..
T Consensus       184 ~~~V~~SS~~vYG~~~~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~---~gl~~v~lR~~~vyG  260 (442)
T PLN02572        184 CHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA---WGIRATDLNQGVVYG  260 (442)
T ss_pred             ccEEEEecceecCCCCCCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHh---cCCCEEEEecccccC
Confidence            4799999875431                        1112357999999999999887765   589999999999988


Q ss_pred             cc
Q 021960          218 SM  219 (305)
Q Consensus       218 ~~  219 (305)
                      +.
T Consensus       261 p~  262 (442)
T PLN02572        261 VR  262 (442)
T ss_pred             CC
Confidence            75

>PLN02650 dihydroflavonol-4-reductase

Probab=99.82  E-value=2.5e-18  Score=157.52  Aligned_cols=212  Identities=18%  Similarity=0.165  Sum_probs=146.9

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc--C--CCCeEEEEecCCCHHHHHHHHHHHHHhcC
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL--A--PAPVTFVHCDVSLEEDIENLINSTVSRYG  105 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~--~--~~~v~~~~~D~~d~~~i~~~~~~~~~~~g  105 (305)
                      +.|++|||||+|+||+++++.|+++|++|+++.|+...........  .  ..++.++.+|++|.++++++++       
T Consensus         4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~-------   76 (351)
T PLN02650          4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIR-------   76 (351)
T ss_pred             CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHh-------
Confidence            5689999999999999999999999999998888754433322211  1  1357889999999988887765       


Q ss_pred             CccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCC----C----
Q 021960          106 RLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGG----L----  177 (305)
Q Consensus       106 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~----~----  177 (305)
                      .+|+|||+|+....       ...  +..++.+++|+.++.++++++.+..   ...+||++||.....+.    +    
T Consensus        77 ~~d~ViH~A~~~~~-------~~~--~~~~~~~~~Nv~gt~~ll~aa~~~~---~~~r~v~~SS~~~~~~~~~~~~~~~E  144 (351)
T PLN02650         77 GCTGVFHVATPMDF-------ESK--DPENEVIKPTVNGMLSIMKACAKAK---TVRRIVFTSSAGTVNVEEHQKPVYDE  144 (351)
T ss_pred             CCCEEEEeCCCCCC-------CCC--CchhhhhhHHHHHHHHHHHHHHhcC---CceEEEEecchhhcccCCCCCCccCc
Confidence            48999999985421       111  1235678999999999999886531   13589999997543210    0    


Q ss_pred             --------------CCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCc
Q 021960          178 --------------GPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPS  243 (305)
Q Consensus       178 --------------~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (305)
                                    ....|+.||.+.+.+++.++.+   ++++++.++|+.+.+|......                 +.
T Consensus       145 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gi~~~ilRp~~v~Gp~~~~~~-----------------~~  204 (351)
T PLN02650        145 DCWSDLDFCRRKKMTGWMYFVSKTLAEKAAWKYAAE---NGLDFISIIPTLVVGPFISTSM-----------------PP  204 (351)
T ss_pred             ccCCchhhhhccccccchHHHHHHHHHHHHHHHHHH---cCCeEEEECCCceECCCCCCCC-----------------Cc
Confidence                          1137999999999999998876   5899999999999998532110                 00


Q ss_pred             HHHHHHHHHHHhh---c-CCCCCCCCCHHHHHHHHHHhccCC
Q 021960          244 QKEVRKMEEFVSG---L-GNLKGTTLRSKDIAEAALYLASDE  281 (305)
Q Consensus       244 ~~~~~~~~~~~~~---~-~~~~~~~~~~~dva~~v~~l~s~~  281 (305)
                       .....+......   . ....+.++.++|+++++++++...
T Consensus       205 -~~~~~~~~~~~~~~~~~~~~~r~~v~V~Dva~a~~~~l~~~  245 (351)
T PLN02650        205 -SLITALSLITGNEAHYSIIKQGQFVHLDDLCNAHIFLFEHP  245 (351)
T ss_pred             -cHHHHHHHhcCCccccCcCCCcceeeHHHHHHHHHHHhcCc
Confidence             000010000000   0 012357889999999999998754

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=99.82  E-value=3.7e-18  Score=156.55  Aligned_cols=231  Identities=17%  Similarity=0.115  Sum_probs=156.0

Q ss_pred             CEEEEecCCCchHHHHHHHHHHcCCeEE-EEecCcchhh--hHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 021960           32 KVAIITGGARGIGEAAVRLFARHGAKVV-IADVEDTLGS--VLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLD  108 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~g~~vv-~~~r~~~~~~--~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id  108 (305)
                      +++|||||+|+||+++++.|+++|+.++ ++++......  .........++.++.+|++|.++++++++..     .+|
T Consensus         2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~D   76 (355)
T PRK10217          2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEH-----QPD   76 (355)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhhhhcccCCceEEEECCCcChHHHHHHHhhc-----CCC
Confidence            5799999999999999999999998754 4555432111  1111112235788999999999998887752     599


Q ss_pred             EEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHH---c--CCCCEEEEeccccccc---------
Q 021960          109 ILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMI---N--RGGGCIISTASVAGVM---------  174 (305)
Q Consensus       109 ~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~--~~~~~iv~isS~~~~~---------  174 (305)
                      +|||+||....        +.+.+++++.+++|+.++.++++.+.+.+.   .  .+..++|++||.+.+-         
T Consensus        77 ~Vih~A~~~~~--------~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~  148 (355)
T PRK10217         77 CVMHLAAESHV--------DRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFF  148 (355)
T ss_pred             EEEECCcccCc--------chhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCc
Confidence            99999986422        123466788999999999999999876532   1  2235899999864321         


Q ss_pred             ----CCCCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHH
Q 021960          175 ----GGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKM  250 (305)
Q Consensus       175 ----~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (305)
                          +..+.+.|+.||.+.+.+++.+++++   ++.+..+.|+.+..|...   ..   .          . ....+...
T Consensus       149 ~E~~~~~p~s~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~v~Gp~~~---~~---~----------~-~~~~~~~~  208 (355)
T PRK10217        149 TETTPYAPSSPYSASKASSDHLVRAWLRTY---GLPTLITNCSNNYGPYHF---PE---K----------L-IPLMILNA  208 (355)
T ss_pred             CCCCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCeEEEeeeeeeCCCCC---cc---c----------H-HHHHHHHH
Confidence                22345689999999999999988774   678888889888766421   00   0          0 00000100


Q ss_pred             HH--HHh--hcCCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          251 EE--FVS--GLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       251 ~~--~~~--~~~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      ..  ...  .-+.....++.++|+++++..++...   ..|.++++.+|...
T Consensus       209 ~~~~~~~~~g~g~~~~~~i~v~D~a~a~~~~~~~~---~~~~~yni~~~~~~  257 (355)
T PRK10217        209 LAGKPLPVYGNGQQIRDWLYVEDHARALYCVATTG---KVGETYNIGGHNER  257 (355)
T ss_pred             hcCCCceEeCCCCeeeCcCcHHHHHHHHHHHHhcC---CCCCeEEeCCCCcc
Confidence            00  000  00122446789999999998888653   25788999888643

>PLN02214 cinnamoyl-CoA reductase

Probab=99.81  E-value=4.4e-18  Score=155.36  Aligned_cols=221  Identities=17%  Similarity=0.156  Sum_probs=150.4

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhh--Hhhhc-CCCCeEEEEecCCCHHHHHHHHHHHHHhcC
Q 021960           29 LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSV--LASTL-APAPVTFVHCDVSLEEDIENLINSTVSRYG  105 (305)
Q Consensus        29 l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~--~~~~~-~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g  105 (305)
                      ++++++|||||+|+||+++++.|+++|++|+++.|+......  ..... ...++.++.+|++|.++++++++       
T Consensus         8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   80 (342)
T PLN02214          8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAID-------   80 (342)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHh-------
Confidence            357899999999999999999999999999999887543211  11111 12358889999999998888775       


Q ss_pred             CccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCC--------
Q 021960          106 RLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGL--------  177 (305)
Q Consensus       106 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~--------  177 (305)
                      .+|+|||+|+...             +++.+.+++|+.++.++++++.+    .+..+||++||.++..+.+        
T Consensus        81 ~~d~Vih~A~~~~-------------~~~~~~~~~nv~gt~~ll~aa~~----~~v~r~V~~SS~~avyg~~~~~~~~~~  143 (342)
T PLN02214         81 GCDGVFHTASPVT-------------DDPEQMVEPAVNGAKFVINAAAE----AKVKRVVITSSIGAVYMDPNRDPEAVV  143 (342)
T ss_pred             cCCEEEEecCCCC-------------CCHHHHHHHHHHHHHHHHHHHHh----cCCCEEEEeccceeeeccCCCCCCccc
Confidence            5899999998531             12457789999999998888754    3456899999976443210        


Q ss_pred             -------------CCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcH
Q 021960          178 -------------GPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQ  244 (305)
Q Consensus       178 -------------~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (305)
                                   ....|+.+|.+.+.+++.++.+   +++.+..++|+.+..|........   .            ..
T Consensus       144 ~E~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~---~g~~~v~lRp~~vyGp~~~~~~~~---~------------~~  205 (342)
T PLN02214        144 DESCWSDLDFCKNTKNWYCYGKMVAEQAAWETAKE---KGVDLVVLNPVLVLGPPLQPTINA---S------------LY  205 (342)
T ss_pred             CcccCCChhhccccccHHHHHHHHHHHHHHHHHHH---cCCcEEEEeCCceECCCCCCCCCc---h------------HH
Confidence                         1246999999999999888776   479999999999988742210000   0            00


Q ss_pred             HHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecC
Q 021960          245 KEVRKMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDG  294 (305)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idg  294 (305)
                      ..+..+.............++.++|+|++++.++....   .|..+++.+
T Consensus       206 ~~~~~~~g~~~~~~~~~~~~i~V~Dva~a~~~al~~~~---~~g~yn~~~  252 (342)
T PLN02214        206 HVLKYLTGSAKTYANLTQAYVDVRDVALAHVLVYEAPS---ASGRYLLAE  252 (342)
T ss_pred             HHHHHHcCCcccCCCCCcCeeEHHHHHHHHHHHHhCcc---cCCcEEEec
Confidence            00000000000011223467899999999999886542   233555544

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=99.81  E-value=5.5e-18  Score=149.45  Aligned_cols=228  Identities=19%  Similarity=0.148  Sum_probs=161.4

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhH--hhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhcC
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVL--ASTL--APAPVTFVHCDVSLEEDIENLINSTVSRYG  105 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~--~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g  105 (305)
                      .+++|+||||||.||+++++.|+++||+|+.+-|+.......  ...+  ...+...+..|+.|++++++.++       
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~-------   77 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAID-------   77 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHh-------
Confidence            678999999999999999999999999999999987663331  2222  24568999999999999999887       


Q ss_pred             CccEEEEcCCCCCCCCCCCcccCCCHHHHH-HHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCC-C------
Q 021960          106 RLDILYNNAGVLGNQRKHKSIIDFDADEFD-NVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGG-L------  177 (305)
Q Consensus       106 ~id~li~nag~~~~~~~~~~~~~~~~~~~~-~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~-~------  177 (305)
                      ..|+|+|.|......       ..+   .+ +.++..+.|+.+.++++...   +.-.|||++||.++.... +      
T Consensus        78 gcdgVfH~Asp~~~~-------~~~---~e~~li~pav~Gt~nVL~ac~~~---~sVkrvV~TSS~aAv~~~~~~~~~~~  144 (327)
T KOG1502|consen   78 GCDGVFHTASPVDFD-------LED---PEKELIDPAVKGTKNVLEACKKT---KSVKRVVYTSSTAAVRYNGPNIGENS  144 (327)
T ss_pred             CCCEEEEeCccCCCC-------CCC---cHHhhhhHHHHHHHHHHHHHhcc---CCcceEEEeccHHHhccCCcCCCCCc
Confidence            599999999865321       111   33 68899999999988888653   224689999999988653 1      


Q ss_pred             -----CC----------ccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCC
Q 021960          178 -----GP----------HAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIP  242 (305)
Q Consensus       178 -----~~----------~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~  242 (305)
                           .|          ..|+.+|..-+.-+..++.|   .++...+|+||.|..|........               +
T Consensus       145 vvdE~~wsd~~~~~~~~~~Y~~sK~lAEkaAw~fa~e---~~~~lv~inP~lV~GP~l~~~l~~---------------s  206 (327)
T KOG1502|consen  145 VVDEESWSDLDFCRCKKLWYALSKTLAEKAAWEFAKE---NGLDLVTINPGLVFGPGLQPSLNS---------------S  206 (327)
T ss_pred             ccccccCCcHHHHHhhHHHHHHHHHHHHHHHHHHHHh---CCccEEEecCCceECCCcccccch---------------h
Confidence                 11          25777777666666666655   479999999999999875441111               0


Q ss_pred             cHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCcc
Q 021960          243 SQKEVRKMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT  297 (305)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~  297 (305)
                      ..-.++.+......+....-.+++++|+|.+.++++..+..  .|+.|......+
T Consensus       207 ~~~~l~~i~G~~~~~~n~~~~~VdVrDVA~AHv~a~E~~~a--~GRyic~~~~~~  259 (327)
T KOG1502|consen  207 LNALLKLIKGLAETYPNFWLAFVDVRDVALAHVLALEKPSA--KGRYICVGEVVS  259 (327)
T ss_pred             HHHHHHHHhcccccCCCCceeeEeHHHHHHHHHHHHcCccc--CceEEEecCccc
Confidence            11111111111222223333468999999999999987643  477777766654

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.81  E-value=1.3e-17  Score=152.92  Aligned_cols=175  Identities=18%  Similarity=0.165  Sum_probs=128.8

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc-CCCCeEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 021960           29 LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL-APAPVTFVHCDVSLEEDIENLINSTVSRYGRL  107 (305)
Q Consensus        29 l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~-~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~i  107 (305)
                      -+++++|||||+|+||++++++|+++|++|++++|+......+.... .+.++.++.+|++|.+++.++++       .+
T Consensus         8 ~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~   80 (353)
T PLN02896          8 SATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVK-------GC   80 (353)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHc-------CC
Confidence            36789999999999999999999999999999888754433322222 23468899999999988887764       48


Q ss_pred             cEEEEcCCCCCCCCCCCcccCCCHHHH--HHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCC---------
Q 021960          108 DILYNNAGVLGNQRKHKSIIDFDADEF--DNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGG---------  176 (305)
Q Consensus       108 d~li~nag~~~~~~~~~~~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~---------  176 (305)
                      |+|||+|+.....   ......+.+.+  ...++.|+.++.++++++.+.   .+.++||++||.+.+...         
T Consensus        81 d~Vih~A~~~~~~---~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~~~  154 (353)
T PLN02896         81 DGVFHVAASMEFD---VSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKS---KTVKRVVFTSSISTLTAKDSNGRWRAV  154 (353)
T ss_pred             CEEEECCccccCC---ccccccchhhhhhHHhHHHHHHHHHHHHHHHHhc---CCccEEEEEechhhccccccCCCCCCc
Confidence            9999999975431   11111233332  456778889998888887653   124689999997654210         


Q ss_pred             ----------------CCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCcccccc
Q 021960          177 ----------------LGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSM  219 (305)
Q Consensus       177 ----------------~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~  219 (305)
                                      +....|+.||.+.+.+++.++++   .++.+..+.|+.+..|.
T Consensus       155 ~~E~~~~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~vyGp~  210 (353)
T PLN02896        155 VDETCQTPIDHVWNTKASGWVYVLSKLLTEEAAFKYAKE---NGIDLVSVITTTVAGPF  210 (353)
T ss_pred             cCcccCCcHHHhhccCCCCccHHHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCC
Confidence                            01237999999999999988776   47999999999998885

>PLN02583 cinnamoyl-CoA reductase

Probab=99.81  E-value=6.8e-18  Score=151.17  Aligned_cols=217  Identities=12%  Similarity=-0.004  Sum_probs=147.7

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhh--hHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhcC
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGS--VLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRYG  105 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~--~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g  105 (305)
                      .+|++|||||+|+||++++++|+++|++|+++.|+.....  .....+  .+.++.++.+|++|.+++.+++.       
T Consensus         5 ~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~-------   77 (297)
T PLN02583          5 SSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALK-------   77 (297)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHc-------
Confidence            4689999999999999999999999999999888532211  111111  13458889999999988876653       


Q ss_pred             CccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCC-C-------
Q 021960          106 RLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGG-L-------  177 (305)
Q Consensus       106 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~-~-------  177 (305)
                      ..|.++|.++....         .+ .++++.+++|+.+++++++++.+.+   +.++||++||.++.... +       
T Consensus        78 ~~d~v~~~~~~~~~---------~~-~~~~~~~~~nv~gt~~ll~aa~~~~---~v~riV~~SS~~a~~~~~~~~~~~~~  144 (297)
T PLN02583         78 GCSGLFCCFDPPSD---------YP-SYDEKMVDVEVRAAHNVLEACAQTD---TIEKVVFTSSLTAVIWRDDNISTQKD  144 (297)
T ss_pred             CCCEEEEeCccCCc---------cc-ccHHHHHHHHHHHHHHHHHHHHhcC---CccEEEEecchHheecccccCCCCCC
Confidence            57889987654211         11 2357889999999999999987643   24689999998764311 0       


Q ss_pred             ----CC----------ccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCc
Q 021960          178 ----GP----------HAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPS  243 (305)
Q Consensus       178 ----~~----------~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (305)
                          .+          ..|+.||...+.+++.++++   .++.+++|+|+.+.++........          .....  
T Consensus       145 ~~E~~~~~~~~~~~~~~~Y~~sK~~aE~~~~~~~~~---~gi~~v~lrp~~v~Gp~~~~~~~~----------~~~~~--  209 (297)
T PLN02583        145 VDERSWSDQNFCRKFKLWHALAKTLSEKTAWALAMD---RGVNMVSINAGLLMGPSLTQHNPY----------LKGAA--  209 (297)
T ss_pred             CCcccCCCHHHHhhcccHHHHHHHHHHHHHHHHHHH---hCCcEEEEcCCcccCCCCCCchhh----------hcCCc--
Confidence                01          15999999999998887665   489999999999988753211000          00000  


Q ss_pred             HHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCC
Q 021960          244 QKEVRKMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGG  295 (305)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG  295 (305)
                                 .......-.++.++|+|++++..+....  -.| .+.+-++
T Consensus       210 -----------~~~~~~~~~~v~V~Dva~a~~~al~~~~--~~~-r~~~~~~  247 (297)
T PLN02583        210 -----------QMYENGVLVTVDVNFLVDAHIRAFEDVS--SYG-RYLCFNH  247 (297)
T ss_pred             -----------ccCcccCcceEEHHHHHHHHHHHhcCcc--cCC-cEEEecC
Confidence                       0000111246799999999999987542  234 4555544

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.80  E-value=7.9e-18  Score=152.16  Aligned_cols=214  Identities=19%  Similarity=0.193  Sum_probs=144.5

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhh--c--CCCCeEEEEecCCCHHHHHHHHHHHHHhcC
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLAST--L--APAPVTFVHCDVSLEEDIENLINSTVSRYG  105 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~--~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g  105 (305)
                      ++|++|||||+|+||++++++|+++|++|+++.|+..........  .  ...++.++.+|++|.++++++++       
T Consensus         3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   75 (322)
T PLN02662          3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVD-------   75 (322)
T ss_pred             CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHc-------
Confidence            468999999999999999999999999999888865432211111  1  12468899999999888877765       


Q ss_pred             CccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccc-c-CC-------
Q 021960          106 RLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGV-M-GG-------  176 (305)
Q Consensus       106 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~-~-~~-------  176 (305)
                      .+|+|||+|+....     ..  .+  ...+.+++|+.++.++++++...   .+..+||++||.++. . +.       
T Consensus        76 ~~d~Vih~A~~~~~-----~~--~~--~~~~~~~~nv~gt~~ll~a~~~~---~~~~~~v~~SS~~~~~y~~~~~~~~~~  143 (322)
T PLN02662         76 GCEGVFHTASPFYH-----DV--TD--PQAELIDPAVKGTLNVLRSCAKV---PSVKRVVVTSSMAAVAYNGKPLTPDVV  143 (322)
T ss_pred             CCCEEEEeCCcccC-----CC--CC--hHHHHHHHHHHHHHHHHHHHHhC---CCCCEEEEccCHHHhcCCCcCCCCCCc
Confidence            58999999986421     00  01  12467899999999988887542   134689999997642 1 11       


Q ss_pred             --------C-----CCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCc
Q 021960          177 --------L-----GPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPS  243 (305)
Q Consensus       177 --------~-----~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (305)
                              +     ....|+.+|.+.+.+++.+.++   .++++..++|+.+.+|.......               ...
T Consensus       144 ~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lRp~~v~Gp~~~~~~~---------------~~~  205 (322)
T PLN02662        144 VDETWFSDPAFCEESKLWYVLSKTLAEEAAWKFAKE---NGIDMVTINPAMVIGPLLQPTLN---------------TSA  205 (322)
T ss_pred             CCcccCCChhHhhcccchHHHHHHHHHHHHHHHHHH---cCCcEEEEeCCcccCCCCCCCCC---------------chH
Confidence                    0     0147999999999998887665   47999999999999885321100               000


Q ss_pred             HHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHHhccCC
Q 021960          244 QKEVRKMEEFVSGLGNLKGTTLRSKDIAEAALYLASDE  281 (305)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~  281 (305)
                       ..+.....-..........++.++|+|++++.++...
T Consensus       206 -~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~  242 (322)
T PLN02662        206 -EAILNLINGAQTFPNASYRWVDVRDVANAHIQAFEIP  242 (322)
T ss_pred             -HHHHHHhcCCccCCCCCcCeEEHHHHHHHHHHHhcCc
Confidence             0011110000011122345789999999999988754

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.80  E-value=2.1e-17  Score=150.64  Aligned_cols=170  Identities=20%  Similarity=0.198  Sum_probs=127.2

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHh--hhcC-CCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLA--STLA-PAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~--~~~~-~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      .++++++|||||+|+||+++++.|+++|++|+++.|+........  ..+. ..++.++.+|++|.+++.++++      
T Consensus         6 ~~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------   79 (338)
T PLN00198          6 PTGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEAPIA------   79 (338)
T ss_pred             CCCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHHHHh------
Confidence            345789999999999999999999999999988877654322111  1111 1258889999999988887664      


Q ss_pred             CCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCC--------
Q 021960          105 GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGG--------  176 (305)
Q Consensus       105 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~--------  176 (305)
                       ++|+|||+|+....       .  ..+.....+++|+.++.++++++.+.   .+.++||++||.+.+...        
T Consensus        80 -~~d~vih~A~~~~~-------~--~~~~~~~~~~~nv~g~~~ll~a~~~~---~~~~~~v~~SS~~~~g~~~~~~~~~~  146 (338)
T PLN00198         80 -GCDLVFHVATPVNF-------A--SEDPENDMIKPAIQGVHNVLKACAKA---KSVKRVILTSSAAAVSINKLSGTGLV  146 (338)
T ss_pred             -cCCEEEEeCCCCcc-------C--CCChHHHHHHHHHHHHHHHHHHHHhc---CCccEEEEeecceeeeccCCCCCCce
Confidence             58999999985311       1  11223456899999999999887652   234699999997654311        


Q ss_pred             ----------------CCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCcccccc
Q 021960          177 ----------------LGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSM  219 (305)
Q Consensus       177 ----------------~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~  219 (305)
                                      +....|+.||.+.+.+++.++.+   +++.+..+.|+.+..|.
T Consensus       147 ~~E~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~~R~~~vyGp~  202 (338)
T PLN00198        147 MNEKNWTDVEFLTSEKPPTWGYPASKTLAEKAAWKFAEE---NNIDLITVIPTLMAGPS  202 (338)
T ss_pred             eccccCCchhhhhhcCCccchhHHHHHHHHHHHHHHHHh---cCceEEEEeCCceECCC
Confidence                            12456999999999999988776   47999999999998875

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.80  E-value=2.6e-17  Score=150.37  Aligned_cols=231  Identities=14%  Similarity=0.044  Sum_probs=144.9

Q ss_pred             CEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcch--hhhHhh---hc---CCCCeEEEEecCCCHHHHHHHHHHHHHh
Q 021960           32 KVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTL--GSVLAS---TL---APAPVTFVHCDVSLEEDIENLINSTVSR  103 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~--~~~~~~---~~---~~~~v~~~~~D~~d~~~i~~~~~~~~~~  103 (305)
                      |++|||||+|+||+++++.|+++|++|++++|+...  .+....   ..   .+.++.++.+|++|.+++.++++..   
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~---   77 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEI---   77 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhC---
Confidence            589999999999999999999999999999887532  111111   11   1235889999999999998888754   


Q ss_pred             cCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEeccccccc---------
Q 021960          104 YGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVM---------  174 (305)
Q Consensus       104 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~---------  174 (305)
                        ++|+|||+|+.....        ...+.....+++|+.++.++++++.+.-. ....++|++||.+.+-         
T Consensus        78 --~~d~ViH~Aa~~~~~--------~~~~~~~~~~~~n~~gt~~ll~a~~~~~~-~~~~~~v~~SS~~vyg~~~~~~~~E  146 (343)
T TIGR01472        78 --KPTEIYNLAAQSHVK--------VSFEIPEYTADVDGIGTLRLLEAVRTLGL-IKSVKFYQASTSELYGKVQEIPQNE  146 (343)
T ss_pred             --CCCEEEECCcccccc--------hhhhChHHHHHHHHHHHHHHHHHHHHhCC-CcCeeEEEeccHHhhCCCCCCCCCC
Confidence              589999999975321        12223356778899999999988866311 1124799999864331         


Q ss_pred             --CCCCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchh-cccCCCCCchhhhhhccCCCcHHHHHHHH
Q 021960          175 --GGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVN-AWRNSGDGEEEDECMNFGIPSQKEVRKME  251 (305)
Q Consensus       175 --~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (305)
                        +....+.|+.||.+.+.+++.++.+++   +.+....+..+..+.... ....               .....+..+.
T Consensus       147 ~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~---~~~~~~~~~~~~gp~~~~~~~~~---------------~~~~~~~~~~  208 (343)
T TIGR01472       147 TTPFYPRSPYAAAKLYAHWITVNYREAYG---LFAVNGILFNHESPRRGENFVTR---------------KITRAAAKIK  208 (343)
T ss_pred             CCCCCCCChhHHHHHHHHHHHHHHHHHhC---CceEEEeecccCCCCCCccccch---------------HHHHHHHHHH
Confidence              112456899999999999999988753   322222221111111000 0000               0000111110


Q ss_pred             HH-----HhhcCCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          252 EF-----VSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       252 ~~-----~~~~~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      .-     .-+-+.....++.++|++++++.++....    +..+++.+|...
T Consensus       209 ~~~~~~~~~g~g~~~rd~i~V~D~a~a~~~~~~~~~----~~~yni~~g~~~  256 (343)
T TIGR01472       209 LGLQEKLYLGNLDAKRDWGHAKDYVEAMWLMLQQDK----PDDYVIATGETH  256 (343)
T ss_pred             cCCCCceeeCCCccccCceeHHHHHHHHHHHHhcCC----CccEEecCCCce
Confidence            00     00112345577899999999988886542    346888777543

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PRK06720 hypothetical protein; Provisional

Probab=99.79  E-value=5.4e-18  Score=138.97  Aligned_cols=143  Identities=24%  Similarity=0.431  Sum_probs=111.3

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHh
Q 021960           26 HRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSR  103 (305)
Q Consensus        26 ~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~  103 (305)
                      .+.+++|+++||||++|||+++++.|+++|++|++++|+.+..+...+.+  .+.++.++.+|++|.++++++++++.+.
T Consensus        11 ~~~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~   90 (169)
T PRK06720         11 KMKLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNA   90 (169)
T ss_pred             ccccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            34578999999999999999999999999999999998866544332322  2345778899999999999999999999


Q ss_pred             cCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC-------CCCEEEEeccccccc
Q 021960          104 YGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINR-------GGGCIISTASVAGVM  174 (305)
Q Consensus       104 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-------~~~~iv~isS~~~~~  174 (305)
                      +|++|++|||||.....   ..+.+.+.++ ++  .+|+.+.+..++.+.+.|.++       +.||+..|||.++..
T Consensus        91 ~G~iDilVnnAG~~~~~---~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (169)
T PRK06720         91 FSRIDMLFQNAGLYKID---SIFSRQQEND-SN--VLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFGIIGTKGQSF  162 (169)
T ss_pred             cCCCCEEEECCCcCCCC---CcccccchhH-hh--ceeccHHHHHHHHHHHHHHhcCCEEEeecCceeeEeccccccc
Confidence            99999999999976432   3444445444 44  667777778888888887654       457888888876543

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.78  E-value=4.8e-17  Score=146.25  Aligned_cols=223  Identities=17%  Similarity=0.088  Sum_probs=150.8

Q ss_pred             EEEEecCCCchHHHHHHHHHHcC--CeEEEEecCcc--hhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 021960           33 VAIITGGARGIGEAAVRLFARHG--AKVVIADVEDT--LGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLD  108 (305)
Q Consensus        33 ~vlVtGas~giG~~ia~~l~~~g--~~vv~~~r~~~--~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id  108 (305)
                      +++||||+|+||.+++++|+++|  ++|++++|...  ..+.+.......++.++.+|++|.+++.++++..     ++|
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d   75 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLEDNPRYRFVKGDIGDRELVSRLFTEH-----QPD   75 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhccCCCcEEEEcCCcCHHHHHHHHhhc-----CCC
Confidence            48999999999999999999987  78888776321  1111222222335788999999999999887653     599


Q ss_pred             EEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccC------------C
Q 021960          109 ILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMG------------G  176 (305)
Q Consensus       109 ~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~------------~  176 (305)
                      +|||+|+....        +.+.+..+..+++|+.++.++++.+.+.+   .+.++|++||...+-.            .
T Consensus        76 ~vi~~a~~~~~--------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~Ss~~v~g~~~~~~~~~e~~~~  144 (317)
T TIGR01181        76 AVVHFAAESHV--------DRSISGPAAFIETNVVGTYTLLEAVRKYW---HEFRFHHISTDEVYGDLEKGDAFTETTPL  144 (317)
T ss_pred             EEEEcccccCc--------hhhhhCHHHHHHHHHHHHHHHHHHHHhcC---CCceEEEeeccceeCCCCCCCCcCCCCCC
Confidence            99999986432        12334567789999999988888775532   2347999998543221            1


Q ss_pred             CCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhh
Q 021960          177 LGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSG  256 (305)
Q Consensus       177 ~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (305)
                      .....|+.+|.+.+.+++.++.+.   ++++..+.|+.+..+.....  .                  -....+......
T Consensus       145 ~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~i~G~~~~~~--~------------------~~~~~~~~~~~~  201 (317)
T TIGR01181       145 APSSPYSASKAASDHLVRAYHRTY---GLPALITRCSNNYGPYQFPE--K------------------LIPLMITNALAG  201 (317)
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHh---CCCeEEEEeccccCCCCCcc--c------------------HHHHHHHHHhcC
Confidence            133579999999999999987763   78999999998877642100  0                  000011111111


Q ss_pred             c-------CCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCcc
Q 021960          257 L-------GNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT  297 (305)
Q Consensus       257 ~-------~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~  297 (305)
                      .       +.....++.++|+++++..++.+.   ..|+++++-++..
T Consensus       202 ~~~~~~~~g~~~~~~i~v~D~a~~~~~~~~~~---~~~~~~~~~~~~~  246 (317)
T TIGR01181       202 KPLPVYGDGQQVRDWLYVEDHCRAIYLVLEKG---RVGETYNIGGGNE  246 (317)
T ss_pred             CCceEeCCCceEEeeEEHHHHHHHHHHHHcCC---CCCceEEeCCCCc
Confidence            0       011224668999999999988653   3578888877654

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=99.78  E-value=2e-17  Score=151.46  Aligned_cols=236  Identities=14%  Similarity=0.009  Sum_probs=155.9

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhh-Hhhh------cCCCCeEEEEecCCCHHHHHHHHHH
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSV-LAST------LAPAPVTFVHCDVSLEEDIENLINS   99 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~-~~~~------~~~~~v~~~~~D~~d~~~i~~~~~~   99 (305)
                      ..+++|++|||||+|.||.+++++|.++|++|++++|....... ....      ....++.++.+|+.|.+++.++++ 
T Consensus        11 ~~~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~-   89 (348)
T PRK15181         11 LVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACK-   89 (348)
T ss_pred             ccccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhh-
Confidence            35678999999999999999999999999999999885432211 1110      011357889999999888777664 


Q ss_pred             HHHhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCC---
Q 021960          100 TVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGG---  176 (305)
Q Consensus       100 ~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~---  176 (305)
                            .+|+|||.|+.....        ...++....+++|+.++.++++.+..    .+..++|++||...+-..   
T Consensus        90 ------~~d~ViHlAa~~~~~--------~~~~~~~~~~~~Nv~gt~nll~~~~~----~~~~~~v~~SS~~vyg~~~~~  151 (348)
T PRK15181         90 ------NVDYVLHQAALGSVP--------RSLKDPIATNSANIDGFLNMLTAARD----AHVSSFTYAASSSTYGDHPDL  151 (348)
T ss_pred             ------CCCEEEECccccCch--------hhhhCHHHHHHHHHHHHHHHHHHHHH----cCCCeEEEeechHhhCCCCCC
Confidence                  489999999864221        12233456789999999888887643    445689999987543211   


Q ss_pred             --------CCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHH
Q 021960          177 --------LGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVR  248 (305)
Q Consensus       177 --------~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (305)
                              .....|+.+|.+.+.+++.++.+   +++++..+.|+.+..|.....   ....          ......+.
T Consensus       152 ~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~vyGp~~~~~---~~~~----------~~i~~~~~  215 (348)
T PRK15181        152 PKIEERIGRPLSPYAVTKYVNELYADVFARS---YEFNAIGLRYFNVFGRRQNPN---GAYS----------AVIPRWIL  215 (348)
T ss_pred             CCCCCCCCCCCChhhHHHHHHHHHHHHHHHH---hCCCEEEEEecceeCcCCCCC---Cccc----------cCHHHHHH
Confidence                    12457999999999999887665   479999999999988742100   0000          00001111


Q ss_pred             HHHH--HHhhc--CCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCcc
Q 021960          249 KMEE--FVSGL--GNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT  297 (305)
Q Consensus       249 ~~~~--~~~~~--~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~  297 (305)
                      .+..  .....  +.....++..+|++++++.++........|+++++.+|..
T Consensus       216 ~~~~~~~i~~~g~g~~~rd~i~v~D~a~a~~~~~~~~~~~~~~~~yni~~g~~  268 (348)
T PRK15181        216 SLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTNDLASKNKVYNVAVGDR  268 (348)
T ss_pred             HHHcCCCcEEeCCCCceEeeEEHHHHHHHHHHHHhcccccCCCCEEEecCCCc
Confidence            1110  00001  1223456789999999987665332224688999987754

>PLN02240 UDP-glucose 4-epimerase

Probab=99.77  E-value=9.9e-17  Score=146.81  Aligned_cols=171  Identities=20%  Similarity=0.184  Sum_probs=124.8

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchh----hhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHH
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLG----SVLASTL--APAPVTFVHCDVSLEEDIENLINSTV  101 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~----~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~  101 (305)
                      .|.+|++|||||+|+||+++++.|+++|++|++++|.....    .......  ...++.++.+|++|.+++..+++.. 
T Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~-   80 (352)
T PLN02240          2 SLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFAST-   80 (352)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhC-
Confidence            46789999999999999999999999999999987653221    1111111  1235788999999999998887653 


Q ss_pred             HhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEeccccccc-------
Q 021960          102 SRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVM-------  174 (305)
Q Consensus       102 ~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~-------  174 (305)
                          .+|+|||+|+.....        .+.+++.+.+++|+.++.++++++.    +.+..++|++||...+-       
T Consensus        81 ----~~d~vih~a~~~~~~--------~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~vyg~~~~~~~  144 (352)
T PLN02240         81 ----RFDAVIHFAGLKAVG--------ESVAKPLLYYDNNLVGTINLLEVMA----KHGCKKLVFSSSATVYGQPEEVPC  144 (352)
T ss_pred             ----CCCEEEEccccCCcc--------ccccCHHHHHHHHHHHHHHHHHHHH----HcCCCEEEEEccHHHhCCCCCCCC
Confidence                699999999964221        1334567889999999988887653    34456899999964331       


Q ss_pred             ----CCCCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCcccc
Q 021960          175 ----GGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVAT  217 (305)
Q Consensus       175 ----~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T  217 (305)
                          +......|+.+|.+.+.+++.++.+  ..++.+..+.++.+..
T Consensus       145 ~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~--~~~~~~~~~R~~~v~G  189 (352)
T PLN02240        145 TEEFPLSATNPYGRTKLFIEEICRDIHAS--DPEWKIILLRYFNPVG  189 (352)
T ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHh--cCCCCEEEEeecCcCC
Confidence                1123568999999999999988765  2357777777765543

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.77  E-value=5.4e-17  Score=148.66  Aligned_cols=229  Identities=16%  Similarity=0.079  Sum_probs=150.8

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCe-EEEEecCcc--hhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 021960           33 VAIITGGARGIGEAAVRLFARHGAK-VVIADVEDT--LGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDI  109 (305)
Q Consensus        33 ~vlVtGas~giG~~ia~~l~~~g~~-vv~~~r~~~--~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~  109 (305)
                      ++|||||+|+||+++++.|+++|+. |+.+++...  ..........+.++.++.+|++|.+++++++++.     .+|+
T Consensus         2 kilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~d~   76 (352)
T PRK10084          2 KILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADICDRAELDRIFAQH-----QPDA   76 (352)
T ss_pred             eEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHHhcccCCceEEEEecCCCHHHHHHHHHhc-----CCCE
Confidence            5899999999999999999999976 444554321  1122221112345788999999999999888752     6999


Q ss_pred             EEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC-----CCCEEEEecccccccC---------
Q 021960          110 LYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINR-----GGGCIISTASVAGVMG---------  175 (305)
Q Consensus       110 li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~iv~isS~~~~~~---------  175 (305)
                      |||+||.....        .+.+..++.+++|+.++.++++.+.+.|...     +..++|++||.+.+-.         
T Consensus        77 vih~A~~~~~~--------~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~  148 (352)
T PRK10084         77 VMHLAAESHVD--------RSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVEN  148 (352)
T ss_pred             EEECCcccCCc--------chhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccccccc
Confidence            99999864221        1122346689999999999999998765321     2348999998643321         


Q ss_pred             ------------CCCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCc
Q 021960          176 ------------GLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPS  243 (305)
Q Consensus       176 ------------~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (305)
                                  ......|+.+|.+.+.+++.++.++   ++.+..+.|+.+..|...  ...              + .
T Consensus       149 ~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~vilr~~~v~Gp~~~--~~~--------------~-~  208 (352)
T PRK10084        149 SEELPLFTETTAYAPSSPYSASKASSDHLVRAWLRTY---GLPTIVTNCSNNYGPYHF--PEK--------------L-I  208 (352)
T ss_pred             cccCCCccccCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeccceeCCCcC--ccc--------------h-H
Confidence                        1234689999999999999988774   577777888777665310  000              0 0


Q ss_pred             HHHHHHHHH--HHhhc--CCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCcc
Q 021960          244 QKEVRKMEE--FVSGL--GNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT  297 (305)
Q Consensus       244 ~~~~~~~~~--~~~~~--~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~  297 (305)
                      ...+.....  ....+  +.....++.++|++++++.++...   ..|+++++.++..
T Consensus       209 ~~~~~~~~~~~~~~~~~~g~~~~~~v~v~D~a~a~~~~l~~~---~~~~~yni~~~~~  263 (352)
T PRK10084        209 PLVILNALEGKPLPIYGKGDQIRDWLYVEDHARALYKVVTEG---KAGETYNIGGHNE  263 (352)
T ss_pred             HHHHHHHhcCCCeEEeCCCCeEEeeEEHHHHHHHHHHHHhcC---CCCceEEeCCCCc
Confidence            000011100  00000  122345789999999998888653   2478899887754

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.76  E-value=3.6e-17  Score=151.95  Aligned_cols=171  Identities=19%  Similarity=0.275  Sum_probs=142.7

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCC-eEEEEecCcchhhhHhhhcC----CCCeEEEEecCCCHHHHHHHHHHHHH
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGA-KVVIADVEDTLGSVLASTLA----PAPVTFVHCDVSLEEDIENLINSTVS  102 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~-~vv~~~r~~~~~~~~~~~~~----~~~v~~~~~D~~d~~~i~~~~~~~~~  102 (305)
                      .++||++|||||+|.||+++|+++++.+. +++++++++.....+..++.    ..++.++-+|+.|.+.++.+++..  
T Consensus       247 ~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~--  324 (588)
T COG1086         247 MLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGH--  324 (588)
T ss_pred             HcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcC--
Confidence            45799999999999999999999999886 58889999888776666553    367899999999999999888754  


Q ss_pred             hcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccc
Q 021960          103 RYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAY  182 (305)
Q Consensus       103 ~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y  182 (305)
                         ++|+|+|+|+.     ++-++.|   ....+.+++|+.|+.++++++..    .+-.++|.+|+.-+..|.   +.|
T Consensus       325 ---kvd~VfHAAA~-----KHVPl~E---~nP~Eai~tNV~GT~nv~~aa~~----~~V~~~V~iSTDKAV~Pt---Nvm  386 (588)
T COG1086         325 ---KVDIVFHAAAL-----KHVPLVE---YNPEEAIKTNVLGTENVAEAAIK----NGVKKFVLISTDKAVNPT---NVM  386 (588)
T ss_pred             ---CCceEEEhhhh-----ccCcchh---cCHHHHHHHhhHhHHHHHHHHHH----hCCCEEEEEecCcccCCc---hHh
Confidence               69999999987     3344444   45678899999999999998876    455689999999888764   679


Q ss_pred             hhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccc
Q 021960          183 TASKHAIVGLTKNAACELGRYGIRVNCISPFGVATS  218 (305)
Q Consensus       183 ~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~  218 (305)
                      |++|...+.++.+++......+.++.+|.-|.|-..
T Consensus       387 GaTKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGS  422 (588)
T COG1086         387 GATKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGS  422 (588)
T ss_pred             hHHHHHHHHHHHHHhhccCCCCcEEEEEEecceecC
Confidence            999999999999999876655789999999988553

>PLN02686 cinnamoyl-CoA reductase

Probab=99.76  E-value=8.4e-17  Score=148.27  Aligned_cols=171  Identities=18%  Similarity=0.139  Sum_probs=123.1

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc-------CCCCeEEEEecCCCHHHHHHHHHHH
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL-------APAPVTFVHCDVSLEEDIENLINST  100 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~-------~~~~v~~~~~D~~d~~~i~~~~~~~  100 (305)
                      ..++|++|||||+|+||+++++.|+++|++|+++.|+......+....       ....+.++.+|++|.+++.++++  
T Consensus        50 ~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~--  127 (367)
T PLN02686         50 DAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLREMEMFGEMGRSNDGIWTVMANLTEPESLHEAFD--  127 (367)
T ss_pred             CCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhccccccCCceEEEEcCCCCHHHHHHHHH--
Confidence            567899999999999999999999999999988777654333322210       01247889999999999888775  


Q ss_pred             HHhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEeccccc-cc-----
Q 021960          101 VSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAG-VM-----  174 (305)
Q Consensus       101 ~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~-~~-----  174 (305)
                           .+|.+||.|+......    ...    ......++|+.++.++++++...   .+..++|++||.++ ..     
T Consensus       128 -----~~d~V~hlA~~~~~~~----~~~----~~~~~~~~nv~gt~~llea~~~~---~~v~r~V~~SS~~~~vyg~~~~  191 (367)
T PLN02686        128 -----GCAGVFHTSAFVDPAG----LSG----YTKSMAELEAKASENVIEACVRT---ESVRKCVFTSSLLACVWRQNYP  191 (367)
T ss_pred             -----hccEEEecCeeecccc----ccc----ccchhhhhhHHHHHHHHHHHHhc---CCccEEEEeccHHHhcccccCC
Confidence                 3789999998753321    000    01234567888887777775431   13458999999642 11     


Q ss_pred             ---C--------------CCCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCcccccc
Q 021960          175 ---G--------------GLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSM  219 (305)
Q Consensus       175 ---~--------------~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~  219 (305)
                         +              ......|+.+|.+.+.+++.++.+   +|+++++++|+.+.+|.
T Consensus       192 ~~~~~~i~E~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~gl~~v~lRp~~vyGp~  250 (367)
T PLN02686        192 HDLPPVIDEESWSDESFCRDNKLWYALGKLKAEKAAWRAARG---KGLKLATICPALVTGPG  250 (367)
T ss_pred             CCCCcccCCCCCCChhhcccccchHHHHHHHHHHHHHHHHHh---cCceEEEEcCCceECCC
Confidence               0              001246999999999999988776   58999999999999985

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.76  E-value=2e-16  Score=144.06  Aligned_cols=236  Identities=17%  Similarity=0.144  Sum_probs=149.2

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhh-Hh--hhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 021960           33 VAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSV-LA--STLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDI  109 (305)
Q Consensus        33 ~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~-~~--~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~  109 (305)
                      ++|||||+|+||+++++.|+++|++|++++|....... ..  ....+.++.++.+|++|.+++.++++.     .++|+
T Consensus         2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~~d~   76 (338)
T PRK10675          2 RVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHD-----HAIDT   76 (338)
T ss_pred             eEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhc-----CCCCE
Confidence            68999999999999999999999999988764322111 11  112234577889999999988887753     26999


Q ss_pred             EEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccC-----------C-C
Q 021960          110 LYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMG-----------G-L  177 (305)
Q Consensus       110 li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~-----------~-~  177 (305)
                      |||+||.....        ...+...+.+++|+.++.++++++.    +.+.++||++||...+-.           . .
T Consensus        77 vvh~a~~~~~~--------~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~~yg~~~~~~~~E~~~~~~  144 (338)
T PRK10675         77 VIHFAGLKAVG--------ESVQKPLEYYDNNVNGTLRLISAMR----AANVKNLIFSSSATVYGDQPKIPYVESFPTGT  144 (338)
T ss_pred             EEECCcccccc--------chhhCHHHHHHHHHHHHHHHHHHHH----HcCCCEEEEeccHHhhCCCCCCccccccCCCC
Confidence            99999864321        1123345678999999888877643    355578999999754311           0 2


Q ss_pred             CCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhc
Q 021960          178 GPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGL  257 (305)
Q Consensus       178 ~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (305)
                      ....|+.+|.+.+.+++.++++.  .++++..+.|+.+..+.....+....          ...+. .....+.......
T Consensus       145 p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~ilR~~~v~g~~~~~~~g~~~----------~~~~~-~~~~~~~~~~~~~  211 (338)
T PRK10675        145 PQSPYGKSKLMVEQILTDLQKAQ--PDWSIALLRYFNPVGAHPSGDMGEDP----------QGIPN-NLMPYIAQVAVGR  211 (338)
T ss_pred             CCChhHHHHHHHHHHHHHHHHhc--CCCcEEEEEeeeecCCCcccccccCC----------CCChh-HHHHHHHHHHhcC
Confidence            35789999999999999987663  35777777776665542111110000          00000 0011111111100


Q ss_pred             ---------------CCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          258 ---------------GNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       258 ---------------~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                                     +.....++.++|+|++++.++........|+++++.+|...
T Consensus       212 ~~~~~~~~~~~~~~~g~~~~~~v~v~D~a~~~~~~~~~~~~~~~~~~~ni~~~~~~  267 (338)
T PRK10675        212 RDSLAIFGNDYPTEDGTGVRDYIHVMDLADGHVAAMEKLANKPGVHIYNLGAGVGS  267 (338)
T ss_pred             CCceEEeCCcCCCCCCcEEEeeEEHHHHHHHHHHHHHhhhccCCCceEEecCCCce
Confidence                           11123578999999998887764211233688999877644

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.75  E-value=1.8e-16  Score=143.40  Aligned_cols=212  Identities=20%  Similarity=0.199  Sum_probs=147.4

Q ss_pred             CEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEEE
Q 021960           32 KVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILY  111 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~li  111 (305)
                      ++++||||+|+||.++++.|+++|++|++++|+.......    ....+.++.+|++|.++++++++       .+|+||
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~~~~~~~~~D~~~~~~l~~~~~-------~~d~vi   69 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNL----EGLDVEIVEGDLRDPASLRKAVA-------GCRALF   69 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCcccccc----ccCCceEEEeeCCCHHHHHHHHh-------CCCEEE
Confidence            3689999999999999999999999999999876543221    12348889999999998888775       589999


Q ss_pred             EcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCC--------------
Q 021960          112 NNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGL--------------  177 (305)
Q Consensus       112 ~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~--------------  177 (305)
                      |+|+....          ..++.+..+++|+.++.++++.+..    .+.+++|++||...+.+.+              
T Consensus        70 ~~a~~~~~----------~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~  135 (328)
T TIGR03466        70 HVAADYRL----------WAPDPEEMYAANVEGTRNLLRAALE----AGVERVVYTSSVATLGVRGDGTPADETTPSSLD  135 (328)
T ss_pred             Eeceeccc----------CCCCHHHHHHHHHHHHHHHHHHHHH----hCCCeEEEEechhhcCcCCCCCCcCccCCCCcc
Confidence            99985321          1123566788999998888887654    4456899999976543211              


Q ss_pred             -CCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhh
Q 021960          178 -GPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSG  256 (305)
Q Consensus       178 -~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (305)
                       ....|+.+|.+.+.+++.++.+   .++.+..+.|+.+..+......                 +...   .+......
T Consensus       136 ~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilR~~~~~G~~~~~~~-----------------~~~~---~~~~~~~~  192 (328)
T TIGR03466       136 DMIGHYKRSKFLAEQAALEMAAE---KGLPVVIVNPSTPIGPRDIKPT-----------------PTGR---IIVDFLNG  192 (328)
T ss_pred             cccChHHHHHHHHHHHHHHHHHh---cCCCEEEEeCCccCCCCCCCCC-----------------cHHH---HHHHHHcC
Confidence             1347999999999999988765   4799999999988665311000                 0000   00110000


Q ss_pred             ----cCCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecC
Q 021960          257 ----LGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDG  294 (305)
Q Consensus       257 ----~~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idg  294 (305)
                          .......++.++|+|+++..++...   ..|+.+++.|
T Consensus       193 ~~~~~~~~~~~~i~v~D~a~a~~~~~~~~---~~~~~~~~~~  231 (328)
T TIGR03466       193 KMPAYVDTGLNLVHVDDVAEGHLLALERG---RIGERYILGG  231 (328)
T ss_pred             CCceeeCCCcceEEHHHHHHHHHHHHhCC---CCCceEEecC
Confidence                0011224568999999998888653   3678888854

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=99.74  E-value=8.7e-17  Score=142.55  Aligned_cols=224  Identities=19%  Similarity=0.227  Sum_probs=153.4

Q ss_pred             EEecCCCchHHHHHHHHHHcC--CeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEEEE
Q 021960           35 IITGGARGIGEAAVRLFARHG--AKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILYN  112 (305)
Q Consensus        35 lVtGas~giG~~ia~~l~~~g--~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~li~  112 (305)
                      |||||+|.||.+++++|+++|  +.|.++++........ ....-....++.+|++|.+++.++++       ..|+|||
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~-~~~~~~~~~~~~~Di~d~~~l~~a~~-------g~d~V~H   72 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLK-DLQKSGVKEYIQGDITDPESLEEALE-------GVDVVFH   72 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccch-hhhcccceeEEEeccccHHHHHHHhc-------CCceEEE
Confidence            699999999999999999999  7888888765543211 11111223389999999999998886       5899999


Q ss_pred             cCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccC---C-------------
Q 021960          113 NAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMG---G-------------  176 (305)
Q Consensus       113 nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~---~-------------  176 (305)
                      +|+.....         .....++++++|+.|+-++++++..    .+-.++|++||.+...+   .             
T Consensus        73 ~Aa~~~~~---------~~~~~~~~~~vNV~GT~nvl~aa~~----~~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~  139 (280)
T PF01073_consen   73 TAAPVPPW---------GDYPPEEYYKVNVDGTRNVLEAARK----AGVKRLVYTSSISVVFDNYKGDPIINGDEDTPYP  139 (280)
T ss_pred             eCcccccc---------CcccHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEcCcceeEeccCCCCcccCCcCCccc
Confidence            99975331         1244677899999999888887754    46679999999987654   1             


Q ss_pred             -CCCccchhhHHHHHHHHHHHHH-HHC-cCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHH
Q 021960          177 -LGPHAYTASKHAIVGLTKNAAC-ELG-RYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEF  253 (305)
Q Consensus       177 -~~~~~Y~~sKaa~~~~~~~la~-e~~-~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (305)
                       .....|+.||+..|.++..... ++. ...+...+|+|..|..|......+.                   ..+.....
T Consensus       140 ~~~~~~Y~~SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~~~-------------------~~~~~~~g  200 (280)
T PF01073_consen  140 SSPLDPYAESKALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQRLVPR-------------------LVKMVRSG  200 (280)
T ss_pred             ccccCchHHHHHHHHHHHHhhcccccccccceeEEEEeccEEeCcccccccch-------------------hhHHHHhc
Confidence             1234899999999999987665 111 1248888999999988753322111                   11111110


Q ss_pred             --HhhcC--CCCCCCCCHHHHHHHHHHhcc---CC--CCceeccEEEecCCccc
Q 021960          254 --VSGLG--NLKGTTLRSKDIAEAALYLAS---DE--SRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       254 --~~~~~--~~~~~~~~~~dva~~v~~l~s---~~--~~~~tG~~i~idgG~~~  298 (305)
                        .-..+  ...-.+..++++|.+.+..+.   +.  .....|+.+.|.+|-..
T Consensus       201 ~~~~~~g~~~~~~~~vyV~NvA~ahvlA~~~L~~~~~~~~~~G~~y~itd~~p~  254 (280)
T PF01073_consen  201 LFLFQIGDGNNLFDFVYVENVAHAHVLAAQALLEPGKPERVAGQAYFITDGEPV  254 (280)
T ss_pred             ccceeecCCCceECcEeHHHHHHHHHHHHHHhccccccccCCCcEEEEECCCcc
Confidence              00011  112335679999998876433   22  34589999999888654

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.74  E-value=4.9e-16  Score=135.78  Aligned_cols=200  Identities=15%  Similarity=0.126  Sum_probs=128.6

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCH-HHHHHHHHHHHHhcCCcc
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLE-EDIENLINSTVSRYGRLD  108 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~-~~i~~~~~~~~~~~g~id  108 (305)
                      +++++|||||+|+||+++++.|+++|++|+++.|+.........  .+.++.++.+|++|. +++.+.   +.   ..+|
T Consensus        16 ~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~l~~~---~~---~~~d   87 (251)
T PLN00141         16 KTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLP--QDPSLQIVRADVTEGSDKLVEA---IG---DDSD   87 (251)
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcc--cCCceEEEEeeCCCCHHHHHHH---hh---cCCC
Confidence            46899999999999999999999999999988887654332211  123588899999983 333222   20   2699


Q ss_pred             EEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEeccccccc---CCCCCccchhh
Q 021960          109 ILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVM---GGLGPHAYTAS  185 (305)
Q Consensus       109 ~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~---~~~~~~~Y~~s  185 (305)
                      +||+|+|.....   +++         ..+++|..++.++++++.    +.+.++||++||...+-   +.+....|...
T Consensus        88 ~vi~~~g~~~~~---~~~---------~~~~~n~~~~~~ll~a~~----~~~~~~iV~iSS~~v~g~~~~~~~~~~~~~~  151 (251)
T PLN00141         88 AVICATGFRRSF---DPF---------APWKVDNFGTVNLVEACR----KAGVTRFILVSSILVNGAAMGQILNPAYIFL  151 (251)
T ss_pred             EEEECCCCCcCC---CCC---------CceeeehHHHHHHHHHHH----HcCCCEEEEEccccccCCCcccccCcchhHH
Confidence            999999864211   111         113577777777777753    45668999999986432   22234457666


Q ss_pred             HHHHHHHHHHHHHH--HCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCC
Q 021960          186 KHAIVGLTKNAACE--LGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGT  263 (305)
Q Consensus       186 Kaa~~~~~~~la~e--~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (305)
                      |.+...+...+..|  +...+++++.|+||++.+++.......              .+.              ......
T Consensus       152 ~~~~~~~~~k~~~e~~l~~~gi~~~iirpg~~~~~~~~~~~~~--------------~~~--------------~~~~~~  203 (251)
T PLN00141        152 NLFGLTLVAKLQAEKYIRKSGINYTIVRPGGLTNDPPTGNIVM--------------EPE--------------DTLYEG  203 (251)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCcEEEEECCCccCCCCCceEEE--------------CCC--------------CccccC
Confidence            65444332222222  456789999999999977642111000              000              011234


Q ss_pred             CCCHHHHHHHHHHhccCC
Q 021960          264 TLRSKDIAEAALYLASDE  281 (305)
Q Consensus       264 ~~~~~dva~~v~~l~s~~  281 (305)
                      .++++|+|+.+..++...
T Consensus       204 ~i~~~dvA~~~~~~~~~~  221 (251)
T PLN00141        204 SISRDQVAEVAVEALLCP  221 (251)
T ss_pred             cccHHHHHHHHHHHhcCh
Confidence            578999999999998754

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.73  E-value=1.5e-15  Score=139.13  Aligned_cols=222  Identities=16%  Similarity=0.140  Sum_probs=145.4

Q ss_pred             EEEEecCCCchHHHHHHHHHHcC--CeEEEEecCcchhh---hHhhhc-----C----C-CCeEEEEecCCCH------H
Q 021960           33 VAIITGGARGIGEAAVRLFARHG--AKVVIADVEDTLGS---VLASTL-----A----P-APVTFVHCDVSLE------E   91 (305)
Q Consensus        33 ~vlVtGas~giG~~ia~~l~~~g--~~vv~~~r~~~~~~---~~~~~~-----~----~-~~v~~~~~D~~d~------~   91 (305)
                      ++|||||||+||+++++.|+++|  ++|+++.|+.....   .+.+..     .    . .++.++.+|++++      +
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~   80 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA   80 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence            48999999999999999999998  67988888754221   111110     0    1 4689999999864      2


Q ss_pred             HHHHHHHHHHHhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccc
Q 021960           92 DIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVA  171 (305)
Q Consensus        92 ~i~~~~~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~  171 (305)
                      ....+.       ..+|+|||||+.....           ..++...++|+.++..+++.+..    .+..+++++||.+
T Consensus        81 ~~~~~~-------~~~d~vih~a~~~~~~-----------~~~~~~~~~nv~g~~~ll~~a~~----~~~~~~v~iSS~~  138 (367)
T TIGR01746        81 EWERLA-------ENVDTIVHNGALVNWV-----------YPYSELRAANVLGTREVLRLAAS----GRAKPLHYVSTIS  138 (367)
T ss_pred             HHHHHH-------hhCCEEEeCCcEeccC-----------CcHHHHhhhhhHHHHHHHHHHhh----CCCceEEEEcccc
Confidence            332222       3699999999964211           12456778999998887776643    4445699999987


Q ss_pred             cccCC----------------CCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhh
Q 021960          172 GVMGG----------------LGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDE  235 (305)
Q Consensus       172 ~~~~~----------------~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~  235 (305)
                      .....                .....|+.+|.+.+.+++.++.    .|++++.+.||.+.++.....+..         
T Consensus       139 v~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~g~~~~i~Rpg~v~G~~~~g~~~~---------  205 (367)
T TIGR01746       139 VLAAIDLSTVTEDDAIVTPPPGLAGGYAQSKWVAELLVREASD----RGLPVTIVRPGRILGNSYTGAINS---------  205 (367)
T ss_pred             ccCCcCCCCccccccccccccccCCChHHHHHHHHHHHHHHHh----cCCCEEEECCCceeecCCCCCCCc---------
Confidence            65331                1134799999999999876543    389999999999987632111111         


Q ss_pred             hhccCCCcHHHHH-HHHHHHh--hcCCC---CCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCcc
Q 021960          236 CMNFGIPSQKEVR-KMEEFVS--GLGNL---KGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT  297 (305)
Q Consensus       236 ~~~~~~~~~~~~~-~~~~~~~--~~~~~---~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~  297 (305)
                              .+.+. .+.....  .+...   ...+..++|+++.++.++.......+|+++++.++..
T Consensus       206 --------~~~~~~~~~~~~~~~~~p~~~~~~~~~~~vddva~ai~~~~~~~~~~~~~~~~~v~~~~~  265 (367)
T TIGR01746       206 --------SDILWRMVKGCLALGAYPDSPELTEDLTPVDYVARAIVALSSQPAASAGGPVFHVVNPEP  265 (367)
T ss_pred             --------hhHHHHHHHHHHHhCCCCCCCccccCcccHHHHHHHHHHHHhCCCcccCCceEEecCCCC
Confidence                    01111 1111110  11111   1236789999999999987664434588999988643

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.73  E-value=6e-16  Score=133.31  Aligned_cols=220  Identities=23%  Similarity=0.241  Sum_probs=155.0

Q ss_pred             EEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEEEEc
Q 021960           34 AIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILYNN  113 (305)
Q Consensus        34 vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~li~n  113 (305)
                      ||||||+|.||.+++++|.++|+.|+.+.|+...........   ++.++.+|+.|.++++++++..     .+|.|||+
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~---~~~~~~~dl~~~~~~~~~~~~~-----~~d~vi~~   72 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKL---NVEFVIGDLTDKEQLEKLLEKA-----NIDVVIHL   72 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHT---TEEEEESETTSHHHHHHHHHHH-----TESEEEEE
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccc---eEEEEEeecccccccccccccc-----CceEEEEe
Confidence            699999999999999999999999888877766554333222   5899999999999999998876     79999999


Q ss_pred             CCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCC-----------CCCccc
Q 021960          114 AGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGG-----------LGPHAY  182 (305)
Q Consensus       114 ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~-----------~~~~~Y  182 (305)
                      |+....        ..+.+.....++.|+.++.++++.+..    .+..++|++||...+...           .....|
T Consensus        73 a~~~~~--------~~~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~i~~sS~~~y~~~~~~~~~e~~~~~~~~~Y  140 (236)
T PF01370_consen   73 AAFSSN--------PESFEDPEEIIEANVQGTRNLLEAARE----AGVKRFIFLSSASVYGDPDGEPIDEDSPINPLSPY  140 (236)
T ss_dssp             BSSSSH--------HHHHHSHHHHHHHHHHHHHHHHHHHHH----HTTSEEEEEEEGGGGTSSSSSSBETTSGCCHSSHH
T ss_pred             eccccc--------ccccccccccccccccccccccccccc----ccccccccccccccccccccccccccccccccccc
Confidence            986421        113356777888898887777766654    445799999996443322           124579


Q ss_pred             hhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHH--h--hcC
Q 021960          183 TASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFV--S--GLG  258 (305)
Q Consensus       183 ~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~  258 (305)
                      +.+|...+.+++.+..+.   ++++..+.|+.+..+..  .-..  ..          ......+..+..-.  .  .-+
T Consensus       141 ~~~K~~~e~~~~~~~~~~---~~~~~~~R~~~vyG~~~--~~~~--~~----------~~~~~~~~~~~~~~~~~~~~~~  203 (236)
T PF01370_consen  141 GASKRAAEELLRDYAKKY---GLRVTILRPPNVYGPGN--PNNN--SS----------SFLPSLIRQALKGKPIKIPGDG  203 (236)
T ss_dssp             HHHHHHHHHHHHHHHHHH---TSEEEEEEESEEESTTS--SSSS--TS----------SHHHHHHHHHHTTSSEEEESTS
T ss_pred             cccccccccccccccccc---ccccccccccccccccc--cccc--cc----------cccchhhHHhhcCCcccccCCC
Confidence            999999999999988774   79999999999988760  0000  00          00011111111100  0  002


Q ss_pred             CCCCCCCCHHHHHHHHHHhccCCCCceeccEEEe
Q 021960          259 NLKGTTLRSKDIAEAALYLASDESRYVSGHNLVV  292 (305)
Q Consensus       259 ~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~i  292 (305)
                      .....++..+|++++++++++...  ..|++++|
T Consensus       204 ~~~~~~i~v~D~a~~~~~~~~~~~--~~~~~yNi  235 (236)
T PF01370_consen  204 SQVRDFIHVDDLAEAIVAALENPK--AAGGIYNI  235 (236)
T ss_dssp             SCEEEEEEHHHHHHHHHHHHHHSC--TTTEEEEE
T ss_pred             CCccceEEHHHHHHHHHHHHhCCC--CCCCEEEe
Confidence            233446789999999999998764  56888776

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PLN02427 UDP-apiose/xylose synthase

Probab=99.72  E-value=1.2e-15  Score=141.69  Aligned_cols=234  Identities=16%  Similarity=0.162  Sum_probs=148.5

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHc-CCeEEEEecCcchhhhHhhhc---CCCCeEEEEecCCCHHHHHHHHHHHHHh
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARH-GAKVVIADVEDTLGSVLASTL---APAPVTFVHCDVSLEEDIENLINSTVSR  103 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~-g~~vv~~~r~~~~~~~~~~~~---~~~~v~~~~~D~~d~~~i~~~~~~~~~~  103 (305)
                      .++.++||||||+|.||+++++.|+++ |+.|++++|+......+....   ...++.++.+|++|.++++++++     
T Consensus        11 ~~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~-----   85 (386)
T PLN02427         11 PIKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIK-----   85 (386)
T ss_pred             cccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhh-----
Confidence            345578999999999999999999998 589999988654433222110   12358899999999988887764     


Q ss_pred             cCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCC-------
Q 021960          104 YGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGG-------  176 (305)
Q Consensus       104 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~-------  176 (305)
                        .+|+|||+|+.....    ..    ..+..+.+..|+.+..++++++..    .+ .++|++||...+-..       
T Consensus        86 --~~d~ViHlAa~~~~~----~~----~~~~~~~~~~n~~gt~~ll~aa~~----~~-~r~v~~SS~~vYg~~~~~~~~e  150 (386)
T PLN02427         86 --MADLTINLAAICTPA----DY----NTRPLDTIYSNFIDALPVVKYCSE----NN-KRLIHFSTCEVYGKTIGSFLPK  150 (386)
T ss_pred             --cCCEEEEcccccChh----hh----hhChHHHHHHHHHHHHHHHHHHHh----cC-CEEEEEeeeeeeCCCcCCCCCc
Confidence              489999999864321    11    011233456799998888776643    23 589999996532110       


Q ss_pred             --------------------------CCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCC
Q 021960          177 --------------------------LGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDG  230 (305)
Q Consensus       177 --------------------------~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~  230 (305)
                                                .....|+.+|.+.+.+++.++..   .++.+..+.|+.+..+...- .......
T Consensus       151 ~~p~~~~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilR~~~vyGp~~~~-~~~~~~~  226 (386)
T PLN02427        151 DHPLRQDPAFYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDF-IPGIDGP  226 (386)
T ss_pred             ccccccccccccccccccccccCCCCccccchHHHHHHHHHHHHHHHhh---cCCceEEecccceeCCCCCc-ccccccc
Confidence                                      01236999999999999876544   57999999999998874210 0000000


Q ss_pred             chhhhhhccCCCcHHHHHHH-HHHHhhc-------CCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCC
Q 021960          231 EEEDECMNFGIPSQKEVRKM-EEFVSGL-------GNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGG  295 (305)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~-------~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG  295 (305)
                      .       ...+  ..+..+ .......       +.....++.++|++++++.++.... ...|+++++.+|
T Consensus       227 ~-------~~~~--~~i~~~~~~~~~~~~~~~~g~g~~~r~~i~V~Dva~ai~~al~~~~-~~~g~~yni~~~  289 (386)
T PLN02427        227 S-------EGVP--RVLACFSNNLLRREPLKLVDGGQSQRTFVYIKDAIEAVLLMIENPA-RANGHIFNVGNP  289 (386)
T ss_pred             c-------cccc--hHHHHHHHHHhcCCCeEEECCCCceECcEeHHHHHHHHHHHHhCcc-cccCceEEeCCC
Confidence            0       0000  011101 1111110       1122357899999999998886531 135788998775

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.72  E-value=1.4e-15  Score=137.36  Aligned_cols=235  Identities=19%  Similarity=0.111  Sum_probs=151.0

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhh-hHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEEE
Q 021960           33 VAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGS-VLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILY  111 (305)
Q Consensus        33 ~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~-~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~li  111 (305)
                      ++|||||+|+||+++++.|+++|++|+++++...... .........++.++.+|++|.++++++++.     .++|+||
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~vv   75 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERITRVTFVEGDLRDRELLDRLFEE-----HKIDAVI   75 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhccccceEEEECCCCCHHHHHHHHHh-----CCCcEEE
Confidence            4799999999999999999999999988866433211 111111111477889999999999888763     3799999


Q ss_pred             EcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCC-----------CCCc
Q 021960          112 NNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGG-----------LGPH  180 (305)
Q Consensus       112 ~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~-----------~~~~  180 (305)
                      ||||.....        .+.++..+.+..|+.++..+++.+..    .+..++|++||...+...           ....
T Consensus        76 ~~ag~~~~~--------~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~ss~~~~g~~~~~~~~e~~~~~~~~  143 (328)
T TIGR01179        76 HFAGLIAVG--------ESVQDPLKYYRNNVVNTLNLLEAMQQ----TGVKKFIFSSSAAVYGEPSSIPISEDSPLGPIN  143 (328)
T ss_pred             ECccccCcc--------hhhcCchhhhhhhHHHHHHHHHHHHh----cCCCEEEEecchhhcCCCCCCCccccCCCCCCC
Confidence            999965221        12234556788999999888776543    445689999886543211           1236


Q ss_pred             cchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHh-h---
Q 021960          181 AYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVS-G---  256 (305)
Q Consensus       181 ~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---  256 (305)
                      .|+.+|++.+.+++.++.+.  .++.+..+.|+.+..+.....+....            .+....+..+..... .   
T Consensus       144 ~y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~g~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~  209 (328)
T TIGR01179       144 PYGRSKLMSERILRDLSKAD--PGLSYVILRYFNVAGADPEGTIGEDP------------PGITHLIPYACQVAVGKRDK  209 (328)
T ss_pred             chHHHHHHHHHHHHHHHHhc--cCCCEEEEecCcccCCCCCCccccCC------------cccchHHHHHHHHHHhCCCC
Confidence            79999999999999987652  47899999998887763211100000            000001111111110 0   


Q ss_pred             -------c----CCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          257 -------L----GNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       257 -------~----~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                             +    +.....++..+|++++++.++........|+++++.+|...
T Consensus       210 ~~~~~~~~~~~~g~~~~~~v~~~D~a~~~~~~~~~~~~~~~~~~~n~~~~~~~  262 (328)
T TIGR01179       210 LTIFGTDYPTPDGTCVRDYIHVMDLADAHLAALEYLLNGGESHVYNLGYGQGF  262 (328)
T ss_pred             eEEeCCcccCCCCceEEeeeeHHHHHHHHHHHHhhhhcCCCcceEEcCCCCcc
Confidence                   0    01112457889999999988864322245788888776543

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.72  E-value=1.6e-15  Score=130.36  Aligned_cols=225  Identities=18%  Similarity=0.082  Sum_probs=158.8

Q ss_pred             CEEEEecCCCchHHHHHHHHHHcCC--eEEEEecCcch--hhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 021960           32 KVAIITGGARGIGEAAVRLFARHGA--KVVIADVEDTL--GSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRL  107 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~g~--~vv~~~r~~~~--~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~i  107 (305)
                      +++|||||.|+||+++++.+.++.-  .|+.++.-.-.  .+.+.......++.+++.|+.|.+.+.+++++.     ++
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~-----~~   75 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDICDRELVDRLFKEY-----QP   75 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhcCCCceEEeccccCHHHHHHHHHhc-----CC
Confidence            4689999999999999999998754  36666553322  222333345568999999999999888888754     69


Q ss_pred             cEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccc-------------c
Q 021960          108 DILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGV-------------M  174 (305)
Q Consensus       108 d~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~-------------~  174 (305)
                      |+|+|-|+-....        -+.++.+..+++|+.|++.+++++..+-.+   -+++.||..--+             .
T Consensus        76 D~VvhfAAESHVD--------RSI~~P~~Fi~TNv~GT~~LLEaar~~~~~---frf~HISTDEVYG~l~~~~~~FtE~t  144 (340)
T COG1088          76 DAVVHFAAESHVD--------RSIDGPAPFIQTNVVGTYTLLEAARKYWGK---FRFHHISTDEVYGDLGLDDDAFTETT  144 (340)
T ss_pred             CeEEEechhcccc--------ccccChhhhhhcchHHHHHHHHHHHHhccc---ceEEEeccccccccccCCCCCcccCC
Confidence            9999999876553        244556677899999999999998775422   479999864321             2


Q ss_pred             CCCCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHH
Q 021960          175 GGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFV  254 (305)
Q Consensus       175 ~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (305)
                      |....++|++|||+-++|++++.+-|   |+.+....+..-..|..                    .|.+-....+.+.+
T Consensus       145 p~~PsSPYSASKAasD~lVray~~TY---glp~~ItrcSNNYGPyq--------------------fpEKlIP~~I~nal  201 (340)
T COG1088         145 PYNPSSPYSASKAASDLLVRAYVRTY---GLPATITRCSNNYGPYQ--------------------FPEKLIPLMIINAL  201 (340)
T ss_pred             CCCCCCCcchhhhhHHHHHHHHHHHc---CCceEEecCCCCcCCCc--------------------CchhhhHHHHHHHH
Confidence            34457899999999999999998885   78888777765555431                    01111111111111


Q ss_pred             h-------hcCCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          255 S-------GLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       255 ~-------~~~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      .       +-+...+.++-++|=+.++..++....   -|++++|.||.-.
T Consensus       202 ~g~~lpvYGdG~~iRDWl~VeDh~~ai~~Vl~kg~---~GE~YNIgg~~E~  249 (340)
T COG1088         202 LGKPLPVYGDGLQIRDWLYVEDHCRAIDLVLTKGK---IGETYNIGGGNER  249 (340)
T ss_pred             cCCCCceecCCcceeeeEEeHhHHHHHHHHHhcCc---CCceEEeCCCccc
Confidence            1       113345667889999999999887753   3999999998643

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.72  E-value=6.8e-17  Score=141.26  Aligned_cols=221  Identities=19%  Similarity=0.186  Sum_probs=143.8

Q ss_pred             EEEecCCCchHHHHHHHHHHcCC-eEEEEecCcchhhhHhhhc----CCCCeE----EEEecCCCHHHHHHHHHHHHHhc
Q 021960           34 AIITGGARGIGEAAVRLFARHGA-KVVIADVEDTLGSVLASTL----APAPVT----FVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        34 vlVtGas~giG~~ia~~l~~~g~-~vv~~~r~~~~~~~~~~~~----~~~~v~----~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      ||||||+|.||+++|++|++.+. .++++++++...-.+...+    .+.++.    .+.+|++|.+.++.++++.    
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~----   76 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEY----   76 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT------
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhc----
Confidence            69999999999999999999885 6999999998877776665    233343    4588999998888877654    


Q ss_pred             CCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchh
Q 021960          105 GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTA  184 (305)
Q Consensus       105 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~  184 (305)
                       ++|+|+|.|+.     ++-++.+.   ...+.+++|+.|+.++++++..    .+-.++|++|+.-+..|.   +.||+
T Consensus        77 -~pdiVfHaAA~-----KhVpl~E~---~p~eav~tNv~GT~nv~~aa~~----~~v~~~v~ISTDKAv~Pt---nvmGa  140 (293)
T PF02719_consen   77 -KPDIVFHAAAL-----KHVPLMED---NPFEAVKTNVLGTQNVAEAAIE----HGVERFVFISTDKAVNPT---NVMGA  140 (293)
T ss_dssp             -T-SEEEE-----------HHHHCC---CHHHHHHHHCHHHHHHHHHHHH----TT-SEEEEEEECGCSS-----SHHHH
T ss_pred             -CCCEEEEChhc-----CCCChHHh---CHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEccccccCCCC---cHHHH
Confidence             79999999987     33344443   4577899999999998888876    456789999999887654   68999


Q ss_pred             hHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHH--Hh-hcCCCC
Q 021960          185 SKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEF--VS-GLGNLK  261 (305)
Q Consensus       185 sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~  261 (305)
                      ||...+.++.+.+...+..+.++.+|.-|.|.-.- .+.++                   -..++++.-  +. ......
T Consensus       141 tKrlaE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~-GSVip-------------------~F~~Qi~~g~PlTvT~p~mt  200 (293)
T PF02719_consen  141 TKRLAEKLVQAANQYSGNSDTKFSSVRFGNVLGSR-GSVIP-------------------LFKKQIKNGGPLTVTDPDMT  200 (293)
T ss_dssp             HHHHHHHHHHHHCCTSSSS--EEEEEEE-EETTGT-TSCHH-------------------HHHHHHHTTSSEEECETT-E
T ss_pred             HHHHHHHHHHHHhhhCCCCCcEEEEEEecceecCC-CcHHH-------------------HHHHHHHcCCcceeCCCCcE
Confidence            99999999999999877778899999998874421 00000                   011111110  00 001112


Q ss_pred             CCCCCHHHHHHHHHHhccCCCCceeccEEEecCCcc
Q 021960          262 GTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT  297 (305)
Q Consensus       262 ~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~  297 (305)
                      +-+++++|.++.++..+.-.   ..|+++..|=|..
T Consensus       201 Rffmti~EAv~Lvl~a~~~~---~~geifvl~mg~~  233 (293)
T PF02719_consen  201 RFFMTIEEAVQLVLQAAALA---KGGEIFVLDMGEP  233 (293)
T ss_dssp             EEEE-HHHHHHHHHHHHHH-----TTEEEEE---TC
T ss_pred             EEEecHHHHHHHHHHHHhhC---CCCcEEEecCCCC
Confidence            33568999999988877543   3688888887654

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=99.69  E-value=1.3e-15  Score=131.44  Aligned_cols=156  Identities=21%  Similarity=0.180  Sum_probs=119.5

Q ss_pred             CEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEEE
Q 021960           32 KVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILY  111 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~li  111 (305)
                      +++|||||.|-||++++.+|++.|+.|++++.-..........   ..+.++..|+.|.+.+++++++.     +||.||
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~---~~~~f~~gDi~D~~~L~~vf~~~-----~idaVi   72 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLK---LQFKFYEGDLLDRALLTAVFEEN-----KIDAVV   72 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhh---ccCceEEeccccHHHHHHHHHhc-----CCCEEE
Confidence            4789999999999999999999999999998765543332211   11578999999988888877764     799999


Q ss_pred             EcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCC------------CC
Q 021960          112 NNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGL------------GP  179 (305)
Q Consensus       112 ~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~------------~~  179 (305)
                      |.||....+        .+.++..+.++.|+.++..|++++..    .+-.+||| ||.++..+.|            ..
T Consensus        73 HFAa~~~Vg--------ESv~~Pl~Yy~NNv~gTl~Ll~am~~----~gv~~~vF-SStAavYG~p~~~PI~E~~~~~p~  139 (329)
T COG1087          73 HFAASISVG--------ESVQNPLKYYDNNVVGTLNLIEAMLQ----TGVKKFIF-SSTAAVYGEPTTSPISETSPLAPI  139 (329)
T ss_pred             ECccccccc--------hhhhCHHHHHhhchHhHHHHHHHHHH----hCCCEEEE-ecchhhcCCCCCcccCCCCCCCCC
Confidence            999975442        36677889999999999888877654    44455666 6666665533            34


Q ss_pred             ccchhhHHHHHHHHHHHHHHHCcCCcEEEEEe
Q 021960          180 HAYTASKHAIVGLTKNAACELGRYGIRVNCIS  211 (305)
Q Consensus       180 ~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~  211 (305)
                      .+||.||.+.|.+.+.+++..   +.++..+.
T Consensus       140 NPYG~sKlm~E~iL~d~~~a~---~~~~v~LR  168 (329)
T COG1087         140 NPYGRSKLMSEEILRDAAKAN---PFKVVILR  168 (329)
T ss_pred             CcchhHHHHHHHHHHHHHHhC---CCcEEEEE
Confidence            699999999999999999885   35544443

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=99.68  E-value=1.7e-15  Score=138.62  Aligned_cols=225  Identities=15%  Similarity=0.134  Sum_probs=146.6

Q ss_pred             CEEEEecCCCchHHHHHHHHHHc-CCeEEEEecCcchhhhHhhhcCCCCeEEEEecCC-CHHHHHHHHHHHHHhcCCccE
Q 021960           32 KVAIITGGARGIGEAAVRLFARH-GAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVS-LEEDIENLINSTVSRYGRLDI  109 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~-g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~-d~~~i~~~~~~~~~~~g~id~  109 (305)
                      +++|||||+|.||++++++|+++ |++|+.++|+.....   .......+.++.+|++ +.+.+.++++       ++|+
T Consensus         2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~---~~~~~~~~~~~~~Dl~~~~~~~~~~~~-------~~d~   71 (347)
T PRK11908          2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLG---DLVNHPRMHFFEGDITINKEWIEYHVK-------KCDV   71 (347)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHH---HhccCCCeEEEeCCCCCCHHHHHHHHc-------CCCE
Confidence            47999999999999999999986 699999988653322   1222345889999998 6666555443       5899


Q ss_pred             EEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCC-------------
Q 021960          110 LYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGG-------------  176 (305)
Q Consensus       110 li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~-------------  176 (305)
                      |||+|+.....    .    ..++.+..+++|+.++.++++++..    .+ .++|++||...+-..             
T Consensus        72 ViH~aa~~~~~----~----~~~~p~~~~~~n~~~~~~ll~aa~~----~~-~~~v~~SS~~vyg~~~~~~~~ee~~~~~  138 (347)
T PRK11908         72 ILPLVAIATPA----T----YVKQPLRVFELDFEANLPIVRSAVK----YG-KHLVFPSTSEVYGMCPDEEFDPEASPLV  138 (347)
T ss_pred             EEECcccCChH----H----hhcCcHHHHHHHHHHHHHHHHHHHh----cC-CeEEEEecceeeccCCCcCcCccccccc
Confidence            99999864221    0    1233456789999998887777643    33 589999997543210             


Q ss_pred             -----CCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHH-HHH
Q 021960          177 -----LGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEV-RKM  250 (305)
Q Consensus       177 -----~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  250 (305)
                           .....|+.+|.+.+.+++.++.+   .++.+..+.|+.+..+............             ...+ ..+
T Consensus       139 ~~~~~~p~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilR~~~v~Gp~~~~~~~~~~~~-------------~~~i~~~~  202 (347)
T PRK11908        139 YGPINKPRWIYACSKQLMDRVIWAYGME---EGLNFTLFRPFNWIGPGLDSIYTPKEGS-------------SRVVTQFL  202 (347)
T ss_pred             cCcCCCccchHHHHHHHHHHHHHHHHHH---cCCCeEEEeeeeeeCCCccCCCccccCC-------------cchHHHHH
Confidence                 01236999999999999888765   4788888999888776421110000000             0000 011


Q ss_pred             HHHHhh-------cCCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCC
Q 021960          251 EEFVSG-------LGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGG  295 (305)
Q Consensus       251 ~~~~~~-------~~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG  295 (305)
                      ......       -+.....++..+|++++++.++........|+++++.++
T Consensus       203 ~~~~~~~~~~~~~~g~~~r~~i~v~D~a~a~~~~~~~~~~~~~g~~yni~~~  254 (347)
T PRK11908        203 GHIVRGEPISLVDGGSQKRAFTDIDDGIDALMKIIENKDGVASGKIYNIGNP  254 (347)
T ss_pred             HHHhCCCceEEecCCceeeccccHHHHHHHHHHHHhCccccCCCCeEEeCCC
Confidence            111100       012344678999999999998876432245889999774

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.67  E-value=1.6e-14  Score=143.17  Aligned_cols=229  Identities=19%  Similarity=0.126  Sum_probs=150.3

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHc--CCeEEEEecCcc--hhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           29 LEGKVAIITGGARGIGEAAVRLFARH--GAKVVIADVEDT--LGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        29 l~~k~vlVtGas~giG~~ia~~l~~~--g~~vv~~~r~~~--~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      .++|+||||||+|.||+++++.|+++  +++|+.+++...  ....+.......++.++.+|++|.+.++.++..     
T Consensus         4 ~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~-----   78 (668)
T PLN02260          4 YEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIASADLVNYLLIT-----   78 (668)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhcccCCCeEEEECCCCChHHHHHHHhh-----
Confidence            45789999999999999999999988  678888877431  111111111234588999999998877765432     


Q ss_pred             CCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-CCEEEEecccccccC--------
Q 021960          105 GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRG-GGCIISTASVAGVMG--------  175 (305)
Q Consensus       105 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~--------  175 (305)
                      ..+|+|||+|+.....        ....+..+.+++|+.++.++++++..    .+ ..++|++||...+-.        
T Consensus        79 ~~~D~ViHlAa~~~~~--------~~~~~~~~~~~~Nv~gt~~ll~a~~~----~~~vkr~I~~SS~~vyg~~~~~~~~~  146 (668)
T PLN02260         79 EGIDTIMHFAAQTHVD--------NSFGNSFEFTKNNIYGTHVLLEACKV----TGQIRRFIHVSTDEVYGETDEDADVG  146 (668)
T ss_pred             cCCCEEEECCCccCch--------hhhhCHHHHHHHHHHHHHHHHHHHHh----cCCCcEEEEEcchHHhCCCccccccC
Confidence            2699999999975321        12233456789999998888877643    33 468999999653311        


Q ss_pred             ------CCCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHH
Q 021960          176 ------GLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRK  249 (305)
Q Consensus       176 ------~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (305)
                            ......|+.+|.+.+.+++.++.+   .++.+..+.|+.+..+....   .     .       .+  ...+..
T Consensus       147 ~~E~~~~~p~~~Y~~sK~~aE~~v~~~~~~---~~l~~vilR~~~VyGp~~~~---~-----~-------~i--~~~~~~  206 (668)
T PLN02260        147 NHEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFP---E-----K-------LI--PKFILL  206 (668)
T ss_pred             ccccCCCCCCCCcHHHHHHHHHHHHHHHHH---cCCCEEEECcccccCcCCCc---c-----c-------HH--HHHHHH
Confidence                  112457999999999999988766   47889999999887764210   0     0       00  000000


Q ss_pred             HHH--HHh--hcCCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCcc
Q 021960          250 MEE--FVS--GLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT  297 (305)
Q Consensus       250 ~~~--~~~--~~~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~  297 (305)
                      ...  ...  .-+.....++..+|+++++..++...   ..|.++++.++..
T Consensus       207 a~~g~~i~i~g~g~~~r~~ihV~Dva~a~~~~l~~~---~~~~vyni~~~~~  255 (668)
T PLN02260        207 AMQGKPLPIHGDGSNVRSYLYCEDVAEAFEVVLHKG---EVGHVYNIGTKKE  255 (668)
T ss_pred             HhCCCCeEEecCCCceEeeEEHHHHHHHHHHHHhcC---CCCCEEEECCCCe
Confidence            000  000  00112234678999999999887643   2478889877654

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=99.67  E-value=6.6e-15  Score=145.43  Aligned_cols=232  Identities=16%  Similarity=0.109  Sum_probs=149.9

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHc-CCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHH-HHHHHHHHHHhcCCc
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARH-GAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEED-IENLINSTVSRYGRL  107 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~-g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~-i~~~~~~~~~~~g~i  107 (305)
                      .+++||||||+|.||+++++.|+++ |++|+.++|.......   .....++.++.+|++|..+ ++++++       .+
T Consensus       314 ~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~---~~~~~~~~~~~gDl~d~~~~l~~~l~-------~~  383 (660)
T PRK08125        314 RRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISR---FLGHPRFHFVEGDISIHSEWIEYHIK-------KC  383 (660)
T ss_pred             cCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhh---hcCCCceEEEeccccCcHHHHHHHhc-------CC
Confidence            4779999999999999999999985 7999999987543221   1223458889999998654 343332       58


Q ss_pred             cEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCC-----------
Q 021960          108 DILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGG-----------  176 (305)
Q Consensus       108 d~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~-----------  176 (305)
                      |+|||+|+......        ..++.+..+++|+.++.++++++..    .+ .++|++||.+.+-..           
T Consensus       384 D~ViHlAa~~~~~~--------~~~~~~~~~~~Nv~~t~~ll~a~~~----~~-~~~V~~SS~~vyg~~~~~~~~E~~~~  450 (660)
T PRK08125        384 DVVLPLVAIATPIE--------YTRNPLRVFELDFEENLKIIRYCVK----YN-KRIIFPSTSEVYGMCTDKYFDEDTSN  450 (660)
T ss_pred             CEEEECccccCchh--------hccCHHHHHHhhHHHHHHHHHHHHh----cC-CeEEEEcchhhcCCCCCCCcCccccc
Confidence            99999999753210        1123345778999999888888764    23 589999996433110           


Q ss_pred             ----C---CCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHH
Q 021960          177 ----L---GPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRK  249 (305)
Q Consensus       177 ----~---~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (305)
                          +   ....|+.+|.+.+.+++.++++   +++++..+.|+.+..|..............         .....+..
T Consensus       451 ~~~~p~~~p~s~Yg~sK~~~E~~~~~~~~~---~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~---------~i~~~i~~  518 (660)
T PRK08125        451 LIVGPINKQRWIYSVSKQLLDRVIWAYGEK---EGLRFTLFRPFNWMGPRLDNLNAARIGSSR---------AITQLILN  518 (660)
T ss_pred             cccCCCCCCccchHHHHHHHHHHHHHHHHh---cCCceEEEEEceeeCCCccccccccccccc---------hHHHHHHH
Confidence                1   1236999999999999988766   479999999999887642110000000000         00000011


Q ss_pred             HHH--HHh--hcCCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCc
Q 021960          250 MEE--FVS--GLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGV  296 (305)
Q Consensus       250 ~~~--~~~--~~~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~  296 (305)
                      +..  ...  .-+.....++..+|++++++.++........|+++++.+|.
T Consensus       519 ~~~~~~i~~~g~g~~~rd~i~v~Dva~a~~~~l~~~~~~~~g~iyni~~~~  569 (660)
T PRK08125        519 LVEGSPIKLVDGGKQKRCFTDIRDGIEALFRIIENKDNRCDGQIINIGNPD  569 (660)
T ss_pred             hcCCCCeEEeCCCceeeceeeHHHHHHHHHHHHhccccccCCeEEEcCCCC
Confidence            000  000  00122345788999999998888654333468899998773

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=99.66  E-value=6.4e-15  Score=135.91  Aligned_cols=227  Identities=16%  Similarity=0.130  Sum_probs=146.5

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDI  109 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~  109 (305)
                      ++++||||||+|.||+++++.|.++|+.|++++|.....  ...  ....+.++.+|++|.+++..+++       .+|+
T Consensus        20 ~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~--~~~--~~~~~~~~~~Dl~d~~~~~~~~~-------~~D~   88 (370)
T PLN02695         20 EKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEH--MSE--DMFCHEFHLVDLRVMENCLKVTK-------GVDH   88 (370)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccc--ccc--ccccceEEECCCCCHHHHHHHHh-------CCCE
Confidence            578999999999999999999999999999998864321  110  01125678899999887766653       5899


Q ss_pred             EEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEeccccccc---------------
Q 021960          110 LYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVM---------------  174 (305)
Q Consensus       110 li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~---------------  174 (305)
                      |||+|+......    ...   ......+..|+.++.++++++..    .+..++|++||...+-               
T Consensus        89 Vih~Aa~~~~~~----~~~---~~~~~~~~~N~~~t~nll~aa~~----~~vk~~V~~SS~~vYg~~~~~~~~~~~~E~~  157 (370)
T PLN02695         89 VFNLAADMGGMG----FIQ---SNHSVIMYNNTMISFNMLEAARI----NGVKRFFYASSACIYPEFKQLETNVSLKESD  157 (370)
T ss_pred             EEEcccccCCcc----ccc---cCchhhHHHHHHHHHHHHHHHHH----hCCCEEEEeCchhhcCCccccCcCCCcCccc
Confidence            999998653211    111   11233466789988888877643    4456899999964221               


Q ss_pred             --CCCCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHH
Q 021960          175 --GGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEE  252 (305)
Q Consensus       175 --~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (305)
                        +......|+.+|.+.+.+++.++..   .++.+..+.|+.+..|...  +.....          ..+ ......+..
T Consensus       158 ~~p~~p~s~Yg~sK~~~E~~~~~~~~~---~g~~~~ilR~~~vyGp~~~--~~~~~~----------~~~-~~~~~~~~~  221 (370)
T PLN02695        158 AWPAEPQDAYGLEKLATEELCKHYTKD---FGIECRIGRFHNIYGPFGT--WKGGRE----------KAP-AAFCRKALT  221 (370)
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCCEEEEEECCccCCCCC--cccccc----------ccH-HHHHHHHHc
Confidence              2223458999999999999887665   4799999999998876311  100000          000 011111100


Q ss_pred             HHhh-----cCCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          253 FVSG-----LGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       253 ~~~~-----~~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      ....     -+.....++..+|+++++++++...    .+.++++-+|..+
T Consensus       222 ~~~~i~~~g~g~~~r~~i~v~D~a~ai~~~~~~~----~~~~~nv~~~~~~  268 (370)
T PLN02695        222 STDEFEMWGDGKQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEMV  268 (370)
T ss_pred             CCCCeEEeCCCCeEEeEEeHHHHHHHHHHHHhcc----CCCceEecCCCce
Confidence            0000     0122344678999999999887653    2567888777543

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.66  E-value=1.4e-14  Score=134.36  Aligned_cols=216  Identities=14%  Similarity=0.124  Sum_probs=139.8

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhh---Hhhh-cCCCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           29 LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSV---LAST-LAPAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        29 l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~---~~~~-~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      .+++++|||||+|+||+++++.|+++|++|+++.|+......   ..+. .....+.++.+|++|.++++++++..   .
T Consensus        58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~---~  134 (390)
T PLN02657         58 PKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSE---G  134 (390)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHh---C
Confidence            357899999999999999999999999999999987643210   0000 11235889999999999999887643   1


Q ss_pred             CCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchh
Q 021960          105 GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTA  184 (305)
Q Consensus       105 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~  184 (305)
                      .++|+||||++....     .    .    ...+++|+.+..++++.+.    +.+.+++|++||.+...   ....|..
T Consensus       135 ~~~D~Vi~~aa~~~~-----~----~----~~~~~vn~~~~~~ll~aa~----~~gv~r~V~iSS~~v~~---p~~~~~~  194 (390)
T PLN02657        135 DPVDVVVSCLASRTG-----G----V----KDSWKIDYQATKNSLDAGR----EVGAKHFVLLSAICVQK---PLLEFQR  194 (390)
T ss_pred             CCCcEEEECCccCCC-----C----C----ccchhhHHHHHHHHHHHHH----HcCCCEEEEEeeccccC---cchHHHH
Confidence            169999999885321     0    0    1224567777766666553    45567899999987543   3456888


Q ss_pred             hHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCC-CCC
Q 021960          185 SKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNL-KGT  263 (305)
Q Consensus       185 sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  263 (305)
                      +|...+...+.     ...++....+.|+.+..++... +..          ...+.+..        .... +.. ...
T Consensus       195 sK~~~E~~l~~-----~~~gl~~tIlRp~~~~~~~~~~-~~~----------~~~g~~~~--------~~Gd-G~~~~~~  249 (390)
T PLN02657        195 AKLKFEAELQA-----LDSDFTYSIVRPTAFFKSLGGQ-VEI----------VKDGGPYV--------MFGD-GKLCACK  249 (390)
T ss_pred             HHHHHHHHHHh-----ccCCCCEEEEccHHHhcccHHH-HHh----------hccCCceE--------EecC-CcccccC
Confidence            99988877654     2358999999998775433110 000          00000000        0000 011 112


Q ss_pred             CCCHHHHHHHHHHhccCCCCceeccEEEecC
Q 021960          264 TLRSKDIAEAALYLASDESRYVSGHNLVVDG  294 (305)
Q Consensus       264 ~~~~~dva~~v~~l~s~~~~~~tG~~i~idg  294 (305)
                      .+..+|+|..+..++.+..  ..|+++++.|
T Consensus       250 ~I~v~DlA~~i~~~~~~~~--~~~~~~~Igg  278 (390)
T PLN02657        250 PISEADLASFIADCVLDES--KINKVLPIGG  278 (390)
T ss_pred             ceeHHHHHHHHHHHHhCcc--ccCCEEEcCC
Confidence            4678899999888875432  2578888876

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=99.65  E-value=9.5e-15  Score=131.34  Aligned_cols=219  Identities=17%  Similarity=0.183  Sum_probs=138.7

Q ss_pred             EEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHH--hcCCccEEE
Q 021960           34 AIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVS--RYGRLDILY  111 (305)
Q Consensus        34 vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~--~~g~id~li  111 (305)
                      +|||||+|.||++++++|+++|+.++++.++.......        .....+|+.|..+.+.+++.+.+  .++++|+||
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~--------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~Vi   73 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF--------VNLVDLDIADYMDKEDFLAQIMAGDDFGDIEAIF   73 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHH--------HhhhhhhhhhhhhHHHHHHHHhcccccCCccEEE
Confidence            79999999999999999999999766554443221111        11244677777666666665543  245799999


Q ss_pred             EcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccC-----------CCCCc
Q 021960          112 NNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMG-----------GLGPH  180 (305)
Q Consensus       112 ~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~-----------~~~~~  180 (305)
                      |+||.....       +.+   .+..++.|+.++.++++.+..    .+ .++|++||.+.+-.           .....
T Consensus        74 h~A~~~~~~-------~~~---~~~~~~~n~~~t~~ll~~~~~----~~-~~~i~~SS~~vyg~~~~~~~~E~~~~~p~~  138 (308)
T PRK11150         74 HEGACSSTT-------EWD---GKYMMDNNYQYSKELLHYCLE----RE-IPFLYASSAATYGGRTDDFIEEREYEKPLN  138 (308)
T ss_pred             ECceecCCc-------CCC---hHHHHHHHHHHHHHHHHHHHH----cC-CcEEEEcchHHhCcCCCCCCccCCCCCCCC
Confidence            999864321       112   234689999998888887643    33 37999999754321           11235


Q ss_pred             cchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcH--HHHHHHHHH-----
Q 021960          181 AYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQ--KEVRKMEEF-----  253 (305)
Q Consensus       181 ~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-----  253 (305)
                      .|+.+|.+.+.+++.++.+   .++.+..+.|+.+..+.....  .             .++.-  .....+..-     
T Consensus       139 ~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~vyG~~~~~~--~-------------~~~~~~~~~~~~~~~~~~~~i  200 (308)
T PRK11150        139 VYGYSKFLFDEYVRQILPE---ANSQICGFRYFNVYGPREGHK--G-------------SMASVAFHLNNQLNNGENPKL  200 (308)
T ss_pred             HHHHHHHHHHHHHHHHHHH---cCCCEEEEeeeeecCCCCCCC--C-------------ccchhHHHHHHHHhcCCCCEE
Confidence            7999999999998887655   478999999998877642110  0             00000  000111100     


Q ss_pred             HhhcCCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCcc
Q 021960          254 VSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT  297 (305)
Q Consensus       254 ~~~~~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~  297 (305)
                      ...-......++.++|++++++.++...    .+.++++-+|..
T Consensus       201 ~~g~~~~~r~~i~v~D~a~a~~~~~~~~----~~~~yni~~~~~  240 (308)
T PRK11150        201 FEGSENFKRDFVYVGDVAAVNLWFWENG----VSGIFNCGTGRA  240 (308)
T ss_pred             ecCCCceeeeeeeHHHHHHHHHHHHhcC----CCCeEEcCCCCc
Confidence            0000112345679999999988887653    245888877754

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.64  E-value=3.6e-14  Score=127.49  Aligned_cols=217  Identities=22%  Similarity=0.209  Sum_probs=146.9

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCc-cEEE
Q 021960           33 VAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRL-DILY  111 (305)
Q Consensus        33 ~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~i-d~li  111 (305)
                      .||||||+|.||+++++.|.++|+.|+.++|.........     ..+.++.+|++|.+.+...++       .. |.||
T Consensus         2 ~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~d~~~~~~~~~~~~-------~~~d~vi   69 (314)
T COG0451           2 RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL-----SGVEFVVLDLTDRDLVDELAK-------GVPDAVI   69 (314)
T ss_pred             eEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc-----cccceeeecccchHHHHHHHh-------cCCCEEE
Confidence            3899999999999999999999999999998765443221     347789999999855555544       23 9999


Q ss_pred             EcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCC-----------CCC-
Q 021960          112 NNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGG-----------LGP-  179 (305)
Q Consensus       112 ~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~-----------~~~-  179 (305)
                      |+|+......     .. .. .....+.+|+.++.++++++..    .+..++|+.||.+...+.           +.. 
T Consensus        70 h~aa~~~~~~-----~~-~~-~~~~~~~~nv~gt~~ll~aa~~----~~~~~~v~~ss~~~~~~~~~~~~~~E~~~~~~p  138 (314)
T COG0451          70 HLAAQSSVPD-----SN-AS-DPAEFLDVNVDGTLNLLEAARA----AGVKRFVFASSVSVVYGDPPPLPIDEDLGPPRP  138 (314)
T ss_pred             EccccCchhh-----hh-hh-CHHHHHHHHHHHHHHHHHHHHH----cCCCeEEEeCCCceECCCCCCCCcccccCCCCC
Confidence            9999764321     00 11 3456889999999888888765    456789996664533321           111 


Q ss_pred             -ccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcC
Q 021960          180 -HAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLG  258 (305)
Q Consensus       180 -~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (305)
                       ..|+.+|.+.+.+++..+.   ..++.+..+.|+.+..+.....+..                 ......+........
T Consensus       139 ~~~Yg~sK~~~E~~~~~~~~---~~~~~~~ilR~~~vyGp~~~~~~~~-----------------~~~~~~~~~~~~~~~  198 (314)
T COG0451         139 LNPYGVSKLAAEQLLRAYAR---LYGLPVVILRPFNVYGPGDKPDLSS-----------------GVVSAFIRQLLKGEP  198 (314)
T ss_pred             CCHHHHHHHHHHHHHHHHHH---HhCCCeEEEeeeeeeCCCCCCCCCc-----------------CcHHHHHHHHHhCCC
Confidence             1499999999999999887   4689999999998877764332111                 000000111111111


Q ss_pred             --------CCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCc
Q 021960          259 --------NLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGV  296 (305)
Q Consensus       259 --------~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~  296 (305)
                              .....++..+|+++++..++.....   + .+++.++.
T Consensus       199 ~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~---~-~~ni~~~~  240 (314)
T COG0451         199 IIVIGGDGSQTRDFVYVDDVADALLLALENPDG---G-VFNIGSGT  240 (314)
T ss_pred             cceEeCCCceeEeeEeHHHHHHHHHHHHhCCCC---c-EEEeCCCC
Confidence                    1112356799999999999987643   2 78877764

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=99.64  E-value=1.1e-13  Score=108.79  Aligned_cols=217  Identities=22%  Similarity=0.224  Sum_probs=153.9

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhc--CCcc
Q 021960           31 GKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRY--GRLD  108 (305)
Q Consensus        31 ~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~--g~id  108 (305)
                      -..|+|-||-|.+|.++++.|.+++|-|.-++..+......        -..+..|-+=.++-+.+++++-+..  .++|
T Consensus         3 agrVivYGGkGALGSacv~~FkannywV~siDl~eNe~Ad~--------sI~V~~~~swtEQe~~v~~~vg~sL~gekvD   74 (236)
T KOG4022|consen    3 AGRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQADS--------SILVDGNKSWTEQEQSVLEQVGSSLQGEKVD   74 (236)
T ss_pred             CceEEEEcCcchHhHHHHHHHHhcCeEEEEEeecccccccc--------eEEecCCcchhHHHHHHHHHHHHhhcccccc
Confidence            45789999999999999999999999998888765432211        2234444444577777777776543  3699


Q ss_pred             EEEEcCCCCCCCCCC-CcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhHH
Q 021960          109 ILYNNAGVLGNQRKH-KSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKH  187 (305)
Q Consensus       109 ~li~nag~~~~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKa  187 (305)
                      .|+|-||.+..++.. +++.    +.-+-++.-.+.......+....++  +.+|-+-..+..++.-+.|++..|+++|+
T Consensus        75 av~CVAGGWAGGnAksKdl~----KNaDLMwKQSvwtSaIsa~lAt~HL--K~GGLL~LtGAkaAl~gTPgMIGYGMAKa  148 (236)
T KOG4022|consen   75 AVFCVAGGWAGGNAKSKDLV----KNADLMWKQSVWTSAISAKLATTHL--KPGGLLQLTGAKAALGGTPGMIGYGMAKA  148 (236)
T ss_pred             eEEEeeccccCCCcchhhhh----hchhhHHHHHHHHHHHHHHHHHhcc--CCCceeeecccccccCCCCcccchhHHHH
Confidence            999999987665421 1111    1111122222222222233333333  45677777788888899999999999999


Q ss_pred             HHHHHHHHHHHHHC--cCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCC
Q 021960          188 AIVGLTKNAACELG--RYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL  265 (305)
Q Consensus       188 a~~~~~~~la~e~~--~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (305)
                      |++.++++|+.+-.  +.|--+.+|.|=.+||||.++.++.                                ...+.+.
T Consensus       149 AVHqLt~SLaak~SGlP~gsaa~~ilPVTLDTPMNRKwMP~--------------------------------ADfssWT  196 (236)
T KOG4022|consen  149 AVHQLTSSLAAKDSGLPDGSAALTILPVTLDTPMNRKWMPN--------------------------------ADFSSWT  196 (236)
T ss_pred             HHHHHHHHhcccccCCCCCceeEEEeeeeccCccccccCCC--------------------------------CcccCcc
Confidence            99999999998854  5678889999999999998887765                                2345566


Q ss_pred             CHHHHHHHHHHhccCCCCceeccEEEec
Q 021960          266 RSKDIAEAALYLASDESRYVSGHNLVVD  293 (305)
Q Consensus       266 ~~~dva~~v~~l~s~~~~~~tG~~i~id  293 (305)
                      +.+.+++..+....+..|.-+|+.+.+-
T Consensus       197 PL~fi~e~flkWtt~~~RPssGsLlqi~  224 (236)
T KOG4022|consen  197 PLSFISEHFLKWTTETSRPSSGSLLQIT  224 (236)
T ss_pred             cHHHHHHHHHHHhccCCCCCCCceEEEE
Confidence            7788888888888887788889887653

>PLN02206 UDP-glucuronate decarboxylase

Probab=99.63  E-value=5.1e-14  Score=132.48  Aligned_cols=220  Identities=16%  Similarity=0.104  Sum_probs=141.5

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcch-hhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCC
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTL-GSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGR  106 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~-~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~  106 (305)
                      ..++++||||||+|.||+++++.|+++|++|+++++.... .+.........++.++..|+.+..     +       ..
T Consensus       116 ~~~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~~~~~~~~~~i~~D~~~~~-----l-------~~  183 (442)
T PLN02206        116 KRKGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHHFSNPNFELIRHDVVEPI-----L-------LE  183 (442)
T ss_pred             ccCCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhhhccCCceEEEECCccChh-----h-------cC
Confidence            3357899999999999999999999999999988764221 111111222345788888987641     1       15


Q ss_pred             ccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEeccccccc------------
Q 021960          107 LDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVM------------  174 (305)
Q Consensus       107 id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~------------  174 (305)
                      +|+|||+|+.....        ...++..+.+++|+.++.++++++..    .+ .++|++||...+-            
T Consensus       184 ~D~ViHlAa~~~~~--------~~~~~p~~~~~~Nv~gt~nLleaa~~----~g-~r~V~~SS~~VYg~~~~~p~~E~~~  250 (442)
T PLN02206        184 VDQIYHLACPASPV--------HYKFNPVKTIKTNVVGTLNMLGLAKR----VG-ARFLLTSTSEVYGDPLQHPQVETYW  250 (442)
T ss_pred             CCEEEEeeeecchh--------hhhcCHHHHHHHHHHHHHHHHHHHHH----hC-CEEEEECChHHhCCCCCCCCCcccc
Confidence            89999999864321        01123467889999999988887754    33 4899999976442            


Q ss_pred             ----CCCCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHH
Q 021960          175 ----GGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKM  250 (305)
Q Consensus       175 ----~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (305)
                          +......|+.+|.+.+.+++.+...   .++.+..+.|+.+..+.....  .   . .         -....   +
T Consensus       251 ~~~~P~~~~s~Y~~SK~~aE~~~~~y~~~---~g~~~~ilR~~~vyGp~~~~~--~---~-~---------~v~~~---i  309 (442)
T PLN02206        251 GNVNPIGVRSCYDEGKRTAETLTMDYHRG---ANVEVRIARIFNTYGPRMCID--D---G-R---------VVSNF---V  309 (442)
T ss_pred             ccCCCCCccchHHHHHHHHHHHHHHHHHH---hCCCeEEEEeccccCCCCCcc--c---c-c---------hHHHH---H
Confidence                1112457999999999998887655   478888899887766531100  0   0 0         00001   1


Q ss_pred             HHHHhh-----c--CCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCcc
Q 021960          251 EEFVSG-----L--GNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT  297 (305)
Q Consensus       251 ~~~~~~-----~--~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~  297 (305)
                      ......     +  +.....++..+|+|++++.++...   . +..+++.+|..
T Consensus       310 ~~~l~~~~i~i~g~G~~~rdfi~V~Dva~ai~~a~e~~---~-~g~yNIgs~~~  359 (442)
T PLN02206        310 AQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGE---H-VGPFNLGNPGE  359 (442)
T ss_pred             HHHHcCCCcEEeCCCCEEEeEEeHHHHHHHHHHHHhcC---C-CceEEEcCCCc
Confidence            111110     0  111234678999999998887643   2 34788876653

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=99.62  E-value=2.6e-14  Score=128.15  Aligned_cols=211  Identities=17%  Similarity=0.149  Sum_probs=137.3

Q ss_pred             EEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEEEEcC
Q 021960           35 IITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNA  114 (305)
Q Consensus        35 lVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~li~na  114 (305)
                      |||||+|.||+++++.|+++|+.|+++.+.                  ..+|++|.++++++++..     ++|+|||+|
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~------------------~~~Dl~~~~~l~~~~~~~-----~~d~Vih~A   57 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH------------------KELDLTRQADVEAFFAKE-----KPTYVILAA   57 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeecc------------------ccCCCCCHHHHHHHHhcc-----CCCEEEEee
Confidence            699999999999999999999988766432                  137999999888877653     589999999


Q ss_pred             CCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCC-------------C--C-
Q 021960          115 GVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGG-------------L--G-  178 (305)
Q Consensus       115 g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~-------------~--~-  178 (305)
                      +.....     .  ...+.....++.|+.++..+++.+..    .+..++|++||..-+.+.             +  . 
T Consensus        58 ~~~~~~-----~--~~~~~~~~~~~~n~~~~~~ll~~~~~----~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~p~  126 (306)
T PLN02725         58 AKVGGI-----H--ANMTYPADFIRENLQIQTNVIDAAYR----HGVKKLLFLGSSCIYPKFAPQPIPETALLTGPPEPT  126 (306)
T ss_pred             eeeccc-----c--hhhhCcHHHHHHHhHHHHHHHHHHHH----cCCCeEEEeCceeecCCCCCCCCCHHHhccCCCCCC
Confidence            864210     0  01122345678899998888877754    445689999996543211             1  1 


Q ss_pred             CccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHH-HHhh-
Q 021960          179 PHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEE-FVSG-  256 (305)
Q Consensus       179 ~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-  256 (305)
                      ...|+.+|.+.+.+++.+.+++   ++++..+.|+.+..+....  ... ..        ..+  ...+..+.. .... 
T Consensus       127 ~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~R~~~vyG~~~~~--~~~-~~--------~~~--~~~i~~~~~~~~~~~  190 (306)
T PLN02725        127 NEWYAIAKIAGIKMCQAYRIQY---GWDAISGMPTNLYGPHDNF--HPE-NS--------HVI--PALIRRFHEAKANGA  190 (306)
T ss_pred             cchHHHHHHHHHHHHHHHHHHh---CCCEEEEEecceeCCCCCC--CCC-CC--------ccc--HHHHHHHHHHhhcCC
Confidence            2249999999999988877663   7899999999987764110  000 00        000  011111100 0000 


Q ss_pred             -----c--CCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          257 -----L--GNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       257 -----~--~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                           +  +.+...++.++|++++++.++....   .+..+++.+|...
T Consensus       191 ~~~~~~~~g~~~~~~i~v~Dv~~~~~~~~~~~~---~~~~~ni~~~~~~  236 (306)
T PLN02725        191 PEVVVWGSGSPLREFLHVDDLADAVVFLMRRYS---GAEHVNVGSGDEV  236 (306)
T ss_pred             CeEEEcCCCCeeeccccHHHHHHHHHHHHhccc---cCcceEeCCCCcc
Confidence                 0  1223467899999999999887532   3455688777543

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=99.61  E-value=8.3e-14  Score=125.30  Aligned_cols=221  Identities=16%  Similarity=0.178  Sum_probs=139.2

Q ss_pred             EEEecCCCchHHHHHHHHHHcCC-eEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEEEE
Q 021960           34 AIITGGARGIGEAAVRLFARHGA-KVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILYN  112 (305)
Q Consensus        34 vlVtGas~giG~~ia~~l~~~g~-~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~li~  112 (305)
                      ||||||+|.||.++++.|.++|+ .|++++|..... ..... .   ...+..|+++.+.++.+.+.   .+.++|+|||
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~~~~~-~---~~~~~~d~~~~~~~~~~~~~---~~~~~D~vvh   72 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-KFLNL-A---DLVIADYIDKEDFLDRLEKG---AFGKIEAIFH   72 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-hhhhh-h---heeeeccCcchhHHHHHHhh---ccCCCCEEEE
Confidence            58999999999999999999998 688877654322 11111 1   13456788887666655442   2357999999


Q ss_pred             cCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccC-----------CCCCcc
Q 021960          113 NAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMG-----------GLGPHA  181 (305)
Q Consensus       113 nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~-----------~~~~~~  181 (305)
                      +|+....          +.++.+..+++|+.++.++++.+..    .+ .++|++||...+-.           ......
T Consensus        73 ~A~~~~~----------~~~~~~~~~~~n~~~~~~ll~~~~~----~~-~~~v~~SS~~vy~~~~~~~~e~~~~~~p~~~  137 (314)
T TIGR02197        73 QGACSDT----------TETDGEYMMENNYQYSKRLLDWCAE----KG-IPFIYASSAATYGDGEAGFREGRELERPLNV  137 (314)
T ss_pred             CccccCc----------cccchHHHHHHHHHHHHHHHHHHHH----hC-CcEEEEccHHhcCCCCCCcccccCcCCCCCH
Confidence            9986321          2234566789999999888887654    33 47999999654321           114567


Q ss_pred             chhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhh-----
Q 021960          182 YTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSG-----  256 (305)
Q Consensus       182 Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----  256 (305)
                      |+.+|.+.+.+++....+. ..++.+..+.|+.+..+.....  .             .... -....+......     
T Consensus       138 Y~~sK~~~e~~~~~~~~~~-~~~~~~~~lR~~~vyG~~~~~~--~-------------~~~~-~~~~~~~~~~~~~~~~~  200 (314)
T TIGR02197       138 YGYSKFLFDQYVRRRVLPE-ALSAQVVGLRYFNVYGPREYHK--G-------------KMAS-VAFHLFNQIKAGGNVKL  200 (314)
T ss_pred             HHHHHHHHHHHHHHHhHhh-ccCCceEEEEEeeccCCCCCCC--C-------------Cccc-HHHHHHHHHhcCCCeEE
Confidence            9999999999998643321 2357888888888776531100  0             0000 000000110000     


Q ss_pred             --------cCCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          257 --------LGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       257 --------~~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                              -+.....++..+|++++++.++...    .+.++++.++...
T Consensus       201 ~~~~~~~~~g~~~~~~i~v~D~a~~i~~~~~~~----~~~~yni~~~~~~  246 (314)
T TIGR02197       201 FKSSEGFKDGEQLRDFVYVKDVVDVNLWLLENG----VSGIFNLGTGRAR  246 (314)
T ss_pred             ecCccccCCCCceeeeEEHHHHHHHHHHHHhcc----cCceEEcCCCCCc
Confidence                    0112235678999999999988762    4568888777543

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=99.60  E-value=8.4e-14  Score=123.79  Aligned_cols=199  Identities=18%  Similarity=0.128  Sum_probs=132.5

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEEEE
Q 021960           33 VAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILYN  112 (305)
Q Consensus        33 ~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~li~  112 (305)
                      ++|||||+|.||.+++++|.++|++|+++.|.                   .+|+.|.++++++++..     ++|+|||
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~-------------------~~d~~~~~~~~~~~~~~-----~~d~vi~   56 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGRVVVALTSS-------------------QLDLTDPEALERLLRAI-----RPDAVVN   56 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc-------------------ccCCCCHHHHHHHHHhC-----CCCEEEE
Confidence            37999999999999999999999999988874                   36999999998887653     5899999


Q ss_pred             cCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccC-----------CCCCcc
Q 021960          113 NAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMG-----------GLGPHA  181 (305)
Q Consensus       113 nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~-----------~~~~~~  181 (305)
                      +||.....        ......+..+++|+.++.++++.+..    .+ .++|++||.+.+.+           ......
T Consensus        57 ~a~~~~~~--------~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~  123 (287)
T TIGR01214        57 TAAYTDVD--------GAESDPEKAFAVNALAPQNLARAAAR----HG-ARLVHISTDYVFDGEGKRPYREDDATNPLNV  123 (287)
T ss_pred             CCcccccc--------ccccCHHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEeeeeeecCCCCCCCCCCCCCCCcch
Confidence            99864221        11223456788999999888887643    33 48999998654321           112457


Q ss_pred             chhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHH--HHhhcCC
Q 021960          182 YTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEE--FVSGLGN  259 (305)
Q Consensus       182 Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~  259 (305)
                      |+.+|.+.+.+++.+       +..+..+.|+.+..+.....+.                  ...+.....  .....+.
T Consensus       124 Y~~~K~~~E~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~------------------~~~~~~~~~~~~~~~~~~  178 (287)
T TIGR01214       124 YGQSKLAGEQAIRAA-------GPNALIVRTSWLYGGGGGRNFV------------------RTMLRLAGRGEELRVVDD  178 (287)
T ss_pred             hhHHHHHHHHHHHHh-------CCCeEEEEeeecccCCCCCCHH------------------HHHHHHhhcCCCceEecC
Confidence            999999999888764       3577899999987764110000                  000111100  0000111


Q ss_pred             CCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCC
Q 021960          260 LKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGG  295 (305)
Q Consensus       260 ~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG  295 (305)
                      ....+...+|+++++..++.... . -+.++++-++
T Consensus       179 ~~~~~v~v~Dva~a~~~~~~~~~-~-~~~~~ni~~~  212 (287)
T TIGR01214       179 QIGSPTYAKDLARVIAALLQRLA-R-ARGVYHLANS  212 (287)
T ss_pred             CCcCCcCHHHHHHHHHHHHhhcc-C-CCCeEEEECC
Confidence            22345678999999999886531 1 2456666544

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>CHL00194 ycf39 Ycf39; Provisional

Probab=99.60  E-value=8.5e-14  Score=125.81  Aligned_cols=207  Identities=15%  Similarity=0.081  Sum_probs=135.5

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEEEE
Q 021960           33 VAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILYN  112 (305)
Q Consensus        33 ~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~li~  112 (305)
                      +++||||||.||+++++.|+++|++|+++.|+........    ...+.++.+|++|.+++.++++       .+|+|||
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~----~~~v~~v~~Dl~d~~~l~~al~-------g~d~Vi~   70 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLK----EWGAELVYGDLSLPETLPPSFK-------GVTAIID   70 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHh----hcCCEEEECCCCCHHHHHHHHC-------CCCEEEE
Confidence            6999999999999999999999999999998754332221    2348899999999988877664       5899999


Q ss_pred             cCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhHHHHHHH
Q 021960          113 NAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGL  192 (305)
Q Consensus       113 nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~  192 (305)
                      +++....          +   ....+++|+.++.++++++..    .+-.++|++||..+..  .+...|..+|...+.+
T Consensus        71 ~~~~~~~----------~---~~~~~~~~~~~~~~l~~aa~~----~gvkr~I~~Ss~~~~~--~~~~~~~~~K~~~e~~  131 (317)
T CHL00194         71 ASTSRPS----------D---LYNAKQIDWDGKLALIEAAKA----AKIKRFIFFSILNAEQ--YPYIPLMKLKSDIEQK  131 (317)
T ss_pred             CCCCCCC----------C---ccchhhhhHHHHHHHHHHHHH----cCCCEEEEeccccccc--cCCChHHHHHHHHHHH
Confidence            8764211          1   122456778887777766643    4556899999864321  1235688889887766


Q ss_pred             HHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 021960          193 TKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSKDIAE  272 (305)
Q Consensus       193 ~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  272 (305)
                      .+       ..++....+.|+.+...+........         . ...+         .+... ......++..+|+|+
T Consensus       132 l~-------~~~l~~tilRp~~~~~~~~~~~~~~~---------~-~~~~---------~~~~~-~~~~~~~i~v~Dva~  184 (317)
T CHL00194        132 LK-------KSGIPYTIFRLAGFFQGLISQYAIPI---------L-EKQP---------IWITN-ESTPISYIDTQDAAK  184 (317)
T ss_pred             HH-------HcCCCeEEEeecHHhhhhhhhhhhhh---------c-cCCc---------eEecC-CCCccCccCHHHHHH
Confidence            53       24788889999865433211100000         0 0000         00000 011224567899999


Q ss_pred             HHHHhccCCCCceeccEEEecCCccc
Q 021960          273 AALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       273 ~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      ++..++....  ..|+++++-|+..+
T Consensus       185 ~~~~~l~~~~--~~~~~~ni~g~~~~  208 (317)
T CHL00194        185 FCLKSLSLPE--TKNKTFPLVGPKSW  208 (317)
T ss_pred             HHHHHhcCcc--ccCcEEEecCCCcc
Confidence            9998886543  25899999888654

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=99.58  E-value=3.5e-13  Score=126.59  Aligned_cols=218  Identities=16%  Similarity=0.106  Sum_probs=140.2

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcch-hhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTL-GSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLD  108 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~-~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id  108 (305)
                      ..++||||||+|.||+++++.|+++|++|++++|.... ...........++.++..|+.+..     +       ..+|
T Consensus       119 ~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~~~~~~~~~~~Di~~~~-----~-------~~~D  186 (436)
T PLN02166        119 KRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLFGNPRFELIRHDVVEPI-----L-------LEVD  186 (436)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhccCCceEEEECcccccc-----c-------cCCC
Confidence            46789999999999999999999999999999875322 111111112235778888886531     1       2589


Q ss_pred             EEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEeccccccc--------------
Q 021960          109 ILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVM--------------  174 (305)
Q Consensus       109 ~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~--------------  174 (305)
                      +|||+|+.....    .    ...+..+.+++|+.++.++++++..    .+ .++|++||.+.+-              
T Consensus       187 ~ViHlAa~~~~~----~----~~~~p~~~~~~Nv~gT~nLleaa~~----~g-~r~V~~SS~~VYg~~~~~p~~E~~~~~  253 (436)
T PLN02166        187 QIYHLACPASPV----H----YKYNPVKTIKTNVMGTLNMLGLAKR----VG-ARFLLTSTSEVYGDPLEHPQKETYWGN  253 (436)
T ss_pred             EEEECceeccch----h----hccCHHHHHHHHHHHHHHHHHHHHH----hC-CEEEEECcHHHhCCCCCCCCCcccccc
Confidence            999999864321    0    1123457789999999888877754    23 4899999875332              


Q ss_pred             --CCCCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHH
Q 021960          175 --GGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEE  252 (305)
Q Consensus       175 --~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (305)
                        +......|+.+|.+.+.+++.+++.   .++.+..+.|+.+..+....  ..   . .            -....+..
T Consensus       254 ~~p~~p~s~Yg~SK~~aE~~~~~y~~~---~~l~~~ilR~~~vYGp~~~~--~~---~-~------------~i~~~i~~  312 (436)
T PLN02166        254 VNPIGERSCYDEGKRTAETLAMDYHRG---AGVEVRIARIFNTYGPRMCL--DD---G-R------------VVSNFVAQ  312 (436)
T ss_pred             CCCCCCCCchHHHHHHHHHHHHHHHHH---hCCCeEEEEEccccCCCCCC--Cc---c-c------------hHHHHHHH
Confidence              1112356999999999999887665   47888889988777653110  00   0 0            00001111


Q ss_pred             HHhh-----c--CCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCcc
Q 021960          253 FVSG-----L--GNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT  297 (305)
Q Consensus       253 ~~~~-----~--~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~  297 (305)
                      ...+     +  +.....++..+|+++++..++...    .+.++++.+|..
T Consensus       313 ~l~~~~i~v~g~g~~~rdfi~V~Dva~ai~~~~~~~----~~giyNIgs~~~  360 (436)
T PLN02166        313 TIRKQPMTVYGDGKQTRSFQYVSDLVDGLVALMEGE----HVGPFNLGNPGE  360 (436)
T ss_pred             HhcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHHhcC----CCceEEeCCCCc
Confidence            1111     0  112345678999999998887643    234788876643

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=99.54  E-value=3.9e-13  Score=120.50  Aligned_cols=145  Identities=17%  Similarity=0.119  Sum_probs=105.4

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEEEE
Q 021960           33 VAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILYN  112 (305)
Q Consensus        33 ~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~li~  112 (305)
                      ++|||||+|.||+++++.|.++| .|+.++|...               .+..|++|.+++.++++..     ++|+|||
T Consensus         2 ~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~---------------~~~~Dl~d~~~~~~~~~~~-----~~D~Vih   60 (299)
T PRK09987          2 NILLFGKTGQVGWELQRALAPLG-NLIALDVHST---------------DYCGDFSNPEGVAETVRKI-----RPDVIVN   60 (299)
T ss_pred             eEEEECCCCHHHHHHHHHhhccC-CEEEeccccc---------------cccCCCCCHHHHHHHHHhc-----CCCEEEE
Confidence            69999999999999999999999 7888877521               1357999999998887743     5899999


Q ss_pred             cCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccC-----------CCCCcc
Q 021960          113 NAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMG-----------GLGPHA  181 (305)
Q Consensus       113 nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~-----------~~~~~~  181 (305)
                      +|+.....        ...++.+..+++|+.++.++++++..    .+ .++|++||..-+-+           ......
T Consensus        61 ~Aa~~~~~--------~~~~~~~~~~~~N~~~~~~l~~aa~~----~g-~~~v~~Ss~~Vy~~~~~~p~~E~~~~~P~~~  127 (299)
T PRK09987         61 AAAHTAVD--------KAESEPEFAQLLNATSVEAIAKAANE----VG-AWVVHYSTDYVFPGTGDIPWQETDATAPLNV  127 (299)
T ss_pred             CCccCCcc--------hhhcCHHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEccceEECCCCCCCcCCCCCCCCCCH
Confidence            99975321        12223456678999999888887754    33 47999998653321           113357


Q ss_pred             chhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccc
Q 021960          182 YTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATS  218 (305)
Q Consensus       182 Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~  218 (305)
                      |+.+|.+.+.+++....       ....+.|+++..+
T Consensus       128 Yg~sK~~~E~~~~~~~~-------~~~ilR~~~vyGp  157 (299)
T PRK09987        128 YGETKLAGEKALQEHCA-------KHLIFRTSWVYAG  157 (299)
T ss_pred             HHHHHHHHHHHHHHhCC-------CEEEEecceecCC
Confidence            99999999999876432       2366777776654

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=99.51  E-value=3.2e-13  Score=117.81  Aligned_cols=154  Identities=21%  Similarity=0.214  Sum_probs=117.3

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcch----hhhHhhhc-CCCCeEEEEecCCCHHHHHHHHHHHHHhcC
Q 021960           31 GKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTL----GSVLASTL-APAPVTFVHCDVSLEEDIENLINSTVSRYG  105 (305)
Q Consensus        31 ~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~----~~~~~~~~-~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g  105 (305)
                      +++||||||.|.||.+.+.+|.++|+.|++++.-...    ........ .+..+.++..|++|.+.+++++++.     
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~-----   76 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEV-----   76 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhc-----
Confidence            5789999999999999999999999999998753222    22222222 2467999999999999999998876     


Q ss_pred             CccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEeccccccc-----C-----
Q 021960          106 RLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVM-----G-----  175 (305)
Q Consensus       106 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~-----~-----  175 (305)
                      ++|.|+|-|+.-..+        .+.++....++.|+.+++++++....    .+...+|+.||..-+-     |     
T Consensus        77 ~fd~V~Hfa~~~~vg--------eS~~~p~~Y~~nNi~gtlnlLe~~~~----~~~~~~V~sssatvYG~p~~ip~te~~  144 (343)
T KOG1371|consen   77 KFDAVMHFAALAAVG--------ESMENPLSYYHNNIAGTLNLLEVMKA----HNVKALVFSSSATVYGLPTKVPITEED  144 (343)
T ss_pred             CCceEEeehhhhccc--------hhhhCchhheehhhhhHHHHHHHHHH----cCCceEEEecceeeecCcceeeccCcC
Confidence            699999999865432        24455578899999999887766544    5566788877755431     1     


Q ss_pred             -CC-CCccchhhHHHHHHHHHHHHHHHC
Q 021960          176 -GL-GPHAYTASKHAIVGLTKNAACELG  201 (305)
Q Consensus       176 -~~-~~~~Y~~sKaa~~~~~~~la~e~~  201 (305)
                       .- ....||.+|.+++.+.+.+...+.
T Consensus       145 ~t~~p~~pyg~tK~~iE~i~~d~~~~~~  172 (343)
T KOG1371|consen  145 PTDQPTNPYGKTKKAIEEIIHDYNKAYG  172 (343)
T ss_pred             CCCCCCCcchhhhHHHHHHHHhhhcccc
Confidence             11 456899999999999999888764

>PLN02996 fatty acyl-CoA reductase

Probab=99.51  E-value=5.4e-13  Score=127.19  Aligned_cols=233  Identities=15%  Similarity=0.074  Sum_probs=144.0

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCC---eEEEEecCcchhh---hHh-hh------------c-------CCCCe
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGA---KVVIADVEDTLGS---VLA-ST------------L-------APAPV   80 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~---~vv~~~r~~~~~~---~~~-~~------------~-------~~~~v   80 (305)
                      ..++||+|+||||||.||+.+++.|++.+-   +|+++.|......   .+. +.            .       ...++
T Consensus         7 ~~~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv   86 (491)
T PLN02996          7 QFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKV   86 (491)
T ss_pred             HHhCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCE
Confidence            356899999999999999999999987643   4677666543211   111 00            0       01468


Q ss_pred             EEEEecCC-------CHHHHHHHHHHHHHhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHH
Q 021960           81 TFVHCDVS-------LEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAA  153 (305)
Q Consensus        81 ~~~~~D~~-------d~~~i~~~~~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~  153 (305)
                      .++..|++       +.+.++.+++       .+|+|||+|+....       .    +..+..+.+|+.++.++++.+.
T Consensus        87 ~~i~GDl~~~~LGLs~~~~~~~l~~-------~vD~ViH~AA~v~~-------~----~~~~~~~~~Nv~gt~~ll~~a~  148 (491)
T PLN02996         87 TPVPGDISYDDLGVKDSNLREEMWK-------EIDIVVNLAATTNF-------D----ERYDVALGINTLGALNVLNFAK  148 (491)
T ss_pred             EEEecccCCcCCCCChHHHHHHHHh-------CCCEEEECccccCC-------c----CCHHHHHHHHHHHHHHHHHHHH
Confidence            99999998       4444444443       58999999997521       1    2456788999999988887764


Q ss_pred             HHHHcCCCCEEEEecccccccCCC--------------------------------------------------------
Q 021960          154 RVMINRGGGCIISTASVAGVMGGL--------------------------------------------------------  177 (305)
Q Consensus       154 ~~~~~~~~~~iv~isS~~~~~~~~--------------------------------------------------------  177 (305)
                      ..   .+..++|++||.+.+-...                                                        
T Consensus       149 ~~---~~~k~~V~vST~~vyG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (491)
T PLN02996        149 KC---VKVKMLLHVSTAYVCGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGME  225 (491)
T ss_pred             hc---CCCCeEEEEeeeEEecCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchh
Confidence            42   2335899999876431100                                                        


Q ss_pred             ------CCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHH
Q 021960          178 ------GPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKME  251 (305)
Q Consensus       178 ------~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (305)
                            ....|+.||++.+.+++..+     .++.+..+.|+.|..+.... .+.        .......+ ...+..+.
T Consensus       226 ~~~~~~~pn~Y~~TK~~aE~lv~~~~-----~~lpv~i~RP~~V~G~~~~p-~~g--------wi~~~~~~-~~i~~~~~  290 (491)
T PLN02996        226 RAKLHGWPNTYVFTKAMGEMLLGNFK-----ENLPLVIIRPTMITSTYKEP-FPG--------WIEGLRTI-DSVIVGYG  290 (491)
T ss_pred             HHHhCCCCCchHhhHHHHHHHHHHhc-----CCCCEEEECCCEeccCCcCC-CCC--------cccchhhH-HHHHHHhc
Confidence                  12359999999999996542     37999999999998875211 111        00000000 00000000


Q ss_pred             H-HH---hhcCCCCCCCCCHHHHHHHHHHhccCCC-CceeccEEEecCC
Q 021960          252 E-FV---SGLGNLKGTTLRSKDIAEAALYLASDES-RYVSGHNLVVDGG  295 (305)
Q Consensus       252 ~-~~---~~~~~~~~~~~~~~dva~~v~~l~s~~~-~~~tG~~i~idgG  295 (305)
                      . ..   -.-+.....++.+++++++++.++.... ..-.+.++++.+|
T Consensus       291 ~g~~~~~~gdg~~~~D~v~Vddvv~a~l~a~~~~~~~~~~~~vYNi~s~  339 (491)
T PLN02996        291 KGKLTCFLADPNSVLDVIPADMVVNAMIVAMAAHAGGQGSEIIYHVGSS  339 (491)
T ss_pred             cceEeEEecCCCeecceecccHHHHHHHHHHHHhhccCCCCcEEEecCC
Confidence            0 00   0001234567889999999888776421 1124678999877

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.51  E-value=3.5e-12  Score=126.33  Aligned_cols=224  Identities=17%  Similarity=0.134  Sum_probs=139.4

Q ss_pred             EEEEecCCCchHHHHHHHHH--HcCCeEEEEecCcchhhh--HhhhcCCCCeEEEEecCCCHHHH--HHHHHHHHHhcCC
Q 021960           33 VAIITGGARGIGEAAVRLFA--RHGAKVVIADVEDTLGSV--LASTLAPAPVTFVHCDVSLEEDI--ENLINSTVSRYGR  106 (305)
Q Consensus        33 ~vlVtGas~giG~~ia~~l~--~~g~~vv~~~r~~~~~~~--~~~~~~~~~v~~~~~D~~d~~~i--~~~~~~~~~~~g~  106 (305)
                      ++|||||||.||+++++.|+  +.|++|++++|+......  +.......++.++.+|++|.+..  ...++.+    ..
T Consensus         2 ~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l----~~   77 (657)
T PRK07201          2 RYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL----GD   77 (657)
T ss_pred             eEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchHHHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh----cC
Confidence            69999999999999999999  589999999986433211  11111224688999999984310  1111222    36


Q ss_pred             ccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccC-----------
Q 021960          107 LDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMG-----------  175 (305)
Q Consensus       107 id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~-----------  175 (305)
                      +|+|||+||.....        .+   .....++|+.++.++++.+..    .+..++|++||...+-.           
T Consensus        78 ~D~Vih~Aa~~~~~--------~~---~~~~~~~nv~gt~~ll~~a~~----~~~~~~v~~SS~~v~g~~~~~~~e~~~~  142 (657)
T PRK07201         78 IDHVVHLAAIYDLT--------AD---EEAQRAANVDGTRNVVELAER----LQAATFHHVSSIAVAGDYEGVFREDDFD  142 (657)
T ss_pred             CCEEEECceeecCC--------CC---HHHHHHHHhHHHHHHHHHHHh----cCCCeEEEEeccccccCccCccccccch
Confidence            99999999964221        12   245668899998777766543    44568999998765321           


Q ss_pred             --CCCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHH-HHHHHHH
Q 021960          176 --GLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQK-EVRKMEE  252 (305)
Q Consensus       176 --~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  252 (305)
                        ......|+.+|...+.+++.      ..++.+..+.|+.+..+-.......              .+... ....+..
T Consensus       143 ~~~~~~~~Y~~sK~~~E~~~~~------~~g~~~~ilRp~~v~G~~~~g~~~~--------------~~~~~~~~~~~~~  202 (657)
T PRK07201        143 EGQGLPTPYHRTKFEAEKLVRE------ECGLPWRVYRPAVVVGDSRTGEMDK--------------IDGPYYFFKVLAK  202 (657)
T ss_pred             hhcCCCCchHHHHHHHHHHHHH------cCCCcEEEEcCCeeeecCCCCcccc--------------CCcHHHHHHHHHH
Confidence              11235799999999988753      2479999999999977531100000              00000 0001111


Q ss_pred             HHh------hc--CCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCcc
Q 021960          253 FVS------GL--GNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT  297 (305)
Q Consensus       253 ~~~------~~--~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~  297 (305)
                      ...      ..  ......+...+|+++++..++..+  ...|+++++-++..
T Consensus       203 ~~~~~~~~~~~~~~~~~~~~v~vddva~ai~~~~~~~--~~~g~~~ni~~~~~  253 (657)
T PRK07201        203 LAKLPSWLPMVGPDGGRTNIVPVDYVADALDHLMHKD--GRDGQTFHLTDPKP  253 (657)
T ss_pred             hccCCcccccccCCCCeeeeeeHHHHHHHHHHHhcCc--CCCCCEEEeCCCCC
Confidence            000      00  001123567899999999988643  24689999877643

>PRK05865 hypothetical protein; Provisional

Probab=99.47  E-value=2.5e-12  Score=128.06  Aligned_cols=184  Identities=17%  Similarity=0.174  Sum_probs=126.9

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEEEE
Q 021960           33 VAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILYN  112 (305)
Q Consensus        33 ~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~li~  112 (305)
                      +++||||+|+||+++++.|+++|++|++++|+....      . ...+.++.+|++|.+++.++++       .+|+|||
T Consensus         2 kILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~------~-~~~v~~v~gDL~D~~~l~~al~-------~vD~VVH   67 (854)
T PRK05865          2 RIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS------W-PSSADFIAADIRDATAVESAMT-------GADVVAH   67 (854)
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh------c-ccCceEEEeeCCCHHHHHHHHh-------CCCEEEE
Confidence            689999999999999999999999999998874321      1 1247789999999999887775       5899999


Q ss_pred             cCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhHHHHHHH
Q 021960          113 NAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGL  192 (305)
Q Consensus       113 nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~  192 (305)
                      +|+...      .           .+++|+.++.++++++    .+.+.++||++||..              |.+.+.+
T Consensus        68 lAa~~~------~-----------~~~vNv~GT~nLLeAa----~~~gvkr~V~iSS~~--------------K~aaE~l  112 (854)
T PRK05865         68 CAWVRG------R-----------NDHINIDGTANVLKAM----AETGTGRIVFTSSGH--------------QPRVEQM  112 (854)
T ss_pred             CCCccc------c-----------hHHHHHHHHHHHHHHH----HHcCCCeEEEECCcH--------------HHHHHHH
Confidence            997531      1           3578898887766554    345567999999863              7777766


Q ss_pred             HHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHH-HhhcCCC--CCCCCCHHH
Q 021960          193 TKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEF-VSGLGNL--KGTTLRSKD  269 (305)
Q Consensus       193 ~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~d  269 (305)
                      ++    +   .++.+..+.|+.+..+.....                       +..+... ....+..  ...++..+|
T Consensus       113 l~----~---~gl~~vILRp~~VYGP~~~~~-----------------------i~~ll~~~v~~~G~~~~~~dfIhVdD  162 (854)
T PRK05865        113 LA----D---CGLEWVAVRCALIFGRNVDNW-----------------------VQRLFALPVLPAGYADRVVQVVHSDD  162 (854)
T ss_pred             HH----H---cCCCEEEEEeceEeCCChHHH-----------------------HHHHhcCceeccCCCCceEeeeeHHH
Confidence            53    2   479999999998876531110                       0000000 0000111  124678999


Q ss_pred             HHHHHHHhccCCCCceeccEEEecCCcc
Q 021960          270 IAEAALYLASDESRYVSGHNLVVDGGVT  297 (305)
Q Consensus       270 va~~v~~l~s~~~~~~tG~~i~idgG~~  297 (305)
                      +++++..++....  ..|.++++-+|..
T Consensus       163 VA~Ai~~aL~~~~--~~ggvyNIgsg~~  188 (854)
T PRK05865        163 AQRLLVRALLDTV--IDSGPVNLAAPGE  188 (854)
T ss_pred             HHHHHHHHHhCCC--cCCCeEEEECCCc
Confidence            9999988875321  2356788877654

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.47  E-value=2.6e-12  Score=106.58  Aligned_cols=173  Identities=14%  Similarity=0.101  Sum_probs=122.5

Q ss_pred             EEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEEEEc
Q 021960           34 AIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILYNN  113 (305)
Q Consensus        34 vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~li~n  113 (305)
                      |+|+||||.+|+.++++|+++|++|+++.|+..+.+.      ..+++++.+|+.|.+++.+.++       ..|++|++
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~------~~~~~~~~~d~~d~~~~~~al~-------~~d~vi~~   67 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED------SPGVEIIQGDLFDPDSVKAALK-------GADAVIHA   67 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH------CTTEEEEESCTTCHHHHHHHHT-------TSSEEEEC
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc------ccccccceeeehhhhhhhhhhh-------hcchhhhh
Confidence            6899999999999999999999999999999775544      4569999999999988887775       68999999


Q ss_pred             CCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCC---------ccchh
Q 021960          114 AGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGP---------HAYTA  184 (305)
Q Consensus       114 ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~---------~~Y~~  184 (305)
                      +|...     .       +             ...++.+...+++.+..++|++||.......+..         ..|..
T Consensus        68 ~~~~~-----~-------~-------------~~~~~~~~~a~~~~~~~~~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~  122 (183)
T PF13460_consen   68 AGPPP-----K-------D-------------VDAAKNIIEAAKKAGVKRVVYLSSAGVYRDPPGLFSDEDKPIFPEYAR  122 (183)
T ss_dssp             CHSTT-----T-------H-------------HHHHHHHHHHHHHTTSSEEEEEEETTGTTTCTSEEEGGTCGGGHHHHH
T ss_pred             hhhhc-----c-------c-------------ccccccccccccccccccceeeeccccCCCCCcccccccccchhhhHH
Confidence            97531     1       1             2334555565666777899999998866543332         24566


Q ss_pred             hHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCC
Q 021960          185 SKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT  264 (305)
Q Consensus       185 sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (305)
                      .|...+.+.       .+.++....++|+.+..+.....-..              .+              ........
T Consensus       123 ~~~~~e~~~-------~~~~~~~~ivrp~~~~~~~~~~~~~~--------------~~--------------~~~~~~~~  167 (183)
T PF13460_consen  123 DKREAEEAL-------RESGLNWTIVRPGWIYGNPSRSYRLI--------------KE--------------GGPQGVNF  167 (183)
T ss_dssp             HHHHHHHHH-------HHSTSEEEEEEESEEEBTTSSSEEEE--------------SS--------------TSTTSHCE
T ss_pred             HHHHHHHHH-------HhcCCCEEEEECcEeEeCCCcceeEE--------------ec--------------cCCCCcCc
Confidence            665554443       23489999999999877642210000              00              01122356


Q ss_pred             CCHHHHHHHHHHhcc
Q 021960          265 LRSKDIAEAALYLAS  279 (305)
Q Consensus       265 ~~~~dva~~v~~l~s  279 (305)
                      ++.+|+|++++.++.
T Consensus       168 i~~~DvA~~~~~~l~  182 (183)
T PF13460_consen  168 ISREDVAKAIVEALE  182 (183)
T ss_dssp             EEHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHhC
Confidence            788999999998764

...

>PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function

Probab=99.40  E-value=2.4e-11  Score=106.85  Aligned_cols=183  Identities=14%  Similarity=0.072  Sum_probs=148.8

Q ss_pred             CEEEEecC-CCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcC-----
Q 021960           32 KVAIITGG-ARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYG-----  105 (305)
Q Consensus        32 k~vlVtGa-s~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g-----  105 (305)
                      ++|||.|. +.-|++.+|.-|-++|+-|+++..+.+.....+.+. ...+.....|..+..++...+.++.+...     
T Consensus         4 evVvI~Gs~~~PltR~la~DLeRRGFIV~v~~~~~ed~~~ve~e~-~~dI~~L~ld~~~~~~~~~~l~~f~~~L~~p~~p   82 (299)
T PF08643_consen    4 EVVVIAGSPHDPLTRSLALDLERRGFIVYVTVSSAEDEKYVESED-RPDIRPLWLDDSDPSSIHASLSRFASLLSRPHVP   82 (299)
T ss_pred             eEEEEECCCCCccHHHHHHHHhhCCeEEEEEeCCHHHHHHHHhcc-CCCCCCcccCCCCCcchHHHHHHHHHHhcCCCCC
Confidence            57899985 799999999999999999999988776655555444 44588888888887777777776665433     


Q ss_pred             ---------CccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC--CCCEEEE-ecccccc
Q 021960          106 ---------RLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINR--GGGCIIS-TASVAGV  173 (305)
Q Consensus       106 ---------~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~~~iv~-isS~~~~  173 (305)
                               .+..||.......   ..+++++++.+.|.+.++.|+..++.+++.++|++..+  .+.+||+ .-|+.+.
T Consensus        83 ~~~~~~h~l~L~svi~~Psl~y---p~gPie~i~~s~~~~~ln~~ll~~~~~~q~lLPlL~~~~~~~~~iil~~Psi~ss  159 (299)
T PF08643_consen   83 FPGAPPHHLQLKSVIFIPSLSY---PTGPIETISPSSWADELNTRLLTPILTIQGLLPLLRSRSNQKSKIILFNPSISSS  159 (299)
T ss_pred             CCCCCCceeEEEEEEEecCCCC---CCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEeCchhhc
Confidence                     2455666655443   23788899999999999999999999999999999872  3455554 5588888


Q ss_pred             cCCCCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccc
Q 021960          174 MGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATS  218 (305)
Q Consensus       174 ~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~  218 (305)
                      ...|+.+.-....+++..|..+|++|+.+.+|.|..+..|.++-.
T Consensus       160 l~~PfhspE~~~~~al~~~~~~LrrEl~~~~I~V~~i~LG~l~i~  204 (299)
T PF08643_consen  160 LNPPFHSPESIVSSALSSFFTSLRRELRPHNIDVTQIKLGNLDIG  204 (299)
T ss_pred             cCCCccCHHHHHHHHHHHHHHHHHHHhhhcCCceEEEEeeeeccc
Confidence            889999999999999999999999999999999999999998766

One of the proteins P32792 from SWISSPROT has been localised to the mitochondria [].

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=99.39  E-value=1.4e-11  Score=111.09  Aligned_cols=168  Identities=22%  Similarity=0.195  Sum_probs=124.4

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcC--CeEEEEecCcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhcC
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHG--AKVVIADVEDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRYG  105 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g--~~vv~~~r~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g  105 (305)
                      ++.++|||||+|.+|++++.+|.+++  ..+.+++..........+..  ...++.++.+|+.|..++.+.++       
T Consensus         3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~-------   75 (361)
T KOG1430|consen    3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAFQ-------   75 (361)
T ss_pred             cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhcc-------
Confidence            56799999999999999999999998  67888887765322222222  25679999999999988888775       


Q ss_pred             CccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccC----------
Q 021960          106 RLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMG----------  175 (305)
Q Consensus       106 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~----------  175 (305)
                      .. .+||+|+....        ..-..+.+..+++|+.++.++...+..    .+..++|++||..-..+          
T Consensus        76 ~~-~Vvh~aa~~~~--------~~~~~~~~~~~~vNV~gT~nvi~~c~~----~~v~~lIYtSs~~Vvf~g~~~~n~~E~  142 (361)
T KOG1430|consen   76 GA-VVVHCAASPVP--------DFVENDRDLAMRVNVNGTLNVIEACKE----LGVKRLIYTSSAYVVFGGEPIINGDES  142 (361)
T ss_pred             Cc-eEEEeccccCc--------cccccchhhheeecchhHHHHHHHHHH----hCCCEEEEecCceEEeCCeecccCCCC
Confidence            45 67777764322        122235677889999998776666654    56678999999775432          


Q ss_pred             --CCC--CccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccc
Q 021960          176 --GLG--PHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSML  220 (305)
Q Consensus       176 --~~~--~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~  220 (305)
                        .|.  ...|+.||+-.|.+++..+.   .......++.|-.|..|..
T Consensus       143 ~p~p~~~~d~Y~~sKa~aE~~Vl~an~---~~~l~T~aLR~~~IYGpgd  188 (361)
T KOG1430|consen  143 LPYPLKHIDPYGESKALAEKLVLEANG---SDDLYTCALRPPGIYGPGD  188 (361)
T ss_pred             CCCccccccccchHHHHHHHHHHHhcC---CCCeeEEEEccccccCCCC
Confidence              222  24899999999999987765   3467888999988887753

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.37  E-value=5.6e-12  Score=110.07  Aligned_cols=158  Identities=20%  Similarity=0.191  Sum_probs=96.1

Q ss_pred             EecCCCchHHHHHHHHHHcCC--eEEEEecCcch---hhhHhhhc------------CCCCeEEEEecCCCH------HH
Q 021960           36 ITGGARGIGEAAVRLFARHGA--KVVIADVEDTL---GSVLASTL------------APAPVTFVHCDVSLE------ED   92 (305)
Q Consensus        36 VtGas~giG~~ia~~l~~~g~--~vv~~~r~~~~---~~~~~~~~------------~~~~v~~~~~D~~d~------~~   92 (305)
                      ||||||.||.++.++|++++.  +|+.+.|....   .+.+.+.+            ...++.++..|++++      +.
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~   80 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED   80 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence            799999999999999999876  88888886533   22221111            156899999999974      33


Q ss_pred             HHHHHHHHHHhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEeccccc
Q 021960           93 IENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAG  172 (305)
Q Consensus        93 i~~~~~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~  172 (305)
                      .+.+.+       .+|+|||||+.....           ..+.+..++|+.|+..+++.+.    +.+..+++++||...
T Consensus        81 ~~~L~~-------~v~~IiH~Aa~v~~~-----------~~~~~~~~~NV~gt~~ll~la~----~~~~~~~~~iSTa~v  138 (249)
T PF07993_consen   81 YQELAE-------EVDVIIHCAASVNFN-----------APYSELRAVNVDGTRNLLRLAA----QGKRKRFHYISTAYV  138 (249)
T ss_dssp             HHHHHH-------H--EEEE--SS-SBS------------S--EEHHHHHHHHHHHHHHHT----SSS---EEEEEEGGG
T ss_pred             hhcccc-------ccceeeecchhhhhc-----------ccchhhhhhHHHHHHHHHHHHH----hccCcceEEeccccc
Confidence            444333       589999999975321           1344567899999877766654    233348999999321


Q ss_pred             cc--C------------------CCCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccc
Q 021960          173 VM--G------------------GLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATS  218 (305)
Q Consensus       173 ~~--~------------------~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~  218 (305)
                      ..  .                  ......|..||..-|.+++..+.+   .|+.+..+.||.|...
T Consensus       139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~---~g~p~~I~Rp~~i~g~  201 (249)
T PF07993_consen  139 AGSRPGTIEEKVYPEEEDDLDPPQGFPNGYEQSKWVAERLLREAAQR---HGLPVTIYRPGIIVGD  201 (249)
T ss_dssp             TTS-TTT--SSS-HHH--EEE--TTSEE-HHHHHHHHHHHHHHHHHH---H---EEEEEE-EEE-S
T ss_pred             cCCCCCcccccccccccccchhhccCCccHHHHHHHHHHHHHHHHhc---CCceEEEEecCccccc
Confidence            10  0                  112358999999999999988876   4789999999999774

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PLN02778 3,5-epimerase/4-reductase

Probab=99.37  E-value=4.4e-11  Score=107.18  Aligned_cols=131  Identities=19%  Similarity=0.178  Sum_probs=89.7

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEE
Q 021960           31 GKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDIL  110 (305)
Q Consensus        31 ~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~l  110 (305)
                      .+++|||||+|.||+++++.|+++|++|+...                      .|+.|.+.+...++..     ++|+|
T Consensus         9 ~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~----------------------~~~~~~~~v~~~l~~~-----~~D~V   61 (298)
T PLN02778          9 TLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGS----------------------GRLENRASLEADIDAV-----KPTHV   61 (298)
T ss_pred             CCeEEEECCCCHHHHHHHHHHHhCCCEEEEec----------------------CccCCHHHHHHHHHhc-----CCCEE
Confidence            36899999999999999999999999886421                      2455666665555432     68999


Q ss_pred             EEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEeccccccc----------------
Q 021960          111 YNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVM----------------  174 (305)
Q Consensus       111 i~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~----------------  174 (305)
                      ||+||.....     ..+...++..+.+++|+.++.++++.+...    +. +++++||.+.+.                
T Consensus        62 iH~Aa~~~~~-----~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~----gv-~~v~~sS~~vy~~~~~~p~~~~~~~~Ee  131 (298)
T PLN02778         62 FNAAGVTGRP-----NVDWCESHKVETIRANVVGTLTLADVCRER----GL-VLTNYATGCIFEYDDAHPLGSGIGFKEE  131 (298)
T ss_pred             EECCcccCCC-----CchhhhhCHHHHHHHHHHHHHHHHHHHHHh----CC-CEEEEecceEeCCCCCCCcccCCCCCcC
Confidence            9999975321     011122455778999999999888887542    22 345555433210                


Q ss_pred             --CCCCCccchhhHHHHHHHHHHHHH
Q 021960          175 --GGLGPHAYTASKHAIVGLTKNAAC  198 (305)
Q Consensus       175 --~~~~~~~Y~~sKaa~~~~~~~la~  198 (305)
                        +.+....|+.+|.+.+.+++.++.
T Consensus       132 ~~p~~~~s~Yg~sK~~~E~~~~~y~~  157 (298)
T PLN02778        132 DTPNFTGSFYSKTKAMVEELLKNYEN  157 (298)
T ss_pred             CCCCCCCCchHHHHHHHHHHHHHhhc
Confidence              011235799999999999987653

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=99.37  E-value=2.3e-11  Score=106.02  Aligned_cols=185  Identities=20%  Similarity=0.167  Sum_probs=130.0

Q ss_pred             EEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEEEEc
Q 021960           34 AIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILYNN  113 (305)
Q Consensus        34 vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~li~n  113 (305)
                      +||||++|-+|.++++.|. .++.|+.+++.+                   +|++|.+++.+++++.     ++|+|||+
T Consensus         3 iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~-------------------~Ditd~~~v~~~i~~~-----~PDvVIn~   57 (281)
T COG1091           3 ILITGANGQLGTELRRALP-GEFEVIATDRAE-------------------LDITDPDAVLEVIRET-----RPDVVINA   57 (281)
T ss_pred             EEEEcCCChHHHHHHHHhC-CCceEEeccCcc-------------------ccccChHHHHHHHHhh-----CCCEEEEC
Confidence            8999999999999999999 668898887764                   6999999999999887     79999999


Q ss_pred             CCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCC-----------CCccc
Q 021960          114 AGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGL-----------GPHAY  182 (305)
Q Consensus       114 ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~-----------~~~~Y  182 (305)
                      |++....        --+.+.+..+.+|..++.++.+++..     -+..+|++|+..-+.|..           ....|
T Consensus        58 AAyt~vD--------~aE~~~e~A~~vNa~~~~~lA~aa~~-----~ga~lVhiSTDyVFDG~~~~~Y~E~D~~~P~nvY  124 (281)
T COG1091          58 AAYTAVD--------KAESEPELAFAVNATGAENLARAAAE-----VGARLVHISTDYVFDGEKGGPYKETDTPNPLNVY  124 (281)
T ss_pred             ccccccc--------cccCCHHHHHHhHHHHHHHHHHHHHH-----hCCeEEEeecceEecCCCCCCCCCCCCCCChhhh
Confidence            9986432        23344688899999999999888754     346899999987665543           34689


Q ss_pred             hhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHH--HHHHhhcCCC
Q 021960          183 TASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKM--EEFVSGLGNL  260 (305)
Q Consensus       183 ~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~  260 (305)
                      |.||.+-|..++.....       ...+...++......++..                   ..++..  .+.+..+...
T Consensus       125 G~sKl~GE~~v~~~~~~-------~~I~Rtswv~g~~g~nFv~-------------------tml~la~~~~~l~vv~Dq  178 (281)
T COG1091         125 GRSKLAGEEAVRAAGPR-------HLILRTSWVYGEYGNNFVK-------------------TMLRLAKEGKELKVVDDQ  178 (281)
T ss_pred             hHHHHHHHHHHHHhCCC-------EEEEEeeeeecCCCCCHHH-------------------HHHHHhhcCCceEEECCe
Confidence            99999999998765422       2333334443332111100                   001111  0112222344


Q ss_pred             CCCCCCHHHHHHHHHHhccCCC
Q 021960          261 KGTTLRSKDIAEAALYLASDES  282 (305)
Q Consensus       261 ~~~~~~~~dva~~v~~l~s~~~  282 (305)
                      .+.....+|+|+.+..|+....
T Consensus       179 ~gsPt~~~dlA~~i~~ll~~~~  200 (281)
T COG1091         179 YGSPTYTEDLADAILELLEKEK  200 (281)
T ss_pred             eeCCccHHHHHHHHHHHHhccc
Confidence            5566688999999999887663

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=99.34  E-value=5.4e-12  Score=112.37  Aligned_cols=201  Identities=16%  Similarity=0.108  Sum_probs=124.1

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEEEE
Q 021960           33 VAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILYN  112 (305)
Q Consensus        33 ~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~li~  112 (305)
                      ++||||++|-||.++.+.|.++|+.|+.++|.                   .+|++|.+++.+++++.     ++|+|||
T Consensus         2 riLI~GasG~lG~~l~~~l~~~~~~v~~~~r~-------------------~~dl~d~~~~~~~~~~~-----~pd~Vin   57 (286)
T PF04321_consen    2 RILITGASGFLGSALARALKERGYEVIATSRS-------------------DLDLTDPEAVAKLLEAF-----KPDVVIN   57 (286)
T ss_dssp             EEEEETTTSHHHHHHHHHHTTTSEEEEEESTT-------------------CS-TTSHHHHHHHHHHH-------SEEEE
T ss_pred             EEEEECCCCHHHHHHHHHHhhCCCEEEEeCch-------------------hcCCCCHHHHHHHHHHh-----CCCeEec
Confidence            68999999999999999999999999988766                   46999999999998876     6999999


Q ss_pred             cCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCC-----------CCCcc
Q 021960          113 NAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGG-----------LGPHA  181 (305)
Q Consensus       113 nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~-----------~~~~~  181 (305)
                      +||....        +.-+++.+..+.+|+.++.++.+.+..     .+.++|++||..-+.+.           .....
T Consensus        58 ~aa~~~~--------~~ce~~p~~a~~iN~~~~~~la~~~~~-----~~~~li~~STd~VFdG~~~~~y~E~d~~~P~~~  124 (286)
T PF04321_consen   58 CAAYTNV--------DACEKNPEEAYAINVDATKNLAEACKE-----RGARLIHISTDYVFDGDKGGPYTEDDPPNPLNV  124 (286)
T ss_dssp             ------H--------HHHHHSHHHHHHHHTHHHHHHHHHHHH-----CT-EEEEEEEGGGS-SSTSSSB-TTS----SSH
T ss_pred             cceeecH--------HhhhhChhhhHHHhhHHHHHHHHHHHH-----cCCcEEEeeccEEEcCCcccccccCCCCCCCCH
Confidence            9987421        112345677899999999888887753     34689999998655442           12468


Q ss_pred             chhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHH--HHhhcCC
Q 021960          182 YTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEE--FVSGLGN  259 (305)
Q Consensus       182 Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~  259 (305)
                      ||.+|...|..++....       ....+.++++..+-..+..                   ....+.+.+  .+.....
T Consensus       125 YG~~K~~~E~~v~~~~~-------~~~IlR~~~~~g~~~~~~~-------------------~~~~~~~~~~~~i~~~~d  178 (286)
T PF04321_consen  125 YGRSKLEGEQAVRAACP-------NALILRTSWVYGPSGRNFL-------------------RWLLRRLRQGEPIKLFDD  178 (286)
T ss_dssp             HHHHHHHHHHHHHHH-S-------SEEEEEE-SEESSSSSSHH-------------------HHHHHHHHCTSEEEEESS
T ss_pred             HHHHHHHHHHHHHHhcC-------CEEEEecceecccCCCchh-------------------hhHHHHHhcCCeeEeeCC
Confidence            99999999998876221       4566777777655111000                   011111110  0111122


Q ss_pred             CCCCCCCHHHHHHHHHHhccCCCC-ceeccEEEecCCc
Q 021960          260 LKGTTLRSKDIAEAALYLASDESR-YVSGHNLVVDGGV  296 (305)
Q Consensus       260 ~~~~~~~~~dva~~v~~l~s~~~~-~~tG~~i~idgG~  296 (305)
                      ..+.....+|+|+.+..++..... .-..-++.+.|.-
T Consensus       179 ~~~~p~~~~dlA~~i~~l~~~~~~~~~~~Giyh~~~~~  216 (286)
T PF04321_consen  179 QYRSPTYVDDLARVILELIEKNLSGASPWGIYHLSGPE  216 (286)
T ss_dssp             CEE--EEHHHHHHHHHHHHHHHHH-GGG-EEEE---BS
T ss_pred             ceeCCEEHHHHHHHHHHHHHhcccccccceeEEEecCc
Confidence            333456789999999999876421 1123466665553

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.31  E-value=5.1e-11  Score=105.94  Aligned_cols=198  Identities=16%  Similarity=0.138  Sum_probs=119.3

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCC-ccEEE
Q 021960           33 VAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGR-LDILY  111 (305)
Q Consensus        33 ~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~-id~li  111 (305)
                      ++|||||||.||++++++|+++|++|.++.|+.....       ...+..+.+|+.|.+++...++.. +.... +|.++
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~-------~~~~~~~~~d~~d~~~l~~a~~~~-~~~~g~~d~v~   72 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA-------GPNEKHVKFDWLDEDTWDNPFSSD-DGMEPEISAVY   72 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc-------CCCCccccccCCCHHHHHHHHhcc-cCcCCceeEEE
Confidence            3799999999999999999999999999999865432       123566789999999999888543 22234 89999


Q ss_pred             EcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhHHHHHH
Q 021960          112 NNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVG  191 (305)
Q Consensus       112 ~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKaa~~~  191 (305)
                      ++++...           +.  .+            ..+.++..+++.+-.+||++||.....+.       ..+...+.
T Consensus        73 ~~~~~~~-----------~~--~~------------~~~~~i~aa~~~gv~~~V~~Ss~~~~~~~-------~~~~~~~~  120 (285)
T TIGR03649        73 LVAPPIP-----------DL--AP------------PMIKFIDFARSKGVRRFVLLSASIIEKGG-------PAMGQVHA  120 (285)
T ss_pred             EeCCCCC-----------Ch--hH------------HHHHHHHHHHHcCCCEEEEeeccccCCCC-------chHHHHHH
Confidence            9876421           00  00            01223334445666799999986543321       12322222


Q ss_pred             HHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCCHHHHH
Q 021960          192 LTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSKDIA  271 (305)
Q Consensus       192 ~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva  271 (305)
                      +.+    +  ..++....+.|+++..++....+.....  ..      +           .+....+...-.++.++|+|
T Consensus       121 ~l~----~--~~gi~~tilRp~~f~~~~~~~~~~~~~~--~~------~-----------~~~~~~g~~~~~~v~~~Dva  175 (285)
T TIGR03649       121 HLD----S--LGGVEYTVLRPTWFMENFSEEFHVEAIR--KE------N-----------KIYSATGDGKIPFVSADDIA  175 (285)
T ss_pred             HHH----h--ccCCCEEEEeccHHhhhhcccccccccc--cC------C-----------eEEecCCCCccCcccHHHHH
Confidence            221    1  1389999999998876542111100000  00      0           00000012223467899999


Q ss_pred             HHHHHhccCCCCceeccEEEecCCcc
Q 021960          272 EAALYLASDESRYVSGHNLVVDGGVT  297 (305)
Q Consensus       272 ~~v~~l~s~~~~~~tG~~i~idgG~~  297 (305)
                      +++..++.+...  .|..+++-|+..
T Consensus       176 ~~~~~~l~~~~~--~~~~~~l~g~~~  199 (285)
T TIGR03649       176 RVAYRALTDKVA--PNTDYVVLGPEL  199 (285)
T ss_pred             HHHHHHhcCCCc--CCCeEEeeCCcc
Confidence            999998876432  355666655543

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.30  E-value=4.4e-10  Score=120.16  Aligned_cols=224  Identities=16%  Similarity=0.082  Sum_probs=139.7

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcC----CeEEEEecCcchhhhHhhh---c---------CCCCeEEEEecCCCH---
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHG----AKVVIADVEDTLGSVLAST---L---------APAPVTFVHCDVSLE---   90 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g----~~vv~~~r~~~~~~~~~~~---~---------~~~~v~~~~~D~~d~---   90 (305)
                      +.++|+||||+|.||.++++.|++++    ++|+.+.|...........   .         ...++.++.+|+++.   
T Consensus       970 ~~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lg 1049 (1389)
T TIGR03443       970 TPITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFG 1049 (1389)
T ss_pred             CCceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCC
Confidence            35899999999999999999999887    6788777764332221111   0         013688999999753   


Q ss_pred             ---HHHHHHHHHHHHhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEe
Q 021960           91 ---EDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIIST  167 (305)
Q Consensus        91 ---~~i~~~~~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~i  167 (305)
                         +..+.+.       ..+|+|||||+....        ..+   +......|+.++.++++.+..    .+..+++++
T Consensus      1050 l~~~~~~~l~-------~~~d~iiH~Aa~~~~--------~~~---~~~~~~~nv~gt~~ll~~a~~----~~~~~~v~v 1107 (1389)
T TIGR03443      1050 LSDEKWSDLT-------NEVDVIIHNGALVHW--------VYP---YSKLRDANVIGTINVLNLCAE----GKAKQFSFV 1107 (1389)
T ss_pred             cCHHHHHHHH-------hcCCEEEECCcEecC--------ccC---HHHHHHhHHHHHHHHHHHHHh----CCCceEEEE
Confidence               2333222       368999999986521        112   333456799998888776643    344589999


Q ss_pred             cccccccC-----------------C-----------CCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCcccccc
Q 021960          168 ASVAGVMG-----------------G-----------LGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSM  219 (305)
Q Consensus       168 sS~~~~~~-----------------~-----------~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~  219 (305)
                      ||.+.+.+                 .           .....|+.+|.+.+.+++..+.    .|+.+..+.||.|..+.
T Consensus      1108 SS~~v~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~----~g~~~~i~Rpg~v~G~~ 1183 (1389)
T TIGR03443      1108 SSTSALDTEYYVNLSDELVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGK----RGLRGCIVRPGYVTGDS 1183 (1389)
T ss_pred             eCeeecCcccccchhhhhhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHh----CCCCEEEECCCccccCC
Confidence            99754311                 0           0124699999999999876543    48999999999997663


Q ss_pred             chhcccCCCCCchhhhhhccCCCcHHHHHHHH-HH--HhhcC--CCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecC
Q 021960          220 LVNAWRNSGDGEEEDECMNFGIPSQKEVRKME-EF--VSGLG--NLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDG  294 (305)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~--~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idg  294 (305)
                      ....+..                 .+.+..+. ..  ...+.  .....+..+++++++++.++........+.++++.+
T Consensus      1184 ~~g~~~~-----------------~~~~~~~~~~~~~~~~~p~~~~~~~~~~Vddva~ai~~~~~~~~~~~~~~i~~~~~ 1246 (1389)
T TIGR03443      1184 KTGATNT-----------------DDFLLRMLKGCIQLGLIPNINNTVNMVPVDHVARVVVAAALNPPKESELAVAHVTG 1246 (1389)
T ss_pred             CcCCCCc-----------------hhHHHHHHHHHHHhCCcCCCCCccccccHHHHHHHHHHHHhCCcccCCCCEEEeCC
Confidence            2221111                 11111111 11  01111  112446789999999999876543223345677766


Q ss_pred             Cc
Q 021960          295 GV  296 (305)
Q Consensus       295 G~  296 (305)
                      +.
T Consensus      1247 ~~ 1248 (1389)
T TIGR03443      1247 HP 1248 (1389)
T ss_pred             CC
Confidence            53

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=99.28  E-value=4.5e-10  Score=99.80  Aligned_cols=209  Identities=16%  Similarity=0.096  Sum_probs=116.2

Q ss_pred             EEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEEEEc
Q 021960           34 AIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILYNN  113 (305)
Q Consensus        34 vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~li~n  113 (305)
                      +|||||+|.||.++++.|+++|++|++++|+........    .  ..  ..|... ..       ..+....+|+|||+
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~--~~--~~~~~~-~~-------~~~~~~~~D~Vvh~   64 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTK----W--EG--YKPWAP-LA-------ESEALEGADAVINL   64 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCccc----c--ee--eecccc-cc-------hhhhcCCCCEEEEC
Confidence            589999999999999999999999999999765432211    0  11  112222 11       11223469999999


Q ss_pred             CCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCC--CEEEEecccccccCCC------------CC
Q 021960          114 AGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGG--GCIISTASVAGVMGGL------------GP  179 (305)
Q Consensus       114 ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--~~iv~isS~~~~~~~~------------~~  179 (305)
                      ||.....      ...+.+.....+++|+.++..+++.+..    .+.  ..+++.|+.. ..+..            ..
T Consensus        65 a~~~~~~------~~~~~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~~~~i~~S~~~-~yg~~~~~~~~E~~~~~~~  133 (292)
T TIGR01777        65 AGEPIAD------KRWTEERKQEIRDSRIDTTRALVEAIAA----AEQKPKVFISASAVG-YYGTSEDRVFTEEDSPAGD  133 (292)
T ss_pred             CCCCccc------ccCCHHHHHHHHhcccHHHHHHHHHHHh----cCCCceEEEEeeeEE-EeCCCCCCCcCcccCCCCC
Confidence            9964211      1234455667788999987776666643    332  2344444432 22211            01


Q ss_pred             ccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHH---hh
Q 021960          180 HAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFV---SG  256 (305)
Q Consensus       180 ~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~  256 (305)
                      ..|+..+...+...+    .+.+.++.+..+.|+.+..+... ...                   ..........   -.
T Consensus       134 ~~~~~~~~~~e~~~~----~~~~~~~~~~ilR~~~v~G~~~~-~~~-------------------~~~~~~~~~~~~~~g  189 (292)
T TIGR01777       134 DFLAELCRDWEEAAQ----AAEDLGTRVVLLRTGIVLGPKGG-ALA-------------------KMLPPFRLGLGGPLG  189 (292)
T ss_pred             ChHHHHHHHHHHHhh----hchhcCCceEEEeeeeEECCCcc-hhH-------------------HHHHHHhcCcccccC
Confidence            112223333333322    22345799999999999776310 000                   0000000000   00


Q ss_pred             cCCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCc
Q 021960          257 LGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGV  296 (305)
Q Consensus       257 ~~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~  296 (305)
                      .......++.++|+++++..++....  ..| ++++-++.
T Consensus       190 ~~~~~~~~i~v~Dva~~i~~~l~~~~--~~g-~~~~~~~~  226 (292)
T TIGR01777       190 SGRQWFSWIHIEDLVQLILFALENAS--ISG-PVNATAPE  226 (292)
T ss_pred             CCCcccccEeHHHHHHHHHHHhcCcc--cCC-ceEecCCC
Confidence            12233467899999999999987542  234 56665554

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PRK08309 short chain dehydrogenase; Provisional

Probab=99.23  E-value=1.5e-09  Score=89.57  Aligned_cols=84  Identities=17%  Similarity=0.231  Sum_probs=68.9

Q ss_pred             CEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc-CCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEE
Q 021960           32 KVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL-APAPVTFVHCDVSLEEDIENLINSTVSRYGRLDIL  110 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~-~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~l  110 (305)
                      ++++||||+ |+|.++++.|+++|++|++++|+....+.+...+ ...++.++.+|++|.+++.++++.+.+.++++|++
T Consensus         1 m~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~l   79 (177)
T PRK08309          1 MHALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNGPFDLA   79 (177)
T ss_pred             CEEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeEE
Confidence            368999998 6777899999999999999998866554443322 23468889999999999999999999988999999


Q ss_pred             EEcCCC
Q 021960          111 YNNAGV  116 (305)
Q Consensus       111 i~nag~  116 (305)
                      |+....
T Consensus        80 v~~vh~   85 (177)
T PRK08309         80 VAWIHS   85 (177)
T ss_pred             EEeccc
Confidence            987654

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.22  E-value=1.4e-09  Score=107.96  Aligned_cols=142  Identities=18%  Similarity=0.161  Sum_probs=98.9

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDI  109 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~  109 (305)
                      ..+++|||||+|.||+++++.|.++|+.|..                      ...|++|.+++.++++..     ++|+
T Consensus       379 ~~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~----------------------~~~~l~d~~~v~~~i~~~-----~pd~  431 (668)
T PLN02260        379 PSLKFLIYGRTGWIGGLLGKLCEKQGIAYEY----------------------GKGRLEDRSSLLADIRNV-----KPTH  431 (668)
T ss_pred             CCceEEEECCCchHHHHHHHHHHhCCCeEEe----------------------eccccccHHHHHHHHHhh-----CCCE
Confidence            3458999999999999999999999987631                      124678888887776654     6999


Q ss_pred             EEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEeccccccc-----------C---
Q 021960          110 LYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVM-----------G---  175 (305)
Q Consensus       110 li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~-----------~---  175 (305)
                      |||+|+.....     -.+...++.++.+++|+.++.++++.+..    .+ .+++++||.+.+.           +   
T Consensus       432 Vih~Aa~~~~~-----~~~~~~~~~~~~~~~N~~gt~~l~~a~~~----~g-~~~v~~Ss~~v~~~~~~~~~~~~~p~~E  501 (668)
T PLN02260        432 VFNAAGVTGRP-----NVDWCESHKVETIRANVVGTLTLADVCRE----NG-LLMMNFATGCIFEYDAKHPEGSGIGFKE  501 (668)
T ss_pred             EEECCcccCCC-----CCChHHhCHHHHHHHHhHHHHHHHHHHHH----cC-CeEEEEcccceecCCcccccccCCCCCc
Confidence            99999975321     01122345678889999999988888765    22 3566666643211           1   


Q ss_pred             ----CCCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEe
Q 021960          176 ----GLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCIS  211 (305)
Q Consensus       176 ----~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~  211 (305)
                          .+....|+.+|.+.+.+++.+...   ..+++..+.
T Consensus       502 ~~~~~~~~~~Yg~sK~~~E~~~~~~~~~---~~~r~~~~~  538 (668)
T PLN02260        502 EDKPNFTGSFYSKTKAMVEELLREYDNV---CTLRVRMPI  538 (668)
T ss_pred             CCCCCCCCChhhHHHHHHHHHHHhhhhh---eEEEEEEec
Confidence                112368999999999999876422   345655554

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.22  E-value=4.5e-10  Score=96.40  Aligned_cols=226  Identities=19%  Similarity=0.142  Sum_probs=149.7

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhH-----hh-hcCCCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           31 GKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVL-----AS-TLAPAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        31 ~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~-----~~-~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      +|++||||-+|--|.-+++.|++.|+.|..+.|+....+..     .. ...+.+++.+.+|++|..++.++++++    
T Consensus         2 ~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v----   77 (345)
T COG1089           2 GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEV----   77 (345)
T ss_pred             CceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhc----
Confidence            68999999999999999999999999999887763332211     11 113456899999999999999999988    


Q ss_pred             CCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccc-----------
Q 021960          105 GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGV-----------  173 (305)
Q Consensus       105 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~-----------  173 (305)
                       ++|-|.|.|+....        ..++++.+...+++..|+.+++.++.-+-  ....+|..-||.--+           
T Consensus        78 -~PdEIYNLaAQS~V--------~vSFe~P~~T~~~~~iGtlrlLEaiR~~~--~~~~rfYQAStSE~fG~v~~~pq~E~  146 (345)
T COG1089          78 -QPDEIYNLAAQSHV--------GVSFEQPEYTADVDAIGTLRLLEAIRILG--EKKTRFYQASTSELYGLVQEIPQKET  146 (345)
T ss_pred             -Cchhheeccccccc--------cccccCcceeeeechhHHHHHHHHHHHhC--CcccEEEecccHHhhcCcccCccccC
Confidence             68999998886543        45677777888999999999998875433  334677766653211           


Q ss_pred             cCCCCCccchhhHHHHHHHHHHHHHHHC---cCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHH
Q 021960          174 MGGLGPHAYTASKHAIVGLTKNAACELG---RYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKM  250 (305)
Q Consensus       174 ~~~~~~~~Y~~sKaa~~~~~~~la~e~~---~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (305)
                      -|.-+.++|+++|..-.-++..++..|+   ..||-+|-=+|      ...+.+-.                 ......+
T Consensus       147 TPFyPrSPYAvAKlYa~W~tvNYResYgl~AcnGILFNHESP------~Rge~FVT-----------------RKIt~av  203 (345)
T COG1089         147 TPFYPRSPYAVAKLYAYWITVNYRESYGLFACNGILFNHESP------LRGETFVT-----------------RKITRAV  203 (345)
T ss_pred             CCCCCCCHHHHHHHHHHheeeehHhhcCceeecceeecCCCC------CCccceeh-----------------HHHHHHH
Confidence            1233568999999999888888777653   34555553333      22111111                 0111111


Q ss_pred             HHHHhhc--------CCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          251 EEFVSGL--------GNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       251 ~~~~~~~--------~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      .....+.        -...+.++-..|.+++.+.++..+    ....+.+.-|.+.
T Consensus       204 a~Ik~G~q~~l~lGNldAkRDWG~A~DYVe~mwlmLQq~----~PddyViATg~t~  255 (345)
T COG1089         204 ARIKLGLQDKLYLGNLDAKRDWGHAKDYVEAMWLMLQQE----EPDDYVIATGETH  255 (345)
T ss_pred             HHHHccccceEEeccccccccccchHHHHHHHHHHHccC----CCCceEEecCcee
Confidence            1111110        123456777889999998888765    2555555555544

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.22  E-value=6.4e-10  Score=107.60  Aligned_cols=241  Identities=13%  Similarity=0.075  Sum_probs=142.6

Q ss_pred             cCCCCCCCCCCCCEEEEecCCCchHHHHHHHHHHcCC---eEEEEecCcchh---hhHhhh-------------cC----
Q 021960           20 DDAPPSHRRLEGKVAIITGGARGIGEAAVRLFARHGA---KVVIADVEDTLG---SVLAST-------------LA----   76 (305)
Q Consensus        20 ~~~~~~~~~l~~k~vlVtGas~giG~~ia~~l~~~g~---~vv~~~r~~~~~---~~~~~~-------------~~----   76 (305)
                      ++.......+++|+|+||||||.||+.+++.|++.+.   +|+++.|.....   +.+...             ..    
T Consensus       108 ~~~~~I~~f~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~  187 (605)
T PLN02503        108 ADGIGIAEFLRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQ  187 (605)
T ss_pred             cCCcchhhhhcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCcccc
Confidence            3444445567899999999999999999999998653   567776643321   111100             01    


Q ss_pred             ---CCCeEEEEecCCCH------HHHHHHHHHHHHhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHH
Q 021960           77 ---PAPVTFVHCDVSLE------EDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMAL  147 (305)
Q Consensus        77 ---~~~v~~~~~D~~d~------~~i~~~~~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~  147 (305)
                         ..++..+..|+++.      +..+.+.+       .+|+|||+|+....          + +.++..+++|+.++.+
T Consensus       188 ~~~~~Ki~~v~GDl~d~~LGLs~~~~~~L~~-------~vDiVIH~AA~v~f----------~-~~~~~a~~vNV~GT~n  249 (605)
T PLN02503        188 SFMLSKLVPVVGNVCESNLGLEPDLADEIAK-------EVDVIINSAANTTF----------D-ERYDVAIDINTRGPCH  249 (605)
T ss_pred             ccccccEEEEEeeCCCcccCCCHHHHHHHHh-------cCCEEEECcccccc----------c-cCHHHHHHHHHHHHHH
Confidence               24688999999986      23333332       59999999987521          1 3467788999999988


Q ss_pred             HHHHHHHHHHcCCCCEEEEecccccccC---------CC-----------------------------------------
Q 021960          148 GIKHAARVMINRGGGCIISTASVAGVMG---------GL-----------------------------------------  177 (305)
Q Consensus       148 l~~~~~~~~~~~~~~~iv~isS~~~~~~---------~~-----------------------------------------  177 (305)
                      +++.+...   ....++|++||....-.         .+                                         
T Consensus       250 LLelA~~~---~~lk~fV~vSTayVyG~~~G~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~  326 (605)
T PLN02503        250 LMSFAKKC---KKLKLFLQVSTAYVNGQRQGRIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQS  326 (605)
T ss_pred             HHHHHHHc---CCCCeEEEccCceeecCCCCeeeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccch
Confidence            88776542   22346888888543210         11                                         


Q ss_pred             -------------------CCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhc
Q 021960          178 -------------------GPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMN  238 (305)
Q Consensus       178 -------------------~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~  238 (305)
                                         ....|..+|+..|.+++..+     .++.+..|.|+.|.+.+ ++-+++-.+..      .
T Consensus       327 ~~~~~~l~~~g~~~~~~~~~pNtYt~TK~lAE~lV~~~~-----~~LPv~IvRPsiV~st~-~eP~pGw~d~~------~  394 (605)
T PLN02503        327 NSFAQKMKDLGLERAKLYGWQDTYVFTKAMGEMVINSMR-----GDIPVVIIRPSVIESTW-KDPFPGWMEGN------R  394 (605)
T ss_pred             HHHHHHhhhcccchhhhCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEcCCEecccc-cCCccccccCc------c
Confidence                               01468888888888876422     36999999999996643 22222211100      0


Q ss_pred             cCCCcHHHHHHHHHHHh---hcCCCCCCCCCHHHHHHHHHHhccC-C-CCceeccEEEecCC
Q 021960          239 FGIPSQKEVRKMEEFVS---GLGNLKGTTLRSKDIAEAALYLASD-E-SRYVSGHNLVVDGG  295 (305)
Q Consensus       239 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~dva~~v~~l~s~-~-~~~~tG~~i~idgG  295 (305)
                      ...|.-  .......+.   .-....-.++.+|-|+++++..+.. . ....+++++++..+
T Consensus       395 ~~~p~~--~~~g~G~lr~~~~~~~~~~DiVPVD~vvna~i~a~a~~~~~~~~~~~vYn~ts~  454 (605)
T PLN02503        395 MMDPIV--LYYGKGQLTGFLADPNGVLDVVPADMVVNATLAAMAKHGGAAKPEINVYQIASS  454 (605)
T ss_pred             ccchhh--hheeccceeEEEeCCCeeEeEEeecHHHHHHHHHHHhhhcccCCCCCEEEeCCC
Confidence            000100  000000000   0011223457888999988777321 1 11236889998766

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.21  E-value=4.7e-10  Score=106.28  Aligned_cols=156  Identities=21%  Similarity=0.224  Sum_probs=112.6

Q ss_pred             EecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEEEEcCC
Q 021960           36 ITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAG  115 (305)
Q Consensus        36 VtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~li~nag  115 (305)
                      |+||++|+|.++++.|...|+.|+...+......                 .              ....+++.+|+-+-
T Consensus        43 l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~~-----------------~--------------~~~~~~~~~~~d~~   91 (450)
T PRK08261         43 LVGGAGRLAEALAALLAGLGYDVVANNDGGLTWA-----------------A--------------GWGDRFGALVFDAT   91 (450)
T ss_pred             EEccCchhHHHHHHHHhhCCCeeeecCccccccc-----------------c--------------CcCCcccEEEEECC
Confidence            7778899999999999999999998755433110                 0              00113444443222


Q ss_pred             CCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhHHHHHHHHHH
Q 021960          116 VLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKN  195 (305)
Q Consensus       116 ~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~~~~  195 (305)
                      ..           .+.+++        .+.+.+++..++.|  ...|+||+++|.....   ....|+++|+++.+++|+
T Consensus        92 ~~-----------~~~~~l--------~~~~~~~~~~l~~l--~~~griv~i~s~~~~~---~~~~~~~akaal~gl~rs  147 (450)
T PRK08261         92 GI-----------TDPADL--------KALYEFFHPVLRSL--APCGRVVVLGRPPEAA---ADPAAAAAQRALEGFTRS  147 (450)
T ss_pred             CC-----------CCHHHH--------HHHHHHHHHHHHhc--cCCCEEEEEccccccC---CchHHHHHHHHHHHHHHH
Confidence            11           112222        23345566777777  3457999999987653   334699999999999999


Q ss_pred             HHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHH
Q 021960          196 AACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSKDIAEAAL  275 (305)
Q Consensus       196 la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~  275 (305)
                      +++|+ +++++++.|.|+.                                                  ..++++++.+.
T Consensus       148 la~E~-~~gi~v~~i~~~~--------------------------------------------------~~~~~~~~~~~  176 (450)
T PRK08261        148 LGKEL-RRGATAQLVYVAP--------------------------------------------------GAEAGLESTLR  176 (450)
T ss_pred             HHHHh-hcCCEEEEEecCC--------------------------------------------------CCHHHHHHHHH
Confidence            99999 7799999998864                                                  12568888999


Q ss_pred             HhccCCCCceeccEEEecCCcc
Q 021960          276 YLASDESRYVSGHNLVVDGGVT  297 (305)
Q Consensus       276 ~l~s~~~~~~tG~~i~idgG~~  297 (305)
                      |++++...+++|+++.++++..
T Consensus       177 ~l~s~~~a~~~g~~i~~~~~~~  198 (450)
T PRK08261        177 FFLSPRSAYVSGQVVRVGAADA  198 (450)
T ss_pred             HhcCCccCCccCcEEEecCCcc
Confidence            9999999999999999999864

>PLN00016 RNA-binding protein; Provisional

Probab=99.21  E-value=6e-10  Score=103.18  Aligned_cols=204  Identities=16%  Similarity=0.139  Sum_probs=122.8

Q ss_pred             CCCEEEEe----cCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhh-------hcCCCCeEEEEecCCCHHHHHHHHH
Q 021960           30 EGKVAIIT----GGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLAS-------TLAPAPVTFVHCDVSLEEDIENLIN   98 (305)
Q Consensus        30 ~~k~vlVt----Gas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~-------~~~~~~v~~~~~D~~d~~~i~~~~~   98 (305)
                      ..++||||    ||+|.||.++++.|+++|++|+++.|+.........       .+....+.++.+|+.|   +.+++.
T Consensus        51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d---~~~~~~  127 (378)
T PLN00016         51 EKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPAD---VKSKVA  127 (378)
T ss_pred             ccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHH---HHhhhc
Confidence            35789999    999999999999999999999999987654221110       1112237788888876   333331


Q ss_pred             HHHHhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCC
Q 021960           99 STVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLG  178 (305)
Q Consensus        99 ~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~  178 (305)
                           ...+|+|||+++.             +.           .+    ++.++..+.+.+..++|++||...+.....
T Consensus       128 -----~~~~d~Vi~~~~~-------------~~-----------~~----~~~ll~aa~~~gvkr~V~~SS~~vyg~~~~  174 (378)
T PLN00016        128 -----GAGFDVVYDNNGK-------------DL-----------DE----VEPVADWAKSPGLKQFLFCSSAGVYKKSDE  174 (378)
T ss_pred             -----cCCccEEEeCCCC-------------CH-----------HH----HHHHHHHHHHcCCCEEEEEccHhhcCCCCC
Confidence                 1269999998762             11           11    122333344456679999999765432110


Q ss_pred             --------CccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHH
Q 021960          179 --------PHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKM  250 (305)
Q Consensus       179 --------~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (305)
                              ...+ .+|...+.+.+       ..++.+..+.|+.+..+......                  ....+..+
T Consensus       175 ~p~~E~~~~~p~-~sK~~~E~~l~-------~~~l~~~ilRp~~vyG~~~~~~~------------------~~~~~~~~  228 (378)
T PLN00016        175 PPHVEGDAVKPK-AGHLEVEAYLQ-------KLGVNWTSFRPQYIYGPGNNKDC------------------EEWFFDRL  228 (378)
T ss_pred             CCCCCCCcCCCc-chHHHHHHHHH-------HcCCCeEEEeceeEECCCCCCch------------------HHHHHHHH
Confidence                    0112 27888776643       24789999999999876421100                  00000111


Q ss_pred             HHH--H--hhcCCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCcc
Q 021960          251 EEF--V--SGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT  297 (305)
Q Consensus       251 ~~~--~--~~~~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~  297 (305)
                      ..-  .  -..+.....++..+|+++++..++....  ..|+++++-++..
T Consensus       229 ~~~~~i~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~--~~~~~yni~~~~~  277 (378)
T PLN00016        229 VRGRPVPIPGSGIQLTQLGHVKDLASMFALVVGNPK--AAGQIFNIVSDRA  277 (378)
T ss_pred             HcCCceeecCCCCeeeceecHHHHHHHHHHHhcCcc--ccCCEEEecCCCc
Confidence            000  0  0001122346679999999999887642  3578899887753

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.17  E-value=9.2e-10  Score=98.60  Aligned_cols=162  Identities=20%  Similarity=0.176  Sum_probs=114.5

Q ss_pred             CEEEEecCCCchHHHHHHHHHHc-CCeEEEEecCcch---hhhHhhh---------cCCCCeEEEEecCC------CHHH
Q 021960           32 KVAIITGGARGIGEAAVRLFARH-GAKVVIADVEDTL---GSVLAST---------LAPAPVTFVHCDVS------LEED   92 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~-g~~vv~~~r~~~~---~~~~~~~---------~~~~~v~~~~~D~~------d~~~   92 (305)
                      +++++|||||.+|..+..+|..+ .++|+.+-|.+..   .+.+.+.         ....++..+..|++      +...
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~   80 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT   80 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence            47999999999999999998865 4588877664442   2222222         23568999999998      4455


Q ss_pred             HHHHHHHHHHhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEeccccc
Q 021960           93 IENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAG  172 (305)
Q Consensus        93 i~~~~~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~  172 (305)
                      .+++.+       .+|.||||++.....           .-+.+....|+.|+..+++.+.    ..+...+.++||++.
T Consensus        81 ~~~La~-------~vD~I~H~gA~Vn~v-----------~pYs~L~~~NVlGT~evlrLa~----~gk~Kp~~yVSsisv  138 (382)
T COG3320          81 WQELAE-------NVDLIIHNAALVNHV-----------FPYSELRGANVLGTAEVLRLAA----TGKPKPLHYVSSISV  138 (382)
T ss_pred             HHHHhh-------hcceEEecchhhccc-----------CcHHHhcCcchHhHHHHHHHHh----cCCCceeEEEeeeee
Confidence            555554       689999999875321           2356677899999866555543    233445889999875


Q ss_pred             ccCC--------------------CCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCcccccc
Q 021960          173 VMGG--------------------LGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSM  219 (305)
Q Consensus       173 ~~~~--------------------~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~  219 (305)
                      ....                    ...+.|+-||.+.|.+++....    .|.++..+.||+|-.+-
T Consensus       139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~~----rGLpv~I~Rpg~I~gds  201 (382)
T COG3320         139 GETEYYSNFTVDFDEISPTRNVGQGLAGGYGRSKWVAEKLVREAGD----RGLPVTIFRPGYITGDS  201 (382)
T ss_pred             ccccccCCCccccccccccccccCccCCCcchhHHHHHHHHHHHhh----cCCCeEEEecCeeeccC
Confidence            4321                    1126899999999999876553    48999999999996654

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=99.14  E-value=7.7e-10  Score=94.92  Aligned_cols=225  Identities=17%  Similarity=0.089  Sum_probs=147.8

Q ss_pred             CEEEEecCCCchHHHHHHHHHHc--CCeEEEEec---CcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCC
Q 021960           32 KVAIITGGARGIGEAAVRLFARH--GAKVVIADV---EDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGR  106 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~--g~~vv~~~r---~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~  106 (305)
                      +.++||||.|.||..++..++..  .++.+..+-   ... ...+++.....+..++..|+.+...+..++.+     .+
T Consensus         7 ~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~-~~~l~~~~n~p~ykfv~~di~~~~~~~~~~~~-----~~   80 (331)
T KOG0747|consen    7 KNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSN-LKNLEPVRNSPNYKFVEGDIADADLVLYLFET-----EE   80 (331)
T ss_pred             ceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccc-cchhhhhccCCCceEeeccccchHHHHhhhcc-----Cc
Confidence            78999999999999999999875  344433321   111 33333344456788999999998777766543     37


Q ss_pred             ccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccC-----------
Q 021960          107 LDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMG-----------  175 (305)
Q Consensus       107 id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~-----------  175 (305)
                      +|.|||.|+.....        .+.-+--+.+..|++++..|++......   +-.++|++|+..-+-.           
T Consensus        81 id~vihfaa~t~vd--------~s~~~~~~~~~nnil~t~~Lle~~~~sg---~i~~fvhvSTdeVYGds~~~~~~~E~s  149 (331)
T KOG0747|consen   81 IDTVIHFAAQTHVD--------RSFGDSFEFTKNNILSTHVLLEAVRVSG---NIRRFVHVSTDEVYGDSDEDAVVGEAS  149 (331)
T ss_pred             hhhhhhhHhhhhhh--------hhcCchHHHhcCCchhhhhHHHHHHhcc---CeeEEEEecccceecCccccccccccc
Confidence            99999999865432        1222334556789999888888776532   3358999998543211           


Q ss_pred             -CCCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHH--
Q 021960          176 -GLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEE--  252 (305)
Q Consensus       176 -~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  252 (305)
                       ......|+++|+|.+++++++...|   |+.+..+.-+.|..|-....        +.       +|  ..++....  
T Consensus       150 ~~nPtnpyAasKaAaE~~v~Sy~~sy---~lpvv~~R~nnVYGP~q~~~--------kl-------ip--kFi~l~~~~~  209 (331)
T KOG0747|consen  150 LLNPTNPYAASKAAAEMLVRSYGRSY---GLPVVTTRMNNVYGPNQYPE--------KL-------IP--KFIKLAMRGK  209 (331)
T ss_pred             cCCCCCchHHHHHHHHHHHHHHhhcc---CCcEEEEeccCccCCCcChH--------HH-------hH--HHHHHHHhCC
Confidence             1234689999999999999999885   78888888888877642211        00       00  11111100  


Q ss_pred             --HHhhcCCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCc
Q 021960          253 --FVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGV  296 (305)
Q Consensus       253 --~~~~~~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~  296 (305)
                        -..+-+...+.++-++|+.+++-..+....   .|++++|..-.
T Consensus       210 ~~~i~g~g~~~rs~l~veD~~ea~~~v~~Kg~---~geIYNIgtd~  252 (331)
T KOG0747|consen  210 EYPIHGDGLQTRSYLYVEDVSEAFKAVLEKGE---LGEIYNIGTDD  252 (331)
T ss_pred             CcceecCcccceeeEeHHHHHHHHHHHHhcCC---ccceeeccCcc
Confidence              011113345567889999999988887742   69999986543

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=99.12  E-value=2.2e-10  Score=98.38  Aligned_cols=101  Identities=16%  Similarity=0.172  Sum_probs=76.3

Q ss_pred             EEEEecC-CCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEEE
Q 021960           33 VAIITGG-ARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILY  111 (305)
Q Consensus        33 ~vlVtGa-s~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~li  111 (305)
                      +=.||.. |||||+++|+.|+++|++|+++++...    .. .     .....+|+++.++++++++++.+.++++|++|
T Consensus        16 VR~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~----l~-~-----~~~~~~Dv~d~~s~~~l~~~v~~~~g~iDiLV   85 (227)
T TIGR02114        16 VRSITNHSTGHLGKIITETFLSAGHEVTLVTTKRA----LK-P-----EPHPNLSIREIETTKDLLITLKELVQEHDILI   85 (227)
T ss_pred             ceeecCCcccHHHHHHHHHHHHCCCEEEEEcChhh----cc-c-----ccCCcceeecHHHHHHHHHHHHHHcCCCCEEE
Confidence            4466654 789999999999999999999876321    10 0     01145899999999999999999999999999


Q ss_pred             EcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHH
Q 021960          112 NNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIK  150 (305)
Q Consensus       112 ~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  150 (305)
                      ||||....    .++.+.+.++|++++..   +.+++.+
T Consensus        86 nnAgv~d~----~~~~~~s~e~~~~~~~~---~~~~~~~  117 (227)
T TIGR02114        86 HSMAVSDY----TPVYMTDLEQVQASDNL---NEFLSKQ  117 (227)
T ss_pred             ECCEeccc----cchhhCCHHHHhhhcch---hhhhccc
Confidence            99997532    56778888999877444   4455444

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>PRK12320 hypothetical protein; Provisional

Probab=99.10  E-value=1.2e-08  Score=100.12  Aligned_cols=188  Identities=17%  Similarity=0.165  Sum_probs=117.5

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEEEE
Q 021960           33 VAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILYN  112 (305)
Q Consensus        33 ~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~li~  112 (305)
                      ++|||||+|.||+++++.|.++|++|++++|.....       ....+.++.+|++|.. +.+++       ..+|+|||
T Consensus         2 kILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~-------~~~~ve~v~~Dl~d~~-l~~al-------~~~D~VIH   66 (699)
T PRK12320          2 QILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDA-------LDPRVDYVCASLRNPV-LQELA-------GEADAVIH   66 (699)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhc-------ccCCceEEEccCCCHH-HHHHh-------cCCCEEEE
Confidence            689999999999999999999999999998864321       1234788999999873 33332       25899999


Q ss_pred             cCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhHHHHHHH
Q 021960          113 NAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGL  192 (305)
Q Consensus       113 nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~  192 (305)
                      +|+....          .      ...+|+.++.++++++..    .+ .++|++||..+   .+  ..|.    ..+.+
T Consensus        67 LAa~~~~----------~------~~~vNv~Gt~nLleAA~~----~G-vRiV~~SS~~G---~~--~~~~----~aE~l  116 (699)
T PRK12320         67 LAPVDTS----------A------PGGVGITGLAHVANAAAR----AG-ARLLFVSQAAG---RP--ELYR----QAETL  116 (699)
T ss_pred             cCccCcc----------c------hhhHHHHHHHHHHHHHHH----cC-CeEEEEECCCC---CC--cccc----HHHHH
Confidence            9985311          0      114788888777776643    33 47999998642   11  1232    12222


Q ss_pred             HHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhh-c-CCCCCCCCCHHHH
Q 021960          193 TKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSG-L-GNLKGTTLRSKDI  270 (305)
Q Consensus       193 ~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~dv  270 (305)
                      +    ..   .++.+..+.|+.+..+...  +.                    ....+..+... . ..+. .+.-.+|+
T Consensus       117 l----~~---~~~p~~ILR~~nVYGp~~~--~~--------------------~~r~I~~~l~~~~~~~pI-~vIyVdDv  166 (699)
T PRK12320        117 V----ST---GWAPSLVIRIAPPVGRQLD--WM--------------------VCRTVATLLRSKVSARPI-RVLHLDDL  166 (699)
T ss_pred             H----Hh---cCCCEEEEeCceecCCCCc--cc--------------------HhHHHHHHHHHHHcCCce-EEEEHHHH
Confidence            2    22   3477788888888765210  00                    00011111110 0 1111 12478999


Q ss_pred             HHHHHHhccCCCCceeccEEEecCCcccc
Q 021960          271 AEAALYLASDESRYVSGHNLVVDGGVTTS  299 (305)
Q Consensus       271 a~~v~~l~s~~~~~~tG~~i~idgG~~~~  299 (305)
                      +++++.+++..   .+| ++++.||...+
T Consensus       167 v~alv~al~~~---~~G-iyNIG~~~~~S  191 (699)
T PRK12320        167 VRFLVLALNTD---RNG-VVDLATPDTTN  191 (699)
T ss_pred             HHHHHHHHhCC---CCC-EEEEeCCCeeE
Confidence            99998888653   245 89999886543

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=99.00  E-value=1.2e-08  Score=87.59  Aligned_cols=205  Identities=20%  Similarity=0.180  Sum_probs=119.8

Q ss_pred             EEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEEEEc
Q 021960           34 AIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILYNN  113 (305)
Q Consensus        34 vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~li~n  113 (305)
                      ++||||||-||++++..|.+.|+.|.++.|+....+..        +...   +...+.+....+      ..+|+|||.
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~--------~~~~---v~~~~~~~~~~~------~~~DavINL   63 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQN--------LHPN---VTLWEGLADALT------LGIDAVINL   63 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhh--------cCcc---ccccchhhhccc------CCCCEEEEC
Confidence            58999999999999999999999999999987654421        1111   111122222211      169999999


Q ss_pred             CCCCCCCCCCCcccC-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhH----HH
Q 021960          114 AGVLGNQRKHKSIID-FDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASK----HA  188 (305)
Q Consensus       114 ag~~~~~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK----aa  188 (305)
                      ||..-.       .. .+.+.=++.++.-+..+-.+++.+..   .+.+.++..-+|..++.+......|.-..    -.
T Consensus        64 AG~~I~-------~rrWt~~~K~~i~~SRi~~T~~L~e~I~~---~~~~P~~~isaSAvGyYG~~~~~~~tE~~~~g~~F  133 (297)
T COG1090          64 AGEPIA-------ERRWTEKQKEEIRQSRINTTEKLVELIAA---SETKPKVLISASAVGYYGHSGDRVVTEESPPGDDF  133 (297)
T ss_pred             CCCccc-------cccCCHHHHHHHHHHHhHHHHHHHHHHHh---ccCCCcEEEecceEEEecCCCceeeecCCCCCCCh
Confidence            996322       22 46666667776666665444444332   12334455556777787765544443332    34


Q ss_pred             HHHHHHHHHHHH---CcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHH-hhc--CCCCC
Q 021960          189 IVGLTKNAACEL---GRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFV-SGL--GNLKG  262 (305)
Q Consensus       189 ~~~~~~~la~e~---~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~  262 (305)
                      +..+++.+-.+.   ...|+||..+.-|.|-++-.... ..                   ....+.-.+ .++  +...-
T Consensus       134 la~lc~~WE~~a~~a~~~gtRvvllRtGvVLs~~GGaL-~~-------------------m~~~fk~glGG~~GsGrQ~~  193 (297)
T COG1090         134 LAQLCQDWEEEALQAQQLGTRVVLLRTGVVLSPDGGAL-GK-------------------MLPLFKLGLGGKLGSGRQWF  193 (297)
T ss_pred             HHHHHHHHHHHHhhhhhcCceEEEEEEEEEecCCCcch-hh-------------------hcchhhhccCCccCCCCcee
Confidence            445555544443   24589999999998876421100 00                   000111111 000  12222


Q ss_pred             CCCCHHHHHHHHHHhccCCCCceec
Q 021960          263 TTLRSKDIAEAALYLASDESRYVSG  287 (305)
Q Consensus       263 ~~~~~~dva~~v~~l~s~~~~~~tG  287 (305)
                      .+...||+++.+.|++.++.  ++|
T Consensus       194 SWIhieD~v~~I~fll~~~~--lsG  216 (297)
T COG1090         194 SWIHIEDLVNAILFLLENEQ--LSG  216 (297)
T ss_pred             eeeeHHHHHHHHHHHHhCcC--CCC
Confidence            35789999999999998752  555

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=98.86  E-value=4.6e-08  Score=84.21  Aligned_cols=163  Identities=20%  Similarity=0.144  Sum_probs=110.1

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcch-hhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 021960           29 LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTL-GSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRL  107 (305)
Q Consensus        29 l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~-~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~i  107 (305)
                      .++.+++||||.|.||+++|..|..+|+.|++++.-... .....-.....++..+.-|+...     ++.       .+
T Consensus        25 ~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~~~~~fel~~hdv~~p-----l~~-------ev   92 (350)
T KOG1429|consen   25 SQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWIGHPNFELIRHDVVEP-----LLK-------EV   92 (350)
T ss_pred             CCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhccCcceeEEEeechhH-----HHH-------Hh
Confidence            356899999999999999999999999999998753222 22222222345577777777653     443       36


Q ss_pred             cEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccc--------------
Q 021960          108 DILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGV--------------  173 (305)
Q Consensus       108 d~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~--------------  173 (305)
                      |.++|.|....+...   .     -.--+.+..|++++.+.+..+.+.     +.|+++.|+..-+              
T Consensus        93 D~IyhLAapasp~~y---~-----~npvktIktN~igtln~lglakrv-----~aR~l~aSTseVYgdp~~hpq~e~ywg  159 (350)
T KOG1429|consen   93 DQIYHLAAPASPPHY---K-----YNPVKTIKTNVIGTLNMLGLAKRV-----GARFLLASTSEVYGDPLVHPQVETYWG  159 (350)
T ss_pred             hhhhhhccCCCCccc---c-----cCccceeeecchhhHHHHHHHHHh-----CceEEEeecccccCCcccCCCcccccc
Confidence            778888876544210   0     112345678888888777766543     3678877764432              


Q ss_pred             --cCCCCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCcccccc
Q 021960          174 --MGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSM  219 (305)
Q Consensus       174 --~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~  219 (305)
                        .|....+.|...|.+.+.++....++   .||.+....+..+..|.
T Consensus       160 ~vnpigpr~cydegKr~aE~L~~~y~k~---~giE~rIaRifNtyGPr  204 (350)
T KOG1429|consen  160 NVNPIGPRSCYDEGKRVAETLCYAYHKQ---EGIEVRIARIFNTYGPR  204 (350)
T ss_pred             ccCcCCchhhhhHHHHHHHHHHHHhhcc---cCcEEEEEeeecccCCc
Confidence              11223468999999999999888777   57888777776666653

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=98.82  E-value=6.7e-08  Score=83.33  Aligned_cols=205  Identities=16%  Similarity=0.162  Sum_probs=117.9

Q ss_pred             EEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEEEEc
Q 021960           34 AIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILYNN  113 (305)
Q Consensus        34 vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~li~n  113 (305)
                      |+|+||+|.+|+.+++.|.+.+++|.++.|+.......  .+....+.++.+|+.|.+++.++++       .+|.||++
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~--~l~~~g~~vv~~d~~~~~~l~~al~-------g~d~v~~~   71 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQ--QLQALGAEVVEADYDDPESLVAALK-------GVDAVFSV   71 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHH--HHHHTTTEEEES-TT-HHHHHHHHT-------TCSEEEEE
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhh--hhhcccceEeecccCCHHHHHHHHc-------CCceEEee
Confidence            68999999999999999999999999999987432211  1111225678999999999988876       79999998


Q ss_pred             CCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCC--C--CccchhhHHHH
Q 021960          114 AGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGL--G--PHAYTASKHAI  189 (305)
Q Consensus       114 ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~--~--~~~Y~~sKaa~  189 (305)
                      .+....          ..          +.....+++++..    .+-.++|+ ||........  .  ....-..|..+
T Consensus        72 ~~~~~~----------~~----------~~~~~~li~Aa~~----agVk~~v~-ss~~~~~~~~~~~~p~~~~~~~k~~i  126 (233)
T PF05368_consen   72 TPPSHP----------SE----------LEQQKNLIDAAKA----AGVKHFVP-SSFGADYDESSGSEPEIPHFDQKAEI  126 (233)
T ss_dssp             SSCSCC----------CH----------HHHHHHHHHHHHH----HT-SEEEE-SEESSGTTTTTTSTTHHHHHHHHHHH
T ss_pred             cCcchh----------hh----------hhhhhhHHHhhhc----cccceEEE-EEecccccccccccccchhhhhhhhh
Confidence            775321          11          1112233444433    34456764 5544333211  1  12233456666


Q ss_pred             HHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCC-CHH
Q 021960          190 VGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL-RSK  268 (305)
Q Consensus       190 ~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  268 (305)
                      +.+.+.       .++....|.||+....+................ .....+               ......+. +.+
T Consensus       127 e~~l~~-------~~i~~t~i~~g~f~e~~~~~~~~~~~~~~~~~~-~~~~~~---------------~~~~~~~~~~~~  183 (233)
T PF05368_consen  127 EEYLRE-------SGIPYTIIRPGFFMENLLPPFAPVVDIKKSKDV-VTLPGP---------------GNQKAVPVTDTR  183 (233)
T ss_dssp             HHHHHH-------CTSEBEEEEE-EEHHHHHTTTHHTTCSCCTSSE-EEEETT---------------STSEEEEEEHHH
T ss_pred             hhhhhh-------ccccceeccccchhhhhhhhhcccccccccceE-EEEccC---------------CCccccccccHH
Confidence            544433       378889999998776654322221000000000 000000               01112333 789


Q ss_pred             HHHHHHHHhccCCCCceeccEEEecCC
Q 021960          269 DIAEAALYLASDESRYVSGHNLVVDGG  295 (305)
Q Consensus       269 dva~~v~~l~s~~~~~~tG~~i~idgG  295 (305)
                      |+++.+..++.+...+-.|..+.+.|.
T Consensus       184 Dvg~~va~il~~p~~~~~~~~~~~~~~  210 (233)
T PF05368_consen  184 DVGRAVAAILLDPEKHNNGKTIFLAGE  210 (233)
T ss_dssp             HHHHHHHHHHHSGGGTTEEEEEEEGGG
T ss_pred             HHHHHHHHHHcChHHhcCCEEEEeCCC
Confidence            999999999988665547888887653

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=98.68  E-value=6.6e-07  Score=74.72  Aligned_cols=199  Identities=17%  Similarity=0.189  Sum_probs=120.4

Q ss_pred             CEEEEecCCCchHHHHHHHHHHcCC---eEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 021960           32 KVAIITGGARGIGEAAVRLFARHGA---KVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLD  108 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~g~---~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id  108 (305)
                      ++++|||++|=+|++|.+.+.+.|.   +.++.+.+                   .+|+++..+.+.++++.     ++.
T Consensus         2 ~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~sk-------------------d~DLt~~a~t~~lF~~e-----kPt   57 (315)
T KOG1431|consen    2 KKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGSK-------------------DADLTNLADTRALFESE-----KPT   57 (315)
T ss_pred             ceEEEecCCchHHHHHHHHHHhcCCCCcceEEeccc-------------------cccccchHHHHHHHhcc-----CCc
Confidence            6899999999999999999999875   23333322                   36999999999999865     789


Q ss_pred             EEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccc-----c---------
Q 021960          109 ILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGV-----M---------  174 (305)
Q Consensus       109 ~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~-----~---------  174 (305)
                      +|||.|+..+..   ..-...+.+-|.+.+++|-    +.++.+..    .+..++|+..|.+-+     .         
T Consensus        58 hVIhlAAmVGGl---f~N~~ynldF~r~Nl~ind----NVlhsa~e----~gv~K~vsclStCIfPdkt~yPIdEtmvh~  126 (315)
T KOG1431|consen   58 HVIHLAAMVGGL---FHNNTYNLDFIRKNLQIND----NVLHSAHE----HGVKKVVSCLSTCIFPDKTSYPIDETMVHN  126 (315)
T ss_pred             eeeehHhhhcch---hhcCCCchHHHhhcceech----hHHHHHHH----hchhhhhhhcceeecCCCCCCCCCHHHhcc
Confidence            999999866431   0111224445554444433    33333322    233345554443322     1         


Q ss_pred             --CCCCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHH
Q 021960          175 --GGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEE  252 (305)
Q Consensus       175 --~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (305)
                        +.+.+..|+-+|..+.-..+.++.++   |-...++.|-.+..|-.. +.+..+          +-+|  --+.++.+
T Consensus       127 gpphpsN~gYsyAKr~idv~n~aY~~qh---g~~~tsviPtNvfGphDN-fnpe~s----------HVlP--ali~r~h~  190 (315)
T KOG1431|consen  127 GPPHPSNFGYSYAKRMIDVQNQAYRQQH---GRDYTSVIPTNVFGPHDN-FNPENS----------HVLP--ALIHRFHE  190 (315)
T ss_pred             CCCCCCchHHHHHHHHHHHHHHHHHHHh---CCceeeeccccccCCCCC-CCcccc----------cchH--HHHHHHHH
Confidence              23456689999998888888888885   556677777766665311 111100          0011  11111111


Q ss_pred             HHh---------hcCCCCCCCCCHHHHHHHHHHhccCC
Q 021960          253 FVS---------GLGNLKGTTLRSKDIAEAALYLASDE  281 (305)
Q Consensus       253 ~~~---------~~~~~~~~~~~~~dva~~v~~l~s~~  281 (305)
                      ...         +-+.|.+.++-.+|+|+..+|++.+-
T Consensus       191 ak~~gtd~~~VwGsG~PlRqFiys~DLA~l~i~vlr~Y  228 (315)
T KOG1431|consen  191 AKRNGTDELTVWGSGSPLRQFIYSDDLADLFIWVLREY  228 (315)
T ss_pred             HHhcCCceEEEecCCChHHHHhhHhHHHHHHHHHHHhh
Confidence            110         11467778888999999999998753

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=98.67  E-value=5e-07  Score=77.94  Aligned_cols=163  Identities=20%  Similarity=0.229  Sum_probs=111.0

Q ss_pred             CCCCCCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhh-HhhhcCCCCeEEEEecCCCHHHHHHHHHHH
Q 021960           22 APPSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSV-LASTLAPAPVTFVHCDVSLEEDIENLINST  100 (305)
Q Consensus        22 ~~~~~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~-~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~  100 (305)
                      ......+.+|-++-|.||||.+|+-++.+|++.|..|++-.|.++-.-. ++-.-.-.++.+...|+.|++||+++++  
T Consensus        52 GtGGRsS~sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvmGdLGQvl~~~fd~~DedSIr~vvk--  129 (391)
T KOG2865|consen   52 GTGGRSSVSGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVMGDLGQVLFMKFDLRDEDSIRAVVK--  129 (391)
T ss_pred             CCCCcccccceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccchhheeecccccceeeeccCCCCHHHHHHHHH--
Confidence            3444567788899999999999999999999999999998776543221 1111123579999999999999999987  


Q ss_pred             HHhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCc
Q 021960          101 VSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPH  180 (305)
Q Consensus       101 ~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~  180 (305)
                           .-++|||..|.-.+-      .+++.      .++|+.++    +.+....++.+--++|.+|+..+.  ....+
T Consensus       130 -----~sNVVINLIGrd~eT------knf~f------~Dvn~~~a----erlAricke~GVerfIhvS~Lgan--v~s~S  186 (391)
T KOG2865|consen  130 -----HSNVVINLIGRDYET------KNFSF------EDVNVHIA----ERLARICKEAGVERFIHVSCLGAN--VKSPS  186 (391)
T ss_pred             -----hCcEEEEeecccccc------CCccc------ccccchHH----HHHHHHHHhhChhheeehhhcccc--ccChH
Confidence                 457899988853321      11222      24566554    555555555666789999998855  34455


Q ss_pred             cchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccc
Q 021960          181 AYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVA  216 (305)
Q Consensus       181 ~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~  216 (305)
                      -|--+|++-+--++.   ++.+    ...|.|.-+.
T Consensus       187 r~LrsK~~gE~aVrd---afPe----AtIirPa~iy  215 (391)
T KOG2865|consen  187 RMLRSKAAGEEAVRD---AFPE----ATIIRPADIY  215 (391)
T ss_pred             HHHHhhhhhHHHHHh---hCCc----ceeechhhhc
Confidence            677788777655543   3322    2446665443

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=98.65  E-value=1.1e-07  Score=88.04  Aligned_cols=80  Identities=28%  Similarity=0.340  Sum_probs=61.9

Q ss_pred             CCCCCCEEEEecC----------------CCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCH
Q 021960           27 RRLEGKVAIITGG----------------ARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLE   90 (305)
Q Consensus        27 ~~l~~k~vlVtGa----------------s~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~   90 (305)
                      .+++||++|||||                ||++|.++|+.|+++|++|+++++... ..     . ..  .+..+|+++.
T Consensus       184 ~~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~-----~-~~--~~~~~dv~~~  254 (399)
T PRK05579        184 KDLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LP-----T-PA--GVKRIDVESA  254 (399)
T ss_pred             cccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-cc-----C-CC--CcEEEccCCH
Confidence            4578999999999                555999999999999999999987652 11     0 11  1346799988


Q ss_pred             HHHHHHHHHHHHhcCCccEEEEcCCCCC
Q 021960           91 EDIENLINSTVSRYGRLDILYNNAGVLG  118 (305)
Q Consensus        91 ~~i~~~~~~~~~~~g~id~li~nag~~~  118 (305)
                      +++.+.++   +.++.+|++|||||...
T Consensus       255 ~~~~~~v~---~~~~~~DilI~~Aav~d  279 (399)
T PRK05579        255 QEMLDAVL---AALPQADIFIMAAAVAD  279 (399)
T ss_pred             HHHHHHHH---HhcCCCCEEEEcccccc
Confidence            88776654   55788999999999753

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=98.63  E-value=7.3e-07  Score=83.03  Aligned_cols=167  Identities=14%  Similarity=0.184  Sum_probs=112.7

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcC--C-eEEEEecCcchh---hhHhhh---------cC-----CCCeEEEEec
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHG--A-KVVIADVEDTLG---SVLAST---------LA-----PAPVTFVHCD   86 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g--~-~vv~~~r~~~~~---~~~~~~---------~~-----~~~v~~~~~D   86 (305)
                      ..++||+++||||||++|+-+.+.|+..-  . ++.++-|.....   +.+...         ..     -.++..+..|
T Consensus         8 ~f~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GD   87 (467)
T KOG1221|consen    8 QFYKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGD   87 (467)
T ss_pred             HHhCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceecccc
Confidence            45689999999999999999999998742  2 466664533222   111111         11     1568888889


Q ss_pred             CCCH------HHHHHHHHHHHHhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC
Q 021960           87 VSLE------EDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRG  160 (305)
Q Consensus        87 ~~d~------~~i~~~~~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~  160 (305)
                      +++.      .+.+.+.       ..+|+|||+|+...-           .|.++..+.+|+.|+.++++.+....   .
T Consensus        88 i~~~~LGis~~D~~~l~-------~eV~ivih~AAtvrF-----------de~l~~al~iNt~Gt~~~l~lak~~~---~  146 (467)
T KOG1221|consen   88 ISEPDLGISESDLRTLA-------DEVNIVIHSAATVRF-----------DEPLDVALGINTRGTRNVLQLAKEMV---K  146 (467)
T ss_pred             ccCcccCCChHHHHHHH-------hcCCEEEEeeeeecc-----------chhhhhhhhhhhHhHHHHHHHHHHhh---h
Confidence            8753      3333333       269999999997532           26678889999999988888775543   2


Q ss_pred             CCEEEEecccccccC----------CC------------------------------CCccchhhHHHHHHHHHHHHHHH
Q 021960          161 GGCIISTASVAGVMG----------GL------------------------------GPHAYTASKHAIVGLTKNAACEL  200 (305)
Q Consensus       161 ~~~iv~isS~~~~~~----------~~------------------------------~~~~Y~~sKaa~~~~~~~la~e~  200 (305)
                      -..++++|...+...          .+                              ....|+-+|+-.++++..-+   
T Consensus       147 l~~~vhVSTAy~n~~~~~i~E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~---  223 (467)
T KOG1221|consen  147 LKALVHVSTAYSNCNVGHIEEKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEA---  223 (467)
T ss_pred             hheEEEeehhheecccccccccccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhc---
Confidence            346888887665410          00                              12478889988888875433   


Q ss_pred             CcCCcEEEEEeCCcccccc
Q 021960          201 GRYGIRVNCISPFGVATSM  219 (305)
Q Consensus       201 ~~~~i~v~~v~PG~v~T~~  219 (305)
                        .+..+..++|..|.+..
T Consensus       224 --~~lPivIiRPsiI~st~  240 (467)
T KOG1221|consen  224 --ENLPLVIIRPSIITSTY  240 (467)
T ss_pred             --cCCCeEEEcCCceeccc
Confidence              46888899999887665

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=98.59  E-value=1.9e-07  Score=93.07  Aligned_cols=162  Identities=19%  Similarity=0.253  Sum_probs=124.3

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHcCCe-EEEEecCcchhhhHhhhc-----CCCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           31 GKVAIITGGARGIGEAAVRLFARHGAK-VVIADVEDTLGSVLASTL-----APAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        31 ~k~vlVtGas~giG~~ia~~l~~~g~~-vv~~~r~~~~~~~~~~~~-----~~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      .|.++|+||-||.|+.++..|..+|++ +++.+|+--+....+...     .+.+|.+-..|++..+..++++++.. +.
T Consensus      1768 eksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~GVqV~vsT~nitt~~ga~~Li~~s~-kl 1846 (2376)
T KOG1202|consen 1768 EKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRRGVQVQVSTSNITTAEGARGLIEESN-KL 1846 (2376)
T ss_pred             cceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhcCeEEEEecccchhhhhHHHHHHHhh-hc
Confidence            578999999999999999999999996 777777754432222111     24456666777777788888877654 44


Q ss_pred             CCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchh
Q 021960          105 GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTA  184 (305)
Q Consensus       105 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~  184 (305)
                      +.+..++|.|.....    .-+++-+.++++..-...+.++.++=+.-....  ..-.-+|.+||.+.-.+..++..|+-
T Consensus      1847 ~~vGGiFnLA~VLRD----~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C--~~LdyFv~FSSvscGRGN~GQtNYG~ 1920 (2376)
T KOG1202|consen 1847 GPVGGIFNLAAVLRD----GLIENQTPKNFKDVAKPKYSGTINLDRVSREIC--PELDYFVVFSSVSCGRGNAGQTNYGL 1920 (2376)
T ss_pred             ccccchhhHHHHHHh----hhhcccChhHHHhhhccceeeeeehhhhhhhhC--cccceEEEEEeecccCCCCcccccch
Confidence            789999999987644    567888999999999999999887665544433  12357899999999899999999999


Q ss_pred             hHHHHHHHHHHHHHH
Q 021960          185 SKHAIVGLTKNAACE  199 (305)
Q Consensus       185 sKaa~~~~~~~la~e  199 (305)
                      ++++++.+++.-+.+
T Consensus      1921 aNS~MERiceqRr~~ 1935 (2376)
T KOG1202|consen 1921 ANSAMERICEQRRHE 1935 (2376)
T ss_pred             hhHHHHHHHHHhhhc
Confidence            999999999874433

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=98.57  E-value=6.2e-06  Score=78.02  Aligned_cols=238  Identities=19%  Similarity=0.106  Sum_probs=139.3

Q ss_pred             CCCCCCCCEEEEecCC-CchHHHHHHHHHHcCCeEEEEecC--cchhhhHhhhc-----CCCCeEEEEecCCCHHHHHHH
Q 021960           25 SHRRLEGKVAIITGGA-RGIGEAAVRLFARHGAKVVIADVE--DTLGSVLASTL-----APAPVTFVHCDVSLEEDIENL   96 (305)
Q Consensus        25 ~~~~l~~k~vlVtGas-~giG~~ia~~l~~~g~~vv~~~r~--~~~~~~~~~~~-----~~~~v~~~~~D~~d~~~i~~~   96 (305)
                      ....+.++++|||||+ +.||.+++..|+..|++||++..+  +++.+.....+     .+..+.++.++.++..+++.+
T Consensus       390 ~~~~y~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdAl  469 (866)
T COG4982         390 NGGTYGDKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDAL  469 (866)
T ss_pred             CCCCcccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHHH
Confidence            3457789999999998 679999999999999999987543  22222222211     355688899999999999999


Q ss_pred             HHHHHHhcC--------------CccEEEEcCCCCCCCCCCCcccCCCH--HHHHHHHHHHhHHHHHHHHHHHHHHHcCC
Q 021960           97 INSTVSRYG--------------RLDILYNNAGVLGNQRKHKSIIDFDA--DEFDNVMRVNVKGMALGIKHAARVMINRG  160 (305)
Q Consensus        97 ~~~~~~~~g--------------~id~li~nag~~~~~~~~~~~~~~~~--~~~~~~~~~n~~~~~~l~~~~~~~~~~~~  160 (305)
                      ++-|-.+..              .++.+|-.|+....    +.+.+.+.  |.-.+++-.|+.   .++-.+.++-.+++
T Consensus       470 IewIg~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v~----G~l~~agsraE~~~rilLw~V~---Rliggl~~~~s~r~  542 (866)
T COG4982         470 IEWIGDEQTETVGPQSIHIKLAWTPTLLFPFAAPRVS----GELADAGSRAEFAMRILLWNVL---RLIGGLKKQGSSRG  542 (866)
T ss_pred             HHHhccccccccCCcceecccccCcceeeecccCCcc----CccccCCchHHHHHHHHHHHHH---HHHHHhhhhccccC
Confidence            998854321              25677777765433    34444432  223333333333   33333333221221


Q ss_pred             ---CCEEEEecccccccC-CCCCccchhhHHHHHHHHHHHHHHHC-cCCcEEEEEeCCccccccchhcccCCCCCchhhh
Q 021960          161 ---GGCIISTASVAGVMG-GLGPHAYTASKHAIVGLTKNAACELG-RYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDE  235 (305)
Q Consensus       161 ---~~~iv~isS~~~~~~-~~~~~~Y~~sKaa~~~~~~~la~e~~-~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~  235 (305)
                         +-.+|.-.|..  .+ +.+-.+|+-+|++++.++..+..|-. ...+.+.--..|++.....   +..         
T Consensus       543 v~~R~hVVLPgSPN--rG~FGgDGaYgEsK~aldav~~RW~sEs~Wa~~vsl~~A~IGWtrGTGL---Mg~---------  608 (866)
T COG4982         543 VDTRLHVVLPGSPN--RGMFGGDGAYGESKLALDAVVNRWHSESSWAARVSLAHALIGWTRGTGL---MGH---------  608 (866)
T ss_pred             cccceEEEecCCCC--CCccCCCcchhhHHHHHHHHHHHhhccchhhHHHHHhhhheeeeccccc---cCC---------
Confidence               23444444432  22 23567999999999999988877742 1124444445577754321   111         


Q ss_pred             hhccCCCcHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHHhccCCCCc---eeccEEEecCCcc
Q 021960          236 CMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRY---VSGHNLVVDGGVT  297 (305)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~~~~---~tG~~i~idgG~~  297 (305)
                              ++.+-...+   +   .--+..+++|+|.-++-||+.+.+.   -+--...+.||..
T Consensus       609 --------Ndiiv~aiE---k---~GV~tyS~~EmA~~LLgL~saev~e~a~~~PI~aDLtGGL~  659 (866)
T COG4982         609 --------NDIIVAAIE---K---AGVRTYSTDEMAFNLLGLASAEVVELAASSPITADLTGGLG  659 (866)
T ss_pred             --------cchhHHHHH---H---hCceecCHHHHHHHHHhhccHHHHHHHhcCCeEeeccCccc
Confidence                    111111111   1   1124558899999999999875332   1223344557754

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=98.55  E-value=7.1e-06  Score=72.04  Aligned_cols=131  Identities=20%  Similarity=0.175  Sum_probs=89.4

Q ss_pred             CEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEEE
Q 021960           32 KVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILY  111 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~li  111 (305)
                      +.+|||||||.+|.+++++|.++|+.|++..|+.+......     ..+.+...|+.+..++...++       .++.++
T Consensus         1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~-----~~v~~~~~d~~~~~~l~~a~~-------G~~~~~   68 (275)
T COG0702           1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA-----GGVEVVLGDLRDPKSLVAGAK-------GVDGVL   68 (275)
T ss_pred             CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc-----CCcEEEEeccCCHhHHHHHhc-------cccEEE
Confidence            36899999999999999999999999999999877665543     458899999999988888775       678888


Q ss_pred             EcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhHHHHHH
Q 021960          112 NNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVG  191 (305)
Q Consensus       112 ~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKaa~~~  191 (305)
                      +..+... ..   .      ..    ............+...     .+...++.+|+..+..  .....|..+|...+.
T Consensus        69 ~i~~~~~-~~---~------~~----~~~~~~~~~~~a~~a~-----~~~~~~~~~s~~~~~~--~~~~~~~~~~~~~e~  127 (275)
T COG0702          69 LISGLLD-GS---D------AF----RAVQVTAVVRAAEAAG-----AGVKHGVSLSVLGADA--ASPSALARAKAAVEA  127 (275)
T ss_pred             EEecccc-cc---c------ch----hHHHHHHHHHHHHHhc-----CCceEEEEeccCCCCC--CCccHHHHHHHHHHH
Confidence            7776542 10   0      00    0111122222222221     2234567777766443  245679999999887


Q ss_pred             HHHH
Q 021960          192 LTKN  195 (305)
Q Consensus       192 ~~~~  195 (305)
                      ..++
T Consensus       128 ~l~~  131 (275)
T COG0702         128 ALRS  131 (275)
T ss_pred             HHHh
Confidence            7654

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=98.50  E-value=1.7e-05  Score=72.86  Aligned_cols=175  Identities=16%  Similarity=0.176  Sum_probs=101.4

Q ss_pred             CCCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhh-hcCCCCeEEEEecCCCHHHHHHHHHHHHHh
Q 021960           25 SHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLAS-TLAPAPVTFVHCDVSLEEDIENLINSTVSR  103 (305)
Q Consensus        25 ~~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~-~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~  103 (305)
                      .....+..+|+|+||+|++|+-+++.|.++|+.|..+-|+......+.. .........+..|.....++...+   .+.
T Consensus        73 ~~~~~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~~~~~d~~~~~v~~~~~~~~d~~~~~---~~~  149 (411)
T KOG1203|consen   73 NNNSKKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLGVFFVDLGLQNVEADVVTAIDILKKL---VEA  149 (411)
T ss_pred             CCCCCCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhcccccccccceeeeccccccchhhhh---hhh
Confidence            3445567899999999999999999999999999998888766555433 111223344555554443333222   222


Q ss_pred             cC-CccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccc
Q 021960          104 YG-RLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAY  182 (305)
Q Consensus       104 ~g-~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y  182 (305)
                      .. ...+++-++|.-++.....+.+           .+...+..++++++..    .+-.+++++||+.+.........+
T Consensus       150 ~~~~~~~v~~~~ggrp~~ed~~~p~-----------~VD~~g~knlvdA~~~----aGvk~~vlv~si~~~~~~~~~~~~  214 (411)
T KOG1203|consen  150 VPKGVVIVIKGAGGRPEEEDIVTPE-----------KVDYEGTKNLVDACKK----AGVKRVVLVGSIGGTKFNQPPNIL  214 (411)
T ss_pred             ccccceeEEecccCCCCcccCCCcc-----------eecHHHHHHHHHHHHH----hCCceEEEEEeecCcccCCCchhh
Confidence            11 2456677776543321001111           2334565666666533    455689999998876543332222


Q ss_pred             hhhHHHHHHHH-HHHHHHHCcCCcEEEEEeCCcccccc
Q 021960          183 TASKHAIVGLT-KNAACELGRYGIRVNCISPFGVATSM  219 (305)
Q Consensus       183 ~~sKaa~~~~~-~~la~e~~~~~i~v~~v~PG~v~T~~  219 (305)
                      ..  .....-. +...+++...|+.-..|.||..+.+.
T Consensus       215 ~~--~~~~~~~k~~~e~~~~~Sgl~ytiIR~g~~~~~~  250 (411)
T KOG1203|consen  215 LL--NGLVLKAKLKAEKFLQDSGLPYTIIRPGGLEQDT  250 (411)
T ss_pred             hh--hhhhhHHHHhHHHHHHhcCCCcEEEeccccccCC
Confidence            21  1111111 22334445678888899999887654

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=98.39  E-value=1.4e-06  Score=77.72  Aligned_cols=81  Identities=25%  Similarity=0.274  Sum_probs=59.1

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCe-EEEEecCc---chhhhHhhhcC--CCCeEEEEecCCCHHHHHHHHHHHH
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAK-VVIADVED---TLGSVLASTLA--PAPVTFVHCDVSLEEDIENLINSTV  101 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~-vv~~~r~~---~~~~~~~~~~~--~~~v~~~~~D~~d~~~i~~~~~~~~  101 (305)
                      .+++|+++|+|| ||+|++++..|++.|++ |++++|+.   .+.+.+.+.+.  ...+.+..+|+++.++++..++   
T Consensus       123 ~~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~---  198 (289)
T PRK12548        123 DVKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIA---  198 (289)
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhc---
Confidence            467899999999 69999999999999996 99999985   34444433331  1234556788887777665443   


Q ss_pred             HhcCCccEEEEcCCC
Q 021960          102 SRYGRLDILYNNAGV  116 (305)
Q Consensus       102 ~~~g~id~li~nag~  116 (305)
                          ..|+||||-..
T Consensus       199 ----~~DilINaTp~  209 (289)
T PRK12548        199 ----SSDILVNATLV  209 (289)
T ss_pred             ----cCCEEEEeCCC
Confidence                46999997643

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.37  E-value=3e-06  Score=72.89  Aligned_cols=98  Identities=15%  Similarity=0.219  Sum_probs=64.6

Q ss_pred             EEEEecCCCc-hHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEEE
Q 021960           33 VAIITGGARG-IGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILY  111 (305)
Q Consensus        33 ~vlVtGas~g-iG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~li  111 (305)
                      +-.||+.|+| +|+++|+.|+++|++|++++|......     .....+.++.++.     .+.+.+.+.+.++.+|+||
T Consensus        17 VR~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~~-----~~~~~v~~i~v~s-----~~~m~~~l~~~~~~~DivI   86 (229)
T PRK06732         17 VRGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVKP-----EPHPNLSIIEIEN-----VDDLLETLEPLVKDHDVLI   86 (229)
T ss_pred             ceeecCccchHHHHHHHHHHHhCCCEEEEEECcccccC-----CCCCCeEEEEEec-----HHHHHHHHHHHhcCCCEEE
Confidence            5578866655 999999999999999999886532110     0112355555432     2333334444446799999


Q ss_pred             EcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHH
Q 021960          112 NNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKG  144 (305)
Q Consensus       112 ~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~  144 (305)
                      ||||....    .+....+.+++.+++++|...
T Consensus        87 h~AAvsd~----~~~~~~~~~~~~~~~~v~~~~  115 (229)
T PRK06732         87 HSMAVSDY----TPVYMTDLEEVSASDNLNEFL  115 (229)
T ss_pred             eCCccCCc----eehhhhhhhhhhhhhhhhhhh
Confidence            99998642    344556778888888887655

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.36  E-value=2.8e-06  Score=71.19  Aligned_cols=81  Identities=25%  Similarity=0.350  Sum_probs=62.0

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcC-CCCeEEEEecCCCHHHHHHHHHHHHHhcCC
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLA-PAPVTFVHCDVSLEEDIENLINSTVSRYGR  106 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~-~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~  106 (305)
                      ++++++++|+||+|++|+.+++.|+++|++|++++|+..+.+.+.+.+. ........+|..+.+++.+.++       .
T Consensus        25 ~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~-------~   97 (194)
T cd01078          25 DLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIK-------G   97 (194)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHh-------c
Confidence            6788999999999999999999999999999999998766555544332 1124456678888888777664       4


Q ss_pred             ccEEEEcCC
Q 021960          107 LDILYNNAG  115 (305)
Q Consensus       107 id~li~nag  115 (305)
                      .|+||++..
T Consensus        98 ~diVi~at~  106 (194)
T cd01078          98 ADVVFAAGA  106 (194)
T ss_pred             CCEEEECCC
Confidence            788887544

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=98.31  E-value=2.4e-06  Score=78.98  Aligned_cols=80  Identities=31%  Similarity=0.383  Sum_probs=60.5

Q ss_pred             CCCCCEEEEecC---------------CCc-hHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHH
Q 021960           28 RLEGKVAIITGG---------------ARG-IGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEE   91 (305)
Q Consensus        28 ~l~~k~vlVtGa---------------s~g-iG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~   91 (305)
                      +++||++|||||               |+| +|.++|+.|..+|++|+++.+.....      . ...+  ..+|+++.+
T Consensus       182 ~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~------~-~~~~--~~~~v~~~~  252 (390)
T TIGR00521       182 DLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL------T-PPGV--KSIKVSTAE  252 (390)
T ss_pred             ccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC------C-CCCc--EEEEeccHH
Confidence            578999999999               666 99999999999999999887654321      1 1112  557999988


Q ss_pred             HH-HHHHHHHHHhcCCccEEEEcCCCCCC
Q 021960           92 DI-ENLINSTVSRYGRLDILYNNAGVLGN  119 (305)
Q Consensus        92 ~i-~~~~~~~~~~~g~id~li~nag~~~~  119 (305)
                      ++ +.++++.   ++.+|++|+|||....
T Consensus       253 ~~~~~~~~~~---~~~~D~~i~~Aavsd~  278 (390)
T TIGR00521       253 EMLEAALNEL---AKDFDIFISAAAVADF  278 (390)
T ss_pred             HHHHHHHHhh---cccCCEEEEccccccc
Confidence            88 5555443   4679999999998643

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=98.24  E-value=6.4e-05  Score=61.11  Aligned_cols=151  Identities=13%  Similarity=0.100  Sum_probs=102.2

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEEEE
Q 021960           33 VAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILYN  112 (305)
Q Consensus        33 ~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~li~  112 (305)
                      ++.|.||||-.|..++++..++|+.|..+.|+..+....      ..+..++.|+.|.+++.+.+.       ..|+||.
T Consensus         2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~------~~~~i~q~Difd~~~~a~~l~-------g~DaVIs   68 (211)
T COG2910           2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR------QGVTILQKDIFDLTSLASDLA-------GHDAVIS   68 (211)
T ss_pred             eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc------ccceeecccccChhhhHhhhc-------CCceEEE
Confidence            578999999999999999999999999999987655432      236789999999988876654       6899998


Q ss_pred             cCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCC--------C-CCccch
Q 021960          113 NAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGG--------L-GPHAYT  183 (305)
Q Consensus       113 nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~--------~-~~~~Y~  183 (305)
                      .-|.....         ..+..       ...    .+++...++..+..|+++++...+..--        | +...|-
T Consensus        69 A~~~~~~~---------~~~~~-------~k~----~~~li~~l~~agv~RllVVGGAGSL~id~g~rLvD~p~fP~ey~  128 (211)
T COG2910          69 AFGAGASD---------NDELH-------SKS----IEALIEALKGAGVPRLLVVGGAGSLEIDEGTRLVDTPDFPAEYK  128 (211)
T ss_pred             eccCCCCC---------hhHHH-------HHH----HHHHHHHHhhcCCeeEEEEcCccceEEcCCceeecCCCCchhHH
Confidence            87764221         11111       111    3445555555677899999887776421        2 222444


Q ss_pred             hhHHHHHHHHHHHHHHHCcCCcEEEEEeCCcccccc
Q 021960          184 ASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSM  219 (305)
Q Consensus       184 ~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~  219 (305)
                      ..-.+.--+.+.|..+   .++.-.-|+|-....|.
T Consensus       129 ~~A~~~ae~L~~Lr~~---~~l~WTfvSPaa~f~PG  161 (211)
T COG2910         129 PEALAQAEFLDSLRAE---KSLDWTFVSPAAFFEPG  161 (211)
T ss_pred             HHHHHHHHHHHHHhhc---cCcceEEeCcHHhcCCc
Confidence            3333334455566666   34777888888776663

>PLN00106 malate dehydrogenase

Probab=98.16  E-value=2.4e-05  Score=70.57  Aligned_cols=162  Identities=14%  Similarity=0.078  Sum_probs=97.5

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHcCC--eEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 021960           31 GKVAIITGGARGIGEAAVRLFARHGA--KVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLD  108 (305)
Q Consensus        31 ~k~vlVtGas~giG~~ia~~l~~~g~--~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id  108 (305)
                      .++|.|||++|.+|.+++..|+.++.  .++++++++...... +.. .........++++.+++.+.+       ...|
T Consensus        18 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~g~a~-Dl~-~~~~~~~i~~~~~~~d~~~~l-------~~aD   88 (323)
T PLN00106         18 GFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANTPGVAA-DVS-HINTPAQVRGFLGDDQLGDAL-------KGAD   88 (323)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCCCeeEc-hhh-hCCcCceEEEEeCCCCHHHHc-------CCCC
Confidence            46899999999999999999997765  699999876222111 110 100111223433333333333       3699


Q ss_pred             EEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEeccccc-----c--------cC
Q 021960          109 ILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAG-----V--------MG  175 (305)
Q Consensus       109 ~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~-----~--------~~  175 (305)
                      +||+.||....       ..   ..+...+..|......+.+.    +.+.....+++++|=..     .        .+
T Consensus        89 iVVitAG~~~~-------~g---~~R~dll~~N~~i~~~i~~~----i~~~~p~aivivvSNPvD~~~~i~t~~~~~~s~  154 (323)
T PLN00106         89 LVIIPAGVPRK-------PG---MTRDDLFNINAGIVKTLCEA----VAKHCPNALVNIISNPVNSTVPIAAEVLKKAGV  154 (323)
T ss_pred             EEEEeCCCCCC-------CC---CCHHHHHHHHHHHHHHHHHH----HHHHCCCeEEEEeCCCccccHHHHHHHHHHcCC
Confidence            99999997422       11   23556677888775444444    44455555555555332     1        23


Q ss_pred             CCCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCcc
Q 021960          176 GLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGV  215 (305)
Q Consensus       176 ~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v  215 (305)
                      .+....||.++.-...|-..+|.++.-.-..|....-|--
T Consensus       155 ~p~~~viG~~~LDs~Rl~~~lA~~lgv~~~~V~~~ViGeH  194 (323)
T PLN00106        155 YDPKKLFGVTTLDVVRANTFVAEKKGLDPADVDVPVVGGH  194 (323)
T ss_pred             CCcceEEEEecchHHHHHHHHHHHhCCChhheEEEEEEeC
Confidence            4556789998877777888888887643344455555544

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.10  E-value=1.5e-05  Score=73.13  Aligned_cols=77  Identities=22%  Similarity=0.366  Sum_probs=64.6

Q ss_pred             CEEEEecCCCchHHHHHHHHHHcC-CeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEE
Q 021960           32 KVAIITGGARGIGEAAVRLFARHG-AKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDIL  110 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~g-~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~l  110 (305)
                      +.+||.|+ |+||+.+|..|+++| .+|.+.+|+....+.+..... .++..+.+|+.|.+++.++++       ..|+|
T Consensus         2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~-~~v~~~~vD~~d~~al~~li~-------~~d~V   72 (389)
T COG1748           2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIG-GKVEALQVDAADVDALVALIK-------DFDLV   72 (389)
T ss_pred             CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhcc-ccceeEEecccChHHHHHHHh-------cCCEE
Confidence            57899998 999999999999999 799999999777666654432 379999999999999988886       34999


Q ss_pred             EEcCCCC
Q 021960          111 YNNAGVL  117 (305)
Q Consensus       111 i~nag~~  117 (305)
                      |+++...
T Consensus        73 In~~p~~   79 (389)
T COG1748          73 INAAPPF   79 (389)
T ss_pred             EEeCCch
Confidence            9988754

>PRK09620 hypothetical protein; Provisional

Probab=98.10  E-value=8.9e-06  Score=69.85  Aligned_cols=83  Identities=17%  Similarity=0.176  Sum_probs=50.6

Q ss_pred             CCCCEEEEecCC----------------CchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHH
Q 021960           29 LEGKVAIITGGA----------------RGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEED   92 (305)
Q Consensus        29 l~~k~vlVtGas----------------~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~   92 (305)
                      |+||.||||+|.                |.+|.++|+.|.++|+.|++++........  ....+..+..+..    ..+
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~--~~~~~~~~~~V~s----~~d   74 (229)
T PRK09620          1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPN--DINNQLELHPFEG----IID   74 (229)
T ss_pred             CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCc--ccCCceeEEEEec----HHH
Confidence            478999999886                999999999999999999988753221100  0001111222333    222


Q ss_pred             HHHHHHHHHHhcCCccEEEEcCCCCC
Q 021960           93 IENLINSTVSRYGRLDILYNNAGVLG  118 (305)
Q Consensus        93 i~~~~~~~~~~~g~id~li~nag~~~  118 (305)
                      +...+.++.+. .++|+|||+|+...
T Consensus        75 ~~~~l~~~~~~-~~~D~VIH~AAvsD   99 (229)
T PRK09620         75 LQDKMKSIITH-EKVDAVIMAAAGSD   99 (229)
T ss_pred             HHHHHHHHhcc-cCCCEEEECccccc
Confidence            22233333222 25899999999753

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=98.06  E-value=2.8e-05  Score=62.74  Aligned_cols=157  Identities=11%  Similarity=0.060  Sum_probs=101.2

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCC--eEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcC
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGA--KVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYG  105 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~--~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g  105 (305)
                      .|+++.++|.||||-.|..+.+++++.+-  +|+++.|++.....     ...++.....|++..++...-+       .
T Consensus        15 ~mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~a-----t~k~v~q~~vDf~Kl~~~a~~~-------q   82 (238)
T KOG4039|consen   15 RMQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPA-----TDKVVAQVEVDFSKLSQLATNE-------Q   82 (238)
T ss_pred             hhhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCcc-----ccceeeeEEechHHHHHHHhhh-------c
Confidence            56889999999999999999999999873  68877777533222     1334667778877665554433       3


Q ss_pred             CccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhh
Q 021960          106 RLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTAS  185 (305)
Q Consensus       106 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  185 (305)
                      .+|+++++-|......-.+.+-..+           -.-.+.+.+.    -++++...|+.+||..+...+  ...|--.
T Consensus        83 g~dV~FcaLgTTRgkaGadgfykvD-----------hDyvl~~A~~----AKe~Gck~fvLvSS~GAd~sS--rFlY~k~  145 (238)
T KOG4039|consen   83 GPDVLFCALGTTRGKAGADGFYKVD-----------HDYVLQLAQA----AKEKGCKTFVLVSSAGADPSS--RFLYMKM  145 (238)
T ss_pred             CCceEEEeecccccccccCceEeec-----------hHHHHHHHHH----HHhCCCeEEEEEeccCCCccc--ceeeeec
Confidence            6999999998764422111111112           1111222232    334677799999998877554  4568888


Q ss_pred             HHHHHHHHHHHHHHHCcCCcEEEEEeCCcccccc
Q 021960          186 KHAIVGLTKNAACELGRYGIRVNCISPFGVATSM  219 (305)
Q Consensus       186 Kaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~  219 (305)
                      |.-++.=+..|.-      =++..+.||++..+.
T Consensus       146 KGEvE~~v~eL~F------~~~~i~RPG~ll~~R  173 (238)
T KOG4039|consen  146 KGEVERDVIELDF------KHIIILRPGPLLGER  173 (238)
T ss_pred             cchhhhhhhhccc------cEEEEecCcceeccc
Confidence            8777655433221      256789999987654

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=98.01  E-value=2.4e-05  Score=72.73  Aligned_cols=76  Identities=32%  Similarity=0.448  Sum_probs=59.5

Q ss_pred             EEEecCCCchHHHHHHHHHHcC-C-eEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEEE
Q 021960           34 AIITGGARGIGEAAVRLFARHG-A-KVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILY  111 (305)
Q Consensus        34 vlVtGas~giG~~ia~~l~~~g-~-~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~li  111 (305)
                      |+|.|+ |.+|+.+++.|++++ . +|++.+|+..+.+.+.+.....++.++.+|+.|.+++.++++       .-|+||
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~-------~~dvVi   72 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAELLR-------GCDVVI   72 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHHHHT-------TSSEEE
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHHHHh-------cCCEEE
Confidence            689999 999999999999886 4 799999998887777665556789999999999999888876       469999


Q ss_pred             EcCCCC
Q 021960          112 NNAGVL  117 (305)
Q Consensus       112 ~nag~~  117 (305)
                      |++|..
T Consensus        73 n~~gp~   78 (386)
T PF03435_consen   73 NCAGPF   78 (386)
T ss_dssp             E-SSGG
T ss_pred             ECCccc
Confidence            999864

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PTZ00325 malate dehydrogenase; Provisional

Probab=97.95  E-value=8.7e-05  Score=66.93  Aligned_cols=148  Identities=15%  Similarity=0.090  Sum_probs=87.0

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcC--CeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcC
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHG--AKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYG  105 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g--~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g  105 (305)
                      .++.+++.|+|++|.||..++..|+.++  ..++++++.....+...-.....  .....+++|..+..+.+       .
T Consensus         5 ~~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~~g~a~Dl~~~~~--~~~v~~~td~~~~~~~l-------~   75 (321)
T PTZ00325          5 ALKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVGAPGVAADLSHIDT--PAKVTGYADGELWEKAL-------R   75 (321)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCCCcccccchhhcCc--CceEEEecCCCchHHHh-------C
Confidence            3456799999999999999999999655  47999998322221111000111  22334555543333332       2


Q ss_pred             CccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEeccccc-------------
Q 021960          106 RLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAG-------------  172 (305)
Q Consensus       106 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~-------------  172 (305)
                      ..|+||+++|....          ..+++...+..|+...    +.+.+.|.+.+..++|+++|-..             
T Consensus        76 gaDvVVitaG~~~~----------~~~tR~dll~~N~~i~----~~i~~~i~~~~~~~iviv~SNPvdv~~~~~~~~~~~  141 (321)
T PTZ00325         76 GADLVLICAGVPRK----------PGMTRDDLFNTNAPIV----RDLVAAVASSAPKAIVGIVSNPVNSTVPIAAETLKK  141 (321)
T ss_pred             CCCEEEECCCCCCC----------CCCCHHHHHHHHHHHH----HHHHHHHHHHCCCeEEEEecCcHHHHHHHHHhhhhh
Confidence            68999999997421          1123455677888765    45555555566667887777321             


Q ss_pred             ccCCCCCccchhhHHHHH--HHHHHHHHHH
Q 021960          173 VMGGLGPHAYTASKHAIV--GLTKNAACEL  200 (305)
Q Consensus       173 ~~~~~~~~~Y~~sKaa~~--~~~~~la~e~  200 (305)
                      ..+.|....||.+-  |+  .|-..+++.+
T Consensus       142 ~sg~p~~~viG~g~--LDs~R~r~~la~~l  169 (321)
T PTZ00325        142 AGVYDPRKLFGVTT--LDVVRARKFVAEAL  169 (321)
T ss_pred             ccCCChhheeechh--HHHHHHHHHHHHHh
Confidence            12345556778762  44  3444555554

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=97.90  E-value=7e-05  Score=58.96  Aligned_cols=76  Identities=22%  Similarity=0.315  Sum_probs=57.9

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCe-EEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCC
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAK-VVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGR  106 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~-vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~  106 (305)
                      +++++.++|.|+ ||.|++++..|++.|++ |.++.|+..+.+.+.+...+..+.++  ++.+..   +.+       ..
T Consensus         9 ~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~--~~~~~~---~~~-------~~   75 (135)
T PF01488_consen    9 DLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAI--PLEDLE---EAL-------QE   75 (135)
T ss_dssp             TGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEE--EGGGHC---HHH-------HT
T ss_pred             CcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCcccccee--eHHHHH---HHH-------hh
Confidence            678999999997 89999999999999997 99999998888877777644445554  333332   222       26


Q ss_pred             ccEEEEcCCC
Q 021960          107 LDILYNNAGV  116 (305)
Q Consensus       107 id~li~nag~  116 (305)
                      .|+||++.+.
T Consensus        76 ~DivI~aT~~   85 (135)
T PF01488_consen   76 ADIVINATPS   85 (135)
T ss_dssp             ESEEEE-SST
T ss_pred             CCeEEEecCC
Confidence            8999998764

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.83  E-value=5.9e-05  Score=71.55  Aligned_cols=77  Identities=21%  Similarity=0.299  Sum_probs=55.5

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcch-hhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCC
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTL-GSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGR  106 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~-~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~  106 (305)
                      ++++|+++|+|+++ +|.++|+.|+++|+.|++++++... .+...+.+....+.++..|..+            +..+.
T Consensus         2 ~~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~~~~~~~~~~~~------------~~~~~   68 (450)
T PRK14106          2 ELKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGELGIELVLGEYPE------------EFLEG   68 (450)
T ss_pred             CcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCEEEeCCcch------------hHhhc
Confidence            46789999999877 9999999999999999999887422 2221122222235677777775            11246


Q ss_pred             ccEEEEcCCCC
Q 021960          107 LDILYNNAGVL  117 (305)
Q Consensus       107 id~li~nag~~  117 (305)
                      +|+||+++|..
T Consensus        69 ~d~vv~~~g~~   79 (450)
T PRK14106         69 VDLVVVSPGVP   79 (450)
T ss_pred             CCEEEECCCCC
Confidence            89999999864

>PRK14982 acyl-ACP reductase; Provisional

Probab=97.79  E-value=9.2e-05  Score=67.06  Aligned_cols=73  Identities=19%  Similarity=0.262  Sum_probs=52.7

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHc-C-CeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcC
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARH-G-AKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYG  105 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~-g-~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g  105 (305)
                      ++++|+++||||+|.||+.+|++|+++ | .+++++.|+..+...+..++.       ..|+.   ++++       ...
T Consensus       152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~-------~~~i~---~l~~-------~l~  214 (340)
T PRK14982        152 DLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELG-------GGKIL---SLEE-------ALP  214 (340)
T ss_pred             CcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhc-------cccHH---hHHH-------HHc
Confidence            678999999999999999999999864 5 478899998776665544321       12222   2222       224


Q ss_pred             CccEEEEcCCCC
Q 021960          106 RLDILYNNAGVL  117 (305)
Q Consensus       106 ~id~li~nag~~  117 (305)
                      ..|+|||.++..
T Consensus       215 ~aDiVv~~ts~~  226 (340)
T PRK14982        215 EADIVVWVASMP  226 (340)
T ss_pred             cCCEEEECCcCC
Confidence            689999999864

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=97.76  E-value=0.00014  Score=61.86  Aligned_cols=168  Identities=18%  Similarity=0.096  Sum_probs=102.4

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhh--Hhhhc------CCCCeEEEEecCCCHHHHHHHHHHHH
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSV--LASTL------APAPVTFVHCDVSLEEDIENLINSTV  101 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~--~~~~~------~~~~v~~~~~D~~d~~~i~~~~~~~~  101 (305)
                      ..|++||||-+|-=|+-+++.|+.+|+.|..+-|+....+.  ++-..      .+......-.|++|..++.++++.+ 
T Consensus        27 ~rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~i-  105 (376)
T KOG1372|consen   27 PRKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTI-  105 (376)
T ss_pred             cceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhcc-
Confidence            45799999999999999999999999999876554332221  11111      2445677889999999999999887 


Q ss_pred             HhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccC------
Q 021960          102 SRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMG------  175 (305)
Q Consensus       102 ~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~------  175 (305)
                          +++-+.|.|+.....        .+.+-.+..-++...|++.++.++-..-..+ +-++--. |.+-..+      
T Consensus       106 ----kPtEiYnLaAQSHVk--------vSFdlpeYTAeVdavGtLRlLdAi~~c~l~~-~VrfYQA-stSElyGkv~e~P  171 (376)
T KOG1372|consen  106 ----KPTEVYNLAAQSHVK--------VSFDLPEYTAEVDAVGTLRLLDAIRACRLTE-KVRFYQA-STSELYGKVQEIP  171 (376)
T ss_pred             ----CchhhhhhhhhcceE--------EEeecccceeeccchhhhhHHHHHHhcCccc-ceeEEec-ccHhhcccccCCC
Confidence                677788888765432        1222223334566778777777664432222 2333332 3222222      


Q ss_pred             ------CCCCccchhhHHHHHHHHHHHHHH---HCcCCcEEEEEeC
Q 021960          176 ------GLGPHAYTASKHAIVGLTKNAACE---LGRYGIRVNCISP  212 (305)
Q Consensus       176 ------~~~~~~Y~~sKaa~~~~~~~la~e---~~~~~i~v~~v~P  212 (305)
                            .-..++|+++|-+-.=++-.++..   ++-.||-+|-=+|
T Consensus       172 QsE~TPFyPRSPYa~aKmy~~WivvNyREAYnmfAcNGILFNHESP  217 (376)
T KOG1372|consen  172 QSETTPFYPRSPYAAAKMYGYWIVVNYREAYNMFACNGILFNHESP  217 (376)
T ss_pred             cccCCCCCCCChhHHhhhhheEEEEEhHHhhcceeeccEeecCCCC
Confidence                  224578999997643333222222   2344566554444

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=97.72  E-value=0.00019  Score=64.98  Aligned_cols=114  Identities=13%  Similarity=0.167  Sum_probs=65.6

Q ss_pred             EEEEecCCCchHHHHHHHHHHcC-------CeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHH-----HHHHHHHHH
Q 021960           33 VAIITGGARGIGEAAVRLFARHG-------AKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEE-----DIENLINST  100 (305)
Q Consensus        33 ~vlVtGas~giG~~ia~~l~~~g-------~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~-----~i~~~~~~~  100 (305)
                      +++||||+|.+|.+++..|+..+       ..|+++++++... .+.         ....|+.|..     .+. .....
T Consensus         4 kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~-~~~---------g~~~Dl~d~~~~~~~~~~-~~~~~   72 (325)
T cd01336           4 RVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALK-ALE---------GVVMELQDCAFPLLKSVV-ATTDP   72 (325)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccc-ccc---------ceeeehhhccccccCCce-ecCCH
Confidence            68999999999999999999854       5799999865321 110         1222333210     000 00112


Q ss_pred             HHhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC--CCCEEEEecccc
Q 021960          101 VSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINR--GGGCIISTASVA  171 (305)
Q Consensus       101 ~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~~~iv~isS~~  171 (305)
                      .+.+...|+|||+||....       ...+.   .+.++.|+.-    ++.+.+.+.+.  ..+.++++|...
T Consensus        73 ~~~l~~aDiVI~tAG~~~~-------~~~~R---~~l~~~N~~i----~~~i~~~i~~~~~~~~iiivvsNPv  131 (325)
T cd01336          73 EEAFKDVDVAILVGAMPRK-------EGMER---KDLLKANVKI----FKEQGEALDKYAKKNVKVLVVGNPA  131 (325)
T ss_pred             HHHhCCCCEEEEeCCcCCC-------CCCCH---HHHHHHHHHH----HHHHHHHHHHhCCCCeEEEEecCcH
Confidence            2233479999999997532       11233   4455666644    45555555544  356777777533

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=97.70  E-value=0.00065  Score=60.62  Aligned_cols=138  Identities=20%  Similarity=0.266  Sum_probs=83.5

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDI  109 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~  109 (305)
                      .|++++|+|+++++|.++++.+...|++|+++.+++...+.+.+ . +..   ..+|..+.+..+.+.+.. .. ..+|.
T Consensus       144 ~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~-g~~---~~~~~~~~~~~~~~~~~~-~~-~~~d~  216 (325)
T cd08253         144 AGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELVRQ-A-GAD---AVFNYRAEDLADRILAAT-AG-QGVDV  216 (325)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-c-CCC---EEEeCCCcCHHHHHHHHc-CC-CceEE
Confidence            57899999999999999999999999999999887766555532 2 211   124555544444433222 11 35999


Q ss_pred             EEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccc------------cCCC
Q 021960          110 LYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGV------------MGGL  177 (305)
Q Consensus       110 li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~------------~~~~  177 (305)
                      +++++|..               ..+               .....+  ...|+++.+++....            ....
T Consensus       217 vi~~~~~~---------------~~~---------------~~~~~l--~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~  264 (325)
T cd08253         217 IIEVLANV---------------NLA---------------KDLDVL--APGGRIVVYGSGGLRGTIPINPLMAKEASIR  264 (325)
T ss_pred             EEECCchH---------------HHH---------------HHHHhh--CCCCEEEEEeecCCcCCCChhHHHhcCceEE
Confidence            99988631               000               001122  345788887763210            0011


Q ss_pred             CCccchhhHHHHHHHHHHHHHHHCcCCcE
Q 021960          178 GPHAYTASKHAIVGLTKNAACELGRYGIR  206 (305)
Q Consensus       178 ~~~~Y~~sKaa~~~~~~~la~e~~~~~i~  206 (305)
                      +...|...|..+..+.+.+...+....++
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  293 (325)
T cd08253         265 GVLLYTATPEERAAAAEAIAAGLADGALR  293 (325)
T ss_pred             eeehhhcCHHHHHHHHHHHHHHHHCCCcc
Confidence            22356677777777777777666554443

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=97.61  E-value=0.00016  Score=61.01  Aligned_cols=158  Identities=16%  Similarity=0.228  Sum_probs=101.5

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHc-CC-eEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 021960           31 GKVAIITGGARGIGEAAVRLFARH-GA-KVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLD  108 (305)
Q Consensus        31 ~k~vlVtGas~giG~~ia~~l~~~-g~-~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id  108 (305)
                      .-.+||||+-|-+|..+|+.|..+ |- +|++.+........+.   .   --++..|+-|.+++++++-.     .+||
T Consensus        44 ~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~~V~~---~---GPyIy~DILD~K~L~eIVVn-----~RId  112 (366)
T KOG2774|consen   44 APRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPPANVTD---V---GPYIYLDILDQKSLEEIVVN-----KRID  112 (366)
T ss_pred             CCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCchhhcc---c---CCchhhhhhccccHHHhhcc-----cccc
Confidence            457899999999999999999754 65 4665555444333221   1   23567899998888876532     3799


Q ss_pred             EEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCC------------
Q 021960          109 ILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGG------------  176 (305)
Q Consensus       109 ~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~------------  176 (305)
                      -+||-.+.....         .+...--..++|+.|..++++....+     +-++.+-|.+.++-|.            
T Consensus       113 WL~HfSALLSAv---------GE~NVpLA~~VNI~GvHNil~vAa~~-----kL~iFVPSTIGAFGPtSPRNPTPdltIQ  178 (366)
T KOG2774|consen  113 WLVHFSALLSAV---------GETNVPLALQVNIRGVHNILQVAAKH-----KLKVFVPSTIGAFGPTSPRNPTPDLTIQ  178 (366)
T ss_pred             eeeeHHHHHHHh---------cccCCceeeeecchhhhHHHHHHHHc-----CeeEeecccccccCCCCCCCCCCCeeee
Confidence            999976543211         11222234678999988877776543     2345555666555432            


Q ss_pred             CCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEE-eCCccc
Q 021960          177 LGPHAYTASKHAIVGLTKNAACELGRYGIRVNCI-SPFGVA  216 (305)
Q Consensus       177 ~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v-~PG~v~  216 (305)
                      .....||.||.-.+-+-+.+...+   |+.+-++ .||.+.
T Consensus       179 RPRTIYGVSKVHAEL~GEy~~hrF---g~dfr~~rfPg~is  216 (366)
T KOG2774|consen  179 RPRTIYGVSKVHAELLGEYFNHRF---GVDFRSMRFPGIIS  216 (366)
T ss_pred             cCceeechhHHHHHHHHHHHHhhc---CccceecccCcccc
Confidence            134689999999888888776664   5554443 455553

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=97.60  E-value=0.0014  Score=73.44  Aligned_cols=179  Identities=13%  Similarity=0.103  Sum_probs=116.1

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRL  107 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~i  107 (305)
                      .+.++.++|++..++++.+++..|.++|+.|+++...+.-.... .. .+..+..+.+.-.|..+++.+++.+....+.+
T Consensus      1752 ~~~~~~~~v~~d~~~~~~~L~~~L~~~G~~v~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1829 (2582)
T TIGR02813      1752 KQSGANALVIDDDGHNAGVLAEKLIAAGWQVAVVRSPWVVSHSA-SP-LASAIASVTLGTIDDTSIEAVIKDIEEKTAQI 1829 (2582)
T ss_pred             cccCceeEEEcCCcchHHHHHHHHHhCCCeEEEeeccccccccc-cc-cccccccccccccchHHHHHHHHhhhcccccc
Confidence            44577888888889999999999999999998874221100000 00 11223344556667788888888887777889


Q ss_pred             cEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccc-----
Q 021960          108 DILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAY-----  182 (305)
Q Consensus       108 d~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y-----  182 (305)
                      +.+||.........  ......   .+...-...+...|.+.|.+.+.+...+++.++.++...+-.+..+....     
T Consensus      1830 ~g~i~l~~~~~~~~--~~~~~~---~~~~~~~~~l~~~f~~ak~~~~~l~~~~~~~~~~vsr~~G~~g~~~~~~~~~~~~ 1904 (2582)
T TIGR02813      1830 DGFIHLQPQHKSVA--DKVDAI---ELPEAAKQSLMLAFLFAKLLNVKLATNARASFVTVSRIDGGFGYSNGDADSGTQQ 1904 (2582)
T ss_pred             ceEEEecccccccc--cccccc---ccchhhHHHHHHHHHHHHhhchhhccCCCeEEEEEEecCCccccCCccccccccc
Confidence            99999777532100  111111   11111223445567777777666655566789999998877765332221     


Q ss_pred             ---hhhHHHHHHHHHHHHHHHCcCCcEEEEEeCC
Q 021960          183 ---TASKHAIVGLTKNAACELGRYGIRVNCISPF  213 (305)
Q Consensus       183 ---~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG  213 (305)
                         ....+++.+|+|+++.|+..-.++...+.|.
T Consensus      1905 ~~~~~~~a~l~Gl~Ktl~~E~P~~~~r~vDl~~~ 1938 (2582)
T TIGR02813      1905 VKAELNQAALAGLTKTLNHEWNAVFCRALDLAPK 1938 (2582)
T ss_pred             cccchhhhhHHHHHHhHHHHCCCCeEEEEeCCCC
Confidence               2358999999999999997666777777775

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>cd00704 MDH Malate dehydrogenase

Probab=97.50  E-value=0.0015  Score=59.23  Aligned_cols=113  Identities=13%  Similarity=0.122  Sum_probs=68.4

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCC-------eEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHH--H--HHHHHHH
Q 021960           33 VAIITGGARGIGEAAVRLFARHGA-------KVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDI--E--NLINSTV  101 (305)
Q Consensus        33 ~vlVtGas~giG~~ia~~l~~~g~-------~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i--~--~~~~~~~  101 (305)
                      ++.||||+|.+|..++..|+..|.       .++++++++.. +         .......|+.|....  .  .+-....
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~-~---------~~~g~~~Dl~d~~~~~~~~~~i~~~~~   71 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAM-K---------ALEGVVMELQDCAFPLLKGVVITTDPE   71 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCcc-C---------ccceeeeehhhhcccccCCcEEecChH
Confidence            579999999999999999998653       48888887531 1         133455666654200  0  0111223


Q ss_pred             HhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC--CCCEEEEecc
Q 021960          102 SRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINR--GGGCIISTAS  169 (305)
Q Consensus       102 ~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~~~iv~isS  169 (305)
                      +.....|+||+.||....       ...+.   .+.+..|..    +++.+.+.+.+.  +.+.++++|-
T Consensus        72 ~~~~~aDiVVitAG~~~~-------~g~tR---~dll~~N~~----i~~~i~~~i~~~~~~~~iiivvsN  127 (323)
T cd00704          72 EAFKDVDVAILVGAFPRK-------PGMER---ADLLRKNAK----IFKEQGEALNKVAKPTVKVLVVGN  127 (323)
T ss_pred             HHhCCCCEEEEeCCCCCC-------cCCcH---HHHHHHhHH----HHHHHHHHHHHhCCCCeEEEEeCC
Confidence            444579999999997422       11233   334555554    456666666555  3566777664

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=97.46  E-value=0.002  Score=58.53  Aligned_cols=77  Identities=23%  Similarity=0.358  Sum_probs=51.6

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcC--Ccc
Q 021960           31 GKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYG--RLD  108 (305)
Q Consensus        31 ~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g--~id  108 (305)
                      |+++||+||+||+|...+..+...|+.++++..++...+ ..+.+..+    ..+|..+.+    +.+++.+..+  .+|
T Consensus       143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~-~~~~lGAd----~vi~y~~~~----~~~~v~~~t~g~gvD  213 (326)
T COG0604         143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE-LLKELGAD----HVINYREED----FVEQVRELTGGKGVD  213 (326)
T ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH-HHHhcCCC----EEEcCCccc----HHHHHHHHcCCCCce
Confidence            899999999999999999888889977666655554444 33333333    223444433    4445544433  499


Q ss_pred             EEEEcCCC
Q 021960          109 ILYNNAGV  116 (305)
Q Consensus       109 ~li~nag~  116 (305)
                      +++...|.
T Consensus       214 vv~D~vG~  221 (326)
T COG0604         214 VVLDTVGG  221 (326)
T ss_pred             EEEECCCH
Confidence            99998774

>KOG4288 consensus Predicted oxidoreductase [General function prediction only]

Probab=97.45  E-value=0.0016  Score=54.91  Aligned_cols=216  Identities=17%  Similarity=0.126  Sum_probs=126.9

Q ss_pred             CCCCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHh
Q 021960           24 PSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSR  103 (305)
Q Consensus        24 ~~~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~  103 (305)
                      +...+++-.+.++.|+.+..|.++|+.....+..|.++.|++.. +.+  ......+.|+..|+-...-.+...      
T Consensus        45 d~~~dve~e~tlvlggnpfsgs~vlk~A~~vv~svgilsen~~k-~~l--~sw~~~vswh~gnsfssn~~k~~l------  115 (283)
T KOG4288|consen   45 DDKQDVEVEWTLVLGGNPFSGSEVLKNATNVVHSVGILSENENK-QTL--SSWPTYVSWHRGNSFSSNPNKLKL------  115 (283)
T ss_pred             cchhhhhHHHHhhhcCCCcchHHHHHHHHhhceeeeEeecccCc-chh--hCCCcccchhhccccccCcchhhh------
Confidence            33444555688999999999999999999999999999988652 211  123455777777765422111111      


Q ss_pred             cCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccch
Q 021960          104 YGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYT  183 (305)
Q Consensus       104 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~  183 (305)
                       ..+..++-++|..+.              ...+..+|=.......++...    .+..++++||....-.+.--...|-
T Consensus       116 -~g~t~v~e~~ggfgn--------------~~~m~~ing~ani~a~kaa~~----~gv~~fvyISa~d~~~~~~i~rGY~  176 (283)
T KOG4288|consen  116 -SGPTFVYEMMGGFGN--------------IILMDRINGTANINAVKAAAK----AGVPRFVYISAHDFGLPPLIPRGYI  176 (283)
T ss_pred             -cCCcccHHHhcCccc--------------hHHHHHhccHhhHHHHHHHHH----cCCceEEEEEhhhcCCCCccchhhh
Confidence             245666667665432              223344555555555555544    5677999999876533322234799


Q ss_pred             hhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHH---HHhhcCCC
Q 021960          184 ASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEE---FVSGLGNL  260 (305)
Q Consensus       184 ~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~  260 (305)
                      -+|.+.+.-..      ...+.+-..+.||++....  +....      .....-.+.|-+...+....   .+..++..
T Consensus       177 ~gKR~AE~Ell------~~~~~rgiilRPGFiyg~R--~v~g~------~~pL~~vg~pl~~~~~~a~k~~~kLp~lg~l  242 (283)
T KOG4288|consen  177 EGKREAEAELL------KKFRFRGIILRPGFIYGTR--NVGGI------KSPLHTVGEPLEMVLKFALKPLNKLPLLGPL  242 (283)
T ss_pred             ccchHHHHHHH------HhcCCCceeeccceeeccc--ccCcc------cccHHhhhhhHHHHHHhhhchhhcCcccccc
Confidence            99988764322      2345666789999996652  11100      00111112222222222211   12223344


Q ss_pred             CCCCCCHHHHHHHHHHhccCC
Q 021960          261 KGTTLRSKDIAEAALYLASDE  281 (305)
Q Consensus       261 ~~~~~~~~dva~~v~~l~s~~  281 (305)
                      ....+..|+||.+++-..++.
T Consensus       243 ~~ppvnve~VA~aal~ai~dp  263 (283)
T KOG4288|consen  243 LAPPVNVESVALAALKAIEDP  263 (283)
T ss_pred             cCCCcCHHHHHHHHHHhccCC
Confidence            555678999999999988876

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=97.31  E-value=0.0011  Score=55.04  Aligned_cols=78  Identities=27%  Similarity=0.347  Sum_probs=46.0

Q ss_pred             CCCCEEEEecC----------------CCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHH
Q 021960           29 LEGKVAIITGG----------------ARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEED   92 (305)
Q Consensus        29 l~~k~vlVtGa----------------s~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~   92 (305)
                      |+||.||||+|                ||..|.++|+.+..+|+.|+++..... ..      .+..+..+  ++.+.++
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~-~~------~p~~~~~i--~v~sa~e   71 (185)
T PF04127_consen    1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSS-LP------PPPGVKVI--RVESAEE   71 (185)
T ss_dssp             -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS-----------TTEEEE--E-SSHHH
T ss_pred             CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCcc-cc------ccccceEE--Eecchhh
Confidence            46788888865                578999999999999999998876532 11      02235444  4445544


Q ss_pred             HHHHHHHHHHhcCCccEEEEcCCCCC
Q 021960           93 IENLINSTVSRYGRLDILYNNAGVLG  118 (305)
Q Consensus        93 i~~~~~~~~~~~g~id~li~nag~~~  118 (305)
                      ..+   .+.+....-|++|++|+...
T Consensus        72 m~~---~~~~~~~~~Di~I~aAAVsD   94 (185)
T PF04127_consen   72 MLE---AVKELLPSADIIIMAAAVSD   94 (185)
T ss_dssp             HHH---HHHHHGGGGSEEEE-SB--S
T ss_pred             hhh---hhccccCcceeEEEecchhh
Confidence            444   44444445599999999753

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=97.29  E-value=0.0041  Score=56.00  Aligned_cols=79  Identities=19%  Similarity=0.303  Sum_probs=56.7

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDI  109 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~  109 (305)
                      .+++++|+|+++++|.++++.+...|++|+++++++...+.+.. ....    ..+|..+.+..+.+.+...+  +.+|+
T Consensus       166 ~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~~~~----~~~~~~~~~~~~~~~~~~~~--~~~d~  238 (342)
T cd08266         166 PGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAKE-LGAD----YVIDYRKEDFVREVRELTGK--RGVDV  238 (342)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cCCC----eEEecCChHHHHHHHHHhCC--CCCcE
Confidence            57899999999999999999999999999998887766554432 2111    22466665555555443322  35999


Q ss_pred             EEEcCC
Q 021960          110 LYNNAG  115 (305)
Q Consensus       110 li~nag  115 (305)
                      +++++|
T Consensus       239 ~i~~~g  244 (342)
T cd08266         239 VVEHVG  244 (342)
T ss_pred             EEECCc
Confidence            999987

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>PRK05086 malate dehydrogenase; Provisional

Probab=97.29  E-value=0.0019  Score=58.22  Aligned_cols=114  Identities=18%  Similarity=0.209  Sum_probs=60.4

Q ss_pred             CEEEEecCCCchHHHHHHHHHH-c--CCeEEEEecCcchhhhHhhhcC-CCCeEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 021960           32 KVAIITGGARGIGEAAVRLFAR-H--GAKVVIADVEDTLGSVLASTLA-PAPVTFVHCDVSLEEDIENLINSTVSRYGRL  107 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~-~--g~~vv~~~r~~~~~~~~~~~~~-~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~i  107 (305)
                      ++++|+||+|++|.+++..|.. .  +..++++++++.......+... .....+..++-.|   +.+       .....
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~~g~alDl~~~~~~~~i~~~~~~d---~~~-------~l~~~   70 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGED---PTP-------ALEGA   70 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCCcceehhhhcCCCCceEEEeCCCC---HHH-------HcCCC
Confidence            4689999999999999999865 3  3467888876432110001101 1011111111112   111       12359


Q ss_pred             cEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecc
Q 021960          108 DILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTAS  169 (305)
Q Consensus       108 d~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS  169 (305)
                      |+||.++|.....       ..+   -...+..|....    +.+.+.|.+.+..++|.+.|
T Consensus        71 DiVIitaG~~~~~-------~~~---R~dll~~N~~i~----~~ii~~i~~~~~~~ivivvs  118 (312)
T PRK05086         71 DVVLISAGVARKP-------GMD---RSDLFNVNAGIV----KNLVEKVAKTCPKACIGIIT  118 (312)
T ss_pred             CEEEEcCCCCCCC-------CCC---HHHHHHHHHHHH----HHHHHHHHHhCCCeEEEEcc
Confidence            9999999975321       112   233456666554    44455555455445555554

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=97.28  E-value=0.00081  Score=60.16  Aligned_cols=79  Identities=13%  Similarity=0.191  Sum_probs=63.7

Q ss_pred             EEEEecCCCchHHHHHHHHHH----cCCeEEEEecCcchhhhHhhhcCC------CCeEEEEecCCCHHHHHHHHHHHHH
Q 021960           33 VAIITGGARGIGEAAVRLFAR----HGAKVVIADVEDTLGSVLASTLAP------APVTFVHCDVSLEEDIENLINSTVS  102 (305)
Q Consensus        33 ~vlVtGas~giG~~ia~~l~~----~g~~vv~~~r~~~~~~~~~~~~~~------~~v~~~~~D~~d~~~i~~~~~~~~~  102 (305)
                      -++|-||||.-|.-+++++.+    .|.++.+.+|++++++...+....      ....++.||.+|++++++++++.  
T Consensus         7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak~~--   84 (423)
T KOG2733|consen    7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAKQA--   84 (423)
T ss_pred             eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHhhh--
Confidence            478999999999999999998    788899999999887765544411      12338899999999999999854  


Q ss_pred             hcCCccEEEEcCCCCC
Q 021960          103 RYGRLDILYNNAGVLG  118 (305)
Q Consensus       103 ~~g~id~li~nag~~~  118 (305)
                           .+||||+|...
T Consensus        85 -----~vivN~vGPyR   95 (423)
T KOG2733|consen   85 -----RVIVNCVGPYR   95 (423)
T ss_pred             -----EEEEeccccce
Confidence                 57999998653

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=97.28  E-value=0.002  Score=58.32  Aligned_cols=113  Identities=15%  Similarity=0.155  Sum_probs=69.2

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCC-------eEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHH--HHH--HHHH
Q 021960           33 VAIITGGARGIGEAAVRLFARHGA-------KVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIE--NLI--NSTV  101 (305)
Q Consensus        33 ~vlVtGas~giG~~ia~~l~~~g~-------~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~--~~~--~~~~  101 (305)
                      .+.|+|++|.+|.+++..|+..+.       .++++++++....          ......|+.|.....  .+.  ....
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~~----------a~g~~~Dl~d~~~~~~~~~~~~~~~~   70 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMKV----------LEGVVMELMDCAFPLLDGVVPTHDPA   70 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCcccc----------cceeEeehhcccchhcCceeccCChH
Confidence            378999999999999999998654       4888888644211          223455666544111  000  0112


Q ss_pred             HhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC--CCCEEEEecc
Q 021960          102 SRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINR--GGGCIISTAS  169 (305)
Q Consensus       102 ~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~~~iv~isS  169 (305)
                      +.....|+||+.||....          ..++..+.+..|+.-    ++.+.+.+.+.  ..+.++++|-
T Consensus        71 ~~~~~aDiVVitAG~~~~----------~~~tr~~ll~~N~~i----~k~i~~~i~~~~~~~~iiivvsN  126 (324)
T TIGR01758        71 VAFTDVDVAILVGAFPRK----------EGMERRDLLSKNVKI----FKEQGRALDKLAKKDCKVLVVGN  126 (324)
T ss_pred             HHhCCCCEEEEcCCCCCC----------CCCcHHHHHHHHHHH----HHHHHHHHHhhCCCCeEEEEeCC
Confidence            344579999999997422          112345566666644    56666666555  3577777775

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=97.19  E-value=0.0014  Score=57.20  Aligned_cols=74  Identities=12%  Similarity=0.240  Sum_probs=55.6

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEEEE
Q 021960           33 VAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILYN  112 (305)
Q Consensus        33 ~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~li~  112 (305)
                      .+||+|||+- |+.+++.|.++|+.|+...+++.....+... .   ...+..+..|.+++.+++.+.     ++|+||.
T Consensus         2 ~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~~-g---~~~v~~g~l~~~~l~~~l~~~-----~i~~VID   71 (256)
T TIGR00715         2 TVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYPIH-Q---ALTVHTGALDPQELREFLKRH-----SIDILVD   71 (256)
T ss_pred             eEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCcccccccc-C---CceEEECCCCHHHHHHHHHhc-----CCCEEEE
Confidence            6899999998 9999999999999999988887655444321 1   223456777887777776543     6999999


Q ss_pred             cCCC
Q 021960          113 NAGV  116 (305)
Q Consensus       113 nag~  116 (305)
                      .+..
T Consensus        72 AtHP   75 (256)
T TIGR00715        72 ATHP   75 (256)
T ss_pred             cCCH
Confidence            8764

This enzyme was found to be a monomer by gel filtration.

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.16  E-value=0.0012  Score=62.46  Aligned_cols=79  Identities=20%  Similarity=0.302  Sum_probs=49.9

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRL  107 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~i  107 (305)
                      ++.+|+++|||+++ +|+++|+.|++.|++|++.+++........+.+....+.+...+  +...+   .+      ..+
T Consensus         2 ~~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~g~~~~~~~--~~~~~---~~------~~~   69 (447)
T PRK02472          2 EYQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLEEGIKVICGS--HPLEL---LD------EDF   69 (447)
T ss_pred             CcCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhcCCEEEeCC--CCHHH---hc------CcC
Confidence            46789999999975 99999999999999999998765332222121211123332211  11111   11      148


Q ss_pred             cEEEEcCCCCC
Q 021960          108 DILYNNAGVLG  118 (305)
Q Consensus       108 d~li~nag~~~  118 (305)
                      |.||+++|+..
T Consensus        70 d~vV~s~gi~~   80 (447)
T PRK02472         70 DLMVKNPGIPY   80 (447)
T ss_pred             CEEEECCCCCC
Confidence            99999999753

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=97.14  E-value=0.007  Score=57.94  Aligned_cols=111  Identities=22%  Similarity=0.231  Sum_probs=70.1

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCH-------------HHHHH
Q 021960           29 LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLE-------------EDIEN   95 (305)
Q Consensus        29 l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~-------------~~i~~   95 (305)
                      ..+.+|+|+|+ |.+|...+..+...|+.|++++++..+.+..+. + +.  .++..|..+.             +..+.
T Consensus       163 ~pg~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~aes-l-GA--~~v~i~~~e~~~~~~gya~~~s~~~~~~  237 (509)
T PRK09424        163 VPPAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVES-M-GA--EFLELDFEEEGGSGDGYAKVMSEEFIKA  237 (509)
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c-CC--eEEEeccccccccccchhhhcchhHHHH
Confidence            35789999997 799999999999999999999999887776554 3 22  2233343221             11122


Q ss_pred             HHHHHHHhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecc
Q 021960           96 LINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTAS  169 (305)
Q Consensus        96 ~~~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS  169 (305)
                      ..+.+.+..+..|++|.++|..+..                       ++..+++..+..|  ++++.|+.++.
T Consensus       238 ~~~~~~~~~~gaDVVIetag~pg~~-----------------------aP~lit~~~v~~m--kpGgvIVdvg~  286 (509)
T PRK09424        238 EMALFAEQAKEVDIIITTALIPGKP-----------------------APKLITAEMVASM--KPGSVIVDLAA  286 (509)
T ss_pred             HHHHHHhccCCCCEEEECCCCCccc-----------------------CcchHHHHHHHhc--CCCCEEEEEcc
Confidence            2222233335699999999974321                       1112234555555  56678888875

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=97.11  E-value=0.006  Score=55.88  Aligned_cols=80  Identities=19%  Similarity=0.301  Sum_probs=51.9

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDI  109 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~  109 (305)
                      .|.++||+|++|++|..++..+...|++|+.+.+++.+.+.+...+...    ..+|..+.+...+.+.+...  +.+|+
T Consensus       158 ~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~lGa~----~vi~~~~~~~~~~~i~~~~~--~gvD~  231 (348)
T PLN03154        158 KGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFD----EAFNYKEEPDLDAALKRYFP--EGIDI  231 (348)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhcCCC----EEEECCCcccHHHHHHHHCC--CCcEE
Confidence            5789999999999999998888888999988877766655543233222    11233322223333322221  25899


Q ss_pred             EEEcCC
Q 021960          110 LYNNAG  115 (305)
Q Consensus       110 li~nag  115 (305)
                      ++.+.|
T Consensus       232 v~d~vG  237 (348)
T PLN03154        232 YFDNVG  237 (348)
T ss_pred             EEECCC
Confidence            998877

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.09  E-value=0.0022  Score=51.35  Aligned_cols=75  Identities=25%  Similarity=0.291  Sum_probs=52.0

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHcC-CeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 021960           29 LEGKVAIITGGARGIGEAAVRLFARHG-AKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRL  107 (305)
Q Consensus        29 l~~k~vlVtGas~giG~~ia~~l~~~g-~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~i  107 (305)
                      +++++++|+|+ |++|.++++.|++.| ..|.+.+|+....+.+.+.....   .+..+.++.++.          ....
T Consensus        17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~---~~~~~~~~~~~~----------~~~~   82 (155)
T cd01065          17 LKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGEL---GIAIAYLDLEEL----------LAEA   82 (155)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhc---ccceeecchhhc----------cccC
Confidence            56789999997 899999999999986 78999999876655544443211   122344443322          2468


Q ss_pred             cEEEEcCCCC
Q 021960          108 DILYNNAGVL  117 (305)
Q Consensus       108 d~li~nag~~  117 (305)
                      |+||++....
T Consensus        83 Dvvi~~~~~~   92 (155)
T cd01065          83 DLIINTTPVG   92 (155)
T ss_pred             CEEEeCcCCC
Confidence            9999988653

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=97.08  E-value=0.0079  Score=54.45  Aligned_cols=147  Identities=9%  Similarity=0.006  Sum_probs=88.4

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHcCC-------eEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHH-H---HHHHH
Q 021960           31 GKVAIITGGARGIGEAAVRLFARHGA-------KVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDI-E---NLINS   99 (305)
Q Consensus        31 ~k~vlVtGas~giG~~ia~~l~~~g~-------~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i-~---~~~~~   99 (305)
                      .++|.|+|++|.+|.+++..|+..|.       .+++++..+....          ......|+.+.... .   .+-..
T Consensus         2 p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~----------a~g~a~Dl~~~~~~~~~~~~i~~~   71 (322)
T cd01338           2 PVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKA----------LEGVAMELEDCAFPLLAEIVITDD   71 (322)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccc----------cceeehhhhhccccccCceEEecC
Confidence            35889999999999999999998775       6888888543210          11122222221100 0   00001


Q ss_pred             HHHhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC--CCEEEEecccccc----
Q 021960          100 TVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRG--GGCIISTASVAGV----  173 (305)
Q Consensus       100 ~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~~~iv~isS~~~~----  173 (305)
                      ..+....-|+||.+||....       ...+.   .+.+..|..-    ++.+.+.+.+..  .+.++++|--...    
T Consensus        72 ~~~~~~daDivvitaG~~~k-------~g~tR---~dll~~N~~i----~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~  137 (322)
T cd01338          72 PNVAFKDADWALLVGAKPRG-------PGMER---ADLLKANGKI----FTAQGKALNDVASRDVKVLVVGNPCNTNALI  137 (322)
T ss_pred             cHHHhCCCCEEEEeCCCCCC-------CCCcH---HHHHHHHHHH----HHHHHHHHHhhCCCCeEEEEecCcHHHHHHH
Confidence            12223468999999997421       11233   3345556544    455556565544  5677777643321    


Q ss_pred             ----cC-CCCCccchhhHHHHHHHHHHHHHHHC
Q 021960          174 ----MG-GLGPHAYTASKHAIVGLTKNAACELG  201 (305)
Q Consensus       174 ----~~-~~~~~~Y~~sKaa~~~~~~~la~e~~  201 (305)
                          .| .|....|+.++.--..|...+++.+.
T Consensus       138 ~~k~sg~~p~~~ViG~t~LDs~Rl~~~la~~lg  170 (322)
T cd01338         138 AMKNAPDIPPDNFTAMTRLDHNRAKSQLAKKAG  170 (322)
T ss_pred             HHHHcCCCChHheEEehHHHHHHHHHHHHHHhC
Confidence                22 55667899999999999999999875

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR00518 alaDH alanine dehydrogenase

Probab=97.04  E-value=0.0056  Score=56.56  Aligned_cols=76  Identities=25%  Similarity=0.299  Sum_probs=54.0

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 021960           29 LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLD  108 (305)
Q Consensus        29 l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id  108 (305)
                      +.++.++|.|+ |.+|+.+++.+...|++|++++++..+.+.+......    .+..+..+.+.+.+.+       ...|
T Consensus       165 l~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~----~v~~~~~~~~~l~~~l-------~~aD  232 (370)
T TIGR00518       165 VEPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGG----RIHTRYSNAYEIEDAV-------KRAD  232 (370)
T ss_pred             CCCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCc----eeEeccCCHHHHHHHH-------ccCC
Confidence            45677999987 7999999999999999999999987665554433321    1223455655554443       3579


Q ss_pred             EEEEcCCC
Q 021960          109 ILYNNAGV  116 (305)
Q Consensus       109 ~li~nag~  116 (305)
                      +||++++.
T Consensus       233 vVI~a~~~  240 (370)
T TIGR00518       233 LLIGAVLI  240 (370)
T ss_pred             EEEEcccc
Confidence            99998754

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PRK06849 hypothetical protein; Provisional

Probab=97.01  E-value=0.0056  Score=56.97  Aligned_cols=83  Identities=20%  Similarity=0.187  Sum_probs=54.6

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDI  109 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~  109 (305)
                      +.++|||||++..+|.++++.|.+.|++|++++.............  .....+...-.|.+...+.+.++.++. ++|.
T Consensus         3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~~~~s~~~--d~~~~~p~p~~d~~~~~~~L~~i~~~~-~id~   79 (389)
T PRK06849          3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKYPLSRFSRAV--DGFYTIPSPRWDPDAYIQALLSIVQRE-NIDL   79 (389)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHhh--hheEEeCCCCCCHHHHHHHHHHHHHHc-CCCE
Confidence            4689999999999999999999999999999988754433222221  112222223345544444444555554 5899


Q ss_pred             EEEcCC
Q 021960          110 LYNNAG  115 (305)
Q Consensus       110 li~nag  115 (305)
                      ||-...
T Consensus        80 vIP~~e   85 (389)
T PRK06849         80 LIPTCE   85 (389)
T ss_pred             EEECCh
Confidence            987654

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=97.00  E-value=0.0023  Score=56.77  Aligned_cols=47  Identities=26%  Similarity=0.343  Sum_probs=39.9

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcC-CeEEEEecCcchhhhHhhhc
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHG-AKVVIADVEDTLGSVLASTL   75 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g-~~vv~~~r~~~~~~~~~~~~   75 (305)
                      .+.++.++|+|+ ||+|++++..|++.| .+|.+++|+..+.+.+.+.+
T Consensus       120 ~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~  167 (278)
T PRK00258        120 DLKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLF  167 (278)
T ss_pred             CCCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHh
Confidence            567899999997 899999999999999 68999999877766665544

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=96.90  E-value=0.0042  Score=54.86  Aligned_cols=74  Identities=18%  Similarity=0.240  Sum_probs=50.9

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCC-CCeEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 021960           29 LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAP-APVTFVHCDVSLEEDIENLINSTVSRYGRL  107 (305)
Q Consensus        29 l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~i~~~~~~~~~~~g~i  107 (305)
                      ..+|.++|+|+ ||+|++++..|++.|++|.+++|+..+.+.+.+.... ..+...  ++.+      .      .....
T Consensus       115 ~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~~~~~--~~~~------~------~~~~~  179 (270)
T TIGR00507       115 RPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGEIQAF--SMDE------L------PLHRV  179 (270)
T ss_pred             ccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCceEEe--chhh------h------cccCc
Confidence            45789999998 7999999999999999999999987766555544321 112221  1111      0      11358


Q ss_pred             cEEEEcCCCC
Q 021960          108 DILYNNAGVL  117 (305)
Q Consensus       108 d~li~nag~~  117 (305)
                      |+||++.+..
T Consensus       180 DivInatp~g  189 (270)
T TIGR00507       180 DLIINATSAG  189 (270)
T ss_pred             cEEEECCCCC
Confidence            9999998753

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=96.88  E-value=0.017  Score=52.26  Aligned_cols=73  Identities=19%  Similarity=0.252  Sum_probs=52.7

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDI  109 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~  109 (305)
                      .|++++|+|++ |+|...++.....|++|+.++|++.+.+...+.- ..    +..|.+|.+..+.+-+       .+|.
T Consensus       166 pG~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~lG-Ad----~~i~~~~~~~~~~~~~-------~~d~  232 (339)
T COG1064         166 PGKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKLELAKKLG-AD----HVINSSDSDALEAVKE-------IADA  232 (339)
T ss_pred             CCCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHHHHHHHhC-Cc----EEEEcCCchhhHHhHh-------hCcE
Confidence            48999999997 9998888777779999999999988777655432 22    2234445544444332       2899


Q ss_pred             EEEcCC
Q 021960          110 LYNNAG  115 (305)
Q Consensus       110 li~nag  115 (305)
                      +|.+++
T Consensus       233 ii~tv~  238 (339)
T COG1064         233 IIDTVG  238 (339)
T ss_pred             EEECCC
Confidence            999887

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=96.87  E-value=0.0046  Score=56.18  Aligned_cols=80  Identities=19%  Similarity=0.309  Sum_probs=52.8

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDI  109 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~  109 (305)
                      .|+++||+||+|++|..++..+...|++|+.+.+++.+.+.+.+.+...  .+  +|..+.++..+.+.+...  +.+|+
T Consensus       151 ~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~lGa~--~v--i~~~~~~~~~~~i~~~~~--~gvd~  224 (338)
T cd08295         151 KGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKLGFD--DA--FNYKEEPDLDAALKRYFP--NGIDI  224 (338)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCc--ee--EEcCCcccHHHHHHHhCC--CCcEE
Confidence            5789999999999999999888888999988888776666554423221  11  233322233333333221  35899


Q ss_pred             EEEcCC
Q 021960          110 LYNNAG  115 (305)
Q Consensus       110 li~nag  115 (305)
                      ++.+.|
T Consensus       225 v~d~~g  230 (338)
T cd08295         225 YFDNVG  230 (338)
T ss_pred             EEECCC
Confidence            998876

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=96.85  E-value=0.013  Score=51.59  Aligned_cols=79  Identities=16%  Similarity=0.253  Sum_probs=55.1

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcC-Ccc
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYG-RLD  108 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g-~id  108 (305)
                      .|++++|++|+|.+|.-+...-.-+|++|+.+.-.+++...+.+.+.-+    ..+|-...    ++.+.+.+..+ .||
T Consensus       150 ~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~lGfD----~~idyk~~----d~~~~L~~a~P~GID  221 (340)
T COG2130         150 AGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELGFD----AGIDYKAE----DFAQALKEACPKGID  221 (340)
T ss_pred             CCCEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhcCCc----eeeecCcc----cHHHHHHHHCCCCeE
Confidence            5899999999999998766555567999999887777777666655322    22344443    33344444444 499


Q ss_pred             EEEEcCCC
Q 021960          109 ILYNNAGV  116 (305)
Q Consensus       109 ~li~nag~  116 (305)
                      +.+-|.|.
T Consensus       222 vyfeNVGg  229 (340)
T COG2130         222 VYFENVGG  229 (340)
T ss_pred             EEEEcCCc
Confidence            99999984

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=96.80  E-value=0.033  Score=47.94  Aligned_cols=36  Identities=28%  Similarity=0.495  Sum_probs=30.1

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCC-eEEEEecC
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGA-KVVIADVE   64 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~-~vv~~~r~   64 (305)
                      .|++.+|+|.|. ||+|..+++.|+..|. ++++++.+
T Consensus         8 ~L~~~~VlVvG~-GGvGs~va~~Lar~GVg~i~LvD~D   44 (231)
T cd00755           8 KLRNAHVAVVGL-GGVGSWAAEALARSGVGKLTLIDFD   44 (231)
T ss_pred             HHhCCCEEEECC-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            456789999996 7999999999999998 57777644

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=96.76  E-value=0.034  Score=48.88  Aligned_cols=37  Identities=22%  Similarity=0.399  Sum_probs=30.8

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCC-eEEEEecC
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGA-KVVIADVE   64 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~-~vv~~~r~   64 (305)
                      ..|.+..|+|.|+ ||+|..+++.|+..|. ++.+++.+
T Consensus        26 ~kL~~s~VlVvG~-GGVGs~vae~Lar~GVg~itLiD~D   63 (268)
T PRK15116         26 QLFADAHICVVGI-GGVGSWAAEALARTGIGAITLIDMD   63 (268)
T ss_pred             HHhcCCCEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            3567889999986 7999999999999995 67777654

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=96.72  E-value=0.011  Score=54.12  Aligned_cols=79  Identities=23%  Similarity=0.313  Sum_probs=55.2

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHh-cCCcc
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSR-YGRLD  108 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~-~g~id  108 (305)
                      .|+.+||.||+||+|...++.....|+..+++.++++..+..+ .+...    ..+|..+.+-++    ++.+. .+++|
T Consensus       157 ~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~l~k-~lGAd----~vvdy~~~~~~e----~~kk~~~~~~D  227 (347)
T KOG1198|consen  157 KGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLELVK-KLGAD----EVVDYKDENVVE----LIKKYTGKGVD  227 (347)
T ss_pred             CCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHHHHH-HcCCc----EeecCCCHHHHH----HHHhhcCCCcc
Confidence            5889999999999999999888888866666666666655544 33322    335777743333    33332 45799


Q ss_pred             EEEEcCCCC
Q 021960          109 ILYNNAGVL  117 (305)
Q Consensus       109 ~li~nag~~  117 (305)
                      +|+-|.|..
T Consensus       228 vVlD~vg~~  236 (347)
T KOG1198|consen  228 VVLDCVGGS  236 (347)
T ss_pred             EEEECCCCC
Confidence            999999863

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=96.64  E-value=0.012  Score=52.20  Aligned_cols=79  Identities=24%  Similarity=0.394  Sum_probs=54.0

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDI  109 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~  109 (305)
                      .+++++|+|+++++|..+++.+...|++|+++++++...+.+.+ ....    ..+|..+.+..+.+.+ .... +.+|.
T Consensus       139 ~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~g~~----~~~~~~~~~~~~~~~~-~~~~-~~~d~  211 (323)
T cd05276         139 AGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEACRA-LGAD----VAINYRTEDFAEEVKE-ATGG-RGVDV  211 (323)
T ss_pred             CCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHH-cCCC----EEEeCCchhHHHHHHH-HhCC-CCeEE
Confidence            57899999999999999999999999999988887666555532 2211    2244444333333332 2111 35999


Q ss_pred             EEEcCC
Q 021960          110 LYNNAG  115 (305)
Q Consensus       110 li~nag  115 (305)
                      +++++|
T Consensus       212 vi~~~g  217 (323)
T cd05276         212 ILDMVG  217 (323)
T ss_pred             EEECCc
Confidence            999887

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=96.62  E-value=0.029  Score=51.12  Aligned_cols=76  Identities=22%  Similarity=0.320  Sum_probs=51.2

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCC-eEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGA-KVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLD  108 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~-~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id  108 (305)
                      .+++++|+|+ |++|...+..+...|+ +|+++++++.+.+.+.+ +...    ...|..+. ++.++.    +..+.+|
T Consensus       169 ~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~-lGa~----~vi~~~~~-~~~~~~----~~~g~~D  237 (343)
T PRK09880        169 QGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLARE-MGAD----KLVNPQND-DLDHYK----AEKGYFD  237 (343)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHH-cCCc----EEecCCcc-cHHHHh----ccCCCCC
Confidence            5889999986 8999999988888898 58888888777665543 3222    12344432 233222    2235699


Q ss_pred             EEEEcCCC
Q 021960          109 ILYNNAGV  116 (305)
Q Consensus       109 ~li~nag~  116 (305)
                      ++|.+.|.
T Consensus       238 ~vid~~G~  245 (343)
T PRK09880        238 VSFEVSGH  245 (343)
T ss_pred             EEEECCCC
Confidence            99998883

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=96.61  E-value=0.035  Score=43.93  Aligned_cols=110  Identities=23%  Similarity=0.314  Sum_probs=63.7

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCC--eEEEEecCcchhhhHhhhc------CCCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           33 VAIITGGARGIGEAAVRLFARHGA--KVVIADVEDTLGSVLASTL------APAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        33 ~vlVtGas~giG~~ia~~l~~~g~--~vv~~~r~~~~~~~~~~~~------~~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      ++.|+|++|.+|.+++..|+..+.  +++++++++...+.....+      .........   .+++.+           
T Consensus         2 KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~---~~~~~~-----------   67 (141)
T PF00056_consen    2 KVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITS---GDYEAL-----------   67 (141)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEE---SSGGGG-----------
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccc---cccccc-----------
Confidence            688999999999999999998875  6999999865433322211      111122222   232222           


Q ss_pred             CCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHc-CCCCEEEEeccc
Q 021960          105 GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMIN-RGGGCIISTASV  170 (305)
Q Consensus       105 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~~iv~isS~  170 (305)
                      ..-|++|..||....       ...+.   .+.+..|..-.    +.+.+.+.+ ...+.++++|-.
T Consensus        68 ~~aDivvitag~~~~-------~g~sR---~~ll~~N~~i~----~~~~~~i~~~~p~~~vivvtNP  120 (141)
T PF00056_consen   68 KDADIVVITAGVPRK-------PGMSR---LDLLEANAKIV----KEIAKKIAKYAPDAIVIVVTNP  120 (141)
T ss_dssp             TTESEEEETTSTSSS-------TTSSH---HHHHHHHHHHH----HHHHHHHHHHSTTSEEEE-SSS
T ss_pred             ccccEEEEecccccc-------ccccH---HHHHHHhHhHH----HHHHHHHHHhCCccEEEEeCCc
Confidence            368999999997421       11233   33455565443    444444433 345677776643

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=96.59  E-value=0.0091  Score=53.89  Aligned_cols=79  Identities=20%  Similarity=0.295  Sum_probs=52.6

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDI  109 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~  109 (305)
                      .|.++||+||+|++|..++..+...|++|+.+.+++.+.+.+.+ +... .   .+|..+.+...+.++....  +.+|+
T Consensus       138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~~~-lGa~-~---vi~~~~~~~~~~~~~~~~~--~gvdv  210 (325)
T TIGR02825       138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYLKK-LGFD-V---AFNYKTVKSLEETLKKASP--DGYDC  210 (325)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cCCC-E---EEeccccccHHHHHHHhCC--CCeEE
Confidence            47899999999999999988877889999988887766655533 3221 1   1233332233343333321  25899


Q ss_pred             EEEcCC
Q 021960          110 LYNNAG  115 (305)
Q Consensus       110 li~nag  115 (305)
                      ++.+.|
T Consensus       211 v~d~~G  216 (325)
T TIGR02825       211 YFDNVG  216 (325)
T ss_pred             EEECCC
Confidence            998877

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.57  E-value=0.032  Score=49.62  Aligned_cols=66  Identities=20%  Similarity=0.259  Sum_probs=47.3

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCC-CHHHHHHHHHHH
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVS-LEEDIENLINST  100 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~-d~~~i~~~~~~~  100 (305)
                      .|+++-|+|+.| ||.--++.-...|++|+++++++...++.-+.+..+    ..+|.+ |.+.++++.+..
T Consensus       181 pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LGAd----~fv~~~~d~d~~~~~~~~~  247 (360)
T KOG0023|consen  181 PGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLGAD----VFVDSTEDPDIMKAIMKTT  247 (360)
T ss_pred             CCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcCcc----eeEEecCCHHHHHHHHHhh
Confidence            589999999876 997655555567999999999886666555555444    224666 777777776643

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=96.56  E-value=0.03  Score=53.65  Aligned_cols=83  Identities=20%  Similarity=0.214  Sum_probs=57.3

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCC-------------HHHHHH
Q 021960           29 LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSL-------------EEDIEN   95 (305)
Q Consensus        29 l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d-------------~~~i~~   95 (305)
                      ..+.+++|.|+ |.+|...+..+...|+.|++++++..+.+..+. +.   ..++..|..+             .+..+.
T Consensus       162 vp~akVlViGa-G~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~~-lG---a~~v~v~~~e~g~~~~gYa~~~s~~~~~~  236 (511)
T TIGR00561       162 VPPAKVLVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQS-MG---AEFLELDFKEEGGSGDGYAKVMSEEFIAA  236 (511)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cC---CeEEeccccccccccccceeecCHHHHHH
Confidence            34679999996 899999999999999999999988876655443 32   3344445421             233444


Q ss_pred             HHHHHHHhcCCccEEEEcCCC
Q 021960           96 LINSTVSRYGRLDILYNNAGV  116 (305)
Q Consensus        96 ~~~~~~~~~g~id~li~nag~  116 (305)
                      ..+.+.+.....|++|+++-.
T Consensus       237 ~~~~~~e~~~~~DIVI~Tali  257 (511)
T TIGR00561       237 EMELFAAQAKEVDIIITTALI  257 (511)
T ss_pred             HHHHHHHHhCCCCEEEECccc
Confidence            444455555679999998843

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=96.52  E-value=0.0041  Score=60.21  Aligned_cols=47  Identities=32%  Similarity=0.420  Sum_probs=40.0

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL   75 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~   75 (305)
                      .+++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+.+.+.+
T Consensus       376 ~~~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l  422 (529)
T PLN02520        376 PLAGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELADAV  422 (529)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh
Confidence            567899999998 69999999999999999999999876666655443

>cd08293 PTGR2 Prostaglandin reductase

Probab=96.52  E-value=0.011  Score=53.65  Aligned_cols=79  Identities=18%  Similarity=0.244  Sum_probs=51.0

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHcCC-eEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 021960           31 GKVAIITGGARGIGEAAVRLFARHGA-KVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDI  109 (305)
Q Consensus        31 ~k~vlVtGas~giG~~ia~~l~~~g~-~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~  109 (305)
                      ++++||+||+|++|..++..+...|+ +|+.+.+++.+.+.+.+.+... . +  +|..+ +++.+.+.++..  +.+|+
T Consensus       155 ~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~-~-v--i~~~~-~~~~~~i~~~~~--~gvd~  227 (345)
T cd08293         155 NQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFD-A-A--INYKT-DNVAERLRELCP--EGVDV  227 (345)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCc-E-E--EECCC-CCHHHHHHHHCC--CCceE
Confidence            38999999999999999887778898 7988888776665554433222 1 1  23333 222222222221  35999


Q ss_pred             EEEcCCC
Q 021960          110 LYNNAGV  116 (305)
Q Consensus       110 li~nag~  116 (305)
                      ++.+.|.
T Consensus       228 vid~~g~  234 (345)
T cd08293         228 YFDNVGG  234 (345)
T ss_pred             EEECCCc
Confidence            9988773

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=96.52  E-value=0.011  Score=53.20  Aligned_cols=75  Identities=23%  Similarity=0.362  Sum_probs=50.4

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDI  109 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~  109 (305)
                      .+.+++|+|+++++|.++++.+...|++|+.+.+++...+.+.. .. . ...  .|.   ++..+   .+. ....+|+
T Consensus       162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~~-~-~~~--~~~---~~~~~---~~~-~~~~~d~  229 (332)
T cd08259         162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKILKE-LG-A-DYV--IDG---SKFSE---DVK-KLGGADV  229 (332)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHH-cC-C-cEE--Eec---HHHHH---HHH-hccCCCE
Confidence            47899999999999999999999999999988877665554422 21 1 111  122   11222   222 2236999


Q ss_pred             EEEcCCC
Q 021960          110 LYNNAGV  116 (305)
Q Consensus       110 li~nag~  116 (305)
                      +++++|.
T Consensus       230 v~~~~g~  236 (332)
T cd08259         230 VIELVGS  236 (332)
T ss_pred             EEECCCh
Confidence            9999873

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A

Probab=96.51  E-value=0.004  Score=43.07  Aligned_cols=34  Identities=26%  Similarity=0.332  Sum_probs=22.2

Q ss_pred             CEEEEecCCCchHHHHHHHHH-HcCCeEEEEecCc
Q 021960           32 KVAIITGGARGIGEAAVRLFA-RHGAKVVIADVED   65 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~-~~g~~vv~~~r~~   65 (305)
                      |+|||+|+|+|.|++-...++ ..|++.+.++.+.
T Consensus        40 K~VLViGaStGyGLAsRIa~aFg~gA~TiGV~fEk   74 (78)
T PF12242_consen   40 KKVLVIGASTGYGLASRIAAAFGAGADTIGVSFEK   74 (78)
T ss_dssp             SEEEEES-SSHHHHHHHHHHHHCC--EEEEEE---
T ss_pred             ceEEEEecCCcccHHHHHHHHhcCCCCEEEEeecc
Confidence            899999999999999444444 6678887776543

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=96.41  E-value=0.0051  Score=51.80  Aligned_cols=48  Identities=25%  Similarity=0.371  Sum_probs=39.9

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhh
Q 021960           26 HRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLAST   74 (305)
Q Consensus        26 ~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~   74 (305)
                      ..++.||+++|+|. |.+|+.+++.|.+.|++|++.+++....+...+.
T Consensus        23 ~~~l~gk~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~   70 (200)
T cd01075          23 TDSLEGKTVAVQGL-GKVGYKLAEHLLEEGAKLIVADINEEAVARAAEL   70 (200)
T ss_pred             CCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH
Confidence            34678999999998 5999999999999999999999887665554443

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=96.38  E-value=0.015  Score=51.87  Aligned_cols=41  Identities=20%  Similarity=0.284  Sum_probs=36.3

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhh
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGS   69 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~   69 (305)
                      .+.|++++|+|. |++|+++++.|...|++|.+.+|+.....
T Consensus       148 ~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~  188 (287)
T TIGR02853       148 TIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLA  188 (287)
T ss_pred             CCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence            678999999997 78999999999999999999999875543

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=96.37  E-value=0.014  Score=54.78  Aligned_cols=75  Identities=20%  Similarity=0.312  Sum_probs=53.4

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCC-eEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCC
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGA-KVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGR  106 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~-~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~  106 (305)
                      ++.+++++|.|+ ||.|+.+++.|++.|+ ++.++.|+..+.+.+.+.+...  .     ....++....+       ..
T Consensus       178 ~l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~--~-----~~~~~~l~~~l-------~~  242 (414)
T PRK13940        178 NISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNA--S-----AHYLSELPQLI-------KK  242 (414)
T ss_pred             CccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCC--e-----EecHHHHHHHh-------cc
Confidence            567899999997 8999999999999996 6889999877766666554211  1     11223333333       35


Q ss_pred             ccEEEEcCCCC
Q 021960          107 LDILYNNAGVL  117 (305)
Q Consensus       107 id~li~nag~~  117 (305)
                      .|+||++.+..
T Consensus       243 aDiVI~aT~a~  253 (414)
T PRK13940        243 ADIIIAAVNVL  253 (414)
T ss_pred             CCEEEECcCCC
Confidence            89999988753

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=96.36  E-value=0.016  Score=49.76  Aligned_cols=75  Identities=20%  Similarity=0.253  Sum_probs=55.1

Q ss_pred             CEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEEE
Q 021960           32 KVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILY  111 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~li  111 (305)
                      +.++|.|+ |-+|..+|+.|.++|++|+++++++...+....  .....+.+.+|-+|.+-++++=      ....|++|
T Consensus         1 m~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~--~~~~~~~v~gd~t~~~~L~~ag------i~~aD~vv   71 (225)
T COG0569           1 MKIIIIGA-GRVGRSVARELSEEGHNVVLIDRDEERVEEFLA--DELDTHVVIGDATDEDVLEEAG------IDDADAVV   71 (225)
T ss_pred             CEEEEECC-cHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhh--hhcceEEEEecCCCHHHHHhcC------CCcCCEEE
Confidence            35778886 789999999999999999999998877555222  1234788999999987666541      12567777


Q ss_pred             EcCC
Q 021960          112 NNAG  115 (305)
Q Consensus       112 ~nag  115 (305)
                      ..-|
T Consensus        72 a~t~   75 (225)
T COG0569          72 AATG   75 (225)
T ss_pred             EeeC
Confidence            6655

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=96.34  E-value=0.0094  Score=52.76  Aligned_cols=48  Identities=23%  Similarity=0.364  Sum_probs=40.8

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCC-eEEEEecCcchhhhHhhhcC
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGA-KVVIADVEDTLGSVLASTLA   76 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~-~vv~~~r~~~~~~~~~~~~~   76 (305)
                      +..++.++|.|| ||-+++++..|++.|. +++++.|+.++.+.+.+...
T Consensus       123 ~~~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~  171 (283)
T COG0169         123 DVTGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFG  171 (283)
T ss_pred             ccCCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhh
Confidence            446899999996 7899999999999996 69999999888777776653

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=96.30  E-value=0.028  Score=53.28  Aligned_cols=78  Identities=23%  Similarity=0.254  Sum_probs=54.4

Q ss_pred             CCCCCEEEEecC----------------CCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHH
Q 021960           28 RLEGKVAIITGG----------------ARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEE   91 (305)
Q Consensus        28 ~l~~k~vlVtGa----------------s~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~   91 (305)
                      +|+||.||||+|                ||-.|.++|+.+..+|++|.++.-... .      .....+.++.+  .   
T Consensus       253 ~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~-~------~~p~~v~~i~V--~---  320 (475)
T PRK13982        253 PLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVD-L------ADPQGVKVIHV--E---  320 (475)
T ss_pred             ccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcC-C------CCCCCceEEEe--c---
Confidence            589999999976                477899999999999999998863321 0      01223555543  2   


Q ss_pred             HHHHHHHHHHHhcCCccEEEEcCCCCC
Q 021960           92 DIENLINSTVSRYGRLDILYNNAGVLG  118 (305)
Q Consensus        92 ~i~~~~~~~~~~~g~id~li~nag~~~  118 (305)
                      +.+++.+.+.+.+. .|++|++|+...
T Consensus       321 ta~eM~~av~~~~~-~Di~I~aAAVaD  346 (475)
T PRK13982        321 SARQMLAAVEAALP-ADIAIFAAAVAD  346 (475)
T ss_pred             CHHHHHHHHHhhCC-CCEEEEeccccc
Confidence            34455555555554 799999998754

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=96.25  E-value=0.078  Score=47.71  Aligned_cols=111  Identities=18%  Similarity=0.226  Sum_probs=65.3

Q ss_pred             CEEEEecCCCchHHHHHHHHHHcC--CeEEEEecCcchhhhHhhhcC------CCCeEEEEecCCCHHHHHHHHHHHHHh
Q 021960           32 KVAIITGGARGIGEAAVRLFARHG--AKVVIADVEDTLGSVLASTLA------PAPVTFVHCDVSLEEDIENLINSTVSR  103 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~g--~~vv~~~r~~~~~~~~~~~~~------~~~v~~~~~D~~d~~~i~~~~~~~~~~  103 (305)
                      +++.|.|+ |++|.+++..|+..|  ..++++++++...+.....+.      ...+...   ..+.+.+          
T Consensus         1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~---~~~~~~l----------   66 (306)
T cd05291           1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIK---AGDYSDC----------   66 (306)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEE---cCCHHHh----------
Confidence            36788996 899999999999999  479999998766544333221      1112221   1232211          


Q ss_pred             cCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC-CCCEEEEecccc
Q 021960          104 YGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINR-GGGCIISTASVA  171 (305)
Q Consensus       104 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~isS~~  171 (305)
                       ..-|++|+++|....       ...+..   ..++.|..-    ++.+.+.+.+. ..+.++++|-..
T Consensus        67 -~~aDIVIitag~~~~-------~g~~R~---dll~~N~~i----~~~~~~~i~~~~~~~~vivvsNP~  120 (306)
T cd05291          67 -KDADIVVITAGAPQK-------PGETRL---DLLEKNAKI----MKSIVPKIKASGFDGIFLVASNPV  120 (306)
T ss_pred             -CCCCEEEEccCCCCC-------CCCCHH---HHHHHHHHH----HHHHHHHHHHhCCCeEEEEecChH
Confidence             368999999986421       112332   334555543    44444444443 356777777543

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=96.23  E-value=0.016  Score=51.54  Aligned_cols=47  Identities=23%  Similarity=0.332  Sum_probs=39.6

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCC-eEEEEecCcchhhhHhhhc
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGA-KVVIADVEDTLGSVLASTL   75 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~-~vv~~~r~~~~~~~~~~~~   75 (305)
                      .++++.++|.|+ ||.|++++..|++.|+ +|.+++|+.++.+.+.+.+
T Consensus       124 ~~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l  171 (284)
T PRK12549        124 DASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADEL  171 (284)
T ss_pred             CccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHH
Confidence            456789999996 7899999999999998 6999999987777666544

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=96.22  E-value=0.014  Score=51.86  Aligned_cols=47  Identities=23%  Similarity=0.258  Sum_probs=39.2

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCC-eEEEEecCcchhhhHhhhc
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGA-KVVIADVEDTLGSVLASTL   75 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~-~vv~~~r~~~~~~~~~~~~   75 (305)
                      .++++.++|.|+ ||.|++++..|++.|+ +|.++.|+.++.+.+.+..
T Consensus       122 ~~~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~  169 (282)
T TIGR01809       122 PLAGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLG  169 (282)
T ss_pred             ccCCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHh
Confidence            357899999986 8999999999999997 5999999987776665543

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=96.19  E-value=0.032  Score=49.82  Aligned_cols=78  Identities=19%  Similarity=0.288  Sum_probs=60.4

Q ss_pred             CEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEEE
Q 021960           32 KVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILY  111 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~li  111 (305)
                      ...+|-||+|..|.-+|++|+.+|.+-++.+|+..+...+...+... ....  ++-++..++++++       ..++|+
T Consensus         7 ~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~LG~~-~~~~--p~~~p~~~~~~~~-------~~~VVl   76 (382)
T COG3268           7 YDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASLGPE-AAVF--PLGVPAALEAMAS-------RTQVVL   76 (382)
T ss_pred             eeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhcCcc-cccc--CCCCHHHHHHHHh-------cceEEE
Confidence            36789999999999999999999999999999998888777666432 3333  3444666666654       578999


Q ss_pred             EcCCCCCC
Q 021960          112 NNAGVLGN  119 (305)
Q Consensus       112 ~nag~~~~  119 (305)
                      ||+|.+..
T Consensus        77 ncvGPyt~   84 (382)
T COG3268          77 NCVGPYTR   84 (382)
T ss_pred             eccccccc
Confidence            99997643

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=96.17  E-value=0.031  Score=51.02  Aligned_cols=37  Identities=32%  Similarity=0.576  Sum_probs=31.9

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCC-eEEEEecC
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGA-KVVIADVE   64 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~-~vv~~~r~   64 (305)
                      ..+.+++|+|.|+ ||+|..+++.|+..|. ++.+++++
T Consensus        20 ~~L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D   57 (338)
T PRK12475         20 RKIREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRD   57 (338)
T ss_pred             HhhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            4667889999996 7999999999999998 68877765

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=96.11  E-value=0.017  Score=55.18  Aligned_cols=45  Identities=29%  Similarity=0.398  Sum_probs=37.9

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhh
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLAS   73 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~   73 (305)
                      ++.+++++|+|+ ||+|++++..|++.|++|++++|+....+.+.+
T Consensus       329 ~~~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~  373 (477)
T PRK09310        329 PLNNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALAS  373 (477)
T ss_pred             CcCCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence            467899999996 799999999999999999999988766555443

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=96.10  E-value=0.023  Score=50.46  Aligned_cols=47  Identities=23%  Similarity=0.442  Sum_probs=38.6

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCC-eEEEEecCcchhhhHhhhc
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGA-KVVIADVEDTLGSVLASTL   75 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~-~vv~~~r~~~~~~~~~~~~   75 (305)
                      ..++|.++|.|+ ||-+++++..|++.|+ ++.++.|+..+.+.+.+.+
T Consensus       124 ~~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~  171 (283)
T PRK14027        124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVI  171 (283)
T ss_pred             CcCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHH
Confidence            356889999997 8999999999999997 5889999877766665543

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.05  E-value=0.026  Score=46.07  Aligned_cols=38  Identities=21%  Similarity=0.386  Sum_probs=33.5

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecC
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVE   64 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~   64 (305)
                      .++.+|.++|.|++.-+|..+++.|.++|++|.++.|+
T Consensus        40 ~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~   77 (168)
T cd01080          40 IDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSK   77 (168)
T ss_pred             CCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECC
Confidence            46889999999996557999999999999999888876

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=96.03  E-value=0.042  Score=46.28  Aligned_cols=37  Identities=32%  Similarity=0.538  Sum_probs=31.5

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCC-eEEEEecC
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGA-KVVIADVE   64 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~-~vv~~~r~   64 (305)
                      ..+.+++|+|.|+ ||+|..+++.|+..|. ++.+++.+
T Consensus        17 ~kl~~~~VlviG~-GglGs~ia~~La~~Gv~~i~lvD~d   54 (202)
T TIGR02356        17 QRLLNSHVLIIGA-GGLGSPAALYLAGAGVGTIVIVDDD   54 (202)
T ss_pred             HHhcCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEecCC
Confidence            3567889999995 7999999999999998 68887665

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=96.03  E-value=0.028  Score=48.70  Aligned_cols=78  Identities=23%  Similarity=0.317  Sum_probs=52.0

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDI  109 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~  109 (305)
                      .+++++|+|+++ +|.++++.+...|.+|+++.+++...+.+.. ....    ..+|..+.+....+.   ....+.+|+
T Consensus       134 ~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~----~~~~~~~~~~~~~~~---~~~~~~~d~  204 (271)
T cd05188         134 PGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELAKE-LGAD----HVIDYKEEDLEEELR---LTGGGGADV  204 (271)
T ss_pred             CCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHHHH-hCCc----eeccCCcCCHHHHHH---HhcCCCCCE
Confidence            578999999988 9999999888899999999887665554432 2111    123443333333332   122346999


Q ss_pred             EEEcCCC
Q 021960          110 LYNNAGV  116 (305)
Q Consensus       110 li~nag~  116 (305)
                      +|++++.
T Consensus       205 vi~~~~~  211 (271)
T cd05188         205 VIDAVGG  211 (271)
T ss_pred             EEECCCC
Confidence            9998873

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=96.01  E-value=0.037  Score=49.28  Aligned_cols=79  Identities=27%  Similarity=0.404  Sum_probs=51.9

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDI  109 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~  109 (305)
                      .+++++|+|+++++|..++..+...|++|+++.+++...+.+ ... +.+   ..++..+.+..+.+.+.. .. ..+|.
T Consensus       139 ~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~-g~~---~~~~~~~~~~~~~~~~~~-~~-~~~d~  211 (325)
T TIGR02824       139 AGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAAC-EAL-GAD---IAINYREEDFVEVVKAET-GG-KGVDV  211 (325)
T ss_pred             CCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc-CCc---EEEecCchhHHHHHHHHc-CC-CCeEE
Confidence            478999999999999999999999999999888876655544 222 111   112333333333332221 11 25999


Q ss_pred             EEEcCC
Q 021960          110 LYNNAG  115 (305)
Q Consensus       110 li~nag  115 (305)
                      +|+++|
T Consensus       212 ~i~~~~  217 (325)
T TIGR02824       212 ILDIVG  217 (325)
T ss_pred             EEECCc
Confidence            999877

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=95.99  E-value=0.028  Score=42.47  Aligned_cols=71  Identities=20%  Similarity=0.162  Sum_probs=51.7

Q ss_pred             EEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEEEEc
Q 021960           34 AIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILYNN  113 (305)
Q Consensus        34 vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~li~n  113 (305)
                      ++|.|. +.+|+.+++.|.+.+.+|+++++++...+.+.+..    +.++.+|.+|.+.++++-      ..+.+.+|..
T Consensus         1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~~~----~~~i~gd~~~~~~l~~a~------i~~a~~vv~~   69 (116)
T PF02254_consen    1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEELREEG----VEVIYGDATDPEVLERAG------IEKADAVVIL   69 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHTT----SEEEES-TTSHHHHHHTT------GGCESEEEEE
T ss_pred             eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHHHHhcc----cccccccchhhhHHhhcC------ccccCEEEEc
Confidence            567776 58999999999998879999999877765554332    778999999987776641      1256777765


Q ss_pred             CC
Q 021960          114 AG  115 (305)
Q Consensus       114 ag  115 (305)
                      ..
T Consensus        70 ~~   71 (116)
T PF02254_consen   70 TD   71 (116)
T ss_dssp             SS
T ss_pred             cC
Confidence            44

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=95.98  E-value=0.13  Score=46.47  Aligned_cols=113  Identities=15%  Similarity=0.193  Sum_probs=66.7

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCC--eEEEEecCcchhhhHhhhcCC-----CCeEEEEecCCCHHHHHHHHHHHHH
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGA--KVVIADVEDTLGSVLASTLAP-----APVTFVHCDVSLEEDIENLINSTVS  102 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~--~vv~~~r~~~~~~~~~~~~~~-----~~v~~~~~D~~d~~~i~~~~~~~~~  102 (305)
                      .++++.|+|+ |++|.+++..|+..|.  .++++++++.........+..     .++... .  .+.+.          
T Consensus         5 ~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~-~--~~~~~----------   70 (315)
T PRK00066          5 QHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIY-A--GDYSD----------   70 (315)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEE-e--CCHHH----------
Confidence            4679999998 9999999999999887  699999876654333222211     122221 1  22221          


Q ss_pred             hcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC-CCCEEEEecccc
Q 021960          103 RYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINR-GGGCIISTASVA  171 (305)
Q Consensus       103 ~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~isS~~  171 (305)
                       +..-|++|..||....       ...+..   ..+..|..-    ++.+...+.+. ..+.++++|-..
T Consensus        71 -~~~adivIitag~~~k-------~g~~R~---dll~~N~~i----~~~i~~~i~~~~~~~~vivvsNP~  125 (315)
T PRK00066         71 -CKDADLVVITAGAPQK-------PGETRL---DLVEKNLKI----FKSIVGEVMASGFDGIFLVASNPV  125 (315)
T ss_pred             -hCCCCEEEEecCCCCC-------CCCCHH---HHHHHHHHH----HHHHHHHHHHhCCCeEEEEccCcH
Confidence             2368999999997421       112333   334555544    34444444433 456777777433

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=95.98  E-value=0.035  Score=49.93  Aligned_cols=78  Identities=18%  Similarity=0.263  Sum_probs=51.7

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDI  109 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~  109 (305)
                      .|.++||+||+|++|..+++.+...|++|+.+.+++.+.+.+.+ +.-.  .  ..|..+.+..+. +++...  +.+|+
T Consensus       143 ~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~-~Ga~--~--vi~~~~~~~~~~-v~~~~~--~gvd~  214 (329)
T cd08294         143 AGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKE-LGFD--A--VFNYKTVSLEEA-LKEAAP--DGIDC  214 (329)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cCCC--E--EEeCCCccHHHH-HHHHCC--CCcEE
Confidence            57899999999999999888888899999888887766665544 3221  1  134443322222 222211  35899


Q ss_pred             EEEcCC
Q 021960          110 LYNNAG  115 (305)
Q Consensus       110 li~nag  115 (305)
                      ++.+.|
T Consensus       215 vld~~g  220 (329)
T cd08294         215 YFDNVG  220 (329)
T ss_pred             EEECCC
Confidence            998776

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>PRK05442 malate dehydrogenase; Provisional

Probab=95.93  E-value=0.051  Score=49.30  Aligned_cols=115  Identities=9%  Similarity=0.042  Sum_probs=65.8

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHcCC-------eEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHH----HHHHH
Q 021960           31 GKVAIITGGARGIGEAAVRLFARHGA-------KVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIE----NLINS   99 (305)
Q Consensus        31 ~k~vlVtGas~giG~~ia~~l~~~g~-------~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~----~~~~~   99 (305)
                      .+++.|+|++|.+|..++..|+..+.       .+++++.++....          ......|+.|.....    .+...
T Consensus         4 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~----------~~g~a~Dl~~~~~~~~~~~~i~~~   73 (326)
T PRK05442          4 PVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKA----------LEGVVMELDDCAFPLLAGVVITDD   73 (326)
T ss_pred             CcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccc----------cceeehhhhhhhhhhcCCcEEecC
Confidence            45889999999999999999988664       5888887542100          112223333321000    00011


Q ss_pred             HHHhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHc-C-CCCEEEEecc
Q 021960          100 TVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMIN-R-GGGCIISTAS  169 (305)
Q Consensus       100 ~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~-~~~~iv~isS  169 (305)
                      ..+....-|++|.+||....     +  ..+   -.+.+..|..    +++.+.+.+.+ . ..+.++++|-
T Consensus        74 ~y~~~~daDiVVitaG~~~k-----~--g~t---R~dll~~Na~----i~~~i~~~i~~~~~~~~iiivvsN  131 (326)
T PRK05442         74 PNVAFKDADVALLVGARPRG-----P--GME---RKDLLEANGA----IFTAQGKALNEVAARDVKVLVVGN  131 (326)
T ss_pred             hHHHhCCCCEEEEeCCCCCC-----C--CCc---HHHHHHHHHH----HHHHHHHHHHHhCCCCeEEEEeCC
Confidence            12333468999999996421     1  123   3344555654    45666666655 3 3567777774

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=95.90  E-value=0.051  Score=48.85  Aligned_cols=79  Identities=19%  Similarity=0.274  Sum_probs=52.3

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDI  109 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~  109 (305)
                      .+.++||.|+++++|.+++..+.+.|++|+.+.++..+.+.+.+...-.    ...|..+.+..+.+.+ ...  +.+|+
T Consensus       145 ~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~g~~----~~~~~~~~~~~~~v~~-~~~--~~~d~  217 (329)
T cd05288         145 PGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEELGFD----AAINYKTPDLAEALKE-AAP--DGIDV  217 (329)
T ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhcCCc----eEEecCChhHHHHHHH-hcc--CCceE
Confidence            5789999999999999999999999999998888776655544322211    1123333332222222 221  36999


Q ss_pred             EEEcCC
Q 021960          110 LYNNAG  115 (305)
Q Consensus       110 li~nag  115 (305)
                      ++.+.|
T Consensus       218 vi~~~g  223 (329)
T cd05288         218 YFDNVG  223 (329)
T ss_pred             EEEcch
Confidence            998876

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=95.90  E-value=0.13  Score=46.28  Aligned_cols=112  Identities=18%  Similarity=0.229  Sum_probs=64.1

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCC--eEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHH-----HHHHHhcC
Q 021960           33 VAIITGGARGIGEAAVRLFARHGA--KVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLI-----NSTVSRYG  105 (305)
Q Consensus        33 ~vlVtGas~giG~~ia~~l~~~g~--~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~-----~~~~~~~g  105 (305)
                      ++.|+|++|.+|.+++..|+.++.  .++++++++...              ...|+.+...-..+.     +...+.+.
T Consensus         1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~a~g--------------~a~DL~~~~~~~~i~~~~~~~~~~~~~~   66 (312)
T TIGR01772         1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAGAAG--------------VAADLSHIPTAASVKGFSGEEGLENALK   66 (312)
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCCCcE--------------EEchhhcCCcCceEEEecCCCchHHHcC
Confidence            368999999999999999998875  688898876221              222322211000000     00122334


Q ss_pred             CccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC-CCCEEEEeccccc
Q 021960          106 RLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINR-GGGCIISTASVAG  172 (305)
Q Consensus       106 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~isS~~~  172 (305)
                      .-|++|..||....     +  ..+   -.+.+..|..-    ++.+.+.+.+. +.+.++++|-...
T Consensus        67 daDivvitaG~~~~-----~--g~~---R~dll~~N~~I----~~~i~~~i~~~~p~~iiivvsNPvD  120 (312)
T TIGR01772        67 GADVVVIPAGVPRK-----P--GMT---RDDLFNVNAGI----VKDLVAAVAESCPKAMILVITNPVN  120 (312)
T ss_pred             CCCEEEEeCCCCCC-----C--Ccc---HHHHHHHhHHH----HHHHHHHHHHhCCCeEEEEecCchh
Confidence            68999999997421     1  122   23345566653    44444444433 4567777776553

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=95.85  E-value=0.29  Score=46.21  Aligned_cols=112  Identities=9%  Similarity=0.038  Sum_probs=67.5

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHc-------CC--eEEEEecCcchhhhHhhhcCCC------CeEEEEecCCCHHHHHH
Q 021960           31 GKVAIITGGARGIGEAAVRLFARH-------GA--KVVIADVEDTLGSVLASTLAPA------PVTFVHCDVSLEEDIEN   95 (305)
Q Consensus        31 ~k~vlVtGas~giG~~ia~~l~~~-------g~--~vv~~~r~~~~~~~~~~~~~~~------~v~~~~~D~~d~~~i~~   95 (305)
                      .-+|.|+|++|.+|.+++..|+..       +.  .+++++++++..+-....+...      ++.+ .  ..++     
T Consensus       100 ~~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i-~--~~~y-----  171 (444)
T PLN00112        100 LINVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSI-G--IDPY-----  171 (444)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEE-e--cCCH-----
Confidence            347899999999999999999987       65  5888888776654333222111      1111 1  1122     


Q ss_pred             HHHHHHHhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHc--CCCCEEEEeccc
Q 021960           96 LINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMIN--RGGGCIISTASV  170 (305)
Q Consensus        96 ~~~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~~~iv~isS~  170 (305)
                            +.+..-|++|..||....     +  ..+.   .+.++.|..-    ++.+.+.+.+  ...+.||++|--
T Consensus       172 ------e~~kdaDiVVitAG~prk-----p--G~tR---~dLl~~N~~I----~k~i~~~I~~~a~p~~ivIVVsNP  228 (444)
T PLN00112        172 ------EVFQDAEWALLIGAKPRG-----P--GMER---ADLLDINGQI----FAEQGKALNEVASRNVKVIVVGNP  228 (444)
T ss_pred             ------HHhCcCCEEEECCCCCCC-----C--CCCH---HHHHHHHHHH----HHHHHHHHHHhcCCCeEEEEcCCc
Confidence                  222468999999997421     1  1233   3345556543    4555566655  456777777743

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=95.77  E-value=0.13  Score=46.43  Aligned_cols=34  Identities=18%  Similarity=0.266  Sum_probs=29.7

Q ss_pred             CEEEEecCCCchHHHHHHHHHHcCCe--EEEEecCc
Q 021960           32 KVAIITGGARGIGEAAVRLFARHGAK--VVIADVED   65 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~g~~--vv~~~r~~   65 (305)
                      +++.|+|++|.+|..++..|+..|..  |+++++++
T Consensus         1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~   36 (309)
T cd05294           1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPK   36 (309)
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcc
Confidence            36899999999999999999999864  89999854

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=95.76  E-value=0.04  Score=49.31  Aligned_cols=42  Identities=17%  Similarity=0.218  Sum_probs=36.2

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhh
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSV   70 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~   70 (305)
                      .+.+++++|.|. |++|+.++..|...|++|.+++|+....+.
T Consensus       149 ~l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~  190 (296)
T PRK08306        149 TIHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHLAR  190 (296)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHH
Confidence            557899999997 789999999999999999999998655443

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=95.73  E-value=0.21  Score=45.58  Aligned_cols=42  Identities=26%  Similarity=0.442  Sum_probs=35.9

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHh
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLA   72 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~   72 (305)
                      .|++++|.|+ |++|..++..+...|++|+++++++.+.+.+.
T Consensus       166 ~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~~  207 (349)
T TIGR03201       166 KGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEMMK  207 (349)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHH
Confidence            4789999999 99999999888889999988888877766553

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.73  E-value=0.12  Score=49.41  Aligned_cols=77  Identities=21%  Similarity=0.149  Sum_probs=49.4

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcch-hhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCC
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTL-GSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGR  106 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~-~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~  106 (305)
                      .+.++.++|.|+ |++|.++|+.|+++|++|.++++++.. .....+.+....+.++..+-..             ....
T Consensus        13 ~~~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~~-------------~~~~   78 (480)
T PRK01438         13 DWQGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAILEALGATVRLGPGPT-------------LPED   78 (480)
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHcCCEEEECCCcc-------------ccCC
Confidence            346789999996 789999999999999999999865432 1111222222224443322111             0125


Q ss_pred             ccEEEEcCCCCC
Q 021960          107 LDILYNNAGVLG  118 (305)
Q Consensus       107 id~li~nag~~~  118 (305)
                      .|.||...|...
T Consensus        79 ~D~Vv~s~Gi~~   90 (480)
T PRK01438         79 TDLVVTSPGWRP   90 (480)
T ss_pred             CCEEEECCCcCC
Confidence            899999999753

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=95.71  E-value=0.043  Score=52.03  Aligned_cols=59  Identities=17%  Similarity=0.169  Sum_probs=43.4

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHH
Q 021960           33 VAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIEN   95 (305)
Q Consensus        33 ~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~   95 (305)
                      .++|.|+ |.+|.++++.|.++|+.|++++++....+.+.+.   ..+.++.+|.++...+++
T Consensus         2 ~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~~---~~~~~~~gd~~~~~~l~~   60 (453)
T PRK09496          2 KIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQDR---LDVRTVVGNGSSPDVLRE   60 (453)
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhh---cCEEEEEeCCCCHHHHHH
Confidence            5788887 9999999999999999999999987665544321   125566667766554443

>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown]

Probab=95.69  E-value=0.74  Score=40.59  Aligned_cols=180  Identities=13%  Similarity=0.068  Sum_probs=97.1

Q ss_pred             CCEEEEecCCCchHHHHHHHHH-HcCCeEEEEecCcch---------------hhhHhhhcCCCCeEEEEecCCCHHHHH
Q 021960           31 GKVAIITGGARGIGEAAVRLFA-RHGAKVVIADVEDTL---------------GSVLASTLAPAPVTFVHCDVSLEEDIE   94 (305)
Q Consensus        31 ~k~vlVtGas~giG~~ia~~l~-~~g~~vv~~~r~~~~---------------~~~~~~~~~~~~v~~~~~D~~d~~~i~   94 (305)
                      .|.|||.|+|+|.|++.-...+ -.|+.-+.+.-....               ....++. .+--..-+..|.-+.+--+
T Consensus        41 PKkVLviGaSsGyGLa~RIsaaFG~gAdTiGVffE~pgte~~~gtagwyn~~~f~~~A~~-kGlyAksingDaFS~e~k~  119 (398)
T COG3007          41 PKKVLVIGASSGYGLAARISAAFGPGADTIGVFFERPGTERKPGTAGWYNNAAFKKFAKQ-KGLYAKSINGDAFSDEMKQ  119 (398)
T ss_pred             CceEEEEecCCcccHHHHHHHHhCCCCceeeEEeecCCccCCCcchhhhHHHHHHHHHHh-cCceeeecccchhhHHHHH
Confidence            5899999999999987544433 145554443211110               1111111 1222345667877777778


Q ss_pred             HHHHHHHHhcCCccEEEEcCCCCCCCCC-C-----------------------------CcccCCCHHHHHHHHHHHhHH
Q 021960           95 NLINSTVSRYGRLDILYNNAGVLGNQRK-H-----------------------------KSIIDFDADEFDNVMRVNVKG  144 (305)
Q Consensus        95 ~~~~~~~~~~g~id~li~nag~~~~~~~-~-----------------------------~~~~~~~~~~~~~~~~~n~~~  144 (305)
                      .+++.+.+.+|++|.+|+.-+......+ .                             ..++..+.++++....+.=--
T Consensus       120 kvIe~Ik~~~g~vDlvvYSlAsp~Rk~pktgev~~SalKpIg~a~~~~~ldt~kd~i~e~~lepAseqEI~~Tv~VMGGe  199 (398)
T COG3007         120 KVIEAIKQDFGKVDLVVYSLASPRRKHPKTGEVFRSALKPIGEAVSGRTLDTEKDVIIEATLEPASEQEIADTVAVMGGE  199 (398)
T ss_pred             HHHHHHHHhhccccEEEEeccCccccCCCcchhhHhhhcchhhhccccccccccceeeeeecccccHHHHHHHHHhhCcc
Confidence            8899999999999999987553211000 0                             001111333333332221000


Q ss_pred             H-HHHHHHHHHHHHcCCCCEEEEecccccccCCC--CCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEe
Q 021960          145 M-ALGIKHAARVMINRGGGCIISTASVAGVMGGL--GPHAYTASKHAIVGLTKNAACELGRYGIRVNCIS  211 (305)
Q Consensus       145 ~-~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~--~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~  211 (305)
                      - -.+..+++..-.-..+.+.+-.|-+..-...+  -...-+.+|.=++.-++.+...++..+-..++..
T Consensus       200 DWq~WidaLl~advlaeg~kTiAfsYiG~~iT~~IYw~GtiG~AK~DLd~~~~~inekLa~~gG~A~vsV  269 (398)
T COG3007         200 DWQMWIDALLEADVLAEGAKTIAFSYIGEKITHPIYWDGTIGRAKKDLDQKSLAINEKLAALGGGARVSV  269 (398)
T ss_pred             hHHHHHHHHHhccccccCceEEEEEecCCccccceeeccccchhhhcHHHHHHHHHHHHHhcCCCeeeee
Confidence            0 01223332211113445566556555444332  2356799999999999999999887665555433

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=95.68  E-value=0.067  Score=48.82  Aligned_cols=37  Identities=32%  Similarity=0.590  Sum_probs=32.1

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCC-eEEEEecC
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGA-KVVIADVE   64 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~-~vv~~~r~   64 (305)
                      ..|..++|+|.|+ ||+|..+++.|+..|. ++.+++.+
T Consensus        20 ~~L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D   57 (339)
T PRK07688         20 QKLREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRD   57 (339)
T ss_pred             HHhcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            3667889999997 8999999999999998 78888765

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=95.66  E-value=0.15  Score=46.66  Aligned_cols=79  Identities=19%  Similarity=0.281  Sum_probs=50.4

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCe-EEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAK-VVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLD  108 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~-vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id  108 (305)
                      .|+++||.|+ |++|...+..+...|++ |+.+++++.+.+.+.+ +...    ..+|..+.+..+.+. +.... ..+|
T Consensus       176 ~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~~-~Ga~----~~i~~~~~~~~~~i~-~~~~~-~g~d  247 (358)
T TIGR03451       176 RGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVDIDDRKLEWARE-FGAT----HTVNSSGTDPVEAIR-ALTGG-FGAD  247 (358)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH-cCCc----eEEcCCCcCHHHHHH-HHhCC-CCCC
Confidence            4789999985 99999999888888985 8888888777665543 3221    123444432222222 12111 2489


Q ss_pred             EEEEcCCC
Q 021960          109 ILYNNAGV  116 (305)
Q Consensus       109 ~li~nag~  116 (305)
                      ++|.+.|.
T Consensus       248 ~vid~~g~  255 (358)
T TIGR03451       248 VVIDAVGR  255 (358)
T ss_pred             EEEECCCC
Confidence            99998873

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=95.64  E-value=0.049  Score=51.32  Aligned_cols=73  Identities=21%  Similarity=0.384  Sum_probs=50.6

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCC-eEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCC
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGA-KVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGR  106 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~-~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~  106 (305)
                      ++.+++++|.|+ |.+|..+++.|...|+ +|++++|+..+...+...+..        +..+.++..+.+       ..
T Consensus       179 ~~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~--------~~~~~~~~~~~l-------~~  242 (423)
T PRK00045        179 DLSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFGG--------EAIPLDELPEAL-------AE  242 (423)
T ss_pred             CccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCC--------cEeeHHHHHHHh-------cc
Confidence            467899999987 9999999999999997 788899987766555544321        111222332222       25


Q ss_pred             ccEEEEcCCC
Q 021960          107 LDILYNNAGV  116 (305)
Q Consensus       107 id~li~nag~  116 (305)
                      .|+||.+.|.
T Consensus       243 aDvVI~aT~s  252 (423)
T PRK00045        243 ADIVISSTGA  252 (423)
T ss_pred             CCEEEECCCC
Confidence            7888888764

>PLN00203 glutamyl-tRNA reductase

Probab=95.63  E-value=0.057  Score=52.03  Aligned_cols=76  Identities=11%  Similarity=0.295  Sum_probs=53.0

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCC-eEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCC
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGA-KVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGR  106 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~-~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~  106 (305)
                      ++.+++++|.|+ |.+|..+++.|...|+ +|+++.|+..+.+.+...+.+..+.+  .++   ++....+       ..
T Consensus       263 ~l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~~--~~~---~dl~~al-------~~  329 (519)
T PLN00203        263 SHASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEIIY--KPL---DEMLACA-------AE  329 (519)
T ss_pred             CCCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceEe--ecH---hhHHHHH-------hc
Confidence            377899999998 9999999999999997 69999999877766665543222222  122   2333332       25


Q ss_pred             ccEEEEcCCC
Q 021960          107 LDILYNNAGV  116 (305)
Q Consensus       107 id~li~nag~  116 (305)
                      .|+||.+.+.
T Consensus       330 aDVVIsAT~s  339 (519)
T PLN00203        330 ADVVFTSTSS  339 (519)
T ss_pred             CCEEEEccCC
Confidence            7899887654

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=95.61  E-value=0.2  Score=45.15  Aligned_cols=86  Identities=14%  Similarity=0.035  Sum_probs=55.2

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchh---------hhHhhhcCCCCeEEEEecCCCHHHHHHHH
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLG---------SVLASTLAPAPVTFVHCDVSLEEDIENLI   97 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~---------~~~~~~~~~~~v~~~~~D~~d~~~i~~~~   97 (305)
                      ..+.||++.|.| .|.||+.+++.|...|++|+..++.....         ..+.+.+...++..+.+.++  ++.+.++
T Consensus       132 ~~l~g~tvgIvG-~G~IG~~vA~~l~afG~~V~~~~~~~~~~~~~~~~~~~~~l~e~l~~aDvvv~~lPlt--~~T~~li  208 (312)
T PRK15469        132 YHREDFTIGILG-AGVLGSKVAQSLQTWGFPLRCWSRSRKSWPGVQSFAGREELSAFLSQTRVLINLLPNT--PETVGII  208 (312)
T ss_pred             CCcCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCCCCCCCceeecccccHHHHHhcCCEEEECCCCC--HHHHHHh
Confidence            467899999998 58999999999999999999988754321         11222334455555555444  3445554


Q ss_pred             HH-HHHhcCCccEEEEcCCC
Q 021960           98 NS-TVSRYGRLDILYNNAGV  116 (305)
Q Consensus        98 ~~-~~~~~g~id~li~nag~  116 (305)
                      .. ..+.. +.+.++.|.|-
T Consensus       209 ~~~~l~~m-k~ga~lIN~aR  227 (312)
T PRK15469        209 NQQLLEQL-PDGAYLLNLAR  227 (312)
T ss_pred             HHHHHhcC-CCCcEEEECCC
Confidence            42 33332 45666666664

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=95.61  E-value=0.23  Score=44.67  Aligned_cols=142  Identities=15%  Similarity=0.124  Sum_probs=76.2

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCC--eEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHH---HHHHH-H-HHHHHhcC
Q 021960           33 VAIITGGARGIGEAAVRLFARHGA--KVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEE---DIENL-I-NSTVSRYG  105 (305)
Q Consensus        33 ~vlVtGas~giG~~ia~~l~~~g~--~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~---~i~~~-~-~~~~~~~g  105 (305)
                      ++.|+|++|.+|.++|..|+..+.  .+++++.+ ....             ...|+.+..   .+... - +.+.+.+.
T Consensus         2 KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~-~a~g-------------~alDL~~~~~~~~i~~~~~~~~~y~~~~   67 (310)
T cd01337           2 KVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV-NTPG-------------VAADLSHINTPAKVTGYLGPEELKKALK   67 (310)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC-ccce-------------eehHhHhCCCcceEEEecCCCchHHhcC
Confidence            678999999999999999998884  68888886 2111             112222110   00000 0 00122334


Q ss_pred             CccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEeccccccc-----------
Q 021960          106 RLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVM-----------  174 (305)
Q Consensus       106 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~-----------  174 (305)
                      .-|++|.+||....     +  ..+   -...++.|..-.-.+.+.+.++   .+.+.++++|-.....           
T Consensus        68 daDivvitaG~~~k-----~--g~t---R~dll~~N~~i~~~i~~~i~~~---~p~a~vivvtNPvDv~~~i~t~~~~~~  134 (310)
T cd01337          68 GADVVVIPAGVPRK-----P--GMT---RDDLFNINAGIVRDLATAVAKA---CPKALILIISNPVNSTVPIAAEVLKKA  134 (310)
T ss_pred             CCCEEEEeCCCCCC-----C--CCC---HHHHHHHHHHHHHHHHHHHHHh---CCCeEEEEccCchhhHHHHHHHHHHHh
Confidence            68999999997421     1  123   3344566665543344444332   3457777777655221           


Q ss_pred             -CCCCCccchhhHHHHHHHHHHHHHHHC
Q 021960          175 -GGLGPHAYTASKHAIVGLTKNAACELG  201 (305)
Q Consensus       175 -~~~~~~~Y~~sKaa~~~~~~~la~e~~  201 (305)
                       +.+..-..|.+--=-..|-..+++++.
T Consensus       135 s~~p~~rviG~~~LDs~R~~~~la~~l~  162 (310)
T cd01337         135 GVYDPKRLFGVTTLDVVRANTFVAELLG  162 (310)
T ss_pred             cCCCHHHEEeeechHHHHHHHHHHHHhC
Confidence             233223444442222245556677664

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=95.60  E-value=0.065  Score=47.75  Aligned_cols=38  Identities=21%  Similarity=0.305  Sum_probs=32.4

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCC-eEEEEecCcc
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGA-KVVIADVEDT   66 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~-~vv~~~r~~~   66 (305)
                      ++++|+++|.|+ ||-+++++..|++.|+ ++.++.|+..
T Consensus       121 ~~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~  159 (288)
T PRK12749        121 DIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDE  159 (288)
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCcc
Confidence            457899999997 6779999999999997 6889999853

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=95.57  E-value=0.089  Score=45.19  Aligned_cols=34  Identities=26%  Similarity=0.554  Sum_probs=28.7

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCC-eEEEEe
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGA-KVVIAD   62 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~-~vv~~~   62 (305)
                      .+.+++|+|.|+ ||+|.++++.|+..|. ++.++|
T Consensus        18 ~L~~~~VlivG~-GglGs~va~~La~~Gvg~i~lvD   52 (228)
T cd00757          18 KLKNARVLVVGA-GGLGSPAAEYLAAAGVGKLGLVD   52 (228)
T ss_pred             HHhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEc
Confidence            567889999995 7999999999999998 466654

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>cd08230 glucose_DH Glucose dehydrogenase

Probab=95.54  E-value=0.17  Score=46.32  Aligned_cols=74  Identities=23%  Similarity=0.405  Sum_probs=47.6

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecC---cchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCC
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVE---DTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGR  106 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~---~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~  106 (305)
                      .|++++|+|+ |++|...+..+...|++|++++++   +.+.+.+. .+. .  ..  +|..+. ++.+ .    ...+.
T Consensus       172 ~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~~~~-~~G-a--~~--v~~~~~-~~~~-~----~~~~~  238 (355)
T cd08230         172 NPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRRDPPDPKADIVE-ELG-A--TY--VNSSKT-PVAE-V----KLVGE  238 (355)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHH-HcC-C--EE--ecCCcc-chhh-h----hhcCC
Confidence            5789999986 999999998888889999998884   44444333 332 2  22  243332 2222 1    11246


Q ss_pred             ccEEEEcCCC
Q 021960          107 LDILYNNAGV  116 (305)
Q Consensus       107 id~li~nag~  116 (305)
                      +|++|.+.|.
T Consensus       239 ~d~vid~~g~  248 (355)
T cd08230         239 FDLIIEATGV  248 (355)
T ss_pred             CCEEEECcCC
Confidence            9999999873

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=95.54  E-value=0.099  Score=48.63  Aligned_cols=73  Identities=21%  Similarity=0.349  Sum_probs=53.2

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCC-eEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCC
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGA-KVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGR  106 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~-~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~  106 (305)
                      ++.++++||.|| |-+|.-+|+.|+++|. .|+++.|+..+...+++.+.        .+....+.+...+.       .
T Consensus       175 ~L~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~--------~~~~~l~el~~~l~-------~  238 (414)
T COG0373         175 SLKDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLG--------AEAVALEELLEALA-------E  238 (414)
T ss_pred             ccccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhC--------CeeecHHHHHHhhh-------h
Confidence            478999999997 6899999999999995 68889999888777776653        22223333333332       5


Q ss_pred             ccEEEEcCCC
Q 021960          107 LDILYNNAGV  116 (305)
Q Consensus       107 id~li~nag~  116 (305)
                      .|+||.+-|.
T Consensus       239 ~DvVissTsa  248 (414)
T COG0373         239 ADVVISSTSA  248 (414)
T ss_pred             CCEEEEecCC
Confidence            6778777664

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=95.53  E-value=0.067  Score=47.64  Aligned_cols=79  Identities=20%  Similarity=0.325  Sum_probs=51.1

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDI  109 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~  109 (305)
                      ++++++|+|+++++|..++..+...|++++.+.++....+.+.+ . +. -.+  .|.......+.+.+.. . ...+|.
T Consensus       144 ~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~-g~-~~~--~~~~~~~~~~~~~~~~-~-~~~~d~  216 (328)
T cd08268         144 PGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDALLA-L-GA-AHV--IVTDEEDLVAEVLRIT-G-GKGVDV  216 (328)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHH-c-CC-CEE--EecCCccHHHHHHHHh-C-CCCceE
Confidence            47899999999999999999999999999988887665554432 2 11 112  2332222222222221 1 125999


Q ss_pred             EEEcCC
Q 021960          110 LYNNAG  115 (305)
Q Consensus       110 li~nag  115 (305)
                      ++++.|
T Consensus       217 vi~~~~  222 (328)
T cd08268         217 VFDPVG  222 (328)
T ss_pred             EEECCc
Confidence            999877

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PRK04148 hypothetical protein; Provisional

Probab=95.53  E-value=0.028  Score=43.86  Aligned_cols=55  Identities=11%  Similarity=0.057  Sum_probs=43.8

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCH
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLE   90 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~   90 (305)
                      +++.+++.|.+  .|.++|..|++.|+.|+.++.++...+...+.    .+.++..|+.+.
T Consensus        16 ~~~kileIG~G--fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~~----~~~~v~dDlf~p   70 (134)
T PRK04148         16 KNKKIVELGIG--FYFKVAKKLKESGFDVIVIDINEKAVEKAKKL----GLNAFVDDLFNP   70 (134)
T ss_pred             cCCEEEEEEec--CCHHHHHHHHHCCCEEEEEECCHHHHHHHHHh----CCeEEECcCCCC
Confidence            45789999975  78899999999999999999998866555433    267788888753

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=95.51  E-value=0.16  Score=39.69  Aligned_cols=76  Identities=24%  Similarity=0.370  Sum_probs=47.2

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHcCC-eEEEEecCcc-------------------hhhhHhh----hcCCCCeEEEEec
Q 021960           31 GKVAIITGGARGIGEAAVRLFARHGA-KVVIADVEDT-------------------LGSVLAS----TLAPAPVTFVHCD   86 (305)
Q Consensus        31 ~k~vlVtGas~giG~~ia~~l~~~g~-~vv~~~r~~~-------------------~~~~~~~----~~~~~~v~~~~~D   86 (305)
                      .++++|.|+ |++|..+++.|+..|. ++.+++.+.-                   +.+.+++    ..+..++..+..+
T Consensus         2 ~~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~   80 (135)
T PF00899_consen    2 NKRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEK   80 (135)
T ss_dssp             T-EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESH
T ss_pred             CCEEEEECc-CHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeecc
Confidence            468899986 7999999999999998 5777653311                   1111111    1134456666666


Q ss_pred             CCCHHHHHHHHHHHHHhcCCccEEEEcCC
Q 021960           87 VSLEEDIENLINSTVSRYGRLDILYNNAG  115 (305)
Q Consensus        87 ~~d~~~i~~~~~~~~~~~g~id~li~nag  115 (305)
                      + +.+...++++       ..|++|.+..
T Consensus        81 ~-~~~~~~~~~~-------~~d~vi~~~d  101 (135)
T PF00899_consen   81 I-DEENIEELLK-------DYDIVIDCVD  101 (135)
T ss_dssp             C-SHHHHHHHHH-------TSSEEEEESS
T ss_pred             c-cccccccccc-------CCCEEEEecC
Confidence            7 3444555442       5788887644

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=95.49  E-value=0.11  Score=45.13  Aligned_cols=36  Identities=25%  Similarity=0.475  Sum_probs=30.3

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCC-eEEEEec
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGA-KVVIADV   63 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~-~vv~~~r   63 (305)
                      ..+++++|+|.|+ ||+|..+++.|+..|. ++.+++.
T Consensus        28 ~~L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~   64 (245)
T PRK05690         28 EKLKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDF   64 (245)
T ss_pred             HHhcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC
Confidence            3567889999998 8999999999999997 5666654

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=95.43  E-value=0.27  Score=45.31  Aligned_cols=78  Identities=21%  Similarity=0.322  Sum_probs=50.0

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCC-eEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGA-KVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLD  108 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~-~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id  108 (305)
                      .|++|||.|+ |++|..++..+...|+ .|+++++++.+.+.+.+ +...    ..+|..+.+..+.+ .+...  +.+|
T Consensus       191 ~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a~~-~Ga~----~~i~~~~~~~~~~i-~~~~~--~g~d  261 (371)
T cd08281         191 PGQSVAVVGL-GGVGLSALLGAVAAGASQVVAVDLNEDKLALARE-LGAT----ATVNAGDPNAVEQV-RELTG--GGVD  261 (371)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHH-cCCc----eEeCCCchhHHHHH-HHHhC--CCCC
Confidence            4789999985 8999998888888899 58888888777665533 2211    12344443222222 22211  2589


Q ss_pred             EEEEcCCC
Q 021960          109 ILYNNAGV  116 (305)
Q Consensus       109 ~li~nag~  116 (305)
                      ++|.+.|.
T Consensus       262 ~vid~~G~  269 (371)
T cd08281         262 YAFEMAGS  269 (371)
T ss_pred             EEEECCCC
Confidence            99998874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>PLN02928 oxidoreductase family protein

Probab=95.39  E-value=0.18  Score=46.17  Aligned_cols=38  Identities=24%  Similarity=0.289  Sum_probs=34.5

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecC
Q 021960           26 HRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVE   64 (305)
Q Consensus        26 ~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~   64 (305)
                      ...+.||++.|.|- |.||+.+|+.|...|++|+..+|+
T Consensus       154 ~~~l~gktvGIiG~-G~IG~~vA~~l~afG~~V~~~dr~  191 (347)
T PLN02928        154 GDTLFGKTVFILGY-GAIGIELAKRLRPFGVKLLATRRS  191 (347)
T ss_pred             ccCCCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCC
Confidence            34789999999995 899999999999999999999886

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=95.33  E-value=0.23  Score=43.85  Aligned_cols=77  Identities=18%  Similarity=0.221  Sum_probs=47.5

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCe-EEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAK-VVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLD  108 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~-vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id  108 (305)
                      .++++||.|+ |++|...+..+...|++ |+++++++.+.+...+ +...    ..+|..+.   .+.+.+.... ..+|
T Consensus       120 ~g~~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~~~a~~-~Ga~----~~i~~~~~---~~~~~~~~~~-~g~d  189 (280)
T TIGR03366       120 KGRRVLVVGA-GMLGLTAAAAAAAAGAARVVAADPSPDRRELALS-FGAT----ALAEPEVL---AERQGGLQNG-RGVD  189 (280)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-cCCc----EecCchhh---HHHHHHHhCC-CCCC
Confidence            5889999986 89999998888888997 7777777666554433 2211    11232221   1222222111 2489


Q ss_pred             EEEEcCCC
Q 021960          109 ILYNNAGV  116 (305)
Q Consensus       109 ~li~nag~  116 (305)
                      ++|.+.|.
T Consensus       190 ~vid~~G~  197 (280)
T TIGR03366       190 VALEFSGA  197 (280)
T ss_pred             EEEECCCC
Confidence            99998873

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=95.31  E-value=0.08  Score=49.79  Aligned_cols=73  Identities=30%  Similarity=0.466  Sum_probs=51.0

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcC-CeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCC
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHG-AKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGR  106 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g-~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~  106 (305)
                      .+.+++++|.|+ |.+|..+++.|...| .+|++++|+..+...+.+.+..   ..+  +   .+++.+.+.       .
T Consensus       177 ~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~---~~i--~---~~~l~~~l~-------~  240 (417)
T TIGR01035       177 SLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGG---EAV--K---FEDLEEYLA-------E  240 (417)
T ss_pred             CccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCC---eEe--e---HHHHHHHHh-------h
Confidence            467899999997 999999999999999 6799999987665545444321   112  1   223333332       5


Q ss_pred             ccEEEEcCCC
Q 021960          107 LDILYNNAGV  116 (305)
Q Consensus       107 id~li~nag~  116 (305)
                      .|+||.+.+.
T Consensus       241 aDvVi~aT~s  250 (417)
T TIGR01035       241 ADIVISSTGA  250 (417)
T ss_pred             CCEEEECCCC
Confidence            7999988664

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.29  E-value=0.065  Score=47.60  Aligned_cols=38  Identities=24%  Similarity=0.372  Sum_probs=33.6

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecC
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVE   64 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~   64 (305)
                      ..++||.++|.|+++-.|+.++..|.++|++|.++.|+
T Consensus       155 i~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~  192 (283)
T PRK14192        155 IELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSR  192 (283)
T ss_pred             CCCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCC
Confidence            36789999999998779999999999999999888763

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=95.28  E-value=0.067  Score=41.48  Aligned_cols=85  Identities=21%  Similarity=0.249  Sum_probs=51.7

Q ss_pred             CEEEEecCCCchHHHHHHHHHHcCCeEEEE-ecCcchhhhHhhhcCC----------CCeEEEEecCCCHHHHHHHHHHH
Q 021960           32 KVAIITGGARGIGEAAVRLFARHGAKVVIA-DVEDTLGSVLASTLAP----------APVTFVHCDVSLEEDIENLINST  100 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~g~~vv~~-~r~~~~~~~~~~~~~~----------~~v~~~~~D~~d~~~i~~~~~~~  100 (305)
                      -++-|.|+ |.+|.++++.|.+.|+.|..+ +|+....+........          .+...+.+-+.| +.|..+++++
T Consensus        11 l~I~iIGa-GrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~~~~~~~aDlv~iavpD-daI~~va~~L   88 (127)
T PF10727_consen   11 LKIGIIGA-GRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDLEEILRDADLVFIAVPD-DAIAEVAEQL   88 (127)
T ss_dssp             -EEEEECT-SCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----TTGGGCC-SEEEE-S-C-CHHHHHHHHH
T ss_pred             cEEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCCcccccccccccccccccccccccccCCEEEEEech-HHHHHHHHHH
Confidence            37888997 899999999999999998766 4555444444333211          123344455556 4888888888


Q ss_pred             HHh--cCCccEEEEcCCCCC
Q 021960          101 VSR--YGRLDILYNNAGVLG  118 (305)
Q Consensus       101 ~~~--~g~id~li~nag~~~  118 (305)
                      ...  ..+=.+|||+.|...
T Consensus        89 a~~~~~~~g~iVvHtSGa~~  108 (127)
T PF10727_consen   89 AQYGAWRPGQIVVHTSGALG  108 (127)
T ss_dssp             HCC--S-TT-EEEES-SS--
T ss_pred             HHhccCCCCcEEEECCCCCh
Confidence            754  222358999999753

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=95.26  E-value=0.078  Score=55.00  Aligned_cols=76  Identities=16%  Similarity=0.183  Sum_probs=58.0

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHcC-Ce-------------EEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHH
Q 021960           31 GKVAIITGGARGIGEAAVRLFARHG-AK-------------VVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENL   96 (305)
Q Consensus        31 ~k~vlVtGas~giG~~ia~~l~~~g-~~-------------vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~   96 (305)
                      .|.|+|.|+ |.+|+..++.|++.. +.             |.+++++....+.+.+...  ++..+.+|++|.+++.++
T Consensus       569 ~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~--~~~~v~lDv~D~e~L~~~  645 (1042)
T PLN02819        569 SQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIE--NAEAVQLDVSDSESLLKY  645 (1042)
T ss_pred             CCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhcC--CCceEEeecCCHHHHHHh
Confidence            578999997 899999999998753 33             7778887666555544332  366789999999888777


Q ss_pred             HHHHHHhcCCccEEEEcCCC
Q 021960           97 INSTVSRYGRLDILYNNAGV  116 (305)
Q Consensus        97 ~~~~~~~~g~id~li~nag~  116 (305)
                      ++       .+|+||++...
T Consensus       646 v~-------~~DaVIsalP~  658 (1042)
T PLN02819        646 VS-------QVDVVISLLPA  658 (1042)
T ss_pred             hc-------CCCEEEECCCc
Confidence            65       58999988764

>PRK08410 2-hydroxyacid dehydrogenase; Provisional

Probab=95.23  E-value=0.18  Score=45.43  Aligned_cols=62  Identities=23%  Similarity=0.254  Sum_probs=44.4

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchh------hhHhhhcCCCCeEEEEecCCC
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLG------SVLASTLAPAPVTFVHCDVSL   89 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~------~~~~~~~~~~~v~~~~~D~~d   89 (305)
                      ..+.||++.|.|- |.||+++|+.+...|++|+..++.....      ..+.+.+...++..+.+-+++
T Consensus       141 ~~L~gktvGIiG~-G~IG~~vA~~~~~fgm~V~~~d~~~~~~~~~~~~~~l~ell~~sDvv~lh~Plt~  208 (311)
T PRK08410        141 GEIKGKKWGIIGL-GTIGKRVAKIAQAFGAKVVYYSTSGKNKNEEYERVSLEELLKTSDIISIHAPLNE  208 (311)
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHhhcCCEEEEECCCccccccCceeecHHHHhhcCCEEEEeCCCCc
Confidence            4789999999994 8999999999999999999988753211      112233344556666666654

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=95.23  E-value=0.2  Score=45.47  Aligned_cols=34  Identities=21%  Similarity=0.188  Sum_probs=29.3

Q ss_pred             CEEEEecCCCchHHHHHHHHHHcCC-------eEEEEecCc
Q 021960           32 KVAIITGGARGIGEAAVRLFARHGA-------KVVIADVED   65 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~g~-------~vv~~~r~~   65 (305)
                      -++.|+|++|.+|.+++..|+..+.       .+++++..+
T Consensus         4 ~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~   44 (323)
T TIGR01759         4 VRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPP   44 (323)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCC
Confidence            3789999999999999999998874       688888854

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=95.21  E-value=0.09  Score=47.42  Aligned_cols=72  Identities=26%  Similarity=0.427  Sum_probs=50.5

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHcC-CeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 021960           29 LEGKVAIITGGARGIGEAAVRLFARHG-AKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRL  107 (305)
Q Consensus        29 l~~k~vlVtGas~giG~~ia~~l~~~g-~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~i  107 (305)
                      +.+++++|.|+ |.+|..+++.|...| .+|++++|+..+...+.+.+..   ..+     +.+++.+.+       ...
T Consensus       176 l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g~---~~~-----~~~~~~~~l-------~~a  239 (311)
T cd05213         176 LKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKELGG---NAV-----PLDELLELL-------NEA  239 (311)
T ss_pred             ccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcCC---eEE-----eHHHHHHHH-------hcC
Confidence            67899999997 999999999999876 4688899987766555555432   111     223333332       247


Q ss_pred             cEEEEcCCC
Q 021960          108 DILYNNAGV  116 (305)
Q Consensus       108 d~li~nag~  116 (305)
                      |+||.+.+.
T Consensus       240 DvVi~at~~  248 (311)
T cd05213         240 DVVISATGA  248 (311)
T ss_pred             CEEEECCCC
Confidence            999998774

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=95.19  E-value=0.097  Score=46.81  Aligned_cols=79  Identities=23%  Similarity=0.329  Sum_probs=52.2

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDI  109 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~  109 (305)
                      .+.+++|+|+++++|..++..+...|++|+.+.+++...+.+.+ .. .. .  ..|..+.+..+.+.+ ... ...+|.
T Consensus       142 ~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~~~-~g-~~-~--~~~~~~~~~~~~~~~-~~~-~~~~d~  214 (324)
T cd08244         142 PGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALVRA-LG-AD-V--AVDYTRPDWPDQVRE-ALG-GGGVTV  214 (324)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cC-CC-E--EEecCCccHHHHHHH-HcC-CCCceE
Confidence            47899999999999999999999999999988887766655532 22 11 1  234444333333222 111 124999


Q ss_pred             EEEcCC
Q 021960          110 LYNNAG  115 (305)
Q Consensus       110 li~nag  115 (305)
                      ++.+.|
T Consensus       215 vl~~~g  220 (324)
T cd08244         215 VLDGVG  220 (324)
T ss_pred             EEECCC
Confidence            999876

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=95.19  E-value=0.36  Score=43.89  Aligned_cols=86  Identities=16%  Similarity=0.249  Sum_probs=55.2

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhh-------hHhhhcCCCCeEEEEecCCCHHHHHHHH-H
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGS-------VLASTLAPAPVTFVHCDVSLEEDIENLI-N   98 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~-------~~~~~~~~~~v~~~~~D~~d~~~i~~~~-~   98 (305)
                      ..+.|+++.|.|. |.||+++|+.|...|++|+..+++.....       .+.+.+...++.++.+-++.  +...++ +
T Consensus       142 ~~l~g~~VgIIG~-G~IG~~vA~~L~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell~~aDiVil~lP~t~--~t~~li~~  218 (330)
T PRK12480        142 KPVKNMTVAIIGT-GRIGAATAKIYAGFGATITAYDAYPNKDLDFLTYKDSVKEAIKDADIISLHVPANK--ESYHLFDK  218 (330)
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCChhHhhhhhhccCCHHHHHhcCCEEEEeCCCcH--HHHHHHhH
Confidence            4789999999985 88999999999999999999988754321       12222344556666565543  223333 3


Q ss_pred             HHHHhcCCccEEEEcCCC
Q 021960           99 STVSRYGRLDILYNNAGV  116 (305)
Q Consensus        99 ~~~~~~g~id~li~nag~  116 (305)
                      ...+.. +.+.++.|.+-
T Consensus       219 ~~l~~m-k~gavlIN~aR  235 (330)
T PRK12480        219 AMFDHV-KKGAILVNAAR  235 (330)
T ss_pred             HHHhcC-CCCcEEEEcCC
Confidence            333332 45666666664

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=95.15  E-value=0.1  Score=47.36  Aligned_cols=78  Identities=15%  Similarity=0.215  Sum_probs=51.3

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCe-EEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAK-VVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLD  108 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~-vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id  108 (305)
                      .|+++||+|+ |++|...+..+...|++ |+++++++.+.+.+.+ +...    ..+|..+.+ .+.+.+ .... ..+|
T Consensus       163 ~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~-~ga~----~~i~~~~~~-~~~~~~-~~~~-~~~d  233 (339)
T cd08239         163 GRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLELAKA-LGAD----FVINSGQDD-VQEIRE-LTSG-AGAD  233 (339)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-hCCC----EEEcCCcch-HHHHHH-HhCC-CCCC
Confidence            4889999986 89999999988889998 8888887776655433 3211    223444433 333322 2111 2599


Q ss_pred             EEEEcCCC
Q 021960          109 ILYNNAGV  116 (305)
Q Consensus       109 ~li~nag~  116 (305)
                      ++|.+.|.
T Consensus       234 ~vid~~g~  241 (339)
T cd08239         234 VAIECSGN  241 (339)
T ss_pred             EEEECCCC
Confidence            99998873

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=95.10  E-value=0.13  Score=47.65  Aligned_cols=36  Identities=28%  Similarity=0.450  Sum_probs=30.5

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCC-eEEEEecC
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGA-KVVIADVE   64 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~-~vv~~~r~   64 (305)
                      .+.+++|+|.|+ ||+|..+++.|+..|. ++.+++++
T Consensus       132 ~l~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d  168 (376)
T PRK08762        132 RLLEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHD  168 (376)
T ss_pred             HHhcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            456888999975 8999999999999998 58887765

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=95.10  E-value=0.076  Score=44.85  Aligned_cols=59  Identities=22%  Similarity=0.344  Sum_probs=42.4

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCC
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVS   88 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~   88 (305)
                      .+++||.+||.|| |.+|..-++.|++.|++|.+++.+..  ..+.+.....++.++.-+..
T Consensus         5 l~l~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~~--~~l~~l~~~~~i~~~~~~~~   63 (205)
T TIGR01470         5 ANLEGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEELE--SELTLLAEQGGITWLARCFD   63 (205)
T ss_pred             EEcCCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCCC--HHHHHHHHcCCEEEEeCCCC
Confidence            4688999999997 78999999999999999999876543  12222222235666666654

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]

Probab=95.08  E-value=0.25  Score=44.82  Aligned_cols=89  Identities=26%  Similarity=0.332  Sum_probs=56.7

Q ss_pred             CCCCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhh---------HhhhcCCCCeEEEEecCCCHHHHH
Q 021960           24 PSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSV---------LASTLAPAPVTFVHCDVSLEEDIE   94 (305)
Q Consensus        24 ~~~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~---------~~~~~~~~~v~~~~~D~~d~~~i~   94 (305)
                      +...++.||++-|.| .|.||+++|+.+...|++|+..+|+.....+         +.+.+...++..+.|-++..  -+
T Consensus       139 ~~~~~l~gktvGIiG-~GrIG~avA~r~~~Fgm~v~y~~~~~~~~~~~~~~~~y~~l~ell~~sDii~l~~Plt~~--T~  215 (324)
T COG1052         139 LLGFDLRGKTLGIIG-LGRIGQAVARRLKGFGMKVLYYDRSPNPEAEKELGARYVDLDELLAESDIISLHCPLTPE--TR  215 (324)
T ss_pred             ccccCCCCCEEEEEC-CCHHHHHHHHHHhcCCCEEEEECCCCChHHHhhcCceeccHHHHHHhCCEEEEeCCCChH--Hh
Confidence            344588999999999 5899999999999999999999887641111         12223345576777766642  23


Q ss_pred             HHHHH-HHHhcCCccEEEEcCCC
Q 021960           95 NLINS-TVSRYGRLDILYNNAGV  116 (305)
Q Consensus        95 ~~~~~-~~~~~g~id~li~nag~  116 (305)
                      .++.+ ..+.. +...++-|.|-
T Consensus       216 hLin~~~l~~m-k~ga~lVNtaR  237 (324)
T COG1052         216 HLINAEELAKM-KPGAILVNTAR  237 (324)
T ss_pred             hhcCHHHHHhC-CCCeEEEECCC
Confidence            33322 22222 45555556554

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=95.07  E-value=0.27  Score=37.91  Aligned_cols=79  Identities=18%  Similarity=0.257  Sum_probs=52.2

Q ss_pred             EEEEecCCCchHHHHHHHHHH-cCCeEEE-EecCcc--hh-----------------hhHhhhcCCCCeEEEEecCCCHH
Q 021960           33 VAIITGGARGIGEAAVRLFAR-HGAKVVI-ADVEDT--LG-----------------SVLASTLAPAPVTFVHCDVSLEE   91 (305)
Q Consensus        33 ~vlVtGas~giG~~ia~~l~~-~g~~vv~-~~r~~~--~~-----------------~~~~~~~~~~~v~~~~~D~~d~~   91 (305)
                      .++|.|++|..|+.+++.+.+ .++.++. ++++..  ..                 ..+.+.+...+   +.+|++.++
T Consensus         2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~~l~~~~~~~D---VvIDfT~p~   78 (124)
T PF01113_consen    2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVTDDLEELLEEAD---VVIDFTNPD   78 (124)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEBS-HHHHTTH-S---EEEEES-HH
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccchhHHHhcccCC---EEEEcCChH
Confidence            589999999999999999998 6777654 455540  00                 11111111122   567999999


Q ss_pred             HHHHHHHHHHHhcCCccEEEEcCCC
Q 021960           92 DIENLINSTVSRYGRLDILYNNAGV  116 (305)
Q Consensus        92 ~i~~~~~~~~~~~g~id~li~nag~  116 (305)
                      .+...++...+.  ++..|+-..|.
T Consensus        79 ~~~~~~~~~~~~--g~~~ViGTTG~  101 (124)
T PF01113_consen   79 AVYDNLEYALKH--GVPLVIGTTGF  101 (124)
T ss_dssp             HHHHHHHHHHHH--T-EEEEE-SSS
T ss_pred             HhHHHHHHHHhC--CCCEEEECCCC
Confidence            999998887766  57788888775

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>PRK11790 D-3-phosphoglycerate dehydrogenase; Provisional

Probab=95.07  E-value=0.25  Score=46.33  Aligned_cols=105  Identities=23%  Similarity=0.253  Sum_probs=64.9

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchh-------hhHhhhcCCCCeEEEEecCCCHHHHHHHHH
Q 021960           26 HRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLG-------SVLASTLAPAPVTFVHCDVSLEEDIENLIN   98 (305)
Q Consensus        26 ~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~-------~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~   98 (305)
                      ...+.||++.|.|- |.||+.+|+.+...|++|+..++.....       ..+.+.+...++..+.+-+++  +-+.++.
T Consensus       146 ~~~L~gktvGIiG~-G~IG~~vA~~~~~fGm~V~~~d~~~~~~~~~~~~~~~l~ell~~sDiVslh~Plt~--~T~~li~  222 (409)
T PRK11790        146 SFEVRGKTLGIVGY-GHIGTQLSVLAESLGMRVYFYDIEDKLPLGNARQVGSLEELLAQSDVVSLHVPETP--STKNMIG  222 (409)
T ss_pred             cccCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCcccccCCceecCCHHHHHhhCCEEEEcCCCCh--HHhhccC
Confidence            35789999999995 8999999999999999999988753211       123333345566666666653  3344443


Q ss_pred             H-HHHhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhH
Q 021960           99 S-TVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVK  143 (305)
Q Consensus        99 ~-~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~  143 (305)
                      + ..+.. +.+.++.|.+....         .+.+.+.+.++.+-.
T Consensus       223 ~~~l~~m-k~ga~lIN~aRG~~---------vde~aL~~aL~~g~i  258 (409)
T PRK11790        223 AEELALM-KPGAILINASRGTV---------VDIDALADALKSGHL  258 (409)
T ss_pred             HHHHhcC-CCCeEEEECCCCcc---------cCHHHHHHHHHcCCc
Confidence            2 22222 45666666654321         355666555555443

>PRK14968 putative methyltransferase; Provisional

Probab=95.06  E-value=0.29  Score=40.15  Aligned_cols=75  Identities=20%  Similarity=0.262  Sum_probs=49.0

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc-----CCCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL-----APAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~-----~~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      +++++|-.|++.|.   ++..+++++.+|+.+++++...+...+..     .+..+.++.+|+.+.     +    .+  
T Consensus        23 ~~~~vLd~G~G~G~---~~~~l~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~-----~----~~--   88 (188)
T PRK14968         23 KGDRVLEVGTGSGI---VAIVAAKNGKKVVGVDINPYAVECAKCNAKLNNIRNNGVEVIRSDLFEP-----F----RG--   88 (188)
T ss_pred             CCCEEEEEccccCH---HHHHHHhhcceEEEEECCHHHHHHHHHHHHHcCCCCcceEEEecccccc-----c----cc--
Confidence            56788888877665   55556666889999999876655443332     111277888887541     1    11  


Q ss_pred             CCccEEEEcCCCCC
Q 021960          105 GRLDILYNNAGVLG  118 (305)
Q Consensus       105 g~id~li~nag~~~  118 (305)
                      ..+|.|+.|..+..
T Consensus        89 ~~~d~vi~n~p~~~  102 (188)
T PRK14968         89 DKFDVILFNPPYLP  102 (188)
T ss_pred             cCceEEEECCCcCC
Confidence            26899999987643

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=95.04  E-value=0.074  Score=44.80  Aligned_cols=38  Identities=24%  Similarity=0.353  Sum_probs=33.9

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecC
Q 021960           26 HRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVE   64 (305)
Q Consensus        26 ~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~   64 (305)
                      ..+++||.+||.|| |.+|...++.|.+.|++|++++++
T Consensus         5 ~l~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~   42 (202)
T PRK06718          5 MIDLSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPE   42 (202)
T ss_pred             EEEcCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCC
Confidence            34789999999997 899999999999999999988764

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=95.01  E-value=0.15  Score=46.98  Aligned_cols=79  Identities=18%  Similarity=0.263  Sum_probs=51.5

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCC-eEEEEecCcchhhhHhhhcCCCCeEEEEecCCC-HHHHHHHHHHHHHhcCCc
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGA-KVVIADVEDTLGSVLASTLAPAPVTFVHCDVSL-EEDIENLINSTVSRYGRL  107 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~-~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d-~~~i~~~~~~~~~~~g~i  107 (305)
                      .|.++||+|+ |+||...+..+...|+ +|+.+++++.+.+.+.+ +...    ..+|..+ .+++.+.+.++..  +.+
T Consensus       185 ~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~~-~Ga~----~~i~~~~~~~~~~~~v~~~~~--~g~  256 (368)
T TIGR02818       185 EGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAKFELAKK-LGAT----DCVNPNDYDKPIQEVIVEITD--GGV  256 (368)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH-hCCC----eEEcccccchhHHHHHHHHhC--CCC
Confidence            4789999985 8999999888888898 68888888776665533 2211    1234432 2233333333322  369


Q ss_pred             cEEEEcCCC
Q 021960          108 DILYNNAGV  116 (305)
Q Consensus       108 d~li~nag~  116 (305)
                      |++|.+.|.
T Consensus       257 d~vid~~G~  265 (368)
T TIGR02818       257 DYSFECIGN  265 (368)
T ss_pred             CEEEECCCC
Confidence            999999883

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.00  E-value=0.1  Score=46.29  Aligned_cols=37  Identities=30%  Similarity=0.496  Sum_probs=34.1

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecC
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVE   64 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~   64 (305)
                      .++||.++|+|.|.-+|+.++..|.++|++|.++.++
T Consensus       155 ~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~  191 (286)
T PRK14175        155 DLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSR  191 (286)
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCC
Confidence            6789999999999889999999999999999988764

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=95.00  E-value=0.053  Score=44.65  Aligned_cols=46  Identities=28%  Similarity=0.277  Sum_probs=37.9

Q ss_pred             CCCCCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhh
Q 021960           23 PPSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGS   69 (305)
Q Consensus        23 ~~~~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~   69 (305)
                      ......+.|+++.|.|. |.||+++|+.|...|++|+..+|......
T Consensus        28 ~~~~~~l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~~~   73 (178)
T PF02826_consen   28 RFPGRELRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKPEE   73 (178)
T ss_dssp             TTTBS-STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHHHH
T ss_pred             CCCccccCCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCChhh
Confidence            34455889999999985 89999999999999999999999876544

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=94.95  E-value=0.14  Score=47.90  Aligned_cols=85  Identities=16%  Similarity=0.206  Sum_probs=51.0

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCC---eEEEEecCcchhhhHhhhcCCC----CeEEEEecCCCHHHHHHHHHHHHH
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGA---KVVIADVEDTLGSVLASTLAPA----PVTFVHCDVSLEEDIENLINSTVS  102 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~---~vv~~~r~~~~~~~~~~~~~~~----~v~~~~~D~~d~~~i~~~~~~~~~  102 (305)
                      .|.+++|.|++|++|...+..+...|+   +|+++++++.+.+...+.....    .......|..+.++..+.+.++..
T Consensus       175 ~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~v~~~t~  254 (410)
T cd08238         175 PGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQRLFPPEAASRGIELLYVNPATIDDLHATLMELTG  254 (410)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHHhccccccccCceEEEECCCccccHHHHHHHHhC
Confidence            468999999999999998877666654   6888888887766554432100    011122344332233333332221


Q ss_pred             hcCCccEEEEcCC
Q 021960          103 RYGRLDILYNNAG  115 (305)
Q Consensus       103 ~~g~id~li~nag  115 (305)
                      . ..+|.+|.+.|
T Consensus       255 g-~g~D~vid~~g  266 (410)
T cd08238         255 G-QGFDDVFVFVP  266 (410)
T ss_pred             C-CCCCEEEEcCC
Confidence            1 24899998876

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=94.95  E-value=0.43  Score=43.63  Aligned_cols=42  Identities=24%  Similarity=0.298  Sum_probs=34.6

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCC-eEEEEecCcchhhhHh
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGA-KVVIADVEDTLGSVLA   72 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~-~vv~~~r~~~~~~~~~   72 (305)
                      .++++||+| +|++|..++..+...|+ +|+++++++.+.+.+.
T Consensus       177 ~g~~vlI~g-~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~~  219 (361)
T cd08231         177 AGDTVVVQG-AGPLGLYAVAAAKLAGARRVIVIDGSPERLELAR  219 (361)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH
Confidence            578999997 59999999988888999 8888888776665543

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=94.95  E-value=0.16  Score=43.19  Aligned_cols=37  Identities=24%  Similarity=0.437  Sum_probs=31.4

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCe-EEEEecC
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAK-VVIADVE   64 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~-vv~~~r~   64 (305)
                      ..+..++|+|.|+ ||+|..+++.|+..|.. +.+++.+
T Consensus        24 ~~L~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D   61 (212)
T PRK08644         24 EKLKKAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFD   61 (212)
T ss_pred             HHHhCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            3567889999996 89999999999999985 7777665

>PLN02306 hydroxypyruvate reductase

Probab=94.93  E-value=0.34  Score=45.05  Aligned_cols=38  Identities=24%  Similarity=0.365  Sum_probs=33.3

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHH-HcCCeEEEEecCc
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFA-RHGAKVVIADVED   65 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~-~~g~~vv~~~r~~   65 (305)
                      ..+.||++.|.| .|.||+++|+.|. ..|++|+..++..
T Consensus       161 ~~L~gktvGIiG-~G~IG~~vA~~l~~~fGm~V~~~d~~~  199 (386)
T PLN02306        161 NLLKGQTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQ  199 (386)
T ss_pred             cCCCCCEEEEEC-CCHHHHHHHHHHHhcCCCEEEEECCCC
Confidence            478999999999 5899999999986 7899999888754

>PRK13243 glyoxylate reductase; Reviewed

Probab=94.91  E-value=0.33  Score=44.19  Aligned_cols=39  Identities=23%  Similarity=0.230  Sum_probs=35.0

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcc
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDT   66 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~   66 (305)
                      ..+.||++.|.|- |.||+.+|+.|...|++|+..+|...
T Consensus       146 ~~L~gktvgIiG~-G~IG~~vA~~l~~~G~~V~~~d~~~~  184 (333)
T PRK13243        146 YDVYGKTIGIIGF-GRIGQAVARRAKGFGMRILYYSRTRK  184 (333)
T ss_pred             cCCCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCC
Confidence            4789999999996 89999999999999999999888643

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=94.90  E-value=0.16  Score=46.82  Aligned_cols=79  Identities=14%  Similarity=0.216  Sum_probs=52.8

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCC-eEEEEecCcchhhhHhhhcCCCCeEEEEecCCCH-HHHHHHHHHHHHhcCCc
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGA-KVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLE-EDIENLINSTVSRYGRL  107 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~-~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~-~~i~~~~~~~~~~~g~i  107 (305)
                      .|.++||.|+ |++|...+..+...|+ .|+.+++++.+.+.+.+ +...    ..+|..+. +++.+.+.++..  +.+
T Consensus       186 ~g~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~~~-lGa~----~~i~~~~~~~~~~~~v~~~~~--~g~  257 (368)
T cd08300         186 PGSTVAVFGL-GAVGLAVIQGAKAAGASRIIGIDINPDKFELAKK-FGAT----DCVNPKDHDKPIQQVLVEMTD--GGV  257 (368)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH-cCCC----EEEcccccchHHHHHHHHHhC--CCC
Confidence            4789999985 8999999998888999 68888888777665533 3221    12344432 234444443332  369


Q ss_pred             cEEEEcCCC
Q 021960          108 DILYNNAGV  116 (305)
Q Consensus       108 d~li~nag~  116 (305)
                      |.+|.+.|.
T Consensus       258 d~vid~~g~  266 (368)
T cd08300         258 DYTFECIGN  266 (368)
T ss_pred             cEEEECCCC
Confidence            999998773

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>PRK06932 glycerate dehydrogenase; Provisional

Probab=94.89  E-value=0.29  Score=44.25  Aligned_cols=86  Identities=23%  Similarity=0.329  Sum_probs=53.5

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchh-----hhHhhhcCCCCeEEEEecCCCHHHHHHHHHH-H
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLG-----SVLASTLAPAPVTFVHCDVSLEEDIENLINS-T  100 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~-----~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~-~  100 (305)
                      .++.||++.|.|- |.||+++++.+...|++|+..++.....     ..+.+.+...++..+.+-++..  -+.++++ .
T Consensus       143 ~~l~gktvgIiG~-G~IG~~va~~l~~fg~~V~~~~~~~~~~~~~~~~~l~ell~~sDiv~l~~Plt~~--T~~li~~~~  219 (314)
T PRK06932        143 TDVRGSTLGVFGK-GCLGTEVGRLAQALGMKVLYAEHKGASVCREGYTPFEEVLKQADIVTLHCPLTET--TQNLINAET  219 (314)
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHhcCCCEEEEECCCcccccccccCCHHHHHHhCCEEEEcCCCChH--HhcccCHHH
Confidence            4789999999995 8999999999999999999887643211     1123333445566666666532  2222221 2


Q ss_pred             HHhcCCccEEEEcCCC
Q 021960          101 VSRYGRLDILYNNAGV  116 (305)
Q Consensus       101 ~~~~g~id~li~nag~  116 (305)
                      .+.. +.+.++.|.|-
T Consensus       220 l~~m-k~ga~lIN~aR  234 (314)
T PRK06932        220 LALM-KPTAFLINTGR  234 (314)
T ss_pred             HHhC-CCCeEEEECCC
Confidence            2222 45666556554

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=94.86  E-value=0.16  Score=45.50  Aligned_cols=80  Identities=14%  Similarity=0.148  Sum_probs=52.0

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDI  109 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~  109 (305)
                      .|.++||.|+++++|.+++......|++++.+.+++...+.+.+ . +.. .+  .+..+.+..+. +.+.... ..+|.
T Consensus       139 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~-~-g~~-~~--~~~~~~~~~~~-i~~~~~~-~~~d~  211 (324)
T cd08292         139 PGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAELRA-L-GIG-PV--VSTEQPGWQDK-VREAAGG-APISV  211 (324)
T ss_pred             CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHHh-c-CCC-EE--EcCCCchHHHH-HHHHhCC-CCCcE
Confidence            47899999999999999999888999999888777666555543 2 221 12  23333222222 2222211 24999


Q ss_pred             EEEcCCC
Q 021960          110 LYNNAGV  116 (305)
Q Consensus       110 li~nag~  116 (305)
                      ++.+.|.
T Consensus       212 v~d~~g~  218 (324)
T cd08292         212 ALDSVGG  218 (324)
T ss_pred             EEECCCC
Confidence            9988773

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=94.85  E-value=0.18  Score=42.44  Aligned_cols=37  Identities=30%  Similarity=0.521  Sum_probs=32.1

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCC-eEEEEecC
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGA-KVVIADVE   64 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~-~vv~~~r~   64 (305)
                      ..|..++|+|.|+ ||+|..+++.|+..|. ++++++.+
T Consensus        17 ~~L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D   54 (200)
T TIGR02354        17 QKLEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFD   54 (200)
T ss_pred             HHHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            3567889999997 7999999999999999 58888776

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]

Probab=94.80  E-value=0.31  Score=44.22  Aligned_cols=73  Identities=27%  Similarity=0.289  Sum_probs=50.2

Q ss_pred             eeccCCCCCCCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcch-h---------hhHhhhcCCCCeEEEEec
Q 021960           17 LAWDDAPPSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTL-G---------SVLASTLAPAPVTFVHCD   86 (305)
Q Consensus        17 ~~~~~~~~~~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~-~---------~~~~~~~~~~~v~~~~~D   86 (305)
                      -.|....-....+.|||+-|.|. |.||+++++.+...|++|+..++.... .         ..+.+.+...++..+.+-
T Consensus       128 g~W~~~~~~g~el~gkTvGIiG~-G~IG~~va~~l~afgm~v~~~d~~~~~~~~~~~~~~~~~~Ld~lL~~sDiv~lh~P  206 (324)
T COG0111         128 GEWDRKAFRGTELAGKTVGIIGL-GRIGRAVAKRLKAFGMKVIGYDPYSPRERAGVDGVVGVDSLDELLAEADILTLHLP  206 (324)
T ss_pred             CCccccccccccccCCEEEEECC-CHHHHHHHHHHHhCCCeEEEECCCCchhhhccccceecccHHHHHhhCCEEEEcCC
Confidence            34544222223778999999995 899999999999999999999882222 1         113333445667777777


Q ss_pred             CCCH
Q 021960           87 VSLE   90 (305)
Q Consensus        87 ~~d~   90 (305)
                      ++++
T Consensus       207 lT~e  210 (324)
T COG0111         207 LTPE  210 (324)
T ss_pred             CCcc
Confidence            7753

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=94.71  E-value=0.24  Score=45.56  Aligned_cols=74  Identities=19%  Similarity=0.270  Sum_probs=47.0

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDI  109 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~  109 (305)
                      .|++|||.|+ |+||..++..+...|++|++++.++.+.....+.+.-.  .  .+|..+.+.+.+       ..+.+|+
T Consensus       183 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~~Ga~--~--vi~~~~~~~~~~-------~~~~~D~  250 (360)
T PLN02586        183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRLGAD--S--FLVSTDPEKMKA-------AIGTMDY  250 (360)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHHhCCCc--E--EEcCCCHHHHHh-------hcCCCCE
Confidence            5789999775 89999999888889999888776655443333333211  1  123333322222       1235899


Q ss_pred             EEEcCC
Q 021960          110 LYNNAG  115 (305)
Q Consensus       110 li~nag  115 (305)
                      +|.+.|
T Consensus       251 vid~~g  256 (360)
T PLN02586        251 IIDTVS  256 (360)
T ss_pred             EEECCC
Confidence            998877

>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]

Probab=94.70  E-value=0.27  Score=43.48  Aligned_cols=80  Identities=18%  Similarity=0.282  Sum_probs=52.4

Q ss_pred             CCCEEEEecCCCchHHHHHHHHH-HcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 021960           30 EGKVAIITGGARGIGEAAVRLFA-RHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLD  108 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~-~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id  108 (305)
                      .|++++|.||+|..|.-+ -+|+ -.|+.|+...-+.++...+.....-.    ..+|--++..+.+++++...+  .||
T Consensus       153 ~geTv~VSaAsGAvGql~-GQ~Ak~~Gc~VVGsaGS~EKv~ll~~~~G~d----~afNYK~e~~~~~aL~r~~P~--GID  225 (343)
T KOG1196|consen  153 KGETVFVSAASGAVGQLV-GQFAKLMGCYVVGSAGSKEKVDLLKTKFGFD----DAFNYKEESDLSAALKRCFPE--GID  225 (343)
T ss_pred             CCCEEEEeeccchhHHHH-HHHHHhcCCEEEEecCChhhhhhhHhccCCc----cceeccCccCHHHHHHHhCCC--cce
Confidence            479999999999999754 4555 46998887766666666655543222    112333444555555543222  599


Q ss_pred             EEEEcCCC
Q 021960          109 ILYNNAGV  116 (305)
Q Consensus       109 ~li~nag~  116 (305)
                      +.+-|.|.
T Consensus       226 iYfeNVGG  233 (343)
T KOG1196|consen  226 IYFENVGG  233 (343)
T ss_pred             EEEeccCc
Confidence            99999984

>TIGR01751 crot-CoA-red crotonyl-CoA reductase

Probab=94.66  E-value=0.23  Score=46.31  Aligned_cols=43  Identities=23%  Similarity=0.258  Sum_probs=35.7

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHh
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLA   72 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~   72 (305)
                      .+.+++|+|+++++|..++..+...|++++++.+++.+.+.+.
T Consensus       189 ~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~~~~~~  231 (398)
T TIGR01751       189 PGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKAEYCR  231 (398)
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHH
Confidence            4689999999999999999888889999888877766555444

The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.

>PRK06487 glycerate dehydrogenase; Provisional

Probab=94.64  E-value=0.25  Score=44.74  Aligned_cols=86  Identities=23%  Similarity=0.325  Sum_probs=53.3

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchh----hhHhhhcCCCCeEEEEecCCCHHHHHHHHHH-HH
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLG----SVLASTLAPAPVTFVHCDVSLEEDIENLINS-TV  101 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~----~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~-~~  101 (305)
                      ..+.||++.|.|- |.||+++|+.+...|++|+..++.....    ..+.+.+...++..+.+-++..  -+.++.+ ..
T Consensus       144 ~~l~gktvgIiG~-G~IG~~vA~~l~~fgm~V~~~~~~~~~~~~~~~~l~ell~~sDiv~l~lPlt~~--T~~li~~~~~  220 (317)
T PRK06487        144 VELEGKTLGLLGH-GELGGAVARLAEAFGMRVLIGQLPGRPARPDRLPLDELLPQVDALTLHCPLTEH--TRHLIGAREL  220 (317)
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCCCCcccccccCHHHHHHhCCEEEECCCCChH--HhcCcCHHHH
Confidence            4689999999995 8999999999999999999887652211    1122333445566666665532  2233221 11


Q ss_pred             HhcCCccEEEEcCCC
Q 021960          102 SRYGRLDILYNNAGV  116 (305)
Q Consensus       102 ~~~g~id~li~nag~  116 (305)
                      +.. +.+.++.|.|-
T Consensus       221 ~~m-k~ga~lIN~aR  234 (317)
T PRK06487        221 ALM-KPGALLINTAR  234 (317)
T ss_pred             hcC-CCCeEEEECCC
Confidence            222 45666666654

>PRK08328 hypothetical protein; Provisional

Probab=94.59  E-value=0.15  Score=43.93  Aligned_cols=37  Identities=19%  Similarity=0.434  Sum_probs=31.0

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCC-eEEEEecCc
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGA-KVVIADVED   65 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~-~vv~~~r~~   65 (305)
                      .+.+++|+|.|+ ||+|.++++.|+..|. ++.+++.+.
T Consensus        24 ~L~~~~VlIiG~-GGlGs~ia~~La~~Gvg~i~lvD~D~   61 (231)
T PRK08328         24 KLKKAKVAVVGV-GGLGSPVAYYLAAAGVGRILLIDEQT   61 (231)
T ss_pred             HHhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence            556789999996 7999999999999998 477777654

>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=94.55  E-value=0.26  Score=46.73  Aligned_cols=37  Identities=24%  Similarity=0.427  Sum_probs=32.5

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcc
Q 021960           29 LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDT   66 (305)
Q Consensus        29 l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~   66 (305)
                      +.+|+++|+|.+ +.|.++++.|+++|+.|++.+....
T Consensus         3 ~~~~~~~v~G~g-~~G~~~a~~l~~~g~~v~~~d~~~~   39 (445)
T PRK04308          3 FQNKKILVAGLG-GTGISMIAYLRKNGAEVAAYDAELK   39 (445)
T ss_pred             CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCCC
Confidence            568999999975 9999999999999999999887544

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=94.47  E-value=0.29  Score=43.91  Aligned_cols=80  Identities=21%  Similarity=0.344  Sum_probs=50.8

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDI  109 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~  109 (305)
                      .+.+++|.|+++++|..++..+...|++++++.+++.+.+.+.+ . +..   ...|..+.+...+.+.+.... ..+|.
T Consensus       140 ~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~-g~~---~~~~~~~~~~~~~~~~~~~~~-~~~d~  213 (334)
T PTZ00354        140 KGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFCKK-L-AAI---ILIRYPDEEGFAPKVKKLTGE-KGVNL  213 (334)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-c-CCc---EEEecCChhHHHHHHHHHhCC-CCceE
Confidence            47899999999999999999999999998888777766555532 2 221   112333322122212222111 24899


Q ss_pred             EEEcCC
Q 021960          110 LYNNAG  115 (305)
Q Consensus       110 li~nag  115 (305)
                      ++.+.|
T Consensus       214 ~i~~~~  219 (334)
T PTZ00354        214 VLDCVG  219 (334)
T ss_pred             EEECCc
Confidence            998875

>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional

Probab=94.46  E-value=0.13  Score=46.82  Aligned_cols=34  Identities=9%  Similarity=0.213  Sum_probs=27.3

Q ss_pred             CEEEEecCCCchHHHHHHHHHHcCCeE---EEEecCc
Q 021960           32 KVAIITGGARGIGEAAVRLFARHGAKV---VIADVED   65 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~g~~v---v~~~r~~   65 (305)
                      ..|+|.||||.+|..+++.|+++++.+   ..+.+..
T Consensus         2 ~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~   38 (334)
T PRK14874          2 YNVAVVGATGAVGREMLNILEERNFPVDKLRLLASAR   38 (334)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccc
Confidence            478999999999999999999987753   4454443

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=94.46  E-value=0.19  Score=45.16  Aligned_cols=78  Identities=24%  Similarity=0.383  Sum_probs=51.0

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDI  109 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~  109 (305)
                      .+.+++|.|+++.+|.+++......|++|+.+.+++...+.+.+ +...  .+  +|..+. +..+.+.+...  +.+|.
T Consensus       139 ~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~--~v--~~~~~~-~~~~~~~~~~~--~~vd~  210 (329)
T cd08250         139 SGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFLKS-LGCD--RP--INYKTE-DLGEVLKKEYP--KGVDV  210 (329)
T ss_pred             CCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHHHH-cCCc--eE--EeCCCc-cHHHHHHHhcC--CCCeE
Confidence            57899999999999999988888899999888877666555432 2211  11  233332 22233332222  35899


Q ss_pred             EEEcCC
Q 021960          110 LYNNAG  115 (305)
Q Consensus       110 li~nag  115 (305)
                      ++++.|
T Consensus       211 v~~~~g  216 (329)
T cd08250         211 VYESVG  216 (329)
T ss_pred             EEECCc
Confidence            998876

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>PLN02740 Alcohol dehydrogenase-like

Probab=94.45  E-value=0.21  Score=46.19  Aligned_cols=79  Identities=19%  Similarity=0.213  Sum_probs=51.7

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCC-eEEEEecCcchhhhHhhhcCCCCeEEEEecCCCH-HHHHHHHHHHHHhcCCc
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGA-KVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLE-EDIENLINSTVSRYGRL  107 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~-~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~-~~i~~~~~~~~~~~g~i  107 (305)
                      .|+++||.|+ |+||..++..+...|+ .|+.+++++.+.+.+.+ + +.. .+  +|..+. +...+.+.++..  +.+
T Consensus       198 ~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~~-~-Ga~-~~--i~~~~~~~~~~~~v~~~~~--~g~  269 (381)
T PLN02740        198 AGSSVAIFGL-GAVGLAVAEGARARGASKIIGVDINPEKFEKGKE-M-GIT-DF--INPKDSDKPVHERIREMTG--GGV  269 (381)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHHH-c-CCc-EE--EecccccchHHHHHHHHhC--CCC
Confidence            4789999986 8999999998888999 58888888777665543 2 221 12  244332 123333333322  259


Q ss_pred             cEEEEcCCC
Q 021960          108 DILYNNAGV  116 (305)
Q Consensus       108 d~li~nag~  116 (305)
                      |++|.+.|.
T Consensus       270 dvvid~~G~  278 (381)
T PLN02740        270 DYSFECAGN  278 (381)
T ss_pred             CEEEECCCC
Confidence            999999884

>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

Probab=94.45  E-value=0.41  Score=43.89  Aligned_cols=77  Identities=19%  Similarity=0.235  Sum_probs=49.0

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHcCCe-EEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhc-C-Cc
Q 021960           31 GKVAIITGGARGIGEAAVRLFARHGAK-VVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRY-G-RL  107 (305)
Q Consensus        31 ~k~vlVtGas~giG~~ia~~l~~~g~~-vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~-g-~i  107 (305)
                      +.+|+|+|+ |-||.-.+..+...|+. |+++++++.+++..++..... +   ..+....    .....+.+.. | .+
T Consensus       169 ~~~V~V~Ga-GpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~-~---~~~~~~~----~~~~~~~~~t~g~g~  239 (350)
T COG1063         169 GGTVVVVGA-GPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGAD-V---VVNPSED----DAGAEILELTGGRGA  239 (350)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCe-E---eecCccc----cHHHHHHHHhCCCCC
Confidence            448999996 79999998888888875 666788888887765533222 1   1122221    2222233332 2 49


Q ss_pred             cEEEEcCCC
Q 021960          108 DILYNNAGV  116 (305)
Q Consensus       108 d~li~nag~  116 (305)
                      |++|=++|.
T Consensus       240 D~vie~~G~  248 (350)
T COG1063         240 DVVIEAVGS  248 (350)
T ss_pred             CEEEECCCC
Confidence            999999993

>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional

Probab=94.44  E-value=0.45  Score=43.28  Aligned_cols=41  Identities=34%  Similarity=0.403  Sum_probs=33.2

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCe-EEEEecCcchhhhH
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAK-VVIADVEDTLGSVL   71 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~-vv~~~r~~~~~~~~   71 (305)
                      .+++++|+|+ |++|..++..+...|++ |+.+++++.+.+.+
T Consensus       160 ~g~~vlV~G~-g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~  201 (347)
T PRK10309        160 EGKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDINSEKLALA  201 (347)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH
Confidence            4789999975 99999999888889997 67777777666654

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=94.43  E-value=0.17  Score=47.50  Aligned_cols=40  Identities=23%  Similarity=0.506  Sum_probs=35.3

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchh
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLG   68 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~   68 (305)
                      .+.|++++|.|. |.||+.++..|...|++|++++++..+.
T Consensus       209 ~l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra  248 (425)
T PRK05476        209 LIAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICA  248 (425)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhh
Confidence            468999999996 7999999999999999999998876543

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=94.39  E-value=0.27  Score=43.91  Aligned_cols=79  Identities=16%  Similarity=0.162  Sum_probs=51.2

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDI  109 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~  109 (305)
                      .+.+++|.|+++++|.+++..+...|++++++.+++...+.+. ...-.    ...|..+.+..+.+. +.... ..+|.
T Consensus       138 ~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~----~~~~~~~~~~~~~~~-~~~~~-~~~d~  210 (323)
T cd05282         138 PGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEELK-ALGAD----EVIDSSPEDLAQRVK-EATGG-AGARL  210 (323)
T ss_pred             CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHHHHH-hcCCC----EEecccchhHHHHHH-HHhcC-CCceE
Confidence            5789999999999999999999999999988877766555443 22111    122333322222222 22111 25899


Q ss_pred             EEEcCC
Q 021960          110 LYNNAG  115 (305)
Q Consensus       110 li~nag  115 (305)
                      ++.+.|
T Consensus       211 vl~~~g  216 (323)
T cd05282         211 ALDAVG  216 (323)
T ss_pred             EEECCC
Confidence            998877

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=94.37  E-value=0.29  Score=45.03  Aligned_cols=36  Identities=25%  Similarity=0.407  Sum_probs=29.9

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCC-eEEEEec
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGA-KVVIADV   63 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~-~vv~~~r   63 (305)
                      ..+.+++|+|.|+ ||+|..+++.|+..|. ++.+++.
T Consensus        24 ~~L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~   60 (355)
T PRK05597         24 QSLFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDD   60 (355)
T ss_pred             HHHhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeC
Confidence            3567889999997 8999999999999998 4666654

>PRK06436 glycerate dehydrogenase; Provisional

Probab=94.36  E-value=0.42  Score=42.92  Aligned_cols=37  Identities=24%  Similarity=0.205  Sum_probs=33.4

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecC
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVE   64 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~   64 (305)
                      ..+.||++.|.|- |.||+++|+.+...|++|+..+|+
T Consensus       118 ~~L~gktvgIiG~-G~IG~~vA~~l~afG~~V~~~~r~  154 (303)
T PRK06436        118 KLLYNKSLGILGY-GGIGRRVALLAKAFGMNIYAYTRS  154 (303)
T ss_pred             CCCCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCC
Confidence            5789999999995 899999999888889999999875

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=94.35  E-value=0.15  Score=40.28  Aligned_cols=39  Identities=31%  Similarity=0.463  Sum_probs=35.5

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCc
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVED   65 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~   65 (305)
                      .+++||.++|.|.|.-+|+.++..|.++|++|.++.++.
T Consensus        24 ~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t   62 (140)
T cd05212          24 VRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKT   62 (140)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCC
Confidence            478899999999999999999999999999999887654

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=94.30  E-value=0.14  Score=41.36  Aligned_cols=40  Identities=28%  Similarity=0.443  Sum_probs=32.2

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcch
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTL   67 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~   67 (305)
                      +++||.++|.|.|.-+|+.++..|.++|+.|.++......
T Consensus        33 ~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~~   72 (160)
T PF02882_consen   33 DLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTKN   72 (160)
T ss_dssp             STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSSS
T ss_pred             CCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCCc
Confidence            5889999999999999999999999999999988665433

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>cd08246 crotonyl_coA_red crotonyl-CoA reductase

Probab=94.28  E-value=0.27  Score=45.68  Aligned_cols=44  Identities=23%  Similarity=0.330  Sum_probs=36.6

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhh
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLAS   73 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~   73 (305)
                      .+.+++|+|++|++|.+++..+...|++++++.+++.+.+.+.+
T Consensus       193 ~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~~~~~  236 (393)
T cd08246         193 PGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEYCRA  236 (393)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHH
Confidence            47899999999999999998888899998888887766665543

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=94.28  E-value=0.25  Score=45.39  Aligned_cols=79  Identities=15%  Similarity=0.211  Sum_probs=52.1

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCC-eEEEEecCcchhhhHhhhcCCCCeEEEEecCCCH-HHHHHHHHHHHHhcCCc
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGA-KVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLE-EDIENLINSTVSRYGRL  107 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~-~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~-~~i~~~~~~~~~~~g~i  107 (305)
                      .|.+|||.|+ |++|...+..+...|+ +|+.+++++.+.+.+.+ +...    ..+|..+. +++.+.+.++..  +.+
T Consensus       187 ~g~~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~~~-~Ga~----~~i~~~~~~~~~~~~v~~~~~--~~~  258 (369)
T cd08301         187 KGSTVAIFGL-GAVGLAVAEGARIRGASRIIGVDLNPSKFEQAKK-FGVT----EFVNPKDHDKPVQEVIAEMTG--GGV  258 (369)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH-cCCc----eEEcccccchhHHHHHHHHhC--CCC
Confidence            4789999985 8999999988888898 68888888777665533 3211    11233321 234444444332  259


Q ss_pred             cEEEEcCCC
Q 021960          108 DILYNNAGV  116 (305)
Q Consensus       108 d~li~nag~  116 (305)
                      |+++.+.|.
T Consensus       259 d~vid~~G~  267 (369)
T cd08301         259 DYSFECTGN  267 (369)
T ss_pred             CEEEECCCC
Confidence            999998773

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=94.27  E-value=0.74  Score=41.34  Aligned_cols=35  Identities=17%  Similarity=0.370  Sum_probs=28.8

Q ss_pred             CEEEEecCCCchHHHHHHHHHHcCC--eEEEEecCcch
Q 021960           32 KVAIITGGARGIGEAAVRLFARHGA--KVVIADVEDTL   67 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~g~--~vv~~~r~~~~   67 (305)
                      +.|.|+|+ |+||.+++..|+.++.  .+++.++.+..
T Consensus         1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~   37 (313)
T COG0039           1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEK   37 (313)
T ss_pred             CeEEEECC-ChHHHHHHHHHhcccccceEEEEEccccc
Confidence            36889999 9999999999988765  58888887433

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=94.25  E-value=0.18  Score=44.72  Aligned_cols=79  Identities=25%  Similarity=0.362  Sum_probs=50.5

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDI  109 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~  109 (305)
                      .+++++|+|+++++|..++..+...|+.|+.+.++..+.+.+.+ . +.. .+  .+..+.+..+.+. ..... ..+|.
T Consensus       139 ~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~-g~~-~~--~~~~~~~~~~~i~-~~~~~-~~~d~  211 (323)
T cd08241         139 PGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLALARA-L-GAD-HV--IDYRDPDLRERVK-ALTGG-RGVDV  211 (323)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHHHHHH-c-CCc-ee--eecCCccHHHHHH-HHcCC-CCcEE
Confidence            47899999999999999999999999999988887665554432 2 211 11  1222222222222 22111 25899


Q ss_pred             EEEcCC
Q 021960          110 LYNNAG  115 (305)
Q Consensus       110 li~nag  115 (305)
                      ++++.|
T Consensus       212 v~~~~g  217 (323)
T cd08241         212 VYDPVG  217 (323)
T ss_pred             EEECcc
Confidence            999876

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=94.24  E-value=0.28  Score=43.55  Aligned_cols=42  Identities=29%  Similarity=0.445  Sum_probs=35.9

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhH
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVL   71 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~   71 (305)
                      .|.+++|.|+++++|.+++..+...|++|+.+.+++...+.+
T Consensus       142 ~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~  183 (320)
T cd08243         142 PGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAALL  183 (320)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            478999999999999999999989999998888776655544

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=94.19  E-value=0.19  Score=47.65  Aligned_cols=77  Identities=22%  Similarity=0.236  Sum_probs=57.0

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 021960           29 LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLD  108 (305)
Q Consensus        29 l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id  108 (305)
                      +..+.++|.|+ |.+|+.+++.|.++|+.|++++++++..+.+.+..  ..+.++..|.++.+.+++.-      ..+.|
T Consensus       229 ~~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~~--~~~~~i~gd~~~~~~L~~~~------~~~a~  299 (453)
T PRK09496        229 KPVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAEEL--PNTLVLHGDGTDQELLEEEG------IDEAD  299 (453)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHC--CCCeEEECCCCCHHHHHhcC------CccCC
Confidence            34678999998 89999999999999999999998877655544432  23667889999986665431      12567


Q ss_pred             EEEEcC
Q 021960          109 ILYNNA  114 (305)
Q Consensus       109 ~li~na  114 (305)
                      .+|...
T Consensus       300 ~vi~~~  305 (453)
T PRK09496        300 AFIALT  305 (453)
T ss_pred             EEEECC
Confidence            777543

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=94.18  E-value=0.36  Score=44.67  Aligned_cols=75  Identities=16%  Similarity=0.251  Sum_probs=47.5

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDI  109 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~  109 (305)
                      .|++++|.|+ |++|...+......|++|+++++++.......+.+.-.    ..+|..+.+.+.+       ..+.+|+
T Consensus       178 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~~lGa~----~~i~~~~~~~v~~-------~~~~~D~  245 (375)
T PLN02178        178 SGKRLGVNGL-GGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLGAD----SFLVTTDSQKMKE-------AVGTMDF  245 (375)
T ss_pred             CCCEEEEEcc-cHHHHHHHHHHHHcCCeEEEEeCChHHhHHHHHhCCCc----EEEcCcCHHHHHH-------hhCCCcE
Confidence            5789999986 89999999888889999888877654422232333211    1123333322222       2245899


Q ss_pred             EEEcCCC
Q 021960          110 LYNNAGV  116 (305)
Q Consensus       110 li~nag~  116 (305)
                      +|.+.|.
T Consensus       246 vid~~G~  252 (375)
T PLN02178        246 IIDTVSA  252 (375)
T ss_pred             EEECCCc
Confidence            9998873

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=94.16  E-value=0.32  Score=39.88  Aligned_cols=32  Identities=28%  Similarity=0.458  Sum_probs=27.0

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCe-EEEEecCc
Q 021960           33 VAIITGGARGIGEAAVRLFARHGAK-VVIADVED   65 (305)
Q Consensus        33 ~vlVtGas~giG~~ia~~l~~~g~~-vv~~~r~~   65 (305)
                      +|+|.|+ ||+|..+++.|++.|.. +.+++.+.
T Consensus         1 ~VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D~   33 (174)
T cd01487           1 KVGIAGA-GGLGSNIAVLLARSGVGNLKLVDFDV   33 (174)
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            3688885 89999999999999985 88887654

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK07574 formate dehydrogenase; Provisional

Probab=94.13  E-value=0.52  Score=43.79  Aligned_cols=38  Identities=29%  Similarity=0.322  Sum_probs=34.4

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCc
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVED   65 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~   65 (305)
                      .++.||++.|.|. |.||+.+|+.|...|++|+..+|..
T Consensus       188 ~~L~gktVGIvG~-G~IG~~vA~~l~~fG~~V~~~dr~~  225 (385)
T PRK07574        188 YDLEGMTVGIVGA-GRIGLAVLRRLKPFDVKLHYTDRHR  225 (385)
T ss_pred             eecCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCCC
Confidence            4789999999996 7899999999999999999998865

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=94.10  E-value=0.34  Score=42.50  Aligned_cols=38  Identities=16%  Similarity=0.224  Sum_probs=31.3

Q ss_pred             EEEecCCCchHHHHHHHHHHcC----CeEEEEecCcchhhhH
Q 021960           34 AIITGGARGIGEAAVRLFARHG----AKVVIADVEDTLGSVL   71 (305)
Q Consensus        34 vlVtGas~giG~~ia~~l~~~g----~~vv~~~r~~~~~~~~   71 (305)
                      +.|+||+|.+|..++..|+..|    ..+++++++++..+..
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~   42 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGV   42 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHH
Confidence            4689998899999999999988    6899999877554443

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=94.10  E-value=0.38  Score=43.04  Aligned_cols=76  Identities=20%  Similarity=0.199  Sum_probs=49.8

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEE
Q 021960           31 GKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDIL  110 (305)
Q Consensus        31 ~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~l  110 (305)
                      ++++||.|+++++|..++..+...|++|+.+.+++.+.+.+.+ ..-.    ...|..+. .. +.+....  .+.+|.+
T Consensus       147 ~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~----~v~~~~~~-~~-~~~~~~~--~~~~d~v  217 (326)
T cd08289         147 QGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYLKK-LGAK----EVIPREEL-QE-ESIKPLE--KQRWAGA  217 (326)
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHHHH-cCCC----EEEcchhH-HH-HHHHhhc--cCCcCEE
Confidence            6799999999999999998888999999988888776665533 2211    11233322 21 2222221  1358999


Q ss_pred             EEcCC
Q 021960          111 YNNAG  115 (305)
Q Consensus       111 i~nag  115 (305)
                      +.+.|
T Consensus       218 ld~~g  222 (326)
T cd08289         218 VDPVG  222 (326)
T ss_pred             EECCc
Confidence            88766

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.10  E-value=0.21  Score=44.57  Aligned_cols=79  Identities=19%  Similarity=0.222  Sum_probs=53.5

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCC
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGR  106 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~  106 (305)
                      .++.||.+.|.|.++-+|+.++..|.++|++|.++.+.........   ...++  +..=+.+...+...+       =+
T Consensus       155 i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~l~e~~---~~ADI--VIsavg~~~~v~~~~-------ik  222 (301)
T PRK14194        155 GDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDAKALC---RQADI--VVAAVGRPRLIDADW-------LK  222 (301)
T ss_pred             CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCCHHHHH---hcCCE--EEEecCChhcccHhh-------cc
Confidence            3678999999999999999999999999999999966554333222   22223  333455555554432       14


Q ss_pred             ccEEEEcCCCC
Q 021960          107 LDILYNNAGVL  117 (305)
Q Consensus       107 id~li~nag~~  117 (305)
                      ...+|...|+.
T Consensus       223 ~GaiVIDvgin  233 (301)
T PRK14194        223 PGAVVIDVGIN  233 (301)
T ss_pred             CCcEEEEeccc
Confidence            55666667764

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=94.09  E-value=0.35  Score=44.73  Aligned_cols=36  Identities=25%  Similarity=0.511  Sum_probs=29.9

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCC-eEEEEecC
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGA-KVVIADVE   64 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~-~vv~~~r~   64 (305)
                      .+.+.+|+|.|+ ||+|..+++.|+..|. ++.+++.+
T Consensus        38 ~l~~~~VliiG~-GglG~~v~~~La~~Gvg~i~ivD~D   74 (370)
T PRK05600         38 RLHNARVLVIGA-GGLGCPAMQSLASAGVGTITLIDDD   74 (370)
T ss_pred             HhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            556789999996 7999999999999997 67776543

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.08  E-value=0.22  Score=44.48  Aligned_cols=78  Identities=21%  Similarity=0.217  Sum_probs=53.3

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCC
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIAD-VEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGR  106 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~-r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~  106 (305)
                      ++.||.++|.|-++-+|+.+|..|.++|+.|.++. |+....+.+    ...++  +.+=+.+.+.++..+       =+
T Consensus       155 ~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~~l~e~~----~~ADI--VIsavg~~~~v~~~~-------lk  221 (296)
T PRK14188        155 DLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTRDLPAVC----RRADI--LVAAVGRPEMVKGDW-------IK  221 (296)
T ss_pred             CCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCCCHHHHH----hcCCE--EEEecCChhhcchhe-------ec
Confidence            67899999999999999999999999999999994 554322222    22223  444456655555432       14


Q ss_pred             ccEEEEcCCCCC
Q 021960          107 LDILYNNAGVLG  118 (305)
Q Consensus       107 id~li~nag~~~  118 (305)
                      ...+|...|+..
T Consensus       222 ~GavVIDvGin~  233 (296)
T PRK14188        222 PGATVIDVGINR  233 (296)
T ss_pred             CCCEEEEcCCcc
Confidence            566777777654

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=94.07  E-value=0.29  Score=43.17  Aligned_cols=79  Identities=16%  Similarity=0.298  Sum_probs=50.1

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDI  109 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~  109 (305)
                      .+++++|.|+++++|.+++..+...|+.|+.+.+++.+.+.+.+ .. .. .++  +..+....+. +.+.... ..+|.
T Consensus       136 ~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g-~~-~~~--~~~~~~~~~~-~~~~~~~-~~~d~  208 (320)
T cd05286         136 PGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAELARA-AG-AD-HVI--NYRDEDFVER-VREITGG-RGVDV  208 (320)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHH-CC-CC-EEE--eCCchhHHHH-HHHHcCC-CCeeE
Confidence            57899999999999999999888999999888877665554432 22 11 111  2222222222 2222111 25899


Q ss_pred             EEEcCC
Q 021960          110 LYNNAG  115 (305)
Q Consensus       110 li~nag  115 (305)
                      ++++.|
T Consensus       209 vl~~~~  214 (320)
T cd05286         209 VYDGVG  214 (320)
T ss_pred             EEECCC
Confidence            998876

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>PLN02494 adenosylhomocysteinase

Probab=94.07  E-value=0.26  Score=46.71  Aligned_cols=39  Identities=26%  Similarity=0.536  Sum_probs=34.3

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcch
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTL   67 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~   67 (305)
                      .+.||+++|.|. |.||+.++..+...|++|++++++..+
T Consensus       251 ~LaGKtVvViGy-G~IGr~vA~~aka~Ga~VIV~e~dp~r  289 (477)
T PLN02494        251 MIAGKVAVICGY-GDVGKGCAAAMKAAGARVIVTEIDPIC  289 (477)
T ss_pred             ccCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchh
Confidence            468999999996 699999999999999999998887643

>PRK13403 ketol-acid reductoisomerase; Provisional

Probab=94.06  E-value=0.8  Score=41.33  Aligned_cols=91  Identities=16%  Similarity=0.172  Sum_probs=55.5

Q ss_pred             CCCCCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhH----------hhhcCCCCeEEEEecCCCHHH
Q 021960           23 PPSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVL----------ASTLAPAPVTFVHCDVSLEED   92 (305)
Q Consensus        23 ~~~~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~----------~~~~~~~~v~~~~~D~~d~~~   92 (305)
                      ......|+||++.|.|- |.+|+++|+.|...|++|++..+.....+..          .+.....++..+-  +.|.++
T Consensus         8 d~~~~~LkgKtVGIIG~-GsIG~amA~nL~d~G~~ViV~~r~~~s~~~A~~~G~~v~sl~Eaak~ADVV~ll--LPd~~t   84 (335)
T PRK13403          8 DANVELLQGKTVAVIGY-GSQGHAQAQNLRDSGVEVVVGVRPGKSFEVAKADGFEVMSVSEAVRTAQVVQML--LPDEQQ   84 (335)
T ss_pred             cCChhhhCcCEEEEEeE-cHHHHHHHHHHHHCcCEEEEEECcchhhHHHHHcCCEECCHHHHHhcCCEEEEe--CCChHH
Confidence            33456788999999995 8999999999999999998876653322211          1112233343333  334444


Q ss_pred             HHHHHH-HHHHhcCCccEEEEcCCCC
Q 021960           93 IENLIN-STVSRYGRLDILYNNAGVL  117 (305)
Q Consensus        93 i~~~~~-~~~~~~g~id~li~nag~~  117 (305)
                       +.++. .+.....+=.+|+...|+.
T Consensus        85 -~~V~~~eil~~MK~GaiL~f~hgfn  109 (335)
T PRK13403         85 -AHVYKAEVEENLREGQMLLFSHGFN  109 (335)
T ss_pred             -HHHHHHHHHhcCCCCCEEEECCCcc
Confidence             45553 3444433334667676754

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=94.04  E-value=0.46  Score=43.02  Aligned_cols=75  Identities=28%  Similarity=0.464  Sum_probs=48.3

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDI  109 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~  109 (305)
                      .|.+++|+|+++++|.+++......|++|+.+.++ ...+.+ ......    ..+|..+.+..+.+    ... +.+|.
T Consensus       162 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~-~~~~~~-~~~g~~----~~~~~~~~~~~~~l----~~~-~~vd~  230 (350)
T cd08248         162 AGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCST-DAIPLV-KSLGAD----DVIDYNNEDFEEEL----TER-GKFDV  230 (350)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCc-chHHHH-HHhCCc----eEEECCChhHHHHH----Hhc-CCCCE
Confidence            38999999999999999999888999998877654 233322 222211    12344443333322    222 46999


Q ss_pred             EEEcCC
Q 021960          110 LYNNAG  115 (305)
Q Consensus       110 li~nag  115 (305)
                      ++.+.|
T Consensus       231 vi~~~g  236 (350)
T cd08248         231 ILDTVG  236 (350)
T ss_pred             EEECCC
Confidence            998876

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=94.04  E-value=0.079  Score=42.75  Aligned_cols=38  Identities=26%  Similarity=0.274  Sum_probs=33.2

Q ss_pred             CCCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEec
Q 021960           25 SHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADV   63 (305)
Q Consensus        25 ~~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r   63 (305)
                      ...+++|+.++|.|| |.+|...++.|.+.|++|.+++.
T Consensus         7 ~~l~l~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIsp   44 (157)
T PRK06719          7 LMFNLHNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVSP   44 (157)
T ss_pred             eEEEcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcC
Confidence            344789999999997 79999999999999999988853

>PLN03139 formate dehydrogenase; Provisional

Probab=94.02  E-value=0.51  Score=43.83  Aligned_cols=38  Identities=24%  Similarity=0.281  Sum_probs=34.3

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCc
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVED   65 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~   65 (305)
                      .++.||++.|.| .|.||+.+++.|...|++|+..++..
T Consensus       195 ~~L~gktVGIVG-~G~IG~~vA~~L~afG~~V~~~d~~~  232 (386)
T PLN03139        195 YDLEGKTVGTVG-AGRIGRLLLQRLKPFNCNLLYHDRLK  232 (386)
T ss_pred             cCCCCCEEEEEe-ecHHHHHHHHHHHHCCCEEEEECCCC
Confidence            578999999999 58999999999999999999988764

>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins

Probab=93.97  E-value=0.26  Score=35.19  Aligned_cols=36  Identities=33%  Similarity=0.666  Sum_probs=30.6

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHc-CCeEEEEec
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARH-GAKVVIADV   63 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~-g~~vv~~~r   63 (305)
                      .++.+++++|.|. |+.|+.++..|.+. +..|.+.+|
T Consensus        19 ~~~~~~~v~i~G~-G~~g~~~a~~l~~~~~~~v~v~~r   55 (86)
T cd05191          19 KSLKGKTVVVLGA-GEVGKGIAKLLADEGGKKVVLCDR   55 (86)
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC
Confidence            4578899999998 99999999999998 556777766

Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=93.94  E-value=0.28  Score=44.10  Aligned_cols=79  Identities=24%  Similarity=0.320  Sum_probs=47.7

Q ss_pred             CCCEE-EEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 021960           30 EGKVA-IITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLD  108 (305)
Q Consensus        30 ~~k~v-lVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id  108 (305)
                      .+..+ +++||+|++|..++......|++|+.+.+++.+.+.+.+ + +.. .+  .|..+.+..+.+ .+.... ..+|
T Consensus       142 ~~~~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~~~-~-g~~-~~--i~~~~~~~~~~v-~~~~~~-~~~d  214 (324)
T cd08291         142 EGAKAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLLKK-I-GAE-YV--LNSSDPDFLEDL-KELIAK-LNAT  214 (324)
T ss_pred             CCCcEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-c-CCc-EE--EECCCccHHHHH-HHHhCC-CCCc
Confidence            34444 445999999999988777889999888887766655543 3 221 12  233332222222 222111 2599


Q ss_pred             EEEEcCC
Q 021960          109 ILYNNAG  115 (305)
Q Consensus       109 ~li~nag  115 (305)
                      ++|.+.|
T Consensus       215 ~vid~~g  221 (324)
T cd08291         215 IFFDAVG  221 (324)
T ss_pred             EEEECCC
Confidence            9999877

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>PRK15438 erythronate-4-phosphate dehydrogenase PdxB; Provisional

Probab=93.92  E-value=0.36  Score=44.64  Aligned_cols=63  Identities=16%  Similarity=0.159  Sum_probs=45.2

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchh------hhHhhhcCCCCeEEEEecCCCH
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLG------SVLASTLAPAPVTFVHCDVSLE   90 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~------~~~~~~~~~~~v~~~~~D~~d~   90 (305)
                      ..+.||++.|.|. |.||+.+++.|...|++|+..++.....      ..+.+.+...++..+.+-+++.
T Consensus       112 ~~L~gktvGIIG~-G~IG~~vA~~l~a~G~~V~~~dp~~~~~~~~~~~~~L~ell~~sDiI~lh~PLt~~  180 (378)
T PRK15438        112 FSLHDRTVGIVGV-GNVGRRLQARLEALGIKTLLCDPPRADRGDEGDFRSLDELVQEADILTFHTPLFKD  180 (378)
T ss_pred             CCcCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCcccccccccccCCHHHHHhhCCEEEEeCCCCCC
Confidence            4689999999996 8999999999999999999987532210      1122333445676666777654

>PRK15409 bifunctional glyoxylate/hydroxypyruvate reductase B; Provisional

Probab=93.91  E-value=0.55  Score=42.57  Aligned_cols=86  Identities=15%  Similarity=0.158  Sum_probs=52.6

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHH-HcCCeEEEEecCcchhh---------hHhhhcCCCCeEEEEecCCCHHHHHHH
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFA-RHGAKVVIADVEDTLGS---------VLASTLAPAPVTFVHCDVSLEEDIENL   96 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~-~~g~~vv~~~r~~~~~~---------~~~~~~~~~~v~~~~~D~~d~~~i~~~   96 (305)
                      ..+.||++.|.|- |.||+++++.+. ..|++|+..++......         .+.+.+...++..+.+-++..  -+.+
T Consensus       141 ~~L~gktvGIiG~-G~IG~~va~~l~~~fgm~V~~~~~~~~~~~~~~~~~~~~~l~ell~~sDvv~lh~plt~~--T~~l  217 (323)
T PRK15409        141 TDVHHKTLGIVGM-GRIGMALAQRAHFGFNMPILYNARRHHKEAEERFNARYCDLDTLLQESDFVCIILPLTDE--THHL  217 (323)
T ss_pred             CCCCCCEEEEEcc-cHHHHHHHHHHHhcCCCEEEEECCCCchhhHHhcCcEecCHHHHHHhCCEEEEeCCCChH--Hhhc
Confidence            4789999999995 899999999997 78999998876532211         112223345566666665532  2333


Q ss_pred             HHH-HHHhcCCccEEEEcCCC
Q 021960           97 INS-TVSRYGRLDILYNNAGV  116 (305)
Q Consensus        97 ~~~-~~~~~g~id~li~nag~  116 (305)
                      +.. ..+.. +.+.++.|.+-
T Consensus       218 i~~~~l~~m-k~ga~lIN~aR  237 (323)
T PRK15409        218 FGAEQFAKM-KSSAIFINAGR  237 (323)
T ss_pred             cCHHHHhcC-CCCeEEEECCC
Confidence            321 22222 45666556554

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=93.91  E-value=0.34  Score=43.79  Aligned_cols=79  Identities=23%  Similarity=0.317  Sum_probs=51.7

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDI  109 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~  109 (305)
                      .+.++||.|+++++|.+++..+...|++|+.+.+++.+.+.+. .+...    ..++..+.+..+.+.+.. . .+.+|.
T Consensus       165 ~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~----~v~~~~~~~~~~~~~~~~-~-~~~vd~  237 (341)
T cd08297         165 PGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELAK-ELGAD----AFVDFKKSDDVEAVKELT-G-GGGAHA  237 (341)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-HcCCc----EEEcCCCccHHHHHHHHh-c-CCCCCE
Confidence            4789999999999999999999999999999988876665553 33211    112333332223322211 1 135999


Q ss_pred             EEEcCC
Q 021960          110 LYNNAG  115 (305)
Q Consensus       110 li~nag  115 (305)
                      ++++.+
T Consensus       238 vl~~~~  243 (341)
T cd08297         238 VVVTAV  243 (341)
T ss_pred             EEEcCC
Confidence            998665

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase

Probab=93.80  E-value=0.3  Score=44.50  Aligned_cols=77  Identities=21%  Similarity=0.361  Sum_probs=50.1

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCC-eEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhc--CC
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGA-KVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRY--GR  106 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~-~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~--g~  106 (305)
                      .|++++|+|+ +++|..+++.+...|+ .|+++++++.+.+.+.+ + +..   ..+|..+.+..+.    +.+..  +.
T Consensus       172 ~g~~vlI~g~-g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~~~-~-ga~---~~i~~~~~~~~~~----l~~~~~~~~  241 (351)
T cd08233         172 PGDTALVLGA-GPIGLLTILALKAAGASKIIVSEPSEARRELAEE-L-GAT---IVLDPTEVDVVAE----VRKLTGGGG  241 (351)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-h-CCC---EEECCCccCHHHH----HHHHhCCCC
Confidence            4789999985 8999999999889999 78888777666554433 2 221   1234444332222    22222  24


Q ss_pred             ccEEEEcCCC
Q 021960          107 LDILYNNAGV  116 (305)
Q Consensus       107 id~li~nag~  116 (305)
                      +|.+|.+.|.
T Consensus       242 ~d~vid~~g~  251 (351)
T cd08233         242 VDVSFDCAGV  251 (351)
T ss_pred             CCEEEECCCC
Confidence            9999999873

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=93.79  E-value=0.061  Score=40.04  Aligned_cols=37  Identities=32%  Similarity=0.519  Sum_probs=31.6

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCc
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVED   65 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~   65 (305)
                      +++|+.+||+|+ |.+|..-++.|++.|++|.+++.+.
T Consensus         4 ~l~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~   40 (103)
T PF13241_consen    4 DLKGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEI   40 (103)
T ss_dssp             --TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSE
T ss_pred             EcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCch
Confidence            578999999997 8999999999999999999998774

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=93.73  E-value=0.17  Score=49.50  Aligned_cols=72  Identities=15%  Similarity=0.082  Sum_probs=53.0

Q ss_pred             CEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEEE
Q 021960           32 KVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILY  111 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~li  111 (305)
                      ..++|.|. |.+|+.+++.|.++|+++++++.++++.+...+    .....+..|.+|++..+++-  +    .+.|.++
T Consensus       418 ~hiiI~G~-G~~G~~la~~L~~~g~~vvvId~d~~~~~~~~~----~g~~~i~GD~~~~~~L~~a~--i----~~a~~vi  486 (558)
T PRK10669        418 NHALLVGY-GRVGSLLGEKLLAAGIPLVVIETSRTRVDELRE----RGIRAVLGNAANEEIMQLAH--L----DCARWLL  486 (558)
T ss_pred             CCEEEECC-ChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH----CCCeEEEcCCCCHHHHHhcC--c----cccCEEE
Confidence            45677775 789999999999999999999998776665543    23778999999976666531  1    2467666


Q ss_pred             EcC
Q 021960          112 NNA  114 (305)
Q Consensus       112 ~na  114 (305)
                      .+.
T Consensus       487 v~~  489 (558)
T PRK10669        487 LTI  489 (558)
T ss_pred             EEc
Confidence            543

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=93.72  E-value=0.14  Score=43.70  Aligned_cols=40  Identities=20%  Similarity=0.283  Sum_probs=34.3

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHh
Q 021960           33 VAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLA   72 (305)
Q Consensus        33 ~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~   72 (305)
                      ++.|+||+|.+|.+++..|++.|++|.+.+|+.+..+.+.
T Consensus         2 kI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~   41 (219)
T TIGR01915         2 KIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAA   41 (219)
T ss_pred             EEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHH
Confidence            5889999999999999999999999999998876655443

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=93.71  E-value=0.5  Score=37.18  Aligned_cols=31  Identities=26%  Similarity=0.502  Sum_probs=25.9

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCC-eEEEEecC
Q 021960           33 VAIITGGARGIGEAAVRLFARHGA-KVVIADVE   64 (305)
Q Consensus        33 ~vlVtGas~giG~~ia~~l~~~g~-~vv~~~r~   64 (305)
                      +++|.|+ ||+|..+++.|+..|. ++.+++.+
T Consensus         1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d   32 (143)
T cd01483           1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFD   32 (143)
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCC
Confidence            3788886 8999999999999998 57777544

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=93.54  E-value=0.71  Score=41.40  Aligned_cols=82  Identities=21%  Similarity=0.294  Sum_probs=55.8

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHcCC-eEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 021960           31 GKVAIITGGARGIGEAAVRLFARHGA-KVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDI  109 (305)
Q Consensus        31 ~k~vlVtGas~giG~~ia~~l~~~g~-~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~  109 (305)
                      |.+|||.|| |-||......+-..|+ +|++++..+.+.+..++ + +.++.......++.+.+.+.+++..... .+|+
T Consensus       170 Gs~vLV~GA-GPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~-~-Ga~~~~~~~~~~~~~~~~~~v~~~~g~~-~~d~  245 (354)
T KOG0024|consen  170 GSKVLVLGA-GPIGLLTGLVAKAMGASDVVITDLVANRLELAKK-F-GATVTDPSSHKSSPQELAELVEKALGKK-QPDV  245 (354)
T ss_pred             CCeEEEECC-cHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHH-h-CCeEEeeccccccHHHHHHHHHhhcccc-CCCe
Confidence            779999997 7899988888888887 59999999888887665 3 3223222222223444555554444322 3999


Q ss_pred             EEEcCCC
Q 021960          110 LYNNAGV  116 (305)
Q Consensus       110 li~nag~  116 (305)
                      .|.|.|.
T Consensus       246 ~~dCsG~  252 (354)
T KOG0024|consen  246 TFDCSGA  252 (354)
T ss_pred             EEEccCc
Confidence            9999985

>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase

Probab=93.54  E-value=0.15  Score=47.34  Aligned_cols=37  Identities=22%  Similarity=0.357  Sum_probs=30.6

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHc-CCeEEEEecCcc
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARH-GAKVVIADVEDT   66 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~-g~~vv~~~r~~~   66 (305)
                      +.+.+.|.||||.+|..+.+.|.++ ..+|..+.++..
T Consensus        37 ~~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~s   74 (381)
T PLN02968         37 EKKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRK   74 (381)
T ss_pred             cccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhh
Confidence            4468999999999999999999998 667877765433

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=93.49  E-value=0.62  Score=42.01  Aligned_cols=113  Identities=13%  Similarity=0.065  Sum_probs=64.4

Q ss_pred             CEEEEecCCCchHHHHHHHHHHcCC--eEEEEecCcchhhhHhhhcCC-----CCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           32 KVAIITGGARGIGEAAVRLFARHGA--KVVIADVEDTLGSVLASTLAP-----APVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~g~--~vv~~~r~~~~~~~~~~~~~~-----~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      .++.|+|+ |.+|.+++..|+..|.  .+++++.++....-....+..     ....+..  ..|.+.           .
T Consensus         4 ~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~--~~dy~~-----------~   69 (312)
T cd05293           4 NKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEA--DKDYSV-----------T   69 (312)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEE--CCCHHH-----------h
Confidence            47899996 9999999999998775  588999876543222221111     0011111  123322           1


Q ss_pred             CCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC-CCCEEEEeccccc
Q 021960          105 GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINR-GGGCIISTASVAG  172 (305)
Q Consensus       105 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~isS~~~  172 (305)
                      ..-|++|.+||....       ...+..+   .+..|..-    ++.+.+.+.+. ..+.++++|-...
T Consensus        70 ~~adivvitaG~~~k-------~g~~R~d---ll~~N~~i----~~~~~~~i~~~~p~~~vivvsNP~d  124 (312)
T cd05293          70 ANSKVVIVTAGARQN-------EGESRLD---LVQRNVDI----FKGIIPKLVKYSPNAILLVVSNPVD  124 (312)
T ss_pred             CCCCEEEECCCCCCC-------CCCCHHH---HHHHHHHH----HHHHHHHHHHhCCCcEEEEccChHH
Confidence            368999999997421       1234333   34555543    44444444433 4577777775443

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK05479 ketol-acid reductoisomerase; Provisional

Probab=93.48  E-value=0.82  Score=41.49  Aligned_cols=44  Identities=25%  Similarity=0.265  Sum_probs=35.5

Q ss_pred             CCCCCCCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCc
Q 021960           21 DAPPSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVED   65 (305)
Q Consensus        21 ~~~~~~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~   65 (305)
                      +.......+++|++.|.|. |.+|.++++.|.+.|++|++..++.
T Consensus         7 ~~d~~~~~L~gktIgIIG~-GsmG~AlA~~L~~sG~~Vvv~~r~~   50 (330)
T PRK05479          7 DKDADLSLIKGKKVAIIGY-GSQGHAHALNLRDSGVDVVVGLREG   50 (330)
T ss_pred             cCCCChhhhCCCEEEEEee-HHHHHHHHHHHHHCCCEEEEEECCc
Confidence            3344455778999999985 6899999999999999998876653

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=93.33  E-value=0.72  Score=38.67  Aligned_cols=36  Identities=19%  Similarity=0.394  Sum_probs=29.6

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCe-EEEEecC
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAK-VVIADVE   64 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~-vv~~~r~   64 (305)
                      .+.+.+|+|.|+ ||+|.++++.|+..|.. +.+++.+
T Consensus        16 ~L~~s~VlviG~-gglGsevak~L~~~GVg~i~lvD~d   52 (198)
T cd01485          16 KLRSAKVLIIGA-GALGAEIAKNLVLAGIDSITIVDHR   52 (198)
T ss_pred             HHhhCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEECC
Confidence            456788999986 56999999999999985 7777654

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2

Probab=93.33  E-value=0.4  Score=43.14  Aligned_cols=31  Identities=23%  Similarity=0.469  Sum_probs=25.6

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCC-eEEEEecC
Q 021960           33 VAIITGGARGIGEAAVRLFARHGA-KVVIADVE   64 (305)
Q Consensus        33 ~vlVtGas~giG~~ia~~l~~~g~-~vv~~~r~   64 (305)
                      .|||.|+ ||+|..+++.|+..|. ++.++|.+
T Consensus         1 kVlIVGa-GGlG~EiaKnLal~Gvg~ItIvD~D   32 (312)
T cd01489           1 KVLVVGA-GGIGCELLKNLVLTGFGEIHIIDLD   32 (312)
T ss_pred             CEEEECC-CHHHHHHHHHHHHhcCCeEEEEcCC
Confidence            3788886 8999999999999998 47777654

UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>PRK00257 erythronate-4-phosphate dehydrogenase; Validated

Probab=93.31  E-value=0.62  Score=43.24  Aligned_cols=62  Identities=21%  Similarity=0.256  Sum_probs=43.8

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchh------hhHhhhcCCCCeEEEEecCCC
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLG------SVLASTLAPAPVTFVHCDVSL   89 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~------~~~~~~~~~~~v~~~~~D~~d   89 (305)
                      ..+.||++.|.|. |.||+.+++.|...|++|++.++.....      ..+.+.+...++..+.+-++.
T Consensus       112 ~~l~gktvGIIG~-G~IG~~va~~l~a~G~~V~~~Dp~~~~~~~~~~~~~l~ell~~aDiV~lh~Plt~  179 (381)
T PRK00257        112 VDLAERTYGVVGA-GHVGGRLVRVLRGLGWKVLVCDPPRQEAEGDGDFVSLERILEECDVISLHTPLTK  179 (381)
T ss_pred             CCcCcCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCcccccccCccccCHHHHHhhCCEEEEeCcCCC
Confidence            4788999999996 7899999999999999999987643211      112222334556666666654

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=93.30  E-value=0.41  Score=45.42  Aligned_cols=40  Identities=20%  Similarity=0.475  Sum_probs=34.6

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcch
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTL   67 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~   67 (305)
                      ..+.||+++|.|. |.||+.+|+.|...|++|++++++...
T Consensus       250 ~~LaGKtVgVIG~-G~IGr~vA~rL~a~Ga~ViV~e~dp~~  289 (476)
T PTZ00075        250 VMIAGKTVVVCGY-GDVGKGCAQALRGFGARVVVTEIDPIC  289 (476)
T ss_pred             CCcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchh
Confidence            4678999999996 579999999999999999998776543

>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1

Probab=93.30  E-value=0.3  Score=39.73  Aligned_cols=42  Identities=26%  Similarity=0.350  Sum_probs=32.5

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhH
Q 021960           29 LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVL   71 (305)
Q Consensus        29 l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~   71 (305)
                      +...+++|+| +|-.|...++.|...|++|++.+.........
T Consensus        18 ~~p~~vvv~G-~G~vg~gA~~~~~~lGa~v~~~d~~~~~~~~~   59 (168)
T PF01262_consen   18 VPPAKVVVTG-AGRVGQGAAEIAKGLGAEVVVPDERPERLRQL   59 (168)
T ss_dssp             E-T-EEEEES-TSHHHHHHHHHHHHTT-EEEEEESSHHHHHHH
T ss_pred             CCCeEEEEEC-CCHHHHHHHHHHhHCCCEEEeccCCHHHHHhh
Confidence            3467899999 48999999999999999999998876655443

4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....

>PRK13581 D-3-phosphoglycerate dehydrogenase; Provisional

Probab=93.29  E-value=0.88  Score=44.20  Aligned_cols=37  Identities=30%  Similarity=0.257  Sum_probs=33.7

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecC
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVE   64 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~   64 (305)
                      ..+.||++.|.|- |.||+.+|+.|...|++|+..++.
T Consensus       136 ~~l~gktvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~  172 (526)
T PRK13581        136 VELYGKTLGIIGL-GRIGSEVAKRAKAFGMKVIAYDPY  172 (526)
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCC
Confidence            4789999999996 789999999999999999999874

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=93.27  E-value=0.25  Score=39.98  Aligned_cols=81  Identities=17%  Similarity=0.157  Sum_probs=52.1

Q ss_pred             CEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc----CC-----CCeEEEEecCCCHHHHHHHHHH--H
Q 021960           32 KVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL----AP-----APVTFVHCDVSLEEDIENLINS--T  100 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~----~~-----~~v~~~~~D~~d~~~i~~~~~~--~  100 (305)
                      +++-+.|- |-.|..+++.|++.|++|.+.+|+.+..+.+.+..    ..     .+..++..=+.|.++++.++..  +
T Consensus         2 ~~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~~s~~e~~~~~dvvi~~v~~~~~v~~v~~~~~i   80 (163)
T PF03446_consen    2 MKIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVADSPAEAAEQADVVILCVPDDDAVEAVLFGENI   80 (163)
T ss_dssp             BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEESSHHHHHHHBSEEEE-SSSHHHHHHHHHCTTH
T ss_pred             CEEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhhhhhhhHhhcccceEeecccchhhhhhhhhhHH
Confidence            46777885 89999999999999999999999876665544321    00     1123444557888889888876  5


Q ss_pred             HHhcCCccEEEEc
Q 021960          101 VSRYGRLDILYNN  113 (305)
Q Consensus       101 ~~~~g~id~li~n  113 (305)
                      .....+=.++|.+
T Consensus        81 ~~~l~~g~iiid~   93 (163)
T PF03446_consen   81 LAGLRPGKIIIDM   93 (163)
T ss_dssp             GGGS-TTEEEEE-
T ss_pred             hhccccceEEEec
Confidence            5443323344443

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>PRK08655 prephenate dehydrogenase; Provisional

Probab=93.23  E-value=0.78  Score=43.44  Aligned_cols=35  Identities=23%  Similarity=0.443  Sum_probs=31.8

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEEecCcch
Q 021960           33 VAIITGGARGIGEAAVRLFARHGAKVVIADVEDTL   67 (305)
Q Consensus        33 ~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~   67 (305)
                      ++.|.||+|.+|.++++.|.+.|++|.+.+|+...
T Consensus         2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~   36 (437)
T PRK08655          2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKK   36 (437)
T ss_pred             EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHH
Confidence            68999999999999999999999999999987654

>PLN02827 Alcohol dehydrogenase-like

Probab=93.20  E-value=0.67  Score=42.91  Aligned_cols=79  Identities=19%  Similarity=0.260  Sum_probs=50.4

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCe-EEEEecCcchhhhHhhhcCCCCeEEEEecCCCH-HHHHHHHHHHHHhcCCc
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAK-VVIADVEDTLGSVLASTLAPAPVTFVHCDVSLE-EDIENLINSTVSRYGRL  107 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~-vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~-~~i~~~~~~~~~~~g~i  107 (305)
                      .|+++||.|+ |++|..++..+...|+. |+.+++++.+.+.+. .+.-.  .+  +|..+. ++..+.++++..  +.+
T Consensus       193 ~g~~VlV~G~-G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a~-~lGa~--~~--i~~~~~~~~~~~~v~~~~~--~g~  264 (378)
T PLN02827        193 KGSSVVIFGL-GTVGLSVAQGAKLRGASQIIGVDINPEKAEKAK-TFGVT--DF--INPNDLSEPIQQVIKRMTG--GGA  264 (378)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH-HcCCc--EE--EcccccchHHHHHHHHHhC--CCC
Confidence            4889999985 89999999888888985 666777766655443 23211  11  344331 234443333322  259


Q ss_pred             cEEEEcCCC
Q 021960          108 DILYNNAGV  116 (305)
Q Consensus       108 d~li~nag~  116 (305)
                      |.+|.+.|.
T Consensus       265 d~vid~~G~  273 (378)
T PLN02827        265 DYSFECVGD  273 (378)
T ss_pred             CEEEECCCC
Confidence            999999884

>COG0027 PurT Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) [Nucleotide transport and metabolism]

Probab=93.17  E-value=0.51  Score=42.01  Aligned_cols=69  Identities=13%  Similarity=0.175  Sum_probs=50.8

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhh-hHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 021960           31 GKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGS-VLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDI  109 (305)
Q Consensus        31 ~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~-~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~  109 (305)
                      .++++..| ||-+|+.++..+-+.|..|+.++|=...-. ..+       -..+.+|..|.+.++.++++.     ++|.
T Consensus        12 a~kvmLLG-SGELGKEvaIe~QRLG~eViAVDrY~~APAmqVA-------hrs~Vi~MlD~~al~avv~re-----kPd~   78 (394)
T COG0027          12 ATKVMLLG-SGELGKEVAIEAQRLGVEVIAVDRYANAPAMQVA-------HRSYVIDMLDGDALRAVVERE-----KPDY   78 (394)
T ss_pred             CeEEEEec-CCccchHHHHHHHhcCCEEEEecCcCCChhhhhh-------hheeeeeccCHHHHHHHHHhh-----CCCe
Confidence            35677777 799999999999999999999998543221 111       223567999999999888765     5666


Q ss_pred             EEE
Q 021960          110 LYN  112 (305)
Q Consensus       110 li~  112 (305)
                      +|-
T Consensus        79 IVp   81 (394)
T COG0027          79 IVP   81 (394)
T ss_pred             eee
Confidence            653

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=93.17  E-value=4.2  Score=36.84  Aligned_cols=119  Identities=18%  Similarity=0.211  Sum_probs=65.5

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCC-eEEEEecCcchhhhHhh-h-----cCCCCeEEEEecCCCHHHHHHHHHHHHH
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGA-KVVIADVEDTLGSVLAS-T-----LAPAPVTFVHCDVSLEEDIENLINSTVS  102 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~-~vv~~~r~~~~~~~~~~-~-----~~~~~v~~~~~D~~d~~~i~~~~~~~~~  102 (305)
                      +.+++.|.|| |.+|..++..++..|. .++++++++........ .     ..+....+..  .+|.+.          
T Consensus         5 ~~~KI~IIGa-G~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~--~~d~~~----------   71 (321)
T PTZ00082          5 KRRKISLIGS-GNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIG--TNNYED----------   71 (321)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEE--CCCHHH----------
Confidence            4468999995 8899999999999995 89999987764321110 0     0111111211  133221          


Q ss_pred             hcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC-CCCEEEEecccc
Q 021960          103 RYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINR-GGGCIISTASVA  171 (305)
Q Consensus       103 ~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~isS~~  171 (305)
                       ...-|+||.++|.....+  ..-.+++.   .+.+..|+.    +.+.+.+.+.+. +.+.++++|-..
T Consensus        72 -l~~aDiVI~tag~~~~~~--~~~~~~~r---~~~l~~n~~----i~~~i~~~i~~~~p~a~~iv~sNP~  131 (321)
T PTZ00082         72 -IAGSDVVIVTAGLTKRPG--KSDKEWNR---DDLLPLNAK----IMDEVAEGIKKYCPNAFVIVITNPL  131 (321)
T ss_pred             -hCCCCEEEECCCCCCCCC--CCcCCCCH---HHHHHHHHH----HHHHHHHHHHHHCCCeEEEEecCcH
Confidence             126899999998753211  10111232   333444543    345555555444 345677777544

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=93.16  E-value=0.43  Score=41.36  Aligned_cols=37  Identities=27%  Similarity=0.460  Sum_probs=30.9

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCC-eEEEEecCc
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGA-KVVIADVED   65 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~-~vv~~~r~~   65 (305)
                      .+.+.+|+|.|+ ||+|..+++.|+..|. ++.+++.+.
T Consensus        21 ~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~   58 (240)
T TIGR02355        21 ALKASRVLIVGL-GGLGCAASQYLAAAGVGNLTLLDFDT   58 (240)
T ss_pred             HHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCc
Confidence            567889999996 7999999999999997 577776653

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent

Probab=93.14  E-value=1.1  Score=41.51  Aligned_cols=110  Identities=8%  Similarity=0.063  Sum_probs=61.7

Q ss_pred             CEEEEecCCCchHHHHHHHHHHcCC-e----EE--EE--ecCcchhhhHhhhcCCC------CeEEEEecCCCHHHHHHH
Q 021960           32 KVAIITGGARGIGEAAVRLFARHGA-K----VV--IA--DVEDTLGSVLASTLAPA------PVTFVHCDVSLEEDIENL   96 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~g~-~----vv--~~--~r~~~~~~~~~~~~~~~------~v~~~~~D~~d~~~i~~~   96 (305)
                      -+|.|+|++|.+|.++|..|+..+. .    +.  ++  ++++...+-....+...      ++.+. .  .+.      
T Consensus        45 ~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~i~-~--~~y------  115 (387)
T TIGR01757        45 VNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVSIG-I--DPY------  115 (387)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceEEe-c--CCH------
Confidence            4799999999999999999998764 2    33  33  55554433222211110      11110 1  121      


Q ss_pred             HHHHHHhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHc-C-CCCEEEEecc
Q 021960           97 INSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMIN-R-GGGCIISTAS  169 (305)
Q Consensus        97 ~~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~-~~~~iv~isS  169 (305)
                           +.+..-|++|..||....     +  ..+.   .+.+..|..    +++.+.+.+.+ . ..+.+|++|-
T Consensus       116 -----~~~kdaDIVVitAG~prk-----p--g~tR---~dll~~N~~----I~k~i~~~I~~~a~~~~iviVVsN  171 (387)
T TIGR01757       116 -----EVFEDADWALLIGAKPRG-----P--GMER---ADLLDINGQ----IFADQGKALNAVASKNCKVLVVGN  171 (387)
T ss_pred             -----HHhCCCCEEEECCCCCCC-----C--CCCH---HHHHHHHHH----HHHHHHHHHHHhCCCCeEEEEcCC
Confidence                 222468999999997421     1  1233   334555554    34555555555 3 4567777774

This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.

>PTZ00117 malate dehydrogenase; Provisional

Probab=93.14  E-value=2.2  Score=38.56  Aligned_cols=37  Identities=24%  Similarity=0.333  Sum_probs=31.6

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcC-CeEEEEecCcch
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHG-AKVVIADVEDTL   67 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g-~~vv~~~r~~~~   67 (305)
                      ..+++.|+|| |.+|..++..++..| ..++++++++..
T Consensus         4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~   41 (319)
T PTZ00117          4 KRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGV   41 (319)
T ss_pred             CCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCcc
Confidence            4568999997 899999999999988 689999987654

>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1

Probab=93.12  E-value=0.26  Score=37.81  Aligned_cols=66  Identities=21%  Similarity=0.309  Sum_probs=45.9

Q ss_pred             chHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcC--CccEEEEcCCC
Q 021960           42 GIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYG--RLDILYNNAGV  116 (305)
Q Consensus        42 giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g--~id~li~nag~  116 (305)
                      |||...+..+...|++|+++++++.+.+.+.+. .   .. ..+|-++.+    +.+++.+..+  .+|++|.+.|.
T Consensus         1 ~vG~~a~q~ak~~G~~vi~~~~~~~k~~~~~~~-G---a~-~~~~~~~~~----~~~~i~~~~~~~~~d~vid~~g~   68 (130)
T PF00107_consen    1 GVGLMAIQLAKAMGAKVIATDRSEEKLELAKEL-G---AD-HVIDYSDDD----FVEQIRELTGGRGVDVVIDCVGS   68 (130)
T ss_dssp             HHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHT-T---ES-EEEETTTSS----HHHHHHHHTTTSSEEEEEESSSS
T ss_pred             ChHHHHHHHHHHcCCEEEEEECCHHHHHHHHhh-c---cc-ccccccccc----cccccccccccccceEEEEecCc
Confidence            689999988889999999999998887766543 2   11 224554433    4444444443  59999999983

1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=93.09  E-value=0.34  Score=40.61  Aligned_cols=36  Identities=22%  Similarity=0.394  Sum_probs=29.6

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCe-EEEEecC
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAK-VVIADVE   64 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~-vv~~~r~   64 (305)
                      .+++++|+|.|+ ||+|.++++.|+..|.. +.+++.+
T Consensus        18 ~L~~s~VlIiG~-gglG~evak~La~~GVg~i~lvD~d   54 (197)
T cd01492          18 RLRSARILLIGL-KGLGAEIAKNLVLSGIGSLTILDDR   54 (197)
T ss_pred             HHHhCcEEEEcC-CHHHHHHHHHHHHcCCCEEEEEECC
Confidence            556789999985 67999999999999985 7777644

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>PRK08223 hypothetical protein; Validated

Probab=93.09  E-value=0.35  Score=42.88  Aligned_cols=81  Identities=22%  Similarity=0.181  Sum_probs=49.0

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCC-eEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCC
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGA-KVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGR  106 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~-~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~  106 (305)
                      .|.+..|+|.|+ ||+|..+++.|+..|. ++.++|.+.-....+     +.++.+-.-|+.. ..++.+.+++.+..+.
T Consensus        24 kL~~s~VlIvG~-GGLGs~va~~LA~aGVG~i~lvD~D~Ve~SNL-----nRQ~l~~~~diG~-~Kve~a~~~l~~iNP~   96 (287)
T PRK08223         24 RLRNSRVAIAGL-GGVGGIHLLTLARLGIGKFTIADFDVFELRNF-----NRQAGAMMSTLGR-PKAEVLAEMVRDINPE   96 (287)
T ss_pred             HHhcCCEEEECC-CHHHHHHHHHHHHhCCCeEEEEeCCCcchhcc-----ccccCcChhHCCC-cHHHHHHHHHHHHCCC
Confidence            556889999996 7999999999999998 577776653322211     1222222334432 3344444555555555


Q ss_pred             ccEEEEcCC
Q 021960          107 LDILYNNAG  115 (305)
Q Consensus       107 id~li~nag  115 (305)
                      +++-.++..
T Consensus        97 v~V~~~~~~  105 (287)
T PRK08223         97 LEIRAFPEG  105 (287)
T ss_pred             CEEEEEecc
Confidence            666655543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	305
2bgk_A	278	X-Ray Structure Of Apo-Secoisolariciresinol Dehydro		2e-56
1iy8_A	267	Crystal Structure Of Levodione Reductase Length = 2		5e-38
1nff_A	260	Crystal Structure Of Rv2002 Gene Product From Mycob		1e-33
2uvd_A	246	The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier		3e-32
1nfr_A	260	Rv2002 Gene Product From Mycobacterium Tuberculosis		2e-31
4fn4_A	254	Short-chain Nad(h)-dependent Dehydrogenase/reductas		4e-30
4dqx_A	277	Crystal Structure Of A Short Chain Dehydrogenase Fr		4e-30
3tox_A	280	Crystal Structure Of A Short Chain Dehydrogenase In		2e-29
1hdc_A	254	Mechanism Of Inhibition Of 3alpha,20beta-Hydroxyste		3e-29
2hsd_A	253	The Refined Three-Dimensional Structure Of 3alpha,2		9e-29
1zjy_A	251	Structure Of R-Specific Alcohol Dehydrogenase (Muta		2e-28
1k2w_A	256	Crystal Structure Of Sorbitol Dehydrogenase From R.		1e-27
1nxq_A	251	Crystal Structure Of R-Alcohol Dehydrogenase (Radh)		2e-27
2cfc_A	250	Structural Basis For Stereo Selectivity In The (R)-		2e-26
1spx_A	278	Crystal Structure Of Glucose Dehydrogenase Of Caeno		3e-26
1uls_A	245	Crystal Structure Of Tt0140 From Thermus Thermophil		4e-26
2zat_A	260	Crystal Structure Of A Mammalian Reductase Length =		5e-26
2d1y_A	256	Crystal Structure Of Tt0321 From Thermus Thermophil		5e-26
1hxh_A	253	Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID D		5e-26
3o4r_A	261	Crystal Structure Of Human DehydrogenaseREDUCTASE (		6e-26
2ag5_A	246	Crystal Structure Of Human Dhrs6 Length = 246		1e-25
3vtz_A	269	Structure Of Thermoplasma Volcanium Aldohexose Dehy		1e-25
3oec_A	317	Crystal Structure Of Carveol Dehydrogenase From Myc		1e-25
2a4k_A	263	3-Oxoacyl-[acyl Carrier Protein] Reductase From The		1e-25
2hq1_A	247	Crystal Structure Of Orf 1438 A Putative GlucoseRIB		2e-25
3t7c_A	299	Crystal Structure Of Carveol Dehydrogenase From Myc		4e-25
3gvc_A	277	Crystal Structure Of Probable Short-Chain Dehydroge		5e-25
3sj7_A	252	Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) F		5e-25
1zem_A	262	Crystal Structure Of Nad+-Bound Xylitol Dehydrogena		1e-24
4e6p_A	259	Crystal Structure Of A Probable Sorbitol Dehydrogen		1e-24
3tzh_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		2e-24
4dml_A	269	3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Syn		2e-24
3tzq_B	271	Crystal Structure Of A Short-Chain Type Dehydrogena		2e-24
3uwr_A	286	Crystal Structure Of Carveol Dehydrogenase From Myc		3e-24
3r1i_A	276	Crystal Structure Of A Short-Chain Type Dehydrogena		3e-24
3rsh_A	251	Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reduc		4e-24
1vl8_A	267	Crystal Structure Of Gluconate 5-dehydrogenase (tm0		5e-24
3tzc_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		1e-23
3tzk_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		2e-23
2c07_A	285	Oxoacyl-Acp Reductase Of Plasmodium Falciparum Leng		2e-23
3qiv_A	253	Crystal Structure Of A Putative Short-Chain Dehydro		3e-23
3u09_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		3e-23
2ew8_A	249	Crystal Structure Of The (s)-specific 1-phenylethan		4e-23
3ak4_A	263	Crystal Structure Of Nadh-Dependent Quinuclidinone		5e-23
3ftp_A	270	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		5e-23
3uve_A	286	Crystal Structure Of Carveol Dehydrogenase ((+)-Tra		5e-23
1wmb_A	260	Crystal Structure Of Nad Dependent D-3-Hydroxybutyl		5e-23
1rwb_A	261	Cooperative Effect Of Two Surface Amino Acid Mutati		6e-23
3tsc_A	277	Crystal Structure Of Short Chain Dehydrogenase Map_		6e-23
1yde_A	270	Crystal Structure Of Human Retinal Short-Chain Dehy		6e-23
3v2h_A	281	The Crystal Structure Of D-Beta-Hydroxybutyrate Deh		9e-23
3pgx_A	280	Crystal Structure Of A Putative Carveol Dehydrogena		1e-22
1g6k_A	261	Crystal Structure Of Glucose Dehydrogenase Mutant E		1e-22
2ztm_A	260	T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase L		1e-22
3f9i_A	249	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		1e-22
3cxr_A	291	Crystal Structure Of Gluconate 5-Dehydrogase From S		2e-22
1gco_A	261	Crystal Structure Of Glucose Dehydrogenase Complexe		2e-22
1gee_A	261	Crystal Structure Of Glucose Dehydrogenase Mutant Q		2e-22
2ztu_A	260	T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase C		2e-22
2gdz_A	267	Crystal Structure Of 15-Hydroxyprostaglandin Dehydr		2e-22
3n74_A	261	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		3e-22
1i01_A	244	Crystal Structure Of Beta-Ketoacyl [acyl Carrier Pr		4e-22
3osu_A	246	Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Pro		5e-22
2et6_A	604	(3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candid		6e-22
3rih_A	293	Crystal Structure Of A Putative Short Chain Dehydro		7e-22
1geg_A	256	Cryatal Structure Analysis Of Meso-2,3-Butanediol D		9e-22
1q7c_A	244	The Structure Of Betaketoacyl-[acp] Reductase Y151f		1e-21
3aus_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		1e-21
3ay7_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		2e-21
3ay6_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		2e-21
3grp_A	266	2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl-		2e-21
3sx2_A	278	Crystal Structure Of A Putative 3-Ketoacyl-(Acyl-Ca		3e-21
3pk0_A	262	Crystal Structure Of Short-Chain DehydrogenaseREDUC		4e-21
3ijr_A	291	2.05 Angstrom Resolution Crystal Structure Of A Sho		4e-21
4iin_A	271	Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Car		5e-21
3qlj_A	322	Crystal Structure Of A Short Chain Dehydrogenase Fr		5e-21
2q2q_A	255	Structure Of D-3-Hydroxybutyrate Dehydrogenase From		6e-21
3enn_A	249	2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN		7e-21
3i3o_A	291	2.06 Angstrom Resolution Crystal Structure Of A Sho		8e-21
4fgs_A	273	Crystal Structure Of A Probable Dehydrogenase Prote		1e-20
2nm0_A	253	Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl		1e-20
3v1t_C	462	Crystal Structure Of A Putative Ketoacyl Reductase		1e-20
3q6i_A	446	Crystal Structure Of Fabg4 And Coenzyme Binary Comp		1e-20
3m1l_A	432	Crystal Strucutre Of A C-Terminal Trunacted Mutant		1e-20
4fw8_A	454	Crystal Structure Of Fabg4 Complexed With Coenzyme		1e-20
3lls_A	475	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		1e-20
1edo_A	244	The X-Ray Structure Of Beta-Keto Acyl Carrier Prote		1e-20
1xkq_A	280	Crystal Structure Of Short-Chain DehydrogenaseREDUC		2e-20
2pd6_A	264	Structure Of Human Hydroxysteroid Dehydrogenase Typ		2e-20
3emk_A	246	2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN		2e-20
2yz7_A	260	X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase F		3e-20
3o38_A	266	Crystal Structure Of A Short Chain Dehydrogenase Fr		3e-20
4e4y_A	244	The Crystal Structure Of A Short Chain Dehydrogenas		5e-20
3awd_A	260	Crystal Structure Of Gox2181 Length = 260		6e-20
3s55_A	281	Crystal Structure Of A Putative Short-Chain Dehydro		7e-20
1xhl_A	297	Crystal Structure Of Putative Tropinone Reductase-I		8e-20
1xq1_A	266	X-Ray Structure Of Putative Tropinone Reducatse Fro		9e-20
3op4_A	248	Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carr		1e-19
2dtd_A	264	Structure Of Thermoplasma Acidophilum Aldohexose De		3e-19
2wdz_A	254	Crystal Structure Of The Short Chain Dehydrogenase		4e-19
1ahi_A	255	7 Alpha-Hydroxysteroid Dehydrogenase Complexed With		4e-19
2zk7_A	257	Structure Of A C-Terminal Deletion Mutant Of Thermo		4e-19
1u7t_A	261	Crystal Structure Of AbadHSD10 WITH A BOUND INHIBIT		5e-19
1so8_A	261	Abeta-bound Human Abad Structure [also Known As 3-h		5e-19
2o23_A	265	The Structure Of Wild-Type Human Hadh2 (17beta-Hydr		5e-19
1doh_A	283	Structure Of Trihydroxynaphthalene Reductase In Com		5e-19
1e3w_A	261	Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co		5e-19
1e3s_A	261	Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co		5e-19
1e6w_A	260	Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co		5e-19
3gaf_A	256	2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid De		6e-19
3u0b_A	454	Crystal Structure Of An Oxidoreductase From Mycobac		6e-19
3v2g_A	271	Crystal Structure Of A DehydrogenaseREDUCTASE FROM		6e-19
2fwm_X	250	Crystal Structure Of E. Coli Enta, A 2,3-Dihydrodih		7e-19
2pnf_A	248	Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-		7e-19
1ybv_A	283	Structure Of Trihydroxynaphthalene Reductase In Com		9e-19
3nug_A	247	Crystal Structure Of Wild Type Tetrameric Pyridoxal		1e-18
4g81_D	255	Crystal Structure Of A Hexonate Dehydrogenase Ortho		3e-18
3csd_B	281	Actinorhodin Polyketide Ketoreductase Mutant P94l B		3e-18
2rhr_B	277	P94l Actinorhodin Ketordeuctase Mutant, With Nadph		4e-18
1ja9_A	274	Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalen		4e-18
4b79_A	242	The Aeropath Project And Pseudomonas Aeruginosa Hig		6e-18
3ndr_A	247	Crystal Structure Of Tetrameric Pyridoxal 4-Dehydro		7e-18
4dc0_A	281	Crystal Structure Of F189w Actinorhodin Polyketide		2e-17
3a28_C	258	Crystal Structure Of L-2,3-Butanediol Dehydrogenase		2e-17
2rh4_A	277	Actinorhodin Ketoreductase, Actkr, With Nadph And I		2e-17
1w4z_A	281	Structure Of Actinorhodin Polyketide (Actiii) Reduc		2e-17
4dc1_A	281	Crystal Structure Of Y202f Actinorhodin Polyketide		2e-17
2ehd_A	234	Crystal Structure Analysis Of Oxidoreductase Length		2e-17
1x7g_A	261	Actinorhodin Polyketide Ketoreductase, Act Kr, With		2e-17
4dbz_A	281	Crystal Structure Of V151l Actinorhodin Polyketide		2e-17
4hp8_A	247	Crystal Structure Of A Putative 2-Deoxy-D-Gluconate		2e-17
2cf2_E	226	Architecture Of Mammalian Fatty Acid Synthase Lengt		2e-17
4afn_A	269	Crystal Structure Of 3-ketoacyl-(acyl-carrier-prote		3e-17
3v8b_A	283	Crystal Structure Of A 3-Ketoacyl-Acp Reductase Fro		5e-17
3lyl_A	247	Structure Of 3-Oxoacyl-Acylcarrier Protein Reductas		6e-17
2ph3_A	245	Crystal Structure Of 3-oxoacyl-[acyl Carrier Protei		8e-17
1yxm_A	303	Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa		8e-17
4e3z_A	272	Crystal Structure Of A Oxidoreductase From Rhizobiu		9e-17
3rkr_A	262	Crystal Structure Of A Metagenomic Short-Chain Oxid		1e-16
3i4f_A	264	Structure Of Putative 3-oxoacyl-reductase From Baci		2e-16
3ioy_A	319	Structure Of Putative Short-Chain Dehydrogenase (Sa		2e-16
1bdb_A	277	Cis-Biphenyl-2,3-Dihydrodiol-2,3-Dehydrogenase From		2e-16
3oml_A	613	Structure Of Full-Length Peroxisomal Multifunctiona		2e-16
3uf0_A	273	Crystal Structure Of A Putative Nad(P) Dependent Gl		2e-16
2y93_A	281	Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2		3e-16
1x1e_A	239	Crystal Structure Of Tt0495 Protein From Thermus Th		4e-16
4egf_A	266	Crystal Structure Of A L-Xylulose Reductase From My		4e-16
1zbq_A	327	Crystal Structure Of Human 17-beta-hydroxysteroid D		4e-16
3is3_A	270	Crystal Structure Of 17beta-Hydroxysteroid Dehydrog		5e-16
3r3s_A	294	Structure Of The Ygha Oxidoreductase From Salmonell		5e-16
4fc6_A	277	Studies On Dcr Shed New Light On Peroxisomal Beta-O		5e-16
3gk3_A	269	Crystal Structure Of Acetoacetyl-Coa Reductase From		8e-16
3ppi_A	281	Crystal Structure Of 3-Hydroxyacyl-Coa Dehydrogenas		8e-16
3ctm_A	279	Crystal Structure Of A Carbonyl Reductase From Cand		9e-16
1ae1_A	273	Tropinone Reductase-I Complex With Nadp Length = 27		1e-15
3tpc_A	257	Crystal Structure Of A Hypothtical Protein Sma1452		1e-15
3itd_A	270	Crystal Structure Of An Inactive 17beta-Hydroxyster		1e-15
4ibo_A	271	Crystal Structure Of A Putative Gluconate Dehydroge		3e-15
4iiu_A	267	Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Car		4e-15
1xg5_A	279	Structure Of Human Putative Dehydrogenase Mgc4172 I		5e-15
3g1t_A	258	Crystal Structure Of Short Chain Dehydrogenase From		6e-15
3ai1_A	263	The Crystal Structure Of L-Sorbose Reductase From G		8e-15
1ipe_A	259	Tropinone Reductase-Ii Complexed With Nadph Length		1e-14
4iqg_C	271	Crystal Structure Of Bpro0239 Oxidoreductase From P		1e-14
2ae2_A	260	Tropinone Reductase-Ii Complexed With Nadp+ And Pse		1e-14
3tjr_A	301	Crystal Structure Of A Rv0851c Ortholog Short Chain		1e-14
3f5q_A	262	Crystal Structure Of Putative Short Chain Dehydroge		2e-14
1gz6_A	319	(3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat		2e-14
3ai3_A	263	The Crystal Structure Of L-Sorbose Reductase From G		2e-14
3oic_A	258	Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl		2e-14
3gdf_A	267	Crystal Structure Of The Nadp-Dependent Mannitol De		6e-14
3un1_A	260	Crystal Structure Of An Oxidoreductase From Sinorhi		6e-14
3jq7_A	288	Crystal Structure Of Pteridine Reductase 1 (Ptr1) F		6e-14
3bmc_A	288	Structure Of Pteridine Reductase 1 (Ptr1) From Tryp		7e-14
3jq7_B	288	Crystal Structure Of Pteridine Reductase 1 (Ptr1) F		7e-14
3bmc_B	288	Structure Of Pteridine Reductase 1 (Ptr1) From Tryp		7e-14
3pxx_A	287	Crystal Structure Of Carveol Dehydrogenase From Myc		7e-14
3svt_A	281	Structure Of A Short-Chain Type DehydrogenaseREDUCT		8e-14
1cyd_A	244	Carbonyl Reductase Complexed With Nadph And 2-Propa		9e-14
3sju_A	279	Hedamycin Polyketide Ketoreductase Bound To Nadph L		1e-13
2c7v_A	268	Structure Of Trypanosoma Brucei Pteridine Reductase		1e-13
2wd7_B	268	Pteridine Reductase 1 (Ptr1) From Trypanosoma Bruce		1e-13
2wd7_A	268	Pteridine Reductase 1 (Ptr1) From Trypanosoma Bruce		1e-13
3f1l_A	252	The 0.95 A Structure Of An Oxidoreductase, Ycik Fro		3e-13
3ksu_A	262	Crystal Structure Of Short-Chain Dehydrogenase From		3e-13
3imf_A	257	1.99 Angstrom Resolution Crystal Structure Of A Sho		3e-13
3f5s_A	255	Crystal Structure Of Putatitve Short Chain Dehydrog		4e-13
3d3w_B	245	Structure Of L-Xylulose Reductase With Bound Coenzy		4e-13
1pr9_A	244	Human L-Xylulose Reductase Holoenzyme Length = 244		6e-13
4eso_A	255	Crystal Structure Of A Putative Oxidoreductase Prot		6e-13
3vc7_A	254	Crystal Structure Of A Putative Oxidoreductase From		6e-13
3d3w_A	244	Structure Of L-Xylulose Reductase With Bound Coenzy		6e-13
3ged_A	247	Fingerprint And Structural Analysis Of A Apo Scor E		9e-13
1uzl_A	247	Maba From Mycobacterium Tuberculosis Length = 247		1e-12
3edm_A	259	Crystal Structure Of A Short Chain Dehydrogenase Fr		1e-12
3icc_A	255	Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Car		2e-12
2ntn_A	267	Crystal Structure Of Maba-c60v/g139a/s144l Length =		2e-12
3asu_A	248	Crystal Structure Of Serine Dehydrogenase From Esch		2e-12
3iah_A	256	Crystal Structure Of Short Chain Dehydrogenase (yci		3e-12
3afm_A	258	Crystal Structure Of Aldose Reductase A1-R Responsi		3e-12
3p19_A	266	Improved Nadph-Dependent Blue Fluorescent Protein L		7e-12
1uzm_A	247	Maba From Mycobacterium Tuberculosis Length = 247		7e-12
1yb1_A	272	Crystal Structure Of Human 17-Beta-Hydroxysteroid D		9e-12
3tfo_A	264	Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Car		1e-11
3f1k_A	252	Crystal Structure Of Ycik From E. Coli, An Oxidored		1e-11
3u5t_A	267	The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr		2e-11
2z1n_A	260	Crystal Structure Of Ape0912 From Aeropyrum Pernix		2e-11
3e9q_A	273	Crystal Structure Of The Short Chain Dehydrogenase		4e-11
2qq5_A	260	Crystal Structure Of Human Sdr Family Member 1 Leng		5e-11
2jap_A	247	Clavulanic Acid Dehydrogenase: Structural And Bioch		2e-10
2jah_A	247	Biochemical And Structural Analysis Of The Clavulan		2e-10
2nwq_A	272	Short Chain Dehydrogenase From Pseudomonas Aerugino		3e-10
3m1a_A	281	The Crystal Structure Of A Short-Chain Dehydrogenas		3e-10
2b4q_A	276	Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex		4e-10
1o5i_A	249	Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protei		5e-10
3tl3_A	257	Structure Of A Short-Chain Type DehydrogenaseREDUCT		5e-10
4dyv_A	272	Crystal Structure Of A Short-Chain DehydrogenaseRED		6e-10
4gkb_A	258	Crystal Structure Of A Short Chain Dehydrogenase Ho		7e-10
3uxy_A	266	The Crystal Structure Of Short Chain Dehydrogenase		1e-09
2bd0_A	244	Chlorobium Tepidum Sepiapterin Reductase Complexed		2e-09
1mxh_A	276	Crystal Structure Of Substrate Complex Of Putative		2e-09
3tn7_A	257	Crystal Structure Of Short-Chain Alcohol Dehydrogen		2e-09
3t4x_A	267	Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDU		3e-09
3ezl_A	256	Crystal Structure Of Acetyacetyl-Coa Reductase From		3e-09
3e03_A	274	Crystal Structure Of A Putative Dehydrogenase From		4e-09
2p91_A	285	Crystal Structure Of Enoyl-[acyl-Carrier-Protein] R		4e-09
1mxf_A	276	Crystal Structure Of Inhibitor Complex Of Putative		4e-09
1uay_A	242	Crystal Structure Of Type Ii 3-Hydroxyacyl-Coa Dehy		7e-09
3l77_A	235	X-Ray Structure Alcohol Dehydrogenase From Archaeon		7e-09
3ucx_A	264	The Structure Of A Short Chain Dehydrogenase From M		2e-08
3rku_A	287	Substrate Fingerprint And The Structure Of Nadp+ De		2e-08
4dry_A	281	The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr		6e-08
1h5q_A	265	Mannitol Dehydrogenase From Agaricus Bisporus Lengt		1e-07
4da9_A	280	Crystal Structure Of Putative Short-Chain Dehydroge		2e-07
1w6u_A	302	Structure Of Human Decr Ternary Complex Length = 30		3e-07
4eit_A	276	Crystal Structure Of An Enoyl-(Acyl Carrier Protein		7e-07
3kvo_A	346	Crystal Structure Of The Catalytic Domain Of Human		8e-07
3nyw_A	250	Crystal Structure Of A Betaketoacyl-[acp] Reductase		1e-06
3grk_A	293	Crystal Structure Of Short Chain Dehydrogenase Redu		3e-06
1p33_A	289	Pteridine Reductase From Leishmania Tarentolae Comp		3e-06
4h15_A	261	Crystal Structure Of A Short Chain Alcohol Dehydrog		4e-06
1iol_A	327	Estrogenic 17-beta Hydroxysteroid Dehydrogenase Com		7e-06
3k2e_A	296	Crystal Structure Of Enoyl-(Acyl-Carrier-Protein) R		7e-06
1fdw_A	327	Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 M		1e-05
1fds_A	327	Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 C		1e-05
1equ_A	327	Type 1 17-Beta Hydroxysteroid Dehydrogenase Equilin		1e-05
1fdu_A	327	Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 M		1e-05
1a27_A	289	Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 C		1e-05
3g49_A	277	N-(Pyridin-2-Yl) Arylsulfonamide Inhibitors Of 11b-		1e-05
1xse_A	295	Crystal Structure Of Guinea Pig 11beta-Hydroxystero		2e-05
3dwf_A	276	Crystal Structure Of The Guinea Pig 11beta-Hydroxys		2e-05
1w73_A	302	Binary Structure Of Human Decr Solved By Semet Sad.		2e-05
3lz6_A	263	Guinea Pig 11beta Hydroxysteroid Dehydrogenase With		2e-05
4imr_A	275	Crystal Structure Of 3-oxoacyl (acyl-carrier-protei		3e-05
1y5m_A	276	The Crystal Structure Of Murine 11b-Hydroxysteroid		5e-05
3oif_A	266	Crystal Structure Of Enoyl-Acp Reductases I (Fabi)		7e-05
2pd3_A	275	Crystal Structure Of The Helicobacter Pylori Enoyl-		1e-04
3ch6_A	286	Crystal Structure Of 11beta-Hsd1 Double Mutant (L26		1e-04
2bel_A	283	Structure Of Human 11-Beta-Hydroxysteroid Dehydroge		1e-04
1mg5_A	255	Crystal Structure Of Drosophila Melanogaster Alcoho		1e-04
3d5q_A	272	Crystal Structure Of 11b-Hsd1 In Complex With Triaz		2e-04
1xu7_A	286	Crystal Structure Of The Interface Open Conformatio		2e-04
2ilt_A	275	Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) W		2e-04
4hfr_A	272	Human 11beta-Hydroxysteroid Dehydrogenase Type 1 In		2e-04
3pdj_A	273	Crystal Structure Of Human 11-Beta-Hydroxysteroid D		2e-04
2irw_A	264	Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) W		2e-04
2qio_A	256	X-Ray Structure Of Enoyl-Acyl Carrier Protein Reduc		2e-04
4bb6_A	292	Free-Wilson And Structural Approaches To Co-Optimis		2e-04
2rbe_A	275	The Discovery Of 2-Anilinothiazolones As 11beta-Hsd		2e-04
3ojf_A	257	Crystal Structure Of The Bacillus Cereus Enoyl-Acyl		2e-04
4bb5_A	292	Free-Wilson And Structural Approaches To Co-Optimis		2e-04
2o2s_A	315	The Structure Of T. Gondii Enoyl Acyl Carrier Prote		2e-04
3i1j_A	247	Structure Of A Putative Short Chain Dehydrogenase F		3e-04
3lf1_A	265	Apo Structure Of The Short Chain Oxidoreductase Q9h		3e-04
3kzv_A	254	The Crystal Structure Of A Cytoplasmic Protein With		3e-04
3gmd_A	264	Structure-Based Design Of 7-Azaindole-Pyrrolidines		3e-04
2ptg_A	319	Crystal Structure Of Eimeria Tenella Enoyl Reductas		3e-04
3f4b_A	323	Crystal Structure Of Plasmodium Berghei Enoyl-Acyl-		4e-04
3rj5_A	254	Structure Of Alcohol Dehydrogenase From Drosophila		5e-04
2qhx_A	328	Structure Of Pteridine Reductase From Leishmania Ma		6e-04
1e7w_A	291	One Active Site, Two Modes Of Reduction Correlate T		7e-04
4ixt_A	254	Structure Of A 37-fold Mutant Of Halohydrin Dehalog		8e-04
1e92_A	288	Pteridine Reductase 1 From Leishmania Major Complex		8e-04
1w0c_A	307	Inhibition Of Leishmania Major Pteridine Reductase		8e-04
1fjh_A	257	The Crystal Structure Of 3-Alpha-Hydroxysteroid Deh		8e-04

>pdb|2BGK|A Chain A, X-Ray Structure Of Apo-Secoisolariciresinol Dehydrogenase Length = 278

Iteration: 1
 Score =  215 bits (548), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 130/275 (47%), Positives = 179/275 (65%), Gaps = 23/275 (8%)
Query: 25  SHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL-APAPVTFV 83
           S  RL+ KVAIITGGA GIGE   +LF R+GAKVVIAD+ D  G  + + + +P  ++FV
Sbjct: 10  STNRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFV 69
Query: 84  HCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVK 143
           HCDV+ +ED+ NL+++T++++G+LDI++ N GVL       SI++   ++F  VM +NV 
Sbjct: 70  HCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPY--SILEAGNEDFKRVMDINVY 127
Query: 144 GMALGIKHAARVMINRGGGCIISTASVAGVMGGLG-PHAYTASKHAIVGLTKNAACELGR 202
           G  L  KHAARVMI    G I+ TAS++    G G  H YTA+KHA++GLT +   ELG 
Sbjct: 128 GAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLCTELGE 187
Query: 203 YGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKG 262
           YGIRVNC+SP+ VA+ +L +                FG+ S +    +EE      NLKG
Sbjct: 188 YGIRVNCVSPYIVASPLLTDV---------------FGVDSSR----VEELAHQAANLKG 228
Query: 263 TTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
           T LR++D+A+A  YLA DES+YVSG NLV+DGG T
Sbjct: 229 TLLRAEDVADAVAYLAGDESKYVSGLNLVIDGGYT 263

>pdb|1IY8|A Chain A, Crystal Structure Of Levodione Reductase Length = 267

Iteration: 1
 Score =  154 bits (390), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 94/272 (34%), Positives = 146/272 (53%), Gaps = 23/272 (8%)
Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVE-DTLGSVLASTLAPAP---VTFV 83
           R   +V +ITGG  G+G A     A  GAK+ + DV  + L +  A+ L  AP   V   
Sbjct: 10  RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTT 69
Query: 84  HCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVK 143
             DVS E  +E  + +T  R+GR+D  +NNAG+ G Q   +S   F A EFD V+ +N++
Sbjct: 70  VADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTES---FTAAEFDKVVSINLR 126
Query: 144 GMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRY 203
           G+ LG++   ++M  +G G +++TASV G+ G      Y A+KH +VGLT+N+A E GRY
Sbjct: 127 GVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRY 186
Query: 204 GIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGT 263
           GIR+N I+P  + T M+ N+ +               +  +   +  EEF+    N    
Sbjct: 187 GIRINAIAPGAIWTPMVENSMKQ--------------LDPENPRKAAEEFIQ--VNPSKR 230
Query: 264 TLRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
              + +IA    +L SD++ YV+   + +DGG
Sbjct: 231 YGEAPEIAAVVAFLLSDDASYVNATVVPIDGG 262

>pdb|1NFF|A Chain A, Crystal Structure Of Rv2002 Gene Product From Mycobacterium Tuberculosis Length = 260

Iteration: 1
 Score =  140 bits (352), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 100/268 (37%), Positives = 141/268 (52%), Gaps = 34/268 (12%)
Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDV 87
           RL GKVA+++GGARG+G + VR     GAKVV  D+ D  G  +A+ LA A   +VH DV
Sbjct: 4   RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADA-ARYVHLDV 62
Query: 88  SLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMAL 147
           +     +  +++ V+ +G L +L NNAG+L       +I D+   E+  ++ VN+ G+ L
Sbjct: 63  TQPAQWKAAVDTAVTAFGGLHVLVNNAGIL----NIGTIEDYALTEWQRILDVNLTGVFL 118
Query: 148 GIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRV 207
           GI+   + M   G G II+ +S+ G+ G +  H YTA+K A+ GLTK+ A ELG  GIRV
Sbjct: 119 GIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRV 178
Query: 208 NCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRS 267
           N I P  V T M         D   ED                  F + LG         
Sbjct: 179 NSIHPGLVKTPMT--------DWVPED-----------------IFQTALGR----AAEP 209
Query: 268 KDIAEAALYLASDESRYVSGHNLVVDGG 295
            +++   +YLASDES Y +G   VVDGG
Sbjct: 210 VEVSNLVVYLASDESSYSTGAEFVVDGG 237

>pdb|2UVD|A Chain A, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis (Ba3989) Length = 246

Iteration: 1
 Score =  135 bits (340), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 95/277 (34%), Positives = 144/277 (51%), Gaps = 43/277 (15%)
Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIA---------DVEDTLGSVLASTLAPAP 79
           L+GKVA++TG +RGIG A     A+ GA VV+          +V D +  + +  +A   
Sbjct: 2   LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIA--- 58
Query: 80  VTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMR 139
              V  DV+  ED+ N++  TV  +G++DIL NNAGV     K   ++    +E+D V+ 
Sbjct: 59  ---VRADVANAEDVTNMVKQTVDVFGQVDILVNNAGV----TKDNLLMRMKEEEWDTVIN 111
Query: 140 VNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACE 199
            N+KG+ L  K  +R M+ +  G I++ ASV GV G  G   Y A+K  ++GLTK +A E
Sbjct: 112 TNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGNPGQANYVAAKAGVIGLTKTSAKE 171
Query: 200 LGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGN 259
           L    I VN I+P  +AT M      +  D   + E +   IP+ +            G 
Sbjct: 172 LASRNITVNAIAPGFIATDM-----TDVLDENIKAEMLKL-IPAAQ-----------FG- 213
Query: 260 LKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGV 296
                  ++DIA A  + ASD+S+Y++G  L VDGG+
Sbjct: 214 ------EAQDIANAVTFFASDQSKYITGQTLNVDGGM 244

>pdb|1NFR|A Chain A, Rv2002 Gene Product From Mycobacterium Tuberculosis Length = 260

Iteration: 1
 Score =  132 bits (333), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 98/268 (36%), Positives = 137/268 (51%), Gaps = 34/268 (12%)
Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDV 87
           RL GKVA+++GGARG G + VR     GAKVV  D+ D  G   A+ LA A   +VH DV
Sbjct: 4   RLTGKVALVSGGARGXGASHVRAXVAEGAKVVFGDILDEEGKAXAAELADA-ARYVHLDV 62
Query: 88  SLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMAL 147
           +     +  +++ V+ +G L +L NNAG+L       +I D+   E+  ++ VN+ G+ L
Sbjct: 63  TQPAQWKAAVDTAVTAFGGLHVLVNNAGIL----NIGTIEDYALTEWQRILDVNLTGVFL 118
Query: 148 GIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRV 207
           GI+   +     G G II+ +S+ G+ G +  H YTA+K A+ GLTK+ A ELG  GIRV
Sbjct: 119 GIRAVVKPXKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRV 178
Query: 208 NCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRS 267
           N I P  V T           D   ED                  F + LG         
Sbjct: 179 NSIHPGLVKTPXT--------DWVPED-----------------IFQTALGR----AAEP 209
Query: 268 KDIAEAALYLASDESRYVSGHNLVVDGG 295
            +++   +YLASDES Y +G   VVDGG
Sbjct: 210 VEVSNLVVYLASDESSYSTGAEFVVDGG 237

>pdb|4FN4|A Chain A, Short-chain Nad(h)-dependent Dehydrogenase/reductase From Sulfolobus Acidocaldarius Length = 254

Iteration: 1
 Score =  128 bits (321), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 88/275 (32%), Positives = 141/275 (51%), Gaps = 25/275 (9%)
Query: 25  SHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADV-EDTLGSVLASTLAPAP-VTF 82
           S++ L+ KV I+TG   GIG A  + FA + + VV  ++ ED L  ++         V  
Sbjct: 1   SYQSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLG 60
Query: 83  VHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNV 142
           V  DVS ++D+E  +  T   Y R+D+L NNAG++        + D   + ++ V+ VN+
Sbjct: 61  VKADVSKKKDVEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAEVSD---ELWERVLAVNL 117
Query: 143 KGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGR 202
                  +    +M+ +G G I++TAS+AG+ GG     YT +KH ++GLT++ A   G 
Sbjct: 118 YSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGGFAGAPYTVAKHGLIGLTRSIAAHYGD 177
Query: 203 YGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKG 262
            GIR   + P  V T        N G G  +        PS+  +R + + +S    L  
Sbjct: 178 QGIRAVAVLPGTVKT--------NIGLGSSK--------PSELGMRTLTKLMS----LSS 217
Query: 263 TTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
                +DIA   ++LASDE+ +V+G  +VVDGG+T
Sbjct: 218 RLAEPEDIANVIVFLASDEASFVNGDAVVVDGGLT 252

>pdb|4DQX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Rhizobium Etli Cfn 42 Length = 277

Iteration: 1
 Score =  128 bits (321), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 91/269 (33%), Positives = 134/269 (49%), Gaps = 27/269 (10%)
Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVS 88
           L  +V I+TGG  GIG A   LFA++GA VV+ADV +     +A+ +       V  DVS
Sbjct: 25  LNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFG-VRVDVS 83
Query: 89  LEEDIENLINSTVSRYGRLDILYNNAG--VLGNQRKHKSIIDFDADEFDNVMRVNVKGMA 146
             +D E+ +  T +++GR+D+L NNAG    GN      ++    + +D +  VNVKG+ 
Sbjct: 84  SAKDAESXVEKTTAKWGRVDVLVNNAGFGTTGN------VVTIPEETWDRIXSVNVKGIF 137
Query: 147 LGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIR 206
           L  K+   V    GGG II+T S           AY ASK AI  LT+  A +  + GIR
Sbjct: 138 LCSKYVIPVXRRNGGGSIINTTSYTATSAIADRTAYVASKGAISSLTRAXAXDHAKEGIR 197
Query: 207 VNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLR 266
           VN ++P  + +      +  + D  +     N                  + +  GT   
Sbjct: 198 VNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFN---------------ARAVXDRXGT--- 239
Query: 267 SKDIAEAALYLASDESRYVSGHNLVVDGG 295
           +++IAEA L+LASD SR+ +G  L VDGG
Sbjct: 240 AEEIAEAXLFLASDRSRFATGSILTVDGG 268

>pdb|3TOX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase In Complex With Nad(P) From Sinorhizobium Meliloti 1021 Length = 280

Iteration: 1
 Score =  126 bits (316), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 101/284 (35%), Positives = 137/284 (48%), Gaps = 42/284 (14%)
Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVI--------ADVEDTLGSVLASTLAPAP 79
           RLEGK+AI+TG + GIG AA  LFAR GAKVV+        A++ D +        A   
Sbjct: 5   RLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAA--- 61
Query: 80  VTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMR 139
              +  DV  E   E L+   V R+G LD  +NNAG LG   +  S+     + +   + 
Sbjct: 62  ---LAGDVGDEALHEALVELAVRRFGGLDTAFNNAGALGAMGEISSL---SVEGWRETLD 115
Query: 140 VNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGL-GPHAYTASKHAIVGLTKNAAC 198
            N+    L  K+    +   GGG +  T+S  G   G  G   Y ASK  ++GL +  A 
Sbjct: 116 TNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTAGFAGVAPYAASKAGLIGLVQALAV 175
Query: 199 ELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFG-IP-SQKEVRKMEEFVSG 256
           ELG  GIRVN + P G                   D   NF  +P +  E R    FV G
Sbjct: 176 ELGARGIRVNALLPGGT------------------DTPANFANLPGAAPETRG---FVEG 214
Query: 257 LGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTSR 300
           L  LK    R ++IAEAALYLASD + +V+G  L+ DGG + ++
Sbjct: 215 LHALK-RIARPEEIAEAALYLASDGASFVTGAALLADGGASVTK 257

>pdb|1HDC|A Chain A, Mechanism Of Inhibition Of 3alpha,20beta-Hydroxysteroid Dehydrogenase By A Licorice-Derived Steroidal Inhibitor Length = 254

Iteration: 1
 Score =  125 bits (314), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 99/271 (36%), Positives = 137/271 (50%), Gaps = 30/271 (11%)
Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVS 88
           L GK  IITGGARG+G  A R     GA+VV+ADV D  G+  A  L  A   + H DV+
Sbjct: 3   LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDA-ARYQHLDVT 61
Query: 89  LEEDIENLINSTVSRYGRLDILYNNAGV-LGNQRKHKSIIDFDADEFDNVMRVNVKGMAL 147
           +EED + ++      +G +D L NNAG+  G   + +S+     + F  V+ +N+ G+ +
Sbjct: 62  IEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESV-----ERFRKVVEINLTGVFI 116
Query: 148 GIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRV 207
           G+K     M + GGG I++ +S AG+MG     +Y ASK  + GL+K AA ELG   IRV
Sbjct: 117 GMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIRV 176
Query: 208 NCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRS 267
           N + P    T M        G+G   +  M                   +GN  G     
Sbjct: 177 NSVHPGMTYTPMTAETGIRQGEGNYPNTPMGR-----------------VGNEPG----- 214
Query: 268 KDIAEAALYLASDESRYVSGHNLVVDGGVTT 298
            +IA A + L SD S YV+G  L VDGG TT
Sbjct: 215 -EIAGAVVKLLSDTSSYVTGAELAVDGGWTT 244

>pdb|2HSD|A Chain A, The Refined Three-Dimensional Structure Of 3alpha,20beta- Hydroxysteroid Dehydrogenase And Possible Roles Of The Residues Conserved In Short-Chain Dehydrogenases Length = 253

Iteration: 1
 Score =  124 bits (310), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 97/271 (35%), Positives = 134/271 (49%), Gaps = 31/271 (11%)
Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVS 88
           L GK  IITGGARG+G  A R     GA+VV+ADV D  G+  A  L  A   + H DV+
Sbjct: 3   LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDA-ARYQHLDVT 61
Query: 89  LEEDIENLINSTVSRYGRLDILYNNAGV-LGNQRKHKSIIDFDADEFDNVMRVNVKGMAL 147
           +EED + ++      +G +D L NNAG+  G   + +S+     + F  V+ +N+ G+ +
Sbjct: 62  IEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESV-----ERFRKVVEINLTGVFI 116
Query: 148 GIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRV 207
           G+K     M + GGG I++ +S AG+MG     +Y ASK  + GL+K AA ELG   IRV
Sbjct: 117 GMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIRV 176
Query: 208 NCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRS 267
           N + P    T M        G+G   +  M                        G     
Sbjct: 177 NSVHPGMTYTPMTAETGIRQGEGNYPNTPM------------------------GRVGEP 212
Query: 268 KDIAEAALYLASDESRYVSGHNLVVDGGVTT 298
            +IA A + L SD S YV+G  L VDGG TT
Sbjct: 213 GEIAGAVVKLLSDTSSYVTGAELAVDGGWTT 243

>pdb|1ZJY|A Chain A, Structure Of R-Specific Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus Brevis In Complex With Phenylethanol And Nadh Length = 251

Iteration: 1
 Score =  123 bits (308), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 94/274 (34%), Positives = 136/274 (49%), Gaps = 31/274 (11%)
Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL-APAPVTFVHCD 86
           RL+GKVAIITGG  GIG A    F   GAKV+I D    +G   A ++  P  + F   D
Sbjct: 3   RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITDRHSDVGEKAAKSVGTPDQIQFFQHD 62
Query: 87  VSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMA 146
            S E+    L ++T   +G +  L NNAG+  N    KS+ +    E+  ++ VN+ G+ 
Sbjct: 63  SSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVN----KSVEETTTAEWRKLLAVNLDGVF 118
Query: 147 LGIKHAARVMINRG-GGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAA--CELGRY 203
            G +   + M N+G G  II+ +S+ G +G     AY ASK A+  ++K+AA  C L  Y
Sbjct: 119 FGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDY 178
Query: 204 GIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGT 263
            +RVN + P  + T ++        D    +E M     SQ+    M           G 
Sbjct: 179 DVRVNTVHPGYIKTPLV-------DDLPGAEEAM-----SQRTKTPM-----------GH 215
Query: 264 TLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
                DIA   +YLAS+ES++ +G   VVDGG T
Sbjct: 216 IGEPNDIAYICVYLASNESKFATGSEFVVDGGYT 249

>pdb|1K2W|A Chain A, Crystal Structure Of Sorbitol Dehydrogenase From R. Sphaeroides Length = 256

Iteration: 1
 Score =  120 bits (300), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 89/269 (33%), Positives = 135/269 (50%), Gaps = 19/269 (7%)
Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDV 87
           RL+GK A+ITG ARGIG A    + R GA+V IAD+        A+ + PA    +  DV
Sbjct: 2   RLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACA-IALDV 60
Query: 88  SLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMAL 147
           + +  I+  +   + R+G +DIL NNA +         I++   + +D +  +NV G   
Sbjct: 61  TDQASIDRCVAELLDRWGSIDILVNNAALF----DLAPIVEITRESYDRLFAINVSGTLF 116
Query: 148 GIKHAARVMINRG-GGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIR 206
            ++  AR MI  G GG II+ AS AG  G      Y A+K A++ LT++A   L R+GI 
Sbjct: 117 MMQAVARAMIAGGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLIRHGIN 176
Query: 207 VNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLR 266
           VN I+P GV        W    DG +        +P  ++ R++   V       G   R
Sbjct: 177 VNAIAP-GVVDG---EHW----DGVDAKFADYENLPRGEKKRQVGAAVP-----FGRMGR 223
Query: 267 SKDIAEAALYLASDESRYVSGHNLVVDGG 295
           ++D+   A++LA+ E+ Y+      VDGG
Sbjct: 224 AEDLTGMAIFLATPEADYIVAQTYNVDGG 252

>pdb|1NXQ|A Chain A, Crystal Structure Of R-Alcohol Dehydrogenase (Radh) (Apoenyzme) From Lactobacillus Brevis Length = 251

Iteration: 1
 Score =  119 bits (299), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 93/274 (33%), Positives = 135/274 (49%), Gaps = 31/274 (11%)
Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL-APAPVTFVHCD 86
           RL+GKVAIITGG  GIG A    F   GAKV+I      +G   A ++  P  + F   D
Sbjct: 3   RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHD 62
Query: 87  VSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMA 146
            S E+    L ++T   +G +  L NNAG+  N    KS+ +    E+  ++ VN+ G+ 
Sbjct: 63  SSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVN----KSVEETTTAEWRKLLAVNLDGVF 118
Query: 147 LGIKHAARVMINRG-GGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAA--CELGRY 203
            G +   + M N+G G  II+ +S+ G +G     AY ASK A+  ++K+AA  C L  Y
Sbjct: 119 FGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDY 178
Query: 204 GIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGT 263
            +RVN + P  + T ++        D    +E M     SQ+    M           G 
Sbjct: 179 DVRVNTVHPGYIKTPLV-------DDLPGAEEAM-----SQRTKTPM-----------GH 215
Query: 264 TLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
                DIA   +YLAS+ES++ +G   VVDGG T
Sbjct: 216 IGEPNDIAYICVYLASNESKFATGSEFVVDGGYT 249

>pdb|2CFC|A Chain A, Structural Basis For Stereo Selectivity In The (R)- And (S)- Hydroxypropylethane Thiosulfonate Dehydrogenases Length = 250

Iteration: 1
 Score =  115 bits (289), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 92/272 (33%), Positives = 138/272 (50%), Gaps = 32/272 (11%)
Query: 32  KVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPA---PVTFVHCDVS 88
           +VAI+TG + G G A    F   G +V   D+        A T   A    V  V  DV+
Sbjct: 3   RVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVA 62
Query: 89  LEEDIENLINSTVSRYGRLDILYNNAGVLGNQRK---HKSIIDFDADEFDNVMRVNVKGM 145
            E D+   I +T+ ++G +D+L NNAG+ GN      H + ++    +FD VM VNV+G+
Sbjct: 63  DEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVE----QFDKVMAVNVRGI 118
Query: 146 ALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGI 205
            LG +     M+ +G G I++ ASVA ++   G  AYT SK A++ LTK+ A +    GI
Sbjct: 119 FLGCRAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTSKGAVLQLTKSVAVDYAGSGI 178
Query: 206 RVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL 265
           R N + P  + T M    WR   D  E  + +   IP QKE+              GT  
Sbjct: 179 RCNAVCPGMIETPM--TQWRL--DQPELRDQVLARIP-QKEI--------------GT-- 217
Query: 266 RSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
            +  +A+A ++LA +++ YV+G  LV+DG  T
Sbjct: 218 -AAQVADAVMFLAGEDATYVNGAALVMDGAYT 248

>pdb|1SPX|A Chain A, Crystal Structure Of Glucose Dehydrogenase Of Caenorhabditis Elegans In The Apo-Form Length = 278

Iteration: 1
 Score =  115 bits (288), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 93/280 (33%), Positives = 142/280 (50%), Gaps = 33/280 (11%)
Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIA-----DVEDTLGSVLASTLAPAPVTF 82
           R   KVAIITG + GIG A   LFAR GAKV I       +E+T   +LA+ ++   V  
Sbjct: 3   RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNS 62
Query: 83  VHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNV 142
           V  DV+ +   + ++++T+ ++G+LDIL NNAG      + K+      + +D  + +N+
Sbjct: 63  VVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNL 122
Query: 143 KGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHA------YTASKHAIVGLTKNA 196
           + + + +   A   ++   G I++ +S+A      G HA      Y+ +K AI   T+N 
Sbjct: 123 RSV-IALTKKAVPHLSSTKGEIVNISSIAS-----GLHATPDFPYYSIAKAAIDQYTRNT 176
Query: 197 ACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSG 256
           A +L ++GIRVN ISP  VAT         S  G  E+    F       +  M+E V  
Sbjct: 177 AIDLIQHGIRVNSISPGLVATGF------GSAMGMPEETSKKF----YSTMATMKECVPA 226
Query: 257 LGNLKGTTLRSKDIAEAALYLASDE-SRYVSGHNLVVDGG 295
                G   + +DIAE   +LA  + S Y+ GH LVVDGG
Sbjct: 227 -----GVMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGG 261

>pdb|1ULS|A Chain A, Crystal Structure Of Tt0140 From Thermus Thermophilus Hb8 Length = 245

Iteration: 1
 Score =  115 bits (287), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 90/270 (33%), Positives = 134/270 (49%), Gaps = 32/270 (11%)
Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDV 87
           RL+ K  +ITG A GIG A + LFA+ GA++V  D+E+      A  +   PV     DV
Sbjct: 2   RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVV---XDV 58
Query: 88  SLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMAL 147
           +    +E      ++  GRLD + + AG+  +    K  ++    +++ V+RVN+ G  L
Sbjct: 59  ADPASVERGFAEALAHLGRLDGVVHYAGITRDNFHWKXPLE----DWELVLRVNLTGSFL 114
Query: 148 GIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRV 207
             K A+     +  G I+ TAS    +G LG   Y AS   +VGLT+  A ELGR+GIRV
Sbjct: 115 VAKAASEAXREKNPGSIVLTASRV-YLGNLGQANYAASXAGVVGLTRTLALELGRWGIRV 173
Query: 208 NCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRS 267
           N ++P  + T                       +P +  VR+     + LG   G  L  
Sbjct: 174 NTLAPGFIETRXTAK------------------VPEK--VREKAIAATPLGR-AGKPL-- 210
Query: 268 KDIAEAALYLASDESRYVSGHNLVVDGGVT 297
            ++A AAL+L SDES +++G  L VDGG T
Sbjct: 211 -EVAYAALFLLSDESSFITGQVLFVDGGRT 239

>pdb|2ZAT|A Chain A, Crystal Structure Of A Mammalian Reductase Length = 260

Iteration: 1
 Score =  114 bits (286), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 96/285 (33%), Positives = 138/285 (48%), Gaps = 44/285 (15%)
Query: 26  HRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIA-----DVEDTLGSVLASTLAPAPV 80
            + LE KVA++T    GIG A  R  A+ GA VV++     +V+ T+ ++    L+   V
Sbjct: 9   RKPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLS---V 65
Query: 81  TFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGV---LGNQRKHKSIIDFDADEFDNV 137
           T   C V   ED E L+   V+ +G +DIL +NA V    GN      IID   + +D +
Sbjct: 66  TGTVCHVGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGN------IIDATEEVWDKI 119
Query: 138 MRVNVKGMALGIKHAARVMINRGGGCIISTASVAGV--MGGLGPHAYTASKHAIVGLTKN 195
           + VNVK   L  K     M  RGGG ++  +SV        LGP  Y  SK A++GLTKN
Sbjct: 120 LHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGP--YNVSKTALLGLTKN 177
Query: 196 AACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVS 255
            A EL    IRVNC++P  + T+     W +                ++KE  K    + 
Sbjct: 178 LAVELAPRNIRVNCLAPGLIKTNFSQVLWMDK---------------ARKEYMKESLRIR 222
Query: 256 GLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTSR 300
            LGN        +D A    +L S+++ Y++G  +VV GG T SR
Sbjct: 223 RLGN-------PEDCAGIVSFLCSEDASYITGETVVVGGG-TASR 259

>pdb|2D1Y|A Chain A, Crystal Structure Of Tt0321 From Thermus Thermophilus Hb8 Length = 256

Iteration: 1
 Score =  114 bits (286), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 88/274 (32%), Positives = 132/274 (48%), Gaps = 26/274 (9%)
Query: 31  GKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLE 90
           GK  ++TGGARGIG A  + FAR GA V + D+    G  +A  +  A   F   D+  E
Sbjct: 6   GKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPE-GKEVAEAIGGA---FFQVDLEDE 61
Query: 91  EDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIK 150
            +    +       GR+D+L NNA +        S +     E+  V+ VN+        
Sbjct: 62  RERVRFVEEAAYALGRVDVLVNNAAIAA----PGSALTVRLPEWRRVLEVNLTAPMHLSA 117
Query: 151 HAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCI 210
            AAR M   GGG I++ ASV G+       AY ASK  +V LT++ A +L    IRVN +
Sbjct: 118 LAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAPLRIRVNAV 177
Query: 211 SPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSKDI 270
           +P  +AT  ++ A   S              P  +  R+  E +  L  L     + +++
Sbjct: 178 APGAIATEAVLEAIALS--------------PDPERTRRDWEDLHALRRLG----KPEEV 219
Query: 271 AEAALYLASDESRYVSGHNLVVDGGVTTSRNCVG 304
           AEA L+LAS+++ +++G  L VDGG+T S    G
Sbjct: 220 AEAVLFLASEKASFITGAILPVDGGMTASFMMAG 253

>pdb|1HXH|A Chain A, Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID Dehydrogenase Length = 253

Iteration: 1
 Score =  114 bits (286), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 91/273 (33%), Positives = 132/273 (48%), Gaps = 31/273 (11%)
Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDV 87
           RL+GKVA++TGGA G+G   V+L    GAKV  +D+ +  G  LA+ L    + FV  DV
Sbjct: 3   RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSM-FVRHDV 61
Query: 88  SLEEDIENLINSTVSRYGRLDILYNNAGVL--GNQRKHKSIIDFDADEFDNVMRVNVKGM 145
           S E D   ++ +   R G L++L NNAG+L  G+    +       ++F  ++++N + +
Sbjct: 62  SSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGR------LEDFSRLLKINTESV 115
Query: 146 ALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAA--CELGRY 203
            +G +     M    GG II+ ASV+  +       Y+ASK A+  LT+ AA  C    Y
Sbjct: 116 FIGCQQGIAAM-KETGGSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCRKQGY 174
Query: 204 GIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGT 263
            IRVN I P G+ T M                 M   +P  K V K         N  G 
Sbjct: 175 AIRVNSIHPDGIYTPM-----------------MQASLP--KGVSKEMVLHDPKLNRAGR 215
Query: 264 TLRSKDIAEAALYLASDESRYVSGHNLVVDGGV 296
               + IA+  L+LASDES  +SG  L  D  +
Sbjct: 216 AYMPERIAQLVLFLASDESSVMSGSELHADNSI 248

>pdb|3O4R|A Chain A, Crystal Structure Of Human DehydrogenaseREDUCTASE (SDR FAMILY) MEMBER 4 (Dhrs4) Length = 261

Iteration: 1
 Score =  114 bits (285), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 89/277 (32%), Positives = 135/277 (48%), Gaps = 34/277 (12%)
Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIA-----DVEDTLGSVLASTLAPAPVTFV 83
           L  KVA++T    GIG A  R  A+ GA VV++     +V+  + ++    L+   VT  
Sbjct: 13  LANKVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDQAVATLQGEGLS---VTGT 69
Query: 84  HCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVK 143
            C V   ED E L+ + V  +G +DIL +NA V        SI+D   + +D  + +NVK
Sbjct: 70  VCHVGKAEDRERLVATAVKLHGGIDILVSNAAV---NPFFGSIMDVTEEVWDKTLDINVK 126
Query: 144 GMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRY 203
             AL  K     M  RGGG ++  +S+A      G   Y  SK A++GLTK  A EL   
Sbjct: 127 APALMTKAVVPEMEKRGGGSVVIVSSIAAFSPSPGFSPYNVSKTALLGLTKTLAIELAPR 186
Query: 204 GIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGT 263
            IRVNC++P  + TS     W +    +E++E M   +     +R++ E           
Sbjct: 187 NIRVNCLAPGLIKTSFSRMLWMD----KEKEESMKETL----RIRRLGE----------- 227
Query: 264 TLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTSR 300
               +D A    +L S+++ Y++G  +VV GG T SR
Sbjct: 228 ---PEDCAGIVSFLCSEDASYITGETVVVGGG-TPSR 260

>pdb|2AG5|A Chain A, Crystal Structure Of Human Dhrs6 Length = 246

Iteration: 1
 Score =  114 bits (284), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 94/269 (34%), Positives = 142/269 (52%), Gaps = 30/269 (11%)
Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDV 87
           RL+GKV I+T  A+GIG+AA   FAR GAKV+  D+ ++    L     P   T V  DV
Sbjct: 3   RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKY--PGIQTRV-LDV 59
Query: 88  SLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMAL 147
           + ++ I+   N       RLD+L+N AG +     H +++D +  ++D  M +NV+ M L
Sbjct: 60  TKKKQIDQFANEV----ERLDVLFNVAGFV----HHGTVLDCEEKDWDFSMNLNVRSMYL 111
Query: 148 GIKHAARVMINRGGGCIISTASVA-GVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIR 206
            IK     M+ +  G II+ +SVA  V G +    Y+ +K A++GLTK+ A +  + GIR
Sbjct: 112 MIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIR 171
Query: 207 VNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLR 266
            NC+ P  V T  L    +  G+ E   E  N  +  QK                G    
Sbjct: 172 CNCVCPGTVDTPSLQERIQARGNPE---EARNDFLKRQK---------------TGRFAT 213
Query: 267 SKDIAEAALYLASDESRYVSGHNLVVDGG 295
           +++IA   +YLASDES YV+G+ +++DGG
Sbjct: 214 AEEIAMLCVYLASDESAYVTGNPVIIDGG 242

>pdb|3VTZ|A Chain A, Structure Of Thermoplasma Volcanium Aldohexose Dehydrogenase Length = 269

Iteration: 1
 Score =  113 bits (283), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 89/265 (33%), Positives = 136/265 (51%), Gaps = 26/265 (9%)
Query: 32  KVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEE 91
           KVAI+TGG+ GIG A V    R+GAKVV   +++     ++             DV+ EE
Sbjct: 15  KVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNVSDHF--------KIDVTNEE 66
Query: 92  DIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKH 151
           +++  +  T  +YGR+DIL NNAG+      H +  +     +  ++ VNV G  L  K+
Sbjct: 67  EVKEAVEKTTKKYGRIDILVNNAGIEQYSPLHLTPTEI----WRRIIDVNVNGSYLMAKY 122
Query: 152 AARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCIS 211
              VM+  G G II+ ASV          AY  SKHA++GLT++ A +     IR N + 
Sbjct: 123 TIPVMLAIGHGSIINIASVQSYAATKNAAAYVTSKHALLGLTRSVAIDYAP-KIRCNAVC 181
Query: 212 PFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSKDIA 271
           P  + T M++ A +    GE+E+             RK+EE+  G  +  G   R +++A
Sbjct: 182 PGTIMTPMVIKAAKMEV-GEDENAVE----------RKIEEW--GRQHPMGRIGRPEEVA 228
Query: 272 EAALYLASDESRYVSGHNLVVDGGV 296
           E   +LASD S +++G  L VDGG+
Sbjct: 229 EVVAFLASDRSSFITGACLTVDGGL 253

>pdb|3OEC|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Thermoresistibile Length = 317

Iteration: 1
 Score =  113 bits (283), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 91/290 (31%), Positives = 144/290 (49%), Gaps = 42/290 (14%)
Query: 28  RLEGKVAIITGGARGIGEA-AVRLFARHGAKVVIADV--------------EDTLGSVLA 72
           RL+GKVA ITG ARG G   AVRL A+ GA +V  D+              E+   +V  
Sbjct: 43  RLQGKVAFITGAARGQGRTHAVRL-AQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRL 101
Query: 73  STLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDAD 132
                  +     DV     ++ +++  ++ +G +DIL +N G+  NQ +  S+ D    
Sbjct: 102 VEEQGRRIIARQADVRDLASLQAVVDEALAEFGHIDILVSNVGI-SNQGEVVSLTD---Q 157
Query: 133 EFDNVMRVNVKGMALGIKHAARV----MINRG-GGCIISTASVAGVMGGLGPHAYTASKH 187
           ++ ++++ N+    +G  HA R     MI RG GG +I  +S  G+ G  G   Y ASKH
Sbjct: 158 QWSDILQTNL----IGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGAPGQSHYAASKH 213
Query: 188 AIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEV 247
            + GL  + A E+GR+ IRVN ++P  V T M +N           ++ +   +P  +  
Sbjct: 214 GVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALN-----------EKLLKMFLPHLENP 262
Query: 248 RKME--EFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
            + +  E  S L  L    +  +D++ A  +LASDE+RY+ G  + VDGG
Sbjct: 263 TREDAAELFSQLTLLPIPWVEPEDVSNAVAWLASDEARYIHGAAIPVDGG 312

>pdb|2A4K|A Chain A, 3-Oxoacyl-[acyl Carrier Protein] Reductase From Thermus Thermophilus Tt0137 Length = 263

Iteration: 1
 Score =  113 bits (283), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 91/269 (33%), Positives = 134/269 (49%), Gaps = 34/269 (12%)
Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDV 87
           RL GK  ++TG A GIG AA+ LFAR GA +V  D E+ L +   + L    +  V  DV
Sbjct: 3   RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVV-ADV 61
Query: 88  SLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSI-IDFDADEFDNVMRVNVKGMA 146
           S  + +E +    +  +GRL  + + AGV      H ++  +   + ++ V+RVN+ G  
Sbjct: 62  SDPKAVEAVFAEALEEFGRLHGVAHFAGV-----AHSALSWNLPLEAWEKVLRVNLTGSF 116
Query: 147 LGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIR 206
           L  + A  V+    GG ++ T SVAG +G  G   Y A K  +VGL +  A EL R G+R
Sbjct: 117 LVARKAGEVLEE--GGSLVLTGSVAG-LGAFGLAHYAAGKLGVVGLARTLALELARKGVR 173
Query: 207 VNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLR 266
           VN + P  + T M                    G+P      + E   S LG       R
Sbjct: 174 VNVLLPGLIQTPM------------------TAGLPPW--AWEQEVGASPLGRAG----R 209
Query: 267 SKDIAEAALYLASDESRYVSGHNLVVDGG 295
            +++A+AAL+L S+ES Y++G  L VDGG
Sbjct: 210 PEEVAQAALFLLSEESAYITGQALYVDGG 238

>pdb|2HQ1|A Chain A, Crystal Structure Of Orf 1438 A Putative GlucoseRIBITOL Dehydrogenase From Clostridium Thermocellum Length = 247

Iteration: 1
 Score =  113 bits (282), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 81/278 (29%), Positives = 140/278 (50%), Gaps = 43/278 (15%)
Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL---------APA 78
           +L+GK AI+TG +RG+G+A        GA +V+       GS  +++L         A  
Sbjct: 2   QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLN------GSPASTSLDATAEEFKAAGI 55
Query: 79  PVTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVM 138
            V     DV   ED+EN++ + +  +GR+DIL NNAG+     +   ++     ++D+V+
Sbjct: 56  NVVVAKGDVKNPEDVENMVKTAMDAFGRIDILVNNAGI----TRDTLMLKMSEKDWDDVL 111
Query: 139 RVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAAC 198
             N+K   L  K  +++M+ +  G II+  S+AG++G  G   Y ASK  ++G TK+ A 
Sbjct: 112 NTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGNAGQANYAASKAGLIGFTKSIAK 171
Query: 199 ELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLG 258
           E    GI  N ++P  + T M      +    + ++  +N  IP       ++ F     
Sbjct: 172 EFAAKGIYCNAVAPGIIKTDM-----TDVLPDKVKEMYLN-NIP-------LKRF----- 213
Query: 259 NLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGV 296
              GT    +++A    +LASD+S Y++G  + +DGG+
Sbjct: 214 ---GT---PEEVANVVGFLASDDSNYITGQVINIDGGL 245

>pdb|3T7C|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Bound To Nad Length = 299

Iteration: 1
 Score =  112 bits (279), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 88/285 (30%), Positives = 137/285 (48%), Gaps = 31/285 (10%)
Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSV---------LASTLAPA 78
           ++EGKVA ITG ARG G +     AR GA ++  DV   L  V         LA T+   
Sbjct: 25  KVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQV 84
Query: 79  P-----VTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADE 133
                 +     DV   + ++  ++  V++ GRLDI+  NA +     +   +   D   
Sbjct: 85  EALGRRIIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRM---DPKT 141
Query: 134 FDNVMRVNVKGMALGIKHA-ARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGL 192
           + +++ VN+ G  +  + A   +M  + GG I+ T+S+ G+ G      Y ASKH + GL
Sbjct: 142 WRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGAENIGNYIASKHGLHGL 201
Query: 193 TKNAACELGRYGIRVNCISPFGVATSMLVN--AWRNSGDGEEEDECMNFGIPSQKEVRKM 250
            +  A ELG   IRVN + P  VAT ML+N   +R      E     +F + S++     
Sbjct: 202 MRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVASRQ----- 256
Query: 251 EEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
                 +  L    +   DI+ A L+L SD++RY++G +L VDGG
Sbjct: 257 ------MHVLPIPYVEPADISNAILFLVSDDARYITGVSLPVDGG 295

>pdb|3GVC|A Chain A, Crystal Structure Of Probable Short-Chain Dehydrogenase- Reductase From Mycobacterium Tuberculosis Length = 277

Iteration: 1
 Score =  111 bits (278), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 88/271 (32%), Positives = 134/271 (49%), Gaps = 22/271 (8%)
Query: 25  SHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVH 84
           +H  L GKVAI+TG   GIG A  R  A  G  V+ AD++       A+ +         
Sbjct: 23  NHPDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAA-CR 81
Query: 85  CDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKG 144
            DVS E+ I  ++++ V+ +G +D L  NAGV+       S+ID   ++FD V+ +N++G
Sbjct: 82  VDVSDEQQIIAMVDACVAAFGGVDKLVANAGVV----HLASLIDTTVEDFDRVIAINLRG 137
Query: 145 MALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYG 204
             L  KHAA  MI RGGG I++ +S+AG +   G  AY  SK  I+ L++  A EL   G
Sbjct: 138 AWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVGGTGAYGMSKAGIIQLSRITAAELRSSG 197
Query: 205 IRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT 264
           IR N + P  V T M           ++    M  G       R M      +  L+G  
Sbjct: 198 IRSNTLLPAFVDTPM-----------QQTAMAMFDGALGAGGARSM------IARLQGRM 240
Query: 265 LRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
              +++A   ++L SD++  ++G   + DGG
Sbjct: 241 AAPEEMAGIVVFLLSDDASMITGTTQIADGG 271

>pdb|3SJ7|A Chain A, Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) From Staphylococcus Aureus Complex With Nadph Length = 252

Iteration: 1
 Score =  111 bits (278), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 81/268 (30%), Positives = 138/268 (51%), Gaps = 31/268 (11%)
Query: 32  KVAIITGGARGIGEAAVRLFARHGAKVVI--ADVEDTLGSVLASTLAPAPVTF-VHCDVS 88
           K A++TG +RGIG +     A  G  V +  A  ++   +V+    A    +F +  +V+
Sbjct: 11  KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVA 70
Query: 89  LEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALG 148
             ++++ +I   VS++G LD+L NNAG+     +   ++     E+D+V+  N+KG+   
Sbjct: 71  DADEVKAMIKEVVSQFGSLDVLVNNAGI----TRDNLLMRMKEQEWDDVIDTNLKGVFNC 126
Query: 149 IKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVN 208
           I+ A   M+ +  G II+ +SV G +G  G   Y A+K  ++GLTK+AA EL   GI VN
Sbjct: 127 IQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVN 186
Query: 209 CISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSK 268
            ++P G   S + +A       +E  E M   IP           ++  G       +  
Sbjct: 187 AVAP-GFIVSDMTDAL-----SDELKEQMLTQIP-----------LARFG-------QDT 222
Query: 269 DIAEAALYLASDESRYVSGHNLVVDGGV 296
           DIA    +LASD+++Y++G  + V+GG+
Sbjct: 223 DIANTVAFLASDKAKYITGQTIHVNGGM 250

>pdb|1ZEM|A Chain A, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase Length = 262

Iteration: 1
 Score =  110 bits (275), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 133/274 (48%), Gaps = 19/274 (6%)
Query: 27  RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADV-EDTLGSVLASTLAPAPVTFVH- 84
           ++  GKV ++TG    IG A     A  G  + + D+  + L    AS          + 
Sbjct: 3   KKFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYV 62
Query: 85  CDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKG 144
           CDV+ EE +   ++S V  +G++D L+NNAG  G       + D+ +D+F  V+ +NV G
Sbjct: 63  CDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQG---AFAPVQDYPSDDFARVLTINVTG 119
Query: 145 MALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYG 204
               +K  +R MI +  G I++TAS+AGV G     AY  SK AI+ LT+ AA +L  Y 
Sbjct: 120 AFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALDLAPYN 179
Query: 205 IRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT 264
           IRVN ISP  +    +   W    + + +     F    +   ++M      +G++    
Sbjct: 180 IRVNAISPGYMGPGFM---WERQVELQAKVGSQYFSTDPKVVAQQM------IGSVP--M 228
Query: 265 LRSKDIAE---AALYLASDESRYVSGHNLVVDGG 295
            R  DI E      +L  D+S +++G NL + GG
Sbjct: 229 RRYGDINEIPGVVAFLLGDDSSFMTGVNLPIAGG 262

>pdb|4E6P|A Chain A, Crystal Structure Of A Probable Sorbitol Dehydrogenase (Target Psi- 012078) From Sinorhizobium Meliloti 1021 Length = 259

Iteration: 1
 Score =  110 bits (275), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 92/270 (34%), Positives = 135/270 (50%), Gaps = 19/270 (7%)
Query: 27  RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCD 86
           +RLEGK A+ITG ARGIG A    + R GA V IAD++       A+ + PA    V  D
Sbjct: 4   KRLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYA-VQXD 62
Query: 87  VSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMA 146
           V+ ++ I+  I +TV   G LDIL NNA +         I++   + ++ +  +NV G  
Sbjct: 63  VTRQDSIDAAIAATVEHAGGLDILVNNAALF----DLAPIVEITRESYEKLFAINVAGTL 118
Query: 147 LGIKHAARVMINRG-GGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGI 205
             ++ AAR  I +G GG II+ AS AG  G      Y A+K A++ LT++A  +L ++ I
Sbjct: 119 FTLQAAARQXIAQGRGGKIINXASQAGRRGEALVAIYCATKAAVISLTQSAGLDLIKHRI 178
Query: 206 RVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL 265
            VN I+P GV             DGE  D         +   R  ++ + G     G   
Sbjct: 179 NVNAIAP-GVV------------DGEHWDGVDALFARYENRPRGEKKRLVGEAVPFGRXG 225
Query: 266 RSKDIAEAALYLASDESRYVSGHNLVVDGG 295
            ++D+   A++LAS ES Y+      VDGG
Sbjct: 226 TAEDLTGXAIFLASAESDYIVSQTYNVDGG 255

>pdb|3TZH|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(F187a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score =  109 bits (272), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 79/276 (28%), Positives = 133/276 (48%), Gaps = 29/276 (10%)
Query: 21  DAPPSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPV 80
           +A      LEGKVA++TG +RGIG+A   L A  GAKV+     ++    ++  L     
Sbjct: 2   NAMSQFMNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNG- 60
Query: 81  TFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRV 140
             +  +V+  E IE ++ +    +G +DIL NNAG+     +   ++    +E+ ++M  
Sbjct: 61  KGMALNVTNPESIEAVLKAITDEFGGVDILVNNAGIT----RDNLLMRMKEEEWSDIMET 116
Query: 141 NVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACEL 200
           N+  +    K   R M+ +  G II+  SV G MG  G   Y A+K  ++G TK+ A E+
Sbjct: 117 NLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREV 176
Query: 201 GRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNL 260
              G+ VN ++P  + T M           +E+       +P+ +           LG+ 
Sbjct: 177 ASRGVTVNTVAPGAIETDM------TKALNDEQRTATLAQVPAGR-----------LGD- 218
Query: 261 KGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGV 296
                  ++IA A  +LAS E+ Y++G  L V+GG+
Sbjct: 219 ------PREIASAVAFLASPEAAYITGETLHVNGGM 248

>pdb|4DML|A Chain A, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Synechococcus Elongatus Pcc 7942 Length = 269

Iteration: 1
 Score =  109 bits (272), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 83/275 (30%), Positives = 135/275 (49%), Gaps = 35/275 (12%)
Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVI---ADVEDTLGSVLASTLAPAPVTFVHC 85
           L  ++A++TG +RGIG A     A  GAKV +   +        V A   A      V  
Sbjct: 26  LTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKA 85
Query: 86  DVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGM 145
           DVS E ++E L  + + R+GRLD+L NNAG+     +   ++    D++ +V+ +N+ G+
Sbjct: 86  DVSQESEVEALFAAVIERWGRLDVLVNNAGI----TRDTLLLRMKRDDWQSVLDLNLGGV 141
Query: 146 ALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGI 205
            L  + AA++M+ +  G II+ ASV G MG  G   Y+A+K  ++GLTK  A EL   GI
Sbjct: 142 FLCSRAAAKIMLKQRSGRIINIASVVGEMGNPGQANYSAAKAGVIGLTKTVAKELASRGI 201
Query: 206 RVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL 265
            VN ++P  +AT M                       S+    K+ E +       G   
Sbjct: 202 TVNAVAPGFIATDM----------------------TSELAAEKLLEVIP-----LGRYG 234
Query: 266 RSKDIAEAALYLASD-ESRYVSGHNLVVDGGVTTS 299
            + ++A    +LA+D  + Y++G  + +DGG+  +
Sbjct: 235 EAAEVAGVVRFLAADPAAAYITGQVINIDGGLVMA 269

>pdb|3TZQ|B Chain B, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 271

Iteration: 1
 Score =  109 bits (272), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 85/268 (31%), Positives = 131/268 (48%), Gaps = 26/268 (9%)
Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVS 88
           LE KVAIITG   GIG    R+ AR GA+VV+AD+ +T  +  A+++    V  V  D++
Sbjct: 9   LENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHV-VDLT 67
Query: 89  LEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALG 148
            E  +  LI+ T+  +GRLDI+ NNA    +      +     D +D+   VN +G  L 
Sbjct: 68  NEVSVRALIDFTIDTFGRLDIVDNNAA--HSDPADMLVTQMTVDVWDDTFTVNARGTMLM 125
Query: 149 IKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVN 208
            K+A   +I+ GGG I++ +S           AY  +K AI  LT+  A + GR+G+R N
Sbjct: 126 CKYAIPRLISAGGGAIVNISSATAHAAYDMSTAYACTKAAIETLTRYVATQYGRHGVRCN 185
Query: 209 CISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSK 268
            I+P  V T  L                   G+P       ++ F +   +L G      
Sbjct: 186 AIAPGLVRTPRL-----------------EVGLPQP----IVDIFAT--HHLAGRIGEPH 222
Query: 269 DIAEAALYLASDESRYVSGHNLVVDGGV 296
           +IAE   +LASD + +++G  +  D G+
Sbjct: 223 EIAELVCFLASDRAAFITGQVIAADSGL 250

>pdb|3UWR|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Strain 104 Length = 286

Iteration: 1
 Score =  108 bits (271), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 92/286 (32%), Positives = 144/286 (50%), Gaps = 33/286 (11%)
Query: 28  RLEGKVAIITGGARGIGEA-AVRLFARHGAKVVIADVEDTLGSVLASTLAPAP------- 79
           R+ GKVA I+G ARG G + AVRL A+ GA ++  D+   + ++      P         
Sbjct: 12  RVAGKVAFISGAARGQGRSHAVRL-AQEGADIIAIDICGPIENLAYPHSTPEDLAETADL 70
Query: 80  -------VTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDAD 132
                  +     DV   E +++ ++S V + GRLDI+  NAGV  + RK   I D   +
Sbjct: 71  VKDLDRRIVTAQVDVRDFEALKSAVDSGVEQLGRLDIIVANAGVGTDGRKLHKIRD---N 127
Query: 133 EFDNVMRVNVKGMALGIKHAARVMINRG-GGCIISTASVAGVMGGLGPHAYTASKHAIVG 191
            + +++ +N+ G+   +K     +++ G GG I+ T+SV G         Y A+KH ++G
Sbjct: 128 VWQDMIDINLTGVWHTVKAGVPHVLSGGRGGSIVLTSSVGGRKAYPNTGHYIAAKHGVIG 187
Query: 192 LTKNAACELGRYGIRVNCISPFGVATSMLVN--AWRNSGDGEEEDECMNFGIPSQKEVRK 249
           L +  A ELG + IRVN + P  V+T+M++N   +R      E     +F   SQ     
Sbjct: 188 LMRAFAVELGPHMIRVNAVLPTQVSTTMVMNDQTFRLFRPDLENPGPDDFAPISQM---- 243
Query: 250 MEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
                  +  L    + + DI+ A L+LASDESRYV+G +L VD G
Sbjct: 244 -------MHTLPVPWVDASDISNAVLFLASDESRYVTGVSLPVDAG 282

>pdb|3R1I|A Chain A, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 276

Iteration: 1
 Score =  108 bits (271), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 83/274 (30%), Positives = 133/274 (48%), Gaps = 34/274 (12%)
Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPA--PVTFVHCD 86
           L GK A+ITG + GIG+     +A  GA+V +A        V+A  +A        + CD
Sbjct: 30  LSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCD 89
Query: 87  VSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMA 146
           V+  + +  +++      G +DI   NAG++  Q    +++D   +EF  +   NV G+ 
Sbjct: 90  VTQPDQVRGMLDQMTGELGGIDIAVCNAGIVSVQ----AMLDMPLEEFQRIQDTNVTGVF 145
Query: 147 LGIKHAARVMINRG-GGCIISTASVAGVMGGLGPHA--YTASKHAIVGLTKNAACELGRY 203
           L  + AAR M+++G GG II+TAS++G +  +      Y  SK A+V LTK  A EL  +
Sbjct: 146 LTAQAAARAMVDQGLGGTIITTASMSGHIINIPQQVSHYCTSKAAVVHLTKAMAVELAPH 205
Query: 204 GIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGT 263
            IRVN +SP  + T +                     +    +   + E    LG +   
Sbjct: 206 QIRVNSVSPGYIRTEL---------------------VEPLADYHALWEPKIPLGRMG-- 242
Query: 264 TLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
             R +++    LYLAS  S Y++G ++V+DGG T
Sbjct: 243 --RPEELTGLYLYLASAASSYMTGSDIVIDGGYT 274

>pdb|3RSH|A Chain A, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase (Fabg) From Vibrio Cholerae O1 Complexed With Nadp+ (Space Group P62) Length = 251

Iteration: 1
 Score =  108 bits (270), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 79/276 (28%), Positives = 133/276 (48%), Gaps = 29/276 (10%)
Query: 21  DAPPSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPV 80
           +A      LEGKVA++TG +RGIG+A   L A  GAKV+     ++    ++  L     
Sbjct: 2   NAMSQFMNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNG- 60
Query: 81  TFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRV 140
             +  +V+  E IE ++ +    +G +DIL NNAG+     +   ++    +E+ ++M  
Sbjct: 61  KGMALNVTNPESIEAVLKAITDEFGGVDILVNNAGIT----RDNLLMRMKEEEWSDIMET 116
Query: 141 NVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACEL 200
           N+  +    K   R M+ +  G II+  SV G MG  G   Y A+K  ++G TK+ A E+
Sbjct: 117 NLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREV 176
Query: 201 GRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNL 260
              G+ VN ++P  + T M           +E+       +P+ +           LG+ 
Sbjct: 177 ASRGVTVNTVAPGFIETDM------TKALNDEQRTATLAQVPAGR-----------LGD- 218
Query: 261 KGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGV 296
                  ++IA A  +LAS E+ Y++G  L V+GG+
Sbjct: 219 ------PREIASAVAFLASPEAAYITGETLHVNGGM 248

>pdb|1VL8|A Chain A, Crystal Structure Of Gluconate 5-dehydrogenase (tm0441) From Thermotoga Maritima At 2.07 A Resolution Length = 267

Iteration: 1
 Score =  108 bits (269), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 89/274 (32%), Positives = 131/274 (47%), Gaps = 32/274 (11%)
Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAP---APVTFVHC 85
           L G+VA++TGG+RG+G    +  A  G  VV+A       S  A  L            C
Sbjct: 19  LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRC 78
Query: 86  DVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGM 145
           DVS  E+++ L+ +   ++G+LD + N AG+    R+H +  +F  DEF  V+ VN+ G 
Sbjct: 79  DVSNYEEVKKLLEAVKEKFGKLDTVVNAAGI---NRRHPAE-EFPLDEFRQVIEVNLFGT 134
Query: 146 ALGIKHAARVMINRGGGCIISTASVAGVMGGLGPH--AYTASKHAIVGLTKNAACELGRY 203
               + A  ++       II+  S+  V     P+  AY ASK  +  LTK  A E GRY
Sbjct: 135 YYVCREAFSLLRESDNPSIINIGSLT-VEEVTMPNISAYAASKGGVASLTKALAKEWGRY 193
Query: 204 GIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGT 263
           GIRVN I+P    T M    +    D E+ D  +   IP                   G 
Sbjct: 194 GIRVNVIAPGWYRTKMTEAVF---SDPEKLDYMLK-RIPL------------------GR 231
Query: 264 TLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
           T   +D+   A++LAS+E++YV+G  + VDGG T
Sbjct: 232 TGVPEDLKGVAVFLASEEAKYVTGQIIFVDGGWT 265

>pdb|3TZC|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(Y155f) From Vibrio Cholerae Length = 251

Iteration: 1
 Score =  107 bits (266), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 78/276 (28%), Positives = 133/276 (48%), Gaps = 29/276 (10%)
Query: 21  DAPPSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPV 80
           +A      LEGKVA++TG +RGIG+A   L A  GAKV+     ++    ++  L     
Sbjct: 2   NAMSQFMNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNG- 60
Query: 81  TFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRV 140
             +  +V+  E IE ++ +    +G +DIL NNAG+     +   ++    +E+ ++M  
Sbjct: 61  KGMALNVTNPESIEAVLKAITDEFGGVDILVNNAGIT----RDNLLMRMKEEEWSDIMET 116
Query: 141 NVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACEL 200
           N+  +    K   R M+ +  G II+  SV G MG  G   + A+K  ++G TK+ A E+
Sbjct: 117 NLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANFAAAKAGVIGFTKSMAREV 176
Query: 201 GRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNL 260
              G+ VN ++P  + T M           +E+       +P+ +           LG+ 
Sbjct: 177 ASRGVTVNTVAPGFIETDM------TKALNDEQRTATLAQVPAGR-----------LGD- 218
Query: 261 KGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGV 296
                  ++IA A  +LAS E+ Y++G  L V+GG+
Sbjct: 219 ------PREIASAVAFLASPEAAYITGETLHVNGGM 248

>pdb|3TZK|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score =  106 bits (264), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 78/276 (28%), Positives = 132/276 (47%), Gaps = 29/276 (10%)
Query: 21  DAPPSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPV 80
           +A      LEGKVA++TG +RGIG+A   L A  GAKV+     ++    ++  L     
Sbjct: 2   NAMSQFMNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNG- 60
Query: 81  TFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRV 140
             +  +V+  E IE ++ +    +G +DIL NNA +     +   ++    +E+ ++M  
Sbjct: 61  KGMALNVTNPESIEAVLKAITDEFGGVDILVNNAAIT----RDNLLMRMKEEEWSDIMET 116
Query: 141 NVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACEL 200
           N+  +    K   R M+ +  G II+  SV G MG  G   Y A+K  ++G TK+ A E+
Sbjct: 117 NLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREV 176
Query: 201 GRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNL 260
              G+ VN ++P  + T M           +E+       +P+ +           LG+ 
Sbjct: 177 ASRGVTVNTVAPGFIETDM------TKALNDEQRTATLAQVPAGR-----------LGD- 218
Query: 261 KGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGV 296
                  ++IA A  +LAS E+ Y++G  L V+GG+
Sbjct: 219 ------PREIASAVAFLASPEAAYITGETLHVNGGM 248

>pdb|2C07|A Chain A, Oxoacyl-Acp Reductase Of Plasmodium Falciparum Length = 285

Iteration: 1
 Score =  106 bits (264), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 79/289 (27%), Positives = 148/289 (51%), Gaps = 30/289 (10%)
Query: 11  LQGIHVLAWDDAPPSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVV-IADVEDTLGS 69
           L+ +++L+ +     +   E KVA++TG  RGIG    ++ A+  + V+ I+  + +  S
Sbjct: 24  LEFMNLLSENKKENYYYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDS 83
Query: 70  VLASTLAPAPVTFVHC-DVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIID 128
           V+    +    +  +  DVS +E+I  +IN  ++ +  +DIL NNAG+     +    + 
Sbjct: 84  VVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNVDILVNNAGIT----RDNLFLR 139
Query: 129 FDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHA 188
              DE+++V+R N+  +    +  ++ MIN   G II+ +S+ G+ G +G   Y++SK  
Sbjct: 140 MKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAG 199
Query: 189 IVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVR 248
           ++G TK+ A EL    I VN I+P  +++ M           ++  E +   I S     
Sbjct: 200 VIGFTKSLAKELASRNITVNAIAPGFISSDMT----------DKISEQIKKNIISNIPAG 249
Query: 249 KMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
           +M           GT    +++A  A +L+SD+S Y++G   V+DGG++
Sbjct: 250 RM-----------GT---PEEVANLACFLSSDKSGYINGRVFVIDGGLS 284

>pdb|3QIV|A Chain A, Crystal Structure Of A Putative Short-Chain Dehydrogenase Or 3- Oxoacyl-[acyl-Carrier-Protein] Reductase From Mycobacterium Paratuberculosis Atcc Baa-968 K-10 Length = 253

Iteration: 1
 Score =  105 bits (263), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 83/274 (30%), Positives = 126/274 (45%), Gaps = 29/274 (10%)
Query: 24  PSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAP--APVT 81
           P   R E KV I+TG   GIG+A     AR GA VV+AD+       +A  +        
Sbjct: 2   PGSMRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAI 61
Query: 82  FVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVN 141
            V  DVS  E  + + + T++ +G +D L NNA + G   K   ++  D + +   M VN
Sbjct: 62  SVAVDVSDPESAKAMADRTLAEFGGIDYLVNNAAIFGGM-KLDFLLTIDPEYYKKFMSVN 120
Query: 142 VKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELG 201
           + G     +   + M  RGGG I++ +S A     L  + Y  +K  I GLT+  + ELG
Sbjct: 121 LDGALWCTRAVYKKMTKRGGGAIVNQSSTAAW---LYSNYYGLAKVGINGLTQQLSRELG 177
Query: 202 RYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLK 261
              IR+N I+P  + T     A R +   E  D+ +  G+P           +S +G   
Sbjct: 178 GRNIRINAIAPGPIDTE----ANRTTTPKEMVDDIVK-GLP-----------LSRMGT-- 219
Query: 262 GTTLRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
                  D+    L+L SDE+ +++G    VDGG
Sbjct: 220 -----PDDLVGMCLFLLSDEASWITGQIFNVDGG 248

>pdb|3U09|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92d) From Vibrio Cholerae Length = 251

Iteration: 1
 Score =  105 bits (262), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 78/276 (28%), Positives = 132/276 (47%), Gaps = 29/276 (10%)
Query: 21  DAPPSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPV 80
           +A      LEGKVA++TG +RGIG+A   L A  GAKV+     ++    ++  L     
Sbjct: 2   NAMSQFMNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNG- 60
Query: 81  TFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRV 140
             +  +V+  E IE ++ +    +G +DIL NNA +     +   ++    +E+ ++M  
Sbjct: 61  KGMALNVTNPESIEAVLKAITDEFGGVDILVNNADIT----RDNLLMRMKEEEWSDIMET 116
Query: 141 NVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACEL 200
           N+  +    K   R M+ +  G II+  SV G MG  G   Y A+K  ++G TK+ A E+
Sbjct: 117 NLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREV 176
Query: 201 GRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNL 260
              G+ VN ++P  + T M           +E+       +P+ +           LG+ 
Sbjct: 177 ASRGVTVNTVAPGFIETDM------TKALNDEQRTATLAQVPAGR-----------LGD- 218
Query: 261 KGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGV 296
                  ++IA A  +LAS E+ Y++G  L V+GG+
Sbjct: 219 ------PREIASAVAFLASPEAAYITGETLHVNGGM 248

>pdb|2EW8|A Chain A, Crystal Structure Of The (s)-specific 1-phenylethanol Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1 Length = 249

Iteration: 1
 Score =  105 bits (261), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 88/288 (30%), Positives = 123/288 (42%), Gaps = 62/288 (21%)
Query: 27  RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAP------- 79
           +RL+ K+A+ITGGA GIG A    FA  GA + IAD            L PAP       
Sbjct: 3   QRLKDKLAVITGGANGIGRAIAERFAVEGADIAIAD------------LVPAPEAEAAIR 50
Query: 80  -----VTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDA--- 131
                V  V CDVS   D+E      +S +GR DIL NNAG+         +I FD    
Sbjct: 51  NLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDILVNNAGIY-------PLIPFDELTF 103
Query: 132 DEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVG 191
           +++     +NV    L  K     M   G G II+  S    +       Y ++K A +G
Sbjct: 104 EQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIG 163
Query: 192 LTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKME 251
            T+  A +LG+ GI VN I+P  V T                         +  E   + 
Sbjct: 164 FTRALASDLGKDGITVNAIAPSLVRT-------------------------ATTEASALS 198
Query: 252 EFVSGLGNLKGTTLRSK---DIAEAALYLASDESRYVSGHNLVVDGGV 296
                L N+     R +   D+  AA +LASD++ +++G  L VDGG+
Sbjct: 199 AMFDVLPNMLQAIPRLQVPLDLTGAAAFLASDDASFITGQTLAVDGGM 246

>pdb|3AK4|A Chain A, Crystal Structure Of Nadh-Dependent Quinuclidinone Reductase From Agrobacterium Tumefaciens Length = 263

Iteration: 1
 Score =  105 bits (261), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 86/277 (31%), Positives = 136/277 (49%), Gaps = 35/277 (12%)
Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVS 88
           L G+ AI+TGG++GIG A  R   + GA V IAD++      + + L       V  DV+
Sbjct: 10  LSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFA-VEVDVT 68
Query: 89  LEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALG 148
               ++  +   +   G  D+L  NAGV       +  +D   +E+D    VN +G+ L 
Sbjct: 69  KRASVDAAMQKAIDALGGFDLLCANAGV----STMRPAVDITDEEWDFNFDVNARGVFLA 124
Query: 149 IKHAAR-VMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRV 207
            + A R  + +   G I++TAS+A  +G      Y+ASK A+ G T+  A E+    IRV
Sbjct: 125 NQIACRHFLASNTKGVIVNTASLAAKVGAPLLAHYSASKFAVFGWTQALAREMAPKNIRV 184
Query: 208 NCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKME------EFVS--GLGN 259
           NC+ P  V T+M            +E E     I  + E+R M       E+VS   LG 
Sbjct: 185 NCVCPGFVKTAM------------QERE-----IIWEAELRGMTPEAVRAEYVSLTPLGR 227
Query: 260 LKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGV 296
           ++      +D+A+  ++LASD +R+++G  + V GGV
Sbjct: 228 IE----EPEDVADVVVFLASDAARFMTGQGINVTGGV 260

>pdb|3FTP|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Burkholderia Pseudomallei At 2.05 A Resolution Length = 270

Iteration: 1
 Score =  104 bits (260), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 131/275 (47%), Gaps = 30/275 (10%)
Query: 27  RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTF--VH 84
           + L+ +VAI+TG +RGIG A     AR GA V+     +     + +    A +      
Sbjct: 24  KTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAV 83
Query: 85  CDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKG 144
            +V+    ++ L+ ST+  +G L++L NNAG+  +Q   +       DE+D V+  N+K 
Sbjct: 84  LNVNDATAVDALVESTLKEFGALNVLVNNAGITQDQLAMR----MKDDEWDAVIDTNLKA 139
Query: 145 MALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYG 204
           +    +   R M+   GG I++  SV G  G  G   Y A+K  + G+T+  A E+G  G
Sbjct: 140 VFRLSRAVLRPMMKARGGRIVNITSVVGSAGNPGQVNYAAAKAGVAGMTRALAREIGSRG 199
Query: 205 IRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT 264
           I VNC++P  + T M        G  +E+   +   IP              LG L    
Sbjct: 200 ITVNCVAPGFIDTDM------TKGLPQEQQTALKTQIP--------------LGRLG--- 236
Query: 265 LRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTS 299
              +DIA A  +LAS ++ Y++G  L V+GG+  S
Sbjct: 237 -SPEDIAHAVAFLASPQAGYITGTTLHVNGGMFMS 270

>pdb|3UVE|A Chain A, Crystal Structure Of Carveol Dehydrogenase ((+)-Trans-Carveol Dehydrogenase) From Mycobacterium Avium Length = 286

Iteration: 1
 Score =  104 bits (260), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 87/289 (30%), Positives = 136/289 (47%), Gaps = 35/289 (12%)
Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAP-------- 79
           R+EGKVA +TG ARG G +     A+ GA ++  D+   + + +  T  PA         
Sbjct: 8   RVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAET 67
Query: 80  ----------VTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDF 129
                     +     DV   + ++  ++S V + GRLDI+  NAG+ GN     ++   
Sbjct: 68  ADLVKGHNRRIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGI-GNGGD--TLDKT 124
Query: 130 DADEFDNVMRVNVKGMALGIKHAARVMINRG-GGCIISTASVAGVMGGLGPHA--YTASK 186
             +++  ++ +N+ G+   +K     MI  G GG II T+SV G+     PH   Y A+K
Sbjct: 125 SEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLKAY--PHTGHYVAAK 182
Query: 187 HAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKE 246
           H +VGL +    ELG++ IRVN + P  V T ML N      +G  +    +   P   +
Sbjct: 183 HGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHN------EGTFKMFRPDLENPGPDD 236
Query: 247 VRKMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
              M         L    +   DI+ A L+ ASDE+RY++G  L +D G
Sbjct: 237 ---MAPICQMFHTLPIPWVEPIDISNAVLFFASDEARYITGVTLPIDAG 282

>pdb|1WMB|A Chain A, Crystal Structure Of Nad Dependent D-3-Hydroxybutylate Dehydrogenase Length = 260

Iteration: 1
 Score =  104 bits (260), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 89/287 (31%), Positives = 133/287 (46%), Gaps = 48/287 (16%)
Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDT--LGSVLASTLAPAPVTFVH-- 84
           L+GKVA++TG   GIG       A  GA +V+    D   +  V A   A   V  ++  
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDG 61
Query: 85  CDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSII-DFDADEFDNVMRVNVK 143
            D+S  E +  L+++ V + GR+DIL NNAG+     +H ++I DF  +++D ++ +N+ 
Sbjct: 62  ADLSKGEAVRGLVDNAVRQMGRIDILVNNAGI-----QHTALIEDFPTEKWDAILALNLS 116
Query: 144 GMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRY 203
            +  G   A   M  +G G II+ AS  G++      AY A+KH +VG TK  A E    
Sbjct: 117 AVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQ 176
Query: 204 GIRVNCISPFGVATSMLVN-----AWRNSGDGE--------EEDECMNFGIPSQKEVRKM 250
           GI  N I P  V T ++       A +N  D E        E+   + F  P Q      
Sbjct: 177 GITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQ------ 230
Query: 251 EEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
                    L GT          A++LASD +  ++G  + VDGG T
Sbjct: 231 ---------LGGT----------AVFLASDAAAQITGTTVSVDGGWT 258

>pdb|1RWB|A Chain A, Cooperative Effect Of Two Surface Amino Acid Mutations (Q252l And E170k) Of Glucose Dehydrogenase From Bacillus Megaterium Iwg3 For The Stabilization Of Oligomeric State Length = 261

Iteration: 1
 Score =  104 bits (260), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 89/278 (32%), Positives = 133/278 (47%), Gaps = 34/278 (12%)
Query: 26  HRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVI--ADVEDTLGSVLAS-TLAPAPVTF 82
           ++ LEGKV +ITG + G+G++    FA   AKVV+     ED   SVL            
Sbjct: 2   YKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIA 61
Query: 83  VHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNV 142
           V  DV++E D+ NL+ S +  +G+LD++ NNAG+      H    +    +++ V+  N+
Sbjct: 62  VKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSH----EMSLSDWNKVIDTNL 117
Query: 143 KGMALGIKHAARVMI-NRGGGCIISTASV-AGVMGGLGPHAYTASKHAIVGLTKNAACEL 200
            G  LG + A +  + N   G +I+ +SV   +   L  H Y ASK  +  +TK  A E 
Sbjct: 118 TGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVH-YAASKGGMKLMTKTLALEY 176
Query: 201 GRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQK-EVRKMEEFVSGLGN 259
              GIRVN I P  + T   +NA +             F  P Q+ +V  M         
Sbjct: 177 APKGIRVNNIGPGAINTP--INAEK-------------FADPEQRADVESMIPM------ 215
Query: 260 LKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
             G     ++IA  A +LAS E+ YV+G  L  DGG+T
Sbjct: 216 --GYIGEPEEIAAVAAWLASSEASYVTGITLFADGGMT 251

>pdb|3TSC|A Chain A, Crystal Structure Of Short Chain Dehydrogenase Map_2410 From Mycobacterium Paratuberculosis Bound To Nad Length = 277

Iteration: 1
 Score =  104 bits (260), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 98/290 (33%), Positives = 134/290 (46%), Gaps = 42/290 (14%)
Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDV 87
           +LEG+VA ITG ARG G A     A  GA ++  D+   L S +     PA    +   V
Sbjct: 8   KLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCV--PYDPASPDDLSETV 65
Query: 88  SLEE--------------DIENL---INSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFD 130
            L E              D + L   ++  V+  GRLDI+  NAGV   Q    +  D  
Sbjct: 66  RLVEAANRRIVAAVVDTRDFDRLRKVVDDGVAALGRLDIIVANAGVAAPQ----AWDDIT 121
Query: 131 ADEFDNVMRVNVKGMALGIKHAARVMINRG-GGCIISTASVAGV-MGGLGPHAYTASKHA 188
            ++F +VM +NV G    +   A  +I  G GG II  +S AG+ M     H YTASKHA
Sbjct: 122 PEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKMQPFMIH-YTASKHA 180
Query: 189 IVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVR 248
           + GL +  A ELG++ IRVN + P  V T M       SGD       M   +    E  
Sbjct: 181 VTGLARAFAAELGKHSIRVNSVHPGPVNTPM------GSGD-------MVTAVGQAMETN 227
Query: 249 -KMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
            ++   ++    L       +DIA+   +LASDESR V+   + VD G T
Sbjct: 228 PQLSHVLTPF--LPDWVAEPEDIADTVCWLASDESRKVTAAQIPVDQGST 275

>pdb|1YDE|A Chain A, Crystal Structure Of Human Retinal Short-Chain DehydrogenaseREDUCTASE 3 Length = 270

Iteration: 1
 Score =  104 bits (259), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 76/255 (29%), Positives = 124/255 (48%), Gaps = 25/255 (9%)
Query: 48  VRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRL 107
           VR F   GA+VVI D +++ G  L   L  A   F+ CDV+ E+D++ L++ T+ R+GRL
Sbjct: 26  VRAFVNSGARVVICDKDESGGRALEQELPGA--VFILCDVTQEDDVKTLVSETIRRFGRL 83
Query: 108 DILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIIST 167
           D + NNA   G+    +   +  A  F  ++ +N+ G    +   A   + +  G +I+ 
Sbjct: 84  DCVVNNA---GHHPPPQRPEETSAQGFRQLLELNLLG-TYTLTKLALPYLRKSQGNVINI 139
Query: 168 ASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNS 227
           +S+ G +G      Y A+K A+  +TK  A +   YG+RVNCISP  + T +    W   
Sbjct: 140 SSLVGAIGQAQAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPL----W--- 192
Query: 228 GDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSG 287
              EE    M    P  +   +       LG +     +  ++  AA++LAS E+ + +G
Sbjct: 193 ---EELAALM----PDPRASIREGMLAQPLGRMG----QPAEVGAAAVFLAS-EANFCTG 240
Query: 288 HNLVVDGGVTTSRNC 302
             L+V GG      C
Sbjct: 241 IELLVTGGAELGYGC 255

>pdb|3V2H|A Chain A, The Crystal Structure Of D-Beta-Hydroxybutyrate Dehydrogenase From Sinorhizobium Meliloti Length = 281

Iteration: 1
 Score =  103 bits (258), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 87/275 (31%), Positives = 129/275 (46%), Gaps = 30/275 (10%)
Query: 32  KVAIITGGARGIGEAAVRLFARHGAKVVI--ADVEDTLGSVLASTLAPAPVTFVH--CDV 87
           K A+ITG   GIG A  R  A+ GA +V+      D + +V       +  T +H   D 
Sbjct: 26  KTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADX 85
Query: 88  SLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMAL 147
           +   +I +       R+G  DIL NNAGV   ++    I DF  +++D ++ VN+     
Sbjct: 86  TKPSEIADXXAXVADRFGGADILVNNAGVQFVEK----IEDFPVEQWDRIIAVNLSSSFH 141
Query: 148 GIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRV 207
            I+ A      +G G II+ AS  G++      AY A+KH I GLTK  A E+   G+ V
Sbjct: 142 TIRGAIPPXKKKGWGRIINIASAHGLVASPFKSAYVAAKHGIXGLTKTVALEVAESGVTV 201
Query: 208 NCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKM-EEFVSGLGNLKGTTLR 266
           N I P  V T ++          E++       IP Q   R + EE V     LKG   +
Sbjct: 202 NSICPGYVLTPLV----------EKQ-------IPDQARTRGITEEQVINEVXLKGQPTK 244
Query: 267 S----KDIAEAALYLASDESRYVSGHNLVVDGGVT 297
                + +A  ALYLA D++  ++G ++  DGG T
Sbjct: 245 KFITVEQVASLALYLAGDDAAQITGTHVSXDGGWT 279

>pdb|3PGX|A Chain A, Crystal Structure Of A Putative Carveol Dehydrogenase From Mycobacterium Paratuberculosis Bound To Nicotinamide Adenine Dinucleotide Length = 280

Iteration: 1
 Score =  103 bits (257), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 91/290 (31%), Positives = 133/290 (45%), Gaps = 49/290 (16%)
Query: 29  LEGKVAIITGGARGIGEA-AVRLFARHGAKVVIADVEDTLGSVLAS-TLAPAPVTFVHCD 86
           L+G+VA ITG ARG G + AVRL A  GA ++  D+      V AS T APA    +   
Sbjct: 13  LQGRVAFITGAARGQGRSHAVRL-AAEGADIIACDI---CAPVSASVTYAPASPEDLDET 68
Query: 87  VSLEED-----------------IENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDF 129
             L ED                 +  L+   + ++GRLD++  NAGVL   R    + + 
Sbjct: 69  ARLVEDQGRKALTRVLDVRDDAALRELVADGMEQFGRLDVVVANAGVLSWGR----VWEL 124
Query: 130 DADEFDNVMRVNVKGMALGIKHAARVMINRG-GGCIISTASVAGVMGGLGPHAYTASKHA 188
             +++D V+ VN+ G    ++     MI  G GG I+  +S AG+    G   Y+ASKH 
Sbjct: 125 TDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKATPGNGHYSASKHG 184
Query: 189 IVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVR 248
           +  LT   A ELG YGIRVN I P+ V T M+            E E M       +   
Sbjct: 185 LTALTNTLAIELGEYGIRVNSIHPYSVETPMI------------EPEAM------MEIFA 226
Query: 249 KMEEFVSGLGNLKGTT---LRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
           +   FV     +       + + ++A+   +LA D S  ++G  + VD G
Sbjct: 227 RHPSFVHSFPPMPVQPNGFMTADEVADVVAWLAGDGSGTLTGTQIPVDKG 276

>pdb|1G6K|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant E96a Complexed With Nad+ Length = 261

Iteration: 1
 Score =  103 bits (257), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 88/278 (31%), Positives = 133/278 (47%), Gaps = 34/278 (12%)
Query: 26  HRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVI--ADVEDTLGSVLAS-TLAPAPVTF 82
           ++ LEGKV +ITG + G+G++    FA   AKVV+     ED   SVL            
Sbjct: 2   YKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIA 61
Query: 83  VHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNV 142
           V  DV++E D+ NL+ S +  +G+LD++ NNAG+      H    +    +++ V+  N+
Sbjct: 62  VKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLANPVSSH----EMSLSDWNKVIDTNL 117
Query: 143 KGMALGIKHAARVMI-NRGGGCIISTASV-AGVMGGLGPHAYTASKHAIVGLTKNAACEL 200
            G  LG + A +  + N   G +I+ +SV   +   L  H Y ASK  +  +T+  A E 
Sbjct: 118 TGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVH-YAASKGGMKLMTETLALEY 176
Query: 201 GRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQK-EVRKMEEFVSGLGN 259
              GIRVN I P  + T   +NA +             F  P Q+ +V  M         
Sbjct: 177 APKGIRVNNIGPGAINTP--INAEK-------------FADPEQRADVESMIPM------ 215
Query: 260 LKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
             G     ++IA  A +LAS E+ YV+G  L  DGG+T
Sbjct: 216 --GYIGEPEEIAAVAAWLASSEASYVTGITLFADGGMT 251

>pdb|2ZTM|A Chain A, T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase Length = 260

Iteration: 1
 Score =  103 bits (257), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 91/288 (31%), Positives = 133/288 (46%), Gaps = 50/288 (17%)
Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDT--LGSVLASTLAPAPVTFVH-- 84
           L+GKVA++TG   GIG       A  GA +V+    D   +  V A   A   V  ++  
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDG 61
Query: 85  CDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSII-DFDADEFDNVMRVNVK 143
            D+S  E +  L+++ V + GR+DIL NNAG+     +H ++I DF  +++D ++ +N+ 
Sbjct: 62  ADLSKGEAVRGLVDNAVRQMGRIDILVNNAGI-----QHTALIEDFPTEKWDAILALNLS 116
Query: 144 GMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRY 203
            +  G   A   M  +G G II+ AS  G++      AY A+KH +VG TK  A E    
Sbjct: 117 AVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQ 176
Query: 204 GIRVNCISPFGVATSMLVN------AWRNSGDGE--------EEDECMNFGIPSQKEVRK 249
           GI  N I P G   S LV       A +N  D E        E+   + F  P Q     
Sbjct: 177 GITANAICP-GWVRSPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQ----- 230
Query: 250 MEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
                     L GT          A++LASD +  ++G  + VDGG T
Sbjct: 231 ----------LGGT----------AVFLASDAAAQITGTTVSVDGGWT 258

>pdb|3F9I|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase Rickettsia Prowazekii Length = 249

Iteration: 1
 Score =  103 bits (256), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 80/268 (29%), Positives = 131/268 (48%), Gaps = 33/268 (12%)
Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVS 88
           L GK ++ITG + GIG A  RL  + G+KV+I+   +     L + L     T   C+++
Sbjct: 12  LTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKD-NYTIEVCNLA 70
Query: 89  LEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALG 148
            +E+  NLI    S+   LDIL  NAG+  +       I     +FD V+ +N+K   + 
Sbjct: 71  NKEECSNLI----SKTSNLDILVCNAGITSDTLA----IRMKDQDFDKVIDINLKANFIL 122
Query: 149 IKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVN 208
            + A + MI +  G II+ +S+ G+ G  G   Y ASK  ++G+TK+ + E+   GI VN
Sbjct: 123 NREAIKKMIQKRYGRIINISSIVGIAGNPGQANYCASKAGLIGMTKSLSYEVATRGITVN 182
Query: 209 CISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSK 268
            ++P  + + M           E++ E +   IP                   GT    +
Sbjct: 183 AVAPGFIKSDM------TDKLNEKQREAIVQKIP------------------LGTYGIPE 218
Query: 269 DIAEAALYLASDESRYVSGHNLVVDGGV 296
           D+A A  +LAS+ + Y++G  L V+GG+
Sbjct: 219 DVAYAVAFLASNNASYITGQTLHVNGGM 246

>pdb|3CXR|A Chain A, Crystal Structure Of Gluconate 5-Dehydrogase From Streptococcus Suis Type 2 Length = 291

Iteration: 1
 Score =  103 bits (256), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 83/271 (30%), Positives = 127/271 (46%), Gaps = 24/271 (8%)
Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVH---C 85
           L+GK+A++TG + GIG A    +A+ GA +V  D+   L     +    A +   H   C
Sbjct: 32  LKGKIALVTGASYGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAAGIN-AHGYVC 90
Query: 86  DVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGM 145
           DV+ E+ I+ ++    S  G +DIL NNAG++    +   +I+  A +F  V+ +++   
Sbjct: 91  DVTDEDGIQAMVAQIESEVGIIDILVNNAGII----RRVPMIEMTAAQFRQVIDIDLNAP 146
Query: 146 ALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGI 205
            +  K     MI +G G II+  S+   +G     AY A+K  +  LTKN A E G   I
Sbjct: 147 FIVSKAVIPSMIKKGHGKIINICSMMSELGRETVSAYAAAKGGLKMLTKNIASEYGEANI 206
Query: 206 RVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL 265
           + N I P  +AT           DG        F I      R  E              
Sbjct: 207 QCNGIGPGYIATPQTAPLRELQKDGSRH-PFDQFIIAKTPAARWGE-------------- 251
Query: 266 RSKDIAEAALYLASDESRYVSGHNLVVDGGV 296
            ++D+   A++LASD S +V+GH L VDGG+
Sbjct: 252 -AEDLMGPAVFLASDASNFVNGHILYVDGGI 281

>pdb|1GCO|A Chain A, Crystal Structure Of Glucose Dehydrogenase Complexed With Nad+ Length = 261

Iteration: 1
 Score =  103 bits (256), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 88/278 (31%), Positives = 133/278 (47%), Gaps = 34/278 (12%)
Query: 26  HRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVI--ADVEDTLGSVLAS-TLAPAPVTF 82
           ++ LEGKV +ITG + G+G++    FA   AKVV+     ED   SVL            
Sbjct: 2   YKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIA 61
Query: 83  VHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNV 142
           V  DV++E D+ NL+ S +  +G+LD++ NNAG+      H    +    +++ V+  N+
Sbjct: 62  VKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSH----EMSLSDWNKVIDTNL 117
Query: 143 KGMALGIKHAARVMI-NRGGGCIISTASV-AGVMGGLGPHAYTASKHAIVGLTKNAACEL 200
            G  LG + A +  + N   G +I+ +SV   +   L  H Y ASK  +  +T+  A E 
Sbjct: 118 TGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVH-YAASKGGMKLMTETLALEY 176
Query: 201 GRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQK-EVRKMEEFVSGLGN 259
              GIRVN I P  + T   +NA +             F  P Q+ +V  M         
Sbjct: 177 APKGIRVNNIGPGAINTP--INAEK-------------FADPEQRADVESMIPM------ 215
Query: 260 LKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
             G     ++IA  A +LAS E+ YV+G  L  DGG+T
Sbjct: 216 --GYIGEPEEIAAVAAWLASSEASYVTGITLFADGGMT 251

>pdb|1GEE|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant Q252l Complexed With Nad+ Length = 261

Iteration: 1
 Score =  102 bits (255), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 88/278 (31%), Positives = 133/278 (47%), Gaps = 34/278 (12%)
Query: 26  HRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVI--ADVEDTLGSVLAS-TLAPAPVTF 82
           ++ LEGKV +ITG + G+G++    FA   AKVV+     ED   SVL            
Sbjct: 2   YKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIA 61
Query: 83  VHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNV 142
           V  DV++E D+ NL+ S +  +G+LD++ NNAG+      H    +    +++ V+  N+
Sbjct: 62  VKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSH----EMSLSDWNKVIDTNL 117
Query: 143 KGMALGIKHAARVMI-NRGGGCIISTASV-AGVMGGLGPHAYTASKHAIVGLTKNAACEL 200
            G  LG + A +  + N   G +I+ +SV   +   L  H Y ASK  +  +T+  A E 
Sbjct: 118 TGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVH-YAASKGGMKLMTETLALEY 176
Query: 201 GRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQK-EVRKMEEFVSGLGN 259
              GIRVN I P  + T   +NA +             F  P Q+ +V  M         
Sbjct: 177 APKGIRVNNIGPGAINTP--INAEK-------------FADPEQRADVESMIPM------ 215
Query: 260 LKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
             G     ++IA  A +LAS E+ YV+G  L  DGG+T
Sbjct: 216 --GYIGEPEEIAAVAAWLASSEASYVTGITLFADGGMT 251

>pdb|2ZTU|A Chain A, T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase Complexed With Nad+ Length = 260

Iteration: 1
 Score =  102 bits (254), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 87/289 (30%), Positives = 132/289 (45%), Gaps = 52/289 (17%)
Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVI------ADVEDTLGSVLASTLAPAPVTF 82
           L+GKVA++TG   GIG       A  GA +V+      A++E     + A       V +
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQH--GVKVLY 59
Query: 83  VHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSII-DFDADEFDNVMRVN 141
              D+S  E +  L+++ V + GR+DIL NNAG+     +H ++I DF  +++D ++ +N
Sbjct: 60  DGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGI-----QHTALIEDFPTEKWDAILALN 114
Query: 142 VKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELG 201
           +  +  G   A   M  +G G II+ AS  G++      AY A+KH +VG TK  A E  
Sbjct: 115 LSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETA 174
Query: 202 RYGIRVNCISPFGVATSMLVN-----AWRNSGDGE--------EEDECMNFGIPSQKEVR 248
             GI  N I P  V   ++       A +N  D E        E+   + F  P Q    
Sbjct: 175 GQGITANAICPGWVRAPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQ---- 230
Query: 249 KMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
                      L GT          A++LASD +  ++G  + VDGG T
Sbjct: 231 -----------LGGT----------AVFLASDAAAQITGTTVSVDGGWT 258

>pdb|2GDZ|A Chain A, Crystal Structure Of 15-Hydroxyprostaglandin Dehydrogenase Type1, Complexed With Nad+ Length = 267

Iteration: 1
 Score =  102 bits (254), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 76/232 (32%), Positives = 118/232 (50%), Gaps = 25/232 (10%)
Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLG----SVLASTLAPAPVTFVH 84
           + GKVA++TG A+GIG A        GAKV + D     G    + L     P    F+ 
Sbjct: 5   VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQ 64
Query: 85  CDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKG 144
           CDV+ ++ + +     V  +GRLDIL NNAGV  N++  +  +        N++ V + G
Sbjct: 65  CDVADQQQLRDTFRKVVDHFGRLDILVNNAGV-NNEKNWEKTLQI------NLVSV-ISG 116
Query: 145 MALGIKHAARVMINRG-GGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNA--ACELG 201
             LG+ + ++   N G GG II+ +S+AG+M       Y ASKH IVG T++A  A  L 
Sbjct: 117 TYLGLDYMSKQ--NGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAANLM 174
Query: 202 RYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEF 253
             G+R+N I P  V T++L        +  E++E M   I  +  ++ M ++
Sbjct: 175 NSGVRLNAICPGFVNTAIL--------ESIEKEENMGQYIEYKDHIKDMIKY 218

>pdb|3N74|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reduc Brucella Melitensis Length = 261

Iteration: 1
 Score =  102 bits (253), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 91/277 (32%), Positives = 142/277 (51%), Gaps = 30/277 (10%)
Query: 24  PSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFV 83
           P    LEGKVA+ITG   G GE   + FA+ GAKVVI D +      +A  +  A +  V
Sbjct: 2   PGSMSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALA-V 60
Query: 84  HCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVK 143
             D+S E D++  + + +S++G++DIL NNAG+ G++ ++  ++  + +EFD ++ VNV+
Sbjct: 61  AADISKEADVDAAVEAALSKFGKVDILVNNAGI-GHKPQNAELV--EPEEFDRIVGVNVR 117
Query: 144 GMALGI-KHAARVMIN--RGGGCIISTASVAGVMGGLGPHA--YTASKHAIVGLTKNAAC 198
           G+ L   K       N  +G  C+I   +  G  G   P+   Y A+K  +V +TK  A 
Sbjct: 118 GVYLMTSKLIPHFKENGAKGQECVILNVASTGA-GRPRPNLAWYNATKGWVVSVTKALAI 176
Query: 199 ELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLG 258
           EL    IRV  ++P    T +L         GE+ +           E+RK       +G
Sbjct: 177 ELAPAKIRVVALNPVAGETPLLTTFM-----GEDSE-----------EIRKKFRDSIPMG 220
Query: 259 NLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
            L    L+  D+AEAA +L S ++  ++G  L VDGG
Sbjct: 221 RL----LKPDDLAEAAAFLCSPQASMITGVALDVDGG 253

>pdb|1I01|A Chain A, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein] Reductase From E. Coli. Length = 244

Iteration: 1
 Score =  101 bits (252), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 79/268 (29%), Positives = 131/268 (48%), Gaps = 29/268 (10%)
Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVS 88
            EGK+A++TG +RGIG A     A  GAKV+     +     ++  L  A    +  +V+
Sbjct: 3   FEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLG-ANGKGLMLNVT 61
Query: 89  LEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALG 148
               IE+++    + +G +DIL NNAG+     +   ++    +E+++++  N+  +   
Sbjct: 62  DPASIESVLEKIRAEFGEVDILVNNAGIT----RDNLLMRMKDEEWNDIIETNLSSVFRL 117
Query: 149 IKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVN 208
            K   R M+ +  G II+  SV G MG  G   Y A+K  ++G +K+ A E+   GI VN
Sbjct: 118 SKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVASRGITVN 177
Query: 209 CISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSK 268
            ++P  + T M     R   D +        GI +Q             G L G    ++
Sbjct: 178 VVAPGFIETDMT----RALSDDQRA------GILAQVPA----------GRLGG----AQ 213
Query: 269 DIAEAALYLASDESRYVSGHNLVVDGGV 296
           +IA A  +LASDE+ Y++G  L V+GG+
Sbjct: 214 EIANAVAFLASDEAAYITGETLHVNGGM 241

>pdb|3OSU|A Chain A, Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Protein Reductase, Fabg, From Staphylococcus Aureus Length = 246

Iteration: 1
 Score =  101 bits (252), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 79/267 (29%), Positives = 132/267 (49%), Gaps = 31/267 (11%)
Query: 32  KVAIITGGARGIGEAAVRLFARHGAKVVI--ADVEDTLGSVLASTLAPAPVTF-VHCDVS 88
           K A++TG +RGIG +     A  G  V +  A  ++   +V+    A    +F +  +V+
Sbjct: 5   KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVA 64
Query: 89  LEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALG 148
             ++++  I   VS++G LD+L NNAG+     +   +      E+D+V+  N+KG+   
Sbjct: 65  DADEVKAXIKEVVSQFGSLDVLVNNAGIT----RDNLLXRXKEQEWDDVIDTNLKGVFNC 120
Query: 149 IKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVN 208
           I+ A    + +  G II+ +SV G +G  G   Y A+K  ++GLTK+AA EL   GI VN
Sbjct: 121 IQKATPQXLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVN 180
Query: 209 CISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSK 268
            ++P G   S   +A       +E  E     IP           ++  G       +  
Sbjct: 181 AVAP-GFIVSDXTDAL-----SDELKEQXLTQIP-----------LARFG-------QDT 216
Query: 269 DIAEAALYLASDESRYVSGHNLVVDGG 295
           DIA    +LASD+++Y++G  + V+GG
Sbjct: 217 DIANTVAFLASDKAKYITGQTIHVNGG 243

>pdb|2ET6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candida Tropicalis Peroxisomal Multifunctional Enzyme Type 2 Length = 604

Iteration: 1
 Score =  101 bits (251), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 61/184 (33%), Positives = 100/184 (54%), Gaps = 6/184 (3%)
Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVS 88
           L+ KV +ITG   G+G+   + FA++GAKVV+ D +D   +V     A         DV+
Sbjct: 320 LKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKTVDEIKAAGGEAWPDQHDVA 379
Query: 89  LEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALG 148
             +D E +I + + +YG +DIL NNAG+L    + +S       E+D+V +V++ G    
Sbjct: 380 --KDSEAIIKNVIDKYGTIDILVNNAGIL----RDRSFAKMSKQEWDSVQQVHLIGTFNL 433
Query: 149 IKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVN 208
            + A    + +  G II+  S +G+ G  G   Y++SK  I+GL+K  A E  +  I+VN
Sbjct: 434 SRLAWPYFVEKQFGRIINITSTSGIYGNFGQANYSSSKAGILGLSKTMAIEGAKNNIKVN 493
Query: 209 CISP 212
            ++P
Sbjct: 494 IVAP 497

>pdb|3RIH|A Chain A, Crystal Structure Of A Putative Short Chain Dehydrogenase Or Reductase From Mycobacterium Abscessus Length = 293

Iteration: 1
 Score =  101 bits (251), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 94/297 (31%), Positives = 131/297 (44%), Gaps = 37/297 (12%)
Query: 8   ETNLQGI-HVLAWDDAPPSHRR----LEGKVAIITGGARGIGEAAVRLFARHGAKVVIAD 62
           E   QG   +L  + A P+ R+    L  +  ++TGG +GIG     +FAR GA V +A 
Sbjct: 13  EAQTQGPGSMLVVESAEPAERKVMFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAA 72
Query: 63  VED-TLGSVLAS--TLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGN 119
                L SV A    L    V  V  DVS      +   + V  +G LD++  NAG+   
Sbjct: 73  RSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFGALDVVCANAGIFPE 132
Query: 120 QRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAG-VMGGLG 178
            R          ++   V+ VNVKG    ++     +   G G +I T+S+ G V G  G
Sbjct: 133 ARLDT----MTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTGYPG 188
Query: 179 PHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMN 238
              Y ASK A +G  + AA EL   G+ VN I P  + T  LV+       GEE    M 
Sbjct: 189 WSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDM------GEEYISGMA 242
Query: 239 FGIPSQKEVRKMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
             IP              +G L        DI   A +LA+DE+ Y++G  +VVDGG
Sbjct: 243 RSIP--------------MGMLGSPV----DIGHLAAFLATDEAGYITGQAIVVDGG 281

>pdb|1GEG|A Chain A, Cryatal Structure Analysis Of Meso-2,3-Butanediol Dehydrogenase Length = 256

Iteration: 1
 Score =  100 bits (249), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 85/268 (31%), Positives = 122/268 (45%), Gaps = 20/268 (7%)
Query: 32  KVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL--APAPVTFVHCDVSL 89
           KVA++TG  +GIG+A      + G  V IAD  D     +AS +  A      V  DVS 
Sbjct: 3   KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSD 62
Query: 90  EEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGI 149
            + +   +       G  D++ NNAGV         I     +  D V  +NVKG+  GI
Sbjct: 63  RDQVFAAVEQARKTLGGFDVIVNNAGV----APSTPIESITPEIVDKVYNINVKGVIWGI 118
Query: 150 KHAARVMINRG-GGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVN 208
           + A       G GG II+  S AG +G      Y++SK A+ GLT+ AA +L   GI VN
Sbjct: 119 QAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVN 178
Query: 209 CISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSK 268
              P  V T M    W        E      G  + +  +++      LG L       +
Sbjct: 179 GYCPGIVKTPM----WAEIDRQVSEAAGKPLGYGTAEFAKRIT-----LGRLS----EPE 225
Query: 269 DIAEAALYLASDESRYVSGHNLVVDGGV 296
           D+A    YLAS +S Y++G +L++DGG+
Sbjct: 226 DVAACVSYLASPDSDYMTGQSLLIDGGM 253

>pdb|1Q7C|A Chain A, The Structure Of Betaketoacyl-[acp] Reductase Y151f Mutant In Complex With Nadph Fragment Length = 244

Iteration: 1
 Score =  100 bits (249), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 78/268 (29%), Positives = 131/268 (48%), Gaps = 29/268 (10%)
Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVS 88
            EGK+A++TG +RGIG A     A  GAKV+     +     ++  L  A    +  +V+
Sbjct: 3   FEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLG-ANGKGLMLNVT 61
Query: 89  LEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALG 148
               IE+++    + +G +DIL NNAG+     +   ++    +E+++++  N+  +   
Sbjct: 62  DPASIESVLEKIRAEFGEVDILVNNAGIT----RDNLLMRMKDEEWNDIIETNLSSVFRL 117
Query: 149 IKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVN 208
            K   R M+ +  G II+  SV G MG  G   + A+K  ++G +K+ A E+   GI VN
Sbjct: 118 SKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANFAAAKAGLIGFSKSLAREVASRGITVN 177
Query: 209 CISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSK 268
            ++P  + T M     R   D +        GI +Q             G L G    ++
Sbjct: 178 VVAPGFIETDMT----RALSDDQRA------GILAQVPA----------GRLGG----AQ 213
Query: 269 DIAEAALYLASDESRYVSGHNLVVDGGV 296
           +IA A  +LASDE+ Y++G  L V+GG+
Sbjct: 214 EIANAVAFLASDEAAYITGETLHVNGGM 241

>pdb|3AUS|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 In Ligand-Free Form Length = 269

Iteration: 1
 Score =  100 bits (248), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 84/277 (30%), Positives = 131/277 (47%), Gaps = 32/277 (11%)
Query: 26  HRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIA---DVEDTLGSVLASTLAPAPVTF 82
           +  L+ KV +ITGG+ G+G A    F +  AKVVI    + E+ L +      A      
Sbjct: 10  YTDLKDKVVVITGGSTGLGRAMAVRFGQEEAKVVINYYNNEEEALDAKKEVEEAGGQAII 69
Query: 83  VHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNV 142
           V  DV+ EED+ NL+ + +  +G LD++ NNAGV      H    +   D ++ V+  N+
Sbjct: 70  VQGDVTKEEDVVNLVQTAIKEFGTLDVMINNAGVENPVPSH----ELSLDNWNKVIDTNL 125
Query: 143 KGMALGIKHAARVMI-NRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELG 201
            G  LG + A +  + N   G +I+ +SV  ++       Y ASK  +  +T+  A E  
Sbjct: 126 TGAFLGSREAIKYFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEYA 185
Query: 202 RYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQK-EVRKMEEFVSGLGNL 260
             GIRVN I P  + T   +NA +             F  P Q+ +V  M          
Sbjct: 186 PKGIRVNNIGPGAMNTP--INAEK-------------FADPVQRADVESMIPM------- 223
Query: 261 KGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
            G   + +++A  A +LAS ++ YV+G  L  DGG+T
Sbjct: 224 -GYIGKPEEVAAVAAFLASSQASYVTGITLFADGGMT 259

>pdb|3AY7|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 G259a Mutant Length = 269

Iteration: 1
 Score = 99.8 bits (247), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 84/277 (30%), Positives = 131/277 (47%), Gaps = 32/277 (11%)
Query: 26  HRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIA---DVEDTLGSVLASTLAPAPVTF 82
           +  L+ KV +ITGG+ G+G A    F +  AKVVI    + E+ L +      A      
Sbjct: 10  YTDLKDKVVVITGGSTGLGRAMAVRFGQEEAKVVINYYNNEEEALDAKKEVEEAGGQAII 69
Query: 83  VHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNV 142
           V  DV+ EED+ NL+ + +  +G LD++ NNAGV      H    +   D ++ V+  N+
Sbjct: 70  VQGDVTKEEDVVNLVQTAIKEFGTLDVMINNAGVENPVPSH----ELSLDNWNKVIDTNL 125
Query: 143 KGMALGIKHAARVMI-NRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELG 201
            G  LG + A +  + N   G +I+ +SV  ++       Y ASK  +  +T+  A E  
Sbjct: 126 TGAFLGSREAIKYFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEYA 185
Query: 202 RYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQK-EVRKMEEFVSGLGNL 260
             GIRVN I P  + T   +NA +             F  P Q+ +V  M          
Sbjct: 186 PKGIRVNNIGPGAMNTP--INAEK-------------FADPVQRADVESMIPM------- 223
Query: 261 KGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
            G   + +++A  A +LAS ++ YV+G  L  DGG+T
Sbjct: 224 -GYIGKPEEVAAVAAFLASSQASYVTGITLFADGGMT 259

>pdb|3AY6|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 A258f Mutant In Complex With Nadh And D-Glucose Length = 269

Iteration: 1
 Score = 99.8 bits (247), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 84/277 (30%), Positives = 131/277 (47%), Gaps = 32/277 (11%)
Query: 26  HRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIA---DVEDTLGSVLASTLAPAPVTF 82
           +  L+ KV +ITGG+ G+G A    F +  AKVVI    + E+ L +      A      
Sbjct: 10  YTDLKDKVVVITGGSTGLGRAMAVRFGQEEAKVVINYYNNEEEALDAKKEVEEAGGQAII 69
Query: 83  VHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNV 142
           V  DV+ EED+ NL+ + +  +G LD++ NNAGV      H    +   D ++ V+  N+
Sbjct: 70  VQGDVTKEEDVVNLVQTAIKEFGTLDVMINNAGVENPVPSH----ELSLDNWNKVIDTNL 125
Query: 143 KGMALGIKHAARVMI-NRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELG 201
            G  LG + A +  + N   G +I+ +SV  ++       Y ASK  +  +T+  A E  
Sbjct: 126 TGAFLGSREAIKYFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEYA 185
Query: 202 RYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQK-EVRKMEEFVSGLGNL 260
             GIRVN I P  + T   +NA +             F  P Q+ +V  M          
Sbjct: 186 PKGIRVNNIGPGAMNTP--INAEK-------------FADPVQRADVESMIPM------- 223
Query: 261 KGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
            G   + +++A  A +LAS ++ YV+G  L  DGG+T
Sbjct: 224 -GYIGKPEEVAAVAAFLASSQASYVTGITLFADGGMT 259

>pdb|3GRP|A Chain A, 2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Bartonella Henselae Length = 266

Iteration: 1
 Score = 99.8 bits (247), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 79/279 (28%), Positives = 130/279 (46%), Gaps = 29/279 (10%)
Query: 18  AWDDAPPSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAP 77
           A    P S  +L G+ A++TG   GIGEA  R F   GA V +    +     +A+ L  
Sbjct: 14  AQTQGPGSMFKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGK 73
Query: 78  APVTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNV 137
               F   ++S  + I+ L          +DIL NNAG+     +    +     ++D+V
Sbjct: 74  DVFVF-SANLSDRKSIKQLAEVAEREMEGIDILVNNAGI----TRDGLFVRMQDQDWDDV 128
Query: 138 MRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAA 197
           + VN+   +   +     M+ R  G II+  S+ GV+G  G   Y A+K  ++G +K  A
Sbjct: 129 LAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVGNPGQTNYCAAKAGLIGFSKALA 188
Query: 198 CELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGL 257
            E+    I VNCI+P  + ++M           E++ E +   IP ++          G+
Sbjct: 189 QEIASRNITVNCIAPGFIKSAM------TDKLNEKQKEAIMAMIPMKR---------MGI 233
Query: 258 GNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGV 296
           G         ++IA A +YLASDE+ Y++G  L ++GG+
Sbjct: 234 G---------EEIAFATVYLASDEAAYLTGQTLHINGGM 263

>pdb|3SX2|A Chain A, Crystal Structure Of A Putative 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Mycobacterium Paratuberculosis In Complex With Nad Length = 278

Iteration: 1
 Score = 99.0 bits (245), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 95/295 (32%), Positives = 137/295 (46%), Gaps = 51/295 (17%)
Query: 25  SHRRLEGKVAIITGGARGIGEA-AVRLFARHGAKVVIADVEDTLGSVLASTLAP----AP 79
           S   L GKVA ITG ARG G A AVRL A  GA ++  D+ D + SV      P    A 
Sbjct: 7   SEGPLTGKVAFITGAARGQGRAHAVRL-AADGADIIAVDLCDQIASVPYPLATPEELAAT 65
Query: 80  VTFV----------HCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDF 129
           V  V            DV   E +   + + +   GRLDI+  NAG+        + +  
Sbjct: 66  VKLVEDIGSRIVARQADVRDRESLSAALQAGLDELGRLDIVVANAGI--------APMSA 117
Query: 130 DADEFDNVMRVNVKGMALGIKHAARVMINRG-GGCIISTASVAGVMG----GLGPHAYTA 184
             D + +V+ VN+ G+   IK A   ++ +G GG I+  +S AG+ G      G   Y A
Sbjct: 118 GDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGSADPGSVGYVA 177
Query: 185 SKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQ 244
           +KH +VGL +  A  L    IRVN I P GV T M+ N +                  ++
Sbjct: 178 AKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEF------------------TR 219
Query: 245 KEVRKM---EEFVSGLGN-LKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
           + + KM    +    +GN +    L  +D+A A  +L SD++RY++G  L VD G
Sbjct: 220 EWLAKMAAATDTPGAMGNAMPVEVLAPEDVANAVAWLVSDQARYITGVTLPVDAG 274

>pdb|3PK0|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE SDR FROM Mycobacterium Smegmatis Length = 262

Iteration: 1
 Score = 98.6 bits (244), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 79/279 (28%), Positives = 123/279 (44%), Gaps = 36/279 (12%)
Query: 23  PPSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVI-----ADVEDTLGSVLASTLAP 77
           P S   L+G+  ++TGG +GIG     +FAR GA V +     AD++  +  +    L  
Sbjct: 2   PGSMFDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADL--DQLGS 59
Query: 78  APVTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNV 137
             V  V  DVS     + L    V  +G +D++  NAGV         +     ++ + +
Sbjct: 60  GKVIGVQTDVSDRAQCDALAGRAVEEFGGIDVVCANAGVF----PDAPLATMTPEQLNGI 115
Query: 138 MRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGL-GPHAYTASKHAIVGLTKNA 196
             VNV G    ++     +I  G G ++ T+S+ G + G  G   Y A+K A +G  + A
Sbjct: 116 FAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPITGYPGWSHYGATKAAQLGFMRTA 175
Query: 197 ACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSG 256
           A EL  + I VN I P  + T  L+       +GEE    M   IP+             
Sbjct: 176 AIELAPHKITVNAIMPGNIMTEGLLE------NGEEYIASMARSIPA------------- 216
Query: 257 LGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
                G     +DI   A +LA+ E+ Y++G  + VDGG
Sbjct: 217 -----GALGTPEDIGHLAAFLATKEAGYITGQAIAVDGG 250

>pdb|3IJR|A Chain A, 2.05 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' In Complex With Nad+ Length = 291

Iteration: 1
 Score = 98.2 bits (243), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 78/280 (27%), Positives = 133/280 (47%), Gaps = 45/280 (16%)
Query: 27  RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIA------DVEDTLGSVLASTLAPAPV 80
            +L+GK  +ITGG  GIG A    FA+ GA + IA      D  +T   V    +     
Sbjct: 43  EKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVK---C 99
Query: 81  TFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRV 140
             +  D+S E+  ++++  TV + G L+IL NN   +  Q   + +    A++ +   R+
Sbjct: 100 VLLPGDLSDEQHCKDIVQETVRQLGSLNILVNN---VAQQYPQQGLEYITAEQLEKTFRI 156
Query: 141 NVKGMALGIKHAARVMIN--RGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAAC 198
           N+        H  +  ++  + G  II+TAS+    G      Y+A+K AIV  T++ + 
Sbjct: 157 NI----FSYFHVTKAALSHLKQGDVIINTASIVAYEGNETLIDYSATKGAIVAFTRSLSQ 212
Query: 199 ELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFG--IPSQKEVRKMEEFVSG 256
            L + GIRVN ++P  + T ++ +++       +E +   FG  +P Q+  +  E     
Sbjct: 213 SLVQKGIRVNGVAPGPIWTPLIPSSF-------DEKKVSQFGSNVPXQRPGQPYE----- 260
Query: 257 LGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGV 296
                        +A A +YLAS +S YV+G  + V+GGV
Sbjct: 261 -------------LAPAYVYLASSDSSYVTGQXIHVNGGV 287

>pdb|4IIN|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier Protein]reductase From Helicobacter Pylori 26695 Complexed With Nad+ Length = 271

Iteration: 1
 Score = 98.2 bits (243), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 130/274 (47%), Gaps = 35/274 (12%)
Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVI-----ADVEDTLGSVLASTLAPAPVTF 82
           +  GK  +ITG ++GIG    +  A  G KV I     A+V D L + L      A V  
Sbjct: 26  QFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAV-- 83
Query: 83  VHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNV 142
           +  D + E D    I + V   G L  L NNAGV+    + K  I    ++F +V+  N+
Sbjct: 84  IKFDAASESDFIEAIQTIVQSDGGLSYLVNNAGVV----RDKLAIKMKTEDFHHVIDNNL 139
Query: 143 KGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGR 202
               +G + A +VM     G +++ AS+ G  G +G   Y+ASK  ++ ++K+ A E   
Sbjct: 140 TSAFIGCREALKVMSKSRFGSVVNVASIIGERGNMGQTNYSASKGGMIAMSKSFAYEGAL 199
Query: 203 YGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKG 262
             IR N ++P  + T M  NA  N  D  + D   N  IP  +           LG+   
Sbjct: 200 RNIRFNSVTPGFIETDM--NA--NLKDELKADYVKN--IPLNR-----------LGS--- 239
Query: 263 TTLRSKDIAEAALYLASDESRYVSGHNLVVDGGV 296
               +K++AEA  +L SD S Y++G  L V+GG+
Sbjct: 240 ----AKEVAEAVAFLLSDHSSYITGETLKVNGGL 269

>pdb|3QLJ|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Mycobacterium Avium Length = 322

Iteration: 1
 Score = 98.2 bits (243), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 72/208 (34%), Positives = 108/208 (51%), Gaps = 22/208 (10%)
Query: 23  PPSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLAS--------- 73
           P S   ++G+V I+TG   GIG A    FA  GA+VV+ D+   L    AS         
Sbjct: 19  PGSMGVVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVV 78
Query: 74  ---TLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFD 130
              T A         +V+  +    LI + V  +G LD+L NNAG++    + + I +  
Sbjct: 79  DEITAAGGEAVADGSNVADWDQAAGLIQTAVETFGGLDVLVNNAGIV----RDRMIANTS 134
Query: 131 ADEFDNVMRVNVKGMALGIKHAARVM--INRGG----GCIISTASVAGVMGGLGPHAYTA 184
            +EFD V+ V++KG    ++HAA     +++ G    G II+T+S AG+ G +G   Y+A
Sbjct: 135 EEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQGSVGQGNYSA 194
Query: 185 SKHAIVGLTKNAACELGRYGIRVNCISP 212
           +K  I  LT   A E+GRYG+ VN I+P
Sbjct: 195 AKAGIATLTLVGAAEMGRYGVTVNAIAP 222

>pdb|2Q2Q|A Chain A, Structure Of D-3-Hydroxybutyrate Dehydrogenase From Pseudomonas Putida Length = 255

Iteration: 1
 Score = 97.8 bits (242), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 82/270 (30%), Positives = 126/270 (46%), Gaps = 23/270 (8%)
Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVH--CD 86
           L+GK A++TG   GIG    ++ AR GA +V+    D   ++  + +A   V  VH   D
Sbjct: 2   LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPAL--AEIARHGVKAVHHPAD 59
Query: 87  VSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIID-FDADEFDNVMRVNVKGM 145
           +S    IE L       +G +DIL NNAG+     +H + ++ F  + +D ++ +N+  +
Sbjct: 60  LSDVAQIEALFALAEREFGGVDILVNNAGI-----QHVAPVEQFPLESWDKIIALNLSAV 114
Query: 146 ALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGI 205
             G + A   M  R  G II+ ASV G++G  G  AY A+KH +VGLTK    E     +
Sbjct: 115 FHGTRLALPGMRARNWGRIINIASVHGLVGSTGKAAYVAAKHGVVGLTKVVGLETATSNV 174
Query: 206 RVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL 265
             N I P  V T ++          + +D   N G P Q +   + E    L       +
Sbjct: 175 TCNAICPGWVLTPLV--------QKQIDDRAANGGDPLQAQHDLLAEKQPSL-----AFV 221
Query: 266 RSKDIAEAALYLASDESRYVSGHNLVVDGG 295
             + + E  L+L S+    V G    VDGG
Sbjct: 222 TPEHLGELVLFLCSEAGSQVRGAAWNVDGG 251

>pdb|3ENN|A Chain A, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE FROM BRUCELLA Melitensis (P43212) Length = 249

Iteration: 1
 Score = 97.8 bits (242), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 80/274 (29%), Positives = 127/274 (46%), Gaps = 29/274 (10%)
Query: 23  PPSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTF 82
           P S   L G+ A++TG   G+GEA  R     GA V +    +     LA+ L      F
Sbjct: 2   PGSMFDLTGRKALVTGATGGLGEAIARALHAQGAIVGLHGTREEKLKELAAELGERIFVF 61
Query: 83  VHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNV 142
              ++S  E ++ L        G +DIL NNAG+     +    +    +++D V+ VN+
Sbjct: 62  -PANLSDREAVKALGQKAEEEMGGVDILVNNAGI----TRDGLFVRMSDEDWDAVLTVNL 116
Query: 143 KGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGR 202
             +    +     M+ R  G II+  S+ GV G  G   Y ASK  ++G +K+ A E+  
Sbjct: 117 TSVFNLTRELTHPMMRRRNGRIINITSIVGVTGNPGQANYCASKAGLIGFSKSLAQEIAS 176
Query: 203 YGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKG 262
             + VNCI+P  + ++M           E++ + +   IP ++          G+G    
Sbjct: 177 RNVTVNCIAPGFIESAM------TGKLNEKQKDAIMGNIPMKR---------MGVG---- 217
Query: 263 TTLRSKDIAEAALYLASDESRYVSGHNLVVDGGV 296
                 DIA A +YLASDE+ YV+G  L V+GG+
Sbjct: 218 -----ADIAAAVVYLASDEAAYVTGQTLHVNGGM 246

>pdb|3I3O|A Chain A, 2.06 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' In Complex With Nad-acetone Length = 291

Iteration: 1
 Score = 97.4 bits (241), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 78/280 (27%), Positives = 133/280 (47%), Gaps = 45/280 (16%)
Query: 27  RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIA------DVEDTLGSVLASTLAPAPV 80
            +L+GK  +ITGG  GIG A    FA+ GA + IA      D  +T   V    +     
Sbjct: 43  EKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVK---C 99
Query: 81  TFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRV 140
             +  D+S E+  ++++  TV + G L+IL NN   +  Q   + +    A++ +   R+
Sbjct: 100 VLLPGDLSDEQHCKDIVQETVRQLGSLNILVNN---VAQQYPQQGLEYITAEQLEKTFRI 156
Query: 141 NVKGMALGIKHAARVMIN--RGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAAC 198
           N+        H  +  ++  + G  II+TAS+    G      Y+A+K AIV  T++ + 
Sbjct: 157 NI----FSYFHVTKAALSHLKQGDVIINTASIVAYEGNETLIDYSATKGAIVAFTRSLSQ 212
Query: 199 ELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFG--IPSQKEVRKMEEFVSG 256
            L + GIRVN ++P  + T ++ +++       +E +   FG  +P Q+  +  E     
Sbjct: 213 SLVQKGIRVNGVAPGPIWTPLIPSSF-------DEKKVSQFGSNVPMQRPGQPYE----- 260
Query: 257 LGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGV 296
                        +A A +YLAS +S YV+G  + V+GGV
Sbjct: 261 -------------LAPAYVYLASSDSSYVTGQMIHVNGGV 287

>pdb|4FGS|A Chain A, Crystal Structure Of A Probable Dehydrogenase Protein Length = 273

Iteration: 1
 Score = 97.1 bits (240), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 130/270 (48%), Gaps = 26/270 (9%)
Query: 27  RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADV-EDTLGSVLASTLAPAPVTFVHC 85
           +RL  K+A+ITG   GIG AA + F   GA+V I    +D L + +A     A    +  
Sbjct: 25  QRLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGA--VGIQA 82
Query: 86  DVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGM 145
           D +   +++ L     +  GR+D+L+ NAG  G+      + +   +++D+    NVKG+
Sbjct: 83  DSANLAELDRLYEKVKAEAGRIDVLFVNAGG-GSXLPLGEVTE---EQYDDTFDRNVKGV 138
Query: 146 ALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGI 205
              ++ A  ++    G  ++ T S AG  G      Y ASK A+    +N   +L   GI
Sbjct: 139 LFTVQKALPLLAR--GSSVVLTGSTAGSTGTPAFSVYAASKAALRSFARNWILDLKDRGI 196
Query: 206 RVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL 265
           R+N +SP    T+ LV     +G    + + +   + +Q                 G   
Sbjct: 197 RINTLSPGPTETTGLVEL---AGKDPVQQQGLLNALAAQVP--------------XGRVG 239
Query: 266 RSKDIAEAALYLASDESRYVSGHNLVVDGG 295
           R++++A AAL+LASD+S +V+G  L VDGG
Sbjct: 240 RAEEVAAAALFLASDDSSFVTGAELFVDGG 269

>pdb|2NM0|A Chain A, Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl Carrier Protein Reductase From Streptomyces Coelicolor A3(2) Length = 253

Iteration: 1
 Score = 97.1 bits (240), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 81/277 (29%), Positives = 123/277 (44%), Gaps = 46/277 (16%)
Query: 23  PPSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTF 82
           P SH     +  ++TGG RGIG A  R FA  G KV I            S   P     
Sbjct: 16  PRSHM---SRSVLVTGGNRGIGLAIARAFADAGDKVAI---------TYRSGEPPEGFLA 63
Query: 83  VHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNV 142
           V CD++  E +E         +G +++L  NAGV     K + ++    ++F +V+  N+
Sbjct: 64  VKCDITDTEQVEQAYKEIEETHGPVEVLIANAGVT----KDQLLMRMSEEDFTSVVETNL 119
Query: 143 KGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGR 202
            G    +K A R M+    G ++  +SV G++G  G   Y ASK  +VG  ++ A ELG 
Sbjct: 120 TGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGSAGQANYAASKAGLVGFARSLARELGS 179
Query: 203 YGIRVNCISPFGVATSM---LVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGN 259
             I  N ++P  V T M   L +  R +             I SQ  +            
Sbjct: 180 RNITFNVVAPGFVDTDMTKVLTDEQRAN-------------IVSQVPL------------ 214
Query: 260 LKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGV 296
             G   R ++IA    +LASD++ Y++G  + VDGG+
Sbjct: 215 --GRYARPEEIAATVRFLASDDASYITGAVIPVDGGL 249

>pdb|3V1T|C Chain C, Crystal Structure Of A Putative Ketoacyl Reductase (Fabg4) From Mycobacterium Tuberculosis H37rv At 1.9 Angstrom Resolution Length = 462

Iteration: 1
 Score = 97.1 bits (240), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 89/292 (30%), Positives = 137/292 (46%), Gaps = 44/292 (15%)
Query: 12  QGIHVLAWDDAPPS--HRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGS 69
           Q   V A D  PP+   + L+GKVAI+TG ARGIG     +FAR GA VV  DVE +   
Sbjct: 200 QVFSVGADDSTPPADWEKPLDGKVAIVTGAARGIGATIAEVFARDGAHVVAIDVE-SAAE 258
Query: 70  VLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYG-RLDILYNNAGVLGNQRKHKSIID 128
            LA T +    T +  DV+ ++ ++ +       +G + DIL NNAG+     + K + +
Sbjct: 259 NLAETASKVGGTALWLDVTADDAVDKISEHLRDHHGGKADILVNNAGIT----RDKLLAN 314
Query: 129 FDADEFDNVMRVNVKGMALGIKHAARVMINRG----GGCIISTASVAGVMGGLGPHAYTA 184
            D   +D V+ VN+    L        ++  G    GG +I  +S+AG+ G  G   Y  
Sbjct: 315 MDDARWDAVLAVNL----LAPLRLTEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYAT 370
Query: 185 SKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIP-S 243
           +K  ++G+T+  A  L   GI +N ++P  + T M                     IP +
Sbjct: 371 TKAGMIGITQALAPGLAAKGITINAVAPGFIETQMTA------------------AIPLA 412
Query: 244 QKEV-RKMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDG 294
            +EV R++   + G         +  D+AEA  Y AS  S  V+G+ + V G
Sbjct: 413 TREVGRRLNSLLQGG--------QPVDVAEAIAYFASPASNAVTGNVIRVCG 456

>pdb|3Q6I|A Chain A, Crystal Structure Of Fabg4 And Coenzyme Binary Complex Length = 446

Iteration: 1
 Score = 97.1 bits (240), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 89/292 (30%), Positives = 137/292 (46%), Gaps = 44/292 (15%)
Query: 12  QGIHVLAWDDAPPS--HRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGS 69
           Q   V A D  PP+   + L+GKVAI+TG ARGIG     +FAR GA VV  DVE +   
Sbjct: 184 QVFSVGADDSTPPADWEKPLDGKVAIVTGAARGIGATIAEVFARDGAHVVAIDVE-SAAE 242
Query: 70  VLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYG-RLDILYNNAGVLGNQRKHKSIID 128
            LA T +    T +  DV+ ++ ++ +       +G + DIL NNAG+     + K + +
Sbjct: 243 NLAETASKVGGTALWLDVTADDAVDKISEHLRDHHGGKADILVNNAGIT----RDKLLAN 298
Query: 129 FDADEFDNVMRVNVKGMALGIKHAARVMINRG----GGCIISTASVAGVMGGLGPHAYTA 184
            D   +D V+ VN+    L        ++  G    GG +I  +S+AG+ G  G   Y  
Sbjct: 299 MDDARWDAVLAVNL----LAPLRLTEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYAT 354
Query: 185 SKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIP-S 243
           +K  ++G+T+  A  L   GI +N ++P  + T M                     IP +
Sbjct: 355 TKAGMIGITQALAPGLAAKGITINAVAPGFIETQMTA------------------AIPLA 396
Query: 244 QKEV-RKMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDG 294
            +EV R++   + G         +  D+AEA  Y AS  S  V+G+ + V G
Sbjct: 397 TREVGRRLNSLLQGG--------QPVDVAEAIAYFASPASNAVTGNVIRVCG 440

>pdb|3M1L|A Chain A, Crystal Strucutre Of A C-Terminal Trunacted Mutant Of A Putative Ketoacyl Reductase (Fabg4) From Mycobacterium Tuberculosis H37rv At 2.5 Angstrom Resolution Length = 432

Iteration: 1
 Score = 97.1 bits (240), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 89/292 (30%), Positives = 137/292 (46%), Gaps = 44/292 (15%)
Query: 12  QGIHVLAWDDAPPS--HRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGS 69
           Q   V A D  PP+   + L+GKVAI+TG ARGIG     +FAR GA VV  DVE +   
Sbjct: 176 QVFSVGADDSTPPADWEKPLDGKVAIVTGAARGIGATIAEVFARDGAHVVAIDVE-SAAE 234
Query: 70  VLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYG-RLDILYNNAGVLGNQRKHKSIID 128
            LA T +    T +  DV+ ++ ++ +       +G + DIL NNAG+     + K + +
Sbjct: 235 NLAETASKVGGTALWLDVTADDAVDKISEHLRDHHGGKADILVNNAGIT----RDKLLAN 290
Query: 129 FDADEFDNVMRVNVKGMALGIKHAARVMINRG----GGCIISTASVAGVMGGLGPHAYTA 184
            D   +D V+ VN+    L        ++  G    GG +I  +S+AG+ G  G   Y  
Sbjct: 291 MDDARWDAVLAVNL----LAPLRLTEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYAT 346
Query: 185 SKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIP-S 243
           +K  ++G+T+  A  L   GI +N ++P  + T M                     IP +
Sbjct: 347 TKAGMIGITQALAPGLAAKGITINAVAPGFIETQMTA------------------AIPLA 388
Query: 244 QKEV-RKMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDG 294
            +EV R++   + G         +  D+AEA  Y AS  S  V+G+ + V G
Sbjct: 389 TREVGRRLNSLLQGG--------QPVDVAEAIAYFASPASNAVTGNVIRVCG 432

>pdb|4FW8|A Chain A, Crystal Structure Of Fabg4 Complexed With Coenzyme Nadh Length = 454

Iteration: 1
 Score = 97.1 bits (240), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 89/292 (30%), Positives = 137/292 (46%), Gaps = 44/292 (15%)
Query: 12  QGIHVLAWDDAPPS--HRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGS 69
           Q   V A D  PP+   + L+GKVAI+TG ARGIG     +FAR GA VV  DVE +   
Sbjct: 192 QVFSVGADDSTPPADWEKPLDGKVAIVTGAARGIGATIAEVFARDGAHVVAIDVE-SAAE 250
Query: 70  VLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYG-RLDILYNNAGVLGNQRKHKSIID 128
            LA T +    T +  DV+ ++ ++ +       +G + DIL NNAG+     + K + +
Sbjct: 251 NLAETASKVGGTALWLDVTADDAVDKISEHLRDHHGGKADILVNNAGIT----RDKLLAN 306
Query: 129 FDADEFDNVMRVNVKGMALGIKHAARVMINRG----GGCIISTASVAGVMGGLGPHAYTA 184
            D   +D V+ VN+    L        ++  G    GG +I  +S+AG+ G  G   Y  
Sbjct: 307 MDDARWDAVLAVNL----LAPLRLTEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYAT 362
Query: 185 SKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIP-S 243
           +K  ++G+T+  A  L   GI +N ++P  + T M                     IP +
Sbjct: 363 TKAGMIGITQALAPGLAAKGITINAVAPGFIETQMTA------------------AIPLA 404
Query: 244 QKEV-RKMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDG 294
            +EV R++   + G         +  D+AEA  Y AS  S  V+G+ + V G
Sbjct: 405 TREVGRRLNSLLQGG--------QPVDVAEAIAYFASPASNAVTGNVIRVCG 448

>pdb|3LLS|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Mycobacterium Tuberculosis Length = 475

Iteration: 1
 Score = 97.1 bits (240), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 89/292 (30%), Positives = 137/292 (46%), Gaps = 44/292 (15%)
Query: 12  QGIHVLAWDDAPPS--HRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGS 69
           Q   V A D  PP+   + L+GKVAI+TG ARGIG     +FAR GA VV  DVE +   
Sbjct: 213 QVFSVGADDSTPPADWEKPLDGKVAIVTGAARGIGATIAEVFARDGAHVVAIDVE-SAAE 271
Query: 70  VLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYG-RLDILYNNAGVLGNQRKHKSIID 128
            LA T +    T +  DV+ ++ ++ +       +G + DIL NNAG+     + K + +
Sbjct: 272 NLAETASKVGGTALWLDVTADDAVDKISEHLRDHHGGKADILVNNAGIT----RDKLLAN 327
Query: 129 FDADEFDNVMRVNVKGMALGIKHAARVMINRG----GGCIISTASVAGVMGGLGPHAYTA 184
            D   +D V+ VN+    L        ++  G    GG +I  +S+AG+ G  G   Y  
Sbjct: 328 MDDARWDAVLAVNL----LAPLRLTEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYAT 383
Query: 185 SKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIP-S 243
           +K  ++G+T+  A  L   GI +N ++P  + T M                     IP +
Sbjct: 384 TKAGMIGITQALAPGLAAKGITINAVAPGFIETQMTA------------------AIPLA 425
Query: 244 QKEV-RKMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDG 294
            +EV R++   + G         +  D+AEA  Y AS  S  V+G+ + V G
Sbjct: 426 TREVGRRLNSLLQGG--------QPVDVAEAIAYFASPASNAVTGNVIRVCG 469

>pdb|1EDO|A Chain A, The X-Ray Structure Of Beta-Keto Acyl Carrier Protein Reductase From Brassica Napus Complexed With Nadp+ Length = 244

Iteration: 1
 Score = 96.7 bits (239), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 73/269 (27%), Positives = 130/269 (48%), Gaps = 34/269 (12%)
Query: 33  VAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPA----PVTFVHCDVS 88
           V ++TG +RGIG+A      + G KV++        +   S    A     +TF   DVS
Sbjct: 3   VVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITF-GGDVS 61
Query: 89  LEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALG 148
            E D+E ++ + +  +G +D++ NNAG+     +   +I     ++D V+ +N+ G+ L 
Sbjct: 62  KEADVEAMMKTAIDAWGTIDVVVNNAGI----TRDTLLIRMKKSQWDEVIDLNLTGVFLC 117
Query: 149 IKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVN 208
            + A ++M+ +  G II+ ASV G++G +G   Y A+K  ++G +K AA E     I VN
Sbjct: 118 TQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVN 177
Query: 209 CISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSK 268
            + P  +A+ M          GE+ ++ +   IP                   G T + +
Sbjct: 178 VVCPGFIASDMTAKL------GEDMEKKILGTIPL------------------GRTGQPE 213
Query: 269 DIAEAALYLA-SDESRYVSGHNLVVDGGV 296
           ++A    +LA S  + Y++G    +DGG+
Sbjct: 214 NVAGLVEFLALSPAASYITGQAFTIDGGI 242

>pdb|1XKQ|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE OF Unknown Function From Caenorhabditis Elegans With Cofactor Length = 280

Iteration: 1
 Score = 96.7 bits (239), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 78/281 (27%), Positives = 132/281 (46%), Gaps = 31/281 (11%)
Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIA-----DVEDTLGSVLASTLAPAPVTF 82
           R   K  IITG + GIG     LFA+ GA V I       +E+T   +L S ++   V  
Sbjct: 3   RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNS 62
Query: 83  VHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNV 142
           V  DV+ E+  + +INST+ ++G++D+L NNAG         +  D   D +   +++N+
Sbjct: 63  VVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNL 122
Query: 143 KGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGR 202
           + +    K     ++   G  +  ++ VAG         Y  +K A+   T++ A +L +
Sbjct: 123 QAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTRSTAIDLAK 182
Query: 203 YGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLK- 261
           +GIRVN +SP G+  +   NA                G+P Q      ++F + + + K 
Sbjct: 183 FGIRVNSVSP-GMVETGFTNAM---------------GMPDQAS----QKFYNFMASHKE 222
Query: 262 ----GTTLRSKDIAEAALYLAS-DESRYVSGHNLVVDGGVT 297
               G   + + IA   L+LA  + S Y+ G ++V DGG +
Sbjct: 223 CIPIGAAGKPEHIANIILFLADRNLSFYILGQSIVADGGTS 263

>pdb|2PD6|A Chain A, Structure Of Human Hydroxysteroid Dehydrogenase Type 8, Hsd17b8 Length = 264

Iteration: 1
 Score = 96.3 bits (238), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 83/287 (28%), Positives = 136/287 (47%), Gaps = 39/287 (13%)
Query: 26  HRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLA-----PAPV 80
             RL   +A++TG   GIG A     A  GA V   D++          L        P 
Sbjct: 2   QNRLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPP 61
Query: 81  TFVHC----DVSLEEDIENLINSTVSRYGRL-DILYNNAGVLGNQRKHKSIIDFDADEFD 135
              H     DVS       L+    + + R   ++ + AG+     + + ++    D++D
Sbjct: 62  RGNHAAFQADVSEARAARCLLEQVQACFSRPPSVVVSCAGIT----QDEFLLHMSEDDWD 117
Query: 136 NVMRVNVKGMALGIKHAARVMINRGG-GCIISTASVAGVMGGLGPHAYTASKHAIVGLTK 194
            V+ VN+KG  L  + AA+ +++ G  G II+ +S+ G +G +G   Y ASK  ++GLT+
Sbjct: 118 KVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVGQTNYAASKAGVIGLTQ 177
Query: 195 NAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFV 254
            AA ELGR+GIR N + P  +AT M                     +P QK V K+ E +
Sbjct: 178 TAARELGRHGIRCNSVLPGFIATPMTQK------------------VP-QKVVDKITEMI 218
Query: 255 SGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTSRN 301
             +G+L       +D+A+   +LAS++S Y++G ++ V GG+  + N
Sbjct: 219 P-MGHLG----DPEDVADVVAFLASEDSGYITGTSVEVTGGLFMAEN 260

>pdb|3EMK|A Chain A, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE From Brucella Melitensis Length = 246

Iteration: 1
 Score = 95.9 bits (237), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 78/268 (29%), Positives = 125/268 (46%), Gaps = 29/268 (10%)
Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVS 88
           L G+ A++TG   G+GEA  R     GA V +    +     LA+ L      F   ++S
Sbjct: 5   LTGRKALVTGATGGLGEAIARALHAQGAIVGLHGTREEKLKELAAELGERIFVF-PANLS 63
Query: 89  LEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALG 148
             E ++ L        G +DIL NNAG+     +    +    +++D V+ VN+  +   
Sbjct: 64  DREAVKALGQKAEEEMGGVDILVNNAGI----TRDGLFVRMSDEDWDAVLTVNLTSVFNL 119
Query: 149 IKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVN 208
            +     M+ R  G II+  S+ GV G  G   Y ASK  ++G +K+ A E+    + VN
Sbjct: 120 TRELTHPMMRRRNGRIINITSIVGVTGNPGQANYCASKAGLIGFSKSLAQEIASRNVTVN 179
Query: 209 CISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSK 268
           CI+P  + ++M           E++ + +   IP ++          G+G          
Sbjct: 180 CIAPGFIESAM------TGKLNEKQKDAIMGNIPMKR---------MGVG---------A 215
Query: 269 DIAEAALYLASDESRYVSGHNLVVDGGV 296
           DIA A +YLASDE+ YV+G  L V+GG+
Sbjct: 216 DIAAAVVYLASDEAAYVTGQTLHVNGGM 243

>pdb|2YZ7|A Chain A, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From Alcaligenes Faecalis Length = 260

Iteration: 1
 Score = 95.5 bits (236), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 85/279 (30%), Positives = 135/279 (48%), Gaps = 32/279 (11%)
Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVI------ADVEDTLGSVLASTLAPAPVTF 82
           L+GK A++TG   GIG A     A+ GA VVI       D+E    S L S        +
Sbjct: 2   LKGKKAVVTGSTSGIGLAMATELAKAGADVVINGFGQPEDIERER-STLESKFG-VKAYY 59
Query: 83  VHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIID-FDADEFDNVMRVN 141
           ++ D+S  +   + I       G LDIL NNAG+     +H + I+ F  D+++ ++ +N
Sbjct: 60  LNADLSDAQATRDFIAKAAEALGGLDILVNNAGI-----QHTAPIEEFPVDKWNAIIALN 114
Query: 142 VKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELG 201
           +  +  G   A  +M  +G G II+ AS  G++  +   AY A+KH +VGLTK  A E  
Sbjct: 115 LSAVFHGTAAALPIMQKQGWGRIINIASAHGLVASVNKSAYVAAKHGVVGLTKVTALENA 174
Query: 202 RYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLK 261
             GI  N I P  V T ++          E++ E +     SQ++   +E     L   K
Sbjct: 175 GKGITCNAICPGWVRTPLV----------EKQIEAI-----SQQKGIDIEAAARELLAEK 219
Query: 262 GTTLR---SKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
             +L+    + +  AA++L+S  +  ++G  L +DGG T
Sbjct: 220 QPSLQFVTPEQLGGAAVFLSSAAADQMTGTTLSLDGGWT 258

>pdb|3O38|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Mycobacterium Smegmatis Length = 266

Iteration: 1
 Score = 95.5 bits (236), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 71/194 (36%), Positives = 100/194 (51%), Gaps = 13/194 (6%)
Query: 26  HRRLEGKVAIITGGA-RGIGEAAVRLFARHGAKVVIADV-EDTLGSV--LASTLAPAPVT 81
           H  L+GKV ++T  A  GIG    R     GA VVI+D  E  LG      + L    V 
Sbjct: 17  HGLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVE 76
Query: 82  FVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVN 141
            V CDV+  E ++ LI  TV + GRLD+L NNAG LG Q     ++D   +E+D V+ V 
Sbjct: 77  AVVCDVTSTEAVDALITQTVEKAGRLDVLVNNAG-LGGQ---TPVVDMTDEEWDRVLNVT 132
Query: 142 VKGMALGIKHAARVMINRG---GGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAAC 198
           +  +    + A R    RG   GG I++ ASV G         Y A+K  ++ LT+ +A 
Sbjct: 133 LTSVMRATRAALRYF--RGVDHGGVIVNNASVLGWRAQHSQSHYAAAKAGVMALTRCSAI 190
Query: 199 ELGRYGIRVNCISP 212
           E   +G+R+N +SP
Sbjct: 191 EAVEFGVRINAVSP 204

>pdb|4E4Y|A Chain A, The Crystal Structure Of A Short Chain Dehydrogenase Family Protein From Francisella Tularensis Subsp. Tularensis Schu S4 Length = 244

Iteration: 1
 Score = 94.7 bits (234), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 77/271 (28%), Positives = 131/271 (48%), Gaps = 44/271 (16%)
Query: 35  IITGGARGIGEAAVRLFARHGAKVVI-ADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDI 93
           ++TGG++GIG+A V L  ++    VI  D++         + +   + F+  D++ ++DI
Sbjct: 8   LVTGGSKGIGKAVVELLLQNKNHTVINIDIQ--------QSFSAENLKFIKADLTKQQDI 59
Query: 94  ENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNV-------KGMA 146
            N+++  + +    D ++ NAG+L       SI D D +    V+ +NV       KG+ 
Sbjct: 60  TNVLD--IIKNVSFDGIFLNAGIL----IKGSIFDIDIESIKKVLDLNVWSSIYFIKGLE 113
Query: 147 LGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIR 206
             +K  A ++ N    C I+  +           AYT SK AI   TK+ A +L +Y IR
Sbjct: 114 NNLKVGASIVFNGSDQCFIAKPN---------SFAYTLSKGAIAQXTKSLALDLAKYQIR 164
Query: 207 VNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLR 266
           VN + P  V T +  N  +   +        N GI S  E +K EE    L  +     +
Sbjct: 165 VNTVCPGTVDTDLYRNLIQKYAN--------NVGI-SFDEAQKQEEKEFPLNRIA----Q 211
Query: 267 SKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
            ++IAE  ++L SD+S++ +G  + +DGG T
Sbjct: 212 PQEIAELVIFLLSDKSKFXTGGLIPIDGGYT 242

>pdb|3AWD|A Chain A, Crystal Structure Of Gox2181 Length = 260

Iteration: 1
 Score = 94.7 bits (234), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 75/274 (27%), Positives = 133/274 (48%), Gaps = 29/274 (10%)
Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPA--PVTFVHC 85
           RL+ +VAI+TGGA+ IG A V   A  GA+V+IAD+++ + +     L      V+ V  
Sbjct: 10  RLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVM 69
Query: 86  DVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGM 145
           DV+  E ++N + S   + GR+DIL   AG+  ++ K + + D    ++   + +N+ GM
Sbjct: 70  DVTNTESVQNAVRSVHEQEGRVDILVACAGICISEVKAEDMTD---GQWLKQVDINLNGM 126
Query: 146 ALGIKHAARVMINRGGGCIISTASVAGVMGGLGPH--AYTASKHAIVGLTKNAACELGRY 203
               +   R+M+ +  G I++  S++G++        AY ASK  +    ++ A E   +
Sbjct: 127 FRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQQQAAYNASKAGVHQYIRSLAAEWAPH 186
Query: 204 GIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGT 263
           GIR N ++P  + T++       +  G E+ E  +  I                G   G 
Sbjct: 187 GIRANAVAPTYIETTL-------TRFGMEKPELYDAWIA---------------GTPMGR 224
Query: 264 TLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
             +  ++A    +LASD +  ++G  + VD G T
Sbjct: 225 VGQPDEVASVVQFLASDAASLMTGAIVNVDAGFT 258

>pdb|3S55|A Chain A, Crystal Structure Of A Putative Short-Chain DehydrogenaseREDUCTASE From Mycobacterium Abscessus Bound To Nad Length = 281

Iteration: 1
 Score = 94.4 bits (233), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 83/289 (28%), Positives = 132/289 (45%), Gaps = 27/289 (9%)
Query: 23  PPSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADV---EDTLGSVLAS------ 73
           P S    EGK A+ITGGARG+G +     A  GA + I D     D +G  LA+      
Sbjct: 2   PGSMADFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAE 61
Query: 74  TLAPAPVTFVHC-----DVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIID 128
           T+A    T   C     DV     +E+ +       G +DI   NAG+         + +
Sbjct: 62  TVALVEKTGRRCISAKVDVKDRAALESFVAEAEDTLGGIDIAITNAGI----STIALLPE 117
Query: 129 FDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHA 188
            ++ ++D V+  N+ G    I   A  MI R  G I++ +S+ G        +Y +SK  
Sbjct: 118 VESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSANFAQASYVSSKWG 177
Query: 189 IVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVR 248
           ++GLTK AA +L  YGI VN ++P  + T M  N +       + ++      P+ K+V 
Sbjct: 178 VIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEK------PTLKDV- 230
Query: 249 KMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
             E   + L       L+ +++  A L+L  + S +++G  L +D G T
Sbjct: 231 --ESVFASLHLQYAPFLKPEEVTRAVLFLVDEASSHITGTVLPIDAGAT 277

>pdb|1XHL|A Chain A, Crystal Structure Of Putative Tropinone Reductase-Ii From Caenorhabditis Elegans With Cofactor And Substrate Length = 297

Iteration: 1
 Score = 94.4 bits (233), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 77/276 (27%), Positives = 133/276 (48%), Gaps = 23/276 (8%)
Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIA-----DVEDTLGSVLASTLAPAPVTF 82
           R  GK  IITG + GIG +A  +FA+ GA+V I       +E+T   +L + +    +  
Sbjct: 23  RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINA 82
Query: 83  VHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNV 142
           V  DV+     +++IN+T++++G++DIL NNAG   N     +  D   + +    ++N 
Sbjct: 83  VVADVTEASGQDDIINTTLAKFGKIDILVNNAG--ANLADGTANTDQPVELYQKTFKLNF 140
Query: 143 KGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGR 202
           + +    +     +I   G  +  ++ VAG     G   Y  +K A+   T+  A +L +
Sbjct: 141 QAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTAIDLIQ 200
Query: 203 YGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKG 262
           +G+RVN +SP  VAT  +       G  E   + +   I S+KE   +           G
Sbjct: 201 HGVRVNSVSPGAVATGFM----GAMGLPETASDKLYSFIGSRKECIPV-----------G 245
Query: 263 TTLRSKDIAEAALYLAS-DESRYVSGHNLVVDGGVT 297
              + ++IA   ++LA  + S Y+ G ++V DGG T
Sbjct: 246 HCGKPEEIANIIVFLADRNLSSYIIGQSIVADGGST 281

>pdb|1XQ1|A Chain A, X-Ray Structure Of Putative Tropinone Reducatse From Arabidopsis Thaliana Gene At1g07440 Length = 266

Iteration: 1
 Score = 94.0 bits (232), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 79/272 (29%), Positives = 128/272 (47%), Gaps = 30/272 (11%)
Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKV-VIADVEDTLGSVLASTLAPA-PVTFVHCD 86
           L+ K  ++TGG +GIG A V  FA  GA +   A  E  L   L+        VT   CD
Sbjct: 12  LKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCD 71
Query: 87  VSLEEDIENLINSTVSRYG-RLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGM 145
            SL  + E L+ +  S +G +LDIL NN G +    + K  +D+ A++F   +  N++  
Sbjct: 72  ASLRPEREKLMQTVSSMFGGKLDILINNLGAI----RSKPTLDYTAEDFSFHISTNLESA 127
Query: 146 ALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGI 205
               + A  ++   G G II  +S+AGV+       Y+A+K A+  L +N ACE    GI
Sbjct: 128 YHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWASDGI 187
Query: 206 RVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL 265
           R N ++P  +AT +         +   +DE     I S+K + +  E             
Sbjct: 188 RANAVAPAVIATPL--------AEAVYDDEFKKVVI-SRKPLGRFGE------------- 225
Query: 266 RSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
             ++++    +L    + Y++G  + VDGG+T
Sbjct: 226 -PEEVSSLVAFLCMPAASYITGQTICVDGGLT 256

>pdb|3OP4|A Chain A, Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Vibrio Cholerae O1 Biovar Eltor Str. N16961 In Complex With Nadp+ Length = 248

Iteration: 1
 Score = 93.6 bits (231), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 74/268 (27%), Positives = 126/268 (47%), Gaps = 31/268 (11%)
Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVS 88
           LEGKVA++TG +RGIG+A   L A  GAKV+     ++    ++  L          +V+
Sbjct: 7   LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNG-KGXALNVT 65
Query: 89  LEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALG 148
             E IE ++ +    +G +DIL NNAG+     +   +     +E+ ++   N+  +   
Sbjct: 66  NPESIEAVLKAITDEFGGVDILVNNAGIT----RDNLLXRXKEEEWSDIXETNLTSIFRL 121
Query: 149 IKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVN 208
            K   R    +  G II+  SV G  G  G   Y A+K  ++G TK+ A E+   G+ VN
Sbjct: 122 SKAVLRGXXKKRQGRIINVGSVVGTXGNAGQANYAAAKAGVIGFTKSXAREVASRGVTVN 181
Query: 209 CISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSG-LGNLKGTTLRS 267
            ++P  + T              +  + +N     ++    + +  +G LG+        
Sbjct: 182 TVAPGFIET--------------DXTKALN----DEQRTATLAQVPAGRLGD-------P 216
Query: 268 KDIAEAALYLASDESRYVSGHNLVVDGG 295
           ++IA A  +LAS E+ Y++G  L V+GG
Sbjct: 217 REIASAVAFLASPEAAYITGETLHVNGG 244

>pdb|2DTD|A Chain A, Structure Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (aldt) In Ligand-free Form Length = 264

Iteration: 1
 Score = 92.4 bits (228), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 72/271 (26%), Positives = 123/271 (45%), Gaps = 31/271 (11%)
Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVS 88
           L  KV I+TG + GIG A    F   G+KV+   + D            A    + CDV+
Sbjct: 6   LRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDP---------GEAKYDHIECDVT 56
Query: 89  LEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALG 148
             + ++  I+     YG + +L NNAG+      +  I      E+  ++ VN+ G    
Sbjct: 57  NPDQVKASIDHIFKEYGSISVLVNNAGI----ESYGKIESMSMGEWRRIIDVNLFGYYYA 112
Query: 149 IKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVN 208
            K A   MI      I++ +SV   +      AY  SKHA++GLTK+ A +     +R N
Sbjct: 113 SKFAIPYMIRSRDPSIVNISSVQASIITKNASAYVTSKHAVIGLTKSIALDYAPL-LRCN 171
Query: 209 CISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL--R 266
            + P  + T ++    R + + E   + M           ++E+ +S  G+        +
Sbjct: 172 AVCPATIDTPLV----RKAAELEVGSDPM-----------RIEKKISEWGHEHPMQRIGK 216
Query: 267 SKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
            +++A A  +LAS E+ +++G  L VDGG++
Sbjct: 217 PQEVASAVAFLASREASFITGTCLYVDGGLS 247

>pdb|2WDZ|A Chain A, Crystal Structure Of The Short Chain Dehydrogenase Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter Sphaeroides In Complex With Nad+ And 1,2-Pentandiol Length = 254

Iteration: 1
 Score = 92.0 bits (227), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 123/274 (44%), Gaps = 33/274 (12%)
Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDV 87
           RL+G  A +TG   GIG    R FA  GA++++ D E       A  L  A    +  DV
Sbjct: 8   RLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVADV 67
Query: 88  SLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMAL 147
           + + +      +       + IL N+AG+    R H ++   DA  +  VM VNV GM  
Sbjct: 68  T-DAEAMTAAAAEAEAVAPVSILVNSAGI---ARLHDALETDDA-TWRQVMAVNVDGMFW 122
Query: 148 GIKHAARVMINRGGGCIISTASVAGVMGGLGPHA--YTASKHAIVGLTKNAACELGRYGI 205
             +   R M+ RG G I++  S++G +      A  Y ASK A+  LT+  A E    G+
Sbjct: 123 ASRAFGRAMVARGAGAIVNLGSMSGTIVNRPQFASSYMASKGAVHQLTRALAAEWAGRGV 182
Query: 206 RVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLK--GT 263
           RVN ++P  VAT M +                        ++R+  E      ++   G 
Sbjct: 183 RVNALAPGYVATEMTL------------------------KMRERPELFETWLDMTPMGR 218
Query: 264 TLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
                +IA AAL+LAS  + YV+G  L VDGG T
Sbjct: 219 CGEPSEIAAAALFLASPAASYVTGAILAVDGGYT 252

>pdb|1AHI|A Chain A, 7 Alpha-Hydroxysteroid Dehydrogenase Complexed With Nadh And 7-Oxo Glycochenodeoxycholic Acid Length = 255

Iteration: 1
 Score = 92.0 bits (227), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 83/270 (30%), Positives = 127/270 (47%), Gaps = 30/270 (11%)
Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVE-DTLGSVLASTLAPAPVTFV-HC 85
           RL+GK AIITG   GIG+     FA  GA VV++D+  D    V+          F   C
Sbjct: 8   RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRC 67
Query: 86  DVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGM 145
           D++ E+++  L +  +S+ G++DIL NNAG  G +       D    +F     +NV   
Sbjct: 68  DITSEQELSALADFAISKLGKVDILVNNAGGGGPKP-----FDMPMADFRRAYELNVFSF 122
Query: 146 ALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGI 205
               +  A  M   GGG I++  S+A     +   +Y +SK A   L +N A +LG   I
Sbjct: 123 FHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEKNI 182
Query: 206 RVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL 265
           RVN I+P     ++L +A ++    E E + +         +R++ +             
Sbjct: 183 RVNGIAP----GAILTDALKSVITPEIEQKML-----QHTPIRRLGQ------------- 220
Query: 266 RSKDIAEAALYLASDESRYVSGHNLVVDGG 295
             +DIA AAL+L S  + +VSG  L V GG
Sbjct: 221 -PQDIANAALFLCSPAASWVSGQILTVSGG 249

>pdb|2ZK7|A Chain A, Structure Of A C-Terminal Deletion Mutant Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (Aldt) Length = 257

Iteration: 1
 Score = 92.0 bits (227), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 72/271 (26%), Positives = 123/271 (45%), Gaps = 31/271 (11%)
Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVS 88
           L  KV I+TG + GIG A    F   G+KV+   + D            A    + CDV+
Sbjct: 13  LRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDP---------GEAKYDHIECDVT 63
Query: 89  LEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALG 148
             + ++  I+     YG + +L NNAG+      +  I      E+  ++ VN+ G    
Sbjct: 64  NPDQVKASIDHIFKEYGSISVLVNNAGI----ESYGKIESMSMGEWRRIIDVNLFGYYYA 119
Query: 149 IKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVN 208
            K A   MI      I++ +SV   +      AY  SKHA++GLTK+ A +     +R N
Sbjct: 120 SKFAIPYMIRSRDPSIVNISSVQASIITKNASAYVTSKHAVIGLTKSIALDYAPL-LRCN 178
Query: 209 CISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL--R 266
            + P  + T ++    R + + E   + M           ++E+ +S  G+        +
Sbjct: 179 AVCPATIDTPLV----RKAAELEVGSDPM-----------RIEKKISEWGHEHPMQRIGK 223
Query: 267 SKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
            +++A A  +LAS E+ +++G  L VDGG++
Sbjct: 224 PQEVASAVAFLASREASFITGTCLYVDGGLS 254

>pdb|1U7T|A Chain A, Crystal Structure Of AbadHSD10 WITH A BOUND INHIBITOR Length = 261

Iteration: 1
 Score = 91.7 bits (226), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 71/204 (34%), Positives = 106/204 (51%), Gaps = 9/204 (4%)
Query: 27  RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCD 86
           R ++G VA+ITGGA G+G A        GA  V+ D+ ++ G   A  L    V F   D
Sbjct: 6   RSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCV-FAPAD 64
Query: 87  VSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKH--KSIIDFDADEFDNVMRVNVKG 144
           V+ E+D++  +     ++GR+D+  N AG+    + +  K       ++F  V+ VN+ G
Sbjct: 65  VTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMG 124
Query: 145 MALGIKHAARVM----INRGG--GCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAAC 198
               I+  A  M     ++GG  G II+TASVA   G +G  AY+ASK  IVG+T   A 
Sbjct: 125 TFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIAR 184
Query: 199 ELGRYGIRVNCISPFGVATSMLVN 222
           +L   GIRV  I+P    T +L +
Sbjct: 185 DLAPIGIRVMTIAPGLFGTPLLTS 208

>pdb|1SO8|A Chain A, Abeta-bound Human Abad Structure [also Known As 3-hydroxyacyl-coa Dehydrogenase Type Ii (type Ii Hadh), Endoplasmic Reticulum- Associated Amyloid Beta-peptide Binding Protein (erab)] Length = 261

Iteration: 1
 Score = 91.7 bits (226), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 71/204 (34%), Positives = 106/204 (51%), Gaps = 9/204 (4%)
Query: 27  RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCD 86
           R ++G VA+ITGGA G+G A        GA  V+ D+ ++ G   A  L    V F   D
Sbjct: 6   RSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCV-FAPAD 64
Query: 87  VSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKH--KSIIDFDADEFDNVMRVNVKG 144
           V+ E+D++  +     ++GR+D+  N AG+    + +  K       ++F  V+ VN+ G
Sbjct: 65  VTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMG 124
Query: 145 MALGIKHAARVM----INRGG--GCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAAC 198
               I+  A  M     ++GG  G II+TASVA   G +G  AY+ASK  IVG+T   A 
Sbjct: 125 TFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIAR 184
Query: 199 ELGRYGIRVNCISPFGVATSMLVN 222
           +L   GIRV  I+P    T +L +
Sbjct: 185 DLAPIGIRVMTIAPGLFGTPLLTS 208

>pdb|2O23|A Chain A, The Structure Of Wild-Type Human Hadh2 (17beta-Hydroxysteroid Dehydrogenase Type 10) Bound To Nad+ At 1.2 A Length = 265

Iteration: 1
 Score = 91.7 bits (226), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 71/204 (34%), Positives = 106/204 (51%), Gaps = 9/204 (4%)
Query: 27  RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCD 86
           R ++G VA+ITGGA G+G A        GA  V+ D+ ++ G   A  L    V F   D
Sbjct: 8   RSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCV-FAPAD 66
Query: 87  VSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKH--KSIIDFDADEFDNVMRVNVKG 144
           V+ E+D++  +     ++GR+D+  N AG+    + +  K       ++F  V+ VN+ G
Sbjct: 67  VTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMG 126
Query: 145 MALGIKHAARVM----INRGG--GCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAAC 198
               I+  A  M     ++GG  G II+TASVA   G +G  AY+ASK  IVG+T   A 
Sbjct: 127 TFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIAR 186
Query: 199 ELGRYGIRVNCISPFGVATSMLVN 222
           +L   GIRV  I+P    T +L +
Sbjct: 187 DLAPIGIRVMTIAPGLFGTPLLTS 210

>pdb|1DOH|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And 4-nitro-inden-1-one Length = 283

Iteration: 1
 Score = 91.7 bits (226), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 84/306 (27%), Positives = 136/306 (44%), Gaps = 37/306 (12%)
Query: 1   MPAQVMPETNLQGIHVLAWDDAP----PSHRRLEGKVAIITGGARGIGEAAVRLFARHGA 56
           MPA   P    +      +D  P    P    LEGKVA++TG  RGIG        R G 
Sbjct: 1   MPAVTQPRGESK------YDAIPGPLGPQSASLEGKVALVTGAGRGIGREMAMELGRRGC 54
Query: 57  KVVI--ADVEDTLGSVLASTLAP-APVTFVHCDVSLEEDIENLINSTVSRYGRLDILYNN 113
           KV++  A+  ++   V+A+     +    V  +V + EDI  +    V  +G+LDI+ +N
Sbjct: 55  KVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSN 114
Query: 114 AGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGV 173
           +GV+        + D   +EFD V  +N +G     + A + +    GG +I   S+ G 
Sbjct: 115 SGVV----SFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHL--EIGGRLILMGSITGQ 168
Query: 174 MGGLGPHA-YTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRN---SGD 229
              +  HA Y+ SK AI    +  A ++    I VN ++P G+ T M     R    +G+
Sbjct: 169 AKAVPKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGE 228
Query: 230 GEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHN 289
               +E   +       +R++     GL           DIA    +LAS++  +V+G  
Sbjct: 229 NLSNEEVDEYAAVQWSPLRRV-----GL---------PIDIARVVCFLASNDGGWVTGKV 274
Query: 290 LVVDGG 295
           + +DGG
Sbjct: 275 IGIDGG 280

>pdb|1E3W|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh And 3-Keto Butyrate Length = 261

Iteration: 1
 Score = 91.7 bits (226), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 70/203 (34%), Positives = 109/203 (53%), Gaps = 11/203 (5%)
Query: 27  RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCD 86
           R ++G VA+ITGGA G+G +  +     GA  V+ DV ++ G   A  L      F   +
Sbjct: 6   RSVKGLVAVITGGASGLGLSTAKRLVGQGATAVLLDVPNSEGETEAKKLG-GNCIFAPAN 64
Query: 87  VSLEEDIENLINSTVSRYGRLDILYNNAGV---LGNQRKHKSIIDFDADEFDNVMRVNVK 143
           V+ E++++  +     ++GR+D+  N AG+   +    + K+ +    ++F  V+ VN+ 
Sbjct: 65  VTSEKEVQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHEKKNQVH-TLEDFQRVINVNLI 123
Query: 144 GMALGIKHAARVM----INRGG--GCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAA 197
           G    I+  A VM     ++GG  G II+TASVA   G +G  AY+ASK  IVG+T   A
Sbjct: 124 GTFNVIRLVAGVMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIA 183
Query: 198 CELGRYGIRVNCISPFGVATSML 220
            +L   GIRV  I+P   AT +L
Sbjct: 184 RDLAPIGIRVVTIAPGLFATPLL 206

>pdb|1E3S|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh Length = 261

Iteration: 1
 Score = 91.7 bits (226), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 70/203 (34%), Positives = 109/203 (53%), Gaps = 11/203 (5%)
Query: 27  RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCD 86
           R ++G VA+ITGGA G+G +  +     GA  V+ DV ++ G   A  L      F   +
Sbjct: 6   RSVKGLVAVITGGASGLGLSTAKRLVGQGATAVLLDVPNSEGETEAKKLG-GNCIFAPAN 64
Query: 87  VSLEEDIENLINSTVSRYGRLDILYNNAGV---LGNQRKHKSIIDFDADEFDNVMRVNVK 143
           V+ E++++  +     ++GR+D+  N AG+   +    + K+ +    ++F  V+ VN+ 
Sbjct: 65  VTSEKEVQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHEKKNQVH-TLEDFQRVINVNLI 123
Query: 144 GMALGIKHAARVM----INRGG--GCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAA 197
           G    I+  A VM     ++GG  G II+TASVA   G +G  AY+ASK  IVG+T   A
Sbjct: 124 GTFNVIRLVAGVMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIA 183
Query: 198 CELGRYGIRVNCISPFGVATSML 220
            +L   GIRV  I+P   AT +L
Sbjct: 184 RDLAPIGIRVVTIAPGLFATPLL 206

>pdb|1E6W|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh And Estradiol Length = 260

Iteration: 1
 Score = 91.7 bits (226), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 70/203 (34%), Positives = 109/203 (53%), Gaps = 11/203 (5%)
Query: 27  RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCD 86
           R ++G VA+ITGGA G+G +  +     GA  V+ DV ++ G   A  L      F   +
Sbjct: 5   RSVKGLVAVITGGASGLGLSTAKRLVGQGATAVLLDVPNSEGETEAKKLG-GNCIFAPAN 63
Query: 87  VSLEEDIENLINSTVSRYGRLDILYNNAGV---LGNQRKHKSIIDFDADEFDNVMRVNVK 143
           V+ E++++  +     ++GR+D+  N AG+   +    + K+ +    ++F  V+ VN+ 
Sbjct: 64  VTSEKEVQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHEKKNQVH-TLEDFQRVINVNLI 122
Query: 144 GMALGIKHAARVM----INRGG--GCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAA 197
           G    I+  A VM     ++GG  G II+TASVA   G +G  AY+ASK  IVG+T   A
Sbjct: 123 GTFNVIRLVAGVMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIA 182
Query: 198 CELGRYGIRVNCISPFGVATSML 220
            +L   GIRV  I+P   AT +L
Sbjct: 183 RDLAPIGIRVVTIAPGLFATPLL 205

>pdb|3GAF|A Chain A, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid Dehydrogenase From Brucella Melitensis Length = 256

Iteration: 1
 Score = 91.3 bits (225), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 83/274 (30%), Positives = 133/274 (48%), Gaps = 32/274 (11%)
Query: 24  PSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPA--PVT 81
           P H  L   VAI+TG A GIG A    FA+ GA VV+ D++      +A+ +  A     
Sbjct: 7   PFH--LNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAI 64
Query: 82  FVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVN 141
            + C+V+ E+  E +I + + ++G++ +L NNAG  G +       D    +F+   ++N
Sbjct: 65  GLECNVTDEQHREAVIKAALDQFGKITVLVNNAGGGGPKP-----FDMPMSDFEWAFKLN 119
Query: 142 VKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELG 201
           +  +    + AA  M   GGG I++ +S+AG    +   +Y +SK A+  LT+N A ++G
Sbjct: 120 LFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTNVRMASYGSSKAAVNHLTRNIAFDVG 179
Query: 202 RYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLK 261
             GIRVN I+P  + T  L                         E+ +     + LG L 
Sbjct: 180 PMGIRVNAIAPGAIKTDALATVL-------------------TPEIERAMLKHTPLGRLG 220
Query: 262 GTTLRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
                ++DIA AAL+L S  + ++SG  L V GG
Sbjct: 221 ----EAQDIANAALFLCSPAAAWISGQVLTVSGG 250

>pdb|3U0B|A Chain A, Crystal Structure Of An Oxidoreductase From Mycobacterium Smegmatis Length = 454

Iteration: 1
 Score = 91.3 bits (225), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 85/292 (29%), Positives = 132/292 (45%), Gaps = 44/292 (15%)
Query: 12  QGIHVLAWDDAPPSH--RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGS 69
           Q   V A D  PP+   + L+GKVA++TG ARGIG     +FAR GA VV  DV D    
Sbjct: 192 QVFRVGAADSTPPADWDKPLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDV-DGAAE 250
Query: 70  VLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRY-GRLDILYNNAGVLGNQRKHKSIID 128
            L         T +  DV+ ++ ++ +       + G++DIL NNAG+     + K + +
Sbjct: 251 DLKRVADKVGGTALTLDVTADDAVDKITAHVTEHHGGKVDILVNNAGI----TRDKLLAN 306
Query: 129 FDADEFDNVMRVNVKGMALGIKHAARVMINRG----GGCIISTASVAGVMGGLGPHAYTA 184
            D   +D V+ VN+    L  +     ++  G    GG +I  +S+AG+ G  G   Y  
Sbjct: 307 MDEKRWDAVIAVNL----LAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNRGQTNYAT 362
Query: 185 SKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIP-S 243
           +K  ++GL +  A  L   GI +N ++P  + T                   M   IP +
Sbjct: 363 TKAGMIGLAEALAPVLADKGITINAVAPGFIETK------------------MTEAIPLA 404
Query: 244 QKEV-RKMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDG 294
            +EV R++     G         +  D+AE   Y AS  S  V+G+ + V G
Sbjct: 405 TREVGRRLNSLFQG--------GQPVDVAELIAYFASPASNAVTGNTIRVCG 448

>pdb|3V2G|A Chain A, Crystal Structure Of A DehydrogenaseREDUCTASE FROM SINORHIZOBIUM Meliloti 1021 Length = 271

Iteration: 1
 Score = 91.3 bits (225), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 83/280 (29%), Positives = 126/280 (45%), Gaps = 53/280 (18%)
Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKV-------------VIADVEDTLGSVLASTL 75
           L GK A +TGG+RGIG A  +  A  GA V             V++++E   G  +A   
Sbjct: 29  LAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVA--- 85
Query: 76  APAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFD 135
                  +  D    E IE  I  TV   G LDIL N+AG+  +    ++ +     +FD
Sbjct: 86  -------IRADNRDAEAIEQAIRETVEALGGLDILVNSAGIWHSAPLEETTVA----DFD 134
Query: 136 NVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKN 195
            V  VN +   + I+ A+R  +  GG  I   +++A ++   G   Y+ASK A+ GLTK 
Sbjct: 135 EVXAVNFRAPFVAIRSASR-HLGDGGRIITIGSNLAELVPWPGISLYSASKAALAGLTKG 193
Query: 196 AACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVS 255
            A +LG  GI VN + P    T        N  DG+  +        +Q+E         
Sbjct: 194 LARDLGPRGITVNIVHPGSTDTDX------NPADGDHAE--------AQRERIAT----- 234
Query: 256 GLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
                 G+    +DIA    +LA  + ++V+G +L +DGG
Sbjct: 235 ------GSYGEPQDIAGLVAWLAGPQGKFVTGASLTIDGG 268

>pdb|2FWM|X Chain X, Crystal Structure Of E. Coli Enta, A 2,3-Dihydrodihydroxy Benzoate Dehydrogenase Length = 250

Iteration: 1
 Score = 91.3 bits (225), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 80/272 (29%), Positives = 113/272 (41%), Gaps = 26/272 (9%)
Query: 26  HRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHC 85
           H    GK   +TG  +GIG A    F   GAKV         G   A T    P      
Sbjct: 2   HMDFSGKNVWVTGAGKGIGYATALAFVEAGAKVT--------GFDQAFTQEQYPFATEVM 53
Query: 86  DVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGM 145
           DV+    +  +    ++   RLD L N AG+L    +  +      +++     VNV G 
Sbjct: 54  DVADAAQVAQVCQRLLAETERLDALVNAAGIL----RMGATDQLSKEDWQQTFAVNVGGA 109
Query: 146 ALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGI 205
               +        + GG I++ AS A     +G  AY ASK A+  L  +   EL   G+
Sbjct: 110 FNLFQQTMNQFRRQRGGAIVTVASDAAHTPRIGMSAYGASKAALKSLALSVGLELAGSGV 169
Query: 206 RVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL 265
           R N +SP    T M    W +  D  EE     FG          E+F   LG   G   
Sbjct: 170 RCNVVSPGSTDTDMQRTLWVS--DDAEEQRIRGFG----------EQF--KLGIPLGKIA 215
Query: 266 RSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
           R ++IA   L+LASD + +++  ++VVDGG T
Sbjct: 216 RPQEIANTILFLASDLASHITLQDIVVDGGST 247

>pdb|2PNF|A Chain A, Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-carrier Protein) Reductase Length = 248

Iteration: 1
 Score = 90.9 bits (224), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 72/273 (26%), Positives = 126/273 (46%), Gaps = 33/273 (12%)
Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVH-CD 86
           +L+GKV+++TG  RGIG A     A  G+ V+I          +A  +A       H  +
Sbjct: 4   KLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVE 63
Query: 87  VSL--EEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKG 144
           ++L  EE I        +    +DIL NNAG+     + K  +     +++ V++VN+ G
Sbjct: 64  MNLLSEESINKAFEEIYNLVDGIDILVNNAGI----TRDKLFLRMSLLDWEEVLKVNLTG 119
Query: 145 MALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYG 204
             L  +++ R MI +  G I++ +SV G  G +G   Y+ +K  ++G TK+ A EL    
Sbjct: 120 TFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNVGQVNYSTTKAGLIGFTKSLAKELAPRN 179
Query: 205 IRVNCISPFGVATSML-VNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGT 263
           + VN ++P  + T M  V +       +E+     FG P                     
Sbjct: 180 VLVNAVAPGFIETDMTAVLSEEIKQKYKEQIPLGRFGSP--------------------- 218
Query: 264 TLRSKDIAEAALYLASDESRYVSGHNLVVDGGV 296
               +++A   L+L S+ + Y++G  + V+GG+
Sbjct: 219 ----EEVANVVLFLCSELASYITGEVIHVNGGM 247

>pdb|1YBV|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And An Active Site Inhibitor Length = 283

Iteration: 1
 Score = 90.5 bits (223), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 78/279 (27%), Positives = 128/279 (45%), Gaps = 27/279 (9%)
Query: 24  PSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVI--ADVEDTLGSVLASTLAP-APV 80
           P    LEGKVA++TG  RGIG        R G KV++  A+  ++   V+A+     +  
Sbjct: 22  PQSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDA 81
Query: 81  TFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRV 140
             V  +V + EDI  +    V  +G+LDI+ +N+GV+        + D   +EFD V  +
Sbjct: 82  ACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVV----SFGHVKDVTPEEFDRVFTI 137
Query: 141 NVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHA-YTASKHAIVGLTKNAACE 199
           N +G     + A + +    GG +I   S+ G    +  HA Y+ SK AI    +  A +
Sbjct: 138 NTRGQFFVAREAYKHL--EIGGRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAID 195
Query: 200 LGRYGIRVNCISPFGVATSMLVNAWRN---SGDGEEEDECMNFGIPSQKEVRKMEEFVSG 256
           +    I VN ++P G+ T M     R    +G+    +E   +       +R++     G
Sbjct: 196 MADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRV-----G 250
Query: 257 LGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
           L           DIA    +LAS++  +V+G  + +DGG
Sbjct: 251 L---------PIDIARVVCFLASNDGGWVTGKVIGIDGG 280

>pdb|3NUG|A Chain A, Crystal Structure Of Wild Type Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247

Iteration: 1
 Score = 90.5 bits (223), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 80/271 (29%), Positives = 127/271 (46%), Gaps = 29/271 (10%)
Query: 27  RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCD 86
            RL GK A++TG A+GIG+A     A  GA V+++D+        A+++       +  D
Sbjct: 2   ERLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGK-KARAIAAD 60
Query: 87  VSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMA 146
           +S    ++ L     +  G +DIL NNA ++       +  D D D +  ++ VN+ G  
Sbjct: 61  ISDPGSVKALFAEIQALTGGIDILVNNASIV----PFVAWDDVDLDHWRKIIDVNLTGTF 116
Query: 147 LGIKHAARVMINRG-GGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGI 205
           +  +     M   G  G +IS AS     G     AY A+K  ++G T+  A ELG+Y I
Sbjct: 117 IVTRAGTDQMRAAGKAGRVISIASNTFFAGTPNMAAYVAAKGGVIGFTRALATELGKYNI 176
Query: 206 RVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL 265
             N ++P G+  S  V A          +E   FG            FV  L  +KG   
Sbjct: 177 TANAVTP-GLIESDGVKA-------SPHNEA--FG------------FVEMLQAMKGKG- 213
Query: 266 RSKDIAEAALYLASDESRYVSGHNLVVDGGV 296
           + + IA+   +LASD++R+++G  L VD G+
Sbjct: 214 QPEHIADVVSFLASDDARWITGQTLNVDAGM 244

>pdb|4G81|D Chain D, Crystal Structure Of A Hexonate Dehydrogenase Ortholog (Target Efi- 506402 From Salmonella Enterica, Unliganded Structure Length = 255

Iteration: 1
 Score = 89.0 bits (219), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 82/272 (30%), Positives = 126/272 (46%), Gaps = 33/272 (12%)
Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTF--VHCD 86
           L GK A++TG ARG+G A     A  GA+V++ D+  TL +    TL         V  D
Sbjct: 7   LTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFD 66
Query: 87  VSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMA 146
           V+ E  IE   +   +    +DIL NNAG+    +  K +++ + + +  V+  N+    
Sbjct: 67  VTDELAIEAAFSKLDAEGIHVDILINNAGI----QYRKPMVELELENWQKVIDTNLTSAF 122
Query: 147 LGIKHAARVMINR-GGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGI 205
           L  + AA+ MI R  GG II+  S+           YTA+K  I  LT + A E  ++ I
Sbjct: 123 LVSRSAAKRMIARNSGGKIINIGSLTSQAARPTVAPYTAAKGGIKMLTCSMAAEWAQFNI 182
Query: 206 RVNCISPFGVATSMLVNAWRNSG--DGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGT 263
           + N I P  + T M      N+   + ++ D  +    PSQ+  R  E        L GT
Sbjct: 183 QTNAIGPGYILTDM------NTALIEDKQFDSWVKSSTPSQRWGRPEE--------LIGT 228
Query: 264 TLRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
                     A++L+S  S Y++G  + VDGG
Sbjct: 229 ----------AIFLSSKASDYINGQIIYVDGG 250

>pdb|3CSD|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To Nadph And The Inhibitor Emodin Length = 281

Iteration: 1
 Score = 89.0 bits (219), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 80/269 (29%), Positives = 123/269 (45%), Gaps = 21/269 (7%)
Query: 32  KVAIITGGARGIGEAAVRLFARHGAKV-VIADVEDTLGSVLASTL-APAPVTFVHCDVSL 89
           +VA++TG   GIG    R   + G +V V A  E+ L + L     A        CDV  
Sbjct: 27  EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRS 86
Query: 90  EEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGI 149
             +IE L+ + V RYG +D+L NNAG LG      +  +   + + +V+  N+ G+    
Sbjct: 87  VPEIEALVAAVVERYGPVDVLVNNAGRLGG----GATAELADELWLDVVETNLTGVFRVT 142
Query: 150 KHAARV--MINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRV 207
           K   +   M+ RG G I++ AS  G  G +    Y+ASKH +VG TK    EL R GI V
Sbjct: 143 KQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITV 202
Query: 208 NCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRS 267
           N + P  V T M  +   +  D  E        + +++   ++   V       G  ++ 
Sbjct: 203 NAVCPGFVETPMAASVREHYSDIWE--------VSTEEAFDRITARVP-----IGRYVQP 249
Query: 268 KDIAEAALYLASDESRYVSGHNLVVDGGV 296
            ++AE   YL    +  V+   L V GG+
Sbjct: 250 SEVAEMVAYLIGPGAAAVTAQALNVCGGL 278

>pdb|2RHR|B Chain B, P94l Actinorhodin Ketordeuctase Mutant, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 88.6 bits (218), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 68/202 (33%), Positives = 98/202 (48%), Gaps = 8/202 (3%)
Query: 32  KVAIITGGARGIGEAAVRLFARHGAKV-VIADVEDTLGSVLASTL-APAPVTFVHCDVSL 89
           +VA++TG   GIG    R   + G +V V A  E+ L + L     A        CDV  
Sbjct: 23  EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRS 82
Query: 90  EEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGI 149
             +IE L+ + V RYG +D+L NNAG LG      +  +   + + +V+  N+ G+    
Sbjct: 83  VPEIEALVAAVVERYGPVDVLVNNAGRLGG----GATAELADELWLDVVETNLTGVFRVT 138
Query: 150 KHAARV--MINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRV 207
           K   +   M+ RG G I++ AS  G  G +    Y+ASKH +VG TK    EL R GI V
Sbjct: 139 KQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITV 198
Query: 208 NCISPFGVATSMLVNAWRNSGD 229
           N + P  V T M  +   +  D
Sbjct: 199 NAVCPGFVETPMAASVREHYSD 220

>pdb|1JA9|A Chain A, Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalene Reductase In Complex With Nadph And Pyroquilon Length = 274

Iteration: 1
 Score = 88.6 bits (218), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 86/286 (30%), Positives = 134/286 (46%), Gaps = 43/286 (15%)
Query: 25  SHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVI---------ADVEDTLGSVLASTL 75
           + + L GKVA+ TG  RGIG        R GA VV+          +V   L  + A  +
Sbjct: 15  ASKPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGV 74
Query: 76  APAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFD 135
           A      +  D+S   ++  L +  VS +G LD + +N+G+          ++   + FD
Sbjct: 75  A------IQADISKPSEVVALFDKAVSHFGGLDFVMSNSGM----EVWCDELEVTQELFD 124
Query: 136 NVMRVNVKGMAL----GIKHAARVMINRGGGCIISTASVAGVMGGLGPHA-YTASKHAIV 190
            V  +N +G       G+KH  R      GG II T+S+A VM G+  HA Y  SK A+ 
Sbjct: 125 KVFNLNTRGQFFVAQQGLKHCRR------GGRIILTSSIAAVMTGIPNHALYAGSKAAVE 178
Query: 191 GLTKNAACELGRYGIRVNCISPFGVATSML-VNAWRNSGDGEEEDECMNFGIPSQKEVRK 249
           G  +  A + G  G+ VNCI+P GV T M   N+W  +  G +       G+P +    K
Sbjct: 179 GFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYK-------GMPQE----K 227
Query: 250 MEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
           ++E ++ +  LK     + DI  A   L  +ES +++G  + + GG
Sbjct: 228 IDEGLANMNPLKRIGYPA-DIGRAVSALCQEESEWINGQVIKLTGG 272

>pdb|4B79|A Chain A, The Aeropath Project And Pseudomonas Aeruginosa High-throughput Crystallographic Studies For Assessment Of Potential Targets In Early Stage Drug Discovery. Length = 242

Iteration: 1
 Score = 88.2 bits (217), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 79/273 (28%), Positives = 124/273 (45%), Gaps = 41/273 (15%)
Query: 25  SHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAP--APVTF 82
            H    G+  ++TGG+ GIG A    FA  GA+VV       LG       AP    +  
Sbjct: 5   QHDIYAGQQVLVTGGSSGIGAAIAMQFAELGAEVV------ALGLDADGVHAPRHPRIRR 58
Query: 83  VHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNV 142
              D++  + ++ L  +      RLD+L NNAG+  ++       ++D   F+ V+R+N+
Sbjct: 59  EELDITDSQRLQRLFEA----LPRLDVLVNNAGISRDRE------EYDLATFERVLRLNL 108
Query: 143 KGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGR 202
               L     AR ++ + GG I++ AS+    G     AY+ASK AIV LT++ ACE   
Sbjct: 109 SAAMLA-SQLARPLLAQRGGSILNIASMYSTFGSADRPAYSASKGAIVQLTRSLACEYAA 167
Query: 203 YGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKG 262
             IRVN I+P  + T +        G G + D      I  +  + +  E          
Sbjct: 168 ERIRVNAIAPGWIDTPL--------GAGLKADVEATRRIMQRTPLARWGE---------- 209
Query: 263 TTLRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
               + ++A AA +L    + +V+G  L VDGG
Sbjct: 210 ----APEVASAAAFLCGPGASFVTGAVLAVDGG 238

>pdb|3NDR|A Chain A, Crystal Structure Of Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247

Iteration: 1
 Score = 87.8 bits (216), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 80/271 (29%), Positives = 125/271 (46%), Gaps = 31/271 (11%)
Query: 27  RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCD 86
            RL GK A++TG A+GIG+A     A  GA V+++D+        A+++       +  D
Sbjct: 2   ERLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGK-KARAIAAD 60
Query: 87  VSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMA 146
           +S    ++ L     +  G +DIL NNA ++       +  D D D +  ++ VN+ G  
Sbjct: 61  ISDPGSVKALFAEIQALTGGIDILVNNASIV----PFVAWDDVDLDHWRKIIDVNLTGTF 116
Query: 147 LGIKHAARVMINRGG--GCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYG 204
           + +  A        G  G +IS AS     G     AY A+K  ++G T+  A ELG+Y 
Sbjct: 117 I-VTRAGTDQXRAAGKAGRVISIASNTFFAGTPNXAAYVAAKGGVIGFTRALATELGKYN 175
Query: 205 IRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT 264
           I  N ++P G+  S  V A          +E   FG            FV  L   KG  
Sbjct: 176 ITANAVTP-GLIESDGVKA-------SPHNEA--FG------------FVEXLQAXKGKG 213
Query: 265 LRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
            + + IA+   +LASD++R+++G  L VD G
Sbjct: 214 -QPEHIADVVSFLASDDARWITGQTLNVDAG 243

>pdb|4DC0|A Chain A, Crystal Structure Of F189w Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 86.7 bits (213), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 79/269 (29%), Positives = 122/269 (45%), Gaps = 21/269 (7%)
Query: 32  KVAIITGGARGIGEAAVRLFARHGAKV-VIADVEDTLGSVLASTL-APAPVTFVHCDVSL 89
           +VA++TG   GIG    R   + G +V V A  E+ L + L     A        CDV  
Sbjct: 27  EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRS 86
Query: 90  EEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGI 149
             +IE L+ + V RYG +D+L NNAG  G      +  +   + + +V+  N+ G+    
Sbjct: 87  VPEIEALVAAVVERYGPVDVLVNNAGRPGG----GATAELADELWLDVVETNLTGVFRVT 142
Query: 150 KHAARV--MINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRV 207
           K   +   M+ RG G I++ AS  G  G +    Y+ASKH +VG TK    EL R GI V
Sbjct: 143 KQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITV 202
Query: 208 NCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRS 267
           N + P  V T M  +   +  D  E        + +++   ++   V       G  ++ 
Sbjct: 203 NAVCPGWVETPMAASVREHYSDIWE--------VSTEEAFDRITARVP-----IGRYVQP 249
Query: 268 KDIAEAALYLASDESRYVSGHNLVVDGGV 296
            ++AE   YL    +  V+   L V GG+
Sbjct: 250 SEVAEMVAYLIGPGAAAVTAQALNVCGGL 278

>pdb|3A28|C Chain C, Crystal Structure Of L-2,3-Butanediol Dehydrogenase Length = 258

Iteration: 1
 Score = 86.7 bits (213), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 82/270 (30%), Positives = 132/270 (48%), Gaps = 22/270 (8%)
Query: 32  KVAIITGGARGIGEAAVRLFARHGAKVVIADV----EDTLGSVLASTLAPAPVTFVHCDV 87
           KVA++TGGA+GIG       A  G  + +AD+    E    ++     A     FV  DV
Sbjct: 3   KVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDV 62
Query: 88  SLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMAL 147
           + + + ++ I+    + G  D+L NNAG+     + K +++   ++   +  VNV  +  
Sbjct: 63  TDKANFDSAIDEAAEKLGGFDVLVNNAGI----AQIKPLLEVTEEDLKQIYSVNVFSVFF 118
Query: 148 GIKHAARVMINRG-GGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIR 206
           GI+ A+R     G  G II+ AS+A + G     AY+ +K A+ GLT+ AA EL   G  
Sbjct: 119 GIQAASRKFDELGVKGKIINAASIAAIQGFPILSAYSTTKFAVRGLTQAAAQELAPKGHT 178
Query: 207 VNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLR 266
           VN  +P  V T M    W      E+ D  ++  I  +      +E+ S +    G    
Sbjct: 179 VNAYAPGIVGTGM----W------EQIDAELS-KINGKPIGENFKEYSSSIA--LGRPSV 225
Query: 267 SKDIAEAALYLASDESRYVSGHNLVVDGGV 296
            +D+A    +LAS+ S YV+G  ++VDGG+
Sbjct: 226 PEDVAGLVSFLASENSNYVTGQVMLVDGGM 255

>pdb|2RH4|A Chain A, Actinorhodin Ketoreductase, Actkr, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 86.3 bits (212), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 67/202 (33%), Positives = 97/202 (48%), Gaps = 8/202 (3%)
Query: 32  KVAIITGGARGIGEAAVRLFARHGAKV-VIADVEDTLGSVLASTL-APAPVTFVHCDVSL 89
           +VA++TG   GIG    R   + G +V V A  E+ L + L     A        CDV  
Sbjct: 23  EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRS 82
Query: 90  EEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGI 149
             +IE L+ + V RYG +D+L NNAG  G      +  +   + + +V+  N+ G+    
Sbjct: 83  VPEIEALVAAVVERYGPVDVLVNNAGRPGG----GATAELADELWLDVVETNLTGVFRVT 138
Query: 150 KHAARV--MINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRV 207
           K   +   M+ RG G I++ AS  G  G +    Y+ASKH +VG TK    EL R GI V
Sbjct: 139 KQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITV 198
Query: 208 NCISPFGVATSMLVNAWRNSGD 229
           N + P  V T M  +   +  D
Sbjct: 199 NAVCPGFVETPMAASVREHYSD 220

>pdb|1W4Z|A Chain A, Structure Of Actinorhodin Polyketide (Actiii) Reductase Length = 281

Iteration: 1
 Score = 86.3 bits (212), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 79/269 (29%), Positives = 122/269 (45%), Gaps = 21/269 (7%)
Query: 32  KVAIITGGARGIGEAAVRLFARHGAKV-VIADVEDTLGSVLASTL-APAPVTFVHCDVSL 89
           +VA++TG   GIG    R   + G +V V A  E+ L + L     A        CDV  
Sbjct: 27  EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRS 86
Query: 90  EEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGI 149
             +IE L+ + V RYG +D+L NNAG  G      +  +   + + +V+  N+ G+    
Sbjct: 87  VPEIEALVAAVVERYGPVDVLVNNAGRPGG----GATAELADELWLDVVETNLTGVFRVT 142
Query: 150 KHAARV--MINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRV 207
           K   +   M+ RG G I++ AS  G  G +    Y+ASKH +VG TK    EL R GI V
Sbjct: 143 KQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITV 202
Query: 208 NCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRS 267
           N + P  V T M  +   +  D  E        + +++   ++   V       G  ++ 
Sbjct: 203 NAVCPGFVETPMAASVREHYSDIWE--------VSTEEAFDRITARVP-----IGRYVQP 249
Query: 268 KDIAEAALYLASDESRYVSGHNLVVDGGV 296
            ++AE   YL    +  V+   L V GG+
Sbjct: 250 SEVAEMVAYLIGPGAAAVTAQALNVCGGL 278

>pdb|4DC1|A Chain A, Crystal Structure Of Y202f Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 86.3 bits (212), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 66/192 (34%), Positives = 94/192 (48%), Gaps = 8/192 (4%)
Query: 32  KVAIITGGARGIGEAAVRLFARHGAKV-VIADVEDTLGSVLASTL-APAPVTFVHCDVSL 89
           +VA++TG   GIG    R   + G +V V A  E+ L + L     A        CDV  
Sbjct: 27  EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRS 86
Query: 90  EEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGI 149
             +IE L+ + V RYG +D+L NNAG  G      +  +   + + +V+  N+ G+    
Sbjct: 87  VPEIEALVAAVVERYGPVDVLVNNAGRPGG----GATAELADELWLDVVETNLTGVFRVT 142
Query: 150 KHAARV--MINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRV 207
           K   +   M+ RG G I++ AS  G  G +    Y+ASKH +VG TK    EL R GI V
Sbjct: 143 KQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITV 202
Query: 208 NCISPFGVATSM 219
           N + P  V T M
Sbjct: 203 NAVCPGFVETPM 214

>pdb|2EHD|A Chain A, Crystal Structure Analysis Of Oxidoreductase Length = 234

Iteration: 1
 Score = 86.3 bits (212), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 69/222 (31%), Positives = 103/222 (46%), Gaps = 12/222 (5%)
Query: 35  IITGGARGIGEAAVRLFARHGAKV-VIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDI 93
           +ITG +RGIGEA  RL    G +V ++A  E  L ++ A      P+     DV  E D 
Sbjct: 9   LITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEGALPLP---GDVREEGDW 65
Query: 94  ENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAA 153
              + +    +G L  L NNAGV       K + +   +E+  V+  N+ G  LGI+HA 
Sbjct: 66  ARAVAAMEEAFGELSALVNNAGV----GVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAV 121
Query: 154 RVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPF 213
             ++ RGGG I++  S+AG     G  AY ASK  ++GL   A  +L    +RV  + P 
Sbjct: 122 PALLRRGGGTIVNVGSLAGKNPFKGGAAYNASKFGLLGLAGAAMLDLREANVRVVNVLPG 181
Query: 214 GVATSMLVN----AWRNSGDGEEEDECMNFGIPSQKEVRKME 251
            V T    N    AW+   +   +       +P    V ++E
Sbjct: 182 SVDTGFAGNTPGQAWKLKPEDVAQAVLFALEMPGHAMVSEIE 223

>pdb|1X7G|A Chain A, Actinorhodin Polyketide Ketoreductase, Act Kr, With Nadp Bound Length = 261

Iteration: 1
 Score = 86.3 bits (212), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 67/202 (33%), Positives = 97/202 (48%), Gaps = 8/202 (3%)
Query: 32  KVAIITGGARGIGEAAVRLFARHGAKV-VIADVEDTLGSVLASTL-APAPVTFVHCDVSL 89
           +VA++TG   GIG    R   + G +V V A  E+ L + L     A        CDV  
Sbjct: 7   EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRS 66
Query: 90  EEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGI 149
             +IE L+ + V RYG +D+L NNAG  G      +  +   + + +V+  N+ G+    
Sbjct: 67  VPEIEALVAAVVERYGPVDVLVNNAGRPGG----GATAELADELWLDVVETNLTGVFRVT 122
Query: 150 KHAARV--MINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRV 207
           K   +   M+ RG G I++ AS  G  G +    Y+ASKH +VG TK    EL R GI V
Sbjct: 123 KQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITV 182
Query: 208 NCISPFGVATSMLVNAWRNSGD 229
           N + P  V T M  +   +  D
Sbjct: 183 NAVCPGFVETPMAASVREHYSD 204

>pdb|4DBZ|A Chain A, Crystal Structure Of V151l Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 86.3 bits (212), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 79/269 (29%), Positives = 122/269 (45%), Gaps = 21/269 (7%)
Query: 32  KVAIITGGARGIGEAAVRLFARHGAKV-VIADVEDTLGSVLASTL-APAPVTFVHCDVSL 89
           +VA++TG   GIG    R   + G +V V A  E+ L + L     A        CDV  
Sbjct: 27  EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRS 86
Query: 90  EEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGI 149
             +IE L+ + V RYG +D+L NNAG  G      +  +   + + +V+  N+ G+    
Sbjct: 87  VPEIEALVAAVVERYGPVDVLVNNAGRPGG----GATAELADELWLDVVETNLTGVFRVT 142
Query: 150 KHAARV--MINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRV 207
           K   +   M+ RG G I++ AS  G  G +    Y+ASKH +VG TK    EL R GI V
Sbjct: 143 KQVLKAGGMLERGTGRIVNIASTGGKQGLVHAAPYSASKHGVVGFTKALGLELARTGITV 202
Query: 208 NCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRS 267
           N + P  V T M  +   +  D  E        + +++   ++   V       G  ++ 
Sbjct: 203 NAVCPGFVETPMAASVREHYSDIWE--------VSTEEAFDRITARVP-----IGRYVQP 249
Query: 268 KDIAEAALYLASDESRYVSGHNLVVDGGV 296
            ++AE   YL    +  V+   L V GG+
Sbjct: 250 SEVAEMVAYLIGPGAAAVTAQALNVCGGL 278

>pdb|4HP8|A Chain A, Crystal Structure Of A Putative 2-Deoxy-D-Gluconate 3-Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506435) With Bound Nadp Length = 247

Iteration: 1
 Score = 85.9 bits (211), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 83/270 (30%), Positives = 127/270 (47%), Gaps = 36/270 (13%)
Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIA--DVEDTLGSVLASTLAPAPVTFVHCD 86
           LEG+ A++TG   G+G+A     A  GA+VV A     D    ++A     A    +   
Sbjct: 7   LEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIAKDGGNASALLIDFA 66
Query: 87  VSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMA 146
             L          + +  G  DIL NNAG++   R+  S+ +F   ++D VM VN+K + 
Sbjct: 67  DPLAA------KDSFTDAG-FDILVNNAGII---RRADSV-EFSELDWDEVMDVNLKALF 115
Query: 147 LGIKHAARVMINRG-GGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGI 205
              +  A+ ++ +G  G +++ AS+    GG+   +YTA+KH + GLTK  A E    GI
Sbjct: 116 FTTQAFAKELLAKGRSGKVVNIASLLSFQGGIRVPSYTAAKHGVAGLTKLLANEWAAKGI 175
Query: 206 RVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL 265
            VN I+P  + T        N+ +    D   N  I        +E   +G         
Sbjct: 176 NVNAIAPGYIET--------NNTEALRADAARNKAI--------LERIPAGRWG------ 213
Query: 266 RSKDIAEAALYLASDESRYVSGHNLVVDGG 295
            S+DIA AA++L+S  + YV G  L VDGG
Sbjct: 214 HSEDIAGAAVFLSSAAADYVHGAILNVDGG 243

>pdb|2CF2|E Chain E, Architecture Of Mammalian Fatty Acid Synthase Length = 226

Iteration: 1
 Score = 85.9 bits (211), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 73/268 (27%), Positives = 126/268 (47%), Gaps = 44/268 (16%)
Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVS 88
            EGK+A++TG +RGIG A     A  GAKV+     +     ++  L  A    +  +V+
Sbjct: 3   FEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLG-ANGKGLMLNVT 61
Query: 89  LEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALG 148
               IE+++    + +G +DIL NNAG+     +   ++    +E+++++  N+  +   
Sbjct: 62  DPASIESVLEKIRAEFGEVDILVNNAGIT----RDNLLMRMKDEEWNDIIETNLSSVFRL 117
Query: 149 IKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVN 208
            K   R M+ +  G II+           G   Y A+K  ++G +K+ A E+   GI VN
Sbjct: 118 SKAVMRAMMKKRHGRIITIG---------GQANYAAAKAGLIGFSKSLAREVASRGITVN 168
Query: 209 CISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSK 268
            ++P  + TS              +D+    GI +Q             G L G    ++
Sbjct: 169 VVAPGFIETS--------------DDQ--RAGILAQVPA----------GRLGG----AQ 198
Query: 269 DIAEAALYLASDESRYVSGHNLVVDGGV 296
           +IA A  +LASDE+ Y++G  L V+GG+
Sbjct: 199 EIANAVAFLASDEAAYITGETLHVNGGM 226

>pdb|4AFN|A Chain A, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein) Reductase (fabg) From Pseudomonas Aeruginosa At 2.3a Resolution Length = 269

Iteration: 1
 Score = 85.9 bits (211), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 80/273 (29%), Positives = 124/273 (45%), Gaps = 30/273 (10%)
Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPV--TFVHCD 86
           L+GKVA++TG +RGIG+A      R GA V+      +    +A TL    V    +  D
Sbjct: 25  LQGKVALVTGASRGIGQAIALELGRLGAVVIGTATSASGAEKIAETLKANGVEGAGLVLD 84
Query: 87  VSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMA 146
           VS +E +   +       G+  I+ NNAG+     +   ++    DE+ +V+  N+  + 
Sbjct: 85  VSSDESVAATLEHIQQHLGQPLIVVNNAGI----TRDNLLVRMKDDEWFDVVNTNLNSLY 140
Query: 147 LGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIR 206
              K   R M     G II+  SV G MG  G   Y A+K  + G T+  A E+G   I 
Sbjct: 141 RLSKAVLRGMTKARWGRIINIGSVVGAMGNAGQTNYAAAKAGLEGFTRALAREVGSRAIT 200
Query: 207 VNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLR 266
           VN ++P  + T M           E + E +   IP              LG L     +
Sbjct: 201 VNAVAPGFIDTDMTREL------PEAQREALLGQIP--------------LGRLG----Q 236
Query: 267 SKDIAEAALYLASDESRYVSGHNLVVDGGVTTS 299
           +++IA+   +LASD + YV+G  + V+GG+  S
Sbjct: 237 AEEIAKVVGFLASDGAAYVTGATVPVNGGMYMS 269

>pdb|3V8B|A Chain A, Crystal Structure Of A 3-Ketoacyl-Acp Reductase From Sinorhizobium Meliloti 1021 Length = 283

Iteration: 1
 Score = 84.7 bits (208), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 76/270 (28%), Positives = 117/270 (43%), Gaps = 28/270 (10%)
Query: 33  VAIITGGARGIGEAAVRLFARHGAKV-----VIADVEDTLGSVLASTLAPAPVTFVHCDV 87
           VA+ITG   GIG A     A  G  V        +VE+    ++    A      +  DV
Sbjct: 30  VALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVG---AGGQAIALEADV 86
Query: 88  SLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMAL 147
           S E    N +   V ++G LDI+  NAG+ G       I D    E+D  + VN++G  L
Sbjct: 87  SDELQXRNAVRDLVLKFGHLDIVVANAGING---VWAPIDDLKPFEWDETIAVNLRGTFL 143
Query: 148 GIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAI--VGLTKNAACELGRYGI 205
            +      +  RGGG I+  +S+ G      P A   +      V + +  A ELG++ I
Sbjct: 144 TLHLTVPYLKQRGGGAIVVVSSINGTRTFTTPGATAYTATKAAQVAIVQQLALELGKHHI 203
Query: 206 RVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL 265
           RVN + P  + T    N   N+    EE+  +    P  +           +    G   
Sbjct: 204 RVNAVCPGAIET----NISDNTKLRHEEETAIPVEWPKGQ-----------VPITDGQPG 248
Query: 266 RSKDIAEAALYLASDESRYVSGHNLVVDGG 295
           RS+D+AE   +L S+ +R+V+G  + +DGG
Sbjct: 249 RSEDVAELIRFLVSERARHVTGSPVWIDGG 278

>pdb|3LYL|A Chain A, Structure Of 3-Oxoacyl-Acylcarrier Protein Reductase, Fabg From Francisella Tularensis Length = 247

Iteration: 1
 Score = 84.7 bits (208), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 77/272 (28%), Positives = 113/272 (41%), Gaps = 36/272 (13%)
Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVV-----IADVEDTLGSVLASTLAPAPVTFV 83
           L  KVA++TG +RGIG       A  GA VV      A  E    S          +   
Sbjct: 3   LNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSXKEKGFKARGLVLN 62
Query: 84  HCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVK 143
             D+   E I+N      +    +DIL NNAG+  +    +       DE+ +V+  N+ 
Sbjct: 63  ISDI---ESIQNFFAEIKAENLAIDILVNNAGITRDNLXXRX----SEDEWQSVINTNLS 115
Query: 144 GMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRY 203
            +    K   R    +  G IIS  SV G  G  G   Y A+K  ++G +K+ A E+   
Sbjct: 116 SIFRXSKECVRGXXKKRWGRIISIGSVVGSAGNPGQTNYCAAKAGVIGFSKSLAYEVASR 175
Query: 204 GIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGT 263
            I VN ++P  +AT             +E+   +   IPS                  G 
Sbjct: 176 NITVNVVAPGFIATDX------TDKLTDEQKSFIATKIPS------------------GQ 211
Query: 264 TLRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
               KDIA A  +LAS+E++Y++G  L V+GG
Sbjct: 212 IGEPKDIAAAVAFLASEEAKYITGQTLHVNGG 243

>pdb|2PH3|A Chain A, Crystal Structure Of 3-oxoacyl-[acyl Carrier Protein] Reductase Ttha0415 From Thermus Thermophilus Length = 245

Iteration: 1
 Score = 84.3 bits (207), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 72/268 (26%), Positives = 119/268 (44%), Gaps = 32/268 (11%)
Query: 34  AIITGGARGIGEAAVRLFARHGAKVVI---ADVEDTLGSVLASTLAPAPVTFVHCDVSLE 90
           A+ITG +RGIG A     A  G  + I    + E        +    +P+  V     LE
Sbjct: 4   ALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLE 63
Query: 91  -EDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGI 149
            E    L++      G LD L NNAG+     +   ++    ++++ V+  N+  +    
Sbjct: 64  AEAATALVHQAAEVLGGLDTLVNNAGI----TRDTLLVRMKDEDWEAVLEANLSAVFRTT 119
Query: 150 KHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNC 209
           + A ++M+    G I++  SV G++G  G   Y ASK  ++G T+  A E  + GI VN 
Sbjct: 120 REAVKLMMKARFGRIVNITSVVGILGNPGQANYVASKAGLIGFTRAVAKEYAQRGITVNA 179
Query: 210 ISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSKD 269
           ++P  + T M           +E  E     IP+                  G   R ++
Sbjct: 180 VAPGFIETEM------TERLPQEVKEAYLKQIPA------------------GRFGRPEE 215
Query: 270 IAEAALYLASDESRYVSGHNLVVDGGVT 297
           +AEA  +L S+++ Y++G  L VDGG+T
Sbjct: 216 VAEAVAFLVSEKAGYITGQTLCVDGGLT 243

>pdb|1YXM|A Chain A, Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa Reductase Length = 303

Iteration: 1
 Score = 84.3 bits (207), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 77/275 (28%), Positives = 128/275 (46%), Gaps = 34/275 (12%)
Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVE-DTLGSV---LASTLAP---APVT 81
           L+G+VAI+TGGA GIG+A V+     G+ VVIA  + + L S    L + L P   A V 
Sbjct: 16  LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVI 75
Query: 82  FVHCDVSLEEDIENLINSTVSRYGRLDILYNN-AGVLGNQRKHKSIIDFDADEFDNVMRV 140
            + C++  EE++ NL+ ST+  +G+++ L NN  G   +  +H S   + A     V+  
Sbjct: 76  PIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHA-----VLET 130
Query: 141 NVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACEL 200
           N+ G     K      +   GG I++          L  H+  A++  +  LTK+ A E 
Sbjct: 131 NLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAGFPLAVHS-GAARAGVYNLTKSLALEW 189
Query: 201 GRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNL 260
              GIR+NC++P  + +   V  + + G    E       IP+ K +   EE        
Sbjct: 190 ACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQK--IPA-KRIGVPEE-------- 238
Query: 261 KGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
                    ++    +L S  + +++G ++ VDGG
Sbjct: 239 ---------VSSVVCFLLSPAASFITGQSVDVDGG 264

>pdb|4E3Z|A Chain A, Crystal Structure Of A Oxidoreductase From Rhizobium Etli Cfn 42 Length = 272

Iteration: 1
 Score = 84.0 bits (206), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 81/270 (30%), Positives = 121/270 (44%), Gaps = 33/270 (12%)
Query: 33  VAIITGGARGIGEAAVRLFARHGAKVVI---ADVEDTLGSVLASTLAPAPVTFVHCDVSL 89
           V ++TGG+RGIG A  RL AR G +V +   A+ E     V A T +      +  DV  
Sbjct: 28  VVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGN 87
Query: 90  EEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGI 149
             DI    ++   ++GRLD L NNAG++   ++   + +   +  +  +RVNV G  L  
Sbjct: 88  AADIAAXFSAVDRQFGRLDGLVNNAGIVDYPQR---VDEXSVERIERXLRVNVTGSILCA 144
Query: 150 KHAAR---VMINRGGGCIISTASVAGVMGGLGPHA-YTASKHAIVGLTKNAACELGRYGI 205
             A R    + +  GG I++ +S A ++G    +  Y ASK AI   T   A E+   GI
Sbjct: 145 AEAVRRXSRLYSGQGGAIVNVSSXAAILGSATQYVDYAASKAAIDTFTIGLAREVAAEGI 204
Query: 206 RVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL 265
           RVN + P  + T +       SG   +        +P Q+     E              
Sbjct: 205 RVNAVRPGIIETDL-----HASGGLPDRAREXAPSVPXQRAGXPEE-------------- 245
Query: 266 RSKDIAEAALYLASDESRYVSGHNLVVDGG 295
               +A+A LYL S  + YV+G  L V GG
Sbjct: 246 ----VADAILYLLSPSASYVTGSILNVSGG 271

>pdb|3RKR|A Chain A, Crystal Structure Of A Metagenomic Short-Chain Oxidoreductase (Sdr) In Complex With Nadp Length = 262

Iteration: 1
 Score = 84.0 bits (206), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 71/205 (34%), Positives = 103/205 (50%), Gaps = 11/205 (5%)
Query: 20  DDAPPSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIA--DVEDTLGSVLASTLAP 77
           DD       L G+VA++TG +RGIG A  R     GA+VV+   DVE  L +V    +A 
Sbjct: 18  DDDDKHMSSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVE-KLRAVEREIVAA 76
Query: 78  APVTFVH-CDVSLEEDIENLINSTVSRYGRLDILYNNAGV--LGNQRKHKSIIDFDADEF 134
                 H CD+S  + I       ++ +GR D+L NNAGV   G       +      E+
Sbjct: 77  GGEAESHACDLSHSDAIAAFATGVLAAHGRCDVLVNNAGVGWFGG-----PLHTMKPAEW 131
Query: 135 DNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTK 194
           D ++ VN+K   L ++  A  MI    G II+ +S+AG        AYTASK  + GL  
Sbjct: 132 DALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNPVADGAAYTASKWGLNGLMT 191
Query: 195 NAACELGRYGIRVNCISPFGVATSM 219
           +AA EL ++ +RV+ ++P  V T  
Sbjct: 192 SAAEELRQHQVRVSLVAPGSVRTEF 216

>pdb|3I4F|A Chain A, Structure Of Putative 3-oxoacyl-reductase From Bacillus Thuringiensis Length = 264

Iteration: 1
 Score = 83.2 bits (204), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 72/270 (26%), Positives = 123/270 (45%), Gaps = 35/270 (12%)
Query: 34  AIITGGARGIGEAAVRLFARHGAKVVIADVEDTLG-SVLASTLAPAP--VTFVHCDVSLE 90
           A+IT G +G+G+         G  V +    DT     +  T       + FV  DV+ +
Sbjct: 10  ALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKK 69
Query: 91  EDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIK 150
           ED+  ++   +S +G++D L NNAG    +R  K ++D++ DE++ +++ N+  +   +K
Sbjct: 70  EDLHKIVEEAMSHFGKIDFLINNAGPYVFER--KKLVDYEEDEWNEMIQGNLTAVFHLLK 127
Query: 151 HAARVMINRGGGCIIST--ASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVN 208
               VM  +  G II+          G +   A+ A+K  +V LTK  A E   YGI  N
Sbjct: 128 LVVPVMRKQNFGRIINYGFQGADSAPGWIYRSAFAAAKVGLVSLTKTVAYEEAEYGITAN 187
Query: 209 CISPFGVATSMLVNAWRNSGD--GEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLR 266
            + P               GD  GE ++  +       +E R+++E  + +G   GT   
Sbjct: 188 MVCP---------------GDIIGEMKEATI-------QEARQLKEHNTPIGR-SGT--- 221
Query: 267 SKDIAEAALYLASDESRYVSGHNLVVDGGV 296
            +DIA    +L  D+S  ++G  + V G V
Sbjct: 222 GEDIARTISFLCEDDSDMITGTIIEVTGAV 251

>pdb|3IOY|A Chain A, Structure Of Putative Short-Chain Dehydrogenase (Saro_0793) From Novosphingobium Aromaticivorans Length = 319

Iteration: 1
 Score = 83.2 bits (204), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/198 (30%), Positives = 99/198 (50%), Gaps = 14/198 (7%)
Query: 25  SHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADV-EDTLGSVLASTLAPAP---V 80
           S +   G+ A +TGGA G+G   VR     G KV IAD+ +D++   LA+  A      V
Sbjct: 2   SLKDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEV 61
Query: 81  TFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRV 140
             V  DV+  E  +   +   +R+G + IL NNAGV       + I +   D++D ++ V
Sbjct: 62  MGVQLDVASREGFKMAADEVEARFGPVSILCNNAGV----NLFQPIEESSYDDWDWLLGV 117
Query: 141 NVKGMALGIKHAARVMINR------GGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTK 194
           N+ G+  G+      M+ R       GG +++TAS+A  +    P  Y  +K A+ GL++
Sbjct: 118 NLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGSPGIYNTTKFAVRGLSE 177
Query: 195 NAACELGRYGIRVNCISP 212
           +    L +Y I V+ + P
Sbjct: 178 SLHYSLLKYEIGVSVLCP 195

>pdb|1BDB|A Chain A, Cis-Biphenyl-2,3-Dihydrodiol-2,3-Dehydrogenase From Pseudomonas Sp. Lb400 Length = 277

Iteration: 1
 Score = 83.2 bits (204), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 63/196 (32%), Positives = 97/196 (49%), Gaps = 10/196 (5%)
Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDV 87
           +L+G+  +ITGGA G+G A V  F   GAKV + D      + L +      +  V  DV
Sbjct: 2   KLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIV-GDV 60
Query: 88  SLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADE----FDNVMRVNVK 143
              ED +   +  V+R+G++D L  NAG+        +++D   +     FD V  +NVK
Sbjct: 61  RSLEDQKQAASRCVARFGKIDTLIPNAGI---WDYSTALVDLPEESLDAAFDEVFHINVK 117
Query: 144 GMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRY 203
           G    +K     ++   G  I + ++      G GP  YTA+KHAIVGL +  A EL  Y
Sbjct: 118 GYIHAVKACLPALVASRGNVIFTISNAGFYPNGGGP-LYTAAKHAIVGLVRELAFELAPY 176
Query: 204 GIRVNCISPFGVATSM 219
            +RVN +   G+ + +
Sbjct: 177 -VRVNGVGSGGINSDL 191

>pdb|3OML|A Chain A, Structure Of Full-Length Peroxisomal Multifunctional Enzyme Type 2 From Drosophila Melanogaster Length = 613

Iteration: 1
 Score = 83.2 bits (204), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 62/201 (30%), Positives = 96/201 (47%), Gaps = 28/201 (13%)
Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDV 87
           R +G+VA++TG   G+G     LFA  GAKVV+ D+  T     AS  A         D+
Sbjct: 16  RYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRA--------ADI 67
Query: 88  SLEE----------------DIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDA 131
            ++E                D   +I + +  +GR+DIL NNAG+L    + +S++    
Sbjct: 68  VVDEIRKAGGEAVADYNSVIDGAKVIETAIKAFGRVDILVNNAGIL----RDRSLVKTSE 123
Query: 132 DEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVG 191
            +++ V  V++KG     + A   M  +  G II T+S +G+ G  G   YTA+K  ++G
Sbjct: 124 QDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGNFGQVNYTAAKMGLIG 183
Query: 192 LTKNAACELGRYGIRVNCISP 212
           L    A E  R  +  N I P
Sbjct: 184 LANTVAIEGARNNVLCNVIVP 204

>pdb|3UF0|A Chain A, Crystal Structure Of A Putative Nad(P) Dependent Gluconate 5- Dehydrogenase From Beutenbergia Cavernae(Efi Target Efi-502044) With Bound Nadp (Low Occupancy) Length = 273

Iteration: 1
 Score = 82.8 bits (203), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 81/273 (29%), Positives = 120/273 (43%), Gaps = 30/273 (10%)
Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPA--PVTFVHCD 86
           L G+ A++TG   GIG A    +AR GA V+     D +  V A  +A        V  D
Sbjct: 29  LAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVKEV-ADEIADGGGSAEAVVAD 87
Query: 87  VSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMA 146
           ++  E   N+     +   R+D+L NNAG++      +  +      +  V+ VN+    
Sbjct: 88  LADLEGAANVAEELAATR-RVDVLVNNAGIIARAPAEEVSLG----RWREVLTVNLDAAW 142
Query: 147 LGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIR 206
           +  +     M+  G G I++ AS+    GG    AY ASKHA+VGLT+  A E    G+ 
Sbjct: 143 VLSRSFGTAMLAHGSGRIVTIASMLSFQGGRNVAAYAASKHAVVGLTRALASEWAGRGVG 202
Query: 207 VNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLR 266
           VN ++P  V T+   N      D E   E +   IP+                  G    
Sbjct: 203 VNALAPGYVVTA---NTAALRADDERAAE-ITARIPA------------------GRWAT 240
Query: 267 SKDIAEAALYLASDESRYVSGHNLVVDGGVTTS 299
            +D+   A++LASD + YV G  L VDGG   S
Sbjct: 241 PEDMVGPAVFLASDAASYVHGQVLAVDGGWLAS 273

>pdb|2Y93|A Chain A, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3- Dehydrogenase (Bphb)from Pandoraea Pnomenusa Strain B-356. Length = 281

Iteration: 1
 Score = 82.4 bits (202), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 62/196 (31%), Positives = 98/196 (50%), Gaps = 10/196 (5%)
Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDV 87
           +L G+VA+ITGGA G+G A V  F   GA+V + D        L        V  V  DV
Sbjct: 2   KLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGNAVGVV-GDV 60
Query: 88  SLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADE----FDNVMRVNVK 143
              +D +      ++ +G++D L  NAG+        ++ D   D+    FD++  VNVK
Sbjct: 61  RSLQDQKRAAERCLAAFGKIDTLIPNAGI---WDYSTALADLPEDKIDAAFDDIFHVNVK 117
Query: 144 GMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRY 203
           G    +K     +++  G  + + ++      G GP  YTA+KHA+VGL +  A EL  +
Sbjct: 118 GYIHAVKACLPALVSSRGSVVFTISNAGFYPNGGGP-LYTATKHAVVGLVRQMAFELAPH 176
Query: 204 GIRVNCISPFGVATSM 219
            +RVN ++P G+ T +
Sbjct: 177 -VRVNGVAPGGMNTDL 191

>pdb|1X1E|A Chain A, Crystal Structure Of Tt0495 Protein From Thermus Thermophilus Hb8 Length = 239

Iteration: 1
 Score = 82.0 bits (201), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 80/272 (29%), Positives = 121/272 (44%), Gaps = 47/272 (17%)
Query: 32  KVAIITGGARGIGEAAVRLFARHGAKVVIA-----DVEDTLGSVLASTLAPAPVTFVHCD 86
           + A++TGG+RGIG A        G +V IA     +   +LG+V      P P      D
Sbjct: 3   RKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEAAQSLGAV------PLP-----TD 51
Query: 87  VSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMA 146
           +  ++D + L+   +   G L +L + A V  N RK    ++   +E+  V+ +++    
Sbjct: 52  LE-KDDPKGLVKRALEALGGLHVLVHAAAV--NVRK--PALELSYEEWRRVLYLHLDVAF 106
Query: 147 LGIKHAARVMINRGGGCIISTASVAGVMGGLGP---HAYTASKHAIVGLTKNAACELGRY 203
           L  + AA  M   G G ++   SV     G GP    AYT +K A++GLT+  A E  R 
Sbjct: 107 LLAQAAAPHMAEAGWGRVLFIGSVTTFTAG-GPVPIPAYTTAKTALLGLTRALAKEWARL 165
Query: 204 GIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGT 263
           GIRVN + P  V T   +   +N     E  E +   IP                   G 
Sbjct: 166 GIRVNLLCPGYVETEFTLPLRQNP----ELYEPITARIP------------------MGR 203
Query: 264 TLRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
             R ++IA  A  L  DE+ Y++G  + VDGG
Sbjct: 204 WARPEEIARVAAVLCGDEAEYLTGQAVAVDGG 235

>pdb|4EGF|A Chain A, Crystal Structure Of A L-Xylulose Reductase From Mycobacterium Smegmatis Length = 266

Iteration: 1
 Score = 82.0 bits (201), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 90/279 (32%), Positives = 130/279 (46%), Gaps = 40/279 (14%)
Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIA--DVED------TLGSVLASTLAPAP 79
           RL+GK A+ITG  +GIG    R FA  GA++V++  DV +       LG    +      
Sbjct: 17  RLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTD----- 71
Query: 80  VTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMR 139
           V  V  D++  +    L       +G LD+L NNAG+   Q     ++D D   FD  + 
Sbjct: 72  VHTVAIDLAEPDAPAELARRAAEAFGGLDVLVNNAGISHPQ----PVVDTDPQLFDATIA 127
Query: 140 VNVKGMALGIKHAARVMINRG-GGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAAC 198
           VN++  AL      + M+  G GG II+ AS A +      +AY  SK  +V  TK  A 
Sbjct: 128 VNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPLPDHYAYCTSKAGLVMATKVLAR 187
Query: 199 ELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLG 258
           ELG +GIR N + P  V T M    W   GD E +   M   IP              LG
Sbjct: 188 ELGPHGIRANSVCPTVVLTEMGQRVW---GD-EAKSAPMIARIP--------------LG 229
Query: 259 NLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
                     ++++A ++LASD +  ++G ++ VDGG T
Sbjct: 230 RFA----VPHEVSDAVVWLASDAASMINGVDIPVDGGYT 264

>pdb|1ZBQ|A Chain A, Crystal Structure Of Human 17-beta-hydroxysteroid Dehydrogenase Type 4 In Complex With Nad Length = 327

Iteration: 1
 Score = 81.6 bits (200), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 58/194 (29%), Positives = 97/194 (50%), Gaps = 14/194 (7%)
Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVT------ 81
           R +G+V ++TG   G+G A    FA  GA VV+ D+      V   +LA   V       
Sbjct: 27  RFDGRVVLVTGAGAGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSLAADKVVEEIRRR 86
Query: 82  ---FVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVM 138
               V    S+EE  E ++ + +  +GR+D++ NNAG+L    + +S      +++D + 
Sbjct: 87  GGKAVANYDSVEEG-EKVVKTALDAFGRIDVVVNNAGIL----RDRSFARISDEDWDIIH 141
Query: 139 RVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAAC 198
           RV+++G     + A   M  +  G II T+S +G+ G  G   Y+A+K  ++GL  + A 
Sbjct: 142 RVHLRGSFQVTRAAWEHMKKQKYGRIIMTSSASGIYGNFGQANYSAAKLGLLGLANSLAI 201
Query: 199 ELGRYGIRVNCISP 212
           E  +  I  N I+P
Sbjct: 202 EGRKSNIHCNTIAP 215

>pdb|3IS3|A Chain A, Crystal Structure Of 17beta-Hydroxysteroid Dehydrogenase (Apo Form) From Fungus Cochliobolus Lunatus Length = 270

Iteration: 1
 Score = 81.6 bits (200), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 78/280 (27%), Positives = 123/280 (43%), Gaps = 38/280 (13%)
Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVI------ADVEDTLGSVLASTLAPAPVT 81
           RL+GKVA++TG  RGIG A      R GAKVV+       D E  +  + A  L    + 
Sbjct: 15  RLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKA--LGSDAIA 72
Query: 82  FVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVN 141
            +  D+    +I  L +  V+ +G LDI  +N+GV+        + D   +EFD V  +N
Sbjct: 73  -IKADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVV----SFGHLKDVTEEEFDRVFSLN 127
Query: 142 VKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHA-YTASKHAIVGLTKNAACEL 200
            +G     + A R +    GG I+ T+S       +  H+ Y+ SK A+    +  + + 
Sbjct: 128 TRGQFFVAREAYRHLTE--GGRIVLTSSNTSKDFSVPKHSLYSGSKGAVDSFVRIFSKDC 185
Query: 201 GRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIP-----SQKEVRKMEEFVS 255
           G   I VN ++P G  T M               E  +  IP     + ++ ++M    S
Sbjct: 186 GDKKITVNAVAPGGTVTDMF-------------HEVSHHYIPNGTSYTAEQRQQMAAHAS 232
Query: 256 GLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
            L          +D+A    +L S E  +V+G  L +DGG
Sbjct: 233 PLHR----NGWPQDVANVVGFLVSKEGEWVNGKVLTLDGG 268

>pdb|3R3S|A Chain A, Structure Of The Ygha Oxidoreductase From Salmonella Enterica Length = 294

Iteration: 1
 Score = 81.6 bits (200), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 123/274 (44%), Gaps = 35/274 (12%)
Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVI----ADVEDTLGSVLASTLAPAPVTFV 83
           RL+ + A++TGG  GIG AA   +AR GA V I    A+ ED                 +
Sbjct: 46  RLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLL 105
Query: 84  HCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVK 143
             D+S E    +L++      G LDIL   A V G Q     I D  +++F     VNV 
Sbjct: 106 PGDLSDESFARSLVHKAREALGGLDIL---ALVAGKQTAIPEIKDLTSEQFQQTFAVNVF 162
Query: 144 GMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHA--YTASKHAIVGLTKNAACELG 201
            +   I   A  ++ + G  II+T+S+        PH   Y A+K AI+  ++  A ++ 
Sbjct: 163 AL-FWITQEAIPLLPK-GASIITTSSIQAYQP--SPHLLDYAATKAAILNYSRGLAKQVA 218
Query: 202 RYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLK 261
             GIRVN ++P  + T++ ++       G+ +D+   FG   Q  +++  +         
Sbjct: 219 EKGIRVNIVAPGPIWTALQISG------GQTQDKIPQFG--QQTPMKRAGQ--------- 261
Query: 262 GTTLRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
                  ++A   +YLAS ES YV+     V GG
Sbjct: 262 -----PAELAPVYVYLASQESSYVTAEVHGVCGG 290

>pdb|4FC6|A Chain A, Studies On Dcr Shed New Light On Peroxisomal Beta-Oxidation: Crystal Structure Of The Ternary Complex Of Pdcr Length = 277

Iteration: 1
 Score = 81.6 bits (200), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 89/292 (30%), Positives = 127/292 (43%), Gaps = 48/292 (16%)
Query: 20  DDAPPSHRRL------EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLAS 73
           DD  P++R L        KVA ITGG  GIG     +F RHG   VIA    +L  VL +
Sbjct: 10  DDCLPAYRHLFCPDLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIA--SRSLPRVLTA 67
Query: 74  TLAPAPVTFVHC-----DVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIID 128
               A  T   C     DV     +   ++  +  +GR+DIL N A   GN       + 
Sbjct: 68  ARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEFGRIDILINCAA--GNFLCPAGALS 125
Query: 129 FDADEFDNVMRVNVKGMALGIKHAARVMINR----GGGCIISTASVAGVMG-GLGPHAYT 183
           F+A  F  VM ++  G      + +RV+  +     GG I++  +  G  G  L  HA +
Sbjct: 126 FNA--FKTVMDIDTSGTF----NVSRVLYEKFFRDHGGVIVNITATLGNRGQALQVHAGS 179
Query: 184 ASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPS 243
           A K A+  +T++ A E G   IRVN ++P  ++ +      R  G  +          P 
Sbjct: 180 A-KAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGT---EGLRRLGGPQASLSTKVTASPL 235
Query: 244 QKEVRKMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
           Q+           LGN         +IA + LYLAS  + YV+G  LV DGG
Sbjct: 236 QR-----------LGN-------KTEIAHSVLYLASPLASYVTGAVLVADGG 269

>pdb|3GK3|A Chain A, Crystal Structure Of Acetoacetyl-Coa Reductase From Burkholderia Pseudomallei 1710b Length = 269

Iteration: 1
 Score = 80.9 bits (198), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 74/271 (27%), Positives = 122/271 (45%), Gaps = 30/271 (11%)
Query: 32  KVAIITGGARGIGEAAVRLFARHGAKVVIADVE--DTLGSVLASTL-APAPVTFVHCDVS 88
           +VA +TGG  G+G A  R     G  V ++  E  D + + L     A         DV+
Sbjct: 26  RVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVA 85
Query: 89  LEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALG 148
             E  E      ++ +G++D+L NNAG+     +  + +     ++D VMR ++  M   
Sbjct: 86  DFESCERCAEKVLADFGKVDVLINNAGIT----RDATFMKMTKGDWDAVMRTDLDAMFNV 141
Query: 149 IKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVN 208
            K     M+ R  G I++  SV G  G  G   Y ++K  I G TK  A E  + GI VN
Sbjct: 142 TKQFIAGMVERRFGRIVNIGSVNGSRGAFGQANYASAKAGIHGFTKTLALETAKRGITVN 201
Query: 209 CISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSK 268
            +SP  +AT+M+              E +   +   K + ++   V  LG       R  
Sbjct: 202 TVSPGYLATAMV--------------EAVPQDVLEAKILPQIP--VGRLG-------RPD 238
Query: 269 DIAEAALYLASDESRYVSGHNLVVDGGVTTS 299
           ++A    +L SD++ +V+G +L ++GG+  S
Sbjct: 239 EVAALIAFLCSDDAGFVTGADLAINGGMHMS 269

>pdb|3PPI|A Chain A, Crystal Structure Of 3-Hydroxyacyl-Coa Dehydrogenase Type-2 From Mycobacterium Avium Length = 281

Iteration: 1
 Score = 80.9 bits (198), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 84/281 (29%), Positives = 125/281 (44%), Gaps = 45/281 (16%)
Query: 27  RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCD 86
           ++ EG  AI++GGA G+GEA VR     G  VVIAD+    G  LA  L      FV  +
Sbjct: 26  KQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGN-RAEFVSTN 84
Query: 87  VSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRK-------------HKSIIDFDADE 133
           V+ E+ +   I +  ++ GRL       G  G  ++                 ID   + 
Sbjct: 85  VTSEDSVLAAIEA-ANQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNG 143
Query: 134 FDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLT 193
             NV R+    +A     AA    N   G ++ TAS+AG  G +G  AY A+K  ++GLT
Sbjct: 144 TYNVARLVAASIA-----AAEPRENGERGALVLTASIAGYEGQIGQTAYAAAKAGVIGLT 198
Query: 194 KNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEF 253
             AA +L   GIRVN I+P  + T ++ +       GEE        IP  K +   +EF
Sbjct: 199 IAAARDLSSAGIRVNTIAPGTMKTPIMESV------GEEALAKFAANIPFPKRLGTPDEF 252
Query: 254 VSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDG 294
                            A+AA +L ++   Y++G  + +DG
Sbjct: 253 -----------------ADAAAFLLTNG--YINGEVMRLDG 274

>pdb|3CTM|A Chain A, Crystal Structure Of A Carbonyl Reductase From Candida Parapsilosis With Anti-Prelog Stereo-Specificity Length = 279

Iteration: 1
 Score = 80.9 bits (198), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 72/275 (26%), Positives = 129/275 (46%), Gaps = 35/275 (12%)
Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVI---ADVEDTLGSVLASTLAPAPVTFVHC 85
           L+GKVA +TG + GIG A    +A+ GA V I   +   D     L  T       +  C
Sbjct: 32  LKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAY-KC 90
Query: 86  DVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGM 145
           ++S  + +E  I+     +G +D+   NAGV   Q     + ++D+  ++ ++ V++ G+
Sbjct: 91  NISDPKSVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDS--WNKIISVDLNGV 148
Query: 146 ALGIKHAARVMINRGGGCIISTASVAGVMGGLGPH---AYTASKHAIVGLTKNAACELGR 202
                +  ++    G G +I T+S++G +  + P     Y  +K A   L K+ A E   
Sbjct: 149 YYCSHNIGKIFKKNGKGSLIITSSISGKIVNI-PQLQAPYNTAKAACTHLAKSLAIEWAP 207
Query: 203 YGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKG 262
           +  RVN ISP                 G  + +  +F   + K+++     ++ LG  +G
Sbjct: 208 FA-RVNTISP-----------------GYIDTDITDF---ASKDMKAKWWQLTPLGR-EG 245
Query: 263 TTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
            T   +++    LYLAS+ S + +G ++V+DGG T
Sbjct: 246 LT---QELVGGYLYLASNASTFTTGSDVVIDGGYT 277

>pdb|1AE1|A Chain A, Tropinone Reductase-I Complex With Nadp Length = 273

Iteration: 1
 Score = 80.5 bits (197), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 74/272 (27%), Positives = 126/272 (46%), Gaps = 25/272 (9%)
Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADV-EDTLGSVLASTLAPA-PVTFVHCD 86
           L+G  A++TGG++GIG A V   A  GA+V      E  L   L         V    CD
Sbjct: 19  LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCD 78
Query: 87  VSLEEDIENLINSTVSRY-GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGM 145
           +    + + L+ +    + G+L+IL NNAGV+     HK   DF   +++ +M  N +  
Sbjct: 79  LLSRTERDKLMQTVAHVFDGKLNILVNNAGVV----IHKEAKDFTEKDYNIIMGTNFEAA 134
Query: 146 ALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGI 205
               + A  ++     G +I  +S+AG         Y+ASK AI  +TK+ ACE  +  I
Sbjct: 135 YHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWAKDNI 194
Query: 206 RVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL 265
           RVN ++P  + T ++  A + +              P QKE  +++ F+  +    G   
Sbjct: 195 RVNSVAPGVILTPLVETAIKKN--------------PHQKE--EIDNFI--VKTPMGRAG 236
Query: 266 RSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
           + ++++    +L    + Y++G  +  DGG T
Sbjct: 237 KPQEVSALIAFLCFPAASYITGQIIWADGGFT 268

>pdb|3TPC|A Chain A, Crystal Structure Of A Hypothtical Protein Sma1452 From Sinorhizobium Meliloti 1021 Length = 257

Iteration: 1
 Score = 80.5 bits (197), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 72/241 (29%), Positives = 113/241 (46%), Gaps = 27/241 (11%)
Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDV 87
           +L+ +V I+TG + G+G A  R  A+ GA V+  D++   G   A+ L  A V F + DV
Sbjct: 4   QLKSRVFIVTGASSGLGAAVTRXLAQEGATVLGLDLKPPAGEEPAAELGAA-VRFRNADV 62
Query: 88  SLEEDIENLINSTVSRYGRLDILYNNAG------VLGNQRKHKSIIDFDADEFDNVMRVN 141
           + E D    +      +G +  L N AG      +LG    H        D F   + VN
Sbjct: 63  TNEADATAALAFAKQEFGHVHGLVNCAGTAPGEKILGRSGPHA------LDSFARTVAVN 116
Query: 142 VKGMALGIKHAARVMINRGG-------GCIISTASVAGVMGGLGPHAYTASKHAIVGLTK 194
           + G    I+ AA V  ++G        G I++TAS+A   G +G  AY ASK  +  LT 
Sbjct: 117 LIGTFNXIRLAAEVX-SQGEPDADGERGVIVNTASIAAFDGQIGQAAYAASKGGVAALTL 175
Query: 195 NAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFV 254
            AA EL R+GIRV  I+P       + +    +G  ++  + +   +P    + + EE+ 
Sbjct: 176 PAARELARFGIRVVTIAP------GIFDTPXXAGXPQDVQDALAASVPFPPRLGRAEEYA 229
Query: 255 S 255
           +
Sbjct: 230 A 230

>pdb|3ITD|A Chain A, Crystal Structure Of An Inactive 17beta-Hydroxysteroid Dehydrogenase (Y167f Mutated Form) From Fungus Cochliobolus Lunatus Length = 270

Iteration: 1
 Score = 80.5 bits (197), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 77/280 (27%), Positives = 123/280 (43%), Gaps = 38/280 (13%)
Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVI------ADVEDTLGSVLASTLAPAPVT 81
           RL+GKVA++TG  RGIG A      R GAKVV+       D E  +  + A  L    + 
Sbjct: 15  RLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKA--LGSDAIA 72
Query: 82  FVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVN 141
            +  D+    +I  L +  V+ +G LDI  +N+GV+        + D   +EFD V  +N
Sbjct: 73  -IKADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVV----SFGHLKDVTEEEFDRVFSLN 127
Query: 142 VKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHA-YTASKHAIVGLTKNAACEL 200
            +G     + A R +    GG I+ T+S       +  H+ ++ SK A+    +  + + 
Sbjct: 128 TRGQFFVAREAYRHLTE--GGRIVLTSSNTSKDFSVPKHSLFSGSKGAVDSFVRIFSKDC 185
Query: 201 GRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIP-----SQKEVRKMEEFVS 255
           G   I VN ++P G  T M               E  +  IP     + ++ ++M    S
Sbjct: 186 GDKKITVNAVAPGGTVTDMF-------------HEVSHHYIPNGTSYTAEQRQQMAAHAS 232
Query: 256 GLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
            L          +D+A    +L S E  +V+G  L +DGG
Sbjct: 233 PLHR----NGWPQDVANVVGFLVSKEGEWVNGKVLTLDGG 268

>pdb|4IBO|A Chain A, Crystal Structure Of A Putative Gluconate Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506446) Length = 271

Iteration: 1
 Score = 79.3 bits (194), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 76/275 (27%), Positives = 125/275 (45%), Gaps = 34/275 (12%)
Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPA-----PVTFV 83
           L G+ A++TG +RG+G A     A  GA+++I     T  S +A T+            V
Sbjct: 24  LGGRTALVTGSSRGLGRAMAEGLAVAGARILI---NGTDPSRVAQTVQEFRNVGHDAEAV 80
Query: 84  HCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVK 143
             DV+ E +I         +   +DIL NNAG+    +  K +I+ +  ++  V+  N+ 
Sbjct: 81  AFDVTSESEIIEAFARLDEQGIDVDILVNNAGI----QFRKPMIELETADWQRVIDTNLT 136
Query: 144 GMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRY 203
              +  + AA+ MI RG G I++  S+   +       YT +K  I  LT+  A E  +Y
Sbjct: 137 SAFMIGREAAKRMIPRGYGKIVNIGSLTSELARATVAPYTVAKGGIKMLTRAMAAEWAQY 196
Query: 204 GIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGT 263
           GI+ N I P      ML +  +   D  E D  +    P+++  +  E        L GT
Sbjct: 197 GIQANAIGP----GYMLTDMNQALIDNPEFDAWVKARTPAKRWGKPQE--------LVGT 244
Query: 264 TLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT 298
                     A++L++  S YV+G  + VDGG+ +
Sbjct: 245 ----------AVFLSASASDYVNGQIIYVDGGMLS 269

>pdb|4IIU|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier Protein]reductase From Escherichia Coli Strain Cft073 Complexed With Nadp+ At 2.1 A Resolution Length = 267

Iteration: 1
 Score = 78.6 bits (192), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 72/269 (26%), Positives = 130/269 (48%), Gaps = 39/269 (14%)
Query: 35  IITGGARGIGEAAVRLFARHGAKVVI------ADVEDTLGSVLASTLAPAPVTFVHCDVS 88
           ++TG ++GIG A  R  A  G  + +      A  ++TL +++A+      ++F   DV+
Sbjct: 30  LVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSF---DVA 86
Query: 89  LEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALG 148
             E    ++   ++++G    + +NAG+     +  +      D++D V+  N+      
Sbjct: 87  NREQCREVLEHEIAQHGAWYGVVSNAGI----ARDAAFPALSNDDWDAVIHTNLDSFYNV 142
Query: 149 IKHAARVMIN-RGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRV 207
           I+     MI  R GG II+ +SV+GVMG  G   Y+A+K  I+G TK  A EL +  I V
Sbjct: 143 IQPCIMPMIGARQGGRIITLSSVSGVMGNRGQVNYSAAKAGIIGATKALAIELAKRKITV 202
Query: 208 NCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRS 267
           NCI+P  + T M+          E E+  +   + S   +++M +              +
Sbjct: 203 NCIAPGLIDTGMI----------EMEESALKEAM-SMIPMKRMGQ--------------A 237
Query: 268 KDIAEAALYLASDESRYVSGHNLVVDGGV 296
           +++A  A YL SD + YV+   + ++GG+
Sbjct: 238 EEVAGLASYLMSDIAGYVTRQVISINGGM 266

>pdb|1XG5|A Chain A, Structure Of Human Putative Dehydrogenase Mgc4172 In Complex With Nadp Length = 279

Iteration: 1
 Score = 78.2 bits (191), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 105/209 (50%), Gaps = 16/209 (7%)
Query: 22  APPSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVV-----IADVEDTLGSVLASTLA 76
           A P   R   ++A++TG + GIG A  R   + G KVV     + ++E+ L +   S   
Sbjct: 23  ARPGMERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEE-LAAECKSAGY 81
Query: 77  PAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDN 136
           P  +    CD+S EEDI ++ ++  S++  +DI  NNAG+     +  +++      + +
Sbjct: 82  PGTLIPYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLA----RPDTLLSGSTSGWKD 137
Query: 137 VMRVNVKGMALGIKHAARVMINRG--GGCIISTASVAG--VMGGLGPHAYTASKHAIVGL 192
           +  VNV  +++  + A + M  R    G II+  S++G  V+     H Y+A+K+A+  L
Sbjct: 138 MFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTAL 197
Query: 193 TKNAACEL--GRYGIRVNCISPFGVATSM 219
           T+    EL   +  IR  CISP  V T  
Sbjct: 198 TEGLRQELREAQTHIRATCISPGVVETQF 226

>pdb|3G1T|A Chain A, Crystal Structure Of Short Chain Dehydrogenase From Salmonella Enterica Subsp. Enterica Serovar Typhi Str. Ct18 Length = 258

Iteration: 1
 Score = 77.8 bits (190), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 59/206 (28%), Positives = 99/206 (48%), Gaps = 8/206 (3%)
Query: 24  PSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVI-ADVEDTLGSV---LASTLAPAP 79
           P    L+ ++ ++TG + GIG  A   +AR+GA V++    E+ L  V   +A      P
Sbjct: 7   PKQDLLQNRIILVTGASDGIGREAALTYARYGATVILLGRNEEKLRRVAQHIADEQHVQP 66
Query: 80  VTF-VHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVM 138
             F +       E+   + +   + Y RLD + +NAG+LG   +   + + D   + +VM
Sbjct: 67  QWFTLDLLTCTAEECRQVADRIAAHYPRLDGVLHNAGLLG---EIGPMSEQDPQIWQDVM 123
Query: 139 RVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAAC 198
           +VNV    +  +    +++    G ++ T+S  G  G     AY  SK A  G+ +  A 
Sbjct: 124 QVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYATSKFATEGMMQVLAD 183
Query: 199 ELGRYGIRVNCISPFGVATSMLVNAW 224
           E     +RVNCI+P G  TSM  +A+
Sbjct: 184 EYQNRSLRVNCINPGGTRTSMRASAF 209

>pdb|3AI1|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Reveals The Structure Bases Of Its Catalytic Mechanism And High Substrate Selectivity Length = 263

Iteration: 1
 Score = 77.8 bits (190), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 77/276 (27%), Positives = 123/276 (44%), Gaps = 29/276 (10%)
Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVV-IADVEDTLGSVLASTLAPAPVTF--VHC 85
           + GKVA+ITG + GIG A    FA+ GA +V +A   D L     S      V    V  
Sbjct: 5   ISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAV 64
Query: 86  DVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGM 145
           DV+  E ++ ++ S  S +G  DIL NNAG   N+    +I++   +++     ++V   
Sbjct: 65  DVATPEGVDAVVESVRSSFGGADILVNNAGTGSNE----TIMEAADEKWQFYWELHVMAA 120
Query: 146 ALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGI 205
               +     M  RGGG II  AS+  V        Y  +K A++  +K  A E+ +  I
Sbjct: 121 VRLARGLVPGMRARGGGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLATEVIKDNI 180
Query: 206 RVNCISPFGVATSMLVNAWR-----NSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNL 260
           RVNCI+P  + T   +   +     N GD +   + +        E   ++ F S     
Sbjct: 181 RVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSV------ADEHAPIKRFAS----- 229
Query: 261 KGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGV 296
                  +++A   ++L S+ + Y  G    VDGG+
Sbjct: 230 ------PEELANFFVFLCSERATYSVGSAYFVDGGM 259

>pdb|1IPE|A Chain A, Tropinone Reductase-Ii Complexed With Nadph Length = 259

Iteration: 1
 Score = 77.0 bits (188), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 75/277 (27%), Positives = 128/277 (46%), Gaps = 28/277 (10%)
Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADV-EDTLGSVLASTLAPA-PVTFVHCD 86
           LEG  A++TGG+RGIG   V   A  GA V      +  L   L    +    V    CD
Sbjct: 6   LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCD 65
Query: 87  VSLEEDIENLINSTVSRY-GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGM 145
           +S   + + L+N+  + + G+L+IL NNAG++     +K   D+  +++  +M +N +  
Sbjct: 66  LSSRSERQELMNTVANHFHGKLNILVNNAGIV----IYKEAKDYTVEDYSLIMSINFEAA 121
Query: 146 ALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGI 205
                 A   +     G ++  +SV+G +       Y A+K A+  LT+  A E  +  I
Sbjct: 122 YHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNI 181
Query: 206 RVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL 265
           RVN + P  +ATS++    ++     E+ E +N  +  +  +R+M E             
Sbjct: 182 RVNGVGPGVIATSLVEMTIQDP----EQKENLN-KLIDRCALRRMGE------------- 223
Query: 266 RSKDIAEAALYLASDESRYVSGHNLVVDGGVTTSRNC 302
             K++A    +L    + YV+G  + VDGG+    NC
Sbjct: 224 -PKELAAMVAFLCFPAASYVTGQIIYVDGGLMA--NC 257

>pdb|4IQG|C Chain C, Crystal Structure Of Bpro0239 Oxidoreductase From Polaromonas Sp. Js666 In Nadp Bound Form Length = 271

Iteration: 1
 Score = 77.0 bits (188), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 77/271 (28%), Positives = 118/271 (43%), Gaps = 33/271 (12%)
Query: 32  KVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGS---VLASTLAPAPVTFVHCDVS 88
           KV +ITGG+RGIG A+  L AR G  V +    ++  +   V     A      V  DV+
Sbjct: 26  KVVLITGGSRGIGAASALLAARQGYAVAVNYASNSAAADEVVRQIREAGGQALAVQADVA 85
Query: 89  LEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALG 148
            E ++     +  ++ GRL  L NNAGV+    +   I     +       +NV G  L 
Sbjct: 86  KEREVLAXFETVDAQLGRLSALVNNAGVVDQTTRVDGIT---LERLQRXFEINVFGSFLC 142
Query: 149 IKHAARVMINR---GGGCIISTASVAGVMGGLGPHA-YTASKHAIVGLTKNAACELGRYG 204
            + A +    R    GG I++ +S A  +G  G +  Y A+K AI   T   A E+   G
Sbjct: 143 AREAVKRXSTRYGGSGGSIVNVSSAAARLGSPGQYVDYAAAKGAIDTFTLGLAKEVATEG 202
Query: 205 IRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT 264
           IRVN + P  + T +       SG        +   +P Q+                GT 
Sbjct: 203 IRVNAVRPGIIETDI-----HASGGLPNRARDVAPQVPXQR---------------AGT- 241
Query: 265 LRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
             ++++AEA ++L  D++ Y +G  L V GG
Sbjct: 242 --AREVAEAIVWLLGDQASYTTGALLDVTGG 270

>pdb|2AE2|A Chain A, Tropinone Reductase-Ii Complexed With Nadp+ And Pseudotropine Length = 260

Iteration: 1
 Score = 77.0 bits (188), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 75/277 (27%), Positives = 128/277 (46%), Gaps = 28/277 (10%)
Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADV-EDTLGSVLASTLAPA-PVTFVHCD 86
           LEG  A++TGG+RGIG   V   A  GA V      +  L   L    +    V    CD
Sbjct: 7   LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCD 66
Query: 87  VSLEEDIENLINSTVSRY-GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGM 145
           +S   + + L+N+  + + G+L+IL NNAG++     +K   D+  +++  +M +N +  
Sbjct: 67  LSSRSERQELMNTVANHFHGKLNILVNNAGIV----IYKEAKDYTVEDYSLIMSINFEAA 122
Query: 146 ALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGI 205
                 A   +     G ++  +SV+G +       Y A+K A+  LT+  A E  +  I
Sbjct: 123 YHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNI 182
Query: 206 RVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL 265
           RVN + P  +ATS++    ++     E+ E +N  +  +  +R+M E             
Sbjct: 183 RVNGVGPGVIATSLVEMTIQDP----EQKENLN-KLIDRCALRRMGE------------- 224
Query: 266 RSKDIAEAALYLASDESRYVSGHNLVVDGGVTTSRNC 302
             K++A    +L    + YV+G  + VDGG+    NC
Sbjct: 225 -PKELAAMVAFLCFPAASYVTGQIIYVDGGLMA--NC 258

>pdb|3TJR|A Chain A, Crystal Structure Of A Rv0851c Ortholog Short Chain Dehydrogenase From Mycobacterium Paratuberculosis Length = 301

Iteration: 1
 Score = 76.6 bits (187), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 64/224 (28%), Positives = 112/224 (50%), Gaps = 10/224 (4%)
Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTF--VHCD 86
            +G+ A++TGGA GIG A    FAR GA++V++DV+        + L         V CD
Sbjct: 29  FDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCD 88
Query: 87  VSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMA 146
           V   +++  L +      G +D++++NAG++        +   + D++  V+ +++ G  
Sbjct: 89  VRHLDEMVRLADEAFRLLGGVDVVFSNAGIV----VAGPLAQMNHDDWRWVIDIDLWGSI 144
Query: 147 LGIKHAARVMINRG-GGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGI 205
             ++     ++ +G GG I  TAS AG++   G   Y  +K+ +VGL +  A E+   GI
Sbjct: 145 HAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAGLGTYGVAKYGVVGLAETLAREVKPNGI 204
Query: 206 RVNCISPFGVATSMLVNAWRNSGD--GEEEDECMNFG-IPSQKE 246
            V+ + P  V T ++ N+ R  G   G        FG +P+Q E
Sbjct: 205 GVSVLCPMVVETKLVSNSERIRGADYGMSATPEGAFGPLPTQDE 248

>pdb|3F5Q|A Chain A, Crystal Structure Of Putative Short Chain Dehydrogenase From Escherichia Coli Cft073 Length = 262

Iteration: 1
 Score = 76.6 bits (187), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 60/206 (29%), Positives = 98/206 (47%), Gaps = 9/206 (4%)
Query: 24  PSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVV-IADVEDTLGSV---LASTLAPAP 79
           P    L  ++ ++TG + GIG  A   +AR+GA V+ +   E+ L  V   +       P
Sbjct: 7   PKQDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQP 66
Query: 80  VTFV-HCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVM 138
             F+        ED + L       Y RLD + +NAG+LG+      + + D   + +VM
Sbjct: 67  QWFILDLLTCTSEDCQQLAQRIAVNYPRLDGVLHNAGLLGD---VCPMSEQDPQVWQDVM 123
Query: 139 RVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAAC 198
           +VNV    +  +    +++    G ++ T+S  G  G     AY ASK A  G+ +  A 
Sbjct: 124 QVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLAD 183
Query: 199 ELGRYGIRVNCISPFGVATSMLVNAW 224
           E  +  +RVNCI+P G  T+M  +A+
Sbjct: 184 EYQQR-LRVNCINPGGTRTAMRASAF 208

>pdb|1GZ6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat Peroxisomal Multifunctional Enzyme Type 2 Length = 319

Iteration: 1
 Score = 76.6 bits (187), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 56/193 (29%), Positives = 93/193 (48%), Gaps = 12/193 (6%)
Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVE-DTLGSVLASTLAPAPVTFVH-- 84
           R +G+V ++TG   G+G A    FA  GA VV+ D+  D  G    S+ A   V  +   
Sbjct: 6   RFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRR 65
Query: 85  -----CDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMR 139
                 +    E  E L+ + +  +GR+D++ NNAG+L    + +S      +++D + R
Sbjct: 66  GGKAVANYDSVEAGEKLVKTALDTFGRIDVVVNNAGIL----RDRSFSRISDEDWDIIQR 121
Query: 140 VNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACE 199
           V+++G     + A      +  G II TAS +G+ G  G   Y+A+K  ++GL      E
Sbjct: 122 VHLRGSFQVTRAAWDHXKKQNYGRIIXTASASGIYGNFGQANYSAAKLGLLGLANTLVIE 181
Query: 200 LGRYGIRVNCISP 212
             +  I  N I+P
Sbjct: 182 GRKNNIHCNTIAP 194

>pdb|3AI3|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Length = 263

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 78/276 (28%), Positives = 123/276 (44%), Gaps = 29/276 (10%)
Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVV-IADVEDTLGSVLASTLAPAPVTF--VHC 85
           + GKVA+ITG + GIG A    FA+ GA +V +A   D L     S      V    V  
Sbjct: 5   ISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAV 64
Query: 86  DVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGM 145
           DV+  E ++ ++ S  S +G  DIL NNAG   N+   ++  D     +  ++ +    +
Sbjct: 65  DVATPEGVDAVVESVRSSFGGADILVNNAGTGSNETIMEAA-DEKWQFYWELLVMAAVRL 123
Query: 146 ALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGI 205
           A G+    R    RGGG II  AS+  V        Y  +K A++  +K  A E+ +  I
Sbjct: 124 ARGLVPGMRA---RGGGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLATEVIKDNI 180
Query: 206 RVNCISPFGVATSMLVNAWR-----NSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNL 260
           RVNCI+P  + T   +   +     N GD +   + +        E   ++ F S     
Sbjct: 181 RVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSV------ADEHAPIKRFAS----- 229
Query: 261 KGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGV 296
                  +++A   ++L S+ + Y  G    VDGG+
Sbjct: 230 ------PEELANFFVFLCSERATYSVGSAYFVDGGM 259

>pdb|3OIC|A Chain A, Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl) From B. Subtilis (Apo Form) Length = 258

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/271 (24%), Positives = 117/271 (43%), Gaps = 33/271 (12%)
Query: 30  EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAP---APVTFVHCD 86
           + K A++TG +RG+G+AA    A +G  +VI        ++  +         V  V  +
Sbjct: 3   QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKAN 62
Query: 87  VSLEEDIENLINSTVSRYGRLDILYNNA--GVLGNQRKHKSIIDFDADEFDNVMRVNVKG 144
           V     I+ +       +GRLD+  NNA  GVL      + +++ +   +D  M +N K 
Sbjct: 63  VGQPAKIKEMFQQIDETFGRLDVFVNNAASGVL------RPVMELEETHWDWTMNINAKA 116
Query: 145 MALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYG 204
           +    + AA++M   GGG I+S +S+  +           SK A+  LT+  A EL    
Sbjct: 117 LLFCAQEAAKLMEKNGGGHIVSISSLGSIRYLENYTTVGVSKAALEALTRYLAVELSPKQ 176
Query: 205 IRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT 264
           I VN +S   + T    +A ++  + E+  E      P+                  G  
Sbjct: 177 IIVNAVSGGAIDT----DALKHFPNREDLLEDARQNTPA------------------GRM 214
Query: 265 LRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
           +  KD+ +   +L S ++  + G  ++VDGG
Sbjct: 215 VEIKDMVDTVEFLVSSKADMIRGQTIIVDGG 245

>pdb|3GDF|A Chain A, Crystal Structure Of The Nadp-Dependent Mannitol Dehydrogenase From Cladosporium Herbarum. Length = 267

Iteration: 1
 Score = 74.7 bits (182), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 74/279 (26%), Positives = 125/279 (44%), Gaps = 39/279 (13%)
Query: 29  LEGKVAIITG--GARGIGEAAVRLFARHGAKVVIADVEDTLGSV-----LASTLAPAPVT 81
           L+GKV ++TG  G +G+G  A R  A  GA V I       G+      L  T       
Sbjct: 18  LKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKA 77
Query: 82  FVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVN 141
           +  C V   E  E L+   V+ +G++D    NAG   +      I+D   + +++V++V+
Sbjct: 78  Y-KCQVDSYESCEKLVKDVVADFGQIDAFIANAGATAD----SGILDGSVEAWNHVVQVD 132
Query: 142 VKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPH--AYTASKHAIVGLTKNAACE 199
           + G     K        RG G ++ TAS++G +        +Y  +K   + + ++ A E
Sbjct: 133 LNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANFPQEQTSYNVAKAGCIHMARSLANE 192
Query: 200 LGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGN 259
              +  RVN ISP  + T +                  +F +P  KE +++   +  +G 
Sbjct: 193 WRDFA-RVNSISPGYIDTGL-----------------SDF-VP--KETQQLWHSMIPMGR 231
Query: 260 LKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT 298
                  +K++  A +Y ASD S Y +G +L++DGG TT
Sbjct: 232 ----DGLAKELKGAYVYFASDASTYTTGADLLIDGGYTT 266

>pdb|3UN1|A Chain A, Crystal Structure Of An Oxidoreductase From Sinorhizobium Meliloti 1021 Length = 260

Iteration: 1
 Score = 74.7 bits (182), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 73/281 (25%), Positives = 124/281 (44%), Gaps = 48/281 (17%)
Query: 25  SHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVH 84
           S  R + KV +ITG ++GIG   VR +     +VV            + ++ P+    +H
Sbjct: 22  SXXRNQQKVVVITGASQGIGAGLVRAYRDRNYRVV----------ATSRSIKPSADPDIH 71
Query: 85  C---DVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVN 141
               D+S  E  + ++   + R+GR+D L NNAGV       K  ++   +++D+ + VN
Sbjct: 72  TVAGDISKPETADRIVREGIERFGRIDSLVNNAGVF----LAKPFVEXTQEDYDHNLGVN 127
Query: 142 VKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTAS--KHAIVGLTKNAACE 199
           V G     + AA   + +G G I+S  +       +G  +  AS  K  +  +T++ A E
Sbjct: 128 VAGFFHITQRAAAEXLKQGSGHIVSITTSLVDQPXVGXPSALASLTKGGLNAVTRSLAXE 187
Query: 200 LGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGN 259
             R G+RVN +SP GV                         I +     +    ++GL  
Sbjct: 188 FSRSGVRVNAVSP-GV-------------------------IKTPXHPAETHSTLAGLHP 221
Query: 260 LKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTSR 300
           + G     +D+ +A LYL  + + +++G  L VDGG    R
Sbjct: 222 V-GRXGEIRDVVDAVLYL--EHAGFITGEILHVDGGQNAGR 259

>pdb|3JQ7|A Chain A, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Inhibitor 6- Phenylpteridine-2,4,7-Triamine (Dx2) Length = 288

Iteration: 1
 Score = 74.7 bits (182), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 80/299 (26%), Positives = 126/299 (42%), Gaps = 55/299 (18%)
Query: 24  PSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVI---------ADVEDTLGSVLAST 74
           P    +E   A++TG A+ IG A      + G +VVI           + D L    ++T
Sbjct: 16  PRGSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNT 75
Query: 75  LAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEF 134
                    + +V L    E +INS    +GR D+L NNA           ++  D ++ 
Sbjct: 76  AVVXQADLTNSNV-LPASCEEIINSCFRAFGRCDVLVNNASAF----YPTPLVQGDHEDN 130
Query: 135 DNVMRVNVKGMAL-GIKHAARVMI-----NRGGG----CIISTASVAGVMGGLGPHA--- 181
            N   V  +   L G    A  ++      R  G    C  S  S+  +   +       
Sbjct: 131 SNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPXMA 190
Query: 182 ---YTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMN 238
              Y   KHA+VGLT++AA EL  YGIRVN ++P     S+L  A      GEEE +   
Sbjct: 191 FSLYNMGKHALVGLTQSAALELAPYGIRVNGVAP---GVSLLPVAM-----GEEEKDKWR 242
Query: 239 FGIPSQKEVRKMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
             +P              LG  + +   ++ IA+A ++L S  ++Y++G  + VDGG++
Sbjct: 243 RKVP--------------LGRREAS---AEQIADAVIFLVSGSAQYITGSIIKVDGGLS 284

>pdb|3BMC|A Chain A, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Substrate (Folate) Length = 288

Iteration: 1
 Score = 74.7 bits (182), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 80/299 (26%), Positives = 126/299 (42%), Gaps = 55/299 (18%)
Query: 24  PSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVI---------ADVEDTLGSVLAST 74
           P    +E   A++TG A+ IG A      + G +VVI           + D L    ++T
Sbjct: 16  PRGSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNT 75
Query: 75  LAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEF 134
                    + +V L    E +INS    +GR D+L NNA           ++  D ++ 
Sbjct: 76  AVVCQADLTNSNV-LPASCEEIINSCFRAFGRCDVLVNNASAF----YPTPLVQGDHEDN 130
Query: 135 DNVMRVNVKGMAL-GIKHAARVMI-----NRGGG----CIISTASVAGVMGGLGPHA--- 181
            N   V  +   L G    A  ++      R  G    C  S  S+  +   +       
Sbjct: 131 SNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPXMA 190
Query: 182 ---YTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMN 238
              Y   KHA+VGLT++AA EL  YGIRVN ++P     S+L  A      GEEE +   
Sbjct: 191 FSLYNMGKHALVGLTQSAALELAPYGIRVNGVAP---GVSLLPVAM-----GEEEKDKWR 242
Query: 239 FGIPSQKEVRKMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
             +P              LG  + +   ++ IA+A ++L S  ++Y++G  + VDGG++
Sbjct: 243 RKVP--------------LGRREAS---AEQIADAVIFLVSGSAQYITGSIIKVDGGLS 284

>pdb|3JQ7|B Chain B, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Inhibitor 6- Phenylpteridine-2,4,7-Triamine (Dx2) Length = 288

Iteration: 1
 Score = 74.7 bits (182), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 80/299 (26%), Positives = 126/299 (42%), Gaps = 55/299 (18%)
Query: 24  PSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVI---------ADVEDTLGSVLAST 74
           P    +E   A++TG A+ IG A      + G +VVI           + D L    ++T
Sbjct: 16  PRGSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNT 75
Query: 75  LAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEF 134
                    + +V L    E +INS    +GR D+L NNA           ++  D ++ 
Sbjct: 76  AVVXQADLTNSNV-LPASCEEIINSCFRAFGRCDVLVNNASAF----YPTPLVQGDHEDN 130
Query: 135 DNVMRVNVKGMAL-GIKHAARVMI-----NRGGG----CIISTASVAGVMGGLGPHA--- 181
            N   V  +   L G    A  ++      R  G    C  S  S+  +   +       
Sbjct: 131 SNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMA 190
Query: 182 ---YTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMN 238
              Y   KHA+VGLT++AA EL  YGIRVN ++P     S+L  A      GEEE +   
Sbjct: 191 FSLYNMGKHALVGLTQSAALELAPYGIRVNGVAP---GVSLLPVAM-----GEEEKDKWR 242
Query: 239 FGIPSQKEVRKMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
             +P              LG  + +   ++ IA+A ++L S  ++Y++G  + VDGG++
Sbjct: 243 RKVP--------------LGRREAS---AEQIADAVIFLVSGSAQYITGSIIKVDGGLS 284

>pdb|3BMC|B Chain B, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Substrate (Folate) Length = 288

Iteration: 1
 Score = 74.3 bits (181), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 80/299 (26%), Positives = 126/299 (42%), Gaps = 55/299 (18%)
Query: 24  PSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVI---------ADVEDTLGSVLAST 74
           P    +E   A++TG A+ IG A      + G +VVI           + D L    ++T
Sbjct: 16  PRGSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNT 75
Query: 75  LAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEF 134
                    + +V L    E +INS    +GR D+L NNA           ++  D ++ 
Sbjct: 76  AVVCQADLTNSNV-LPASCEEIINSCFRAFGRCDVLVNNASAF----YPTPLVQGDHEDN 130
Query: 135 DNVMRVNVKGMAL-GIKHAARVMI-----NRGGG----CIISTASVAGVMGGLGPHA--- 181
            N   V  +   L G    A  ++      R  G    C  S  S+  +   +       
Sbjct: 131 SNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMA 190
Query: 182 ---YTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMN 238
              Y   KHA+VGLT++AA EL  YGIRVN ++P     S+L  A      GEEE +   
Sbjct: 191 FSLYNMGKHALVGLTQSAALELAPYGIRVNGVAP---GVSLLPVAM-----GEEEKDKWR 242
Query: 239 FGIPSQKEVRKMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
             +P              LG  + +   ++ IA+A ++L S  ++Y++G  + VDGG++
Sbjct: 243 RKVP--------------LGRREAS---AEQIADAVIFLVSGSAQYITGSIIKVDGGLS 284

>pdb|3PXX|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Bound To Nicotinamide Adenine Dinucleotide Length = 287

Iteration: 1
 Score = 74.3 bits (181), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 89/302 (29%), Positives = 135/302 (44%), Gaps = 50/302 (16%)
Query: 23  PPSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADV---EDTLGSVLAST--LAP 77
           P S  R++ KV ++TGGARG G +     A  GA +++ D+    +T    LA++  L  
Sbjct: 2   PGSMGRVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEE 61
Query: 78  APVTF---------VHCDVSLEEDIENLINSTVSRYGRLDILYNNAGV--LGNQRKHKSI 126
           A +              DV     +   + + V+ +G+LD++  NAG+  LG    H  +
Sbjct: 62  AGLEVEKTGRKAYTAEVDVRDRAAVSRELANAVAEFGKLDVVVANAGICPLG---AHLPV 118
Query: 127 IDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVM-----------G 175
             F AD FD    V+  G+ +   HAA   +   G  II+T SVAG++            
Sbjct: 119 QAF-ADAFD----VDFVGV-INTVHAALPYLT-SGASIITTGSVAGLIAAAQPPGAGGPQ 171
Query: 176 GLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNA--WRNSGDGEEE 233
           G G   Y+ +K  +   T   A +L    IR N I P  V T ML +A  +R      E 
Sbjct: 172 GPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEA 231
Query: 234 DECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVD 293
                   PS+ +   +  F   +  +    + + DI+ A  +LASDESRYV+G    VD
Sbjct: 232 --------PSRADA--LLAF-PAMQAMPTPYVEASDISNAVCFLASDESRYVTGLQFKVD 280
Query: 294 GG 295
            G
Sbjct: 281 AG 282

>pdb|3SVT|A Chain A, Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Ulcerans Length = 281

Iteration: 1
 Score = 74.3 bits (181), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 62/221 (28%), Positives = 101/221 (45%), Gaps = 25/221 (11%)
Query: 80  VTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMR 139
           + +   D++ E++    +++  + +GRL  + + AG          I   D++ +   + 
Sbjct: 65  IRYEPTDITNEDETARAVDAVTAWHGRLHGVVHCAG---GSENIGPITQVDSEAWRRTVD 121
Query: 140 VNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACE 199
           +NV G    +KHAAR M+  GGG  +  +S+A         AY  +K A+  L + AA E
Sbjct: 122 LNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHRWFGAYGVTKSAVDHLMQLAADE 181
Query: 200 LGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGN 259
           LG   +RVN I P G+  + LV A   S +    D  M   +P Q EV            
Sbjct: 182 LGASWVRVNSIRP-GLIRTDLVAAITESAE-LSSDYAMCTPLPRQGEV------------ 227
Query: 260 LKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTSR 300
                   +D+A  A++L SD + +V+G  + VDGG    R
Sbjct: 228 --------EDVANMAMFLLSDAASFVTGQVINVDGGQMLRR 260

>pdb|1CYD|A Chain A, Carbonyl Reductase Complexed With Nadph And 2-Propanol Length = 244

Iteration: 1
 Score = 73.9 bits (180), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 75/273 (27%), Positives = 114/273 (41%), Gaps = 35/273 (12%)
Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVV-IADVEDTLGSVLASTLAPAPVTFVHCDV 87
             G  A++TG  +GIG   V+     GAKVV +      L S+        PV     D 
Sbjct: 5   FSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDW 64
Query: 88  SLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMAL 147
              E         +   G +D+L NNA ++  Q      ++   + FD    VN++ +  
Sbjct: 65  DATE-------KALGGIGPVDLLVNNAALVIMQ----PFLEVTKEAFDRSFSVNLRSVFQ 113
Query: 148 GIKHAARVMINRG-GGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIR 206
             +  AR MINRG  G I++ +S+   +       Y+++K A+  LTK  A ELG + IR
Sbjct: 114 VSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHKIR 173
Query: 207 VNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLR 266
           VN ++P  V T M        G     D      +  +  +RK  E              
Sbjct: 174 VNSVNPTVVLTDM--------GKKVSADPEFARKLKERHPLRKFAEV------------- 212
Query: 267 SKDIAEAALYLASDESRYVSGHNLVVDGGVTTS 299
            +D+  + L+L SD S   SG  ++VD G   S
Sbjct: 213 -EDVVNSILFLLSDRSASTSGGGILVDAGYLAS 244

>pdb|3SJU|A Chain A, Hedamycin Polyketide Ketoreductase Bound To Nadph Length = 279

Iteration: 1
 Score = 73.6 bits (179), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 75/269 (27%), Positives = 118/269 (43%), Gaps = 21/269 (7%)
Query: 32  KVAIITGGARGIGEAAVRLFARHGAKVV--IADVEDTLGSVLASTLAPAPVTFVHCDVSL 89
           + A +TG + GIG A  R  A  G  V     D ++   +V     A   V    CDV+ 
Sbjct: 25  QTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTS 84
Query: 90  EEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGI 149
            +++   + + V R+G + IL N+AG  G         D D   + +V+  N+ G+    
Sbjct: 85  TDEVHAAVAAAVERFGPIGILVNSAGRNGG----GETADLDDALWADVLDTNLTGVFRVT 140
Query: 150 KHAARV--MINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRV 207
           +   R   M   G G I++ AS  G  G +    YTASKH +VG TK+   EL + GI V
Sbjct: 141 REVLRAGGMREAGWGRIVNIASTGGKQGVMYAAPYTASKHGVVGFTKSVGFELAKTGITV 200
Query: 208 NCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRS 267
           N + P  V T M             E    ++G+ +++EV +       LG         
Sbjct: 201 NAVCPGYVETPMAERV--------REGYARHWGV-TEQEVHERFNAKIPLGRYS----TP 247
Query: 268 KDIAEAALYLASDESRYVSGHNLVVDGGV 296
           +++A    YL +D +  ++   L V GG+
Sbjct: 248 EEVAGLVGYLVTDAAASITAQALNVCGGL 276

>pdb|2C7V|A Chain A, Structure Of Trypanosoma Brucei Pteridine Reductase (Ptr1) In Ternary Complex With Cofactor And The Antifolate Methotrexate Length = 268

Iteration: 1
 Score = 73.6 bits (179), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 79/294 (26%), Positives = 125/294 (42%), Gaps = 55/294 (18%)
Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVI---------ADVEDTLGSVLASTLAPAP 79
           +E   A++TG A+ IG A      + G +VVI           + D L    ++T     
Sbjct: 1   MEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVXQ 60
Query: 80  VTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMR 139
               + +V L    E +INS    +GR D+L NNA           ++  D ++  N   
Sbjct: 61  ADLTNSNV-LPASCEEIINSCFRAFGRCDVLVNNASAF----YPTPLVQGDHEDNSNGKT 115
Query: 140 VNVKGMAL-GIKHAARVMI-----NRGGG----CIISTASVAGVMGGLGPHA------YT 183
           V  +   L G    A  ++      R  G    C  S  S+  +   +          Y 
Sbjct: 116 VETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPXMAFSLYN 175
Query: 184 ASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPS 243
             KHA+VGLT++AA EL  YGIRVN ++P     S+L  A      GEEE +     +P 
Sbjct: 176 MGKHALVGLTQSAALELAPYGIRVNGVAP---GVSLLPVAM-----GEEEKDKWRRKVP- 226
Query: 244 QKEVRKMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
                        LG  + +   ++ IA+A ++L S  ++Y++G  + VDGG++
Sbjct: 227 -------------LGRREAS---AEQIADAVIFLVSGSAQYITGSIIKVDGGLS 264

>pdb|2WD7|B Chain B, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Complex With Nadp And Ddd00066750 Length = 268

Iteration: 1
 Score = 73.6 bits (179), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 79/294 (26%), Positives = 125/294 (42%), Gaps = 55/294 (18%)
Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVI---------ADVEDTLGSVLASTLAPAP 79
           +E   A++TG A+ IG A      + G +VVI           + D L    ++T     
Sbjct: 1   MEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVXQ 60
Query: 80  VTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMR 139
               + +V L    E +INS    +GR D+L NNA           ++  D ++  N   
Sbjct: 61  ADLTNSNV-LPASCEEIINSCFRAFGRCDVLVNNASAF----YPTPLVQGDHEDNSNGKT 115
Query: 140 VNVKGMAL-GIKHAARVMI-----NRGGG----CIISTASVAGVMGGLGPHA------YT 183
           V  +   L G    A  ++      R  G    C  S  S+  +   +          Y 
Sbjct: 116 VETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLYN 175
Query: 184 ASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPS 243
             KHA+VGLT++AA EL  YGIRVN ++P     S+L  A      GEEE +     +P 
Sbjct: 176 MGKHALVGLTQSAALELAPYGIRVNGVAP---GVSLLPVAM-----GEEEKDKWRRKVP- 226
Query: 244 QKEVRKMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
                        LG  + +   ++ IA+A ++L S  ++Y++G  + VDGG++
Sbjct: 227 -------------LGRREAS---AEQIADAVIFLVSGSAQYITGSIIKVDGGLS 264

>pdb|2WD7|A Chain A, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Complex With Nadp And Ddd00066750 Length = 268

Iteration: 1
 Score = 73.6 bits (179), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 79/294 (26%), Positives = 125/294 (42%), Gaps = 55/294 (18%)
Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVI---------ADVEDTLGSVLASTLAPAP 79
           +E   A++TG A+ IG A      + G +VVI           + D L    ++T     
Sbjct: 1   MEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQ 60
Query: 80  VTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMR 139
               + +V L    E +INS    +GR D+L NNA           ++  D ++  N   
Sbjct: 61  ADLTNSNV-LPASCEEIINSCFRAFGRCDVLVNNASAF----YPTPLVQGDHEDNSNGKT 115
Query: 140 VNVKGMAL-GIKHAARVMI-----NRGGG----CIISTASVAGVMGGLGPHA------YT 183
           V  +   L G    A  ++      R  G    C  S  S+  +   +          Y 
Sbjct: 116 VETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLYN 175
Query: 184 ASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPS 243
             KHA+VGLT++AA EL  YGIRVN ++P     S+L  A      GEEE +     +P 
Sbjct: 176 MGKHALVGLTQSAALELAPYGIRVNGVAP---GVSLLPVAM-----GEEEKDKWRRKVP- 226
Query: 244 QKEVRKMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
                        LG  + +   ++ IA+A ++L S  ++Y++G  + VDGG++
Sbjct: 227 -------------LGRREAS---AEQIADAVIFLVSGSAQYITGSIIKVDGGLS 264

>pdb|3F1L|A Chain A, The 0.95 A Structure Of An Oxidoreductase, Ycik From E.Coli Length = 252

Iteration: 1
 Score = 72.4 bits (176), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 98/206 (47%), Gaps = 9/206 (4%)
Query: 24  PSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVV-IADVEDTLGSV---LASTLAPAP 79
           P    L  ++ ++TG + GIG  A   +AR+GA V+ +   E+ L  V   +       P
Sbjct: 5   PKQDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQP 64
Query: 80  VTFV-HCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVM 138
             F+        E+ + L       Y RLD + +NAG+LG+      + + +   + +VM
Sbjct: 65  QWFILDLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGD---VCPMSEQNPQVWQDVM 121
Query: 139 RVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAAC 198
           +VNV    +  +    +++    G ++ T+S  G  G     AY ASK A  G+ +  A 
Sbjct: 122 QVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLAD 181
Query: 199 ELGRYGIRVNCISPFGVATSMLVNAW 224
           E  +  +RVNCI+P G  T+M  +A+
Sbjct: 182 EYQQR-LRVNCINPGGTRTAMRASAF 206

>pdb|3KSU|A Chain A, Crystal Structure Of Short-Chain Dehydrogenase From Oenococcus Oeni Psu-1 Length = 262

Iteration: 1
 Score = 72.0 bits (175), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 75/281 (26%), Positives = 118/281 (41%), Gaps = 41/281 (14%)
Query: 26  HRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVI-------ADVEDTLGSVLASTLAPA 78
           +  L+ KV +I GG + +G    + FA     +V+       +D  + L   L      A
Sbjct: 6   YHDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELED--QGA 63
Query: 79  PVTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAG-VLGNQRKHKSIIDFDADEFDNV 137
            V     D+S EE++  L +     +G++DI  N  G VL      K I++    EFD +
Sbjct: 64  KVALYQSDLSNEEEVAKLFDFAEKEFGKVDIAINTVGKVL-----KKPIVETSEAEFDAM 118
Query: 138 MRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAA 197
             +N K     IK AA+ M   G    I+T+ +A   G      Y  +K  +   T+ A+
Sbjct: 119 DTINNKVAYFFIKQAAKHMNPNGHIITIATSLLAAYTGFYS--TYAGNKAPVEHYTRAAS 176
Query: 198 CELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGL 257
            EL +  I VN I+P  + TS           G+E  E   F   SQ            +
Sbjct: 177 KELMKQQISVNAIAPGPMDTSFFY--------GQETKESTAFH-KSQ-----------AM 216
Query: 258 GNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT 298
           GN      + +DIA    +L +D   +++G  +  +GG TT
Sbjct: 217 GN---QLTKIEDIAPIIKFLTTD-GWWINGQTIFANGGYTT 253

>pdb|3IMF|A Chain A, 1.99 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' Length = 257

Iteration: 1
 Score = 72.0 bits (175), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 83/268 (30%), Positives = 118/268 (44%), Gaps = 29/268 (10%)
Query: 32  KVAIITGGARGIGEAAVRLFARHGAKVVIA--DVEDTLGSVLASTLAPAPVTFVHCDVSL 89
           KV IITGG+ G G+     FA+ GA+VVI     E    + L     P  +  V  DV  
Sbjct: 7   KVVIITGGSSGXGKGXATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQXDVRN 66
Query: 90  EEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGI 149
            +DI+  I     ++GR+DIL NNA   GN        D   + +++V+ + + G     
Sbjct: 67  TDDIQKXIEQIDEKFGRIDILINNAA--GNFICPAE--DLSVNGWNSVINIVLNGTFYCS 122
Query: 150 KHAARVMINRG-GGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGR-YGIRV 207
           +   +  I +G  G II+  +      G G     A+K  ++  TK  A E GR YGIRV
Sbjct: 123 QAIGKYWIEKGIKGNIINXVATYAWDAGPGVIHSAAAKAGVLAXTKTLAVEWGRKYGIRV 182
Query: 208 NCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRS 267
           N I+P               G  E         I  +   R ++     LG L GT    
Sbjct: 183 NAIAP---------------GPIERTGGADKLWISEEXAKRTIQSV--PLGRL-GT---P 221
Query: 268 KDIAEAALYLASDESRYVSGHNLVVDGG 295
           ++IA  A YL SDE+ Y++G     DGG
Sbjct: 222 EEIAGLAYYLCSDEAAYINGTCXTXDGG 249

>pdb|3F5S|A Chain A, Crystal Structure Of Putatitve Short Chain Dehydrogenase From Shigella Flexneri 2a Str. 301 Length = 255

Iteration: 1
 Score = 72.0 bits (175), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 98/201 (48%), Gaps = 9/201 (4%)
Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVV-IADVEDTLGSV---LASTLAPAPVTFV- 83
           L  ++ ++TG + GIG  A   +AR+GA V+ +   E+ L  V   +       P  F+ 
Sbjct: 8   LNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFIL 67
Query: 84  HCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVK 143
                  E+ + L    V  Y RLD + +NAG+LG+      + + +   + +VM++NV 
Sbjct: 68  DLLTCTSENCQQLAQRIVVNYPRLDGVLHNAGLLGD---VCPMSEQNPQVWQDVMQINVN 124
Query: 144 GMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRY 203
              +  +    +++    G ++ T+S  G  G     AY ASK A  G+ +  A E  + 
Sbjct: 125 ATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLADEYQQR 184
Query: 204 GIRVNCISPFGVATSMLVNAW 224
            +RVNCI+P G  T+M  +A+
Sbjct: 185 -LRVNCINPGGTRTAMRASAF 204

>pdb|1PR9|A Chain A, Human L-Xylulose Reductase Holoenzyme Length = 244

Iteration: 1
 Score = 71.6 bits (174), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 77/269 (28%), Positives = 116/269 (43%), Gaps = 35/269 (13%)
Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVV-IADVEDTLGSVLASTLAPAPVTFVHCDV 87
           L G+  ++TG  +GIG   V+     GA+VV ++  +  L S++       PV     D+
Sbjct: 5   LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCV---DL 61
Query: 88  SLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMAL 147
              E  E  + S     G +D+L NNA V   Q      ++   + FD    VN++ +  
Sbjct: 62  GDWEATERALGSV----GPVDLLVNNAAVALLQ----PFLEVTKEAFDRSFEVNLRAVIQ 113
Query: 148 GIKHAARVMINRG-GGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIR 206
             +  AR +I RG  G I++ +S            Y ++K A+  LTK  A ELG + IR
Sbjct: 114 VSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIR 173
Query: 207 VNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLR 266
           VN ++P  V TSM    W    D  +    +N  IP              LG        
Sbjct: 174 VNAVNPTVVMTSMGQATW---SDPHKAKTMLN-RIP--------------LGKFA----E 211
Query: 267 SKDIAEAALYLASDESRYVSGHNLVVDGG 295
            + +  A L+L SD S   +G  L V+GG
Sbjct: 212 VEHVVNAILFLLSDRSGMTTGSTLPVEGG 240

>pdb|4ESO|A Chain A, Crystal Structure Of A Putative Oxidoreductase Protein From Sinorhizobium Meliloti 1021 In Complex With Nadp Length = 255

Iteration: 1
 Score = 71.2 bits (173), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 77/270 (28%), Positives = 118/270 (43%), Gaps = 32/270 (11%)
Query: 30  EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSL 89
           +GK AI+ GG  G G A VR     GA+V++    ++  + +     P  V  +  D++ 
Sbjct: 7   QGKKAIVIGGTHGXGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPR-VHALRSDIAD 65
Query: 90  EEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDA---DEFDNVMRVNVKGMA 146
             +I  L  +     G +D+L+ NAGV         +  FD      +D    VN KG  
Sbjct: 66  LNEIAVLGAAAGQTLGAIDLLHINAGV-------SELEPFDQVSEASYDRQFAVNTKGAF 118
Query: 147 LGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIR 206
             ++    ++  R GG I+ T+SVA   G  G   Y+ASK A+V      A EL   GIR
Sbjct: 119 FTVQRLTPLI--REGGSIVFTSSVADEGGHPGXSVYSASKAALVSFASVLAAELLPRGIR 176
Query: 207 VNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLR 266
           VN +SP  + T     A     +  E     +   P ++                GT   
Sbjct: 177 VNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPXKR---------------NGT--- 218
Query: 267 SKDIAEAALYLASDESRYVSGHNLVVDGGV 296
           + ++A A L+LA  E+ + +G  L VDGG+
Sbjct: 219 ADEVARAVLFLAF-EATFTTGAKLAVDGGL 247

>pdb|3VC7|A Chain A, Crystal Structure Of A Putative Oxidoreductase From Sinorhizobium Meliloti 1021 Length = 254

Iteration: 1
 Score = 71.2 bits (173), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 77/270 (28%), Positives = 118/270 (43%), Gaps = 32/270 (11%)
Query: 30  EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSL 89
           +GK AI+ GG  G G A VR     GA+V++    ++  + +     P  V  +  D++ 
Sbjct: 6   QGKKAIVIGGTHGXGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPR-VHALRSDIAD 64
Query: 90  EEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDA---DEFDNVMRVNVKGMA 146
             +I  L  +     G +D+L+ NAGV         +  FD      +D    VN KG  
Sbjct: 65  LNEIAVLGAAAGQTLGAIDLLHINAGV-------SELEPFDQVSEASYDRQFAVNTKGAF 117
Query: 147 LGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIR 206
             ++    ++  R GG I+ T+SVA   G  G   Y+ASK A+V      A EL   GIR
Sbjct: 118 FTVQRLTPLI--REGGSIVFTSSVADEGGHPGXSVYSASKAALVSFASVLAAELLPRGIR 175
Query: 207 VNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLR 266
           VN +SP  + T     A     +  E     +   P ++                GT   
Sbjct: 176 VNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPXKR---------------NGT--- 217
Query: 267 SKDIAEAALYLASDESRYVSGHNLVVDGGV 296
           + ++A A L+LA  E+ + +G  L VDGG+
Sbjct: 218 ADEVARAVLFLAF-EATFTTGAKLAVDGGL 246

>pdb|3D3W|A Chain A, Structure Of L-Xylulose Reductase With Bound Coenzyme, Phosphate And Hydroxide Length = 244

Iteration: 1
 Score = 71.2 bits (173), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 77/269 (28%), Positives = 116/269 (43%), Gaps = 35/269 (13%)
Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVV-IADVEDTLGSVLASTLAPAPVTFVHCDV 87
           L G+  ++TG  +GIG   V+     GA+VV ++  +  L S++       PV     D+
Sbjct: 5   LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCV---DL 61
Query: 88  SLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMAL 147
              E  E  + S     G +D+L NNA V   Q      ++   + FD    VN++ +  
Sbjct: 62  GDWEATERALGSV----GPVDLLVNNAAVALLQ----PFLEVTKEAFDRSFEVNLRAVIQ 113
Query: 148 GIKHAARVMINRG-GGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIR 206
             +  AR +I RG  G I++ +S            Y ++K A+  LTK  A ELG + IR
Sbjct: 114 VSQIVARGLIARGVPGAIVNVSSQXSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIR 173
Query: 207 VNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLR 266
           VN ++P  V TSM    W    D  +    +N  IP              LG        
Sbjct: 174 VNAVNPTVVMTSMGQATW---SDPHKAKTMLN-RIP--------------LGKFA----E 211
Query: 267 SKDIAEAALYLASDESRYVSGHNLVVDGG 295
            + +  A L+L SD S   +G  L V+GG
Sbjct: 212 VEHVVNAILFLLSDRSGMTTGSTLPVEGG 240

>pdb|3GED|A Chain A, Fingerprint And Structural Analysis Of A Apo Scor Enzyme From Clostridium Thermocellum Length = 247

Iteration: 1
 Score = 70.9 bits (172), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 68/266 (25%), Positives = 113/266 (42%), Gaps = 44/266 (16%)
Query: 35  IITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIE 94
           I+TGG  GIG+     F   G KV   D+++   +  A       + + H DV+    ++
Sbjct: 6   IVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKE--RPNLFYFHGDVADPLTLK 63
Query: 95  NLINSTVSRYGRLDILYNNAGVLGNQRKHKSII-DFDADEFDNVMRVNVKGMALGIKHAA 153
             +   + +  R+D+L NNA      R  K I+     +EFD ++ V +K     +    
Sbjct: 64  KFVEYAMEKLQRIDVLVNNAC-----RGSKGILSSLLYEEFDYILSVGLKA-PYELSRLC 117
Query: 154 RVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPF 213
           R  + +  G II+ AS           AY ++K  IV LT   A  LG   + VNCI+P 
Sbjct: 118 RDELIKNKGRIINIASTRAFQSEPDSEAYASAKGGIVALTHALAMSLGP-DVLVNCIAP- 175
Query: 214 GVATSMLVNAWRNSGDGEE--EDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSKDIA 271
                     W N  + +E  +++C    IP+                  G     KDI+
Sbjct: 176 ---------GWINVTEQQEFTQEDCA--AIPA------------------GKVGTPKDIS 206
Query: 272 EAALYLASDESRYVSGHNLVVDGGVT 297
              L+L   +  +++G  ++VDGG++
Sbjct: 207 NMVLFLCQQD--FITGETIIVDGGMS 230

>pdb|1UZL|A Chain A, Maba From Mycobacterium Tuberculosis Length = 247

Iteration: 1
 Score = 70.5 bits (171), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 67/263 (25%), Positives = 121/263 (46%), Gaps = 39/263 (14%)
Query: 35  IITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIE 94
           ++TGG RGIG A  +  A  G KV +             + AP  +  V CDV+  + ++
Sbjct: 19  LVTGGNRGIGLAIAQRLAADGHKVAVTH---------RGSGAPKGLFGVECDVTDSDAVD 69
Query: 95  NLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAAR 154
               +     G +++L +NAG+  +      ++    ++F+ V+  N+ G     + A+R
Sbjct: 70  RAFTAVEEHQGPVEVLVSNAGLSAD----AFLMRMTEEKFEKVINANLTGAFRVAQRASR 125
Query: 155 VMINRGGGCIISTASVAGVMGGLGPHA-YTASKHAIVGLTKNAACELGRYGIRVNCISPF 213
            M     G +I   SV+G  G +G  A Y ASK  ++G+ ++ A EL +  +  N ++P 
Sbjct: 126 SMQRNKFGRMIFIGSVSGSWG-IGNQANYAASKAGVIGMARSIARELSKANVTANVVAPG 184
Query: 214 GVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSKDIAEA 273
            + T M       + D   +   + F IP+++                GT     ++A  
Sbjct: 185 YIDTDMT-----RALDERIQQGALQF-IPAKR---------------VGT---PAEVAGV 220
Query: 274 ALYLASDESRYVSGHNLVVDGGV 296
             +LAS+++ Y+SG  + VDGG+
Sbjct: 221 VSFLASEDASYISGAVIPVDGGM 243

>pdb|3EDM|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Agrobacterium Tumefaciens Length = 259

Iteration: 1
 Score = 70.1 bits (170), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 83/289 (28%), Positives = 130/289 (44%), Gaps = 53/289 (18%)
Query: 25  SHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIA-------------DVEDTLGSVL 71
           S +R   +  ++ G  R IG A    FA+ GA VV+              ++E    S L
Sbjct: 2   SLQRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSAL 61
Query: 72  ASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDA 131
           A          +  D++   ++E  I++   ++G +  L + AG L      K+I + D 
Sbjct: 62  A----------IKADLTNAAEVEAAISAAADKFGEIHGLVHVAGGL---IARKTIAEMDE 108
Query: 132 DEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGV-MGGLGPHAYTASKHAIV 190
             +  V+ VN+  + L  K A   M    GG I++ +S AG   GG G  AY  SK A++
Sbjct: 109 AFWHQVLDVNLTSLFLTAKTALPKMAK--GGAIVTFSSQAGRDGGGPGALAYATSKGAVM 166
Query: 191 GLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKM 250
             T+  A E+G   IRVN + P      M+   + ++           F  P   EVR  
Sbjct: 167 TFTRGLAKEVGPK-IRVNAVCP-----GMISTTFHDT-----------FTKP---EVR-- 204
Query: 251 EEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTS 299
            E V+G  +LK     S+D+A    +LASD++ YV+G    ++GGV  S
Sbjct: 205 -ERVAGATSLKREG-SSEDVAGLVAFLASDDAAYVTGACYDINGGVLFS 251

>pdb|3ICC|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis At 1.87 A Resolution Length = 255

Iteration: 1
 Score = 70.1 bits (170), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 81/281 (28%), Positives = 123/281 (43%), Gaps = 47/281 (16%)
Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVI------ADVEDTLGSVLASTLAP----A 78
           L+GKVA++TG +RGIG A  +  A  GA V I       + E+T+  + ++  +     A
Sbjct: 5   LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGA 64
Query: 79  PVTFVH----CDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEF 134
            +  +H       SL+ +++N   ST     + DIL NNAG+       ++   F    F
Sbjct: 65  NLESLHGVEALYSSLDNELQNRTGST-----KFDILINNAGIGPGAFIEETTEQF----F 115
Query: 135 DNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTK 194
           D  + VN K     I+ A   +  R    II+ +S A  +      AY+ +K AI   T 
Sbjct: 116 DRXVSVNAKAPFFIIQQALSRL--RDNSRIINISSAATRISLPDFIAYSXTKGAINTXTF 173
Query: 195 NAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFV 254
             A +LG  GI VN I P  V T                    N  + S    ++    +
Sbjct: 174 TLAKQLGARGITVNAILPGFVKTD------------------XNAELLSDPXXKQYATTI 215
Query: 255 SGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
           S    L       +DIA+ A +LAS +SR+V+G  + V GG
Sbjct: 216 SAFNRLG----EVEDIADTAAFLASPDSRWVTGQLIDVSGG 252

>pdb|2NTN|A Chain A, Crystal Structure Of Maba-c60v/g139a/s144l Length = 267

Iteration: 1
 Score = 69.7 bits (169), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/263 (25%), Positives = 122/263 (46%), Gaps = 39/263 (14%)
Query: 35  IITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIE 94
           ++TGG RGIG A  +  A  G KV +             + AP  +  V  DV+  + ++
Sbjct: 39  LVTGGNRGIGLAIAQRLAADGHKVAVTH---------RGSGAPKGLFGVEVDVTDSDAVD 89
Query: 95  NLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAAR 154
               +     G +++L +NAG+  +      ++    ++F+ V+  N+ G     + A+R
Sbjct: 90  RAFTAVEEHQGPVEVLVSNAGLSAD----AFLMRMTEEKFEKVINANLTGAFRVAQRASR 145
Query: 155 VMINRGGGCIISTASVAGVMGGLGPHA-YTASKHAIVGLTKNAACELGRYGIRVNCISPF 213
            M     G +I  ASV+G+ G +G  A Y ASK  ++G+ ++ A EL +  +  N ++P 
Sbjct: 146 SMQRNKFGRMIFIASVSGLWG-IGNQANYAASKAGVIGMARSIARELSKANVTANVVAPG 204
Query: 214 GVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSKDIAEA 273
            + T M       + D   +   + F IP+++                GT     ++A  
Sbjct: 205 YIDTDMT-----RALDERIQQGALQF-IPAKR---------------VGT---PAEVAGV 240
Query: 274 ALYLASDESRYVSGHNLVVDGGV 296
             +LAS+++ Y+SG  + VDGG+
Sbjct: 241 VSFLASEDASYISGAVIPVDGGM 263

>pdb|3ASU|A Chain A, Crystal Structure Of Serine Dehydrogenase From Escherichia Coli Length = 248

Iteration: 1
 Score = 69.3 bits (168), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 61/234 (26%), Positives = 102/234 (43%), Gaps = 22/234 (9%)
Query: 33  VAIITGGARGIGEAAVRLFARHGAKVV--------IADVEDTLGSVLASTLAPAPVTFVH 84
           + ++TG   G GE   R F + G KV+        + +++D LG  L             
Sbjct: 2   IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLY---------IAQ 52
Query: 85  CDVSLEEDIENLINSTVSRYGRLDILYNNAGV-LGNQRKHKSIIDFDADEFDNVMRVNVK 143
            DV     IE ++ S  + +  +DIL NNAG+ LG +  HK+ ++    +++ ++  N K
Sbjct: 53  LDVRNRAAIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVE----DWETMIDTNNK 108
Query: 144 GMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRY 203
           G+    +     M+ R  G II+  S AG     G + Y A+K  +   + N   +L   
Sbjct: 109 GLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGT 168
Query: 204 GIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGL 257
            +RV  I P  V  +   N      DG+ E    N    + ++V +   +VS L
Sbjct: 169 AVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTYQNTVALTPEDVSEAVWWVSTL 222

>pdb|3IAH|A Chain A, Crystal Structure Of Short Chain Dehydrogenase (ycik) From Salmonella Enterica Subsp. Enterica Serovar Typhimurium Str. Lt2 In Complex With Nadp And Acetate. Length = 256

Iteration: 1
 Score = 68.9 bits (167), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 94/206 (45%), Gaps = 8/206 (3%)
Query: 24  PSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVI-ADVEDTLGSV---LASTLAPAP 79
           P    L+ ++ ++TG + GIG  A   +AR+GA V++    E+ L  V   +A      P
Sbjct: 8   PKQDLLQNRIILVTGASDGIGREAALTYARYGATVILLGRNEEKLRRVAQHIADEQHVQP 67
Query: 80  VTF-VHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVM 138
             F +       E+   + +   + Y RLD + +NAG+LG   +     + D   + +V 
Sbjct: 68  QWFTLDLLTCTAEECRQVADRIAAHYPRLDGVLHNAGLLG---EIGPXSEQDPQIWQDVX 124
Query: 139 RVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAAC 198
           +VNV       +    +++    G ++ T+S  G  G     AY  SK A  G  +  A 
Sbjct: 125 QVNVNATFXLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYATSKFATEGXXQVLAD 184
Query: 199 ELGRYGIRVNCISPFGVATSMLVNAW 224
           E     +RVNCI+P G  TS   +A+
Sbjct: 185 EYQNRSLRVNCINPGGTRTSXRASAF 210

>pdb|3AFM|A Chain A, Crystal Structure Of Aldose Reductase A1-R Responsible For Alginate Metabolism Length = 258

Iteration: 1
 Score = 68.9 bits (167), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 83/280 (29%), Positives = 134/280 (47%), Gaps = 43/280 (15%)
Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVI------ADVEDTLGSVLASTLAPAPVTF 82
           L+GK  +ITG ++GIG A  RLFAR GAKV +      A++++T+ S+ A         F
Sbjct: 5   LKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADG---GDAAF 61
Query: 83  VHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNV 142
              D++  E  + L++  V+++G +D+L NNAG L  +   K + + D   +D VM  N+
Sbjct: 62  FAADLATSEACQQLVDEFVAKFGGIDVLINNAGGLVGR---KPLPEIDDTFYDAVMDANI 118
Query: 143 KGMALGIKH-----AARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIV-GLTKNA 196
           + + +  K      AA    +     +IST S+AG  GG        +  A +  + KN 
Sbjct: 119 RSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGPGAGLYGAAKAFLHNVHKNW 178
Query: 197 ACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSG 256
                + G+R N +SP  V T+   +  +     +  D   N GIP       M  F   
Sbjct: 179 VDFHTKDGVRFNIVSPGTVDTAFHADKTQ-----DVRDRISN-GIP-------MGRF--- 222
Query: 257 LGNLKGTTLRSKDIAEAALYLASD-ESRYVSGHNLVVDGG 295
                GT   ++++A A L+ AS   S Y++G  L ++GG
Sbjct: 223 -----GT---AEEMAPAFLFFASHLASGYITGQVLDINGG 254

>pdb|3P19|A Chain A, Improved Nadph-Dependent Blue Fluorescent Protein Length = 266

Iteration: 1
 Score = 67.8 bits (164), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 94/209 (44%), Gaps = 27/209 (12%)
Query: 32  KVAIITGGARGIGEAAVRLFARHGAKVVIA--DVEDTLGSVLASTLAPAPVTFVHCDVSL 89
           K+ +ITG + GIGEA  R F+  G  +++    VE      L +TL          DV+ 
Sbjct: 17  KLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALNLPNTLC------AQVDVTD 70
Query: 90  EEDIENLINSTVSRYGRLDILYNNAG--VLGNQRKHKSIIDFDADEFDNVMRVNVKGMAL 147
           +   +  I      YG  D + NNAG  +LG       I   +A+E+  +  VNV G+  
Sbjct: 71  KYTFDTAITRAEKIYGPADAIVNNAGMMLLGQ------IDTQEANEWQRMFDVNVLGLLN 124
Query: 148 GIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRV 207
           G++     M  R  G II+ +S+AG        AY  +K A+  +++N   E+    +RV
Sbjct: 125 GMQAVLAPMKARNCGTIINISSIAGKKTFPDHAAYCGTKFAVHAISENVREEVAASNVRV 184
Query: 208 NCISPFGVATSML-----------VNAWR 225
             I+P  V T +L            +AWR
Sbjct: 185 MTIAPSAVKTELLSHTTSQQIKDGYDAWR 213

>pdb|1UZM|A Chain A, Maba From Mycobacterium Tuberculosis Length = 247

Iteration: 1
 Score = 67.8 bits (164), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 66/263 (25%), Positives = 121/263 (46%), Gaps = 39/263 (14%)
Query: 35  IITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIE 94
           ++TGG RGIG A  +  A  G KV +             + AP  +  V  DV+  + ++
Sbjct: 19  LVTGGNRGIGLAIAQRLAADGHKVAVTH---------RGSGAPKGLFGVEVDVTDSDAVD 69
Query: 95  NLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAAR 154
               +     G +++L +NAG+  +      ++    ++F+ V+  N+ G     + A+R
Sbjct: 70  RAFTAVEEHQGPVEVLVSNAGLSAD----AFLMRMTEEKFEKVINANLTGAFRVAQRASR 125
Query: 155 VMINRGGGCIISTASVAGVMGGLGPHA-YTASKHAIVGLTKNAACELGRYGIRVNCISPF 213
            M     G +I   SV+G+ G +G  A Y ASK  ++G+ ++ A EL +  +  N ++P 
Sbjct: 126 SMQRNKFGRMIFIGSVSGLWG-IGNQANYAASKAGVIGMARSIARELSKANVTANVVAPG 184
Query: 214 GVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSKDIAEA 273
            + T M       + D   +   + F IP+++                GT     ++A  
Sbjct: 185 YIDTDMT-----RALDERIQQGALQF-IPAKR---------------VGT---PAEVAGV 220
Query: 274 ALYLASDESRYVSGHNLVVDGGV 296
             +LAS+++ Y+SG  + VDGG+
Sbjct: 221 VSFLASEDASYISGAVIPVDGGM 243

>pdb|1YB1|A Chain A, Crystal Structure Of Human 17-Beta-Hydroxysteroid Dehydrogenase Type Xi Length = 272

Iteration: 1
 Score = 67.4 bits (163), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 63/224 (28%), Positives = 92/224 (41%), Gaps = 15/224 (6%)
Query: 23  PPSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADV-----EDTLGSVLASTLAP 77
           P   + + G++ +ITG   GIG      FA+  +K+V+ D+     E+T        L  
Sbjct: 23  PKRRKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAK--CKGLGA 80
Query: 78  APVTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNV 137
              TFV  D S  EDI +      +  G + IL NNAGV+        +      + +  
Sbjct: 81  KVHTFV-VDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTS----DLFATQDPQIEKT 135
Query: 138 MRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAA 197
             VNV       K     M     G I++ AS AG +      AY +SK A VG  K   
Sbjct: 136 FEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLT 195
Query: 198 CELGRY---GIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMN 238
            EL      G++  C+ P  V T  + N   + G   E +E +N
Sbjct: 196 DELAALQITGVKTTCLCPNFVNTGFIKNPSTSLGPTLEPEEVVN 239

>pdb|3TFO|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Carrier-Protein) Reductase From Sinorhizobium Meliloti Length = 264

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 90/201 (44%), Gaps = 29/201 (14%)
Query: 32  KVAIITGGARGIGEAAVRLFARHGAKVVI------------ADVEDTLGSVLASTLAPAP 79
           KV +ITG + GIGE   R     GAK+++             ++ D  G+ LA  L    
Sbjct: 5   KVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVL---- 60
Query: 80  VTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMR 139
                 DV+    +     + V  +GR+D+L NNAGV+        +     DE++ ++ 
Sbjct: 61  ------DVTDRHSVAAFAQAAVDTWGRIDVLVNNAGVM----PLSPLAAVKVDEWERMID 110
Query: 140 VNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACE 199
           VN+KG+  GI     +M  +  G II+  S+  +        Y A+K A+  ++     E
Sbjct: 111 VNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSVVPTAAVYCATKFAVRAISDGLRQE 170
Query: 200 LGRYGIRVNCISPFGVATSML 220
                IRV C++P GV  S L
Sbjct: 171 --STNIRVTCVNP-GVVESEL 188

>pdb|3F1K|A Chain A, Crystal Structure Of Ycik From E. Coli, An Oxidoreductase, Complexed With Nadp+ At 2.6a Resolution Length = 252

Iteration: 1
 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 94/206 (45%), Gaps = 9/206 (4%)
Query: 24  PSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVV-IADVEDTLGSV---LASTLAPAP 79
           P    L  ++ ++TG + GIG  A   +AR+GA V+ +   E+ L  V   +       P
Sbjct: 5   PKQDLLNDRIILVTGASDGIGREAAXTYARYGATVILLGRNEEKLRQVASHINEETGRQP 64
Query: 80  VTFV-HCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVM 138
             F+        E+ + L       Y RLD + +NAG+LG+        + +   + +V 
Sbjct: 65  QWFILDLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPXS---EQNPQVWQDVX 121
Query: 139 RVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAAC 198
           +VNV       +    +++    G ++ T+S  G  G     AY ASK A  G  +  A 
Sbjct: 122 QVNVNATFXLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGXXQVLAD 181
Query: 199 ELGRYGIRVNCISPFGVATSMLVNAW 224
           E  +  +RVNCI+P G  T+M  +A+
Sbjct: 182 EYQQR-LRVNCINPGGTRTAMRASAF 206

>pdb|3U5T|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Sinorhizobium Meliloti Length = 267

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 81/273 (29%), Positives = 122/273 (44%), Gaps = 42/273 (15%)
Query: 32  KVAIITGGARGIGEAAVRLFARHGAKVVI------ADVEDTLGSVLASTLAPAPVTFVHC 85
           KVAI+TG +RGIG A     A  G  VVI      A  E+  G + A   A         
Sbjct: 28  KVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEA---AGGKALTAQA 84
Query: 86  DVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGM 145
           DVS    +  L  +    +G +D+L NNAG+        +I +     FD V+ VN+KG 
Sbjct: 85  DVSDPAAVRRLFATAEEAFGGVDVLVNNAGIX----PLTTIAETGDAVFDRVIAVNLKGT 140
Query: 146 ALGIKHAARVMINRGGGCIISTASVAGVMGGLGPH--AYTASKHAIVGLTKNAACELGRY 203
              ++ AA+ +  R GG II+ ++    +G L P    Y A+K  +   T   + EL   
Sbjct: 141 FNTLREAAQRL--RVGGRIINXST--SQVGLLHPSYGIYAAAKAGVEAXTHVLSKELRGR 196
Query: 204 GIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGT 263
            I VN ++P   AT + +       +G+ +            EVR     ++ L  L GT
Sbjct: 197 DITVNAVAPGPTATDLFL-------EGKSD------------EVRDRFAKLAPLERL-GT 236
Query: 264 TLRSKDIAEAALYLASDESRYVSGHNLVVDGGV 296
               +DIA A  +LA  +  +V+G  L  +GG+
Sbjct: 237 ---PQDIAGAVAFLAGPDGAWVNGQVLRANGGI 266

>pdb|2Z1N|A Chain A, Crystal Structure Of Ape0912 From Aeropyrum Pernix K1 Length = 260

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/271 (21%), Positives = 123/271 (45%), Gaps = 22/271 (8%)
Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVI----ADVEDTLGSVLASTLAPAPVTFVH 84
           ++GK+A++T G+ G+G A+    AR+GA++++     +  +   S +AS ++ A V  V 
Sbjct: 5   IQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVA 64
Query: 85  CDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKG 144
            D+    DI+ L        G   ++Y+  G      +    ++   +++D   R+  + 
Sbjct: 65  GDIREPGDIDRLFEKARDLGGADILVYSTGGP-----RPGRFMELGVEDWDESYRLLARS 119
Query: 145 MALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYG 204
                + AA  M+ +G G ++   SV  +            +  ++G+ +  A EL  +G
Sbjct: 120 AVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQDLALSNIMRLPVIGVVRTLALELAPHG 179
Query: 205 IRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT 264
           + VN + P  + T  + +          E+     GI  ++ ++ M   +       G  
Sbjct: 180 VTVNAVLPSLILTDRVRSL--------AEERARRSGITVEEALKSMASRIP-----MGRV 226
Query: 265 LRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
            + +++A    +LAS+++ +++G  + VDGG
Sbjct: 227 GKPEELASVVAFLASEKASFITGAVIPVDGG 257

>pdb|3E9Q|A Chain A, Crystal Structure Of The Short Chain Dehydrogenase From Shigella Flexneri Length = 273

Iteration: 1
 Score = 65.5 bits (158), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 59/219 (26%), Positives = 97/219 (44%), Gaps = 15/219 (6%)
Query: 11  LQGIHVLAWDDAPPSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVV-IADVEDTLGS 69
            QG H        P    L  ++ ++TG + GIG  A   +AR+GA V+ +   E+ L  
Sbjct: 19  FQGXHYQ------PKQDLLNDRIILVTGASDGIGREAAXTYARYGATVILLGRNEEKLRQ 72
Query: 70  V---LASTLAPAPVTFV-HCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKS 125
           V   +       P  F+        E+ + L    V  Y RLD + +NAG+LG+      
Sbjct: 73  VASHINEETGRQPQWFILDLLTCTSENCQQLAQRIVVNYPRLDGVLHNAGLLGDVCPXS- 131
Query: 126 IIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTAS 185
             + +   + +V ++NV       +    +++    G ++ T+S  G  G     AY AS
Sbjct: 132 --EQNPQVWQDVXQINVNATFXLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAAS 189
Query: 186 KHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAW 224
           K A  G  +  A E  +  +RVNCI+P G  T+   +A+
Sbjct: 190 KFATEGXXQVLADEYQQR-LRVNCINPGGTRTAXRASAF 227

>pdb|2QQ5|A Chain A, Crystal Structure Of Human Sdr Family Member 1 Length = 260

Iteration: 1
 Score = 65.1 bits (157), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 94/200 (47%), Gaps = 11/200 (5%)
Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVE-DTLGSVL--ASTLAPAPVTFVHC 85
           + G+V ++TG +RGIG        + GA V I     DTL  V   A +L    V  V C
Sbjct: 3   MNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVV-C 61
Query: 86  DVSLEEDIENLINST-VSRYGRLDILYNNA----GVLGNQRKHKSIIDFDADEFDNVMRV 140
           D S E ++ +L       + GRLD+L NNA      + N R +K+  +  A  +D++  V
Sbjct: 62  DSSQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTR-NKAFWETPASMWDDINNV 120
Query: 141 NVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACEL 200
            ++G      + AR+M+  G G I+  +S  G +  +    Y   K A   L  + A EL
Sbjct: 121 GLRGHYFCSVYGARLMVPAGQGLIVVISS-PGSLQYMFNVPYGVGKAACDKLAADCAHEL 179
Query: 201 GRYGIRVNCISPFGVATSML 220
            R+G+    + P  V T +L
Sbjct: 180 RRHGVSCVSLWPGIVQTELL 199

>pdb|2JAP|A Chain A, Clavulanic Acid Dehydrogenase: Structural And Biochemical Analysis Of The Final Step In The Biosynthesis Of The Beta- Lactamase Inhibitor Clavulanic Acid Length = 247

Iteration: 1
 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 63/190 (33%), Positives = 94/190 (49%), Gaps = 15/190 (7%)
Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVED----TLGSVLASTLAPAPVTFVH 84
           L+GKVA+ITG + GIGEA  R  A  GA V IA         LG  L  T A A V  + 
Sbjct: 5   LQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDEL--TAAGAKVHVLE 62
Query: 85  CDVSLEEDIENLINSTVSRYGRLDILYNNAGV--LGNQRKHKSIIDFDADEFDNVMRVNV 142
            DV+  + ++  + STV   G LDIL NNAG+  LG       + D D  ++  ++  N+
Sbjct: 63  LDVADRQGVDAAVASTVEALGGLDILVNNAGIMLLG------PVEDADTTDWTRMIDTNL 116
Query: 143 KGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGR 202
            G+ + +  AA   + R  G ++  +S+AG +       Y A+K  +   ++    E+  
Sbjct: 117 LGL-MYMTRAALPHLLRSKGTVVQMSSIAGRVNVRNAAVYQATKFGVNAFSETLRQEVTE 175
Query: 203 YGIRVNCISP 212
            G+RV  I P
Sbjct: 176 RGVRVVVIEP 185

>pdb|2JAH|A Chain A, Biochemical And Structural Analysis Of The Clavulanic Acid Dehydeogenase (Cad) From Streptomyces Clavuligerus Length = 247

Iteration: 1
 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 75/254 (29%), Positives = 116/254 (45%), Gaps = 38/254 (14%)
Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVED----TLGSVLASTLAPAPVTFVH 84
           L+GKVA+ITG + GIGEA  R  A  GA V IA         LG  L  T A A V  + 
Sbjct: 5   LQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDEL--TAAGAKVHVLE 62
Query: 85  CDVSLEEDIENLINSTVSRYGRLDILYNNAGV--LGNQRKHKSIIDFDADEFDNVMRVNV 142
            DV+  + ++  + STV   G LDIL NNAG+  LG       + D D  ++   +  N+
Sbjct: 63  LDVADRQGVDAAVASTVEALGGLDILVNNAGIXLLG------PVEDADTTDWTRXIDTNL 116
Query: 143 KGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGR 202
            G+    + AA   + R  G ++  +S+AG +       Y A+K  +   ++    E+  
Sbjct: 117 LGLXYXTR-AALPHLLRSKGTVVQXSSIAGRVNVRNAAVYQATKFGVNAFSETLRQEVTE 175
Query: 203 YGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKG 262
            G+RV  I P G   + L     ++   E  ++ ++       ++RK             
Sbjct: 176 RGVRVVVIEP-GTTDTELRGHITHTATKEXYEQRIS-------QIRK------------- 214
Query: 263 TTLRSKDIAEAALY 276
             L+++DIAEA  Y
Sbjct: 215 --LQAQDIAEAVRY 226

>pdb|2NWQ|A Chain A, Short Chain Dehydrogenase From Pseudomonas Aeruginosa Length = 272

Iteration: 1
 Score = 62.4 bits (150), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 60/214 (28%), Positives = 87/214 (40%), Gaps = 7/214 (3%)
Query: 35  IITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL-APAPVTFVHCDVSLEEDI 93
            ITG   G GEA  R FA  G  +V+    +     LA  L A   V  +  DV      
Sbjct: 25  FITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAX 84
Query: 94  ENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAA 153
              +++    +  L  L NNAG+       +S    D D++D  +  N+KG+    +   
Sbjct: 85  SAAVDNLPEEFATLRGLINNAGLALGTDPAQSC---DLDDWDTXVDTNIKGLLYSTRLLL 141
Query: 154 RVMINRGGGC-IISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISP 212
             +I  G G  I++  SVAG     G H Y  +K  +   + N  C+L   G+RV  + P
Sbjct: 142 PRLIAHGAGASIVNLGSVAGKWPYPGSHVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEP 201
Query: 213 FGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKE 246
            G+  S      R  GD    D+      P Q E
Sbjct: 202 -GLCESEFSLV-RFGGDQARYDKTYAGAHPIQPE 233

>pdb|3M1A|A Chain A, The Crystal Structure Of A Short-Chain Dehydrogenase From Streptomyces Avermitilis To 2a Length = 281

Iteration: 1
 Score = 62.4 bits (150), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 50/190 (26%), Positives = 91/190 (47%), Gaps = 7/190 (3%)
Query: 32  KVAIITGGARGIGEAAVRLFARHGAKVV-IADVEDTLGSVLASTLAPAPVTFVHCDVSLE 90
           KV ++TG + G G A        G  V+  A   + L  ++A+   P     +  DV+  
Sbjct: 6   KVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAY--PDRAEAISLDVTDG 63
Query: 91  EDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIK 150
           E I+ +    ++RYGR+D+L NNAG    + +  +  +    E  ++  ++V G A   +
Sbjct: 64  ERIDVVAADVLARYGRVDVLVNNAG----RTQVGAFEETTERELRDLFELHVFGPARLTR 119
Query: 151 HAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCI 210
                   RG G +++ +S  G +   G  AY+A+K A+  L++  A E+  +GI+V  +
Sbjct: 120 ALLPQXRERGSGSVVNISSFGGQLSFAGFSAYSATKAALEQLSEGLADEVAPFGIKVLIV 179
Query: 211 SPFGVATSML 220
            P    T++ 
Sbjct: 180 EPGAFRTNLF 189

>pdb|2B4Q|A Chain A, Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex Length = 276

Iteration: 1
 Score = 62.0 bits (149), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 72/274 (26%), Positives = 119/274 (43%), Gaps = 34/274 (12%)
Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL-APAPVTFVHCDV 87
           L G++A++TGG+RGIG+   +     GA+V I   +    +  A+ L A      +  D+
Sbjct: 27  LAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAIPADL 86
Query: 88  SLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMAL 147
           S E     L  +      RLDIL NNAG         ++  +    ++ VM++NV  +  
Sbjct: 87  SSEAGARRLAQALGELSARLDILVNNAGT----SWGAALESYPVSGWEKVMQLNVTSVFS 142
Query: 148 GIKHAARVMINRGGGC-----IISTASVAGVMG-GLGPHAYTASKHAIVGLTKNAACELG 201
            I+     ++ R         +I+  SVAG+   G   +AY  SK A+  L++  A EL 
Sbjct: 143 CIQQLL-PLLRRSASAENPARVINIGSVAGISAMGEQAYAYGPSKAALHQLSRMLAKELV 201
Query: 202 RYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLK 261
              I VN I+P    + M     R+  +  +  E  +  IP                   
Sbjct: 202 GEHINVNVIAPGRFPSRMT----RHIANDPQALEADSASIP------------------M 239
Query: 262 GTTLRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
           G   R +++A  A+ LA     Y++G+ + +DGG
Sbjct: 240 GRWGRPEEMAALAISLAGTAGAYMTGNVIPIDGG 273

>pdb|1O5I|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein) Reductase (Tm1169) From Thermotoga Maritima At 2.50 A Resolution Length = 249

Iteration: 1
 Score = 62.0 bits (149), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 60/263 (22%), Positives = 114/263 (43%), Gaps = 40/263 (15%)
Query: 35  IITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIE 94
           ++   +RGIG A   + ++ GA+V I    + L       L  +   +V CD  L +D++
Sbjct: 23  LVLAASRGIGRAVADVLSQEGAEVTICARNEEL-------LKRSGHRYVVCD--LRKDLD 73
Query: 95  NLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAAR 154
            L      +   +DIL  NAG      K     +   ++F   +      M   +++   
Sbjct: 74  LLFE----KVKEVDILVLNAG----GPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLP 125
Query: 155 VMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFG 214
            M  +G G I++  S + +      +   +++ A+ G  K  + E+  YGI VNC++P  
Sbjct: 126 AMKEKGWGRIVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGW 185
Query: 215 VATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSKDIAEAA 274
             T  +          EE+ + +   IP    +R+M               + ++IA   
Sbjct: 186 TETERVKELL-----SEEKKKQVESQIP----MRRMA--------------KPEEIASVV 222
Query: 275 LYLASDESRYVSGHNLVVDGGVT 297
            +L S+++ Y++G  +VVDGG++
Sbjct: 223 AFLCSEKASYLTGQTIVVDGGLS 245

>pdb|3TL3|A Chain A, Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Ulcerans Length = 257

Iteration: 1
 Score = 61.6 bits (148), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 99/217 (45%), Gaps = 33/217 (15%)
Query: 24  PSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADV--EDTLGSVLASTLAPAPVT 81
           P    +   VA++TGGA G+G A  +     GA+VV+ D+  ED +  +           
Sbjct: 2   PGSMEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDVVADLGDRA------R 55
Query: 82  FVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRK------------HKSIIDF 129
           F   DV+ E  + + ++      G L I+ N AG  GN  +             + I+D 
Sbjct: 56  FAAADVTDEAAVASALD-LAETMGTLRIVVNCAGT-GNAIRVLSRDGVFSLAAFRKIVDI 113
Query: 130 DADEFDNVMRVNVKGMA----LGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTAS 185
           +     NV+R+  + +A    +G     R       G II+TASVA   G +G  AY+AS
Sbjct: 114 NLVGSFNVLRLAAERIAKTEPVGPNAEER-------GVIINTASVAAFDGQIGQAAYSAS 166
Query: 186 KHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVN 222
           K  +VG+T   A +L  + IRV  I+P    T +L +
Sbjct: 167 KGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLAS 203

>pdb|4DYV|A Chain A, Crystal Structure Of A Short-Chain DehydrogenaseREDUCTASE SDR FROM Xanthobacter Autotrophicus Py2 Length = 272

Iteration: 1
 Score = 61.2 bits (147), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 52/175 (29%), Positives = 83/175 (47%), Gaps = 16/175 (9%)
Query: 32  KVAIITGGARGIGEAAVRLFARHGAKVVIAD-----VEDTLGSVLASTLAPAPVTFVHCD 86
           K+AI+TG   G+G A     A  G  V +A      +++T   +    L       V  D
Sbjct: 29  KIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDALC------VPTD 82
Query: 87  VSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMA 146
           V+  + +  L  +TV ++GR+D+L+NNAG        +   D    ++  V+  N+ G  
Sbjct: 83  VTDPDSVRALFTATVEKFGRVDVLFNNAGTGAPAIPXE---DLTFAQWKQVVDTNLTGPF 139
Query: 147 LGIKHAARVMINRG--GGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACE 199
           L  + A RV   +   GG II+  S++          YTA+KHAI GLTK+ + +
Sbjct: 140 LCTQEAFRVXKAQEPRGGRIINNGSISATSPRPYSAPYTATKHAITGLTKSTSLD 194

>pdb|4GKB|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase Homolog (Target Efi- 505321) From Burkholderia Multivorans, Unliganded Structure Length = 258

Iteration: 1
 Score = 61.2 bits (147), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 59/218 (27%), Positives = 92/218 (42%), Gaps = 29/218 (13%)
Query: 84  HCDVSLEEDIE--NLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDA--DEFDNVMR 139
           +  V L++D +  + +  T++ +GRLD L NNAGV          I  DA  D F   + 
Sbjct: 59  YLPVELQDDAQCRDAVAQTIATFGRLDGLVNNAGV-------NDGIGLDAGRDAFVASLE 111
Query: 140 VNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACE 199
            N+      + H     +    G I++ +S   V G      Y ASK A + LT+  A  
Sbjct: 112 RNLIHY-YAMAHYCVPHLKATRGAIVNISSKTAVTGQGNTSGYCASKGAQLALTREWAVA 170
Query: 200 LGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGN 259
           L  +G+RVN + P  V T +  N      D E +   +   +P  +     +E       
Sbjct: 171 LREHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAKVPLGRRFTTPDE------- 223
Query: 260 LKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
                     IA+ A++L S  + + +G  L VDGG T
Sbjct: 224 ----------IADTAVFLLSPRASHTTGEWLFVDGGYT 251

>pdb|3UXY|A Chain A, The Crystal Structure Of Short Chain Dehydrogenase From Rhodobacter Sphaeroides Length = 266

Iteration: 1
 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 59/202 (29%), Positives = 91/202 (45%), Gaps = 21/202 (10%)
Query: 94  ENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAA 153
           + L  +  +  GRLDI+ NNAGV+   R  ++    DAD +   + VNV+      + A 
Sbjct: 82  DGLPGAVAAGLGRLDIVVNNAGVISRGRITETT---DAD-WSLSLGVNVEAPFRICRAAI 137
Query: 154 RVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPF 213
            +    GGG I++ AS  G+  G G   Y  +K A+  LT+    +    GIR+N + P 
Sbjct: 138 PLXAAAGGGAIVNVASCWGLRPGPGHALYCLTKAALASLTQCXGXDHAPQGIRINAVCPN 197
Query: 214 GVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSKDIAEA 273
            V T  L   +               G    + V ++   V       G     +DIA+ 
Sbjct: 198 EVNTPXLRTGFAKR------------GFDPDRAVAELGRTVP-----LGRIAEPEDIADV 240
Query: 274 ALYLASDESRYVSGHNLVVDGG 295
            L+LASD +RY+ G  + V+GG
Sbjct: 241 VLFLASDAARYLCGSLVEVNGG 262

>pdb|2BD0|A Chain A, Chlorobium Tepidum Sepiapterin Reductase Complexed With Nadp And Sepiapterin Length = 244

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/200 (28%), Positives = 79/200 (39%), Gaps = 21/200 (10%)
Query: 33  VAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAP-------------AP 79
           + +ITG  +GIG A    FAR  A     D E  L  VL+S  A              A 
Sbjct: 4   ILLITGAGKGIGRAIALEFAR--AARHHPDFEPVL--VLSSRTAADLEKISLECRAEGAL 59
Query: 80  VTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMR 139
              +  D+S   D+  L    V RYG +D L NNAGV     +  ++ D   ++FD  M 
Sbjct: 60  TDTITADISDMADVRRLTTHIVERYGHIDCLVNNAGV----GRFGALSDLTEEDFDYTMN 115
Query: 140 VNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACE 199
            N+KG     +    +M  +  G I    SVA          Y  SK    GL +     
Sbjct: 116 TNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRLY 175
Query: 200 LGRYGIRVNCISPFGVATSM 219
             +  +R+  + P  V T M
Sbjct: 176 ARKCNVRITDVQPGAVYTPM 195

>pdb|1MXH|A Chain A, Crystal Structure Of Substrate Complex Of Putative Pteridine Reductase 2 (Ptr2) From Trypanosoma Cruzi Length = 276

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 86/301 (28%), Positives = 125/301 (41%), Gaps = 55/301 (18%)
Query: 25  SHRRLEGKVAIITGGARGIGEA-AVRLFARHGAKVVI--ADVEDTLGSVLASTLAPAPVT 81
           SH   E   A+ITGGAR IG + AVRL  + G +VV+     E     ++A   A    +
Sbjct: 5   SHEASECPAAVITGGARRIGHSIAVRLH-QQGFRVVVHYRHSEGAAQRLVAELNAARAGS 63
Query: 82  FVHCD------VSLEEDIENLINSTVSRYGRLDILYNNAGVL----------GNQRKHKS 125
            V C        SL +  E++I+ +   +GR D+L NNA              N      
Sbjct: 64  AVLCKGDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAK 123
Query: 126 IIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGL------GP 179
            ID    E   +   N       I+  AR     GG       SV  +   +      G 
Sbjct: 124 PIDAQVAE---LFGSNAVAPLFLIRAFARRQ-GEGGAWRSRNLSVVNLCDAMTDLPLPGF 179
Query: 180 HAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNF 239
             YT +KHA+ GLT+ AA EL    IRVN ++P     S+L  A                
Sbjct: 180 CVYTMAKHALGGLTRAAALELAPRHIRVNAVAP---GLSLLPPAMPQE------------ 224
Query: 240 GIPSQKEVRKMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTS 299
              +Q+E R+       LG  + +   +  IA+A  +L S ++ Y++G  L VDGG+  +
Sbjct: 225 ---TQEEYRRKVP----LGQSEAS---AAQIADAIAFLVSKDAGYITGTTLKVDGGLILA 274
Query: 300 R 300
           R
Sbjct: 275 R 275

>pdb|3TN7|A Chain A, Crystal Structure Of Short-Chain Alcohol Dehydrogenase From Hyperthermophilic Archaeon Thermococcus Sibiricus Complexed With 5- Hydroxy-Nadp Length = 257

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 54/180 (30%), Positives = 85/180 (47%), Gaps = 8/180 (4%)
Query: 23  PPSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVI-ADVEDTLGSVLASTLAP--AP 79
           P     LE KVA+ITG +RGIGEA  R  AR G  + + A   D L  +    +      
Sbjct: 16  PRGSHMLEMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVE 75
Query: 80  VTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMR 139
           V + H DVS  E +E      + R+G +D++  NAG LG     K + +   +EF  ++ 
Sbjct: 76  VFYHHLDVSKAESVEEFSKKVLERFGDVDVVVANAG-LGY---FKRLEELSEEEFHEMIE 131
Query: 140 VNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACE 199
           VN+ G+   +K     +   GG  +++T+ V+  +   G   Y ++K A   L +    E
Sbjct: 132 VNLLGVWRTLKAFLDSLKRTGGLALVTTSDVSARLIPYG-GGYVSTKWAARALVRTFQIE 190

>pdb|3T4X|A Chain A, Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDUCTASE FROM Bacillus Anthracis Str. Ames Ancestor Length = 267

Iteration: 1
 Score = 59.3 bits (142), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 71/283 (25%), Positives = 121/283 (42%), Gaps = 31/283 (10%)
Query: 26  HRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVI-----ADVEDTLGSVLASTLAPAPV 80
           H +L+GK A++TG   GIG+A        GA V+I      +V +T+  + A     A +
Sbjct: 5   HXQLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQ-YPDAIL 63
Query: 81  TFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRV 140
             V  D+  E+  +++I     +Y ++DIL NN G+     +     D   +++  +  V
Sbjct: 64  QPVVADLGTEQGCQDVIE----KYPKVDILINNLGIF----EPVEYFDIPDEDWFKLFEV 115
Query: 141 NVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACEL 200
           N+       +   +  I R  G +I  AS A +        Y+A+K   + L+++ A   
Sbjct: 116 NIXSGVRLTRSYLKKXIERKEGRVIFIASEAAIXPSQEXAHYSATKTXQLSLSRSLAELT 175
Query: 201 GRYGIRVNCISPFGVAT----SMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSG 256
               + VN I P    T    + L + + N     EE E         K   K     S 
Sbjct: 176 TGTNVTVNTIXPGSTLTEGVETXLNSLYPNEQLTIEEAE---------KRFXKENRPTSI 226
Query: 257 LGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTS 299
           +  L    +R ++IA    +L+S  S  ++G  L +DGG+  S
Sbjct: 227 IQRL----IRPEEIAHLVTFLSSPLSSAINGSALRIDGGLVRS 265

>pdb|3EZL|A Chain A, Crystal Structure Of Acetyacetyl-Coa Reductase From Burkholderia Pseudomallei 1710b Length = 256

Iteration: 1
 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 66/284 (23%), Positives = 115/284 (40%), Gaps = 57/284 (20%)
Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVS 88
           +  ++A +TGG  GIG +  +   + G +VV                +P  V ++    +
Sbjct: 11  MSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAG----------CGPNSPRRVKWLEDQKA 60
Query: 89  LEEDI-------------ENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFD 135
           L  D              +   +   +  G +D+L NNAG+  +    K       +++ 
Sbjct: 61  LGFDFYASEGNVGDWDSTKQAFDKVKAEVGEIDVLVNNAGITRDVVFRK----MTREDWQ 116
Query: 136 NVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKN 195
            V+  N+  +    K     M+ RG G II+ +SV G  G  G   Y+ +K  I G T +
Sbjct: 117 AVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAGIHGFTMS 176
Query: 196 AACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRK--MEEF 253
            A E+   G+ VN +SP  + T M+                        K +R   +E+ 
Sbjct: 177 LAQEVATKGVTVNTVSPGYIGTDMV------------------------KAIRPDVLEKI 212
Query: 254 VSGLGNLKGTTLRSKD-IAEAALYLASDESRYVSGHNLVVDGGV 296
           V+    +    L S D I     +LAS+ES + +G +  ++GG+
Sbjct: 213 VA---TIPVRRLGSPDEIGSIVAWLASEESGFSTGADFSLNGGL 253

>pdb|3E03|A Chain A, Crystal Structure Of A Putative Dehydrogenase From Xanthomonas Campestris Length = 274

Iteration: 1
 Score = 58.9 bits (141), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 55/205 (26%), Positives = 84/205 (40%), Gaps = 15/205 (7%)
Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTF------ 82
           L GK   ITG +RGIG A     AR GA V IA         L  T+  A          
Sbjct: 4   LSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQ 63
Query: 83  ---VHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMR 139
              + CD+  E+ +   + +TV  +G +DIL NNA  +      +  +D     FD   +
Sbjct: 64  GLALKCDIREEDQVRAAVAATVDTFGGIDILVNNASAI----WLRGTLDTPXKRFDLXQQ 119
Query: 140 VNVKGMALGIKHAARVMINRGGGCIISTASVAGV-MGGLGPHA-YTASKHAIVGLTKNAA 197
           VN +G  +  +     ++      I++ A    +     G H  YT +K     +T   A
Sbjct: 120 VNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAWWGAHTGYTLAKXGXSLVTLGLA 179
Query: 198 CELGRYGIRVNCISPFGVATSMLVN 222
            E G  G+ +N + P  V  +  +N
Sbjct: 180 AEFGPQGVAINALWPRTVIATDAIN 204

>pdb|2P91|A Chain A, Crystal Structure Of Enoyl-[acyl-Carrier-Protein] Reductase (Nadh) From Aquifex Aeolicus Vf5 Length = 285

Iteration: 1
 Score = 58.9 bits (141), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 73/277 (26%), Positives = 114/277 (41%), Gaps = 40/277 (14%)
Query: 29  LEGKVAIITGGA--RGIGEAAVRLFARHGAKVVIADVEDTLGS---VLASTLAPAPVTFV 83
           LEGK A+ITG A  R I     + F R GA++        L      +A       V  V
Sbjct: 19  LEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFGSDLV--V 76
Query: 84  HCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVK 143
            CDVSL+EDI+NL       +G LDI+ ++      +     +ID   + F   M ++V 
Sbjct: 77  KCDVSLDEDIKNLKKFLEENWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVY 136
Query: 144 GMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTA--SKHAIVGLTKNAACELG 201
            +    +    +M  R G  +  T S  G    + PH      +K A+    +  A ++ 
Sbjct: 137 SLIALTRELLPLMEGRNGAIV--TLSYYGA-EKVVPHYNVMGIAKAALESTVRYLAYDIA 193
Query: 202 RYGIRVNCISPFGVATSMLVNAWRNSGDG---EEEDECMNFGIPSQKEVRKMEEFVSGLG 258
           ++G R+N IS   V T   + A+  +G     E   +   FG P   E            
Sbjct: 194 KHGHRINAISAGPVKT---LAAYSITGFHLLMEHTTKVNPFGKPITIE------------ 238
Query: 259 NLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
                     D+ + A++L SD +R ++G  + VD G
Sbjct: 239 ----------DVGDTAVFLCSDWARAITGEVVHVDNG 265

>pdb|1MXF|A Chain A, Crystal Structure Of Inhibitor Complex Of Putative Pteridine Reductase 2 (Ptr2) From Trypanosoma Cruzi Length = 276

Iteration: 1
 Score = 58.5 bits (140), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 86/301 (28%), Positives = 124/301 (41%), Gaps = 55/301 (18%)
Query: 25  SHRRLEGKVAIITGGARGIGEA-AVRLFARHGAKVVI--ADVEDTLGSVLASTLAPAPVT 81
           SH   E   A+ITGGAR IG + AVRL  + G +VV+     E     ++A   A    +
Sbjct: 5   SHEASECPAAVITGGARRIGHSIAVRLH-QQGFRVVVHYRHSEGAAQRLVAELNAARAGS 63
Query: 82  FVHCD------VSLEEDIENLINSTVSRYGRLDILYNNAGVL----------GNQRKHKS 125
            V C        SL +  E++I+ +   +GR D+L NNA              N      
Sbjct: 64  AVLCKGDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAK 123
Query: 126 IIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGL------GP 179
            ID    E   +   N       I+  AR     GG       SV  +          G 
Sbjct: 124 PIDAQVAE---LFGSNAVAPLFLIRAFARRQ-GEGGAWRSRNLSVVNLCDAXTDLPLPGF 179
Query: 180 HAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNF 239
             YT +KHA+ GLT+ AA EL    IRVN ++P     S+L  A                
Sbjct: 180 CVYTXAKHALGGLTRAAALELAPRHIRVNAVAP---GLSLLPPAXPQE------------ 224
Query: 240 GIPSQKEVRKMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTS 299
              +Q+E R+       LG  + +   +  IA+A  +L S ++ Y++G  L VDGG+  +
Sbjct: 225 ---TQEEYRRKVP----LGQSEAS---AAQIADAIAFLVSKDAGYITGTTLKVDGGLILA 274
Query: 300 R 300
           R
Sbjct: 275 R 275

>pdb|1UAY|A Chain A, Crystal Structure Of Type Ii 3-Hydroxyacyl-Coa Dehydrogenase From Thermus Thermophilus Hb8 Length = 242

Iteration: 1
 Score = 57.8 bits (138), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 54/188 (28%), Positives = 83/188 (44%), Gaps = 25/188 (13%)
Query: 80  VTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGV------LGNQRKHKSIIDFDADE 133
           + +V  DV+ EED+   + +       L  + + AGV      LG +  H        + 
Sbjct: 41  LIYVEGDVTREEDVRRAV-ARAQEEAPLFAVVSAAGVGLAEKILGKEGPH------GLES 93
Query: 134 FDNVMRVNVKGMALGIKHAARVMINRGG------GCIISTASVAGVMGGLGPHAYTASKH 187
           F  V+ VN+ G    ++ AA  M           G I++TASVA   G +G  AY ASK 
Sbjct: 94  FRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASKG 153
Query: 188 AIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEV 247
            +V LT  AA EL  +GIRV  ++P    T +L       G  E+    +   +P    +
Sbjct: 154 GVVALTLPAARELAGWGIRVVTVAPGLFDTPLL------QGLPEKAKASLAAQVPFPPRL 207
Query: 248 RKMEEFVS 255
            + EE+ +
Sbjct: 208 GRPEEYAA 215

>pdb|3L77|A Chain A, X-Ray Structure Alcohol Dehydrogenase From Archaeon Thermococcus Sibiricus Complexed With 5-Hydroxy-Nadp Length = 235

Iteration: 1
 Score = 57.8 bits (138), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 52/173 (30%), Positives = 83/173 (47%), Gaps = 8/173 (4%)
Query: 30  EGKVAIITGGARGIGEAAVRLFARHGAKVVI-ADVEDTLGSVLASTLAP--APVTFVHCD 86
           E KVA+ITG +RGIGEA  R  AR G  + + A   D L  +    +      V + H D
Sbjct: 1   EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLD 60
Query: 87  VSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMA 146
           VS  E +E      + R+G +D++  NAG LG     K + +   +EF  ++ VN+ G+ 
Sbjct: 61  VSKAESVEEFSKKVLERFGDVDVVVANAG-LGY---FKRLEELSEEEFHEMIEVNLLGVW 116
Query: 147 LGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACE 199
             +K     +   GG  +++T+ V+  +   G   Y ++K A   L +    E
Sbjct: 117 RTLKAFLDSLKRTGGLALVTTSDVSARLIPYG-GGYVSTKWAARALVRTFQIE 168

>pdb|3UCX|A Chain A, The Structure Of A Short Chain Dehydrogenase From Mycobacterium Smegmatis Length = 264

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 65/272 (23%), Positives = 117/272 (43%), Gaps = 25/272 (9%)
Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIA-----DVEDTLGSVLASTLAPAPVTFV 83
           L  KV +I+G    +G    R  A  GA +V+A      +ED    V   T        V
Sbjct: 9   LTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQV---TDTGRRALSV 65
Query: 84  HCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVK 143
             D++ +  + +L++ T+  YGR+D++ NNA  + +    K   +   +   + + + V 
Sbjct: 66  GTDITDDAQVAHLVDETMKAYGRVDVVINNAFRVPSM---KPFANTTFEHMRDAIELTVF 122
Query: 144 GMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRY 203
           G AL +       +    G +++  S+          AY  +K A++ +++  A ELG  
Sbjct: 123 G-ALRLIQGFTPALEESKGAVVNVNSMVVRHSQAKYGAYKMAKSALLAMSQTLATELGEK 181
Query: 204 GIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGT 263
           GIRVN + P  +        W  +     E +   +G  S +++       S L  L   
Sbjct: 182 GIRVNSVLPGYI--------WGGTLKSYFEHQAGKYGT-SVEDIYNAAAAGSDLKRLP-- 230
Query: 264 TLRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
                ++A A L++ASD +  ++G  L V+ G
Sbjct: 231 --TEDEVASAILFMASDLASGITGQALDVNCG 260

>pdb|3RKU|A Chain A, Substrate Fingerprint And The Structure Of Nadp+ Dependent Serine Dehydrogenase From Saccharomyces Cerevisiae Complexed With Nadp+ Length = 287

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 95/216 (43%), Gaps = 20/216 (9%)
Query: 28  RLEGKVAIITGGARGIGEAAV--RLFARHG-AKVVIA----DVEDTLGSVLASTLAPAPV 80
           RL  K  +ITG + GIG+A     L A +G  K+++A    +  + L   +      A V
Sbjct: 30  RLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKV 89
Query: 81  TFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAG-VLGNQRKHKSIIDFDADEFD-NVM 138
                D++  E I+  I +    +  +DIL NNAG  LG+ R  +   +   D FD NV 
Sbjct: 90  HVAQLDITQAEKIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVT 149
Query: 139 R-VNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAA 197
             +N+    L I  A      +  G I++  S+AG         Y ASK A+   T +  
Sbjct: 150 ALINITQAVLPIFQA------KNSGDIVNLGSIAGRDAYPTGSIYCASKFAVGAFTDSLR 203
Query: 198 CELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEE 233
            EL    IRV  I+P  V T   +  +R    G EE
Sbjct: 204 KELINTKIRVILIAPGLVETEFSLVRYR----GNEE 235

>pdb|4DRY|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Rhizobium Meliloti Length = 281

Iteration: 1
 Score = 54.7 bits (130), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 61/122 (50%), Gaps = 5/122 (4%)
Query: 80  VTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMR 139
           V  V CDV   + +  L  +  + + RLD+L NNAG   +      + +   ++++ ++ 
Sbjct: 85  VRAVVCDVGDPDQVAALFAAVRAEFARLDLLVNNAG---SNVPPVPLEEVTFEQWNGIVA 141
Query: 140 VNVKGMALGIKHAARVMINRG--GGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAA 197
            N+ G  L  +HA R    +   GG II+  S++          YTA+KHAI GLTK+ A
Sbjct: 142 ANLTGAFLCTQHAFRXXKAQTPRGGRIINNGSISAQTPRPNSAPYTATKHAITGLTKSTA 201
Query: 198 CE 199
            +
Sbjct: 202 LD 203

>pdb|1H5Q|A Chain A, Mannitol Dehydrogenase From Agaricus Bisporus Length = 265

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 73/293 (24%), Positives = 110/293 (37%), Gaps = 55/293 (18%)
Query: 22  APPSHRRLEGKVAIITGGARGIGEAAVRL----------FARHGAKVVIADVEDTLGSVL 71
           AP        K  I+TGG RGIG A  R             R  A  V  +V + +G   
Sbjct: 5   APGFTISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAV--EVTEKVGKEF 62
Query: 72  ASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDA 131
                        CDVS  + +   I    +  G +  L  NAGV       K   +   
Sbjct: 63  G-----VKTKAYQCDVSNTDIVTKTIQQIDADLGPISGLIANAGV----SVVKPATELTH 113
Query: 132 DEFDNVMRVNVKGMALGIKHAARVMINRG-GGCIISTASVAGVM-------GGLGPHAYT 183
           ++F  V  VNV G+    +  A++ + +   G I+ T+S++  +       G L    Y 
Sbjct: 114 EDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYN 173
Query: 184 ASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMN-FGIP 242
           +SK A   L K  A E    GIRVN +SP  V T    +  +   D +  +  +N F  P
Sbjct: 174 SSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDKKIRDHQASNIPLNRFAQP 233
Query: 243 SQKEVRKMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
                                    +++   A+ L SD + Y++G    +DGG
Sbjct: 234 -------------------------EEMTGQAILLLSDHATYMTGGEYFIDGG 261

>pdb|4DA9|A Chain A, Crystal Structure Of Putative Short-Chain DehydrogenaseREDUCTASE FROM Sinorhizobium Meliloti 1021 Length = 280

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 53/188 (28%), Positives = 84/188 (44%), Gaps = 12/188 (6%)
Query: 33  VAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAP-----APVTFVHCDV 87
           VAI+TGG RGIG    R  A  G  + I  + D  G  +A  +A      A V F+  D+
Sbjct: 31  VAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEG--VAPVIAELSGLGARVIFLRADL 88
Query: 88  SLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMAL 147
           +     +  +++ V+ +GR+D L NNAG+    R     +D   + FD ++ VN++G   
Sbjct: 89  ADLSSHQATVDAVVAEFGRIDCLVNNAGIASIVRDD--FLDLKPENFDTIVGVNLRGTVF 146
Query: 148 GIKHAARVMI---NRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYG 204
             +   +  +    R    II+  SV+ V        Y  SK  +   ++  A  L   G
Sbjct: 147 FTQAVLKAXLASDARASRSIINITSVSAVXTSPERLDYCXSKAGLAAFSQGLALRLAETG 206
Query: 205 IRVNCISP 212
           I V  + P
Sbjct: 207 IAVFEVRP 214

>pdb|1W6U|A Chain A, Structure Of Human Decr Ternary Complex Length = 302

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 68/277 (24%), Positives = 121/277 (43%), Gaps = 31/277 (11%)
Query: 23  PPSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTF 82
           PP+    +GKVA ITGG  G+G+    L +  GA+ VIA  +  +    A  ++      
Sbjct: 20  PPNS--FQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNK 77
Query: 83  VH---CDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMR 139
           VH   CDV   + ++N ++  +   G  +I+ NNA   GN       +  +A  +  +  
Sbjct: 78  VHAIQCDVRDPDMVQNTVSELIKVAGHPNIVINNAA--GNFISPTERLSPNA--WKTITD 133
Query: 140 VNVKGMALGIKHAARVMIN-RGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAAC 198
           + + G A       + +I  + G   +S  ++    G        ++K  +  ++K+ A 
Sbjct: 134 IVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAMSKSLAA 193
Query: 199 ELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLG 258
           E G+YG+R N I P  + T    +    +G  E+E   M   IP  +           LG
Sbjct: 194 EWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKE---MIGRIPCGR-----------LG 239
Query: 259 NLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
            +       +++A  A +L SD + +++G  +  DGG
Sbjct: 240 TV-------EELANLAAFLCSDYASWINGAVIKFDGG 269

>pdb|4EIT|A Chain A, Crystal Structure Of An Enoyl-(Acyl Carrier Protein) Reductase From Bartonella Henselae Length = 276

Iteration: 1
 Score = 51.2 bits (121), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 52/212 (24%), Positives = 85/212 (40%), Gaps = 24/212 (11%)
Query: 84  HCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVK 143
           HCDVS    I+ + N+   ++G+LD L +  G    +      +D     F     ++V 
Sbjct: 70  HCDVSDSASIDAVFNTIEKKWGKLDFLVHAIGFSDKEELSGRYVDISESNFXXTXNISVY 129
Query: 144 GMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRY 203
            +    K A ++  +  GG I++             +    +K A+    K  A +LG  
Sbjct: 130 SLTALTKRAEKLXSD--GGSILTLTYYGAEKVVPNYNVXGVAKAALEASVKYLAVDLGPK 187
Query: 204 GIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGT 263
            IRVN IS   + T                      GI   + + K  E+ + L      
Sbjct: 188 HIRVNAISAGPIKT------------------LAASGIGDFRYILKWNEYNAPLRR---- 225
Query: 264 TLRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
           T+  +++ ++ALYL SD SR V+G    VD G
Sbjct: 226 TVTIEEVGDSALYLLSDLSRSVTGEVHHVDSG 257

>pdb|3KVO|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Hydroxysteroid Dehydrogenase Like 2 (Hsdl2) Length = 346

Iteration: 1
 Score = 50.8 bits (120), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 59/136 (43%), Gaps = 13/136 (9%)
Query: 24  PSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTF- 82
           P+  RL G    ITG +RGIG+A     A+ GA +VIA         L  T+  A     
Sbjct: 38  PNTGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIE 97
Query: 83  ------VHC--DVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEF 134
                 + C  DV  E+ I   +   + ++G +DIL NNA  +       + +D      
Sbjct: 98  AVGGKALPCIVDVRDEQQISAAVEKAIKKFGGIDILVNNASAIS----LTNTLDTPTKRL 153
Query: 135 DNVMRVNVKGMALGIK 150
           D +M VN +G  L  K
Sbjct: 154 DLMMNVNTRGTYLASK 169

>pdb|3NYW|A Chain A, Crystal Structure Of A Betaketoacyl-[acp] Reductase (Fabg) From Bacteroides Thetaiotaomicron Length = 250

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 53/213 (24%), Positives = 86/213 (40%), Gaps = 12/213 (5%)
Query: 33  VAIITGGARGIGEAAVRLFARHGAKVVI-----ADVEDTLGSVLASTLAPAPVTFVHCDV 87
           +AIITG ++GIG       A  G +VV+      ++E     +  S         +  D+
Sbjct: 9   LAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIXRSNKHVQEPIVLPLDI 68
Query: 88  SLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMAL 147
           +     +  I     +YG +DIL N A    +    + +     D F  +  +NV     
Sbjct: 69  TDCTKADTEIKDIHQKYGAVDILVNAAAXFXDGSLSEPV-----DNFRKIXEINVIAQYG 123
Query: 148 GIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRV 207
            +K    +   +  G I + AS A   G      Y ++K A++GL ++   EL   GIRV
Sbjct: 124 ILKTVTEIXKVQKNGYIFNVASRAAKYGFADGGIYGSTKFALLGLAESLYRELAPLGIRV 183
Query: 208 NCISPFGVATSMLVNAWRNSGDGE--EEDECMN 238
             + P  V T     A     D E  + D+ +N
Sbjct: 184 TTLCPGWVNTDXAKKAGTPFKDEEXIQPDDLLN 216

>pdb|3GRK|A Chain A, Crystal Structure Of Short Chain Dehydrogenase Reductase Sdr Glucose-Ribitol Dehydrogenase From Brucella Melitensis Length = 293

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 66/271 (24%), Positives = 103/271 (38%), Gaps = 29/271 (10%)
Query: 29  LEGKVAIITGGA--RGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFV--H 84
           L+GK  +I G A  R I     +     GA++      D L   +   LA     FV  H
Sbjct: 29  LQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRV-EPLAEELGAFVAGH 87
Query: 85  CDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKG 144
           CDV+    I+ +  +   ++G+LD L +  G           ID     F N M ++V  
Sbjct: 88  CDVADAASIDAVFETLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYS 147
Query: 145 MALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYG 204
           +    + A ++M + G    ++      VM     +    +K A+    K  A +LG   
Sbjct: 148 LTAVSRRAEKLMADGGSILTLTYYGAEKVMPNY--NVMGVAKAALEASVKYLAVDLGPQN 205
Query: 205 IRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT 264
           IRVN IS   + T                      GI   + + K  E+ + L      T
Sbjct: 206 IRVNAISAGPIKT------------------LAASGIGDFRYILKWNEYNAPLRR----T 243
Query: 265 LRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
           +   ++ +  LY  SD SR V+G     D G
Sbjct: 244 VTIDEVGDVGLYFLSDLSRSVTGEVHHADSG 274

>pdb|1P33|A Chain A, Pteridine Reductase From Leishmania Tarentolae Complex With Nadph And Mtx Length = 289

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 68/264 (25%), Positives = 111/264 (42%), Gaps = 50/264 (18%)
Query: 54  HGAKVVIADVEDTLGSVLASTLAPAPVT-FVHCDVSLEEDIENLINSTVSRYGRLDILYN 112
           + A  V AD+ +   +  + T    PVT F  C          L+++    +GR D+L N
Sbjct: 58  NSAITVQADLSNVATASFSETDGSVPVTLFSRCSA--------LVDACYMHWGRCDVLVN 109
Query: 113 NAGVLGNQ---RKH-----KSIIDFDADEFD--NVMRVNVKGMALGIK-HAARVMINRGG 161
           NA         RK       S+ D ++ E    ++   N       IK  A RV   R  
Sbjct: 110 NASSFYPTPLLRKDAGEGGSSVGDKESLEVAAADLFGSNAIAPYFLIKAFAQRVADTRAE 169
Query: 162 --GCIISTASVAGVMGG---LGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVA 216
             G   S  ++   M     LG   YT +K A+ GLT++AA EL    IRVN +SP    
Sbjct: 170 QRGTSYSIVNMVDAMTSQPLLGYTMYTMAKEALEGLTRSAALELASLQIRVNGVSP---- 225
Query: 217 TSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSKDIAEAALY 276
                      G     D+ M F +  Q++ R+          L      ++++++  ++
Sbjct: 226 -----------GLSVLPDD-MPFSV--QEDYRRKVP-------LYQRNSSAEEVSDVVIF 264
Query: 277 LASDESRYVSGHNLVVDGGVTTSR 300
           L S +++Y++G  + VDGG + +R
Sbjct: 265 LCSPKAKYITGTCIKVDGGYSLTR 288

>pdb|4H15|A Chain A, Crystal Structure Of A Short Chain Alcohol Dehydrogenase-Related Dehydrogenase (Target Id Nysgrc-011812) From Sinorhizobium Meliloti 1021 In Space Group P21 Length = 261

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 65/271 (23%), Positives = 112/271 (41%), Gaps = 27/271 (9%)
Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVS 88
           L GK A+IT G +G G A V LF   GA+V+        G  L   L      FV  D++
Sbjct: 9   LRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEG--LPEEL------FVEADLT 60
Query: 89  LEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALG 148
            +E    +  +T  R G +D++ +   + G+            D++ N + +N+      
Sbjct: 61  TKEGCAIVAEATRQRLGGVDVIVHX--LGGSSAAGGGFSALSDDDWYNELSLNLFAAVRL 118
Query: 149 IKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGL---TKNAACELGRYGI 205
            +      + RG G ++   S+  V+    P + TA   A   L   +K  + E+   G+
Sbjct: 119 DRQLVPDXVARGSGVVVHVTSIQRVLP--LPESTTAYAAAKAALSTYSKAXSKEVSPKGV 176
Query: 206 RVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLK-GTT 264
           RV  +SP  + T   V         E   +     +   K++        GLG +  G  
Sbjct: 177 RVVRVSPGWIETEASVRL------AERLAKQAGTDLEGGKKI-----IXDGLGGIPLGRP 225
Query: 265 LRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
            + +++A    +LASD +  ++G    +DGG
Sbjct: 226 AKPEEVANLIAFLASDRAASITGAEYTIDGG 256

>pdb|1IOL|A Chain A, Estrogenic 17-beta Hydroxysteroid Dehydrogenase Complexed 17-beta- Estradiol Length = 327

Iteration: 1
 Score = 48.1 bits (113), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 93/200 (46%), Gaps = 22/200 (11%)
Query: 33  VAIITGGARGIG-EAAVRLFARHGAKV-VIADVED--TLGSVL--ASTLAPAPVTFVHCD 86
           V +ITG + GIG   AVRL +       V A + D  T G +   A  LA  P +     
Sbjct: 4   VVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLE--- 60
Query: 87  VSLEEDIENLINSTVSRY----GRLDILYNNAGV--LGNQRKHKSIIDFDADEFDNVMRV 140
            +L+ D+ +  +   +R     GR+D+L  NAG+  LG       +     D   +V+ V
Sbjct: 61  -TLQLDVRDSKSVAAARERVTEGRVDVLVCNAGLGLLG------PLEALGEDAVASVLEV 113
Query: 141 NVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACEL 200
           NV G    ++     M  RG G ++ T SV G+MG      Y ASK A+ GL ++ A  L
Sbjct: 114 NVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLL 173
Query: 201 GRYGIRVNCISPFGVATSML 220
             +G+ ++ I    V T+ +
Sbjct: 174 LPFGVHLSLIECGPVHTAFM 193

>pdb|3K2E|A Chain A, Crystal Structure Of Enoyl-(Acyl-Carrier-Protein) Reductase From Anaplasma Phagocytophilum At 1.9a Resolution Length = 296

Iteration: 1
 Score = 47.8 bits (112), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 66/272 (24%), Positives = 99/272 (36%), Gaps = 31/272 (11%)
Query: 29  LEGKVAIITGGA--RGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTF-VHC 85
           +EGK  +I G A  + +     +     GA+V +  + +T    +        V   V C
Sbjct: 28  MEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGVKLTVPC 87
Query: 86  DVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGM 145
           DVS  E ++N+       +G LD + +              +D     F   M ++    
Sbjct: 88  DVSDAESVDNMFKVLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSF 147
Query: 146 ALGIKHAARVMINRGGGCIISTASVAGVMGGLGPH--AYTASKHAIVGLTKNAACELGRY 203
                 A  +M N G    +S      V+    PH       K A+    K  A +LG+ 
Sbjct: 148 TYIASKAEPLMTNGGSILTLSYYGAEKVV----PHYNVMGVCKAALEASVKYLAVDLGKQ 203
Query: 204 GIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGT 263
            IRVN IS   V T                    + GI     +    ++ S L   + T
Sbjct: 204 QIRVNAISAGPVRT------------------LASSGISDFHYILTWNKYNSPL--RRNT 243
Query: 264 TLRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
           TL   D+  AALYL SD  R  +G  + VD G
Sbjct: 244 TL--DDVGGAALYLLSDLGRGTTGETVHVDCG 273

>pdb|1FDW|A Chain A, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 Mutant H221q Complexed With Estradiol Length = 327

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 93/200 (46%), Gaps = 22/200 (11%)
Query: 33  VAIITGGARGIG-EAAVRLFARHGAKV-VIADVED--TLGSVL--ASTLAPAPVTFVHCD 86
           V +ITG + GIG   AVRL +       V A + D  T G +   A  LA  P +     
Sbjct: 4   VVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLE--- 60
Query: 87  VSLEEDIENLINSTVSRY----GRLDILYNNAGV--LGNQRKHKSIIDFDADEFDNVMRV 140
            +L+ D+ +  +   +R     GR+D+L  NAG+  LG       +     D   +V+ V
Sbjct: 61  -TLQLDVRDSKSVAAARERVTEGRVDVLVCNAGLGLLG------PLEALGEDAVASVLDV 113
Query: 141 NVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACEL 200
           NV G    ++     M  RG G ++ T SV G+MG      Y ASK A+ GL ++ A  L
Sbjct: 114 NVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLL 173
Query: 201 GRYGIRVNCISPFGVATSML 220
             +G+ ++ I    V T+ +
Sbjct: 174 LPFGVHLSLIECGPVHTAFM 193

>pdb|1FDS|A Chain A, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 Complexed With 17- Beta-Estradiol Length = 327

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 93/200 (46%), Gaps = 22/200 (11%)
Query: 33  VAIITGGARGIG-EAAVRLFARHGAKV-VIADVED--TLGSVL--ASTLAPAPVTFVHCD 86
           V +ITG + GIG   AVRL +       V A + D  T G +   A  LA  P +     
Sbjct: 4   VVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLE--- 60
Query: 87  VSLEEDIENLINSTVSRY----GRLDILYNNAGV--LGNQRKHKSIIDFDADEFDNVMRV 140
            +L+ D+ +  +   +R     GR+D+L  NAG+  LG       +     D   +V+ V
Sbjct: 61  -TLQLDVRDSKSVAAARERVTEGRVDVLVCNAGLGLLG------PLEALGEDAVASVLDV 113
Query: 141 NVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACEL 200
           NV G    ++     M  RG G ++ T SV G+MG      Y ASK A+ GL ++ A  L
Sbjct: 114 NVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLL 173
Query: 201 GRYGIRVNCISPFGVATSML 220
             +G+ ++ I    V T+ +
Sbjct: 174 LPFGVHLSLIECGPVHTAFM 193

>pdb|1EQU|A Chain A, Type 1 17-Beta Hydroxysteroid Dehydrogenase Equilin Complexed With Nadp+ Length = 327

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 93/200 (46%), Gaps = 22/200 (11%)
Query: 33  VAIITGGARGIG-EAAVRLFARHGAKV-VIADVED--TLGSVL--ASTLAPAPVTFVHCD 86
           V +ITG + GIG   AVRL +       V A + D  T G +   A  LA  P +     
Sbjct: 4   VVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLE--- 60
Query: 87  VSLEEDIENLINSTVSRY----GRLDILYNNAGV--LGNQRKHKSIIDFDADEFDNVMRV 140
            +L+ D+ +  +   +R     GR+D+L  NAG+  LG       +     D   +V+ V
Sbjct: 61  -TLQLDVRDSKSVAAARERVTEGRVDVLVCNAGLGLLG------PLEALGEDAVASVLDV 113
Query: 141 NVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACEL 200
           NV G    ++     M  RG G ++ T SV G+MG      Y ASK A+ GL ++ A  L
Sbjct: 114 NVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLL 173
Query: 201 GRYGIRVNCISPFGVATSML 220
             +G+ ++ I    V T+ +
Sbjct: 174 LPFGVHLSLIECGPVHTAFM 193

>pdb|1FDU|A Chain A, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 Mutant H221l Complexed With Estradiol And Nadp+ Length = 327

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 93/200 (46%), Gaps = 22/200 (11%)
Query: 33  VAIITGGARGIG-EAAVRLFARHGAKV-VIADVED--TLGSVL--ASTLAPAPVTFVHCD 86
           V +ITG + GIG   AVRL +       V A + D  T G +   A  LA  P +     
Sbjct: 4   VVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLE--- 60
Query: 87  VSLEEDIENLINSTVSRY----GRLDILYNNAGV--LGNQRKHKSIIDFDADEFDNVMRV 140
            +L+ D+ +  +   +R     GR+D+L  NAG+  LG       +     D   +V+ V
Sbjct: 61  -TLQLDVRDSKSVAAARERVTEGRVDVLVCNAGLGLLG------PLEALGEDAVASVLDV 113
Query: 141 NVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACEL 200
           NV G    ++     M  RG G ++ T SV G+MG      Y ASK A+ GL ++ A  L
Sbjct: 114 NVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLL 173
Query: 201 GRYGIRVNCISPFGVATSML 220
             +G+ ++ I    V T+ +
Sbjct: 174 LPFGVHLSLIECGPVHTAFM 193

>pdb|1A27|A Chain A, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 C-Terminal Deletion Mutant Complexed With Estradiol And Nadp+ Length = 289

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 93/200 (46%), Gaps = 22/200 (11%)
Query: 33  VAIITGGARGIG-EAAVRLFARHGAKV-VIADVED--TLGSVL--ASTLAPAPVTFVHCD 86
           V +ITG + GIG   AVRL +       V A + D  T G +   A  LA  P +     
Sbjct: 4   VVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLE--- 60
Query: 87  VSLEEDIENLINSTVSRY----GRLDILYNNAGV--LGNQRKHKSIIDFDADEFDNVMRV 140
            +L+ D+ +  +   +R     GR+D+L  NAG+  LG       +     D   +V+ V
Sbjct: 61  -TLQLDVRDSKSVAAARERVTEGRVDVLVCNAGLGLLG------PLEALGEDAVASVLDV 113
Query: 141 NVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACEL 200
           NV G    ++     M  RG G ++ T SV G+MG      Y ASK A+ GL ++ A  L
Sbjct: 114 NVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLL 173
Query: 201 GRYGIRVNCISPFGVATSML 220
             +G+ ++ I    V T+ +
Sbjct: 174 LPFGVHLSLIECGPVHTAFM 193

>pdb|3G49|A Chain A, N-(Pyridin-2-Yl) Arylsulfonamide Inhibitors Of 11b-Hydroxysteroid Dehydrogenase Type 1: Discovery Of Pf-915275 Length = 277

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 54/178 (30%), Positives = 80/178 (44%), Gaps = 14/178 (7%)
Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVI-ADVEDTLGSVLASTLAPAPVTFVHCDV 87
           L+GK  I+TG ++GIG       A+ GA VV+ A  ++ L  V+A  L     +  +   
Sbjct: 9   LQGKKVIVTGASKGIGREIAYHLAKMGAHVVVTARSKEALQKVVARCLELGAASAHYIAG 68
Query: 88  SLEEDI--ENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNV---MRVNV 142
           S+E+    E  +    +  G LD+L  N  VL N+      + F   E DNV   M VN 
Sbjct: 69  SMEDMTFAEEFVAEAGNLMGGLDMLILN-HVLYNR------LTFFHGEIDNVRKSMEVNF 121
Query: 143 KGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACEL 200
               + +  AA  M+ +  G I   +SVAG +       Y+ASK A+ G       E 
Sbjct: 122 HSFVV-LSVAAMPMLMQSQGSIAVVSSVAGKITYPLIAPYSASKFALDGFFSTLRSEF 178

>pdb|1XSE|A Chain A, Crystal Structure Of Guinea Pig 11beta-Hydroxysteroid Dehydrogenase Type 1 Length = 295

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 54/178 (30%), Positives = 80/178 (44%), Gaps = 14/178 (7%)
Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVI-ADVEDTLGSVLASTLAPAPVTFVHCDV 87
           L+GK  I+TG ++GIG       A+ GA VV+ A  ++ L  V+A  L     +  +   
Sbjct: 30  LQGKKVIVTGASKGIGREIAYHLAKMGAHVVVTARSKEALQKVVARCLELGAASAHYIAG 89
Query: 88  SLEEDI--ENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNV---MRVNV 142
           S+E+    E  +    +  G LD+L  N  VL N+      + F   E DNV   M VN 
Sbjct: 90  SMEDMTFAEEFVAEAGNLMGGLDMLILNH-VLYNR------LTFFHGEIDNVRKSMEVNF 142
Query: 143 KGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACEL 200
               + +  AA  M+ +  G I   +SVAG +       Y+ASK A+ G       E 
Sbjct: 143 HSFVV-LSVAAMPMLMQSQGSIAVVSSVAGKITYPLIAPYSASKFALDGFFSTLRSEF 199

>pdb|3DWF|A Chain A, Crystal Structure Of The Guinea Pig 11beta-Hydroxysteroid Dehydrogenase Type 1 Mutant F278e Length = 276

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 54/178 (30%), Positives = 80/178 (44%), Gaps = 14/178 (7%)
Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVI-ADVEDTLGSVLASTLAPAPVTFVHCDV 87
           L+GK  I+TG ++GIG       A+ GA VV+ A  ++ L  V+A  L     +  +   
Sbjct: 9   LQGKKVIVTGASKGIGREIAYHLAKMGAHVVVTARSKEALQKVVARCLELGAASAHYIAG 68
Query: 88  SLEEDI--ENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNV---MRVNV 142
           S+E+    E  +    +  G LD+L  N  VL N+      + F   E DNV   M VN 
Sbjct: 69  SMEDMTFAEEFVAEAGNLMGGLDMLILN-HVLYNR------LTFFHGEIDNVRKSMEVNF 121
Query: 143 KGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACEL 200
               + +  AA  M+ +  G I   +SVAG +       Y+ASK A+ G       E 
Sbjct: 122 HSFVV-LSVAAMPMLMQSQGSIAVVSSVAGKITYPLIAPYSASKFALDGFFSTLRSEF 178

>pdb|1W73|A Chain A, Binary Structure Of Human Decr Solved By Semet Sad. Length = 302

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 67/277 (24%), Positives = 118/277 (42%), Gaps = 31/277 (11%)
Query: 23  PPSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTF 82
           PP+    +GKVA ITGG  G+G+    L +  GA+ VIA  +  +    A  ++      
Sbjct: 20  PPNS--FQGKVAFITGGGTGLGKGXTTLLSSLGAQCVIASRKXDVLKATAEQISSQTGNK 77
Query: 83  VH---CDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMR 139
           VH   CDV   + ++N ++  +   G  +I+ NNA   GN       +  +A  +  +  
Sbjct: 78  VHAIQCDVRDPDXVQNTVSELIKVAGHPNIVINNAA--GNFISPTERLSPNA--WKTITD 133
Query: 140 VNVKGMALGIKHAARVMIN-RGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAAC 198
           + + G A       + +I  + G   +S  ++    G        ++K  +   +K+ A 
Sbjct: 134 IVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAXSKSLAA 193
Query: 199 ELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLG 258
           E G+YG R N I P  + T    +    +G  E+E       IP  +           LG
Sbjct: 194 EWGKYGXRFNVIQPGPIKTKGAFSRLDPTGTFEKEXIGR---IPCGR-----------LG 239
Query: 259 NLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
            +       +++A  A +L SD + +++G  +  DGG
Sbjct: 240 TV-------EELANLAAFLCSDYASWINGAVIKFDGG 269

>pdb|3LZ6|A Chain A, Guinea Pig 11beta Hydroxysteroid Dehydrogenase With Pf-877423 Length = 263

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 54/178 (30%), Positives = 80/178 (44%), Gaps = 14/178 (7%)
Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVI-ADVEDTLGSVLASTLAPAPVTFVHCDV 87
           L+GK  I+TG ++GIG       A+ GA VV+ A  ++ L  V+A  L     +  +   
Sbjct: 7   LQGKKVIVTGASKGIGREIAYHLAKMGAHVVVTARSKEALQKVVARCLELGAASAHYIAG 66
Query: 88  SLEEDI--ENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNV---MRVNV 142
           S+E+    E  +    +  G LD+L  N  VL N+      + F   E DNV   M VN 
Sbjct: 67  SMEDMTFAEEFVAEAGNLMGGLDMLILN-HVLYNR------LTFFHGEIDNVRKSMEVNF 119
Query: 143 KGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACEL 200
               + +  AA  M+ +  G I   +SVAG +       Y+ASK A+ G       E 
Sbjct: 120 HSFVV-LSVAAMPMLMQSQGSIAVVSSVAGKITYPLIAPYSASKFALDGFFSTLRSEF 176

>pdb|4IMR|A Chain A, Crystal Structure Of 3-oxoacyl (acyl-carrier-protein) Reductase (target Efi-506442) From Agrobacterium Tumefaciens C58 With Nadp Bound Length = 275

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 65/269 (24%), Positives = 116/269 (43%), Gaps = 27/269 (10%)
Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHC--D 86
           L G+ A++TG +RGIG A     A  GA V++  V+    + +   +  +  T      D
Sbjct: 31  LRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGD 90
Query: 87  VSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMA 146
           +S      +LI    +    +DIL  NA    + + + ++     ++    + VN+    
Sbjct: 91  LSEAGAGTDLIERAEA-IAPVDILVINA----SAQINATLSALTPNDLAFQLAVNLGSTV 145
Query: 147 LGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIR 206
             ++ A   M+ R  G ++S  S+  +       AY A+K A   L ++ A +     + 
Sbjct: 146 DMLQSALPKMVARKWGRVVSIGSINQLRPKSVVTAYAATKAAQHNLIQSQARDFAGDNVL 205
Query: 207 VNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLR 266
           +N ++P  V T    NA R + D E  DE           VR +        N  G   R
Sbjct: 206 LNTLAPGLVDTDR--NADRRAQDPEGWDEY----------VRTL--------NWMGRAGR 245
Query: 267 SKDIAEAALYLASDESRYVSGHNLVVDGG 295
            +++  AAL+LAS+   +++G  + + GG
Sbjct: 246 PEEMVGAALFLASEACSFMTGETIFLTGG 274

>pdb|1Y5M|A Chain A, The Crystal Structure Of Murine 11b-Hydroxysteroid Dehydrogenase: An Important Therapeutic Target For Diabetes Length = 276

Iteration: 1
 Score = 45.1 bits (105), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 54/184 (29%), Positives = 78/184 (42%), Gaps = 12/184 (6%)
Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVI-ADVEDTLGSVLASTLAPAPVTFVHCDV 87
           L+GK  I+TG ++GIG       ++ GA VV+ A  E+ L  V++  L     +  H   
Sbjct: 16  LQGKKVIVTGASKGIGREMAYHLSKMGAHVVLTARSEEGLQKVVSRCLELGAAS-AHYIA 74
Query: 88  SLEEDI---ENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKG 144
              ED+   E  I       G LD+L  N       +   S+   D      VM VN   
Sbjct: 75  GTMEDMTFAEQFIVKAGKLMGGLDMLILN----HITQTSLSLFHDDIHSVRRVMEVNFLS 130
Query: 145 MALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYG 204
             + +  AA  M+ +  G I   +S+AG M       Y+ASK A+ G       EL  Y 
Sbjct: 131 YVV-MSTAALPMLKQSNGSIAVISSLAGKMTQPMIAPYSASKFALDGFFSTIRTEL--YI 187
Query: 205 IRVN 208
            +VN
Sbjct: 188 TKVN 191

>pdb|3OIF|A Chain A, Crystal Structure Of Enoyl-Acp Reductases I (Fabi) From B. Subtilis (Complex With Nad And Tcl) Length = 266

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 63/266 (23%), Positives = 110/266 (41%), Gaps = 33/266 (12%)
Query: 32  KVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEE 91
           K +I  G AR + EA  RL   +  + +   V +     LA TL       + CDV+ + 
Sbjct: 18  KRSIAWGIARSLHEAGARLIFTYAGERLEKSVHE-----LAGTLDRNDSIILPCDVTNDA 72
Query: 92  DIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRV-NVKGMAL-GI 149
           +IE    S   + G   +++  A  +    K + + ++     D  +   N+   +L  +
Sbjct: 73  EIETCFASIKEQVG---VIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAV 129
Query: 150 KHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNC 209
             AAR M+  GG  I++   + G +     +    +K ++    K  A +LG+  IRVN 
Sbjct: 130 VKAARPMMTEGG-SIVTLTYLGGELVMPNYNVMGVAKASLDASVKYLAADLGKENIRVNS 188
Query: 210 ISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSKD 269
           IS   + T         S  G  +   +   I  +  +R+              T   ++
Sbjct: 189 ISAGPIRTL--------SAKGISDFNSILKDIEERAPLRR--------------TTTPEE 226
Query: 270 IAEAALYLASDESRYVSGHNLVVDGG 295
           + + A +L SD SR ++G NL VD G
Sbjct: 227 VGDTAAFLFSDMSRGITGENLHVDSG 252

>pdb|2PD3|A Chain A, Crystal Structure Of The Helicobacter Pylori Enoyl-Acyl Carrier Protein Reductase In Complex With Hydroxydiphenyl Ether Compounds, Triclosan And Diclosan Length = 275

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/194 (22%), Positives = 83/194 (42%), Gaps = 21/194 (10%)
Query: 29  LEGKVAIITGGA--RGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVH-C 85
           L+GK  +I G A  + I     +     GA +    + ++L   +          +V+  
Sbjct: 4   LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYEL 63
Query: 86  DVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGM 145
           DVS EE  ++L NS     G LD + ++      +    S+++     F+  M ++V  +
Sbjct: 64  DVSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSL 123
Query: 146 ALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNA--------A 197
            + + +  + ++N G   +         +  LG   Y A  + ++GL K A        A
Sbjct: 124 -IELTNTLKPLLNNGASVL--------TLSYLGSTKYMA-HYNVMGLAKAALESAVRYLA 173
Query: 198 CELGRYGIRVNCIS 211
            +LG++ IRVN +S
Sbjct: 174 VDLGKHHIRVNALS 187

>pdb|3CH6|A Chain A, Crystal Structure Of 11beta-Hsd1 Double Mutant (L262r, F278e) Complexed With (3,3-Dimethylpiperidin-1-Yl)(6-(3- Fluoro-4-Methylphenyl)pyridin-2-Yl)methanone Length = 286

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/170 (28%), Positives = 76/170 (44%), Gaps = 14/170 (8%)
Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVI-ADVEDTLGSVLASTLAPAPVTFVHCDV 87
           L+GK  I+TG ++GIG       A+ GA VV+ A  ++TL  V++  L     +  H   
Sbjct: 26  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAAS-AHYIA 84
Query: 88  SLEEDI---ENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDF--DADEFDNVMRVNV 142
              ED+   E  +       G LD+L      + N   + S+  F  D       M VN 
Sbjct: 85  GTMEDMTFAEQFVAQAGKLMGGLDML------ILNHITNTSLNLFHDDIHHVRKSMEVNF 138
Query: 143 KGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGL 192
               + +  AA  M+ +  G I+  +S+AG +      AY+ASK A+ G 
Sbjct: 139 LSYVV-LTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGF 187

>pdb|2BEL|A Chain A, Structure Of Human 11-Beta-Hydroxysteroid Dehydrogenase In Complex With Nadp And Carbenoxolone Length = 283

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/170 (28%), Positives = 76/170 (44%), Gaps = 14/170 (8%)
Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVI-ADVEDTLGSVLASTLAPAPVTFVHCDV 87
           L+GK  I+TG ++GIG       A+ GA VV+ A  ++TL  V++  L     +  H   
Sbjct: 29  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAAS-AHYIA 87
Query: 88  SLEEDI---ENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDF--DADEFDNVMRVNV 142
              ED+   E  +       G LD+L      + N   + S+  F  D       M VN 
Sbjct: 88  GTMEDMTFAEQFVAQAGKLMGGLDML------ILNHITNTSLNLFHDDIHHVRKSMEVNF 141
Query: 143 KGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGL 192
               + +  AA  M+ +  G I+  +S+AG +      AY+ASK A+ G 
Sbjct: 142 LSYVV-LTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGF 190

>pdb|1MG5|A Chain A, Crystal Structure Of Drosophila Melanogaster Alcohol Dehydrogenase Complexed With Nadh And Acetate At 1.6 A Length = 255

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 55/236 (23%), Positives = 93/236 (39%), Gaps = 20/236 (8%)
Query: 29  LEGKVAIITGGARGIG-EAAVRLFARHGAKVVIAD-VEDTLGSVLASTLAP-APVTFVHC 85
           L  K  I   G  GIG + +  L  R    +VI D +E+         + P   VTF   
Sbjct: 4   LTNKNVIFVAGLGGIGLDTSKELLKRDLKNLVILDRIENPAAIAELKAINPKVTVTFYPY 63
Query: 86  DVSLE-EDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKG 144
           DV++   +   L+ +  ++   +D+L N AG+L + +  ++I             VN  G
Sbjct: 64  DVTVPIAETTKLLKTIFAQLKTVDVLINGAGILDDHQIERTI------------AVNYTG 111
Query: 145 MALGIKHAARVMINRGGG---CIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELG 201
           +             R GG    I +  SV G         Y+ +K A+V  T + A    
Sbjct: 112 LVNTTTAILDFWDKRKGGPGGIICNIGSVTGFNAIYQVPVYSGTKAAVVNFTSSLAKLAP 171
Query: 202 RYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGL 257
             G+    ++P G+  + LV+ + +  D E +        P+Q  +   E FV  +
Sbjct: 172 ITGVTAYTVNP-GITRTTLVHKFNSWLDVEPQVAEKLLAHPTQPSLACAENFVKAI 226

>pdb|3D5Q|A Chain A, Crystal Structure Of 11b-Hsd1 In Complex With Triazole Inhibitor Length = 272

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/170 (28%), Positives = 76/170 (44%), Gaps = 14/170 (8%)
Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVI-ADVEDTLGSVLASTLAPAPVTFVHCDV 87
           L+GK  I+TG ++GIG       A+ GA VV+ A  ++TL  V++  L     +  H   
Sbjct: 12  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAAS-AHYIA 70
Query: 88  SLEEDI---ENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDF--DADEFDNVMRVNV 142
              ED+   E  +       G LD+L      + N   + S+  F  D       M VN 
Sbjct: 71  GTMEDMTFAEQFVAQAGKLMGGLDML------ILNHITNTSLNLFHDDIHHVRKSMEVNF 124
Query: 143 KGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGL 192
               + +  AA  M+ +  G I+  +S+AG +      AY+ASK A+ G 
Sbjct: 125 LSYVV-LTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGF 173

>pdb|1XU7|A Chain A, Crystal Structure Of The Interface Open Conformation Of Tetrameric 11b-hsd1 Length = 286

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/170 (28%), Positives = 76/170 (44%), Gaps = 14/170 (8%)
Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVI-ADVEDTLGSVLASTLAPAPVTFVHCDV 87
           L+GK  I+TG ++GIG       A+ GA VV+ A  ++TL  V++  L     +  H   
Sbjct: 26  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAAS-AHYIA 84
Query: 88  SLEEDI---ENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDF--DADEFDNVMRVNV 142
              ED+   E  +       G LD+L      + N   + S+  F  D       M VN 
Sbjct: 85  GTMEDMTFAEQFVAQAGKLMGGLDML------ILNHITNTSLNLFHDDIHHVRKSMEVNF 138
Query: 143 KGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGL 192
               + +  AA  M+ +  G I+  +S+AG +      AY+ASK A+ G 
Sbjct: 139 LSYVV-LTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGF 187

>pdb|2ILT|A Chain A, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With Nadp And Adamantane Sulfone Inhibitor Length = 275

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/170 (28%), Positives = 76/170 (44%), Gaps = 14/170 (8%)
Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVI-ADVEDTLGSVLASTLAPAPVTFVHCDV 87
           L+GK  I+TG ++GIG       A+ GA VV+ A  ++TL  V++  L     +  H   
Sbjct: 22  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAAS-AHYIA 80
Query: 88  SLEEDI---ENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDF--DADEFDNVMRVNV 142
              ED+   E  +       G LD+L      + N   + S+  F  D       M VN 
Sbjct: 81  GTMEDMTFAEQFVAQAGKLMGGLDML------ILNHITNTSLNLFHDDIHHVRKSMEVNF 134
Query: 143 KGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGL 192
               + +  AA  M+ +  G I+  +S+AG +      AY+ASK A+ G 
Sbjct: 135 LSYVV-LTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGF 183

>pdb|4HFR|A Chain A, Human 11beta-Hydroxysteroid Dehydrogenase Type 1 In Complex With An Orally Bioavailable Acidic Inhibitor Azd4017. Length = 272

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/170 (28%), Positives = 76/170 (44%), Gaps = 14/170 (8%)
Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVI-ADVEDTLGSVLASTLAPAPVTFVHCDV 87
           L+GK  I+TG ++GIG       A+ GA VV+ A  ++TL  V++  L     +  H   
Sbjct: 12  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAAS-AHYIA 70
Query: 88  SLEEDI---ENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDF--DADEFDNVMRVNV 142
              ED+   E  +       G LD+L      + N   + S+  F  D       M VN 
Sbjct: 71  GTMEDMTFAEQFVAQAGKLMGGLDML------ILNHITNTSLNLFHDDIHHVRKSMEVNF 124
Query: 143 KGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGL 192
               + +  AA  M+ +  G I+  +S+AG +      AY+ASK A+ G 
Sbjct: 125 LSYVV-LTVAALPMLKQSNGSIVVVSSLAGKVAYPLVAAYSASKFALDGF 173

>pdb|3PDJ|A Chain A, Crystal Structure Of Human 11-Beta-Hydroxysteroid Dehydrogenase 1 (11b-Hsd1) In Complex With 4,4-Disubstituted Cyclohexylbenzamide Inhibitor Length = 273

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/170 (28%), Positives = 76/170 (44%), Gaps = 14/170 (8%)
Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVI-ADVEDTLGSVLASTLAPAPVTFVHCDV 87
           L+GK  I+TG ++GIG       A+ GA VV+ A  ++TL  V++  L     +  H   
Sbjct: 13  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAAS-AHYIA 71
Query: 88  SLEEDI---ENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDF--DADEFDNVMRVNV 142
              ED+   E  +       G LD+L      + N   + S+  F  D       M VN 
Sbjct: 72  GTMEDMTFAEQFVAQAGKLMGGLDML------ILNHITNTSLNLFHDDIHHVRKSMEVNF 125
Query: 143 KGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGL 192
               + +  AA  M+ +  G I+  +S+AG +      AY+ASK A+ G 
Sbjct: 126 LSYVV-LTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGF 174

>pdb|2IRW|A Chain A, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With Nadp And Adamantane Ether Inhibitor Length = 264

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/170 (28%), Positives = 76/170 (44%), Gaps = 14/170 (8%)
Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVI-ADVEDTLGSVLASTLAPAPVTFVHCDV 87
           L+GK  I+TG ++GIG       A+ GA VV+ A  ++TL  V++  L     +  H   
Sbjct: 7   LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAAS-AHYIA 65
Query: 88  SLEEDI---ENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDF--DADEFDNVMRVNV 142
              ED+   E  +       G LD+L      + N   + S+  F  D       M VN 
Sbjct: 66  GTMEDMTFAEQFVAQAGKLMGGLDML------ILNHITNTSLNLFHDDIHHVRKSMEVNF 119
Query: 143 KGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGL 192
               + +  AA  M+ +  G I+  +S+AG +      AY+ASK A+ G 
Sbjct: 120 LSYVV-LTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGF 168

>pdb|2QIO|A Chain A, X-Ray Structure Of Enoyl-Acyl Carrier Protein Reductase From Bacillus Anthracis With Triclosan Length = 256

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 63/272 (23%), Positives = 111/272 (40%), Gaps = 29/272 (10%)
Query: 29  LEGKVAIITGGA--RGIGEAAVRLFARHGAKVVIADVEDTLGS---VLASTLAPAPVTFV 83
           L+GK  ++ G A  R I     R     GAK++     + L      LA TL       +
Sbjct: 4   LQGKTFVVMGVANQRSIAWGIARSLHNAGAKLIFTYAGERLERNVRELADTLEGQESLVL 63
Query: 84  HCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVK 143
            CDV+ +E++     +     G +  + +              +D   D F     ++  
Sbjct: 64  PCDVTNDEELTACFETIKQEVGTIHGVAHCIAFANRDDLKGEFVDTSRDGFLLAQNISAF 123
Query: 144 GMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRY 203
            +    + A +VM    GG I++   + G       +    +K ++    K  A +LG++
Sbjct: 124 SLTAVAREAKKVMTE--GGNILTLTYLGGERVVKNYNVMGVAKASLEASVKYLANDLGQH 181
Query: 204 GIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGT 263
           GIRVN IS   + T     + +  GD                 +R++EE       L+ T
Sbjct: 182 GIRVNAISAGPIRTL----SAKGVGD-------------FNSILREIEERAP----LRRT 220
Query: 264 TLRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
           T + +++ + A++L SD +R V+G N+ VD G
Sbjct: 221 TTQ-EEVGDTAVFLFSDLARGVTGENIHVDSG 251

>pdb|4BB6|A Chain A, Free-Wilson And Structural Approaches To Co-Optimising Human And Rodent Isoform Potency For 11b-Hydroxysteroid Dehydrogenase Type 1 11b-Hsd1 Inhibitors Length = 292

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/170 (28%), Positives = 76/170 (44%), Gaps = 14/170 (8%)
Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVI-ADVEDTLGSVLASTLAPAPVTFVHCDV 87
           L+GK  I+TG ++GIG       A+ GA VV+ A  ++TL  V++  L     +  H   
Sbjct: 32  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAAS-AHYIA 90
Query: 88  SLEEDI---ENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDF--DADEFDNVMRVNV 142
              ED+   E  +       G LD+L      + N   + S+  F  D       M VN 
Sbjct: 91  GTMEDMTFAEQFVAQAGKLMGGLDML------ILNHITNTSLNLFHDDIHHVRKSMEVNF 144
Query: 143 KGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGL 192
               + +  AA  M+ +  G I+  +S+AG +      AY+ASK A+ G 
Sbjct: 145 LSYVV-LTVAALPMLKQSNGSIVVVSSLAGKVAYPLVAAYSASKFALDGF 193

>pdb|2RBE|A Chain A, The Discovery Of 2-Anilinothiazolones As 11beta-Hsd1 Inhibitors Length = 275

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/170 (28%), Positives = 76/170 (44%), Gaps = 14/170 (8%)
Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVI-ADVEDTLGSVLASTLAPAPVTFVHCDV 87
           L+GK  I+TG ++GIG       A+ GA VV+ A  ++TL  V++  L     +  H   
Sbjct: 15  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAAS-AHYIA 73
Query: 88  SLEEDI---ENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDF--DADEFDNVMRVNV 142
              ED+   E  +       G LD+L      + N   + S+  F  D       M VN 
Sbjct: 74  GTMEDMTFAEQFVAQAGKLMGGLDML------ILNHITNTSLNLFHDDIHHVRKSMEVNF 127
Query: 143 KGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGL 192
               + +  AA  M+ +  G I+  +S+AG +      AY+ASK A+ G 
Sbjct: 128 LSYVV-LTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGF 176

>pdb|3OJF|A Chain A, Crystal Structure Of The Bacillus Cereus Enoyl-Acyl Carrier Protein Reductase With Nadp+ And Indole Naphthyridinone (Complex Form) Length = 257

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 63/272 (23%), Positives = 111/272 (40%), Gaps = 29/272 (10%)
Query: 29  LEGKVAIITGGA--RGIGEAAVRLFARHGAKVVIADVEDTLGS---VLASTLAPAPVTFV 83
           L+GK  ++ G A  R I     R     GAK++     + L      LA TL       +
Sbjct: 4   LQGKTFVVMGVANQRSIAWGIARSLHNAGAKLIFTYAGERLERNVRELADTLEGQESLVL 63
Query: 84  HCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVK 143
            CDV+ +E++     +     G +  + +              +D   D F     ++  
Sbjct: 64  PCDVTNDEELTACFETIKQEVGTIHGVAHCIAFANRDDLKGEFVDTSRDGFLLAQNISAF 123
Query: 144 GMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRY 203
            +    + A +VM    GG I++   + G       +    +K ++    K  A +LG++
Sbjct: 124 SLTAVAREAKKVMTE--GGNILTLTYLGGERVVKNYNVMGVAKASLEASVKYLANDLGQH 181
Query: 204 GIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGT 263
           GIRVN IS   + T     + +  GD                 +R++EE       L+ T
Sbjct: 182 GIRVNAISAGPIRTL----SAKGVGD-------------FNSILREIEERAP----LRRT 220
Query: 264 TLRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
           T + +++ + A++L SD +R V+G N+ VD G
Sbjct: 221 TTQ-EEVGDTAVFLFSDLARGVTGENIHVDSG 251

>pdb|4BB5|A Chain A, Free-Wilson And Structural Approaches To Co-Optimising Human And Rodent Isoform Potency For 11b-Hydroxysteroid Dehydrogenase Type 1 11b-Hsd1 Inhibitors Length = 292

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/170 (28%), Positives = 76/170 (44%), Gaps = 14/170 (8%)
Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVI-ADVEDTLGSVLASTLAPAPVTFVHCDV 87
           L+GK  I+TG ++GIG       A+ GA VV+ A  ++TL  V++  L     +  H   
Sbjct: 32  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAAS-AHYIA 90
Query: 88  SLEEDI---ENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDF--DADEFDNVMRVNV 142
              ED+   E  +       G LD+L      + N   + S+  F  D       M VN 
Sbjct: 91  GTMEDMTFAEQFVAQAGKLMGGLDML------ILNHITNTSLNLFHDDIHHVRKSMEVNF 144
Query: 143 KGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGL 192
               + +  AA  M+ +  G I+  +S+AG +      AY+ASK A+ G 
Sbjct: 145 LSYVV-LTVAALPMLKQSNGSIVVVSSLAGKVAYPLVAAYSASKFALDGF 193

>pdb|2O2S|A Chain A, The Structure Of T. Gondii Enoyl Acyl Carrier Protein Reductase In Complex With Nad And Triclosan Length = 315

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/149 (28%), Positives = 68/149 (45%), Gaps = 18/149 (12%)
Query: 149 IKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELG-RYGIRV 207
           ++H   +M   G    +S  +   V+ G G    +++K A+   T+  A E G +YG+RV
Sbjct: 161 LQHFGPIMNEGGSAVTLSYLAAERVVPGYG-GGMSSAKAALESDTRTLAWEAGQKYGVRV 219
Query: 208 NCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRS 267
           N IS  G   S   +A   SG+    D  +++   +   +R+               L S
Sbjct: 220 NAISA-GPLKSRAASAIGKSGEKSFIDYAIDYSY-NNAPLRR--------------DLHS 263
Query: 268 KDIAEAALYLASDESRYVSGHNLVVDGGV 296
            D+  AAL+L S  +R VSG  L VD G+
Sbjct: 264 DDVGGAALFLLSPLARAVSGVTLYVDNGL 292

>pdb|3I1J|A Chain A, Structure Of A Putative Short Chain Dehydrogenase From Pseudomonas Syringae Length = 247

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 65/203 (32%), Positives = 95/203 (46%), Gaps = 11/203 (5%)
Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVV-IADVEDTLGSV---LASTLAPAPVTF-V 83
           L+G+V ++TG ARGIG AA R +A HGA VV +   E +L  V   + S   P P+   +
Sbjct: 12  LKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIAL 71
Query: 84  HCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVK 143
           + + +  +    L       +GRLD L +NA ++G +   + + D D   F  V  VNV 
Sbjct: 72  NLENATAQQYRELAARVEHEFGRLDGLLHNASIIGPRTPLEQLPDED---FXQVXHVNVN 128
Query: 144 GMALGIKHAARVMINRGGGCIIS-TASVAGVMGGLGPHAYTASKHAIVGLTKNAACEL-G 201
                +  A   ++ R     I+ T+S  G  G     AY  SK A  GL +  A EL G
Sbjct: 129 AT-FXLTRALLPLLKRSEDASIAFTSSSVGRKGRANWGAYGVSKFATEGLXQTLADELEG 187
Query: 202 RYGIRVNCISPFGVATSMLVNAW 224
              +R N I+P    T     A+
Sbjct: 188 VTAVRANSINPGATRTGXRAQAY 210

>pdb|3LF1|A Chain A, Apo Structure Of The Short Chain Oxidoreductase Q9hya2 From Pseudomonas Aeruginosa Pao1 Containing An Atypical Catalytic Center Length = 265

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 64/279 (22%), Positives = 108/279 (38%), Gaps = 32/279 (11%)
Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLA---PAPVTFVH- 84
           L   VA++TGG+ GIG A V L    GA V     +        S L    P    F   
Sbjct: 6   LSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASV 65
Query: 85  CDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKG 144
           CDV     +     +     G   IL NNAG        +  +   A+  D      ++ 
Sbjct: 66  CDVLDALQVRAFAEACERTLGCASILVNNAG--------QGRVSTFAETTDEAWSEELQL 117
Query: 145 MALGIKHAARVMI----NRGGGCIISTASVAGVMGGLGPH--AYTASKHAIVGLTKNAAC 198
               + H  R  +    +R    I+   S+  +     PH  A +A++  +  L ++ A 
Sbjct: 118 KFFSVIHPVRAFLPQLESRADAAIVCVNSL--LASQPEPHMVATSAARAGVKNLVRSMAF 175
Query: 199 ELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLG 258
           E    G+RVN     G+   ++ +          E+  +++   + +  R  +  +  LG
Sbjct: 176 EFAPKGVRVN-----GILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPLGRLG 230
Query: 259 NLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
                  +  + A A L+LAS  S Y +G ++ V GG++
Sbjct: 231 -------KPIEAARAILFLASPLSAYTTGSHIDVSGGLS 262

>pdb|3KZV|A Chain A, The Crystal Structure Of A Cytoplasmic Protein With Unknown Function From Saccharomyces Cerevisiae Length = 254

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 51/207 (24%), Positives = 95/207 (45%), Gaps = 23/207 (11%)
Query: 31  GKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAP---------VT 81
           GKV ++TG +RGIG++ V         V+ +  +DT+   +A + AP             
Sbjct: 2   GKVILVTGVSRGIGKSIV--------DVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFF 53
Query: 82  FVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVN 141
           +V  D++ +  ++ L+N+ V  +G++D L  NAGVL      +++ + D + +  +  +N
Sbjct: 54  YVVGDITEDSVLKQLVNAAVKGHGKIDSLVANAGVL---EPVQNVNEIDVNAWKKLYDIN 110
Query: 142 VKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELG 201
              + + +   A   + +  G ++  +S A  M      AY +SK A+       A E  
Sbjct: 111 FFSI-VSLVGIALPELKKTNGNVVFVSSDACNMYFSSWGAYGSSKAALNHFAMTLANE-- 167
Query: 202 RYGIRVNCISPFGVATSMLVNAWRNSG 228
              ++   ++P  V T M VN   N G
Sbjct: 168 ERQVKAIAVAPGIVDTDMQVNIRENVG 194

>pdb|3GMD|A Chain A, Structure-Based Design Of 7-Azaindole-Pyrrolidines As Inhibitors Of 11beta-Hydroxysteroid-Dehydrogenase Type I Length = 264

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 53/184 (28%), Positives = 78/184 (42%), Gaps = 12/184 (6%)
Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVI-ADVEDTLGSVLASTLAPAPVTFVHCDV 87
           L+GK  I+TG ++GIG       ++ GA VV+ A  E+ L  V++  L     +  H   
Sbjct: 7   LQGKKVIVTGASKGIGREMAYHLSKMGAHVVLTARSEEGLQKVVSRCLELGAAS-AHYIA 65
Query: 88  SLEEDI---ENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKG 144
              ED+   E  I       G LD+L  N       +   S+   D      VM VN   
Sbjct: 66  GTMEDMTFAEQFIVKAGKLMGGLDMLILN----HITQTSLSLFHDDIHSVRRVMEVNFLS 121
Query: 145 MALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYG 204
             + +  AA  M+ +  G I   +S+AG +       Y+ASK A+ G       EL  Y 
Sbjct: 122 YVV-MSTAALPMLKQSNGSIAVISSLAGKVTYPMVAPYSASKFALDGFFSTIRTEL--YI 178
Query: 205 IRVN 208
            +VN
Sbjct: 179 TKVN 182

>pdb|2PTG|A Chain A, Crystal Structure Of Eimeria Tenella Enoyl Reductase Length = 319

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 66/152 (43%), Gaps = 24/152 (15%)
Query: 149 IKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGR-YGIRV 207
           ++H   +M   G    +S  +   V+ G G    +++K A+    +  A E GR   +RV
Sbjct: 174 LQHFLPLMKEGGSALALSYIASEKVIPGYG-GGMSSAKAALESDCRTLAFEAGRARAVRV 232
Query: 208 NCISPFGVATSMLVNAWRNSGDGEEEDECMNFG---IPSQKEVRKMEEFVSGLGNLKGTT 264
           NCIS  G   S   +A   +GD    D  +++     P QKE                  
Sbjct: 233 NCISA-GPLKSRAASAIGKAGDKTFIDLAIDYSEANAPLQKE------------------ 273
Query: 265 LRSKDIAEAALYLASDESRYVSGHNLVVDGGV 296
           L S D+  AAL+L S  +R V+G  L VD G+
Sbjct: 274 LESDDVGRAALFLLSPLARAVTGATLYVDNGL 305

>pdb|3F4B|A Chain A, Crystal Structure Of Plasmodium Berghei Enoyl-Acyl-Carrier- Protein Reductase With Triclosan Length = 323

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 56/219 (25%), Positives = 94/219 (42%), Gaps = 32/219 (14%)
Query: 93  IENLINSTVSRYGRLDILYNNAGVLGNQRK-HKSIIDFDADEFDNVMRVNVKGMALGIKH 151
           IE + N   ++YG++ +L ++   L N R+  KS++D   D + + +  +   +    KH
Sbjct: 107 IEEVANLIYNKYGKISMLVHS---LANGREVQKSLLDTSRDGYLDAISKSSYSLISLCKH 163
Query: 152 AARVMINRGGGCI-----ISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGR-YGI 205
             + M N GG  +      S   V G  GG+     +++K A+   T+  A  LGR Y I
Sbjct: 164 FCKFM-NSGGSVVSLTYQASQKVVPGYGGGM-----SSAKAALESDTRVLAYYLGRKYNI 217
Query: 206 RVNCIS--PF------GVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGL 257
           R+N IS  P        +           +  GE + +  +F       +    ++    
Sbjct: 218 RINTISAGPLKSRAATAINKFNNNQKNNMNSSGETDKQNYSF-------IDYAIDYSEKY 270
Query: 258 GNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGV 296
             LK   L S D+   A +L S ES  V+G  + VD G+
Sbjct: 271 APLKKKLL-STDVGSVASFLLSKESSAVTGQTIYVDNGL 308

>pdb|3RJ5|A Chain A, Structure Of Alcohol Dehydrogenase From Drosophila Lebanonesis T114v Mutant Complexed With Nad+ Length = 254

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 58/235 (24%), Positives = 95/235 (40%), Gaps = 18/235 (7%)
Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAK--VVIADVEDTLGSVLASTLAPAP---VTFV 83
           L  K  I      GIG    R   +   K  V++  VE+   + LA   A  P   +TF 
Sbjct: 3   LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENP--TALAELKAINPKVNITFH 60
Query: 84  HCDVSLE-EDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNV 142
             DV++   + + L+     +   +DIL N AG+L + +  ++I    A  F  ++ V  
Sbjct: 61  TYDVTVPVAESKKLLKKIFDQLKTVDILINGAGILDDHQIERTI----AINFTGLVNVTT 116
Query: 143 KGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGR 202
             +    K          GG I +  SV G         Y+ASK A+V  T + A     
Sbjct: 117 AILDFWDKRKG-----GPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSLAKLAPI 171
Query: 203 YGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGL 257
            G+    I+P G+  + LV+ + +  D E     +    P+Q   +  + FV  +
Sbjct: 172 TGVTAYSINP-GITRTPLVHTFNSWLDVEPRVAELLLSHPTQTSEQCGQNFVKAI 225

>pdb|2QHX|A Chain A, Structure Of Pteridine Reductase From Leishmania Major Complexed With A Ligand Length = 328

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 61/262 (23%), Positives = 107/262 (40%), Gaps = 50/262 (19%)
Query: 56  AKVVIADVEDTLGSVLASTLAPAPVT-FVHCDVSLEEDIENLINSTVSRYGRLDILYNNA 114
           A  V AD+ +   + ++     APVT F  C          L+ +  + +GR D+L NNA
Sbjct: 99  AITVQADLSNVATAPVSGADGSAPVTLFTRC--------AELVAACYTHWGRCDVLVNNA 150
Query: 115 GVL-------GNQRKHKSII-------DFDADEF-DNVMRVNVKGMALGIKHAARVMINR 159
                      ++  H+  +          AD F  N +       A   + A     +R
Sbjct: 151 SSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHR 210
Query: 160 GGG-CIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATS 218
           G    II+          LG   YT +K A+ GLT++AA EL    IRVN + P     S
Sbjct: 211 GTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGP---GLS 267
Query: 219 MLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSKDIAEAALYLA 278
           +LV         ++    +  G  S+  + + +               + ++++  ++L 
Sbjct: 268 VLV---------DDMPPAVWEGHRSKVPLYQRDS-------------SAAEVSDVVIFLC 305
Query: 279 SDESRYVSGHNLVVDGGVTTSR 300
           S +++Y++G  + VDGG + +R
Sbjct: 306 SSKAKYITGTCVKVDGGYSLTR 327

>pdb|1E7W|A Chain A, One Active Site, Two Modes Of Reduction Correlate The Mechanism Of Leishmania Pteridine Reductase With Pterin Metabolism And Antifolate Drug Resistance In Trpanosomes Length = 291

Iteration: 1
 Score = 41.2 bits (95), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 61/262 (23%), Positives = 107/262 (40%), Gaps = 50/262 (19%)
Query: 56  AKVVIADVEDTLGSVLASTLAPAPVT-FVHCDVSLEEDIENLINSTVSRYGRLDILYNNA 114
           A  V AD+ +   + ++     APVT F  C          L+ +  + +GR D+L NNA
Sbjct: 62  AITVQADLSNVATAPVSGADGSAPVTLFTRC--------AELVAACYTHWGRCDVLVNNA 113
Query: 115 GVL-------GNQRKHKSII-------DFDADEF-DNVMRVNVKGMALGIKHAARVMINR 159
                      ++  H+  +          AD F  N +       A   + A     +R
Sbjct: 114 SSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHR 173
Query: 160 GGG-CIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATS 218
           G    II+          LG   YT +K A+ GLT++AA EL    IRVN + P     S
Sbjct: 174 GTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGP---GLS 230
Query: 219 MLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSKDIAEAALYLA 278
           +LV         ++    +  G  S+  + + +               + ++++  ++L 
Sbjct: 231 VLV---------DDMPPAVWEGHRSKVPLYQRDS-------------SAAEVSDVVIFLC 268
Query: 279 SDESRYVSGHNLVVDGGVTTSR 300
           S +++Y++G  + VDGG + +R
Sbjct: 269 SSKAKYITGTCVKVDGGYSLTR 290

>pdb|4IXT|A Chain A, Structure Of A 37-fold Mutant Of Halohydrin Dehalogenase (hhec) Bound To Ethyl (r)-4-cyano-3-hydroxybutyrate Length = 254

Iteration: 1
 Score = 41.2 bits (95), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 58/225 (25%), Positives = 91/225 (40%), Gaps = 32/225 (14%)
Query: 87  VSLEEDIENLINSTVSRYGRLDILYNN--AGVLGNQRKHKSIIDFDADEFDNVMRVNVKG 144
           +S +E +E LI +  S  G +DIL +N  A V        ++ D+     D V  + +K 
Sbjct: 54  MSEQEPVE-LIEAVTSALGHVDILVSNDIAPVEWRPIDKYAVEDYR----DMVEALQIKP 108
Query: 145 MALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYG 204
            AL    A++ M  R  G II   S A          Y +++     L    + ELG + 
Sbjct: 109 FALANAVASQ-MKRRKSGHIIFITSAASFGPWKELSTYASARAGASALANALSKELGEHN 167
Query: 205 IRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT 264
           I V  I+P GV          +SGD         +  PS+   +   E V+ +   K T 
Sbjct: 168 IPVFAIAPNGV----------DSGDSP-------YYYPSEP-WKTSPEHVAWV--RKYTA 207
Query: 265 LR----SKDIAEAALYLASDESRYVSGHNLVVDGGVTTSRNCVGL 305
           L+     K++ E   +LAS    Y++G    + GG        G+
Sbjct: 208 LQRLGTQKELGELVTFLASGSCDYLTGQVFWLAGGFPVVERWPGM 252

>pdb|1E92|A Chain A, Pteridine Reductase 1 From Leishmania Major Complexed With Nadp+ And Dihydrobiopterin Length = 288

Iteration: 1
 Score = 41.2 bits (95), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 61/264 (23%), Positives = 108/264 (40%), Gaps = 50/264 (18%)
Query: 54  HGAKVVIADVEDTLGSVLASTLAPAPVT-FVHCDVSLEEDIENLINSTVSRYGRLDILYN 112
           + A  V AD+ +   + ++     APVT F  C          L+ +  + +GR D+L N
Sbjct: 57  NSAITVQADLSNVATAPVSGADGSAPVTLFTRC--------AELVAACYTHWGRCDVLVN 108
Query: 113 NAGVL-------GNQRKHKSII-------DFDADEF-DNVMRVNVKGMALGIKHAARVMI 157
           NA           ++  H+  +          AD F  N +       A   + A     
Sbjct: 109 NASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAK 168
Query: 158 NRGGG-CIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVA 216
           +RG    II+          LG   YT +K A+ GLT++AA EL    IRVN + P    
Sbjct: 169 HRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGP---G 225
Query: 217 TSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSKDIAEAALY 276
            S+LV         ++    +  G  S+  + + +               + ++++  ++
Sbjct: 226 LSVLV---------DDMPPAVWEGHRSKVPLYQRDS-------------SAAEVSDVVIF 263
Query: 277 LASDESRYVSGHNLVVDGGVTTSR 300
           L S +++Y++G  + VDGG + +R
Sbjct: 264 LCSSKAKYITGTCVKVDGGYSLTR 287

>pdb|1W0C|A Chain A, Inhibition Of Leishmania Major Pteridine Reductase (Ptr1) By 2,4,6-Triaminoquinazoline; Structure Of The Nadp Ternary Complex. Length = 307

Iteration: 1
 Score = 41.2 bits (95), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 61/264 (23%), Positives = 108/264 (40%), Gaps = 50/264 (18%)
Query: 54  HGAKVVIADVEDTLGSVLASTLAPAPVT-FVHCDVSLEEDIENLINSTVSRYGRLDILYN 112
           + A  V AD+ +   + ++     APVT F  C          L+ +  + +GR D+L N
Sbjct: 76  NSAITVQADLSNVATAPVSGADGSAPVTLFTRC--------AELVAACYTHWGRCDVLVN 127
Query: 113 NAGVL-------GNQRKHKSII-------DFDADEF-DNVMRVNVKGMALGIKHAARVMI 157
           NA           ++  H+  +          AD F  N +       A   + A     
Sbjct: 128 NASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAK 187
Query: 158 NRGGG-CIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVA 216
           +RG    II+          LG   YT +K A+ GLT++AA EL    IRVN + P    
Sbjct: 188 HRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGP---G 244
Query: 217 TSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSKDIAEAALY 276
            S+LV         ++    +  G  S+  + + +               + ++++  ++
Sbjct: 245 LSVLV---------DDMPPAVWEGHRSKVPLYQRDS-------------SAAEVSDVVIF 282
Query: 277 LASDESRYVSGHNLVVDGGVTTSR 300
           L S +++Y++G  + VDGG + +R
Sbjct: 283 LCSSKAKYITGTCVKVDGGYSLTR 306

>pdb|1FJH|A Chain A, The Crystal Structure Of 3-Alpha-Hydroxysteroid Dehydrogenase From Comamonas Testosteroni, A Member Of The Short Chain DehydrogenaseREDUCTASE FAMILY Length = 257

Iteration: 1
 Score = 41.2 bits (95), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 29/116 (25%), Positives = 48/116 (41%), Gaps = 21/116 (18%)
Query: 181 AYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFG 240
           AY  SK+A+    +  A   G  G+R+N I+P    T +L    ++   GE         
Sbjct: 154 AYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGE--------- 204
Query: 241 IPSQKEVRKMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGV 296
                    + +FV  +G          ++A    +L S  + YV G  +V+DGG+
Sbjct: 205 --------SIAKFVPPMGR----RAEPSEMASVIAFLMSPAASYVHGAQIVIDGGI 248

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	305
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	1e-131
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	1e-108
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	1e-102
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	1e-101
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	1e-100
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	1e-100
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	1e-100
4dqx_A	277	Probable oxidoreductase protein; structural genomi	1e-100
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	8e-98
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	3e-97
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	4e-97
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	6e-97
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	8e-96
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	3e-94
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	8e-94
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	9e-94
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	1e-93
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	1e-92
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	3e-91
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	9e-91
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	3e-90
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	3e-90
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	2e-87
1spx_A	278	Short-chain reductase family member (5L265); paral	3e-87
4e4y_A	244	Short chain dehydrogenase family protein; structur	4e-87
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	4e-87
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	8e-87
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	7e-86
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	8e-86
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	1e-85
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	3e-85
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	3e-85
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	9e-85
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	1e-84
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	1e-83
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	3e-83
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	4e-83
1xkq_A	280	Short-chain reductase family member (5D234); parra	2e-82
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	3e-82
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	2e-81
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	4e-81
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	2e-80
1xhl_A	297	Short-chain dehydrogenase/reductase family member	3e-80
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	5e-80
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	6e-80
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	3e-79
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	7e-79
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	2e-78
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	4e-78
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	5e-78
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	2e-77
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	3e-77
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	7e-77
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	1e-76
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	2e-76
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	2e-76
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	4e-76
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	6e-76
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	6e-76
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	1e-75
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	1e-75
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	2e-75
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	2e-75
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	4e-75
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	5e-75
1xq1_A	266	Putative tropinone reducatse; structural genomics,	6e-75
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	6e-74
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	9e-74
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	4e-73
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	6e-73
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	3e-72
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	1e-71
3imf_A	257	Short chain dehydrogenase; structural genomics, in	3e-71
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	3e-71
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	6e-71
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	7e-71
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	1e-70
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	2e-70
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	2e-70
3cxt_A	291	Dehydrogenase with different specificities; rossma	2e-70
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	8e-70
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	1e-69
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	1e-69
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	2e-69
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	7e-69
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	1e-68
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	2e-68
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	5e-68
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	1e-67
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	1e-67
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	2e-67
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	2e-67
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	5e-67
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	8e-67
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	8e-67
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	3e-66
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	3e-66
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	4e-66
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	1e-65
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	6e-65
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	6e-65
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	1e-64
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	3e-64
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	4e-64
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	1e-63
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	1e-63
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	1e-63
3rih_A	293	Short chain dehydrogenase or reductase; structural	1e-63
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	1e-63
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	4e-63
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	4e-63
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	1e-62
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	4e-62
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	5e-62
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	6e-62
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	6e-62
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	6e-62
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	8e-62
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	8e-62
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	9e-62
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	1e-61
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	7e-60
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	1e-59
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	3e-59
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	4e-59
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	7e-59
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	1e-58
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	2e-58
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	4e-58
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	6e-58
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	7e-58
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	7e-58
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	1e-57
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	2e-57
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	3e-57
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	3e-57
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	7e-57
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	1e-56
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	2e-56
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	2e-56
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	3e-56
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	3e-56
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	4e-56
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	4e-56
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	9e-56
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	1e-55
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	3e-55
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	5e-55
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	5e-55
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	2e-54
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	2e-54
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	3e-54
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	4e-54
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	6e-54
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	6e-54
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	7e-54
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	9e-54
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	2e-53
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	3e-53
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	3e-45
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	3e-52
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	5e-52
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	4e-51
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	5e-51
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	2e-50
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	2e-50
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	1e-48
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	3e-47
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	2e-46
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	1e-44
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	1e-43
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	7e-43
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	8e-43
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	2e-42
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	2e-42
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	1e-40
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	2e-40
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	8e-39
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	8e-37
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	4e-33
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	2e-31
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	3e-30
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	1e-28
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	2e-28
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	1e-27
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	3e-22
4alk_A	282	ENR, enoyl-[acyl-carrier-protein] reductase [NADPH	9e-18
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	2e-17
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	4e-17
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	7e-17
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	1e-16
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	3e-16
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	5e-16
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	2e-15
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	2e-15
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	4e-15
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	6e-15
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	1e-13
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	9e-11
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	4e-10
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	7e-10
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	2e-09
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	4e-08
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	7e-08
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-06
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	3e-05
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	1e-04
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	2e-04
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	6e-04

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* Length = 278

 Score =  374 bits (962), Expect = e-131
 Identities = 126/281 (44%), Positives = 175/281 (62%), Gaps = 23/281 (8%)

Query: 22  APPSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAP-V 80
              S  RL+ KVAIITGGA GIGE   +LF R+GAKVVIAD+ D  G  + + +     +
Sbjct: 7   PDSSTNRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVI 66

Query: 81  TFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRV 140
           +FVHCDV+ +ED+ NL+++T++++G+LDI++ N GVL       SI++   ++F  VM +
Sbjct: 67  SFVHCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLS--TTPYSILEAGNEDFKRVMDI 124

Query: 141 NVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLG-PHAYTASKHAIVGLTKNAACE 199
           NV G  L  KHAARVMI    G I+ TAS++    G G  H YTA+KHA++GLT +   E
Sbjct: 125 NVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLCTE 184

Query: 200 LGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGN 259
           LG YGIRVNC+SP+ VA+ +L + +                        ++EE      N
Sbjct: 185 LGEYGIRVNCVSPYIVASPLLTDVFGVDSS-------------------RVEELAHQAAN 225

Query: 260 LKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTSR 300
           LKGT LR++D+A+A  YLA DES+YVSG NLV+DGG T + 
Sbjct: 226 LKGTLLRAEDVADAVAYLAGDESKYVSGLNLVIDGGYTRTN 266

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* Length = 260

 Score =  314 bits (806), Expect = e-108
 Identities = 96/270 (35%), Positives = 138/270 (51%), Gaps = 34/270 (12%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDV 87
           RL GKVA+++GGARG+G + VR     GAKVV  D+ D  G  +A+ LA A   +VH DV
Sbjct: 4   RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADA-ARYVHLDV 62

Query: 88  SLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMAL 147
           +     +  +++ V+ +G L +L NNAG+L       +I D+   E+  ++ VN+ G+ L
Sbjct: 63  TQPAQWKAAVDTAVTAFGGLHVLVNNAGILNI----GTIEDYALTEWQRILDVNLTGVFL 118

Query: 148 GIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRV 207
           GI+   + M   G G II+ +S+ G+ G +  H YTA+K A+ GLTK+ A ELG  GIRV
Sbjct: 119 GIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRV 178

Query: 208 NCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRS 267
           N I P  V T M                              + E +       G     
Sbjct: 179 NSIHPGLVKTPM---------------------------TDWVPEDIF--QTALGRAAEP 209

Query: 268 KDIAEAALYLASDESRYVSGHNLVVDGGVT 297
            +++   +YLASDES Y +G   VVDGG  
Sbjct: 210 VEVSNLVVYLASDESSYSTGAEFVVDGGTV 239

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 Length = 253

 Score =  298 bits (766), Expect = e-102
 Identities = 85/272 (31%), Positives = 127/272 (46%), Gaps = 27/272 (9%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDV 87
           RL+GKVA++TGGA G+G   V+L    GAKV  +D+ +  G  LA+ L      FV  DV
Sbjct: 3   RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGER-SMFVRHDV 61

Query: 88  SLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMAL 147
           S E D   ++ +   R G L++L NNAG+L        +     ++F  ++++N + + +
Sbjct: 62  SSEADWTLVMAAVQRRLGTLNVLVNNAGILLP----GDMETGRLEDFSRLLKINTESVFI 117

Query: 148 GIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGR--YGI 205
           G +     M    GG II+ ASV+  +       Y+ASK A+  LT+ AA    +  Y I
Sbjct: 118 GCQQGIAAMK-ETGGSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCRKQGYAI 176

Query: 206 RVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL 265
           RVN I P G+ T M+  +    G  +E                             G   
Sbjct: 177 RVNSIHPDGIYTPMMQASLPK-GVSKEMVLHDPKLNR------------------AGRAY 217

Query: 266 RSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
             + IA+  L+LASDES  +SG  L  D  + 
Sbjct: 218 MPERIAQLVLFLASDESSVMSGSELHADNSIL 249

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* Length = 254

 Score =  295 bits (758), Expect = e-101
 Identities = 96/271 (35%), Positives = 133/271 (49%), Gaps = 28/271 (10%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDV 87
            L GK  IITGGARG+G  A R     GA+VV+ADV D  G+  A  L  A   + H DV
Sbjct: 2   DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDA-ARYQHLDV 60

Query: 88  SLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMAL 147
           ++EED + ++      +G +D L NNAG+         +     + F  V+ +N+ G+ +
Sbjct: 61  TIEEDWQRVVAYAREEFGSVDGLVNNAGISTG----MFLETESVERFRKVVEINLTGVFI 116

Query: 148 GIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRV 207
           G+K     M + GGG I++ +S AG+MG     +Y ASK  + GL+K AA ELG   IRV
Sbjct: 117 GMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIRV 176

Query: 208 NCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRS 267
           N + P    T M       +  G  + E      P              +G + G     
Sbjct: 177 NSVHPGMTYTPMT------AETGIRQGEGNYPNTP--------------MGRV-GN--EP 213

Query: 268 KDIAEAALYLASDESRYVSGHNLVVDGGVTT 298
            +IA A + L SD S YV+G  L VDGG TT
Sbjct: 214 GEIAGAVVKLLSDTSSYVTGAELAVDGGWTT 244

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} Length = 277

 Score =  295 bits (758), Expect = e-100
 Identities = 84/279 (30%), Positives = 128/279 (45%), Gaps = 24/279 (8%)

Query: 22  APPSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVT 81
              +H  L GKVAI+TG   GIG A  R  A  G  V+ AD++       A+ +      
Sbjct: 20  GSMNHPDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI-GCGAA 78

Query: 82  FVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVN 141
               DVS E+ I  ++++ V+ +G +D L  NAGV+       S+ID   ++FD V+ +N
Sbjct: 79  ACRVDVSDEQQIIAMVDACVAAFGGVDKLVANAGVVHL----ASLIDTTVEDFDRVIAIN 134

Query: 142 VKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELG 201
           ++G  L  KHAA  MI RGGG I++ +S+AG +   G  AY  SK  I+ L++  A EL 
Sbjct: 135 LRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVGGTGAYGMSKAGIIQLSRITAAELR 194

Query: 202 RYGIRVNCISPFGVATSMLVNAWRNSGDGEEED-ECMNFGIPSQKEVRKMEEFVSGLGNL 260
             GIR N + P  V T M   A                                   G +
Sbjct: 195 SSGIRSNTLLPAFVDTPMQQTAMAMFDGALGAGGARSMIARL--------------QGRM 240

Query: 261 KGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTS 299
                  +++A   ++L SD++  ++G   + DGG   +
Sbjct: 241 ----AAPEEMAGIVVFLLSDDASMITGTTQIADGGTIAA 275

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 Length = 270

 Score =  294 bits (755), Expect = e-100
 Identities = 84/274 (30%), Positives = 131/274 (47%), Gaps = 25/274 (9%)

Query: 24  PSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFV 83
            +  R  GKV ++TGG RGIG   VR F   GA+VVI D +++ G  L   L  A   F+
Sbjct: 2   ATGTRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGA--VFI 59

Query: 84  HCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVK 143
            CDV+ E+D++ L++ T+ R+GRLD + NNAG        +   +  A  F  ++ +N+ 
Sbjct: 60  LCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHP---PPQRPEETSAQGFRQLLELNLL 116

Query: 144 GMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRY 203
           G     K A   +  +  G +I+ +S+ G +G      Y A+K A+  +TK  A +   Y
Sbjct: 117 GTYTLTKLALPYLR-KSQGNVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALDESPY 175

Query: 204 GIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGT 263
           G+RVNCISP  + T +         D            P              LG + G 
Sbjct: 176 GVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQP--------------LGRM-GQ 220

Query: 264 TLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
                ++  AA++LAS+ + + +G  L+V GG  
Sbjct: 221 ---PAEVGAAAVFLASE-ANFCTGIELLVTGGAE 250

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 Length = 267

 Score =  294 bits (755), Expect = e-100
 Identities = 89/283 (31%), Positives = 138/283 (48%), Gaps = 27/283 (9%)

Query: 21  DAPPSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL----A 76
                  R   +V +ITGG  G+G A     A  GAK+ + DV         + +     
Sbjct: 3   ATSSPTTRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAP 62

Query: 77  PAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDN 136
            A V     DVS E  +E  + +T  R+GR+D  +NNAG+ G Q        F A EFD 
Sbjct: 63  DAEVLTTVADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQ---NPTESFTAAEFDK 119

Query: 137 VMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNA 196
           V+ +N++G+ LG++   ++M  +G G +++TASV G+ G      Y A+KH +VGLT+N+
Sbjct: 120 VVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNS 179

Query: 197 ACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEED--ECMNFGIPSQKEVRKMEEFV 254
           A E GRYGIR+N I+P  + T M+ N+ +           E      PS++         
Sbjct: 180 AVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKR--------- 230

Query: 255 SGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
              G        + +IA    +L SD++ YV+   + +DGG +
Sbjct: 231 --YG-------EAPEIAAVVAFLLSDDASYVNATVVPIDGGQS 264

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} Length = 277

 Score =  293 bits (753), Expect = e-100
 Identities = 92/276 (33%), Positives = 140/276 (50%), Gaps = 23/276 (8%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDV 87
            L  +V I+TGG  GIG A   LFA++GA VV+ADV +     +A+ +  +    V  DV
Sbjct: 24  DLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEI-GSKAFGVRVDV 82

Query: 88  SLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMAL 147
           S  +D E+++  T +++GR+D+L NNAG         +++    + +D +M VNVKG+ L
Sbjct: 83  SSAKDAESMVEKTTAKWGRVDVLVNNAGFGT----TGNVVTIPEETWDRIMSVNVKGIFL 138

Query: 148 GIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRV 207
             K+   VM   GGG II+T S           AY ASK AI  LT+  A +  + GIRV
Sbjct: 139 CSKYVIPVMRRNGGGSIINTTSYTATSAIADRTAYVASKGAISSLTRAMAMDHAKEGIRV 198

Query: 208 NCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRS 267
           N ++P  + +      +  + D  +     N                  +  + GT   +
Sbjct: 199 NAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNARAV--------------MDRM-GT---A 240

Query: 268 KDIAEAALYLASDESRYVSGHNLVVDGGVTTSRNCV 303
           ++IAEA L+LASD SR+ +G  L VDGG +   + V
Sbjct: 241 EEIAEAMLFLASDRSRFATGSILTVDGGSSIGNHLV 276

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} Length = 269

 Score =  287 bits (738), Expect = 8e-98
 Identities = 81/271 (29%), Positives = 129/271 (47%), Gaps = 26/271 (9%)

Query: 27  RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCD 86
                KVAI+TGG+ GIG A V    R+GAKVV   +++     ++             D
Sbjct: 10  EEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNVSD--------HFKID 61

Query: 87  VSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMA 146
           V+ EE+++  +  T  +YGR+DIL NNAG+      +  +     + +  ++ VNV G  
Sbjct: 62  VTNEEEVKEAVEKTTKKYGRIDILVNNAGIEQ----YSPLHLTPTEIWRRIIDVNVNGSY 117

Query: 147 LGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIR 206
           L  K+   VM+  G G II+ ASV          AY  SKHA++GLT++ A +     IR
Sbjct: 118 LMAKYTIPVMLAIGHGSIINIASVQSYAATKNAAAYVTSKHALLGLTRSVAIDYAP-KIR 176

Query: 207 VNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLR 266
            N + P  + T M++ A +     +E            +   +       +G +     R
Sbjct: 177 CNAVCPGTIMTPMVIKAAKMEVGEDENAV---------ERKIEEWGRQHPMGRI----GR 223

Query: 267 SKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
            +++AE   +LASD S +++G  L VDGG+ 
Sbjct: 224 PEEVAEVVAFLASDRSSFITGACLTVDGGLL 254

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} Length = 271

 Score =  286 bits (735), Expect = 3e-97
 Identities = 80/270 (29%), Positives = 125/270 (46%), Gaps = 26/270 (9%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDV 87
            LE KVAIITG   GIG    R+ AR GA+VV+AD+ +T  +  A+++          D+
Sbjct: 8   ELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV-GRGAVHHVVDL 66

Query: 88  SLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMAL 147
           + E  +  LI+ T+  +GRLDI+ NNA           +     D +D+   VN +G  L
Sbjct: 67  TNEVSVRALIDFTIDTFGRLDIVDNNAAHSD--PADMLVTQMTVDVWDDTFTVNARGTML 124

Query: 148 GIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRV 207
             K+A   +I+ GGG I++ +S           AY  +K AI  LT+  A + GR+G+R 
Sbjct: 125 MCKYAIPRLISAGGGAIVNISSATAHAAYDMSTAYACTKAAIETLTRYVATQYGRHGVRC 184

Query: 208 NCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRS 267
           N I+P  V T  L       G  +   +       + +           +G         
Sbjct: 185 NAIAPGLVRTPRL-----EVGLPQPIVDIFATHHLAGR-----------IG-------EP 221

Query: 268 KDIAEAALYLASDESRYVSGHNLVVDGGVT 297
            +IAE   +LASD + +++G  +  D G+ 
Sbjct: 222 HEIAELVCFLASDRAAFITGQVIAADSGLL 251

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} Length = 280

 Score =  286 bits (735), Expect = 4e-97
 Identities = 92/277 (33%), Positives = 125/277 (45%), Gaps = 26/277 (9%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPA--PVTFVHC 85
           RLEGK+AI+TG + GIG AA  LFAR GAKVV+        + L   +A        +  
Sbjct: 5   RLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAG 64

Query: 86  DVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGM 145
           DV  E   E L+   V R+G LD  +NNAG LG       I     + +   +  N+   
Sbjct: 65  DVGDEALHEALVELAVRRFGGLDTAFNNAGALG---AMGEISSLSVEGWRETLDTNLTSA 121

Query: 146 ALGIKHAARVMINRGGGCIISTASVAGVMGGL-GPHAYTASKHAIVGLTKNAACELGRYG 204
            L  K+    +   GGG +  T+S  G   G  G   Y ASK  ++GL +  A ELG  G
Sbjct: 122 FLAAKYQVPAIAALGGGSLTFTSSFVGHTAGFAGVAPYAASKAGLIGLVQALAVELGARG 181

Query: 205 IRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT 264
           IRVN + P G  T          G   E    +                   L  +    
Sbjct: 182 IRVNALLPGGTDTPANFANL--PGAAPETRGFVEGLHA--------------LKRI-A-- 222

Query: 265 LRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTSRN 301
            R ++IAEAALYLASD + +V+G  L+ DGG + ++ 
Sbjct: 223 -RPEEIAEAALYLASDGASFVTGAALLADGGASVTKA 258

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 Length = 256

 Score =  285 bits (732), Expect = 6e-97
 Identities = 86/278 (30%), Positives = 126/278 (45%), Gaps = 26/278 (9%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDV 87
              GK  ++TGGARGIG A  + FAR GA V + D+      V  +        F   D+
Sbjct: 3   LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEAIGG----AFFQVDL 58

Query: 88  SLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMAL 147
             E +    +       GR+D+L NNA +        S +     E+  V+ VN+     
Sbjct: 59  EDERERVRFVEEAAYALGRVDVLVNNAAIAAP----GSALTVRLPEWRRVLEVNLTAPMH 114

Query: 148 GIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRV 207
               AAR M   GGG I++ ASV G+       AY ASK  +V LT++ A +L    IRV
Sbjct: 115 LSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAPLRIRV 174

Query: 208 NCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRS 267
           N ++P  +AT  ++ A   S D E                         L  L G   + 
Sbjct: 175 NAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHA--------------LRRL-G---KP 216

Query: 268 KDIAEAALYLASDESRYVSGHNLVVDGGVTTSRNCVGL 305
           +++AEA L+LAS+++ +++G  L VDGG+T S    G 
Sbjct: 217 EEVAEAVLFLASEKASFITGAILPVDGGMTASFMMAGR 254

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} Length = 254

 Score =  282 bits (724), Expect = 8e-96
 Identities = 79/275 (28%), Positives = 133/275 (48%), Gaps = 25/275 (9%)

Query: 25  SHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPA--PVTF 82
           S++ L+ KV I+TG   GIG A  + FA + + VV  ++ +   + +   L      V  
Sbjct: 1   SYQSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLG 60

Query: 83  VHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNV 142
           V  DVS ++D+E  +  T   Y R+D+L NNAG++        + +   + ++ V+ VN+
Sbjct: 61  VKADVSKKKDVEEFVRRTFETYSRIDVLCNNAGIMDGV---TPVAEVSDELWERVLAVNL 117

Query: 143 KGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGR 202
                  +    +M+ +G G I++TAS+AG+ GG     YT +KH ++GLT++ A   G 
Sbjct: 118 YSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGGFAGAPYTVAKHGLIGLTRSIAAHYGD 177

Query: 203 YGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKG 262
            GIR   + P  V T++ + +                   S +           L     
Sbjct: 178 QGIRAVAVLPGTVKTNIGLGSS--KPSELGMRTLTKLMSLSSR-----------LA---- 220

Query: 263 TTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
                +DIA   ++LASDE+ +V+G  +VVDGG+T
Sbjct: 221 ---EPEDIANVIVFLASDEASFVNGDAVVVDGGLT 252

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A Length = 251

 Score =  278 bits (713), Expect = 3e-94
 Identities = 88/274 (32%), Positives = 131/274 (47%), Gaps = 31/274 (11%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAP-VTFVHCD 86
           RL+GKVAIITGG  GIG A    F   GAKV+I      +G   A ++     + F   D
Sbjct: 3   RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHD 62

Query: 87  VSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMA 146
            S E+    L ++T   +G +  L NNAG+  N    KS+ +    E+  ++ VN+ G+ 
Sbjct: 63  SSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVN----KSVEETTTAEWRKLLAVNLDGVF 118

Query: 147 LGIKHAARVMINRG-GGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGR--Y 203
            G +   + M N+G G  II+ +S+ G +G     AY ASK A+  ++K+AA +     Y
Sbjct: 119 FGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDY 178

Query: 204 GIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGT 263
            +RVN + P  + T ++     +   G EE        P              +G     
Sbjct: 179 DVRVNTVHPGYIKTPLV-----DDLPGAEEAMSQRTKTPMGH-----------IG----- 217

Query: 264 TLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
                DIA   +YLAS+ES++ +G   VVDGG T
Sbjct: 218 --EPNDIAYICVYLASNESKFATGSEFVVDGGYT 249

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} Length = 261

 Score =  277 bits (711), Expect = 8e-94
 Identities = 84/274 (30%), Positives = 126/274 (45%), Gaps = 28/274 (10%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDV 87
            LEGKVA+ITG   G GE   + FA+ GAKVVI D +      +A  +       V  D+
Sbjct: 6   SLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI-GDAALAVAADI 64

Query: 88  SLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMAL 147
           S E D++  + + +S++G++DIL NNAG+     K ++    + +EFD ++ VNV+G+ L
Sbjct: 65  SKEADVDAAVEAALSKFGKVDILVNNAGIGH---KPQNAELVEPEEFDRIVGVNVRGVYL 121

Query: 148 GIKHAARVMINRGGG----CIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRY 203
                       G       I++ AS            Y A+K  +V +TK  A EL   
Sbjct: 122 MTSKLIPHFKENGAKGQECVILNVASTGAGRPRPNLAWYNATKGWVVSVTKALAIELAPA 181

Query: 204 GIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGT 263
            IRV  ++P    T +L        D EE  +     IP              +G L   
Sbjct: 182 KIRVVALNPVAGETPLLTTFM--GEDSEEIRKKFRDSIP--------------MGRL-LK 224

Query: 264 TLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
                D+AEAA +L S ++  ++G  L VDGG +
Sbjct: 225 P---DDLAEAAAFLCSPQASMITGVALDVDGGRS 255

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 Length = 262

 Score =  277 bits (711), Expect = 9e-94
 Identities = 79/270 (29%), Positives = 127/270 (47%), Gaps = 13/270 (4%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPA--PVTFVHC 85
           +  GKV ++TG    IG A     A  G  + + D+         +++           C
Sbjct: 4   KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVC 63

Query: 86  DVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGM 145
           DV+ EE +   ++S V  +G++D L+NNAG    Q     + D+ +D+F  V+ +NV G 
Sbjct: 64  DVTSEEAVIGTVDSVVRDFGKIDFLFNNAGY---QGAFAPVQDYPSDDFARVLTINVTGA 120

Query: 146 ALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGI 205
              +K  +R MI +  G I++TAS+AGV G     AY  SK AI+ LT+ AA +L  Y I
Sbjct: 121 FHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALDLAPYNI 180

Query: 206 RVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL 265
           RVN ISP  +    +   W    + + +     F    +   ++M   V  +    G   
Sbjct: 181 RVNAISPGYMGPGFM---WERQVELQAKVGSQYFSTDPKVVAQQMIGSVP-MRRY-GDI- 234

Query: 266 RSKDIAEAALYLASDESRYVSGHNLVVDGG 295
              +I     +L  D+S +++G NL + GG
Sbjct: 235 --NEIPGVVAFLLGDDSSFMTGVNLPIAGG 262

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} Length = 250

 Score =  276 bits (709), Expect = 1e-93
 Identities = 86/270 (31%), Positives = 131/270 (48%), Gaps = 26/270 (9%)

Query: 31  GKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAP---VTFVHCDV 87
            +VAI+TG + G G A    F   G +V   D+        A T   A    V  V  DV
Sbjct: 2   SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADV 61

Query: 88  SLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMAL 147
           + E D+   I +T+ ++G +D+L NNAG+ GN      +     ++FD VM VNV+G+ L
Sbjct: 62  ADEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEA-GVLHTTPVEQFDKVMAVNVRGIFL 120

Query: 148 GIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRV 207
           G +     M+ +G G I++ ASVA ++   G  AYT SK A++ LTK+ A +    GIR 
Sbjct: 121 GCRAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTSKGAVLQLTKSVAVDYAGSGIRC 180

Query: 208 NCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRS 267
           N + P  + T M     +   D  E  + +   IP                 + GT    
Sbjct: 181 NAVCPGMIETPMT----QWRLDQPELRDQVLARIP--------------QKEI-GTA--- 218

Query: 268 KDIAEAALYLASDESRYVSGHNLVVDGGVT 297
             +A+A ++LA +++ YV+G  LV+DG  T
Sbjct: 219 AQVADAVMFLAGEDATYVNGAALVMDGAYT 248

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A Length = 264

 Score =  274 bits (703), Expect = 1e-92
 Identities = 70/272 (25%), Positives = 117/272 (43%), Gaps = 31/272 (11%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDV 87
            L  KV I+TG + GIG A    F   G+KV+   + D            A    + CDV
Sbjct: 5   DLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPGE---------AKYDHIECDV 55

Query: 88  SLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMAL 147
           +  + ++  I+     YG + +L NNAG+         I      E+  ++ VN+ G   
Sbjct: 56  TNPDQVKASIDHIFKEYGSISVLVNNAGIESY----GKIESMSMGEWRRIIDVNLFGYYY 111

Query: 148 GIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRV 207
             K A   MI      I++ +SV   +      AY  SKHA++GLTK+ A +     +R 
Sbjct: 112 ASKFAIPYMIRSRDPSIVNISSVQASIITKNASAYVTSKHAVIGLTKSIALDYAP-LLRC 170

Query: 208 NCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSG--LGNLKGTTL 265
           N + P  + T ++  A       +                +K+ E+     +  + G   
Sbjct: 171 NAVCPATIDTPLVRKAAELEVGSDPMR-----------IEKKISEWGHEHPMQRI-GKP- 217

Query: 266 RSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
             +++A A  +LAS E+ +++G  L VDGG++
Sbjct: 218 --QEVASAVAFLASREASFITGTCLYVDGGLS 247

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} Length = 283

 Score =  271 bits (696), Expect = 3e-91
 Identities = 79/277 (28%), Positives = 119/277 (42%), Gaps = 22/277 (7%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPA--PVTFVHC 85
                VA+ITG   GIG A     A  G  V       T    +A  +  A      +  
Sbjct: 25  NQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEA 84

Query: 86  DVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGM 145
           DVS E  + N +   V ++G LDI+  NAG+ G       I D    E+D  + VN++G 
Sbjct: 85  DVSDELQMRNAVRDLVLKFGHLDIVVANAGINGVW---APIDDLKPFEWDETIAVNLRGT 141

Query: 146 ALGIKHAARVMINRGGGCIISTASVAGV--MGGLGPHAYTASKHAIVGLTKNAACELGRY 203
            L +      +  RGGG I+  +S+ G       G  AYTA+K A V + +  A ELG++
Sbjct: 142 FLTLHLTVPYLKQRGGGAIVVVSSINGTRTFTTPGATAYTATKAAQVAIVQQLALELGKH 201

Query: 204 GIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGT 263
            IRVN + P  + T++  N      +          G     + +         G     
Sbjct: 202 HIRVNAVCPGAIETNISDNTKLRHEEETAIPVEWPKGQVPITDGQ--------PG----- 248

Query: 264 TLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTSR 300
             RS+D+AE   +L S+ +R+V+G  + +DGG    R
Sbjct: 249 --RSEDVAELIRFLVSERARHVTGSPVWIDGGQGLLR 283

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} PDB: 3uwr_A* Length = 286

 Score =  270 bits (693), Expect = 9e-91
 Identities = 81/289 (28%), Positives = 128/289 (44%), Gaps = 31/289 (10%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAP-------- 79
           R+EGKVA +TG ARG G +     A+ GA ++  D+   + + +  T  PA         
Sbjct: 8   RVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAET 67

Query: 80  ----------VTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDF 129
                     +     DV   + ++  ++S V + GRLDI+  NAG+        ++   
Sbjct: 68  ADLVKGHNRRIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGD---TLDKT 124

Query: 130 DADEFDNVMRVNVKGMALGIKHAARVMINRG-GGCIISTASVAGVMGGLGPHAYTASKHA 188
             +++  ++ +N+ G+   +K     MI  G GG II T+SV G+        Y A+KH 
Sbjct: 125 SEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLKAYPHTGHYVAAKHG 184

Query: 189 IVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVR 248
           +VGL +    ELG++ IRVN + P  V T ML N         + +              
Sbjct: 185 VVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLEN---------PGPD 235

Query: 249 KMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
            M         L    +   DI+ A L+ ASDE+RY++G  L +D G  
Sbjct: 236 DMAPICQMFHTLPIPWVEPIDISNAVLFFASDEARYITGVTLPIDAGSC 284

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} Length = 281

 Score =  269 bits (690), Expect = 3e-90
 Identities = 68/278 (24%), Positives = 115/278 (41%), Gaps = 30/278 (10%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADV-----EDTLGSVLASTLAPAPVTF 82
             + +  ++TGG  GIG+         GA V+I           +  + A       + +
Sbjct: 8   SFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRY 67

Query: 83  VHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNV 142
              D++ E++    +++  + +GRL  + + AG   N      I   D++ +   + +NV
Sbjct: 68  EPTDITNEDETARAVDAVTAWHGRLHGVVHCAGGSENI---GPITQVDSEAWRRTVDLNV 124

Query: 143 KGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGR 202
            G    +KHAAR M+  GGG  +  +S+A         AY  +K A+  L + AA ELG 
Sbjct: 125 NGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHRWFGAYGVTKSAVDHLMQLAADELGA 184

Query: 203 YGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKG 262
             +RVN I P  + T ++        +  E         P              L    G
Sbjct: 185 SWVRVNSIRPGLIRTDLVAAIT----ESAELSSDYAMCTP--------------LPRQ-G 225

Query: 263 TTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTSR 300
                +D+A  A++L SD + +V+G  + VDGG    R
Sbjct: 226 EV---EDVANMAMFLLSDAASFVTGQVINVDGGQMLRR 260

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 246

 Score =  267 bits (686), Expect = 3e-90
 Identities = 87/271 (32%), Positives = 137/271 (50%), Gaps = 30/271 (11%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDV 87
           RL+GKV I+T  A+GIG+AA   FAR GAKV+  D+ ++    L        +     DV
Sbjct: 3   RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPG---IQTRVLDV 59

Query: 88  SLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMAL 147
           + ++ I+       +   RLD+L+N AG +     H +++D +  ++D  M +NV+ M L
Sbjct: 60  TKKKQIDQF----ANEVERLDVLFNVAGFV----HHGTVLDCEEKDWDFSMNLNVRSMYL 111

Query: 148 GIKHAARVMINRGGGCIISTASVAGVMGGLGPH-AYTASKHAIVGLTKNAACELGRYGIR 206
            IK     M+ +  G II+ +SVA  + G+     Y+ +K A++GLTK+ A +  + GIR
Sbjct: 112 MIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIR 171

Query: 207 VNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLR 266
            NC+ P  V T  L    +  G+ EE                         G    T   
Sbjct: 172 CNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQK--------------TGRF-ATA-- 214

Query: 267 SKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
            ++IA   +YLASDES YV+G+ +++DGG +
Sbjct: 215 -EEIAMLCVYLASDESAYVTGNPVIIDGGWS 244

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} Length = 299

 Score =  262 bits (672), Expect = 2e-87
 Identities = 84/285 (29%), Positives = 129/285 (45%), Gaps = 27/285 (9%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAP-------- 79
           ++EGKVA ITG ARG G +     AR GA ++  DV   L  V      P          
Sbjct: 25  KVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQV 84

Query: 80  ------VTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADE 133
                 +     DV   + ++  ++  V++ GRLDI+  NA +     +   +   D   
Sbjct: 85  EALGRRIIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALA---SEGTRLNRMDPKT 141

Query: 134 FDNVMRVNVKGMALGIKHAARVMI-NRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGL 192
           + +++ VN+ G  +  + A   ++  + GG I+ T+S+ G+ G      Y ASKH + GL
Sbjct: 142 WRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGAENIGNYIASKHGLHGL 201

Query: 193 TKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEE 252
            +  A ELG   IRVN + P  VAT ML+N         E    M         V   + 
Sbjct: 202 MRTMALELGPRNIRVNIVCPSSVATPMLLN---------EPTYRMFRPDLENPTVEDFQV 252

Query: 253 FVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
               +  L    +   DI+ A L+L SD++RY++G +L VDGG  
Sbjct: 253 ASRQMHVLPIPYVEPADISNAILFLVSDDARYITGVSLPVDGGAL 297

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 278

 Score =  261 bits (669), Expect = 3e-87
 Identities = 90/277 (32%), Positives = 137/277 (49%), Gaps = 23/277 (8%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADV-----EDTLGSVLASTLAPAPVTF 82
           R   KVAIITG + GIG A   LFAR GAKV I        E+T   +LA+ ++   V  
Sbjct: 3   RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNS 62

Query: 83  VHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNV 142
           V  DV+ +   + ++++T+ ++G+LDIL NNAG      + K+      + +D  + +N+
Sbjct: 63  VVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNL 122

Query: 143 KGMALGIKHAARVMINRGGGCIISTASVA-GVMGGLGPHAYTASKHAIVGLTKNAACELG 201
           + +    K A   +     G I++ +S+A G+        Y+ +K AI   T+N A +L 
Sbjct: 123 RSVIALTKKAVPHLS-STKGEIVNISSIASGLHATPDFPYYSIAKAAIDQYTRNTAIDLI 181

Query: 202 RYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLK 261
           ++GIRVN ISP  VAT          G  EE  +     + + KE               
Sbjct: 182 QHGIRVNSISPGLVATGFG----SAMGMPEETSKKFYSTMATMKECVPA----------- 226

Query: 262 GTTLRSKDIAEAALYLASDE-SRYVSGHNLVVDGGVT 297
           G   + +DIAE   +LA  + S Y+ GH LVVDGG +
Sbjct: 227 GVMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGSS 263

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} Length = 244

 Score =  260 bits (666), Expect = 4e-87
 Identities = 71/270 (26%), Positives = 123/270 (45%), Gaps = 30/270 (11%)

Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIA-DVEDTLGSVLASTLAPAPVTFVHCDV 87
                 ++TGG++GIG+A V L  ++    VI  D++ +  +          + F+  D+
Sbjct: 2   NAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSA--------ENLKFIKADL 53

Query: 88  SLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMAL 147
           + ++DI N+++    +    D ++ NAG+L       SI D D +    V+ +NV     
Sbjct: 54  TKQQDITNVLDII--KNVSFDGIFLNAGIL----IKGSIFDIDIESIKKVLDLNVWSSIY 107

Query: 148 GIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRV 207
            IK     +  + G  I+   S    +      AYT SK AI  +TK+ A +L +Y IRV
Sbjct: 108 FIKGLENNL--KVGASIVFNGSDQCFIAKPNSFAYTLSKGAIAQMTKSLALDLAKYQIRV 165

Query: 208 NCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRS 267
           N + P  V T +  N  +   +                E +K EE    L  +       
Sbjct: 166 NTVCPGTVDTDLYRNLIQKYANNVGISF---------DEAQKQEEKEFPLNRI-AQP--- 212

Query: 268 KDIAEAALYLASDESRYVSGHNLVVDGGVT 297
           ++IAE  ++L SD+S++++G  + +DGG T
Sbjct: 213 QEIAELVIFLLSDKSKFMTGGLIPIDGGYT 242

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* Length = 281

 Score =  261 bits (669), Expect = 4e-87
 Identities = 72/273 (26%), Positives = 118/273 (43%), Gaps = 21/273 (7%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADV-EDTLGSVLASTLAPAPVTFVHCD 86
           +L G+VA+ITGGA G+G A V  F   GA+V + D   + L  +  +         V  D
Sbjct: 2   KLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVA--HGGNAVGVVGD 59

Query: 87  VSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRK-HKSIIDFDADEFDNVMRVNVKGM 145
           V   +D +      ++ +G++D L  NAG+            D     FD++  VNVKG 
Sbjct: 60  VRSLQDQKRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGY 119

Query: 146 ALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGI 205
              +K     +++  G  ++ T S AG     G   YTA+KHA+VGL +  A EL    +
Sbjct: 120 IHAVKACLPALVSSRGS-VVFTISNAGFYPNGGGPLYTATKHAVVGLVRQMAFELAP-HV 177

Query: 206 RVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL 265
           RVN ++P G+ T +   +     +       +   + S   + +M               
Sbjct: 178 RVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPIGRMPA------------- 224

Query: 266 RSKDIAEAALYLASDE-SRYVSGHNLVVDGGVT 297
             ++   A ++ A+   S   +G  L  DGG+ 
Sbjct: 225 -LEEYTGAYVFFATRGDSLPATGALLNYDGGMG 256

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} Length = 266

 Score =  260 bits (666), Expect = 8e-87
 Identities = 80/277 (28%), Positives = 123/277 (44%), Gaps = 34/277 (12%)

Query: 25  SHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADV-EDTLGSVLASTLAPAPVTFV 83
           S +  EGKVA++TG A GIG A V      GA+V +AD     + + L           +
Sbjct: 22  SMQGFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAADLH----------L 71

Query: 84  HCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVK 143
             D+      + L  +  +  GRLDI+ NNAGV+        I +    ++   + VNV+
Sbjct: 72  PGDLREAAYADGLPGAVAAGLGRLDIVVNNAGVISR----GRITETTDADWSLSLGVNVE 127

Query: 144 GMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRY 203
                 + A  +M   GGG I++ AS  G+  G G   Y  +K A+  LT+    +    
Sbjct: 128 APFRICRAAIPLMAAAGGGAIVNVASCWGLRPGPGHALYCLTKAALASLTQCMGMDHAPQ 187

Query: 204 GIRVNCISPFGVATSMLVNAWRNSG-DGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKG 262
           GIR+N + P  V T ML   +   G D +     +   +P              LG +  
Sbjct: 188 GIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRTVP--------------LGRI-A 232

Query: 263 TTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTS 299
                +DIA+  L+LASD +RY+ G  + V+GG   +
Sbjct: 233 EP---EDIADVVLFLASDAARYLCGSLVEVNGGKAVA 266

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A Length = 259

 Score =  257 bits (659), Expect = 7e-86
 Identities = 93/278 (33%), Positives = 134/278 (48%), Gaps = 27/278 (9%)

Query: 27  RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCD 86
           +RLEGK A+ITG ARGIG A    + R GA V IAD++       A+ + PA    V  D
Sbjct: 4   KRLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPA-AYAVQMD 62

Query: 87  VSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMA 146
           V+ ++ I+  I +TV   G LDIL NNA +         I++   + ++ +  +NV G  
Sbjct: 63  VTRQDSIDAAIAATVEHAGGLDILVNNAALF----DLAPIVEITRESYEKLFAINVAGTL 118

Query: 147 LGIKHAARVMINRG-GGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGI 205
             ++ AAR MI +G GG II+ AS AG  G      Y A+K A++ LT++A  +L ++ I
Sbjct: 119 FTLQAAARQMIAQGRGGKIINMASQAGRRGEALVAIYCATKAAVISLTQSAGLDLIKHRI 178

Query: 206 RVNCISPFGVATSML--VNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSG--LGNLK 261
            VN I+P  V       V+A     +     E             K          G + 
Sbjct: 179 NVNAIAPGVVDGEHWDGVDALFARYENRPRGE-------------KKRLVGEAVPFGRM- 224

Query: 262 GTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTS 299
           GT    +D+   A++LAS ES Y+      VDGG   S
Sbjct: 225 GTA---EDLTGMAIFLASAESDYIVSQTYNVDGGNWMS 259

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* Length = 255

 Score =  257 bits (658), Expect = 8e-86
 Identities = 81/272 (29%), Positives = 120/272 (44%), Gaps = 30/272 (11%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVT--FVHC 85
           RL+GK AIITG   GIG+     FA  GA VV++D+     + +   +           C
Sbjct: 8   RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRC 67

Query: 86  DVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGM 145
           D++ E+++  L +  +S+ G++DIL NNAG            D    +F     +NV   
Sbjct: 68  DITSEQELSALADFAISKLGKVDILVNNAGGG-----GPKPFDMPMADFRRAYELNVFSF 122

Query: 146 ALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGI 205
               +  A  M   GGG I++  S+A     +   +Y +SK A   L +N A +LG   I
Sbjct: 123 FHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEKNI 182

Query: 206 RVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL 265
           RVN I+P  + T  L +         E ++ M    P              +  L G   
Sbjct: 183 RVNGIAPGAILTDALKSVI-----TPEIEQKMLQHTP--------------IRRL-GQP- 221

Query: 266 RSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
             +DIA AAL+L S  + +VSG  L V GG  
Sbjct: 222 --QDIANAALFLCSPAASWVSGQILTVSGGGV 251

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} Length = 273

 Score =  257 bits (658), Expect = 1e-85
 Identities = 76/272 (27%), Positives = 125/272 (45%), Gaps = 28/272 (10%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADV-EDTLGSVLASTLAPAPVTFVHCD 86
           RL  K+A+ITG   GIG AA + F   GA+V I    +D L + +A          +  D
Sbjct: 26  RLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAE--IGGGAVGIQAD 83

Query: 87  VSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMA 146
            +   +++ L     +  GR+D+L+ NAG          + +   +++D+    NVKG+ 
Sbjct: 84  SANLAELDRLYEKVKAEAGRIDVLFVNAGGG----SMLPLGEVTEEQYDDTFDRNVKGVL 139

Query: 147 LGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIR 206
             ++ A  ++    G  ++ T S AG  G      Y ASK A+    +N   +L   GIR
Sbjct: 140 FTVQKALPLL--ARGSSVVLTGSTAGSTGTPAFSVYAASKAALRSFARNWILDLKDRGIR 197

Query: 207 VNCISPFGVATSMLVNAWRNSGDGEEE-DECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL 265
           +N +SP    T+ LV         ++     +   +P              +G + G   
Sbjct: 198 INTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVP--------------MGRV-GR-- 240

Query: 266 RSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
            ++++A AAL+LASD+S +V+G  L VDGG  
Sbjct: 241 -AEEVAAAALFLASDDSSFVTGAELFVDGGSA 271

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* Length = 260

 Score =  255 bits (655), Expect = 3e-85
 Identities = 85/274 (31%), Positives = 125/274 (45%), Gaps = 27/274 (9%)

Query: 27  RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAP--VTFVH 84
           + LE KVA++T    GIG A  R  A+ GA VV++  +        +TL      VT   
Sbjct: 10  KPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTV 69

Query: 85  CDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKG 144
           C V   ED E L+   V+ +G +DIL +NA V        +IID   + +D ++ VNVK 
Sbjct: 70  CHVGKAEDRERLVAMAVNLHGGVDILVSNAAV---NPFFGNIIDATEEVWDKILHVNVKA 126

Query: 145 MALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYG 204
             L  K     M  RGGG ++  +SV           Y  SK A++GLTKN A EL    
Sbjct: 127 TVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKNLAVELAPRN 186

Query: 205 IRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT 264
           IRVNC++P  + T+     W +    +   E M   +               +  L G  
Sbjct: 187 IRVNCLAPGLIKTNFSQVLWMD----KARKEYMKESLR--------------IRRL-GNP 227

Query: 265 LRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT 298
              +D A    +L S+++ Y++G  +VV GG  +
Sbjct: 228 ---EDCAGIVSFLCSEDASYITGETVVVGGGTAS 258

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 Length = 273

 Score =  256 bits (656), Expect = 3e-85
 Identities = 70/273 (25%), Positives = 120/273 (43%), Gaps = 25/273 (9%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPA--PVTFVHC 85
            L+G  A++TGG++GIG A V   A  GA+V      +                V    C
Sbjct: 18  SLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVC 77

Query: 86  DVSLEEDIENLINSTVSRY-GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKG 144
           D+    + + L+ +    + G+L+IL NNAGV+     HK   DF   +++ +M  N + 
Sbjct: 78  DLLSRTERDKLMQTVAHVFDGKLNILVNNAGVV----IHKEAKDFTEKDYNIIMGTNFEA 133

Query: 145 MALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYG 204
                + A  ++     G +I  +S+AG         Y+ASK AI  +TK+ ACE  +  
Sbjct: 134 AYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWAKDN 193

Query: 205 IRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT 264
           IRVN ++P  + T ++  A + +   +EE +      P              +G   G  
Sbjct: 194 IRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTP--------------MGRA-GKP 238

Query: 265 LRSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
              ++++    +L    + Y++G  +  DGG T
Sbjct: 239 ---QEVSALIAFLCFPAASYITGQIIWADGGFT 268

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} Length = 277

 Score =  255 bits (653), Expect = 9e-85
 Identities = 86/286 (30%), Positives = 125/286 (43%), Gaps = 34/286 (11%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAP-------- 79
           +LEG+VA ITG ARG G A     A  GA ++  D+   L S +    A           
Sbjct: 8   KLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRL 67

Query: 80  -------VTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDAD 132
                  +     D    + +  +++  V+  GRLDI+  NAGV       ++  D   +
Sbjct: 68  VEAANRRIVAAVVDTRDFDRLRKVVDDGVAALGRLDIIVANAGVAA----PQAWDDITPE 123

Query: 133 EFDNVMRVNVKGMALGIKHAARVMINRG-GGCIISTASVAGVMGGLGPHAYTASKHAIVG 191
           +F +VM +NV G    +   A  +I  G GG II  +S AG+        YTASKHA+ G
Sbjct: 124 DFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKMQPFMIHYTASKHAVTG 183

Query: 192 LTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKME 251
           L +  A ELG++ IRVN + P  V T M       +     E               ++ 
Sbjct: 184 LARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETN------------PQLS 231

Query: 252 EFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
             ++    L       +DIA+   +LASDESR V+   + VD G T
Sbjct: 232 HVLTPF--LPDWVAEPEDIADTVCWLASDESRKVTAAQIPVDQGST 275

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} Length = 280

 Score =  254 bits (652), Expect = 1e-84
 Identities = 77/287 (26%), Positives = 120/287 (41%), Gaps = 35/287 (12%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAP-------- 79
            L+G+VA ITG ARG G +     A  GA ++  D+   + + +    A           
Sbjct: 12  SLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARL 71

Query: 80  -------VTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDAD 132
                        DV  +  +  L+   + ++GRLD++  NAGVL   R    + +   +
Sbjct: 72  VEDQGRKALTRVLDVRDDAALRELVADGMEQFGRLDVVVANAGVLSWGR----VWELTDE 127

Query: 133 EFDNVMRVNVKGMALGIKHAARVMINRG-GGCIISTASVAGVMGGLGPHAYTASKHAIVG 191
           ++D V+ VN+ G    ++     MI  G GG I+  +S AG+    G   Y+ASKH +  
Sbjct: 128 QWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKATPGNGHYSASKHGLTA 187

Query: 192 LTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKME 251
           LT   A ELG YGIRVN I P+ V T M+                 +F     +    M 
Sbjct: 188 LTNTLAIELGEYGIRVNSIHPYSVETPMIEPEAMMEIFARHPSFVHSFPPMPVQPNGFMT 247

Query: 252 EFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT 298
                          + ++A+   +LA D S  ++G  + VD G   
Sbjct: 248 ---------------ADEVADVVAWLAGDGSGTLTGTQIPVDKGALK 279

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} Length = 260

 Score =  251 bits (644), Expect = 1e-83
 Identities = 73/274 (26%), Positives = 128/274 (46%), Gaps = 29/274 (10%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPA--PVTFVHC 85
           RL+ +VAI+TGGA+ IG A V   A  GA+V+IAD+++ + +     L      V+ V  
Sbjct: 10  RLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVM 69

Query: 86  DVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGM 145
           DV+  E ++N + S   + GR+DIL   AG+           D    ++   + +N+ GM
Sbjct: 70  DVTNTESVQNAVRSVHEQEGRVDILVACAGI---CISEVKAEDMTDGQWLKQVDINLNGM 126

Query: 146 ALGIKHAARVMINRGGGCIISTASVAGVMGGLGPH--AYTASKHAIVGLTKNAACELGRY 203
               +   R+M+ +  G I++  S++G++        AY ASK  +    ++ A E   +
Sbjct: 127 FRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQQQAAYNASKAGVHQYIRSLAAEWAPH 186

Query: 204 GIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGT 263
           GIR N ++P  + T++     R   +  E  +    G P  +           +G     
Sbjct: 187 GIRANAVAPTYIETTLT----RFGMEKPELYDAWIAGTPMGR-----------VG----- 226

Query: 264 TLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
             +  ++A    +LASD +  ++G  + VD G T
Sbjct: 227 --QPDEVASVVQFLASDAASLMTGAIVNVDAGFT 258

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} Length = 264

 Score =  250 bits (641), Expect = 3e-83
 Identities = 61/270 (22%), Positives = 112/270 (41%), Gaps = 19/270 (7%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADV-EDTLGSVLAS-TLAPAPVTFVHC 85
            L  KV +I+G    +G    R  A  GA +V+A    + L  V    T        V  
Sbjct: 8   LLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGT 67

Query: 86  DVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGM 145
           D++ +  + +L++ T+  YGR+D++ NNA  +      K   +   +   + + + V G 
Sbjct: 68  DITDDAQVAHLVDETMKAYGRVDVVINNAFRVP---SMKPFANTTFEHMRDAIELTVFGA 124

Query: 146 ALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGI 205
              I+     +     G +++  S+          AY  +K A++ +++  A ELG  GI
Sbjct: 125 LRLIQGFTPALE-ESKGAVVNVNSMVVRHSQAKYGAYKMAKSALLAMSQTLATELGEKGI 183

Query: 206 RVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL 265
           RVN + P  +    L + + +                  +++       S L  L  T  
Sbjct: 184 RVNSVLPGYIWGGTLKSYFEHQAGKYGTSV---------EDIYNAAAAGSDLKRL-PTE- 232

Query: 266 RSKDIAEAALYLASDESRYVSGHNLVVDGG 295
              ++A A L++ASD +  ++G  L V+ G
Sbjct: 233 --DEVASAILFMASDLASGITGQALDVNCG 260

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 Length = 267

 Score =  250 bits (641), Expect = 4e-83
 Identities = 75/280 (26%), Positives = 118/280 (42%), Gaps = 43/280 (15%)

Query: 27  RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAP----VTF 82
             + GKVA++TG A+GIG A        GAKV + D     G    + L          F
Sbjct: 3   HMVNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLF 62

Query: 83  VHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNV 142
           + CDV+ ++ + +     V  +GRLDIL NNAGV             +   ++  +++N+
Sbjct: 63  IQCDVADQQQLRDTFRKVVDHFGRLDILVNNAGVN------------NEKNWEKTLQINL 110

Query: 143 KGMALGIKHAARVMINRG---GGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAA-- 197
             +  G       M  +    GG II+ +S+AG+M       Y ASKH IVG T++AA  
Sbjct: 111 VSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALA 170

Query: 198 CELGRYGIRVNCISPFGVATSML--VNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVS 255
             L   G+R+N I P  V T++L  +    N G   E  + +   I              
Sbjct: 171 ANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIK------------- 217

Query: 256 GLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
               +    L    IA   + L  D++  ++G  + +   
Sbjct: 218 -YYGI----LDPPLIANGLITLIEDDA--LNGAIMKITTS 250

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 280

 Score =  249 bits (638), Expect = 2e-82
 Identities = 78/277 (28%), Positives = 127/277 (45%), Gaps = 23/277 (8%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIAD-----VEDTLGSVLASTLAPAPVTF 82
           R   K  IITG + GIG     LFA+ GA V I       +E+T   +L S ++   V  
Sbjct: 3   RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNS 62

Query: 83  VHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNV 142
           V  DV+ E+  + +INST+ ++G++D+L NNAG         +  D   D +   +++N+
Sbjct: 63  VVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNL 122

Query: 143 KGMALGIKHAARVMINRGGGCIISTAS-VAGVMGGLGPHAYTASKHAIVGLTKNAACELG 201
           + +    K     ++    G I++ +S VAG         Y  +K A+   T++ A +L 
Sbjct: 123 QAVIEMTKKVKPHLVAS-KGEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTRSTAIDLA 181

Query: 202 RYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLK 261
           ++GIRVN +SP  V T          G  ++  +     + S KE   +           
Sbjct: 182 KFGIRVNSVSPGMVETGFT----NAMGMPDQASQKFYNFMASHKECIPIGAA-------- 229

Query: 262 GTTLRSKDIAEAALYLASDE-SRYVSGHNLVVDGGVT 297
           G     + IA   L+LA    S Y+ G ++V DGG +
Sbjct: 230 GKP---EHIANIILFLADRNLSFYILGQSIVADGGTS 263

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} Length = 266

 Score =  248 bits (635), Expect = 3e-82
 Identities = 84/274 (30%), Positives = 125/274 (45%), Gaps = 30/274 (10%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAP---VTFVH 84
           RL+GK A+ITG  +GIG    R FA  GA++V++  + +        L       V  V 
Sbjct: 17  RLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVA 76

Query: 85  CDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKG 144
            D++  +    L       +G LD+L NNAG+       + ++D D   FD  + VN++ 
Sbjct: 77  IDLAEPDAPAELARRAAEAFGGLDVLVNNAGI----SHPQPVVDTDPQLFDATIAVNLRA 132

Query: 145 MALGIKHAARVMINRG-GGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRY 203
            AL      + M+  G GG II+ AS A +      +AY  SK  +V  TK  A ELG +
Sbjct: 133 PALLASAVGKAMVAAGEGGAIITVASAAALAPLPDHYAYCTSKAGLVMATKVLARELGPH 192

Query: 204 GIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGT 263
           GIR N + P  V T M    W      E +   M   IP              LG     
Sbjct: 193 GIRANSVCPTVVLTEMGQRVW----GDEAKSAPMIARIP--------------LGRF-AV 233

Query: 264 TLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
                ++++A ++LASD +  ++G ++ VDGG T
Sbjct: 234 P---HEVSDAVVWLASDAASMINGVDIPVDGGYT 264

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} Length = 287

 Score =  247 bits (632), Expect = 2e-81
 Identities = 68/295 (23%), Positives = 112/295 (37%), Gaps = 42/295 (14%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAP-------- 79
           R++ KV ++TGGARG G +     A  GA +++ D+   + +                  
Sbjct: 7   RVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEV 66

Query: 80  ------VTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADE 133
                       DV     +   + + V+ +G+LD++  NAG+                 
Sbjct: 67  EKTGRKAYTAEVDVRDRAAVSRELANAVAEFGKLDVVVANAGICPLGA------HLPVQA 120

Query: 134 FDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMG-----------GLGPHAY 182
           F +   V+  G+   +  A   +    G  II+T SVAG++            G G   Y
Sbjct: 121 FADAFDVDFVGVINTVHAALPYLT--SGASIITTGSVAGLIAAAQPPGAGGPQGPGGAGY 178

Query: 183 TASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIP 242
           + +K  +   T   A +L    IR N I P  V T ML +                  + 
Sbjct: 179 SYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNS--------APMYRQFRPDLE 230

Query: 243 SQKEVRKMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
           +      +  F + +  +    + + DI+ A  +LASDESRYV+G    VD G  
Sbjct: 231 APSRADALLAFPA-MQAMPTPYVEASDISNAVCFLASDESRYVTGLQFKVDAGAM 284

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} Length = 278

 Score =  245 bits (629), Expect = 4e-81
 Identities = 84/291 (28%), Positives = 123/291 (42%), Gaps = 43/291 (14%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAP-------- 79
            L GKVA ITG ARG G A     A  GA ++  D+ D + SV      P          
Sbjct: 10  PLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLV 69

Query: 80  ------VTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADE 133
                 +     DV   E +   + + +   GRLDI+  NAG+          +    D 
Sbjct: 70  EDIGSRIVARQADVRDRESLSAALQAGLDELGRLDIVVANAGIAP--------MSAGDDG 121

Query: 134 FDNVMRVNVKGMALGIKHAARVMINRG-GGCIISTASVAGVMGGLGPH----AYTASKHA 188
           + +V+ VN+ G+   IK A   ++ +G GG I+  +S AG+ G          Y A+KH 
Sbjct: 122 WHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGSADPGSVGYVAAKHG 181

Query: 189 IVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVR 248
           +VGL +  A  L    IRVN I P GV T M+ N +      +                 
Sbjct: 182 VVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAA------------- 228

Query: 249 KMEEFVSGLGN-LKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT 298
              +    +GN +    L  +D+A A  +L SD++RY++G  L VD G   
Sbjct: 229 --TDTPGAMGNAMPVEVLAPEDVANAVAWLVSDQARYITGVTLPVDAGFLN 277

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A Length = 252

 Score =  243 bits (622), Expect = 2e-80
 Identities = 66/279 (23%), Positives = 109/279 (39%), Gaps = 41/279 (14%)

Query: 24  PSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADV-----EDTLGSVLASTLAPA 78
           P    L  ++ ++TG + GIG  A   +AR+GA V++              +   T    
Sbjct: 5   PKQDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQP 64

Query: 79  PVTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVM 138
               +       E+ + L       Y RLD + +NAG+LG+      + + +   + +VM
Sbjct: 65  QWFILDLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDV---CPMSEQNPQVWQDVM 121

Query: 139 RVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAAC 198
           +VNV    +  +    +++    G ++ T+S  G  G     AY ASK A  G+ +  A 
Sbjct: 122 QVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLAD 181

Query: 199 ELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLG 258
           E  +  +RVNCI+P G  T+M  +A+        ED       P+               
Sbjct: 182 EYQQ-RLRVNCINPGGTRTAMRASAF------PTEDP-QKLKTPA--------------- 218

Query: 259 NLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
                     DI    L+L  D+SR  +G       G  
Sbjct: 219 ----------DIMPLYLWLMGDDSRRKTGMTFDAQPGRK 247

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 297

 Score =  244 bits (625), Expect = 3e-80
 Identities = 78/277 (28%), Positives = 134/277 (48%), Gaps = 25/277 (9%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIAD-----VEDTLGSVLASTLAPAPVTF 82
           R  GK  IITG + GIG +A  +FA+ GA+V I       +E+T   +L + +    +  
Sbjct: 23  RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINA 82

Query: 83  VHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNV 142
           V  DV+     +++IN+T++++G++DIL NNAG         +  D   + +    ++N 
Sbjct: 83  VVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGT--ANTDQPVELYQKTFKLNF 140

Query: 143 KGMALGIKHAARVMINRGGGCIISTAS-VAGVMGGLGPHAYTASKHAIVGLTKNAACELG 201
           + +    +     +I +  G I++ +S VAG     G   Y  +K A+   T+  A +L 
Sbjct: 141 QAVIEMTQKTKEHLI-KTKGEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTAIDLI 199

Query: 202 RYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLK 261
           ++G+RVN +SP  VAT  +       G  E   + +   I S+KE   +           
Sbjct: 200 QHGVRVNSVSPGAVATGFM----GAMGLPETASDKLYSFIGSRKECIPVGHC-------- 247

Query: 262 GTTLRSKDIAEAALYLAS-DESRYVSGHNLVVDGGVT 297
           G     ++IA   ++LA  + S Y+ G ++V DGG T
Sbjct: 248 GKP---EEIANIIVFLADRNLSSYIIGQSIVADGGST 281

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} Length = 256

 Score =  242 bits (620), Expect = 5e-80
 Identities = 83/272 (30%), Positives = 129/272 (47%), Gaps = 30/272 (11%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVT--FVHC 85
            L   VAI+TG A GIG A    FA+ GA VV+ D++      +A+ +  A      + C
Sbjct: 9   HLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLEC 68

Query: 86  DVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGM 145
           +V+ E+  E +I + + ++G++ +L NNAG            D    +F+   ++N+  +
Sbjct: 69  NVTDEQHREAVIKAALDQFGKITVLVNNAGGG-----GPKPFDMPMSDFEWAFKLNLFSL 123

Query: 146 ALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGI 205
               + AA  M   GGG I++ +S+AG    +   +Y +SK A+  LT+N A ++G  GI
Sbjct: 124 FRLSQLAAPHMQKAGGGAILNISSMAGENTNVRMASYGSSKAAVNHLTRNIAFDVGPMGI 183

Query: 206 RVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL 265
           RVN I+P  + T  L           E +  M    P              LG L G   
Sbjct: 184 RVNAIAPGAIKTDALATVL-----TPEIERAMLKHTP--------------LGRL-GEA- 222

Query: 266 RSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
             +DIA AAL+L S  + ++SG  L V GG  
Sbjct: 223 --QDIANAALFLCSPAAAWISGQVLTVSGGGV 252

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} Length = 253

 Score =  242 bits (619), Expect = 6e-80
 Identities = 79/272 (29%), Positives = 123/272 (45%), Gaps = 29/272 (10%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVT--FVHC 85
           R E KV I+TG   GIG+A     AR GA VV+AD+       +A  +     T   V  
Sbjct: 6   RFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAV 65

Query: 86  DVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGM 145
           DVS  E  + + + T++ +G +D L NNA + G  +    ++  D + +   M VN+ G 
Sbjct: 66  DVSDPESAKAMADRTLAEFGGIDYLVNNAAIFGGMKL-DFLLTIDPEYYKKFMSVNLDGA 124

Query: 146 ALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGI 205
               +   + M  RGGG I++ +S A  +       Y  +K  I GLT+  + ELG   I
Sbjct: 125 LWCTRAVYKKMTKRGGGAIVNQSSTAAWLYSN---YYGLAKVGINGLTQQLSRELGGRNI 181

Query: 206 RVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL 265
           R+N I+P  + T         +   +E  + +  G+P              L  + GT  
Sbjct: 182 RINAIAPGPIDTEAN-----RTTTPKEMVDDIVKGLP--------------LSRM-GTP- 220

Query: 266 RSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
              D+    L+L SDE+ +++G    VDGG  
Sbjct: 221 --DDLVGMCLFLLSDEASWITGQIFNVDGGQI 250

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* Length = 260

 Score =  240 bits (615), Expect = 3e-79
 Identities = 69/275 (25%), Positives = 118/275 (42%), Gaps = 26/275 (9%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPA--PVTFVHC 85
            LEG  A++TGG+RGIG   V   A  GA V          +   +        V    C
Sbjct: 6   NLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVC 65

Query: 86  DVSLEEDIENLINSTVSRY-GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKG 144
           D+S   + + L+N+  + + G+L+IL NNAG++     +K   D+  +++  +M +N + 
Sbjct: 66  DLSSRSERQELMNTVANHFHGKLNILVNNAGIV----IYKEAKDYTVEDYSLIMSINFEA 121

Query: 145 MALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYG 204
                  A   +     G ++  +SV+G +       Y A+K A+  LT+  A E  +  
Sbjct: 122 AYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDN 181

Query: 205 IRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT 264
           IRVN + P  +ATS+ V       + +E    +                   L  + G  
Sbjct: 182 IRVNGVGPGVIATSL-VEMTIQDPEQKENLNKLIDRCA--------------LRRM-GEP 225

Query: 265 LRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTS 299
              K++A    +L    + YV+G  + VDGG+  +
Sbjct: 226 ---KELAAMVAFLCFPAASYVTGQIIYVDGGLMAN 257

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} Length = 250

 Score =  239 bits (612), Expect = 7e-79
 Identities = 75/274 (27%), Positives = 109/274 (39%), Gaps = 34/274 (12%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDV 87
              GK   +TG  +GIG A    F   GAKV   D         A T    P      DV
Sbjct: 4   DFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFD--------QAFTQEQYPFATEVMDV 55

Query: 88  SLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMAL 147
           +    +  +    ++   RLD L N AG+L    +  +      +++     VNV G   
Sbjct: 56  ADAAQVAQVCQRLLAETERLDALVNAAGIL----RMGATDQLSKEDWQQTFAVNVGGAFN 111

Query: 148 GIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRV 207
             +        + GG I++ AS A     +G  AY ASK A+  L  +   EL   G+R 
Sbjct: 112 LFQQTMNQFRRQRGGAIVTVASDAAHTPRIGMSAYGASKAALKSLALSVGLELAGSGVRC 171

Query: 208 NCISPFGVATSMLVNAWRNSGDGEEED----ECMNFGIPSQKEVRKMEEFVSGLGNLKGT 263
           N +SP    T M    W +    E+      E    GIP  K           +      
Sbjct: 172 NVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLGK-----------IA----- 215

Query: 264 TLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
             R ++IA   L+LASD + +++  ++VVDGG T
Sbjct: 216 --RPQEIANTILFLASDLASHITLQDIVVDGGST 247

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* Length = 249

 Score =  237 bits (608), Expect = 2e-78
 Identities = 82/271 (30%), Positives = 117/271 (43%), Gaps = 26/271 (9%)

Query: 27  RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCD 86
           +RL+ K+A+ITGGA GIG A    FA  GA + IAD+     +  A       V  V CD
Sbjct: 3   QRLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCD 62

Query: 87  VSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMA 146
           VS   D+E      +S +GR DIL NNAG+           +   +++     +NV    
Sbjct: 63  VSQPGDVEAFGKQVISTFGRCDILVNNAGIY----PLIPFDELTFEQWKKTFEINVDSGF 118

Query: 147 LGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIR 206
           L  K     M   G G II+  S    +       Y ++K A +G T+  A +LG+ GI 
Sbjct: 119 LMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDLGKDGIT 178

Query: 207 VNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLR 266
           VN I+P  V T+        S      D   N                  +  L      
Sbjct: 179 VNAIAPSLVRTAT----TEASALSAMFDVLPNMLQA--------------IPRL-QVP-- 217

Query: 267 SKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
             D+  AA +LASD++ +++G  L VDGG+ 
Sbjct: 218 -LDLTGAAAFLASDDASFITGQTLAVDGGMV 247

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} Length = 266

 Score =  237 bits (608), Expect = 4e-78
 Identities = 77/278 (27%), Positives = 115/278 (41%), Gaps = 32/278 (11%)

Query: 23  PPSHRRLEGKVAIITGGA-RGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLA---PA 78
              H  L+GKV ++T  A  GIG    R     GA VVI+D  +         LA     
Sbjct: 14  IDGHGLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLG 73

Query: 79  PVTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVM 138
            V  V CDV+  E ++ LI  TV + GRLD+L NNAG+ G       ++D   +E+D V+
Sbjct: 74  RVEAVVCDVTSTEAVDALITQTVEKAGRLDVLVNNAGLGGQTP----VVDMTDEEWDRVL 129

Query: 139 RVNVKGMALGIKHAARVMINRG-GGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAA 197
            V +  +    + A R       GG I++ ASV G         Y A+K  ++ LT+ +A
Sbjct: 130 NVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQHSQSHYAAAKAGVMALTRCSA 189

Query: 198 CELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGL 257
            E   +G+R+N +SP       L           E  + +                    
Sbjct: 190 IEAVEFGVRINAVSPSIARHKFLEKT-----SSSELLDRLASDEA--------------F 230

Query: 258 GNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
           G          ++A    +LASD S Y++G  + V   
Sbjct: 231 GRA-AEP---WEVAATIAFLASDYSSYMTGEVVSVSSQ 264

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* Length = 261

 Score =  237 bits (607), Expect = 5e-78
 Identities = 83/274 (30%), Positives = 128/274 (46%), Gaps = 30/274 (10%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADV--EDTLGSVLAS-TLAPAPVTFVH 84
            LEGKV +ITG + G+G++    FA   AKVV+     ED   SVL            V 
Sbjct: 4   DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVK 63

Query: 85  CDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKG 144
            DV++E D+ NL+ S +  +G+LD++ NNAG+        S  +    +++ V+  N+ G
Sbjct: 64  GDVTVESDVINLVQSAIKEFGKLDVMINNAGLE----NPVSSHEMSLSDWNKVIDTNLTG 119

Query: 145 MALGIKHAARVMI-NRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRY 203
             LG + A +  + N   G +I+ +SV   +       Y ASK  +  +T+  A E    
Sbjct: 120 AFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPK 179

Query: 204 GIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGT 263
           GIRVN I P  + T +    +       E+   +   IP              +G + G 
Sbjct: 180 GIRVNNIGPGAINTPINAEKF----ADPEQRADVESMIP--------------MGYI-GE 220

Query: 264 TLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
               ++IA  A +LAS E+ YV+G  L  DGG+T
Sbjct: 221 P---EEIAAVAAWLASSEASYVTGITLFADGGMT 251

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} Length = 263

 Score =  235 bits (602), Expect = 2e-77
 Identities = 80/271 (29%), Positives = 128/271 (47%), Gaps = 19/271 (7%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDV 87
            L G+ AI+TGG++GIG A  R   + GA V IAD++      + + L       V  DV
Sbjct: 9   DLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLE-NGGFAVEVDV 67

Query: 88  SLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMAL 147
           +    ++  +   +   G  D+L  NAGV       +  +D   +E+D    VN +G+ L
Sbjct: 68  TKRASVDAAMQKAIDALGGFDLLCANAGVS----TMRPAVDITDEEWDFNFDVNARGVFL 123

Query: 148 GIKHAARVMINRG-GGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIR 206
             + A R  +     G I++TAS+A  +G      Y+ASK A+ G T+  A E+    IR
Sbjct: 124 ANQIACRHFLASNTKGVIVNTASLAAKVGAPLLAHYSASKFAVFGWTQALAREMAPKNIR 183

Query: 207 VNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLR 266
           VNC+ P  V T+M         + E   E    G+  +    +       LG +      
Sbjct: 184 VNCVCPGFVKTAMQ--------EREIIWEAELRGMTPEAVRAEYVSLTP-LGRI-EEP-- 231

Query: 267 SKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
            +D+A+  ++LASD +R+++G  + V GGV 
Sbjct: 232 -EDVADVVVFLASDAARFMTGQGINVTGGVR 261

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A Length = 255

 Score =  235 bits (602), Expect = 3e-77
 Identities = 73/271 (26%), Positives = 115/271 (42%), Gaps = 28/271 (10%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADV-EDTLGSVLASTLAPAPVTFVHCD 86
             +GK AI+ GG  G+G A VR     GA+V++    E  +  +         V  +  D
Sbjct: 5   NYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREE--FGPRVHALRSD 62

Query: 87  VSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMA 146
           ++   +I  L  +     G +D+L+ NAGV     + +         +D    VN KG  
Sbjct: 63  IADLNEIAVLGAAAGQTLGAIDLLHINAGVS----ELEPFDQVSEASYDRQFAVNTKGAF 118

Query: 147 LGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIR 206
             ++    ++  R GG I+ T+SVA   G  G   Y+ASK A+V      A EL   GIR
Sbjct: 119 FTVQRLTPLI--REGGSIVFTSSVADEGGHPGMSVYSASKAALVSFASVLAAELLPRGIR 176

Query: 207 VNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLR 266
           VN +SP  + T     A     +  E     +   P ++            G        
Sbjct: 177 VNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPMKR-----------NG-------T 218

Query: 267 SKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
           + ++A A L+LA + + + +G  L VDGG+ 
Sbjct: 219 ADEVARAVLFLAFE-ATFTTGAKLAVDGGLG 248

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} Length = 317

 Score =  236 bits (604), Expect = 7e-77
 Identities = 80/285 (28%), Positives = 129/285 (45%), Gaps = 28/285 (9%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAP-------- 79
           RL+GKVA ITG ARG G       A+ GA +V  D+     ++  +  +P          
Sbjct: 43  RLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLV 102

Query: 80  ------VTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADE 133
                 +     DV     ++ +++  ++ +G +DIL +N G+         ++     +
Sbjct: 103 EEQGRRIIARQADVRDLASLQAVVDEALAEFGHIDILVSNVGISNQGE----VVSLTDQQ 158

Query: 134 FDNVMRVNVKGMALGIKHAARVMINRG-GGCIISTASVAGVMGGLGPHAYTASKHAIVGL 192
           + ++++ N+ G     +     MI RG GG +I  +S  G+ G  G   Y ASKH + GL
Sbjct: 159 WSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGAPGQSHYAASKHGVQGL 218

Query: 193 TKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEE 252
             + A E+GR+ IRVN ++P  V T M +N         E+   M              E
Sbjct: 219 MLSLANEVGRHNIRVNSVNPGAVNTEMALN---------EKLLKMFLPHLENPTREDAAE 269

Query: 253 FVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
             S L  L    +  +D++ A  +LASDE+RY+ G  + VDGG  
Sbjct: 270 LFSQLTLLPIPWVEPEDVSNAVAWLASDEARYIHGAAIPVDGGQL 314

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} Length = 247

 Score =  233 bits (597), Expect = 1e-76
 Identities = 67/273 (24%), Positives = 106/273 (38%), Gaps = 41/273 (15%)

Query: 24  PSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIAD-----VEDTLGSVLASTLAPA 78
                L+G+V ++TG ARGIG AA R +A HGA VV+       + +    + ++     
Sbjct: 7   AHPELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQP 66

Query: 79  PVTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVM 138
            +  ++ + +  +    L       +GRLD L +NA ++G +     +     ++F  VM
Sbjct: 67  LIIALNLENATAQQYRELAARVEHEFGRLDGLLHNASIIGPR---TPLEQLPDEDFMQVM 123

Query: 139 RVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAAC 198
            VNV    +  +    ++       I  T+S  G  G     AY  SK A  GL +  A 
Sbjct: 124 HVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKGRANWGAYGVSKFATEGLMQTLAD 183

Query: 199 EL-GRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGL 257
           EL G   +R N I+P    T M   A+ +               P               
Sbjct: 184 ELEGVTAVRANSINPGATRTGMRAQAYPDE-------------NPL-------------- 216

Query: 258 GNLKGTTLRSKDIAEAALYLASDESRYVSGHNL 290
            N        +DI    LYL   +S  ++G  L
Sbjct: 217 -NNPAP----EDIMPVYLYLMGPDSTGINGQAL 244

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* Length = 265

 Score =  233 bits (597), Expect = 2e-76
 Identities = 60/277 (21%), Positives = 105/277 (37%), Gaps = 26/277 (9%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADV-EDTLGSV---LASTLAPAPVTFV 83
            L   VA++TGG+ GIG A V L    GA V       + L +    L      A +   
Sbjct: 5   DLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFAS 64

Query: 84  HCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVK 143
            CDV     +     +     G   IL NNAG    Q +  +  +   + +   +++   
Sbjct: 65  VCDVLDALQVRAFAEACERTLGCASILVNNAG----QGRVSTFAETTDEAWSEELQLKFF 120

Query: 144 GMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRY 203
            +   ++     + +R    I+   S+          A +A++  +  L ++ A E    
Sbjct: 121 SVIHPVRAFLPQLESRADAAIVCVNSLLASQPEPHMVATSAARAGVKNLVRSMAFEFAPK 180

Query: 204 GIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEV---RKMEEFVSGLGNL 260
           G+RVN I    V +      +    + E +       +   K++   R        LG  
Sbjct: 181 GVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPLGR--------LG-- 230

Query: 261 KGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
                +  + A A L+LAS  S Y +G ++ V GG++
Sbjct: 231 -----KPIEAARAILFLASPLSAYTTGSHIDVSGGLS 262

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} Length = 276

 Score =  233 bits (597), Expect = 2e-76
 Identities = 81/275 (29%), Positives = 130/275 (47%), Gaps = 34/275 (12%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVT--FVHC 85
            L GK A+ITG + GIG+     +A  GA+V +A        V+A  +A        + C
Sbjct: 29  DLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRC 88

Query: 86  DVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGM 145
           DV+  + +  +++      G +DI   NAG++      ++++D   +EF  +   NV G+
Sbjct: 89  DVTQPDQVRGMLDQMTGELGGIDIAVCNAGIV----SVQAMLDMPLEEFQRIQDTNVTGV 144

Query: 146 ALGIKHAARVMINRG-GGCIISTASVAGVMGGLGPH--AYTASKHAIVGLTKNAACELGR 202
            L  + AAR M+++G GG II+TAS++G +  +      Y  SK A+V LTK  A EL  
Sbjct: 145 FLTAQAAARAMVDQGLGGTIITTASMSGHIINIPQQVSHYCTSKAAVVHLTKAMAVELAP 204

Query: 203 YGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKG 262
           + IRVN +SP  + T +            +        IP  +                G
Sbjct: 205 HQIRVNSVSPGYIRTEL-------VEPLADYHALWEPKIPLGRM---------------G 242

Query: 263 TTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
                +++    LYLAS  S Y++G ++V+DGG T
Sbjct: 243 RP---EELTGLYLYLASAASSYMTGSDIVIDGGYT 274

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} Length = 258

 Score =  232 bits (594), Expect = 4e-76
 Identities = 79/270 (29%), Positives = 129/270 (47%), Gaps = 22/270 (8%)

Query: 31  GKVAIITGGARGIGEAAVRLFARHGAKVVIADV---EDTLGSVLAS-TLAPAPVTFVHCD 86
            KVA++TGGA+GIG       A  G  + +AD+   E+     +     A     FV  D
Sbjct: 2   SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLD 61

Query: 87  VSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMA 146
           V+ + + ++ I+    + G  D+L NNAG+     + K +++   ++   +  VNV  + 
Sbjct: 62  VTDKANFDSAIDEAAEKLGGFDVLVNNAGIA----QIKPLLEVTEEDLKQIYSVNVFSVF 117

Query: 147 LGIKHAARVMINRG-GGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGI 205
            GI+ A+R     G  G II+ AS+A + G     AY+ +K A+ GLT+ AA EL   G 
Sbjct: 118 FGIQAASRKFDELGVKGKIINAASIAAIQGFPILSAYSTTKFAVRGLTQAAAQELAPKGH 177

Query: 206 RVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL 265
            VN  +P  V T M         +  + +     G P  +  ++    ++ LG       
Sbjct: 178 TVNAYAPGIVGTGMW--------EQIDAELSKINGKPIGENFKEYSSSIA-LGRP-SVP- 226

Query: 266 RSKDIAEAALYLASDESRYVSGHNLVVDGG 295
             +D+A    +LAS+ S YV+G  ++VDGG
Sbjct: 227 --EDVAGLVSFLASENSNYVTGQVMLVDGG 254

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 Length = 256

 Score =  232 bits (593), Expect = 6e-76
 Identities = 84/269 (31%), Positives = 121/269 (44%), Gaps = 20/269 (7%)

Query: 32  KVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPA--PVTFVHCDVSL 89
           KVA++TG  +GIG+A      + G  V IAD  D     +AS +  A      V  DVS 
Sbjct: 3   KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSD 62

Query: 90  EEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGI 149
            + +   +       G  D++ NNAGV         I     +  D V  +NVKG+  GI
Sbjct: 63  RDQVFAAVEQARKTLGGFDVIVNNAGVA----PSTPIESITPEIVDKVYNINVKGVIWGI 118

Query: 150 KHAARVMINRG-GGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVN 208
           + A       G GG II+  S AG +G      Y++SK A+ GLT+ AA +L   GI VN
Sbjct: 119 QAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVN 178

Query: 209 CISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSK 268
              P  V T M            +       G P      +  + ++ LG L       +
Sbjct: 179 GYCPGIVKTPMW--------AEIDRQVSEAAGKPLGYGTAEFAKRIT-LGRL-SEP---E 225

Query: 269 DIAEAALYLASDESRYVSGHNLVVDGGVT 297
           D+A    YLAS +S Y++G +L++DGG+ 
Sbjct: 226 DVAACVSYLASPDSDYMTGQSLLIDGGMV 254

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} Length = 279

 Score =  232 bits (594), Expect = 6e-76
 Identities = 66/274 (24%), Positives = 114/274 (41%), Gaps = 31/274 (11%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPA--PVTFVHC 85
            L+GKVA +TG + GIG A    +A+ GA V I                          C
Sbjct: 31  SLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKC 90

Query: 86  DVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGM 145
           ++S  + +E  I+     +G +D+   NAGV     +   I   + D ++ ++ V++ G+
Sbjct: 91  NISDPKSVEETISQQEKDFGTIDVFVANAGV--TWTQGPEIDVDNYDSWNKIISVDLNGV 148

Query: 146 ALGIKHAARVMINRGGGCIISTASVAGVMGGLGPH--AYTASKHAIVGLTKNAACELGRY 203
                +  ++    G G +I T+S++G +  +      Y  +K A   L K+ A E   +
Sbjct: 149 YYCSHNIGKIFKKNGKGSLIITSSISGKIVNIPQLQAPYNTAKAACTHLAKSLAIEWAPF 208

Query: 204 GIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGT 263
             RVN ISP  + T +           ++         P  +E               G 
Sbjct: 209 A-RVNTISPGYIDTDI------TDFASKDMKAKWWQLTPLGRE---------------GL 246

Query: 264 TLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
           T   +++    LYLAS+ S + +G ++V+DGG T
Sbjct: 247 T---QELVGGYLYLASNASTFTTGSDVVIDGGYT 277

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* Length = 244

 Score =  230 bits (590), Expect = 1e-75
 Identities = 71/271 (26%), Positives = 107/271 (39%), Gaps = 33/271 (12%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDV 87
            L G+  ++TG  +GIG   V+     GA+VV           L           V  D+
Sbjct: 4   FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGI--EPVCVDL 61

Query: 88  SLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMAL 147
              E  E      +   G +D+L NNA V       +  ++   + FD    VN++ +  
Sbjct: 62  GDWEATE----RALGSVGPVDLLVNNAAVA----LLQPFLEVTKEAFDRSFEVNLRAVIQ 113

Query: 148 GIKHAARVMINRG-GGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIR 206
             +  AR +I RG  G I++ +S            Y ++K A+  LTK  A ELG + IR
Sbjct: 114 VSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIR 173

Query: 207 VNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLR 266
           VN ++P  V TSM    W +      + + M   IP  K                     
Sbjct: 174 VNAVNPTVVMTSMGQATWSD----PHKAKTMLNRIPLGK-----------FA-------E 211

Query: 267 SKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
            + +  A L+L SD S   +G  L V+GG  
Sbjct: 212 VEHVVNAILFLLSDRSGMTTGSTLPVEGGFW 242

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* Length = 254

 Score =  230 bits (590), Expect = 1e-75
 Identities = 82/272 (30%), Positives = 118/272 (43%), Gaps = 29/272 (10%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDV 87
           RL+G  A +TG   GIG    R FA  GA++++ D E       A  L  A    +  DV
Sbjct: 8   RLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVADV 67

Query: 88  SLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMAL 147
           +  E +             + IL N+AG+     +    ++ D   +  VM VNV GM  
Sbjct: 68  TDAEAMTAAAA-EAEAVAPVSILVNSAGI----ARLHDALETDDATWRQVMAVNVDGMFW 122

Query: 148 GIKHAARVMINRGGGCIISTASVAGVMGGLGPH--AYTASKHAIVGLTKNAACELGRYGI 205
             +   R M+ RG G I++  S++G +        +Y ASK A+  LT+  A E    G+
Sbjct: 123 ASRAFGRAMVARGAGAIVNLGSMSGTIVNRPQFASSYMASKGAVHQLTRALAAEWAGRGV 182

Query: 206 RVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL 265
           RVN ++P  VAT M +       +  E  E      P  +            G       
Sbjct: 183 RVNALAPGYVATEMTLKMR----ERPELFETWLDMTPMGR-----------CG------- 220

Query: 266 RSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
              +IA AAL+LAS  + YV+G  L VDGG T
Sbjct: 221 EPSEIAAAALFLASPAASYVTGAILAVDGGYT 252

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 Length = 244

 Score =  230 bits (588), Expect = 2e-75
 Identities = 71/273 (26%), Positives = 114/273 (41%), Gaps = 33/273 (12%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDV 87
              G  A++TG  +GIG   V+     GAKVV     ++    LA          V  D+
Sbjct: 4   NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGI--EPVCVDL 61

Query: 88  SLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMAL 147
              +  E      +   G +D+L NNA ++      +  ++   + FD    VN++ +  
Sbjct: 62  GDWDATE----KALGGIGPVDLLVNNAALV----IMQPFLEVTKEAFDRSFSVNLRSVFQ 113

Query: 148 GIKHAARVMINRG-GGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIR 206
             +  AR MINRG  G I++ +S+   +       Y+++K A+  LTK  A ELG + IR
Sbjct: 114 VSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHKIR 173

Query: 207 VNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLR 266
           VN ++P  V T M      +     E    +    P +K              +      
Sbjct: 174 VNSVNPTVVLTDMGKKVSAD----PEFARKLKERHPLRK-----------FAEV------ 212

Query: 267 SKDIAEAALYLASDESRYVSGHNLVVDGGVTTS 299
            +D+  + L+L SD S   SG  ++VD G   S
Sbjct: 213 -EDVVNSILFLLSDRSASTSGGGILVDAGYLAS 244

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} Length = 244

 Score =  230 bits (588), Expect = 2e-75
 Identities = 49/264 (18%), Positives = 85/264 (32%), Gaps = 24/264 (9%)

Query: 32  KVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEE 91
            +A++T      G AAV    + G  VV  D         A+                E+
Sbjct: 2   VIALVTHARHFAGPAAVEALTQDGYTVVCHD----ASFADAAERQRFESENPGTIALAEQ 57

Query: 92  DIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKH 151
             E L+++T+     +D + +N  +         +      +   +         L ++ 
Sbjct: 58  KPERLVDATLQHGEAIDTIVSNDYIPRPM-NRLPLEGTSEADIRQMFEALSIFPILLLQS 116

Query: 152 AARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCIS 211
           A   +   GG  +I   S  G         Y  ++ A V L ++AA  L R GI +  I 
Sbjct: 117 AIAPLRAAGGASVIFITSSVGKKPLAYNPLYGPARAATVALVESAAKTLSRDGILLYAIG 176

Query: 212 PFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSKDIA 271
           P             +  +  E  E ++  +P              LG L G      ++ 
Sbjct: 177 PNFFNNPT-YFPTSDWENNPELRERVDRDVP--------------LGRL-GRP---DEMG 217

Query: 272 EAALYLASDESRYVSGHNLVVDGG 295
               +LAS  +  + G      GG
Sbjct: 218 ALITFLASRRAAPIVGQFFAFTGG 241

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A Length = 255

 Score =  229 bits (587), Expect = 4e-75
 Identities = 77/269 (28%), Positives = 116/269 (43%), Gaps = 17/269 (6%)

Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVS 88
           L+GK A++TG   GIG    ++ AR GA +V+    D   ++               D+S
Sbjct: 2   LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPALAEIARHGVKAVHHPADLS 61

Query: 89  LEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALG 148
               IE L       +G +DIL NNAG+   Q     +  F  + +D ++ +N+  +  G
Sbjct: 62  DVAQIEALFALAEREFGGVDILVNNAGI---QHV-APVEQFPLESWDKIIALNLSAVFHG 117

Query: 149 IKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVN 208
            + A   M  R  G II+ ASV G++G  G  AY A+KH +VGLTK    E     +  N
Sbjct: 118 TRLALPGMRARNWGRIINIASVHGLVGSTGKAAYVAAKHGVVGLTKVVGLETATSNVTCN 177

Query: 209 CISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSK 268
            I P  V T ++          + +D   N G P Q +   + E            +  +
Sbjct: 178 AICPGWVLTPLV--------QKQIDDRAANGGDPLQAQHDLLAEKQP-----SLAFVTPE 224

Query: 269 DIAEAALYLASDESRYVSGHNLVVDGGVT 297
            + E  L+L S+    V G    VDGG  
Sbjct: 225 HLGELVLFLCSEAGSQVRGAAWNVDGGWL 253

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} Length = 281

 Score =  230 bits (589), Expect = 5e-75
 Identities = 82/292 (28%), Positives = 126/292 (43%), Gaps = 31/292 (10%)

Query: 22  APPSHRRLEGKVAIITGGARGIGEA-AVRLFARHGAKVVIADVEDTLGSV---------L 71
            P S    EGK A+ITGGARG+G + AV L A  GA + I D  +    V         L
Sbjct: 1   GPGSMADFEGKTALITGGARGMGRSHAVAL-AEAGADIAICDRCENSDVVGYPLATADDL 59

Query: 72  ASTLAP-----APVTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSI 126
           A T+A              DV     +E+ +       G +DI   NAG+         +
Sbjct: 60  AETVALVEKTGRRCISAKVDVKDRAALESFVAEAEDTLGGIDIAITNAGIS----TIALL 115

Query: 127 IDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASK 186
            + ++ ++D V+  N+ G    I   A  MI R  G I++ +S+ G        +Y +SK
Sbjct: 116 PEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSANFAQASYVSSK 175

Query: 187 HAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKE 246
             ++GLTK AA +L  YGI VN ++P  + T M  N          +          +K 
Sbjct: 176 WGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHN----------DFVFGTMRPDLEKP 225

Query: 247 VRKMEEFVSGLGN-LKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
             K  E V    +      L+ +++  A L+L  + S +++G  L +D G T
Sbjct: 226 TLKDVESVFASLHLQYAPFLKPEEVTRAVLFLVDEASSHITGTVLPIDAGAT 277

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A Length = 266

 Score =  229 bits (587), Expect = 6e-75
 Identities = 75/273 (27%), Positives = 124/273 (45%), Gaps = 30/273 (10%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPA--PVTFVHC 85
            L+ K  ++TGG +GIG A V  FA  GA +      +   +   S        VT   C
Sbjct: 11  SLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVC 70

Query: 86  DVSLEEDIENLINSTVSRYG-RLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKG 144
           D SL  + E L+ +  S +G +LDIL NN G +    + K  +D+ A++F   +  N++ 
Sbjct: 71  DASLRPEREKLMQTVSSMFGGKLDILINNLGAI----RSKPTLDYTAEDFSFHISTNLES 126

Query: 145 MALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYG 204
                + A  ++   G G II  +S+AGV+       Y+A+K A+  L +N ACE    G
Sbjct: 127 AYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWASDG 186

Query: 205 IRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT 264
           IR N ++P  +AT +    +      +E  + +    P              LG   G  
Sbjct: 187 IRANAVAPAVIATPLAEAVY-----DDEFKKVVISRKP--------------LGRF-GEP 226

Query: 265 LRSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
              ++++    +L    + Y++G  + VDGG+T
Sbjct: 227 ---EEVSSLVAFLCMPAASYITGQTICVDGGLT 256

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} Length = 281

 Score =  227 bits (581), Expect = 6e-74
 Identities = 80/275 (29%), Positives = 131/275 (47%), Gaps = 20/275 (7%)

Query: 27  RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADV--EDTLGSVLASTLAPAPVT--F 82
           + +  K A+ITG   GIG A  R  A+ GA +V+      D + +V       +  T   
Sbjct: 21  QSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLH 80

Query: 83  VHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNV 142
              D++   +I +++     R+G  DIL NNAGV   Q     I DF  +++D ++ VN+
Sbjct: 81  HPADMTKPSEIADMMAMVADRFGGADILVNNAGV---QFVE-KIEDFPVEQWDRIIAVNL 136

Query: 143 KGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGR 202
                 I+ A   M  +G G II+ AS  G++      AY A+KH I+GLTK  A E+  
Sbjct: 137 SSSFHTIRGAIPPMKKKGWGRIINIASAHGLVASPFKSAYVAAKHGIMGLTKTVALEVAE 196

Query: 203 YGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKG 262
            G+ VN I P  V T ++        + +  D+    GI  ++ + ++            
Sbjct: 197 SGVTVNSICPGYVLTPLV--------EKQIPDQARTRGITEEQVINEVMLKGQPTKKF-- 246

Query: 263 TTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
             +  + +A  ALYLA D++  ++G ++ +DGG T
Sbjct: 247 --ITVEQVASLALYLAGDDAAQITGTHVSMDGGWT 279

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} Length = 260

 Score =  226 bits (579), Expect = 9e-74
 Identities = 71/275 (25%), Positives = 118/275 (42%), Gaps = 42/275 (15%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDV 87
           R + KV +ITG ++GIG   VR +     +VV                A   +  V  D+
Sbjct: 25  RNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRS-------IKPSADPDIHTVAGDI 77

Query: 88  SLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMAL 147
           S  E  + ++   + R+GR+D L NNAGV       K  ++   +++D+ + VNV G   
Sbjct: 78  SKPETADRIVREGIERFGRIDSLVNNAGVF----LAKPFVEMTQEDYDHNLGVNVAGFFH 133

Query: 148 GIKHAARVMINRGGGCIISTASVAGVMG--GLGPHAYTASKHAIVGLTKNAACELGRYGI 205
             + AA  M+ +G G I+S  +        G+     + +K  +  +T++ A E  R G+
Sbjct: 134 ITQRAAAEMLKQGSGHIVSITTSLVDQPMVGMPSALASLTKGGLNAVTRSLAMEFSRSGV 193

Query: 206 RVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL 265
           RVN +SP  + T M            E    +    P              +G + G   
Sbjct: 194 RVNAVSPGVIKTPM---------HPAETHSTLAGLHP--------------VGRM-GEI- 228

Query: 266 RSKDIAEAALYLASDESRYVSGHNLVVDGGVTTSR 300
             +D+ +A LYL  + + +++G  L VDGG    R
Sbjct: 229 --RDVVDAVLYL--EHAGFITGEILHVDGGQNAGR 259

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* Length = 260

 Score =  224 bits (574), Expect = 4e-73
 Identities = 78/273 (28%), Positives = 125/273 (45%), Gaps = 20/273 (7%)

Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADV--EDTLGSVLASTLAPA--PVTFVH 84
           L+GKVA++TG   GIG       A  GA +V+        +  V A   A     V +  
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDG 61

Query: 85  CDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKG 144
            D+S  E +  L+++ V + GR+DIL NNAG+    +    I DF  +++D ++ +N+  
Sbjct: 62  ADLSKGEAVRGLVDNAVRQMGRIDILVNNAGI----QHTALIEDFPTEKWDAILALNLSA 117

Query: 145 MALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYG 204
           +  G   A   M  +G G II+ AS  G++      AY A+KH +VG TK  A E    G
Sbjct: 118 VFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQG 177

Query: 205 IRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT 264
           I  N I P  V T ++        + +        G+  +   R++              
Sbjct: 178 ITANAICPGWVRTPLV--------EKQISALAEKNGVDQETAARELLSEKQPSLQF---- 225

Query: 265 LRSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
           +  + +   A++LASD +  ++G  + VDGG T
Sbjct: 226 VTPEQLGGTAVFLASDAAAQITGTTVSVDGGWT 258

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* Length = 254

 Score =  224 bits (573), Expect = 6e-73
 Identities = 51/266 (19%), Positives = 83/266 (31%), Gaps = 27/266 (10%)

Query: 32  KVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEE 91
             AI+T      G  +    +  G  V   D            L     T+       E+
Sbjct: 2   STAIVTNVKHFGGMGSALRLSEAGHTVACHD----ESFKQKDELEAFAETYPQLKPMSEQ 57

Query: 92  DIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKH 151
           +   LI +  S YG++D+L +N        + + I  +  +++   +          +  
Sbjct: 58  EPAELIEAVTSAYGQVDVLVSNDIF---APEFQPIDKYAVEDYRGAVEALQIRPFALVNA 114

Query: 152 AARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCIS 211
            A  M  R  G II   S            YT+++     L    + ELG Y I V  I 
Sbjct: 115 VASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTLANALSKELGEYNIPVFAIG 174

Query: 212 PFGVATSM--LVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSKD 269
           P  + +                E    +                   L  L GT    K+
Sbjct: 175 PNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTA--------------LQRL-GTQ---KE 216

Query: 270 IAEAALYLASDESRYVSGHNLVVDGG 295
           + E   +LAS    Y++G    + GG
Sbjct: 217 LGELVAFLASGSCDYLTGQVFWLAGG 242

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} Length = 281

 Score =  223 bits (570), Expect = 3e-72
 Identities = 69/279 (24%), Positives = 110/279 (39%), Gaps = 34/279 (12%)

Query: 23  PPSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADV-EDTLGSVLASTLAPAP-- 79
                  EG++A++TGG  G+G    +  +  G  VVI     D L +            
Sbjct: 25  AQGKGSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNI 84

Query: 80  VTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMR 139
           V  V CDV   + +  L  +  + + RLD+L NNAG          + +   ++++ ++ 
Sbjct: 85  VRAVVCDVGDPDQVAALFAAVRAEFARLDLLVNNAGS---NVPPVPLEEVTFEQWNGIVA 141

Query: 140 VNVKGMALGIKHAARVMINRG--GGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAA 197
            N+ G  L  +HA R+M  +   GG II+  S++          YTA+KHAI GLTK+ A
Sbjct: 142 ANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPRPNSAPYTATKHAITGLTKSTA 201

Query: 198 CELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGL 257
            +   + I    I     AT M                 M+ G+         E  +   
Sbjct: 202 LDGRMHDIACGQIDIGNAATDMT--------------ARMSTGVLQANGEVAAEPTI--- 244

Query: 258 GNLKGTTLRSKDIAEAALYLASD-ESRYVSGHNLVVDGG 295
                     + IAEA +Y+AS   S  V    ++    
Sbjct: 245 --------PIEHIAEAVVYMASLPLSANVLTMTVMATRM 275

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 Length = 263

 Score =  221 bits (565), Expect = 1e-71
 Identities = 90/270 (33%), Positives = 130/270 (48%), Gaps = 32/270 (11%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDV 87
           RL GK  ++TG A GIG AA+ LFAR GA +V  D E+ L +   + L  A    V  DV
Sbjct: 3   RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALE-AEAIAVVADV 61

Query: 88  SLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMAL 147
           S  + +E +    +  +GRL  + + AGV           +   + ++ V+RVN+ G  L
Sbjct: 62  SDPKAVEAVFAEALEEFGRLHGVAHFAGVA----HSALSWNLPLEAWEKVLRVNLTGSFL 117

Query: 148 GIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRV 207
             + A  V+    GG ++ T SVAG +G  G   Y A K  +VGL +  A EL R G+RV
Sbjct: 118 VARKAGEVL--EEGGSLVLTGSVAG-LGAFGLAHYAAGKLGVVGLARTLALELARKGVRV 174

Query: 208 NCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRS 267
           N + P  + T M       +G      E      P              LG   G     
Sbjct: 175 NVLLPGLIQTPMT------AGLPPWAWEQEVGASP--------------LGRA-GRP--- 210

Query: 268 KDIAEAALYLASDESRYVSGHNLVVDGGVT 297
           +++A+AAL+L S+ES Y++G  L VDGG +
Sbjct: 211 EEVAQAALFLLSEESAYITGQALYVDGGRS 240

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} Length = 257

 Score =  220 bits (562), Expect = 3e-71
 Identities = 79/273 (28%), Positives = 123/273 (45%), Gaps = 29/273 (10%)

Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL--APAPVTFVHCD 86
           ++ KV IITGG+ G+G+     FA+ GA+VVI              +   P  +  V  D
Sbjct: 4   MKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMD 63

Query: 87  VSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMA 146
           V   +DI+ +I     ++GR+DIL NNA   GN        D   + +++V+ + + G  
Sbjct: 64  VRNTDDIQKMIEQIDEKFGRIDILINNAA--GN--FICPAEDLSVNGWNSVINIVLNGTF 119

Query: 147 LGIKHAARVMINRG-GGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELG-RYG 204
              +   +  I +G  G II+  +      G G     A+K  ++ +TK  A E G +YG
Sbjct: 120 YCSQAIGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGVLAMTKTLAVEWGRKYG 179

Query: 205 IRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT 264
           IRVN I+P  +  +            EE  +     +P              LG L GT 
Sbjct: 180 IRVNAIAPGPIERTG---GADKLWISEEMAKRTIQSVP--------------LGRL-GTP 221

Query: 265 LRSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
              ++IA  A YL SDE+ Y++G  + +DGG  
Sbjct: 222 ---EEIAGLAYYLCSDEAAYINGTCMTMDGGQH 251

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* Length = 258

 Score =  220 bits (562), Expect = 3e-71
 Identities = 80/280 (28%), Positives = 130/280 (46%), Gaps = 37/280 (13%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADV--EDTLGSVLAS-TLAPAPVTFVH 84
            L+GK  +ITG ++GIG A  RLFAR GAKV +        +   +AS         F  
Sbjct: 4   DLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFA 63

Query: 85  CDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKG 144
            D++  E  + L++  V+++G +D+L NNAG L      K + + D   +D VM  N++ 
Sbjct: 64  ADLATSEACQQLVDEFVAKFGGIDVLINNAGGLV---GRKPLPEIDDTFYDAVMDANIRS 120

Query: 145 MALGIKHAARVMINRG-----GGCIISTASVAGVMGG-LGPHAYTASKHAIVGLTKNAAC 198
           + +  K A   +            +IST S+AG  GG  G   Y A+K  +  + KN   
Sbjct: 121 VVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGPGAGLYGAAKAFLHNVHKNWVD 180

Query: 199 ELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLG 258
              + G+R N +SP  V T+       ++   ++  + ++ GIP              +G
Sbjct: 181 FHTKDGVRFNIVSPGTVDTAF------HADKTQDVRDRISNGIP--------------MG 220

Query: 259 NLKGTTLRSKDIAEAALYLASDE-SRYVSGHNLVVDGGVT 297
              GT    +++A A L+ AS   S Y++G  L ++GG  
Sbjct: 221 RF-GTA---EEMAPAFLFFASHLASGYITGQVLDINGGQY 256

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* Length = 263

 Score =  219 bits (560), Expect = 6e-71
 Identities = 69/281 (24%), Positives = 114/281 (40%), Gaps = 31/281 (11%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADV-EDTLGSVLA--STLAPAPVTFVH 84
            + GKVA+ITG + GIG A    FA+ GA +V+     D L              V  V 
Sbjct: 4   GISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVA 63

Query: 85  CDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKG 144
            DV+  E ++ ++ S  S +G  DIL NNAG       +++I++   +++     + V  
Sbjct: 64  VDVATPEGVDAVVESVRSSFGGADILVNNAGT----GSNETIMEAADEKWQFYWELLVMA 119

Query: 145 MALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYG 204
                +     M  RGGG II  AS+  V        Y  +K A++  +K  A E+ +  
Sbjct: 120 AVRLARGLVPGMRARGGGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLATEVIKDN 179

Query: 205 IRVNCISPFGVATSMLVNAWRNSGDG------EEEDECMNFGIPSQKEVRKMEEFVSGLG 258
           IRVNCI+P  + T   +   +                  +   P ++             
Sbjct: 180 IRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKR-----------FA 228

Query: 259 NLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTS 299
                    +++A   ++L S+ + Y  G    VDGG+  +
Sbjct: 229 -------SPEELANFFVFLCSERATYSVGSAYFVDGGMLKT 262

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} Length = 272

 Score =  219 bits (560), Expect = 7e-71
 Identities = 66/267 (24%), Positives = 102/267 (38%), Gaps = 34/267 (12%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADV-EDTLGSVLASTLAPAPVTFVHCD 86
           +   K+AI+TG   G+G A     A  G  V +A    D L    A          V  D
Sbjct: 25  KTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAA--EIGDDALCVPTD 82

Query: 87  VSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMA 146
           V+  + +  L  +TV ++GR+D+L+NNAG          + D    ++  V+  N+ G  
Sbjct: 83  VTDPDSVRALFTATVEKFGRVDVLFNNAGT---GAPAIPMEDLTFAQWKQVVDTNLTGPF 139

Query: 147 LGIKHAARVMI--NRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYG 204
           L  + A RVM      GG II+  S++          YTA+KHAI GLTK+ + +   + 
Sbjct: 140 LCTQEAFRVMKAQEPRGGRIINNGSISATSPRPYSAPYTATKHAITGLTKSTSLDGRVHD 199

Query: 205 IRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT 264
           I    I      T M     +    G  +    +  I                       
Sbjct: 200 IACGQIDIGNADTPMA----QKMKAGVPQ---ADLSIKV------------------EPV 234

Query: 265 LRSKDIAEAALYLASD-ESRYVSGHNL 290
           +    +A A +Y+AS      V    +
Sbjct: 235 MDVAHVASAVVYMASLPLDANVQFMTI 261

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} Length = 255

 Score =  218 bits (557), Expect = 1e-70
 Identities = 77/275 (28%), Positives = 123/275 (44%), Gaps = 29/275 (10%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPA--PVTFVHC 85
            L GK A++TG ARG+G A     A  GA+V++ D+  TL +    TL         V  
Sbjct: 6   DLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAF 65

Query: 86  DVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGM 145
           DV+ E  IE   +   +    +DIL NNAG+    +  K +++ + + +  V+  N+   
Sbjct: 66  DVTDELAIEAAFSKLDAEGIHVDILINNAGI----QYRKPMVELELENWQKVIDTNLTSA 121

Query: 146 ALGIKHAARVMINRG-GGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYG 204
            L  + AA+ MI R  GG II+  S+           YTA+K  I  LT + A E  ++ 
Sbjct: 122 FLVSRSAAKRMIARNSGGKIINIGSLTSQAARPTVAPYTAAKGGIKMLTCSMAAEWAQFN 181

Query: 205 IRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT 264
           I+ N I P  + T M         + ++ D  +    PSQ+            G      
Sbjct: 182 IQTNAIGPGYILTDMNTALI----EDKQFDSWVKSSTPSQR-----------WGRP---- 222

Query: 265 LRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTS 299
              +++   A++L+S  S Y++G  + VDGG    
Sbjct: 223 ---EELIGTAIFLSSKASDYINGQIIYVDGGWLAV 254

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* Length = 258

 Score =  218 bits (557), Expect = 2e-70
 Identities = 65/275 (23%), Positives = 112/275 (40%), Gaps = 35/275 (12%)

Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADV------EDTLGSVLASTLAPAPVTF 82
            + K A++TG +RG+G+AA    A +G  +VI          +T   +         V  
Sbjct: 2   EQNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEK---LGVKVLV 58

Query: 83  VHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNV 142
           V  +V     I+ +       +GRLD+  NNA         + +++ +   +D  M +N 
Sbjct: 59  VKANVGQPAKIKEMFQQIDETFGRLDVFVNNAASG----VLRPVMELEETHWDWTMNINA 114

Query: 143 KGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGR 202
           K +    + AA++M   GGG I+S +S+  +           SK A+  LT+  A EL  
Sbjct: 115 KALLFCAQEAAKLMEKNGGGHIVSISSLGSIRYLENYTTVGVSKAALEALTRYLAVELSP 174

Query: 203 YGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKG 262
             I VN +S   + T  L +      + E+  E      P               G +  
Sbjct: 175 KQIIVNAVSGGAIDTDALKHFP----NREDLLEDARQNTP--------------AGRM-V 215

Query: 263 TTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
                KD+ +   +L S ++  + G  ++VDGG +
Sbjct: 216 EI---KDMVDTVEFLVSSKADMIRGQTIIVDGGRS 247

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* Length = 302

 Score =  219 bits (560), Expect = 2e-70
 Identities = 64/273 (23%), Positives = 114/273 (41%), Gaps = 29/273 (10%)

Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADV-EDTLGSVLA--STLAPAPVTFVHC 85
            +GKVA ITGG  G+G+    L +  GA+ VIA    D L +     S+     V  + C
Sbjct: 24  FQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQC 83

Query: 86  DVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGM 145
           DV   + ++N ++  +   G  +I+ NNA   GN            + +  +  + + G 
Sbjct: 84  DVRDPDMVQNTVSELIKVAGHPNIVINNAA--GN--FISPTERLSPNAWKTITDIVLNGT 139

Query: 146 ALGIKHAARVMI-NRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYG 204
           A       + +I  + G   +S  ++    G        ++K  +  ++K+ A E G+YG
Sbjct: 140 AFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAMSKSLAAEWGKYG 199

Query: 205 IRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT 264
           +R N I P  + T     A+         ++ M   IP  +           LG +    
Sbjct: 200 MRFNVIQPGPIKTKG---AFSRLDPTGTFEKEMIGRIPCGR-----------LGTV---- 241

Query: 265 LRSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
              +++A  A +L SD + +++G  +  DGG  
Sbjct: 242 ---EELANLAAFLCSDYASWINGAVIKFDGGEE 271

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} PDB: 3gdf_A Length = 267

 Score =  216 bits (553), Expect = 8e-70
 Identities = 71/279 (25%), Positives = 117/279 (41%), Gaps = 37/279 (13%)

Query: 28  RLEGKVAIITG--GARGIGEAAVRLFARHGAKVVIADV-EDTLGSVLASTLAPA---PVT 81
            L+GKV ++TG  G +G+G  A R  A  GA V I               L         
Sbjct: 17  SLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAK 76

Query: 82  FVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVN 141
              C V   E  E L+   V+ +G++D    NAG          I+D   + +++V++V+
Sbjct: 77  AYKCQVDSYESCEKLVKDVVADFGQIDAFIANAGAT----ADSGILDGSVEAWNHVVQVD 132

Query: 142 VKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPH--AYTASKHAIVGLTKNAACE 199
           + G     K        RG G ++ TAS++G +        +Y  +K   + + ++ A E
Sbjct: 133 LNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANFPQEQTSYNVAKAGCIHMARSLANE 192

Query: 200 LGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGN 259
              +  RVN ISP  + T +      +    +E  +  +  IP  ++             
Sbjct: 193 WRDF-ARVNSISPGYIDTGL------SDFVPKETQQLWHSMIPMGRD------------- 232

Query: 260 LKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT 298
             G     K++  A +Y ASD S Y +G +L++DGG TT
Sbjct: 233 --GLA---KELKGAYVYFASDASTYTTGADLLIDGGYTT 266

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 Length = 267

 Score =  216 bits (552), Expect = 1e-69
 Identities = 83/279 (29%), Positives = 126/279 (45%), Gaps = 36/279 (12%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAP---VTFVH 84
            L G+VA++TGG+RG+G    +  A  G  VV+A       S  A  L            
Sbjct: 18  DLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFR 77

Query: 85  CDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKG 144
           CDVS  E+++ L+ +   ++G+LD + N AG+     +     +F  DEF  V+ VN+ G
Sbjct: 78  CDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGIN----RRHPAEEFPLDEFRQVIEVNLFG 133

Query: 145 MALGIKHAARVMINRGGGCIISTASVAGVMGGL-GPHAYTASKHAIVGLTKNAACELGRY 203
                + A  ++       II+  S+      +    AY ASK  +  LTK  A E GRY
Sbjct: 134 TYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGGVASLTKALAKEWGRY 193

Query: 204 GIRVNCISPFGVATSM---LVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNL 260
           GIRVN I+P    T M   +           E+ + M   IP  +            G  
Sbjct: 194 GIRVNVIAPGWYRTKMTEAVF-------SDPEKLDYMLKRIPLGR-----------TGVP 235

Query: 261 KGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTS 299
                  +D+   A++LAS+E++YV+G  + VDGG T +
Sbjct: 236 -------EDLKGVAVFLASEEAKYVTGQIIFVDGGWTAN 267

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* Length = 277

 Score =  216 bits (552), Expect = 1e-69
 Identities = 70/270 (25%), Positives = 104/270 (38%), Gaps = 28/270 (10%)

Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADV-EDTLGSVLA--STLAPAPVTFVHC 85
           L  KVA ITGG  GIG     +F RHG   VIA      + +     +         +  
Sbjct: 25  LRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSM 84

Query: 86  DVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGM 145
           DV     +   ++  +  +GR+DIL N A   GN            + F  VM ++  G 
Sbjct: 85  DVRAPPAVMAAVDQALKEFGRIDILINCAA--GN--FLCPAGALSFNAFKTVMDIDTSGT 140

Query: 146 ALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGI 205
               +          GG I++  +  G  G        ++K A+  +T++ A E G   I
Sbjct: 141 FNVSRVLYEKFFRDHGGVIVNITATLGNRGQALQVHAGSAKAAVDAMTRHLAVEWGPQNI 200

Query: 206 RVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL 265
           RVN ++P  ++ +      R  G  +          P              L  L G   
Sbjct: 201 RVNSLAPGPISGTE---GLRRLGGPQASLSTKVTASP--------------LQRL-GNK- 241

Query: 266 RSKDIAEAALYLASDESRYVSGHNLVVDGG 295
              +IA + LYLAS  + YV+G  LV DGG
Sbjct: 242 --TEIAHSVLYLASPLASYVTGAVLVADGG 269

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 Length = 265

 Score =  215 bits (551), Expect = 2e-69
 Identities = 69/281 (24%), Positives = 105/281 (37%), Gaps = 39/281 (13%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPA---PVTFVH 84
               K  I+TGG RGIG A  R  A  GA V +          +   +            
Sbjct: 11  SFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQ 70

Query: 85  CDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKG 144
           CDVS  + +   I    +  G +  L  NAGV       K   +   ++F  V  VNV G
Sbjct: 71  CDVSNTDIVTKTIQQIDADLGPISGLIANAGVS----VVKPATELTHEDFAFVYDVNVFG 126

Query: 145 MALGIKHAARVMINR-GGGCIISTASVAGVM-------GGLGPHAYTASKHAIVGLTKNA 196
           +    +  A++ + +   G I+ T+S++  +       G L    Y +SK A   L K  
Sbjct: 127 VFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGL 186

Query: 197 ACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSG 256
           A E    GIRVN +SP  V T         +   ++  +     IP              
Sbjct: 187 AAEWASAGIRVNALSPGYVNTDQ------TAHMDKKIRDHQASNIP-------------- 226

Query: 257 LGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
           L          +++   A+ L SD + Y++G    +DGG  
Sbjct: 227 LNRF-AQP---EEMTGQAILLLSDHATYMTGGEYFIDGGQL 263

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Length = 251

 Score =  213 bits (545), Expect = 7e-69
 Identities = 47/276 (17%), Positives = 89/276 (32%), Gaps = 52/276 (18%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDV 87
               K  ++ GG+  +G   V+ F       +  D  +           P          
Sbjct: 19  SHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRE----------NPNADHSFTIKD 68

Query: 88  SLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMAL 147
           S EE+I+++I    S+  ++D     AG         +  D        ++ +N+     
Sbjct: 69  SGEEEIKSVIEKINSKSIKVDTFVCAAGG---WSGGNASSDEFLKSVKGMIDMNLYSAFA 125

Query: 148 GIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELG--RYGI 205
                A+++    GG  + T + A +    G  AY A+K A   + K+ A E G    G 
Sbjct: 126 SAHIGAKLL--NQGGLFVLTGASAALNRTSGMIAYGATKAATHHIIKDLASENGGLPAGS 183

Query: 206 RVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL 265
               I P  + T        N     + +                +++            
Sbjct: 184 TSLGILPVTLDTPT------NRKYMSDAN---------------FDDWT----------- 211

Query: 266 RSKDIAEAAL-YLASDESRYVSGHNLVVD--GGVTT 298
              ++AE    +  + +SR  +G  +  +    VTT
Sbjct: 212 PLSEVAEKLFEWSTNSDSRPTNGSLVKFETKSKVTT 247

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} Length = 281

 Score =  214 bits (546), Expect = 1e-68
 Identities = 78/276 (28%), Positives = 117/276 (42%), Gaps = 33/276 (11%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDV 87
           + EG  AI++GGA G+GEA VR     G  VVIAD+    G  LA  L      FV  +V
Sbjct: 27  QFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNR-AEFVSTNV 85

Query: 88  SLEEDIENLINSTVSRYGRLDILYNNAGVLGNQR-KHKSIIDFDADEFDNVMRVNVKGMA 146
           + E+ +   I +          +  + G    QR   +     D   F   + + + G  
Sbjct: 86  TSEDSVLAAIEAANQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTY 145

Query: 147 LGIKHAARVMI------NRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACEL 200
              +  A  +       N   G ++ TAS+AG  G +G  AY A+K  ++GLT  AA +L
Sbjct: 146 NVARLVAASIAAAEPRENGERGALVLTASIAGYEGQIGQTAYAAAKAGVIGLTIAAARDL 205

Query: 201 GRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNL 260
              GIRVN I+P  + T ++         GEE        IP          F   LG  
Sbjct: 206 SSAGIRVNTIAPGTMKTPIM------ESVGEEALAKFAANIP----------FPKRLG-- 247

Query: 261 KGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGV 296
                   + A+AA +L ++   Y++G  + +DG  
Sbjct: 248 -----TPDEFADAAAFLLTN--GYINGEVMRLDGAQ 276

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} Length = 273

 Score =  213 bits (545), Expect = 2e-68
 Identities = 75/273 (27%), Positives = 115/273 (42%), Gaps = 28/273 (10%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAP-APVTFVHCD 86
            L G+ A++TG   GIG A    +AR GA V+     D +  V             V  D
Sbjct: 28  SLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVKEVADEIADGGGSAEAVVAD 87

Query: 87  VSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMA 146
           ++  E   N+    ++   R+D+L NNAG+           +     +  V+ VN+    
Sbjct: 88  LADLEGAANVAE-ELAATRRVDVLVNNAGI----IARAPAEEVSLGRWREVLTVNLDAAW 142

Query: 147 LGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIR 206
           +  +     M+  G G I++ AS+    GG    AY ASKHA+VGLT+  A E    G+ 
Sbjct: 143 VLSRSFGTAMLAHGSGRIVTIASMLSFQGGRNVAAYAASKHAVVGLTRALASEWAGRGVG 202

Query: 207 VNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLR 266
           VN ++P  V T+       +    +E    +   IP+ +                     
Sbjct: 203 VNALAPGYVVTANTAALRAD----DERAAEITARIPAGR-----------WATP------ 241

Query: 267 SKDIAEAALYLASDESRYVSGHNLVVDGGVTTS 299
            +D+   A++LASD + YV G  L VDGG   S
Sbjct: 242 -EDMVGPAVFLASDAASYVHGQVLAVDGGWLAS 273

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* Length = 254

 Score =  211 bits (540), Expect = 5e-68
 Identities = 51/279 (18%), Positives = 88/279 (31%), Gaps = 44/279 (15%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVV-IADVEDTLGSV--LASTLAPAPVTFVH 84
            L  K  I      GIG    R   +   K   I D  +   ++  L +      +TF  
Sbjct: 2   DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHT 61

Query: 85  CDVSLE-EDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVK 143
            DV++   + + L+     +   +DIL N AG+L            D  + +  + +N  
Sbjct: 62  YDVTVPVAESKKLLKKIFDQLKTVDILINGAGIL------------DDHQIERTIAINFT 109

Query: 144 GMALGIKHAARVMINR---GGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACEL 200
           G+             R    GG I +  SV G         Y+ASK A+V  T + A   
Sbjct: 110 GLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSLAKLA 169

Query: 201 GRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNL 260
              G+    I+P    T ++           + +  +   + S                 
Sbjct: 170 PITGVTAYSINPGITRTPLV----HTFNSWLDVEPRVAELLLSHP--------------- 210

Query: 261 KGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTS 299
              T  S+   +  +          +G    +D G   +
Sbjct: 211 ---TQTSEQCGQNFVKAIEANK---NGAIWKLDLGTLEA 243

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} Length = 262

 Score =  211 bits (539), Expect = 1e-67
 Identities = 71/266 (26%), Positives = 108/266 (40%), Gaps = 37/266 (13%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVT--FVHC 85
            L G+VA++TG +RGIG A  R     GA+VV+   +      +   +  A        C
Sbjct: 26  SLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHAC 85

Query: 86  DVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGM 145
           D+S  + I       ++ +GR D+L NNAGV         +      E+D ++ VN+K  
Sbjct: 86  DLSHSDAIAAFATGVLAAHGRCDVLVNNAGVG---WFGGPLHTMKPAEWDALIAVNLKAP 142

Query: 146 ALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGI 205
            L ++  A  MI    G II+ +S+AG        AYTASK  + GL  +AA EL ++ +
Sbjct: 143 YLLLRAFAPAMIAAKRGHIINISSLAGKNPVADGAAYTASKWGLNGLMTSAAEELRQHQV 202

Query: 206 RVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL 265
           RV+ ++P  V T            G    +     I                        
Sbjct: 203 RVSLVAPGSVRTEFG--------VGLSAKKSALGAIEPD--------------------- 233

Query: 266 RSKDIAEAALYLASDESRYVSGHNLV 291
              DIA+    LA+   +      LV
Sbjct: 234 ---DIADVVALLATQADQSFISEVLV 256

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} Length = 254

 Score =  210 bits (536), Expect = 2e-67
 Identities = 58/270 (21%), Positives = 102/270 (37%), Gaps = 27/270 (10%)

Query: 31  GKVAIITGGARGIGEAAVRLFARHGAKVVIADV---EDTLGSVLASTLAPAPVTFVHCDV 87
           GKV ++TG +RGIG++ V +        V+  V   E  L  +           +V  D+
Sbjct: 2   GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEK--YGDRFFYVVGDI 59

Query: 88  SLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMAL 147
           + +  ++ L+N+ V  +G++D L  NAGVL      +++ + D + +  +  +N   +  
Sbjct: 60  TEDSVLKQLVNAAVKGHGKIDSLVANAGVL---EPVQNVNEIDVNAWKKLYDINFFSIVS 116

Query: 148 GIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRV 207
            +  A   +     G ++  +S A  M      AY +SK A+       A E     ++ 
Sbjct: 117 LVGIALPELKKT-NGNVVFVSSDACNMYFSSWGAYGSSKAALNHFAMTLANEE--RQVKA 173

Query: 208 NCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRS 267
             ++P  V T M VN   N G      E +      ++                   L S
Sbjct: 174 IAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLKEN---------------NQLLDS 218

Query: 268 KDIAEAALYLASDE-SRYVSGHNLVVDGGV 296
              A     LA       V+G  L  +   
Sbjct: 219 SVPATVYAKLALHGIPDGVNGQYLSYNDPA 248

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 Length = 303

 Score =  211 bits (540), Expect = 2e-67
 Identities = 69/277 (24%), Positives = 120/277 (43%), Gaps = 32/277 (11%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADV-EDTLGSVLA------STLAPAPV 80
            L+G+VAI+TGGA GIG+A V+     G+ VVIA    + L S              A V
Sbjct: 15  LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARV 74

Query: 81  TFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRV 140
             + C++  EE++ NL+ ST+  +G+++ L NN G  G            +  +  V+  
Sbjct: 75  IPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGG--GQ--FLSPAEHISSKGWHAVLET 130

Query: 141 NVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACEL 200
           N+ G     K      +   GG I++   V    G        A++  +  LTK+ A E 
Sbjct: 131 NLTGTFYMCKAVYSSWMKEHGGSIVNI-IVPTKAGFPLAVHSGAARAGVYNLTKSLALEW 189

Query: 201 GRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNL 260
              GIR+NC++P  + +            G+   E     IP+++           +G  
Sbjct: 190 ACSGIRINCVAPGVIYSQT--AVENYGSWGQSFFEGSFQKIPAKR-----------IG-- 234

Query: 261 KGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
                  ++++    +L S  + +++G ++ VDGG +
Sbjct: 235 -----VPEEVSSVVCFLLSPAASFITGQSVDVDGGRS 266

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A Length = 239

 Score =  208 bits (532), Expect = 5e-67
 Identities = 69/268 (25%), Positives = 107/268 (39%), Gaps = 35/268 (13%)

Query: 32  KVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEE 91
           + A++TGG+RGIG A        G +V IA                     +  D+  ++
Sbjct: 3   RKALVTGGSRGIGRAIAEALVARGYRVAIASRNP------EEAAQSLGAVPLPTDLE-KD 55

Query: 92  DIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKH 151
           D + L+   +   G L +L + A V       K  ++   +E+  V+ +++    L  + 
Sbjct: 56  DPKGLVKRALEALGGLHVLVHAAAVN----VRKPALELSYEEWRRVLYLHLDVAFLLAQA 111

Query: 152 AARVMINRGGGCIISTASVAGVMGGLGPH--AYTASKHAIVGLTKNAACELGRYGIRVNC 209
           AA  M   G G ++   SV     G      AYT +K A++GLT+  A E  R GIRVN 
Sbjct: 112 AAPHMAEAGWGRVLFIGSVTTFTAGGPVPIPAYTTAKTALLGLTRALAKEWARLGIRVNL 171

Query: 210 ISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSKD 269
           + P  V T              E  E +   IP  +                    R ++
Sbjct: 172 LCPGYVETEFT----LPLRQNPELYEPITARIPMGR-----------WA-------RPEE 209

Query: 270 IAEAALYLASDESRYVSGHNLVVDGGVT 297
           IA  A  L  DE+ Y++G  + VDGG  
Sbjct: 210 IARVAAVLCGDEAEYLTGQAVAVDGGFL 237

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} Length = 259

 Score =  208 bits (533), Expect = 8e-67
 Identities = 71/280 (25%), Positives = 120/280 (42%), Gaps = 39/280 (13%)

Query: 27  RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVI------ADVEDTLGSVLASTLAPAPV 80
           +R   +  ++ G  R IG A    FA+ GA VV+            +  +          
Sbjct: 4   QRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEK---LGRSA 60

Query: 81  TFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRV 140
             +  D++   ++E  I++   ++G +  L + AG L      K+I + D   +  V+ V
Sbjct: 61  LAIKADLTNAAEVEAAISAAADKFGEIHGLVHVAGGLI---ARKTIAEMDEAFWHQVLDV 117

Query: 141 NVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGL-GPHAYTASKHAIVGLTKNAACE 199
           N+  + L  K A   M    GG I++ +S AG  GG  G  AY  SK A++  T+  A E
Sbjct: 118 NLTSLFLTAKTALPKMAK--GGAIVTFSSQAGRDGGGPGALAYATSKGAVMTFTRGLAKE 175

Query: 200 LGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGN 259
           +G   IRVN + P  ++T+       ++    E  E +                   L  
Sbjct: 176 VGP-KIRVNAVCPGMISTTFH-----DTFTKPEVRERVAGATS--------------LKR 215

Query: 260 LKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTS 299
             G++   +D+A    +LASD++ YV+G    ++GGV  S
Sbjct: 216 E-GSS---EDVAGLVAFLASDDAAYVTGACYDINGGVLFS 251

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} Length = 274

 Score =  209 bits (534), Expect = 8e-67
 Identities = 63/279 (22%), Positives = 100/279 (35%), Gaps = 47/279 (16%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAP-------- 79
            L GK   ITG +RGIG A     AR GA V IA         L  T+  A         
Sbjct: 3   TLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGG 62

Query: 80  -VTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVM 138
               + CD+  E+ +   + +TV  +G +DIL NNA  +      +  +D     FD + 
Sbjct: 63  QGLALKCDIREEDQVRAAVAATVDTFGGIDILVNNASAI----WLRGTLDTPMKRFDLMQ 118

Query: 139 RVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMG-GLGPH-AYTASKHAIVGLTKNA 196
           +VN +G  +  +     ++      I++ A    +     G H  YT +K  +  +T   
Sbjct: 119 QVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAWWGAHTGYTLAKMGMSLVTLGL 178

Query: 197 ACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSG 256
           A E G  G+ +N + P  V  +    A       +          P              
Sbjct: 179 AAEFGPQGVAINALWPRTVIATD---AINMLPGVDAAA----CRRPE------------- 218

Query: 257 LGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
                        +A+AA  + + E+    G  L+ D  
Sbjct: 219 ------------IMADAAHAVLTREAAGFHGQFLIDDEV 245

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} Length = 262

 Score =  207 bits (529), Expect = 3e-66
 Identities = 81/277 (29%), Positives = 120/277 (43%), Gaps = 32/277 (11%)

Query: 23  PPSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAP--- 79
           P S   L+G+  ++TGG +GIG     +FAR GA V +A           + L       
Sbjct: 2   PGSMFDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGK 61

Query: 80  VTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMR 139
           V  V  DVS     + L    V  +G +D++  NAGV         +     ++ + +  
Sbjct: 62  VIGVQTDVSDRAQCDALAGRAVEEFGGIDVVCANAGVF----PDAPLATMTPEQLNGIFA 117

Query: 140 VNVKGMALGIKHAARVMINRGGGCIISTASVAG-VMGGLGPHAYTASKHAIVGLTKNAAC 198
           VNV G    ++     +I  G G ++ T+S+ G + G  G   Y A+K A +G  + AA 
Sbjct: 118 VNVNGTFYAVQACLDALIASGSGRVVLTSSITGPITGYPGWSHYGATKAAQLGFMRTAAI 177

Query: 199 ELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLG 258
           EL  + I VN I P  + T  L        +GEE    M   IP               G
Sbjct: 178 ELAPHKITVNAIMPGNIMTEGL------LENGEEYIASMARSIP--------------AG 217

Query: 259 NLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
            L GT    +DI   A +LA+ E+ Y++G  + VDGG
Sbjct: 218 AL-GTP---EDIGHLAAFLATKEAGYITGQAIAVDGG 250

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} Length = 280

 Score =  207 bits (530), Expect = 3e-66
 Identities = 67/280 (23%), Positives = 116/280 (41%), Gaps = 33/280 (11%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADV--EDTLGSVLAS-TLAPAPVTFVH 84
           +    VAI+TGG RGIG    R  A  G  + I  +   + +  V+A  +   A V F+ 
Sbjct: 26  QKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLR 85

Query: 85  CDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKG 144
            D++     +  +++ V+ +GR+D L NNAG+    R     +D   + FD ++ VN++G
Sbjct: 86  ADLADLSSHQATVDAVVAEFGRIDCLVNNAGIASIVRD--DFLDLKPENFDTIVGVNLRG 143

Query: 145 MALGIKHAARVMI---NRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELG 201
                +   + M+    R    II+  SV+ VM       Y  SK  +   ++  A  L 
Sbjct: 144 TVFFTQAVLKAMLASDARASRSIINITSVSAVMTSPERLDYCMSKAGLAAFSQGLALRLA 203

Query: 202 RYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFG-IPSQKEVRKMEEFVSGLGNL 260
             GI V  + P  + + M       +    + D  +  G +P ++            G  
Sbjct: 204 ETGIAVFEVRPGIIRSDM------TAAVSGKYDGLIESGLVPMRR-----------WG-- 244

Query: 261 KGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTSR 300
                  +DI      LA  +  + +G  +  DGG++  R
Sbjct: 245 -----EPEDIGNIVAGLAGGQFGFATGSVIQADGGLSIGR 279

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} Length = 301

 Score =  208 bits (531), Expect = 4e-66
 Identities = 58/212 (27%), Positives = 104/212 (49%), Gaps = 7/212 (3%)

Query: 27  RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADV-EDTLGSVLAS-TLAPAPVTFVH 84
              +G+ A++TGGA GIG A    FAR GA++V++DV +  L   +            V 
Sbjct: 27  SGFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVV 86

Query: 85  CDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKG 144
           CDV   +++  L +      G +D++++NAG++        +   + D++  V+ +++ G
Sbjct: 87  CDVRHLDEMVRLADEAFRLLGGVDVVFSNAGIVVAGP----LAQMNHDDWRWVIDIDLWG 142

Query: 145 MALGIKHAARVMINRG-GGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRY 203
               ++     ++ +G GG I  TAS AG++   G   Y  +K+ +VGL +  A E+   
Sbjct: 143 SIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAGLGTYGVAKYGVVGLAETLAREVKPN 202

Query: 204 GIRVNCISPFGVATSMLVNAWRNSGDGEEEDE 235
           GI V+ + P  V T ++ N+ R  G       
Sbjct: 203 GIGVSVLCPMVVETKLVSNSERIRGADYGMSA 234

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} Length = 285

 Score =  206 bits (526), Expect = 1e-65
 Identities = 62/282 (21%), Positives = 99/282 (35%), Gaps = 45/282 (15%)

Query: 24  PSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPA----- 78
           P    L GK   I+GG+RGIG A  +  A  GA V +          L  T+  A     
Sbjct: 2   PGSMSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIE 61

Query: 79  ----PVTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEF 134
                   +  D+   + +   +  TV ++G +DI  NNA  +       SI +     F
Sbjct: 62  EAGGQALPIVGDIRDGDAVAAAVAKTVEQFGGIDICVNNASAI----NLGSIEEVPLKRF 117

Query: 135 DNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGG-LGPHAYTASKHAIVGLT 193
           D +  + V+G     +     M  R    I++ +    +    L P  Y  +K+ +    
Sbjct: 118 DLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPKWLRPTPYMMAKYGMTLCA 177

Query: 194 KNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEF 253
              A EL   GI  N + P     +    A +N   G+E          +    RK E  
Sbjct: 178 LGIAEELRDAGIASNTLWPRTTVATA---AVQNLLGGDE----------AMARSRKPEV- 223

Query: 254 VSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
                            A+AA  + +  S Y  G+ L+ +  
Sbjct: 224 ----------------YADAAYVVLNKPSSYT-GNTLLCEDV 248

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} Length = 262

 Score =  203 bits (520), Expect = 6e-65
 Identities = 63/282 (22%), Positives = 104/282 (36%), Gaps = 41/282 (14%)

Query: 25  SHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVI--------ADVEDTLGSVLASTLA 76
            +  L+ KV +I GG + +G    + FA     +V+                 +      
Sbjct: 5   KYHDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELED---Q 61

Query: 77  PAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDN 136
            A V     D+S EE++  L +     +G++DI  N  G +      K I++    EFD 
Sbjct: 62  GAKVALYQSDLSNEEEVAKLFDFAEKEFGKVDIAINTVGKV----LKKPIVETSEAEFDA 117

Query: 137 VMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNA 196
           +  +N K     IK AA+ M     G II+ A+            Y  +K  +   T+ A
Sbjct: 118 MDTINNKVAYFFIKQAAKHM--NPNGHIITIATSLLAAYTGFYSTYAGNKAPVEHYTRAA 175

Query: 197 ACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSG 256
           + EL +  I VN I+P  + TS          + +E                        
Sbjct: 176 SKELMKQQISVNAIAPGPMDTSFFYG-----QETKESTAFHKSQAM-------------- 216

Query: 257 LGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT 298
              L       +DIA    +L +D   +++G  +  +GG TT
Sbjct: 217 GNQL-TKI---EDIAPIIKFLTTD-GWWINGQTIFANGGYTT 253

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} Length = 276

 Score =  204 bits (521), Expect = 6e-65
 Identities = 68/276 (24%), Positives = 113/276 (40%), Gaps = 32/276 (11%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADV-EDTLGSVLASTLAPAPVTFVHCD 86
            L G++A++TGG+RGIG+   +     GA+V I     +          A      +  D
Sbjct: 26  SLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAIPAD 85

Query: 87  VSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMA 146
           +S E     L  +      RLDIL NNAG         ++  +    ++ VM++NV  + 
Sbjct: 86  LSSEAGARRLAQALGELSARLDILVNNAGT----SWGAALESYPVSGWEKVMQLNVTSVF 141

Query: 147 LGIKHAARVM----INRGGGCIISTASVAGVMG-GLGPHAYTASKHAIVGLTKNAACELG 201
             I+    ++           +I+  SVAG+   G   +AY  SK A+  L++  A EL 
Sbjct: 142 SCIQQLLPLLRRSASAENPARVINIGSVAGISAMGEQAYAYGPSKAALHQLSRMLAKELV 201

Query: 202 RYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLK 261
              I VN I+P    + M  +   +    E      +  IP  +            G   
Sbjct: 202 GEHINVNVIAPGRFPSRMTRHIANDPQALEA----DSASIPMGR-----------WG--- 243

Query: 262 GTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
               R +++A  A+ LA     Y++G+ + +DGG  
Sbjct: 244 ----RPEEMAALAISLAGTAGAYMTGNVIPIDGGFH 275

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} Length = 294

 Score =  204 bits (521), Expect = 1e-64
 Identities = 70/280 (25%), Positives = 114/280 (40%), Gaps = 43/280 (15%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIA-------DVEDTLGSVLASTLAPAPV 80
           RL+ + A++TGG  GIG AA   +AR GA V I        D +     +          
Sbjct: 46  RLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEE---CGRKA 102

Query: 81  TFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRV 140
             +  D+S E    +L++      G LDIL   AG    Q     I D  +++F     V
Sbjct: 103 VLLPGDLSDESFARSLVHKAREALGGLDILALVAGK---QTAIPEIKDLTSEQFQQTFAV 159

Query: 141 NVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACEL 200
           NV  +    + A  ++    G  II+T+S+           Y A+K AI+  ++  A ++
Sbjct: 160 NVFALFWITQEAIPLL--PKGASIITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQV 217

Query: 201 GRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNL 260
              GIRVN ++P  + T++ ++     G  +++        P              +   
Sbjct: 218 AEKGIRVNIVAPGPIWTALQISG----GQTQDKIPQFGQQTP--------------MK-- 257

Query: 261 KGTTLRS---KDIAEAALYLASDESRYVSGHNLVVDGGVT 297
                R+    ++A   +YLAS ES YV+     V GG  
Sbjct: 258 -----RAGQPAELAPVYVYLASQESSYVTAEVHGVCGGEH 292

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* Length = 283

 Score =  203 bits (518), Expect = 3e-64
 Identities = 74/288 (25%), Positives = 118/288 (40%), Gaps = 41/288 (14%)

Query: 24  PSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVI-------------ADVEDTLGSV 70
           P    LEGKVA++TG  RGIG        R G KV++             A ++      
Sbjct: 22  PQSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDA 81

Query: 71  LASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFD 130
                       V  +V + EDI  +    V  +G+LDI+ +N+GV+        + D  
Sbjct: 82  AC----------VKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVV----SFGHVKDVT 127

Query: 131 ADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHA-YTASKHAI 189
            +EFD V  +N +G     + A + +    GG +I   S+ G    +  HA Y+ SK AI
Sbjct: 128 PEEFDRVFTINTRGQFFVAREAYKHL--EIGGRLILMGSITGQAKAVPKHAVYSGSKGAI 185

Query: 190 VGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRK 249
               +  A ++    I VN ++P G+ T M            E           + +   
Sbjct: 186 ETFARCMAIDMADKKITVNVVAPGGIKTDM------YHAVCREYIPNGENLSNEEVDEYA 239

Query: 250 MEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
             ++ S L  + G      DIA    +LAS++  +V+G  + +DGG  
Sbjct: 240 AVQW-SPLRRV-GLP---IDIARVVCFLASNDGGWVTGKVIGIDGGAC 282

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* Length = 291

 Score =  202 bits (517), Expect = 4e-64
 Identities = 80/281 (28%), Positives = 128/281 (45%), Gaps = 47/281 (16%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIA------DVEDTLGSVLASTLAPAPVT 81
           +L+GK  +ITGG  GIG A    FA+ GA + IA      D  +T   V           
Sbjct: 44  KLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEK---EGVKCV 100

Query: 82  FVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVN 141
            +  D+S E+  ++++  TV + G L+IL NN      Q   + +    A++ +   R+N
Sbjct: 101 LLPGDLSDEQHCKDIVQETVRQLGSLNILVNNVAQ---QYPQQGLEYITAEQLEKTFRIN 157

Query: 142 VKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELG 201
           +       K A   +  + G  II+TAS+    G      Y+A+K AIV  T++ +  L 
Sbjct: 158 IFSYFHVTKAALSHL--KQGDVIINTASIVAYEGNETLIDYSATKGAIVAFTRSLSQSLV 215

Query: 202 RYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSG--LGN 259
           + GIRVN ++P  + T +                     IPS  + +K+ +F S   +  
Sbjct: 216 QKGIRVNGVAPGPIWTPL---------------------IPSSFDEKKVSQFGSNVPMQ- 253

Query: 260 LKGTTLRS---KDIAEAALYLASDESRYVSGHNLVVDGGVT 297
                 R     ++A A +YLAS +S YV+G  + V+GGV 
Sbjct: 254 ------RPGQPYELAPAYVYLASSDSSYVTGQMIHVNGGVI 288

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... Length = 288

 Score =  201 bits (514), Expect = 1e-63
 Identities = 70/294 (23%), Positives = 111/294 (37%), Gaps = 49/294 (16%)

Query: 24  PSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVI------ADVEDTLGSVLASTLAP 77
           P    +E   A++TG A+ IG A      + G +VVI               +       
Sbjct: 16  PRGSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKE--RS 73

Query: 78  APVTFVHCDVS----LEEDIENLINSTVSRYGRLDILYNNAGV------LGNQRKHKSII 127
                   D++    L    E +INS    +GR D+L NNA        +    +  S  
Sbjct: 74  NTAVVCQADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNG 133

Query: 128 DFDADEFDNVMRVNVKGMALGIKHAARVM------INRGGGCIISTASVAGVMGGLGPHA 181
                +   ++  N     L     A+               I++          +    
Sbjct: 134 KTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSL 193

Query: 182 YTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGI 241
           Y   KHA+VGLT++AA EL  YGIRVN ++P G  + + V        GEEE +     +
Sbjct: 194 YNMGKHALVGLTQSAALELAPYGIRVNGVAP-G-VSLLPVAM------GEEEKDKWRRKV 245

Query: 242 PSQKEVRKMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
           P              LG  + +    + IA+A ++L S  ++Y++G  + VDGG
Sbjct: 246 P--------------LGRREASA---EQIADAVIFLVSGSAQYITGSIIKVDGG 282

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} Length = 260

 Score =  200 bits (511), Expect = 1e-63
 Identities = 53/271 (19%), Positives = 89/271 (32%), Gaps = 37/271 (13%)

Query: 25  SHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVH 84
            H  L     +ITG ++ +G         HG +V+I+   +       + L  A    ++
Sbjct: 21  GHMTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTE---HASVTELRQAGAVALY 77

Query: 85  CDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKG 144
            D S E  I   I+   ++   L  + +NA               +AD F  +  V++  
Sbjct: 78  GDFSCETGIMAFIDLLKTQTSSLRAVVHNASEW-----LAETPGEEADNFTRMFSVHMLA 132

Query: 145 MALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYG 204
             L   H   ++       I+  +      G     AY A+K  +  LT + A       
Sbjct: 133 PYLINLHCEPLLTASEVADIVHISDDVTRKGSSKHIAYCATKAGLESLTLSFAARFAP-L 191

Query: 205 IRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT 264
           ++VN I+P  +             D                           LG      
Sbjct: 192 VKVNGIAPALLMFQPK--------DDAAYRANALAKSA--------------LGIE-PGA 228

Query: 265 LRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
              + I ++  YL    S YV+G  L V+GG
Sbjct: 229 ---EVIYQSLRYLLD--STYVTGTTLTVNGG 254

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} Length = 255

 Score =  200 bits (510), Expect = 1e-63
 Identities = 53/271 (19%), Positives = 84/271 (30%), Gaps = 30/271 (11%)

Query: 32  KVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEE 91
            V  ITG A GIG A   L AR G  V+  D          ST      T V   +    
Sbjct: 2   SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEADLSTPG-GRETAVAAVLDRCG 60

Query: 92  D-----IENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMA 146
                 +        +    L +  N  GV                +    + V      
Sbjct: 61  GVLDGLVCCAGVGVTAANSGLVVAVNYFGVSALLDG--LAEALSRGQQPAAVIVGSIAAT 118

Query: 147 LGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIR 206
                   ++     G       +A    G    AY  SK+A+  L +    +    G+R
Sbjct: 119 QPGAAELPMVEAMLAGDEARAIELAEQ-QGQTHLAYAGSKYAVTCLARRNVVDWAGRGVR 177

Query: 207 VNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLR 266
           +N ++P  V T +L  +     D    +    F  P           +            
Sbjct: 178 LNVVAPGAVETPLLQASK---ADPRYGESTRRFVAP-----------LGRGS-------E 216

Query: 267 SKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
            +++AEA  +L   ++ ++ G  L VDGG+ 
Sbjct: 217 PREVAEAIAFLLGPQASFIHGSVLFVDGGMD 247

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} Length = 293

 Score =  201 bits (514), Expect = 1e-63
 Identities = 83/272 (30%), Positives = 119/272 (43%), Gaps = 32/272 (11%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAP---VTFVH 84
            L  +  ++TGG +GIG     +FAR GA V +A       S + + L       V  V 
Sbjct: 38  DLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVR 97

Query: 85  CDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKG 144
            DVS      +   + V  +G LD++  NAG+         +     ++   V+ VNVKG
Sbjct: 98  LDVSDPGSCADAARTVVDAFGALDVVCANAGIF----PEARLDTMTPEQLSEVLDVNVKG 153

Query: 145 MALGIKHAARVMINRGGGCIISTASVAG-VMGGLGPHAYTASKHAIVGLTKNAACELGRY 203
               ++     +   G G +I T+S+ G V G  G   Y ASK A +G  + AA EL   
Sbjct: 154 TVYTVQACLAPLTASGRGRVILTSSITGPVTGYPGWSHYGASKAAQLGFMRTAAIELAPR 213

Query: 204 GIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGT 263
           G+ VN I P  + T  L         GEE    M   IP              +G L G+
Sbjct: 214 GVTVNAILPGNILTEGL------VDMGEEYISGMARSIP--------------MGML-GS 252

Query: 264 TLRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
                DI   A +LA+DE+ Y++G  +VVDGG
Sbjct: 253 P---VDIGHLAAFLATDEAGYITGQAIVVDGG 281

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 Length = 274

 Score =  200 bits (512), Expect = 1e-63
 Identities = 77/288 (26%), Positives = 122/288 (42%), Gaps = 41/288 (14%)

Query: 22  APPSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVI-------------ADVEDTLG 68
              + + L GKVA+ TG  RGIG        R GA VV+             A+++    
Sbjct: 12  PSDASKPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGA 71

Query: 69  SVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIID 128
             +A          +  D+S   ++  L +  VS +G LD + +N+G+          ++
Sbjct: 72  QGVA----------IQADISKPSEVVALFDKAVSHFGGLDFVMSNSGME----VWCDELE 117

Query: 129 FDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHA-YTASKH 187
              + FD V  +N +G     +   +    R GG II T+S+A VM G+  HA Y  SK 
Sbjct: 118 VTQELFDKVFNLNTRGQFFVAQQGLKHC--RRGGRIILTSSIAAVMTGIPNHALYAGSKA 175

Query: 188 AIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEV 247
           A+ G  +  A + G  G+ VNCI+P GV T M         +          G+P +K  
Sbjct: 176 AVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDM------FDENSWHYAPGGYKGMPQEKID 229

Query: 248 RKMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
             +    + L  + G      DI  A   L  +ES +++G  + + GG
Sbjct: 230 EGLANM-NPLKRI-GYP---ADIGRAVSALCQEESEWINGQVIKLTGG 272

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* Length = 247

 Score =  198 bits (507), Expect = 4e-63
 Identities = 71/270 (26%), Positives = 119/270 (44%), Gaps = 29/270 (10%)

Query: 27  RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCD 86
            RL GK A++TG A+GIG+A     A  GA V+++D+        A+++       +  D
Sbjct: 2   ERLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIG-KKARAIAAD 60

Query: 87  VSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMA 146
           +S    ++ L     +  G +DIL NNA ++       +  D D D +  ++ VN+ G  
Sbjct: 61  ISDPGSVKALFAEIQALTGGIDILVNNASIV----PFVAWDDVDLDHWRKIIDVNLTGTF 116

Query: 147 LGIKHAARVMINRG-GGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGI 205
           +  +     M   G  G +IS AS     G     AY A+K  ++G T+  A ELG+Y I
Sbjct: 117 IVTRAGTDQMRAAGKAGRVISIASNTFFAGTPNMAAYVAAKGGVIGFTRALATELGKYNI 176

Query: 206 RVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL 265
             N ++P  + +  +  +                      E     E +  +    G   
Sbjct: 177 TANAVTPGLIESDGVKAS-------------------PHNEAFGFVEMLQAMKGK-GQP- 215

Query: 266 RSKDIAEAALYLASDESRYVSGHNLVVDGG 295
             + IA+   +LASD++R+++G  L VD G
Sbjct: 216 --EHIADVVSFLASDDARWITGQTLNVDAG 243

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} Length = 272

 Score =  199 bits (509), Expect = 4e-63
 Identities = 80/287 (27%), Positives = 125/287 (43%), Gaps = 53/287 (18%)

Query: 26  HRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVI-------------ADVEDTLGSVLA 72
               +  V ++TGG+RGIG A  RL AR G +V +             A + ++ G  +A
Sbjct: 21  QSMSDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVA 80

Query: 73  STLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDAD 132
                     +  DV    DI  + ++   ++GRLD L NNAG++      + + +   +
Sbjct: 81  ----------IPGDVGNAADIAAMFSAVDRQFGRLDGLVNNAGIVDYP---QRVDEMSVE 127

Query: 133 EFDNVMRVNVKGMALGIKHAARVMINRG---GGCIISTASVAGVMGGLGPHA-YTASKHA 188
             + ++RVNV G  L    A R M       GG I++ +S+A ++G    +  Y ASK A
Sbjct: 128 RIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSATQYVDYAASKAA 187

Query: 189 IVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVR 248
           I   T   A E+   GIRVN + P  + T +       SG   +    M   +P      
Sbjct: 188 IDTFTIGLAREVAAEGIRVNAVRPGIIETDLH-----ASGGLPDRAREMAPSVP------ 236

Query: 249 KMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
                   +    G     +++A+A LYL S  + YV+G  L V GG
Sbjct: 237 --------MQRA-GMP---EEVADAILYLLSPSASYVTGSILNVSGG 271

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* Length = 276

 Score =  198 bits (506), Expect = 1e-62
 Identities = 70/300 (23%), Positives = 112/300 (37%), Gaps = 49/300 (16%)

Query: 23  PPSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVI------ADVEDTLGSVLASTLA 76
             SH   E   A+ITGGAR IG +      + G +VV+         +  +  + A    
Sbjct: 3   ETSHEASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNA--AR 60

Query: 77  PAPVTFVHCDVSLEEDI----ENLINSTVSRYGRLDILYNNAGV-------LGNQRKHKS 125
                    D+SL   +    E++I+ +   +GR D+L NNA          G+     +
Sbjct: 61  AGSAVLCKGDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAA 120

Query: 126 IIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGG-----GCIISTASVAGVMGGLGPH 180
                  +   +   N       I+  AR     G        +++       +   G  
Sbjct: 121 DAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFC 180

Query: 181 AYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFG 240
            YT +KHA+ GLT+ AA EL    IRVN ++P                  +E  E     
Sbjct: 181 VYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPP--------AMPQETQEEYRRK 232

Query: 241 IPSQKEVRKMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTSR 300
           +P              LG  + +      IA+A  +L S ++ Y++G  L VDGG+  +R
Sbjct: 233 VP--------------LGQSEASA---AQIADAIAFLVSKDAGYITGTTLKVDGGLILAR 275

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A Length = 270

 Score =  197 bits (502), Expect = 4e-62
 Identities = 73/289 (25%), Positives = 120/289 (41%), Gaps = 42/289 (14%)

Query: 21  DAPPSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVI-------------ADVEDTL 67
                  RL+GKVA++TG  RGIG A      R GAKVV+             ++++   
Sbjct: 8   SETYIPGRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALG 67

Query: 68  GSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSII 127
              +A          +  D+    +I  L +  V+ +G LDI  +N+GV+        + 
Sbjct: 68  SDAIA----------IKADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVV----SFGHLK 113

Query: 128 DFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHA-YTASK 186
           D   +EFD V  +N +G     + A R +    GG I+ T+S       +  H+ Y+ SK
Sbjct: 114 DVTEEEFDRVFSLNTRGQFFVAREAYRHL--TEGGRIVLTSSNTSKDFSVPKHSLYSGSK 171

Query: 187 HAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKE 246
            A+    +  + + G   I VN ++P G  T M      +                + ++
Sbjct: 172 GAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTS--------YTAEQ 223

Query: 247 VRKMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
            ++M    S L    G     +D+A    +L S E  +V+G  L +DGG
Sbjct: 224 RQQMAAHASPLHRN-GWP---QDVANVVGFLVSKEGEWVNGKVLTLDGG 268

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} Length = 264

 Score =  196 bits (501), Expect = 5e-62
 Identities = 66/275 (24%), Positives = 112/275 (40%), Gaps = 31/275 (11%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADV-EDTLGSVLASTLAPAPVT--FVH 84
               + A+IT G +G+G+         G  V +    + T    +  T         FV 
Sbjct: 4   GRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQ 63

Query: 85  CDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKG 144
            DV+ +ED+  ++   +S +G++D L NNAG      + K ++D++ DE++ +++ N+  
Sbjct: 64  ADVTKKEDLHKIVEEAMSHFGKIDFLINNAGPYVF--ERKKLVDYEEDEWNEMIQGNLTA 121

Query: 145 MALGIKHAARVMINRGGGCII--STASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGR 202
           +   +K    VM  +  G II           G +   A+ A+K  +V LTK  A E   
Sbjct: 122 VFHLLKLVVPVMRKQNFGRIINYGFQGADSAPGWIYRSAFAAAKVGLVSLTKTVAYEEAE 181

Query: 203 YGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKG 262
           YGI  N + P  +   M           +E  +      P              +G   G
Sbjct: 182 YGITANMVCPGDIIGEM------KEATIQEARQLKEHNTP--------------IGRS-G 220

Query: 263 TTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
           T    +DIA    +L  D+S  ++G  + V G V 
Sbjct: 221 TG---EDIARTISFLCEDDSDMITGTIIEVTGAVD 252

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Length = 279

 Score =  197 bits (502), Expect = 6e-62
 Identities = 76/285 (26%), Positives = 111/285 (38%), Gaps = 31/285 (10%)

Query: 20  DDAPPSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPA- 78
              P        + A +TG + GIG A  R  A  G  V     +    S     L  A 
Sbjct: 13  GLVPRGSHMSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAG 72

Query: 79  -PVTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNV 137
             V    CDV+  +++   + + V R+G + IL N+AG  G         D D   + +V
Sbjct: 73  HDVDGSSCDVTSTDEVHAAVAAAVERFGPIGILVNSAGRNGGGE----TADLDDALWADV 128

Query: 138 MRVNVKGMALGIKHAARV--MINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKN 195
           +  N+ G+    +   R   M   G G I++ AS  G  G +    YTASKH +VG TK+
Sbjct: 129 LDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGVMYAAPYTASKHGVVGFTKS 188

Query: 196 AACELGRYGIRVNCISPFGVATSML-----VNAWRNSGDGEEEDECMNFGIPSQKEVRKM 250
              EL + GI VN + P  V T M        A       +E  E  N  IP  +     
Sbjct: 189 VGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIPLGR----- 243

Query: 251 EEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
                            +++A    YL +D +  ++   L V GG
Sbjct: 244 ------YS-------TPEEVAGLVGYLVTDAAASITAQALNVCGG 275

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* Length = 265

 Score =  196 bits (500), Expect = 6e-62
 Identities = 78/281 (27%), Positives = 123/281 (43%), Gaps = 34/281 (12%)

Query: 24  PSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFV 83
            + R ++G VA+ITGGA G+G A        GA  V+ D+ ++ G   A  L      F 
Sbjct: 5   AACRSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNN-CVFA 63

Query: 84  HCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQR--KHKSIIDFDADEFDNVMRVN 141
             DV+ E+D++  +     ++GR+D+  N AG+    +    K       ++F  V+ VN
Sbjct: 64  PADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVN 123

Query: 142 VKGMALGIKHAARVMI------NRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKN 195
           + G    I+  A  M           G II+TASVA   G +G  AY+ASK  IVG+T  
Sbjct: 124 LMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLP 183

Query: 196 AACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVS 255
            A +L   GIRV  I+P    T +L      +   E+    +   +P    +    E+  
Sbjct: 184 IARDLAPIGIRVMTIAPGLFGTPLL------TSLPEKVCNFLASQVPFPSRLGDPAEY-- 235

Query: 256 GLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGV 296
                            A L  A  E+ +++G  + +DG +
Sbjct: 236 -----------------AHLVQAIIENPFLNGEVIRLDGAI 259

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 245

 Score =  195 bits (499), Expect = 6e-62
 Identities = 88/268 (32%), Positives = 128/268 (47%), Gaps = 32/268 (11%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDV 87
           RL+ K  +ITG A GIG A + LFA+ GA++V  D+E+     L           V  DV
Sbjct: 2   RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEE---GPLREAAEAVGAHPVVMDV 58

Query: 88  SLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMAL 147
           +    +E      ++  GRLD + + AG+     +         ++++ V+RVN+ G  L
Sbjct: 59  ADPASVERGFAEALAHLGRLDGVVHYAGIT----RDNFHWKMPLEDWELVLRVNLTGSFL 114

Query: 148 GIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRV 207
             K A+  M  +  G I+ TAS    +G LG   Y AS   +VGLT+  A ELGR+GIRV
Sbjct: 115 VAKAASEAMREKNPGSIVLTASRVY-LGNLGQANYAASMAGVVGLTRTLALELGRWGIRV 173

Query: 208 NCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRS 267
           N ++P  + T M       +   E+  E      P              LG   G     
Sbjct: 174 NTLAPGFIETRMT------AKVPEKVREKAIAATP--------------LGRA-GKP--- 209

Query: 268 KDIAEAALYLASDESRYVSGHNLVVDGG 295
            ++A AAL+L SDES +++G  L VDGG
Sbjct: 210 LEVAYAALFLLSDESSFITGQVLFVDGG 237

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} Length = 257

 Score =  195 bits (499), Expect = 8e-62
 Identities = 78/275 (28%), Positives = 125/275 (45%), Gaps = 32/275 (11%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDV 87
           +L+ +V I+TG + G+G A  R+ A+ GA V+  D++   G   A+ L  A V F + DV
Sbjct: 4   QLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAA-VRFRNADV 62

Query: 88  SLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMAL 147
           + E D    +      +G +  L N AG    ++          D F   + VN+ G   
Sbjct: 63  TNEADATAALAFAKQEFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFN 122

Query: 148 GIKHAARVMINR------GGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELG 201
            I+ AA VM           G I++TAS+A   G +G  AY ASK  +  LT  AA EL 
Sbjct: 123 MIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQIGQAAYAASKGGVAALTLPAARELA 182

Query: 202 RYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLK 261
           R+GIRV  I+P    T M+      +G  ++  + +   +P          F   LG   
Sbjct: 183 RFGIRVVTIAPGIFDTPMM------AGMPQDVQDALAASVP----------FPPRLG--- 223

Query: 262 GTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGV 296
               R+++ A    ++   E+  ++G  + +DG +
Sbjct: 224 ----RAEEYAALVKHIC--ENTMLNGEVIRLDGAL 252

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* Length = 277

 Score =  196 bits (500), Expect = 8e-62
 Identities = 75/277 (27%), Positives = 112/277 (40%), Gaps = 31/277 (11%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPA--PVTFVHC 85
             + +VA++TG   GIG    R   + G +V +    +         L  A        C
Sbjct: 19  TQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTC 78

Query: 86  DVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGM 145
           DV    +IE L+ + V RYG +D+L NNAG  G         +   + + +V+  N+ G+
Sbjct: 79  DVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGA----TAELADELWLDVVETNLTGV 134

Query: 146 ALGIKHAARV--MINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRY 203
               K   +   M+ RG G I++ AS  G  G +    Y+ASKH +VG TK    EL R 
Sbjct: 135 FRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELART 194

Query: 204 GIRVNCISPFGVATSM-----LVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLG 258
           GI VN + P  V T M        +       EE  + +   +P              +G
Sbjct: 195 GITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVP--------------IG 240

Query: 259 NLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
                     ++AE   YL    +  V+   L V GG
Sbjct: 241 RY-VQP---SEVAEMVAYLIGPGAAAVTAQALNVCGG 273

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} Length = 271

 Score =  196 bits (500), Expect = 9e-62
 Identities = 86/287 (29%), Positives = 125/287 (43%), Gaps = 55/287 (19%)

Query: 25  SHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVI-------------ADVEDTLGSVL 71
           +   L GK A +TGG+RGIG A  +  A  GA V +             +++E   G  +
Sbjct: 25  TSISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAV 84

Query: 72  ASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDA 131
           A          +  D    E IE  I  TV   G LDIL N+AG+         + +   
Sbjct: 85  A----------IRADNRDAEAIEQAIRETVEALGGLDILVNSAGIW----HSAPLEETTV 130

Query: 132 DEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTAS-VAGVMGGLGPHAYTASKHAIV 190
            +FD VM VN +   + I+ A+R +    GG II+  S +A ++   G   Y+ASK A+ 
Sbjct: 131 ADFDEVMAVNFRAPFVAIRSASRHL--GDGGRIITIGSNLAELVPWPGISLYSASKAALA 188

Query: 191 GLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKM 250
           GLTK  A +LG  GI VN + P    T M      N  DG+  +      I         
Sbjct: 189 GLTKGLARDLGPRGITVNIVHPGSTDTDM------NPADGDHAEAQRER-IA-------- 233

Query: 251 EEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
                  G+  G     +DIA    +LA  + ++V+G +L +DGG  
Sbjct: 234 ------TGSY-GEP---QDIAGLVAWLAGPQGKFVTGASLTIDGGAN 270

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} Length = 267

 Score =  195 bits (499), Expect = 1e-61
 Identities = 75/281 (26%), Positives = 114/281 (40%), Gaps = 52/281 (18%)

Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVI-------------ADVEDTLGSVLASTL 75
              KVAI+TG +RGIG A     A  G  VVI               +E   G  L    
Sbjct: 25  ETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALT--- 81

Query: 76  APAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFD 135
                     DVS    +  L  +    +G +D+L NNAG++       +I +     FD
Sbjct: 82  -------AQADVSDPAAVRRLFATAEEAFGGVDVLVNNAGIM----PLTTIAETGDAVFD 130

Query: 136 NVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKN 195
            V+ VN+KG    ++ AA+ +  R GG II+ ++    +       Y A+K  +  +T  
Sbjct: 131 RVIAVNLKGTFNTLREAAQRL--RVGGRIINMSTSQVGLLHPSYGIYAAAKAGVEAMTHV 188

Query: 196 AACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVS 255
            + EL    I VN ++P   AT + +      G  +E  +      P             
Sbjct: 189 LSKELRGRDITVNAVAPGPTATDLFLE-----GKSDEVRDRFAKLAP------------- 230

Query: 256 GLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGV 296
            L  L GT    +DIA A  +LA  +  +V+G  L  +GG+
Sbjct: 231 -LERL-GTP---QDIAGAVAFLAGPDGAWVNGQVLRANGGI 266

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* Length = 241

 Score =  190 bits (484), Expect = 7e-60
 Identities = 40/276 (14%), Positives = 77/276 (27%), Gaps = 47/276 (17%)

Query: 27  RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCD 86
              E +  ++ GG   +G   V+ F      V   DV +          A   V      
Sbjct: 3   ASGEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVEN-----EEASASVIVKMTDSF 57

Query: 87  VSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMA 146
               + +   +   +    ++D +   AG         +         D + + ++    
Sbjct: 58  TEQADQVTAEV-GKLLGDQKVDAILCVAGG---WAGGNAKSKSLFKNCDLMWKQSIWTST 113

Query: 147 LGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELG--RYG 204
           +    A + +  + GG +    + A + G  G   Y  +K A+  L ++ A +      G
Sbjct: 114 ISSHLATKHL--KEGGLLTLAGAKAALDGTPGMIGYGMAKGAVHQLCQSLAGKNSGMPSG 171

Query: 205 IRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT 264
                + P  + T M      N     E D                  +           
Sbjct: 172 AAAIAVLPVTLDTPM------NRKSMPEAD---------------FSSWT---------- 200

Query: 265 LRSKDIAEAALYLASDESRYVSGHNLVV--DGGVTT 298
              + + E      +   R  SG  + V    G T 
Sbjct: 201 -PLEFLVETFHDWITGNKRPNSGSLIQVVTTDGKTE 235

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} Length = 264

 Score =  190 bits (486), Expect = 1e-59
 Identities = 78/285 (27%), Positives = 131/285 (45%), Gaps = 39/285 (13%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLA---------PA 78
           RL   +A++TG   GIG A     A  GA V   D++          L            
Sbjct: 4   RLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRG 63

Query: 79  PVTFVHCDVSLEEDIENLINSTVSRYGR-LDILYNNAGVLGNQRKHKSIIDFDADEFDNV 137
                  DVS       L+    + + R   ++ + AG+     + + ++    D++D V
Sbjct: 64  NHAAFQADVSEARAARCLLEQVQACFSRPPSVVVSCAGIT----QDEFLLHMSEDDWDKV 119

Query: 138 MRVNVKGMALGIKHAARVMI-NRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNA 196
           + VN+KG  L  + AA+ ++ N   G II+ +S+ G +G +G   Y ASK  ++GLT+ A
Sbjct: 120 IAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVGQTNYAASKAGVIGLTQTA 179

Query: 197 ACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSG 256
           A ELGR+GIR N + P  +AT M           ++  + +   IP              
Sbjct: 180 ARELGRHGIRCNSVLPGFIATPMT------QKVPQKVVDKITEMIP-------------- 219

Query: 257 LGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTSRN 301
           +G+L G     +D+A+   +LAS++S Y++G ++ V GG+  + N
Sbjct: 220 MGHL-GDP---EDVADVVAFLASEDSGYITGTSVEVTGGLFMAEN 260

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} Length = 250

 Score =  188 bits (481), Expect = 3e-59
 Identities = 57/279 (20%), Positives = 94/279 (33%), Gaps = 43/279 (15%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIAD-----VEDTLGSVLASTLAPAPVTF 82
             +  +AIITG ++GIG       A  G +VV+       +E     ++ S         
Sbjct: 4   EKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIV 63

Query: 83  VHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNV 142
           +  D++     +  I     +YG +DIL N A +          +    D F  +M +NV
Sbjct: 64  LPLDITDCTKADTEIKDIHQKYGAVDILVNAAAMF-----MDGSLSEPVDNFRKIMEINV 118

Query: 143 KGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGR 202
                 +K    +M  +  G I + AS A   G      Y ++K A++GL ++   EL  
Sbjct: 119 IAQYGILKTVTEIMKVQKNGYIFNVASRAAKYGFADGGIYGSTKFALLGLAESLYRELAP 178

Query: 203 YGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKG 262
            GIRV  + P  V T M   A                         K EE          
Sbjct: 179 LGIRVTTLCPGWVNTDMAKKA---------------------GTPFKDEEM--------- 208

Query: 263 TTLRSKDIAEAALYLASDESR-YVSGHNLVVDGGVTTSR 300
             ++  D+      L +      +      +   +    
Sbjct: 209 --IQPDDLLNTIRCLLNLSENVCIKDIVFEMKKSIIEGH 245

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} Length = 267

 Score =  189 bits (482), Expect = 4e-59
 Identities = 70/280 (25%), Positives = 119/280 (42%), Gaps = 31/280 (11%)

Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVI-----ADVEDTLGSVLASTLAPAPVTFV 83
           L+GK A++TG   GIG+A        GA V+I      +V +T+  + A     A +  V
Sbjct: 8   LKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQY-PDAILQPV 66

Query: 84  HCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVK 143
             D+  E+  +++I     +Y ++DIL NN G+     +     D   +++  +  VN+ 
Sbjct: 67  VADLGTEQGCQDVIE----KYPKVDILINNLGIF----EPVEYFDIPDEDWFKLFEVNIM 118

Query: 144 GMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRY 203
                 +   + MI R  G +I  AS A +M       Y+A+K   + L+++ A      
Sbjct: 119 SGVRLTRSYLKKMIERKEGRVIFIASEAAIMPSQEMAHYSATKTMQLSLSRSLAELTTGT 178

Query: 204 GIRVNCISPFGVATSM----LVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGN 259
            + VN I P    T      L + + N     EE         ++K   K     S +  
Sbjct: 179 NVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEE---------AEKRFMKENRPTSIIQR 229

Query: 260 LKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTS 299
           L       ++IA    +L+S  S  ++G  L +DGG+  S
Sbjct: 230 L-IRP---EEIAHLVTFLSSPLSSAINGSALRIDGGLVRS 265

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} Length = 247

 Score =  188 bits (479), Expect = 7e-59
 Identities = 79/271 (29%), Positives = 132/271 (48%), Gaps = 31/271 (11%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVI--ADVEDTLGSVLAS-TLAPAPVTFVH 84
           +L+GK AI+TG +RG+G+A        GA +V+  +    +L +       A   V    
Sbjct: 2   QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAK 61

Query: 85  CDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKG 144
            DV   ED+EN++ + +  +GR+DIL NNAG+     +   ++     ++D+V+  N+K 
Sbjct: 62  GDVKNPEDVENMVKTAMDAFGRIDILVNNAGI----TRDTLMLKMSEKDWDDVLNTNLKS 117

Query: 145 MALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYG 204
             L  K  +++M+ +  G II+  S+AG++G  G   Y ASK  ++G TK+ A E    G
Sbjct: 118 AYLCTKAVSKIMLKQKSGKIINITSIAGIIGNAGQANYAASKAGLIGFTKSIAKEFAAKG 177

Query: 205 IRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT 264
           I  N ++P  + T M           ++  E     IP              L    GT 
Sbjct: 178 IYCNAVAPGIIKTDMT------DVLPDKVKEMYLNNIP--------------LKRF-GTP 216

Query: 265 LRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
              +++A    +LASD+S Y++G  + +DGG
Sbjct: 217 ---EEVANVVGFLASDDSNYITGQVINIDGG 244

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} Length = 252

 Score =  187 bits (477), Expect = 1e-58
 Identities = 45/262 (17%), Positives = 83/262 (31%), Gaps = 33/262 (12%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADV-EDTLGSVLASTLAP-APVTFVHC 85
                   + G    IG    + FA  G  V       + L  ++A   A    +     
Sbjct: 4   TPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSL 63

Query: 86  DVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGM 145
           D   E+++   +N     +  L++   N G       +  I++     F  V  +     
Sbjct: 64  DARNEDEVTAFLN-AADAHAPLEVTIFNVGA----NVNFPILETTDRVFRKVWEMACWAG 118

Query: 146 ALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGI 205
            +  + +AR+M+  G G I  T + A + GG G  A+ ++K  +  + ++ A EL    I
Sbjct: 119 FVSGRESARLMLAHGQGKIFFTGATASLRGGSGFAAFASAKFGLRAVAQSMARELMPKNI 178

Query: 206 RV-NCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT 264
            V + I   GV T+ +          +          P+                     
Sbjct: 179 HVAHLIIDSGVDTAWVRERREQMFGKDALANPDLLMPPA--------------------- 217

Query: 265 LRSKDIAEAALYLASDESRYVS 286
                +A A   L        +
Sbjct: 218 ----AVAGAYWQLYQQPKSAWT 235

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 Length = 244

 Score =  186 bits (475), Expect = 2e-58
 Identities = 59/269 (21%), Positives = 90/269 (33%), Gaps = 46/269 (17%)

Query: 32  KVAIITGGARGIGEAAVRLFARHGAK-------VVIADV-EDTLGSVLAS-TLAPAPVTF 82
            + +ITG  +GIG A    FAR           +V++      L  +        A    
Sbjct: 3   HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDT 62

Query: 83  VHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNV 142
           +  D+S   D+  L    V RYG +D L NNAGV     +  ++ D   ++FD  M  N+
Sbjct: 63  ITADISDMADVRRLTTHIVERYGHIDCLVNNAGVG----RFGALSDLTEEDFDYTMNTNL 118

Query: 143 KGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGR 202
           KG     +    +M  +  G I    SVA          Y  SK    GL +       +
Sbjct: 119 KGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRLYARK 178

Query: 203 YGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKG 262
             +R+  + P  V T M           +E    M                         
Sbjct: 179 CNVRITDVQPGAVYTPMW------GKVDDEMQALM------------------------- 207

Query: 263 TTLRSKDIAEAALYLASDESRYVSGHNLV 291
             +  +DIA   +      SR V    ++
Sbjct: 208 --MMPEDIAAPVVQAYLQPSRTVVEEIIL 234

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* Length = 257

 Score =  186 bits (474), Expect = 4e-58
 Identities = 54/295 (18%), Positives = 91/295 (30%), Gaps = 76/295 (25%)

Query: 32  KVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEE 91
            + +I+G A GIG A  ++    G ++V  D+ D                 V  D+S  E
Sbjct: 2   SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDA---------------EVIADLSTAE 46

Query: 92  DIENLINSTVSR-YGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIK 150
             +  I   +++    +D L   AG+                   NV+ VN  G    + 
Sbjct: 47  GRKQAIADVLAKCSKGMDGLVLCAGLGP-----------QTKVLGNVVSVNYFGATELMD 95

Query: 151 HAARVMINRGGGCIISTA----------------------------SVAGVMGGLGPHAY 182
                +        +  +                             V       G  AY
Sbjct: 96  AFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAY 155

Query: 183 TASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIP 242
             SK+A+    +  A   G  G+R+N I+P    T +L    +   D    +    F  P
Sbjct: 156 AGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQ---DPRYGESIAKFVPP 212

Query: 243 SQKEVRKMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
                      +              ++A    +L S  + YV G  +V+DGG+ 
Sbjct: 213 -----------MGRRA-------EPSEMASVIAFLMSPAASYVHGAQIVIDGGID 249

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} Length = 346

 Score =  188 bits (480), Expect = 6e-58
 Identities = 60/290 (20%), Positives = 103/290 (35%), Gaps = 53/290 (18%)

Query: 24  PSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPA----- 78
           P+  RL G    ITG +RGIG+A     A+ GA +VIA         L  T+  A     
Sbjct: 38  PNTGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIE 97

Query: 79  ----PVTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEF 134
                      DV  E+ I   +   + ++G +DIL NNA  +       + +D      
Sbjct: 98  AVGGKALPCIVDVRDEQQISAAVEKAIKKFGGIDILVNNASAI----SLTNTLDTPTKRL 153

Query: 135 DNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGL--GPHAYTASKHAIVGL 192
           D +M VN +G  L  K     +       I++ +    +         AYT +K+ +   
Sbjct: 154 DLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVWFKQHCAYTIAKYGMSMY 213

Query: 193 TKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEE 252
               A E  +  I VN + P     +  ++     G               + + RK++ 
Sbjct: 214 VLGMAEEF-KGEIAVNALWPKTAIHTAAMDMLGGPG--------------IESQCRKVD- 257

Query: 253 FVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDG-----GVT 297
                            IA+AA  +     +  +G+ ++ +      G+ 
Sbjct: 258 ----------------IIADAAYSIFQK-PKSFTGNFVIDENILKEEGIE 290

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235

 Score =  185 bits (471), Expect = 7e-58
 Identities = 48/269 (17%), Positives = 90/269 (33%), Gaps = 42/269 (15%)

Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADV-EDTLGSVLASTLAPAPVTFVHCDV 87
           +     I+TG   G+G A        G +V +       L            V  +  D+
Sbjct: 1   MSLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELL--LGNAVIGIVADL 58

Query: 88  SLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMAL 147
           +  ED++    + V   G  +++ + AG      +   +  + A++   VM  N+    L
Sbjct: 59  AHHEDVDVAFAAAVEWGGLPELVLHCAGTG----EFGPVGVYTAEQIRRVMESNLVSTIL 114

Query: 148 GIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRV 207
             +   R++  RGG  + +  S A  +G      Y ASK  + G  ++   EL    +R+
Sbjct: 115 VAQQTVRLIGERGG-VLANVLSSAAQVGKANESLYCASKWGMRGFLESLRAELKDSPLRL 173

Query: 208 NCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRS 267
             + P G+ +    N       G                                  +  
Sbjct: 174 VNLYPSGIRSEFWDNTDHVDPSG---------------------------------FMTP 200

Query: 268 KDIAEAALY-LASDESRYVSGHNLVVDGG 295
           +D A   L  L +  S +V+   +  + G
Sbjct: 201 EDAAAYMLDALEARSSCHVTDLFIGRNEG 229

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 Length = 285

 Score =  186 bits (475), Expect = 7e-58
 Identities = 74/271 (27%), Positives = 131/271 (48%), Gaps = 30/271 (11%)

Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVT--FVHCD 86
            E KVA++TG  RGIG    ++ A+  + V+           +   +            D
Sbjct: 42  GENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGD 101

Query: 87  VSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMA 146
           VS +E+I  +IN  ++ +  +DIL NNAG+     +    +    DE+++V+R N+  + 
Sbjct: 102 VSKKEEISEVINKILTEHKNVDILVNNAGI----TRDNLFLRMKNDEWEDVLRTNLNSLF 157

Query: 147 LGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIR 206
              +  ++ MIN   G II+ +S+ G+ G +G   Y++SK  ++G TK+ A EL    I 
Sbjct: 158 YITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGVIGFTKSLAKELASRNIT 217

Query: 207 VNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLR 266
           VN I+P  +++ M           E+  + +   IP               G + GT   
Sbjct: 218 VNAIAPGFISSDMT------DKISEQIKKNIISNIP--------------AGRM-GTP-- 254

Query: 267 SKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
            +++A  A +L+SD+S Y++G   V+DGG++
Sbjct: 255 -EEVANLACFLSSDKSGYINGRVFVIDGGLS 284

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} Length = 319

 Score =  187 bits (476), Expect = 1e-57
 Identities = 61/219 (27%), Positives = 104/219 (47%), Gaps = 14/219 (6%)

Query: 27  RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADV-EDTLGSV---LASTLAPAPVTF 82
           +   G+ A +TGGA G+G   VR     G KV IAD+ +D++      L +  +   V  
Sbjct: 4   KDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMG 63

Query: 83  VHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNV 142
           V  DV+  E  +   +   +R+G + IL NNAGV   Q     I +   D++D ++ VN+
Sbjct: 64  VQLDVASREGFKMAADEVEARFGPVSILCNNAGVNLFQP----IEESSYDDWDWLLGVNL 119

Query: 143 KGMALGIKHAARVMINR------GGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNA 196
            G+  G+      M+ R       GG +++TAS+A  +    P  Y  +K A+ GL+++ 
Sbjct: 120 HGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGSPGIYNTTKFAVRGLSESL 179

Query: 197 ACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDE 235
              L +Y I V+ + P  V + +  +        + E +
Sbjct: 180 HYSLLKYEIGVSVLCPGLVKSYIYASDDIRPDALKGEVK 218

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 236

 Score =  183 bits (467), Expect = 2e-57
 Identities = 47/272 (17%), Positives = 88/272 (32%), Gaps = 50/272 (18%)

Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVS 88
           +     I+ GG   +G A +  F ++G  V+  D        L++         V  + +
Sbjct: 1   MSSGKVIVYGGKGALGSAILEFFKKNGYTVLNID--------LSANDQADSNILVDGNKN 52

Query: 89  LEEDIENLINSTVS--RYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMA 146
             E  ++++  T S  +  ++D ++  AG         +         D +++ +V   A
Sbjct: 53  WTEQEQSILEQTASSLQGSQVDGVFCVAGG---WAGGSASSKDFVKNADLMIKQSVWSSA 109

Query: 147 LGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELG--RYG 204
           +  K A   +  + GG +  T + A +        Y  +K A+  LT + A +       
Sbjct: 110 IAAKLATTHL--KPGGLLQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSLAAKDSGLPDN 167

Query: 205 IRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT 264
             V  I P  + T M      N       D                            + 
Sbjct: 168 SAVLTIMPVTLDTPM------NRKWMPNADH--------------------------SSW 195

Query: 265 LRSKDIAEAALYLASD-ESRYVSGHNLVVDGG 295
                I+E  L   ++  SR  SG  L +   
Sbjct: 196 TPLSFISEHLLKWTTETSSRPSSGALLKITTE 227

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} Length = 246

 Score =  183 bits (468), Expect = 3e-57
 Identities = 94/270 (34%), Positives = 133/270 (49%), Gaps = 31/270 (11%)

Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADV--EDTLGSVLAS-TLAPAPVTFVHC 85
           L+GKVA++TG +RGIG A     A+ GA VV+     E     V+       +    V  
Sbjct: 2   LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRA 61

Query: 86  DVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGM 145
           DV+  ED+ N++  TV  +G++DIL NNAGV     K   ++    +E+D V+  N+KG+
Sbjct: 62  DVANAEDVTNMVKQTVDVFGQVDILVNNAGV----TKDNLLMRMKEEEWDTVINTNLKGV 117

Query: 146 ALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGI 205
            L  K  +R M+ +  G I++ ASV GV G  G   Y A+K  ++GLTK +A EL    I
Sbjct: 118 FLCTKAVSRFMMRQRHGRIVNIASVVGVTGNPGQANYVAAKAGVIGLTKTSAKELASRNI 177

Query: 206 RVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL 265
            VN I+P  +AT M           E     M   IP                   G   
Sbjct: 178 TVNAIAPGFIATDMT------DVLDENIKAEMLKLIP--------------AAQF-GEA- 215

Query: 266 RSKDIAEAALYLASDESRYVSGHNLVVDGG 295
             +DIA A  + ASD+S+Y++G  L VDGG
Sbjct: 216 --QDIANAVTFFASDQSKYITGQTLNVDGG 243

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* Length = 248

 Score =  183 bits (468), Expect = 3e-57
 Identities = 71/270 (26%), Positives = 122/270 (45%), Gaps = 31/270 (11%)

Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAP---VTFVHC 85
           L+GKV+++TG  RGIG A     A  G+ V+I          +A  +A         V  
Sbjct: 5   LQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEM 64

Query: 86  DVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGM 145
           ++  EE I        +    +DIL NNAG+     + K  +     +++ V++VN+ G 
Sbjct: 65  NLLSEESINKAFEEIYNLVDGIDILVNNAGI----TRDKLFLRMSLLDWEEVLKVNLTGT 120

Query: 146 ALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGI 205
            L  +++ R MI +  G I++ +SV G  G +G   Y+ +K  ++G TK+ A EL    +
Sbjct: 121 FLVTQNSLRKMIKQRWGRIVNISSVVGFTGNVGQVNYSTTKAGLIGFTKSLAKELAPRNV 180

Query: 206 RVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL 265
            VN ++P  + T M       +   EE  +     IP  +            G       
Sbjct: 181 LVNAVAPGFIETDM------TAVLSEEIKQKYKEQIPLGR-----------FG------- 216

Query: 266 RSKDIAEAALYLASDESRYVSGHNLVVDGG 295
             +++A   L+L S+ + Y++G  + V+GG
Sbjct: 217 SPEEVANVVLFLCSELASYITGEVIHVNGG 246

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} PDB: 3sj7_A* Length = 246

 Score =  182 bits (465), Expect = 7e-57
 Identities = 77/270 (28%), Positives = 129/270 (47%), Gaps = 31/270 (11%)

Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADV--EDTLGSVLAS-TLAPAPVTFVHC 85
              K A++TG +RGIG +     A  G  V +     ++   +V+            +  
Sbjct: 2   KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQA 61

Query: 86  DVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGM 145
           +V+  ++++ +I   VS++G LD+L NNAG+     +   ++     E+D+V+  N+KG+
Sbjct: 62  NVADADEVKAMIKEVVSQFGSLDVLVNNAGIT----RDNLLMRMKEQEWDDVIDTNLKGV 117

Query: 146 ALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGI 205
              I+ A   M+ +  G II+ +SV G +G  G   Y A+K  ++GLTK+AA EL   GI
Sbjct: 118 FNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGI 177

Query: 206 RVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL 265
            VN ++P  + + M           +E  E M   IP              L    G   
Sbjct: 178 TVNAVAPGFIVSDMT------DALSDELKEQMLTQIP--------------LARF-GQD- 215

Query: 266 RSKDIAEAALYLASDESRYVSGHNLVVDGG 295
              DIA    +LASD+++Y++G  + V+GG
Sbjct: 216 --TDIANTVAFLASDKAKYITGQTIHVNGG 243

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} Length = 270

 Score =  183 bits (466), Expect = 1e-56
 Identities = 81/269 (30%), Positives = 129/269 (47%), Gaps = 30/269 (11%)

Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPA--PVTFVHCD 86
           L+ +VAI+TG +RGIG A     AR GA V+     +     + +    A         +
Sbjct: 26  LDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLN 85

Query: 87  VSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMA 146
           V+    ++ L+ ST+  +G L++L NNAG+     + +  +    DE+D V+  N+K + 
Sbjct: 86  VNDATAVDALVESTLKEFGALNVLVNNAGI----TQDQLAMRMKDDEWDAVIDTNLKAVF 141

Query: 147 LGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIR 206
              +   R M+   GG I++  SV G  G  G   Y A+K  + G+T+  A E+G  GI 
Sbjct: 142 RLSRAVLRPMMKARGGRIVNITSVVGSAGNPGQVNYAAAKAGVAGMTRALAREIGSRGIT 201

Query: 207 VNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLR 266
           VNC++P  + T M        G  +E+   +   IP              LG L G+   
Sbjct: 202 VNCVAPGFIDTDMT------KGLPQEQQTALKTQIP--------------LGRL-GSP-- 238

Query: 267 SKDIAEAALYLASDESRYVSGHNLVVDGG 295
            +DIA A  +LAS ++ Y++G  L V+GG
Sbjct: 239 -EDIAHAVAFLASPQAGYITGTTLHVNGG 266

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} Length = 257

 Score =  182 bits (463), Expect = 2e-56
 Identities = 71/277 (25%), Positives = 116/277 (41%), Gaps = 38/277 (13%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDV 87
            +   VA++TGGA G+G A  +     GA+VV+ D+    G  + + L      F   DV
Sbjct: 6   EIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIR---GEDVVADLGDR-ARFAAADV 61

Query: 88  SLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMAL 147
           + E  + + ++      G L I+ N AG     R       F    F  ++ +N+ G   
Sbjct: 62  TDEAAVASALD-LAETMGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFN 120

Query: 148 GIKHAARVMI--------NRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACE 199
            ++ AA  +             G II+TASVA   G +G  AY+ASK  +VG+T   A +
Sbjct: 121 VLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIARD 180

Query: 200 LGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGN 259
           L  + IRV  I+P    T +L      +   EE    +   +P            S LG 
Sbjct: 181 LASHRIRVMTIAPGLFDTPLL------ASLPEEARASLGKQVP----------HPSRLG- 223

Query: 260 LKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGV 296
                    +    A+++   E+  ++G  + +DG +
Sbjct: 224 ------NPDEYGALAVHII--ENPMLNGEVIRLDGAI 252

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} Length = 260

 Score =  181 bits (463), Expect = 2e-56
 Identities = 62/276 (22%), Positives = 123/276 (44%), Gaps = 32/276 (11%)

Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADV-EDTLGSV---LASTLAPAPVTFVH 84
           ++GK+A++T G+ G+G A+    AR+GA++++     + L +    +AS ++ A V  V 
Sbjct: 5   IQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVA 64

Query: 85  CDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKG 144
            D+    DI+ L        G  DIL  + G      +    ++   +++D   R+  + 
Sbjct: 65  GDIREPGDIDRLFE-KARDLGGADILVYSTGGP----RPGRFMELGVEDWDESYRLLARS 119

Query: 145 MALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYG 204
                + AA  M+ +G G ++   SV  +            +  ++G+ +  A EL  +G
Sbjct: 120 AVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQDLALSNIMRLPVIGVVRTLALELAPHG 179

Query: 205 IRVNCISPFGVATSML-----VNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGN 259
           + VN + P  + T  +       A R+    EE  + M   IP  +           +G 
Sbjct: 180 VTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMASRIPMGR-----------VG- 227

Query: 260 LKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
                 + +++A    +LAS+++ +++G  + VDGG
Sbjct: 228 ------KPEELASVVAFLASEKASFITGAVIPVDGG 257

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} Length = 322

 Score =  183 bits (467), Expect = 3e-56
 Identities = 82/291 (28%), Positives = 132/291 (45%), Gaps = 50/291 (17%)

Query: 23  PPSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTF 82
           P S   ++G+V I+TG   GIG A    FA  GA+VV+ D+   L    AS  + A    
Sbjct: 19  PGSMGVVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVV 78

Query: 83  ------------VHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFD 130
                          +V+  +    LI + V  +G LD+L NNAG++    + + I +  
Sbjct: 79  DEITAAGGEAVADGSNVADWDQAAGLIQTAVETFGGLDVLVNNAGIV----RDRMIANTS 134

Query: 131 ADEFDNVMRVNVKGMALGIKHAARVM------INRGGGCIISTASVAGVMGGLGPHAYTA 184
            +EFD V+ V++KG    ++HAA              G II+T+S AG+ G +G   Y+A
Sbjct: 135 EEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQGSVGQGNYSA 194

Query: 185 SKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQ 244
           +K  I  LT   A E+GRYG+ VN I+P    T M                     + ++
Sbjct: 195 AKAGIATLTLVGAAEMGRYGVTVNAIAP-SARTRMTE------------------TVFAE 235

Query: 245 KEVRKMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
               + ++F           +  ++++   ++L S E+R V+G    V+GG
Sbjct: 236 MMATQDQDF---------DAMAPENVSPLVVWLGSAEARDVTGKVFEVEGG 277

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB: 3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E Length = 248

 Score =  181 bits (461), Expect = 3e-56
 Identities = 79/267 (29%), Positives = 127/267 (47%), Gaps = 29/267 (10%)

Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVS 88
           LEGKVA++TG +RGIG+A   L A  GAKV+     ++    ++  L          +V+
Sbjct: 7   LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMA-LNVT 65

Query: 89  LEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALG 148
             E IE ++ +    +G +DIL NNAG+     +   ++    +E+ ++M  N+  +   
Sbjct: 66  NPESIEAVLKAITDEFGGVDILVNNAGIT----RDNLLMRMKEEEWSDIMETNLTSIFRL 121

Query: 149 IKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVN 208
            K   R M+ +  G II+  SV G MG  G   Y A+K  ++G TK+ A E+   G+ VN
Sbjct: 122 SKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVN 181

Query: 209 CISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSK 268
            ++P  + T M           +E+       +P               G L G     +
Sbjct: 182 TVAPGFIETDM------TKALNDEQRTATLAQVP--------------AGRL-GDP---R 217

Query: 269 DIAEAALYLASDESRYVSGHNLVVDGG 295
           +IA A  +LAS E+ Y++G  L V+GG
Sbjct: 218 EIASAVAFLASPEAAYITGETLHVNGG 244

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} Length = 247

 Score =  181 bits (461), Expect = 4e-56
 Identities = 76/269 (28%), Positives = 120/269 (44%), Gaps = 30/269 (11%)

Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPA--PVTFVHCD 86
           L  KVA++TG +RGIG       A  GA VV             +++         +  +
Sbjct: 3   LNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLN 62

Query: 87  VSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMA 146
           +S  E I+N      +    +DIL NNAG+     +   ++    DE+ +V+  N+  + 
Sbjct: 63  ISDIESIQNFFAEIKAENLAIDILVNNAGI----TRDNLMMRMSEDEWQSVINTNLSSIF 118

Query: 147 LGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIR 206
              K   R M+ +  G IIS  SV G  G  G   Y A+K  ++G +K+ A E+    I 
Sbjct: 119 RMSKECVRGMMKKRWGRIISIGSVVGSAGNPGQTNYCAAKAGVIGFSKSLAYEVASRNIT 178

Query: 207 VNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLR 266
           VN ++P  +AT M           +E+   +   IPS +           +G        
Sbjct: 179 VNVVAPGFIATDM------TDKLTDEQKSFIATKIPSGQ-----------IG-------E 214

Query: 267 SKDIAEAALYLASDESRYVSGHNLVVDGG 295
            KDIA A  +LAS+E++Y++G  L V+GG
Sbjct: 215 PKDIAAAVAFLASEEAKYITGQTLHVNGG 243

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A Length = 266

 Score =  181 bits (461), Expect = 4e-56
 Identities = 77/275 (28%), Positives = 127/275 (46%), Gaps = 29/275 (10%)

Query: 21  DAPPSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPV 80
             P S  +L G+ A++TG   GIGEA  R F   GA V +    +     +A+ L     
Sbjct: 17  QGPGSMFKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVF 76

Query: 81  TFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRV 140
            F   ++S  + I+ L          +DIL NNAG+     +    +     ++D+V+ V
Sbjct: 77  VFS-ANLSDRKSIKQLAEVAEREMEGIDILVNNAGI----TRDGLFVRMQDQDWDDVLAV 131

Query: 141 NVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACEL 200
           N+   +   +     M+ R  G II+  S+ GV+G  G   Y A+K  ++G +K  A E+
Sbjct: 132 NLTAASTLTRELIHSMMRRRYGRIINITSIVGVVGNPGQTNYCAAKAGLIGFSKALAQEI 191

Query: 201 GRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNL 260
               I VNCI+P  + ++M           E++ E +   IP ++           +G  
Sbjct: 192 ASRNITVNCIAPGFIKSAM------TDKLNEKQKEAIMAMIPMKR-----------MG-- 232

Query: 261 KGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
                  ++IA A +YLASDE+ Y++G  L ++GG
Sbjct: 233 -----IGEEIAFATVYLASDEAAYLTGQTLHINGG 262

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} Length = 256

 Score =  180 bits (458), Expect = 9e-56
 Identities = 61/271 (22%), Positives = 107/271 (39%), Gaps = 31/271 (11%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVI-ADVEDTLGSVLASTLAPAPVTF--VH 84
            +  ++A +TGG  GIG +  +   + G +VV                       F    
Sbjct: 10  VMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASE 69

Query: 85  CDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKG 144
            +V   +  +   +   +  G +D+L NNAG+     +         +++  V+  N+  
Sbjct: 70  GNVGDWDSTKQAFDKVKAEVGEIDVLVNNAGI----TRDVVFRKMTREDWQAVIDTNLTS 125

Query: 145 MALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYG 204
           +    K     M+ RG G II+ +SV G  G  G   Y+ +K  I G T + A E+   G
Sbjct: 126 LFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAGIHGFTMSLAQEVATKG 185

Query: 205 IRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT 264
           + VN +SP  + T M+           +  E +   IP              +  L G+ 
Sbjct: 186 VTVNTVSPGYIGTDMV------KAIRPDVLEKIVATIP--------------VRRL-GSP 224

Query: 265 LRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
               +I     +LAS+ES + +G +  ++GG
Sbjct: 225 ---DEIGSIVAWLASEESGFSTGADFSLNGG 252

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} Length = 255

 Score =  180 bits (458), Expect = 1e-55
 Identities = 79/290 (27%), Positives = 122/290 (42%), Gaps = 57/290 (19%)

Query: 25  SHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVI-------------ADVEDTLGSVL 71
           ++  L+GKVA++TG +RGIG A  +  A  GA V I              +++   GS  
Sbjct: 1   ANSMLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAF 60

Query: 72  ASTLAPAPVTFVHCDVSLEEDIENLINSTVSR------YGRLDILYNNAGVLGNQRKHKS 125
           +          +  ++     +E L +S  +         + DIL NNAG+         
Sbjct: 61  S----------IGANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIG----PGAF 106

Query: 126 IIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTAS 185
           I +     FD ++ VN K     I+ A   +  R    II+ +S A  +      AY+ +
Sbjct: 107 IEETTEQFFDRMVSVNAKAPFFIIQQALSRL--RDNSRIINISSAATRISLPDFIAYSMT 164

Query: 186 KHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQK 245
           K AI  +T   A +LG  GI VN I P  V T                   MN  + S  
Sbjct: 165 KGAINTMTFTLAKQLGARGITVNAILPGFVKTD------------------MNAELLSDP 206

Query: 246 EVRKMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
            +++    +S    L G     +DIA+ A +LAS +SR+V+G  + V GG
Sbjct: 207 MMKQYATTISAFNRL-GEV---EDIADTAAFLASPDSRWVTGQLIDVSGG 252

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} Length = 269

 Score =  179 bits (457), Expect = 3e-55
 Identities = 71/270 (26%), Positives = 117/270 (43%), Gaps = 30/270 (11%)

Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADV-EDTLGSVLASTLAPAPVTF--VHC 85
              +VA +TGG  G+G A  R     G  V ++    +   S        A   F     
Sbjct: 23  QAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAV 82

Query: 86  DVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGM 145
           DV+  E  E      ++ +G++D+L NNAG+     +  + +     ++D VMR ++  M
Sbjct: 83  DVADFESCERCAEKVLADFGKVDVLINNAGI----TRDATFMKMTKGDWDAVMRTDLDAM 138

Query: 146 ALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGI 205
               K     M+ R  G I++  SV G  G  G   Y ++K  I G TK  A E  + GI
Sbjct: 139 FNVTKQFIAGMVERRFGRIVNIGSVNGSRGAFGQANYASAKAGIHGFTKTLALETAKRGI 198

Query: 206 RVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL 265
            VN +SP  +AT+M+      +   +  +  +   IP              +G L G   
Sbjct: 199 TVNTVSPGYLATAMV-----EAVPQDVLEAKILPQIP--------------VGRL-GRP- 237

Query: 266 RSKDIAEAALYLASDESRYVSGHNLVVDGG 295
              ++A    +L SD++ +V+G +L ++GG
Sbjct: 238 --DEVAALIAFLCSDDAGFVTGADLAINGG 265

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} Length = 260

 Score =  178 bits (454), Expect = 5e-55
 Identities = 62/272 (22%), Positives = 105/272 (38%), Gaps = 27/272 (9%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADV-EDTLGSVLAS-TLAPAPVTFVHC 85
            + G+V ++TG +RGIG        + GA V I     DTL  V             V C
Sbjct: 2   PMNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVC 61

Query: 86  DVSLEEDIENLINSTVS-RYGRLDILYNNAGVLGNQR---KHKSIIDFDADEFDNVMRVN 141
           D S E ++ +L       + GRLD+L NNA          ++K+  +  A  +D++  V 
Sbjct: 62  DSSQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVG 121

Query: 142 VKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELG 201
           ++G      + AR+M+  G G I+  +S    +  +    Y   K A   L  + A EL 
Sbjct: 122 LRGHYFCSVYGARLMVPAGQGLIVVISSPGS-LQYMFNVPYGVGKAACDKLAADCAHELR 180

Query: 202 RYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLK 261
           R+G+    + P  V T +L              E +      ++         +      
Sbjct: 181 RHGVSCVSLWPGIVQTELLKEHM--------AKEEVLQDPVLKQFKSAFSSAET------ 226

Query: 262 GTTLRSKDIAEAALYLASDESR-YVSGHNLVV 292
                ++   +  + LA+D +   +SG  L  
Sbjct: 227 -----TELSGKCVVALATDPNILSLSGKVLPS 253

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A Length = 247

 Score =  178 bits (453), Expect = 5e-55
 Identities = 63/274 (22%), Positives = 113/274 (41%), Gaps = 37/274 (13%)

Query: 22  APPSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVT 81
              +      +  ++TGG RGIG A  +  A  G KV +             + AP  + 
Sbjct: 6   TEGAKPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTH---------RGSGAPKGLF 56

Query: 82  FVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVN 141
            V  DV+  + ++    +     G +++L +NAG+         ++    ++F+ V+  N
Sbjct: 57  GVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGL----SADAFLMRMTEEKFEKVINAN 112

Query: 142 VKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELG 201
           + G     + A+R M     G +I   SV+G+ G      Y ASK  ++G+ ++ A EL 
Sbjct: 113 LTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAGVIGMARSIARELS 172

Query: 202 RYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLK 261
           +  +  N ++P  + T M           E   +     IP                 + 
Sbjct: 173 KANVTANVVAPGYIDTDM------TRALDERIQQGALQFIP--------------AKRV- 211

Query: 262 GTTLRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
           GT     ++A    +LAS+++ Y+SG  + VDGG
Sbjct: 212 GTP---AEVAGVVSFLASEDASYISGAVIPVDGG 242

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 242

 Score =  176 bits (448), Expect = 2e-54
 Identities = 72/271 (26%), Positives = 115/271 (42%), Gaps = 42/271 (15%)

Query: 32  KVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEE 91
           + A++TGGA G+G AA       G +VV+ D+      ++          +V  DV+ EE
Sbjct: 3   RSALVTGGASGLGRAAALALKARGYRVVVLDLRREGEDLI----------YVEGDVTREE 52

Query: 92  DIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKH 151
           D+   +         L  + + AGV   ++          + F  V+ VN+ G    ++ 
Sbjct: 53  DVRRAVARAQE-EAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRL 111

Query: 152 AARVMI------NRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGI 205
           AA  M           G I++TASVA   G +G  AY ASK  +V LT  AA EL  +GI
Sbjct: 112 AAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASKGGVVALTLPAARELAGWGI 171

Query: 206 RVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL 265
           RV  ++P    T +L       G  E+    +   +P          F   LG       
Sbjct: 172 RVVTVAPGLFDTPLL------QGLPEKAKASLAAQVP----------FPPRLG------- 208

Query: 266 RSKDIAEAALYLASDESRYVSGHNLVVDGGV 296
           R ++ A   L++   E+  ++G  + +DG +
Sbjct: 209 RPEEYAALVLHIL--ENPMLNGEVVRLDGAL 237

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* Length = 269

 Score =  176 bits (450), Expect = 2e-54
 Identities = 86/271 (31%), Positives = 134/271 (49%), Gaps = 35/271 (12%)

Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADV--EDTLGSVLAS-TLAPAPVTFVHC 85
           L  ++A++TG +RGIG A     A  GAKV +           V+A+   A      V  
Sbjct: 26  LTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKA 85

Query: 86  DVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGM 145
           DVS E ++E L  + + R+GRLD+L NNAG+     +   ++    D++ +V+ +N+ G+
Sbjct: 86  DVSQESEVEALFAAVIERWGRLDVLVNNAGI----TRDTLLLRMKRDDWQSVLDLNLGGV 141

Query: 146 ALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGI 205
            L  + AA++M+ +  G II+ ASV G MG  G   Y+A+K  ++GLTK  A EL   GI
Sbjct: 142 FLCSRAAAKIMLKQRSGRIINIASVVGEMGNPGQANYSAAKAGVIGLTKTVAKELASRGI 201

Query: 206 RVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL 265
            VN ++P  +AT M           E   E +   IP              LG   G   
Sbjct: 202 TVNAVAPGFIATDMT---------SELAAEKLLEVIP--------------LGRY-GEA- 236

Query: 266 RSKDIAEAALYLASD-ESRYVSGHNLVVDGG 295
              ++A    +LA+D  + Y++G  + +DGG
Sbjct: 237 --AEVAGVVRFLAADPAAAYITGQVINIDGG 265

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} Length = 245

 Score =  176 bits (448), Expect = 3e-54
 Identities = 68/268 (25%), Positives = 114/268 (42%), Gaps = 32/268 (11%)

Query: 32  KVAIITGGARGIGEAAVRLFARHGAKVVI--ADVEDTLGSVLA--STLAPAPVTFVHCDV 87
           + A+ITG +RGIG A     A  G  + I      +    V           V  +  ++
Sbjct: 2   RKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANL 61

Query: 88  SLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMAL 147
              E    L++      G LD L NNAG+     +   ++    ++++ V+  N+  +  
Sbjct: 62  LEAEAATALVHQAAEVLGGLDTLVNNAGIT----RDTLLVRMKDEDWEAVLEANLSAVFR 117

Query: 148 GIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRV 207
             + A ++M+    G I++  SV G++G  G   Y ASK  ++G T+  A E  + GI V
Sbjct: 118 TTREAVKLMMKARFGRIVNITSVVGILGNPGQANYVASKAGLIGFTRAVAKEYAQRGITV 177

Query: 208 NCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRS 267
           N ++P  + T M           +E  E     IP               G   G     
Sbjct: 178 NAVAPGFIETEMT------ERLPQEVKEAYLKQIP--------------AGRF-GRP--- 213

Query: 268 KDIAEAALYLASDESRYVSGHNLVVDGG 295
           +++AEA  +L S+++ Y++G  L VDGG
Sbjct: 214 EEVAEAVAFLVSEKAGYITGQTLCVDGG 241

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* Length = 291

 Score =  177 bits (450), Expect = 4e-54
 Identities = 61/314 (19%), Positives = 104/314 (33%), Gaps = 70/314 (22%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVI---------ADVEDTL----------- 67
                VA++TG A+ +G +        G  V +           +  TL           
Sbjct: 6   APTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITV 65

Query: 68  -GSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSI 126
              +     AP         V+L      L+ +  + +GR D+L NNA           +
Sbjct: 66  QADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSF----YPTPL 121

Query: 127 IDFDADEFDN--------------VMRVNVKGMALGIKHAARVMINRG------GGCIIS 166
           +  D D  +               +   N       IK  A  +             II+
Sbjct: 122 LRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIIN 181

Query: 167 TASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRN 226
                     LG   YT +K A+ GLT++AA EL    IRVN + P G  + +       
Sbjct: 182 MVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGP-G-LSVL------V 233

Query: 227 SGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVS 286
                   E     +P                 L      + ++++  ++L S +++Y++
Sbjct: 234 DDMPPAVWEGHRSKVP-----------------LYQRDSSAAEVSDVVIFLCSSKAKYIT 276

Query: 287 GHNLVVDGGVTTSR 300
           G  + VDGG + +R
Sbjct: 277 GTCVKVDGGYSLTR 290

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 Length = 272

 Score =  176 bits (448), Expect = 6e-54
 Identities = 57/206 (27%), Positives = 83/206 (40%), Gaps = 9/206 (4%)

Query: 23  PPSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADV-EDTLGSVLAS-TLAPAPV 80
           P   + + G++ +ITG   GIG      FA+  +K+V+ D+ +  L    A      A V
Sbjct: 23  PKRRKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKV 82

Query: 81  TFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRV 140
                D S  EDI +      +  G + IL NNAGV+        +      + +    V
Sbjct: 83  HTFVVDCSNREDIYSSAKKVKAEIGDVSILVNNAGVV----YTSDLFATQDPQIEKTFEV 138

Query: 141 NVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACEL 200
           NV       K     M     G I++ AS AG +      AY +SK A VG  K    EL
Sbjct: 139 NVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDEL 198

Query: 201 GRY---GIRVNCISPFGVATSMLVNA 223
                 G++  C+ P  V T  + N 
Sbjct: 199 AALQITGVKTTCLCPNFVNTGFIKNP 224

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} Length = 249

 Score =  175 bits (446), Expect = 6e-54
 Identities = 78/267 (29%), Positives = 128/267 (47%), Gaps = 33/267 (12%)

Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVS 88
           L GK ++ITG + GIG A  RL  + G+KV+I+   +     L + L       V C+++
Sbjct: 12  LTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEV-CNLA 70

Query: 89  LEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALG 148
            +E+  NLI+    +   LDIL  NAG+          I     +FD V+ +N+K   + 
Sbjct: 71  NKEECSNLIS----KTSNLDILVCNAGI----TSDTLAIRMKDQDFDKVIDINLKANFIL 122

Query: 149 IKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVN 208
            + A + MI +  G II+ +S+ G+ G  G   Y ASK  ++G+TK+ + E+   GI VN
Sbjct: 123 NREAIKKMIQKRYGRIINISSIVGIAGNPGQANYCASKAGLIGMTKSLSYEVATRGITVN 182

Query: 209 CISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSK 268
            ++P  + + M           E++ E +   IP               G         +
Sbjct: 183 AVAPGFIKSDM------TDKLNEKQREAIVQKIPLGT-----------YG-------IPE 218

Query: 269 DIAEAALYLASDESRYVSGHNLVVDGG 295
           D+A A  +LAS+ + Y++G  L V+GG
Sbjct: 219 DVAYAVAFLASNNASYITGQTLHVNGG 245

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} Length = 253

 Score =  175 bits (446), Expect = 7e-54
 Identities = 75/267 (28%), Positives = 117/267 (43%), Gaps = 37/267 (13%)

Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVS 88
              +  ++TGG RGIG A  R FA  G KV I            S   P     V CD++
Sbjct: 19  HMSRSVLVTGGNRGIGLAIARAFADAGDKVAITY---------RSGEPPEGFLAVKCDIT 69

Query: 89  LEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALG 148
             E +E         +G +++L  NAGV     K + ++    ++F +V+  N+ G    
Sbjct: 70  DTEQVEQAYKEIEETHGPVEVLIANAGV----TKDQLLMRMSEEDFTSVVETNLTGTFRV 125

Query: 149 IKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVN 208
           +K A R M+    G ++  +SV G++G  G   Y ASK  +VG  ++ A ELG   I  N
Sbjct: 126 VKRANRAMLRAKKGRVVLISSVVGLLGSAGQANYAASKAGLVGFARSLARELGSRNITFN 185

Query: 209 CISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSK 268
            ++P  V T M           +E+   +   +P              LG         +
Sbjct: 186 VVAPGFVDTDM------TKVLTDEQRANIVSQVP--------------LGRY-ARP---E 221

Query: 269 DIAEAALYLASDESRYVSGHNLVVDGG 295
           +IA    +LASD++ Y++G  + VDGG
Sbjct: 222 EIAATVRFLASDDASYITGAVIPVDGG 248

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 Length = 328

 Score =  177 bits (450), Expect = 9e-54
 Identities = 62/314 (19%), Positives = 106/314 (33%), Gaps = 70/314 (22%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVI---------ADVEDTL-----GSVLA- 72
                VA++TG A+ +G +        G  V +           +  TL      S +  
Sbjct: 43  APTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITV 102

Query: 73  ------STLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSI 126
                    AP         V+L      L+ +  + +GR D+L NNA           +
Sbjct: 103 QADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSF----YPTPL 158

Query: 127 IDFDADEFD--------------NVMRVNVKGMALGIKHAARVMINRG------GGCIIS 166
           +  D D  +              ++   N       IK  A  +             II+
Sbjct: 159 LRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIIN 218

Query: 167 TASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRN 226
                     LG   YT +K A+ GLT++AA EL    IRVN + P G  + +       
Sbjct: 219 MVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGP-G-LSVL------V 270

Query: 227 SGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVS 286
                   E     +P                 L      + ++++  ++L S +++Y++
Sbjct: 271 DDMPPAVWEGHRSKVP-----------------LYQRDSSAAEVSDVVIFLCSSKAKYIT 313

Query: 287 GHNLVVDGGVTTSR 300
           G  + VDGG + +R
Sbjct: 314 GTCVKVDGGYSLTR 327

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G Length = 244

 Score =  173 bits (442), Expect = 2e-53
 Identities = 71/268 (26%), Positives = 125/268 (46%), Gaps = 32/268 (11%)

Query: 32  KVAIITGGARGIGEAAVRLFARHGAKVVIADV--EDTLGSVLAS-TLAPAPVTFVHCDVS 88
            V ++TG +RGIG+A      + G KV++           V                DVS
Sbjct: 2   PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVS 61

Query: 89  LEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALG 148
            E D+E ++ + +  +G +D++ NNAG+     +   +I     ++D V+ +N+ G+ L 
Sbjct: 62  KEADVEAMMKTAIDAWGTIDVVVNNAGIT----RDTLLIRMKKSQWDEVIDLNLTGVFLC 117

Query: 149 IKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVN 208
            + A ++M+ +  G II+ ASV G++G +G   Y A+K  ++G +K AA E     I VN
Sbjct: 118 TQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVN 177

Query: 209 CISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSK 268
            + P  +A+ M       +  GE+ ++ +   IP              LG   G     +
Sbjct: 178 VVCPGFIASDMT------AKLGEDMEKKILGTIP--------------LGRT-GQP---E 213

Query: 269 DIAEAALYLA-SDESRYVSGHNLVVDGG 295
           ++A    +LA S  + Y++G    +DGG
Sbjct: 214 NVAGLVEFLALSPAASYITGQAFTIDGG 241

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score =  182 bits (464), Expect = 3e-53
 Identities = 66/282 (23%), Positives = 114/282 (40%), Gaps = 53/282 (18%)

Query: 25  SHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPV---- 80
           S    + KV IITG   G+G+     FA+ GAKVV+ D+   L     ++ A   V    
Sbjct: 2   SPVDFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEI 61

Query: 81  -------TFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADE 133
                     + +V    D + ++ + V  +G + ++ NNAG+L +     S+      +
Sbjct: 62  VKNGGVAVADYNNVL---DGDKIVETAVKNFGTVHVIINNAGILRD----ASMKKMTEKD 114

Query: 134 FDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLT 193
           +  V+ V++ G     K A      +  G I++T+S AG+ G  G   Y ++K A++G  
Sbjct: 115 YKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNFGQANYASAKSALLGFA 174

Query: 194 KNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEF 253
           +  A E  +Y I+ N I+P    + M                     I     + K+   
Sbjct: 175 ETLAKEGAKYNIKANAIAPLA-RSRMTE------------------SIMPPPMLEKLGP- 214

Query: 254 VSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
                         + +A   LYL+S E+  ++G    V  G
Sbjct: 215 --------------EKVAPLVLYLSSAEN-ELTGQFFEVAAG 241

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score =  161 bits (408), Expect = 3e-45
 Identities = 72/268 (26%), Positives = 122/268 (45%), Gaps = 41/268 (15%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDV 87
            L+ KV +ITG   G+G+   + FA++GAKVV+ D +D   +V     A         DV
Sbjct: 319 SLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKTVDEIKAAGGEAWPDQHDV 378

Query: 88  SLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMAL 147
           +  +D E +I + + +YG +DIL NNAG+L    + +S       E+D+V +V++ G   
Sbjct: 379 A--KDSEAIIKNVIDKYGTIDILVNNAGIL----RDRSFAKMSKQEWDSVQQVHLIGTFN 432

Query: 148 GIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRV 207
             + A    + +  G II+  S +G+ G  G   Y++SK  I+GL+K  A E  +  I+V
Sbjct: 433 LSRLAWPYFVEKQFGRIINITSTSGIYGNFGQANYSSSKAGILGLSKTMAIEGAKNNIKV 492

Query: 208 NCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRS 267
           N ++P    T+M ++           ++  N                             
Sbjct: 493 NIVAPHA-ETAMTLSIM--------REQDKNLYHAD------------------------ 519

Query: 268 KDIAEAALYLASDESRYVSGHNLVVDGG 295
             +A   +YL +D+   V+G    + GG
Sbjct: 520 -QVAPLLVYLGTDDV-PVTGETFEIGGG 545

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... Length = 286

 Score =  172 bits (437), Expect = 3e-52
 Identities = 47/208 (22%), Positives = 78/208 (37%), Gaps = 10/208 (4%)

Query: 27  RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADV-EDTLGSVLA--STLAPAPVTFV 83
             L+GK  I+TG ++GIG       A+ GA VV+    ++TL  V++    L  A   ++
Sbjct: 24  EMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYI 83

Query: 84  HCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVK 143
              +      E  +       G LD+L  N           ++   D       M VN  
Sbjct: 84  AGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITN----TSLNLFHDDIHHVRKSMEVNFL 139

Query: 144 GMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELG-- 201
              +    A   M+ +  G I+  +S+AG +      AY+ASK A+ G   +   E    
Sbjct: 140 SYVVLTVAALP-MLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVS 198

Query: 202 RYGIRVNCISPFGVATSMLVNAWRNSGD 229
           R  + +       + T   + A      
Sbjct: 199 RVNVSITLCVLGLIDTETAMKAVSGIVH 226

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A Length = 454

 Score =  175 bits (447), Expect = 5e-52
 Identities = 78/290 (26%), Positives = 122/290 (42%), Gaps = 38/290 (13%)

Query: 12  QGIHVLAWDDAPPS--HRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGS 69
           Q   V A D  PP+   + L+GKVA++TG ARGIG     +FAR GA VV  DV+     
Sbjct: 192 QVFRVGAADSTPPADWDKPLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGA-AE 250

Query: 70  VLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYG-RLDILYNNAGVLGNQRKHKSIID 128
            L         T +  DV+ ++ ++ +       +G ++DIL NNAG+     + K + +
Sbjct: 251 DLKRVADKVGGTALTLDVTADDAVDKITAHVTEHHGGKVDILVNNAGIT----RDKLLAN 306

Query: 129 FDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHA 188
            D   +D V+ VN+       +          GG +I  +S+AG+ G  G   Y  +K  
Sbjct: 307 MDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNRGQTNYATTKAG 366

Query: 189 IVGLTKNAACELGRYGIRVNCISPFGVATSM---LVNAWRNSGDGEEEDECMNFGIPSQK 245
           ++GL +  A  L   GI +N ++P  + T M   +              E         +
Sbjct: 367 MIGLAEALAPVLADKGITINAVAPGFIETKMTEAI---------PLATREVGRRLNSLFQ 417

Query: 246 EVRKMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
                       G       +  D+AE   Y AS  S  V+G+ + V G 
Sbjct: 418 -----------GG-------QPVDVAELIAYFASPASNAVTGNTIRVCGQ 449

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* Length = 319

 Score =  170 bits (432), Expect = 4e-51
 Identities = 64/279 (22%), Positives = 110/279 (39%), Gaps = 53/279 (18%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPV------- 80
           R +G+V ++TG   G+G A    FA  GA VV+ D+      V   + A   V       
Sbjct: 6   RFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRR 65

Query: 81  ----TFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDN 136
                  +  V   E  E L+ + +  +GR+D++ NNAG+L    + +S      +++D 
Sbjct: 66  GGKAVANYDSV---EAGEKLVKTALDTFGRIDVVVNNAGIL----RDRSFSRISDEDWDI 118

Query: 137 VMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNA 196
           + RV+++G     + A   M  +  G II TAS +G+ G  G   Y+A+K  ++GL    
Sbjct: 119 IQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQANYSAAKLGLLGLANTL 178

Query: 197 ACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSG 256
             E  +  I  N I+P    + M                     +  +  V  +      
Sbjct: 179 VIEGRKNNIHCNTIAPNA-GSRMTE------------------TVMPEDLVEAL------ 213

Query: 257 LGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
                    + + +A   L+L  +     +G    V  G
Sbjct: 214 ---------KPEYVAPLVLWLCHESC-EENGGLFEVGAG 242

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} Length = 234

 Score =  167 bits (425), Expect = 5e-51
 Identities = 70/253 (27%), Positives = 103/253 (40%), Gaps = 43/253 (16%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADV-EDTLGSVLASTLAPAPVTFVHCD 86
                  +ITG +RGIGEA  RL    G +V +    E  L + LA+ L  A    +  D
Sbjct: 2   EGMKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQA-LAAELEGA--LPLPGD 58

Query: 87  VSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMA 146
           V  E D    + +    +G L  L NNAGV       K + +   +E+  V+  N+ G  
Sbjct: 59  VREEGDWARAVAAMEEAFGELSALVNNAGVG----VMKPVHELTLEEWRLVLDTNLTGAF 114

Query: 147 LGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIR 206
           LGI+HA   ++ RGGG I++  S+AG     G  AY ASK  ++GL   A  +L    +R
Sbjct: 115 LGIRHAVPALLRRGGGTIVNVGSLAGKNPFKGGAAYNASKFGLLGLAGAAMLDLREANVR 174

Query: 207 VNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLR 266
           V  + P  V T                                   F       +   L+
Sbjct: 175 VVNVLPGSVDT----------------------------------GFAGNTPG-QAWKLK 199

Query: 267 SKDIAEAALYLAS 279
            +D+A+A L+   
Sbjct: 200 PEDVAQAVLFALE 212

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* Length = 259

 Score =  166 bits (423), Expect = 2e-50
 Identities = 53/274 (19%), Positives = 97/274 (35%), Gaps = 36/274 (13%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFAR---HGAKVVI----ADVEDTLGSVLASTLAPAPV 80
            L   V ++TG +RG G A     AR    G+ +++      +   L   L +      V
Sbjct: 3   GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKV 62

Query: 81  TFVHCDVSLEEDIENLINSTVSRYG----RLDILYNNAGVLGNQRKHKSIIDFDADEFDN 136
                D+  E  ++ L+++          +  +L NNA  LG+      +   D  E +N
Sbjct: 63  VLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDV-SKGFLNVNDLAEVNN 121

Query: 137 VMRVNVKGMALGIKHAARVMINRGG--GCIISTASVAGVMGGLGPHAYTASKHAIVGLTK 194
              +N+  M            +  G    +++ +S+  +    G   Y A K A   L +
Sbjct: 122 YWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKGWGLYCAGKAARDMLYQ 181

Query: 195 NAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFV 254
             A E     +RV   +P  +   M   A   S D E            + +++K++   
Sbjct: 182 VLAAEE--PSVRVLSYAPGPLDNDMQQLARETSKDPE-----------LRSKLQKLKS-- 226

Query: 255 SGLGNLKGTTLRSKDIAEAALYLASDESRYVSGH 288
                  G  +     A+  L L   ++ + SG 
Sbjct: 227 ------DGALVDCGTSAQKLLGLLQKDT-FQSGA 253

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} Length = 245

 Score =  166 bits (422), Expect = 2e-50
 Identities = 53/252 (21%), Positives = 87/252 (34%), Gaps = 38/252 (15%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDV 87
            L+ K+A++TG   G+G   V+  +R      +    + L ++            +  D+
Sbjct: 2   SLKKKIAVVTGATGGMGIEIVKDLSRDHIVYALGRNPEHLAALAEIEGVEP----IESDI 57

Query: 88  SLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMAL 147
             E   E  +   +     +D L + A V     +  +I      E+   + +NV   A 
Sbjct: 58  VKEVLEEGGV-DKLKNLDHVDTLVHAAAVA----RDTTIEAGSVAEWHAHLDLNVIVPAE 112

Query: 148 GIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRV 207
             +     +     GC+I   S AG     G   Y ASKHA+ GL      E    GIRV
Sbjct: 113 LSRQLLPALR-AASGCVIYINSGAGNGPHPGNTIYAASKHALRGLADAFRKEEANNGIRV 171

Query: 208 NCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRS 267
           + +SP    T ML       G  + +       I                       +  
Sbjct: 172 STVSPGPTNTPML------QGLMDSQGTNFRPEIY----------------------IEP 203

Query: 268 KDIAEAALYLAS 279
           K+IA A  ++  
Sbjct: 204 KEIANAIRFVID 215

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 Length = 249

 Score =  161 bits (410), Expect = 1e-48
 Identities = 55/269 (20%), Positives = 110/269 (40%), Gaps = 40/269 (14%)

Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVS 88
           +  K  ++   +RGIG A   + ++ GA+V I              L  +   +V CD+ 
Sbjct: 17  IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARN-------EELLKRSGHRYVVCDLR 69

Query: 89  LEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALG 148
                   ++    +   +DIL  NAG      K     +   ++F   +      M   
Sbjct: 70  ------KDLDLLFEKVKEVDILVLNAGG----PKAGFFDELTNEDFKEAIDSLFLNMIKI 119

Query: 149 IKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVN 208
           +++    M  +G G I++  S + +      +   +++ A+ G  K  + E+  YGI VN
Sbjct: 120 VRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEVAPYGITVN 179

Query: 209 CISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSK 268
           C++P    T  +          EE+ + +   IP ++           +        + +
Sbjct: 180 CVAPGWTETERV-----KELLSEEKKKQVESQIPMRR-----------MA-------KPE 216

Query: 269 DIAEAALYLASDESRYVSGHNLVVDGGVT 297
           +IA    +L S+++ Y++G  +VVDGG++
Sbjct: 217 EIASVVAFLCSEKASYLTGQTIVVDGGLS 245

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} Length = 613

 Score =  166 bits (422), Expect = 3e-47
 Identities = 64/207 (30%), Positives = 97/207 (46%), Gaps = 19/207 (9%)

Query: 24  PSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPV--- 80
               R +G+VA++TG   G+G     LFA  GAKVV+ D+  T     AS  A   V   
Sbjct: 12  DGKLRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDE 71

Query: 81  --------TFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDAD 132
                      +  V    D   +I + +  +GR+DIL NNAG+L    + +S++     
Sbjct: 72  IRKAGGEAVADYNSV---IDGAKVIETAIKAFGRVDILVNNAGIL----RDRSLVKTSEQ 124

Query: 133 EFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGL 192
           +++ V  V++KG     + A   M  +  G II T+S +G+ G  G   YTA+K  ++GL
Sbjct: 125 DWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGNFGQVNYTAAKMGLIGL 184

Query: 193 TKNAACELGRYGIRVNCISPFGVATSM 219
               A E  R  +  N I P   A+ M
Sbjct: 185 ANTVAIEGARNNVLCNVIVPTA-ASRM 210

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 Length = 279

 Score =  156 bits (397), Expect = 2e-46
 Identities = 69/262 (26%), Positives = 117/262 (44%), Gaps = 38/262 (14%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIA----DVEDTLGSVLASTLAPAPVTFV 83
           R   ++A++TG + GIG A  R   + G KVV         + L +   S   P  +   
Sbjct: 29  RWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPY 88

Query: 84  HCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVK 143
            CD+S EEDI ++ ++  S++  +DI  NNAG+     +  +++      + ++  VNV 
Sbjct: 89  RCDLSNEEDILSMFSAIRSQHSGVDICINNAGLA----RPDTLLSGSTSGWKDMFNVNVL 144

Query: 144 GMALGIKHAARVMINRGG--GCIISTASVAG--VMGGLGPHAYTASKHAIVGLTKNAACE 199
            +++  + A + M  R    G II+  S++G  V+     H Y+A+K+A+  LT+    E
Sbjct: 145 ALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQE 204

Query: 200 LGRYG--IRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGL 257
           L      IR  CISP  V T        +  D E+                +M+      
Sbjct: 205 LREAQTHIRATCISPGVVETQFAFK--LHDKDPEKAA----------ATYEQMK------ 246

Query: 258 GNLKGTTLRSKDIAEAALYLAS 279
                  L+ +D+AEA +Y+ S
Sbjct: 247 ------CLKPEDVAEAVIYVLS 262

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} Length = 235

 Score =  151 bits (383), Expect = 1e-44
 Identities = 62/255 (24%), Positives = 101/255 (39%), Gaps = 46/255 (18%)

Query: 30  EGKVAIITGGARGIGEAAVRLFARHGAKVVIADV-EDTLGSVLASTLAPAP---VTFVHC 85
           E KVA+ITG +RGIGEA  R  AR G  + +     D L   +A  L       V + H 
Sbjct: 1   EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEK-IAHELMQEQGVEVFYHHL 59

Query: 86  DVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGM 145
           DVS  E +E      + R+G +D++  NAG+       K + +   +EF  ++ VN+ G+
Sbjct: 60  DVSKAESVEEFSKKVLERFGDVDVVVANAGLG----YFKRLEELSEEEFHEMIEVNLLGV 115

Query: 146 ALGIKHAARVMINRGGGCIISTASVAG-VMGGLGPHAYTASKHAIVGLTKNAACELGRYG 204
              +K     +   GG  +++T+ V+  ++   G   Y ++K A   L +    E     
Sbjct: 116 WRTLKAFLDSLKRTGGLALVTTSDVSARLIPYGG--GYVSTKWAARALVRTFQIE--NPD 171

Query: 205 IRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT 264
           +R   + P  V T    +  +     E+                                
Sbjct: 172 VRFFELRPGAVDTYFGGS--KPGKPKEKG------------------------------Y 199

Query: 265 LRSKDIAEAALYLAS 279
           L+  +IAEA   L  
Sbjct: 200 LKPDEIAEAVRCLLK 214

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} Length = 264

 Score =  149 bits (378), Expect = 1e-43
 Identities = 55/255 (21%), Positives = 97/255 (38%), Gaps = 37/255 (14%)

Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIA----DVEDTLGSVLASTLAPAPVTFVH 84
           +  KV +ITG + GIGE   R     GAK+++        + + + +    A        
Sbjct: 2   VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRD--AGGTALAQV 59

Query: 85  CDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKG 144
            DV+    +     + V  +GR+D+L NNAGV+        +     DE++ ++ VN+KG
Sbjct: 60  LDVTDRHSVAAFAQAAVDTWGRIDVLVNNAGVMPLSP----LAAVKVDEWERMIDVNIKG 115

Query: 145 MALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYG 204
           +  GI     +M  +  G II+  S+  +        Y A+K A+  ++     E     
Sbjct: 116 VLWGIGAVLPIMEAQRSGQIINIGSIGALSVVPTAAVYCATKFAVRAISDGLRQE--STN 173

Query: 205 IRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT 264
           IRV C++P  V + +         +     +                         +   
Sbjct: 174 IRVTCVNPGVVESELAGT--ITHEETMAAMDTY-----------------------RAIA 208

Query: 265 LRSKDIAEAALYLAS 279
           L+  DIA A   +  
Sbjct: 209 LQPADIARAVRQVIE 223

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* Length = 247

 Score =  146 bits (371), Expect = 7e-43
 Identities = 71/256 (27%), Positives = 114/256 (44%), Gaps = 34/256 (13%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIA----DVEDTLGSVLASTLAPAPVTFV 83
            L+GKVA+ITG + GIGEA  R  A  GA V IA    +    LG  L +  A A V  +
Sbjct: 4   ALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTA--AGAKVHVL 61

Query: 84  HCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVK 143
             DV+  + ++  + STV   G LDIL NNAG++        + D D  ++  ++  N+ 
Sbjct: 62  ELDVADRQGVDAAVASTVEALGGLDILVNNAGIMLLGP----VEDADTTDWTRMIDTNLL 117

Query: 144 GMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRY 203
           G+    + A   ++ R  G ++  +S+AG +       Y A+K  +   ++    E+   
Sbjct: 118 GLMYMTRAALPHLL-RSKGTVVQMSSIAGRVNVRNAAVYQATKFGVNAFSETLRQEVTER 176

Query: 204 GIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGT 263
           G+RV  I P    T  L     ++   E                   E+ +S +      
Sbjct: 177 GVRVVVIEPGTTDTE-LRGHITHTATKE-----------------MYEQRISQI-----R 213

Query: 264 TLRSKDIAEAALYLAS 279
            L+++DIAEA  Y  +
Sbjct: 214 KLQAQDIAEAVRYAVT 229

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} Length = 266

 Score =  146 bits (372), Expect = 8e-43
 Identities = 61/254 (24%), Positives = 103/254 (40%), Gaps = 32/254 (12%)

Query: 27  RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVI-ADVEDTLGSVLASTLAPAPVTFVHC 85
           R    K+ +ITG + GIGEA  R F+  G  +++ A   + L       L          
Sbjct: 12  RGSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERL-----KALNLPNTLCAQV 66

Query: 86  DVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGM 145
           DV+ +   +  I      YG  D + NNAG++        I   +A+E+  +  VNV G+
Sbjct: 67  DVTDKYTFDTAITRAEKIYGPADAIVNNAGMM----LLGQIDTQEANEWQRMFDVNVLGL 122

Query: 146 ALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGI 205
             G++     M  R  G II+ +S+AG        AY  +K A+  +++N   E+    +
Sbjct: 123 LNGMQAVLAPMKARNCGTIINISSIAGKKTFPDHAAYCGTKFAVHAISENVREEVAASNV 182

Query: 206 RVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL 265
           RV  I+P  V T  L++   +    +                   + +   +    G  L
Sbjct: 183 RVMTIAPSAVKTE-LLSHTTSQQIKD-----------------GYDAWRVDM----GGVL 220

Query: 266 RSKDIAEAALYLAS 279
            + D+A A L+   
Sbjct: 221 AADDVARAVLFAYQ 234

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} Length = 202

 Score =  144 bits (365), Expect = 2e-42
 Identities = 25/189 (13%), Positives = 59/189 (31%), Gaps = 27/189 (14%)

Query: 31  GKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLE 90
               ++ G +  +G A      +    +                        V  D++  
Sbjct: 3   AMKILLIGASGTLGSAVKERLEKKAEVITAGRHSGD----------------VTVDITNI 46

Query: 91  EDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIK 150
           + I+ +      + G++D + +  G          + +   ++    +   + G    + 
Sbjct: 47  DSIKKM----YEQVGKVDAIVSATGSA----TFSPLTELTPEKNAVTISSKLGGQINLVL 98

Query: 151 HAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCI 210
                +     G    T  +      +   +   +  A+    K+AA E+ R GIR+N +
Sbjct: 99  LGIDSL--NDKGSFTLTTGIMMEDPIVQGASAAMANGAVTAFAKSAAIEMPR-GIRINTV 155

Query: 211 SPFGVATSM 219
           SP  +  S 
Sbjct: 156 SPNVLEESW 164

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} Length = 287

 Score =  146 bits (371), Expect = 2e-42
 Identities = 60/260 (23%), Positives = 99/260 (38%), Gaps = 36/260 (13%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHG---AKVVIA----DVEDTLGSVLASTLAPAPV 80
           RL  K  +ITG + GIG+A    +        K+++A    +  + L   +      A V
Sbjct: 30  RLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKV 89

Query: 81  TFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAG-VLGNQRKHKSIIDFDADEFDNVMR 139
                D++  E I+  I +    +  +DIL NNAG  LG+      +     ++  +V  
Sbjct: 90  HVAQLDITQAEKIKPFIENLPQEFKDIDILVNNAGKALGSD----RVGQIATEDIQDVFD 145

Query: 140 VNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACE 199
            NV  +    +    +   +  G I++  S+AG         Y ASK A+   T +   E
Sbjct: 146 TNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAYPTGSIYCASKFAVGAFTDSLRKE 205

Query: 200 LGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGN 259
           L    IRV  I+P  V T   +   R  G+ E                 + +        
Sbjct: 206 LINTKIRVILIAPGLVETEFSLV--RYRGNEE-----------------QAKNVYKDT-- 244

Query: 260 LKGTTLRSKDIAEAALYLAS 279
              T L + D+A+  +Y  S
Sbjct: 245 ---TPLMADDVADLIVYATS 261

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} Length = 272

 Score =  141 bits (358), Expect = 1e-40
 Identities = 59/261 (22%), Positives = 99/261 (37%), Gaps = 31/261 (11%)

Query: 22  APPSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVI-ADVEDTLGSVLASTLAPAPV 80
                         ITG   G GEA  R FA  G  +V+    E+ L ++     A   V
Sbjct: 12  GLVPRGSHMSSTLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRV 71

Query: 81  TFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGV-LGNQRKHKSIIDFDADEFDNVMR 139
             +  DV     +   +++    +  L  L NNAG+ LG           D D++D ++ 
Sbjct: 72  LPLTLDVRDRAAMSAAVDNLPEEFATLRGLINNAGLALGTD----PAQSCDLDDWDTMVD 127

Query: 140 VNVKGMALGIKHAARVMINRG-GGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAAC 198
            N+KG+    +     +I  G G  I++  SVAG     G H Y  +K  +   + N  C
Sbjct: 128 TNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPYPGSHVYGGTKAFVEQFSLNLRC 187

Query: 199 ELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLG 258
           +L   G+RV  + P    +   +   R  GD                   + ++  +G  
Sbjct: 188 DLQGTGVRVTNLEPGLCESEFSLV--RFGGDQA-----------------RYDKTYAGA- 227

Query: 259 NLKGTTLRSKDIAEAALYLAS 279
                 ++ +DIAE   ++ +
Sbjct: 228 ----HPIQPEDIAETIFWIMN 244

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} Length = 230

 Score =  140 bits (354), Expect = 2e-40
 Identities = 32/187 (17%), Positives = 73/187 (39%), Gaps = 11/187 (5%)

Query: 32  KVAIITGGARGIGEAAVRLFARHGAKVVI-ADVEDTLGSVLASTLAPAPVTFVHCDVSLE 90
            + +ITG + G+G    +L+   G    +    E  L + + + L    V +   D++  
Sbjct: 2   SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLST-VTNCL-SNNVGYRARDLASH 59

Query: 91  EDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIK 150
           +++E L             + ++AG          + + D ++   ++  N+      ++
Sbjct: 60  QEVEQLFEQL---DSIPSTVVHSAGSGY----FGLLQEQDPEQIQTLIENNLSSAINVLR 112

Query: 151 HAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCI 210
              +   ++    ++   S A          Y A K A+ GL ++   EL    +++  +
Sbjct: 113 ELVKRYKDQPVN-VVMIMSTAAQQPKAQESTYCAVKWAVKGLIESVRLELKGKPMKIIAV 171

Query: 211 SPFGVAT 217
            P G+AT
Sbjct: 172 YPGGMAT 178

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* Length = 248

 Score =  136 bits (344), Expect = 8e-39
 Identities = 59/249 (23%), Positives = 99/249 (39%), Gaps = 31/249 (12%)

Query: 33  VAIITGGARGIGEAAVRLFARHGAKVVI-ADVEDTLGSVLASTLAPAPVTFVHCDVSLEE 91
           + ++TG   G GE   R F + G KV+     ++ L   L   L    +     DV    
Sbjct: 2   IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQE-LKDEL-GDNLYIAQLDVRNRA 59

Query: 92  DIENLINSTVSRYGRLDILYNNAGV-LGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIK 150
            IE ++ S  + +  +DIL NNAG+ LG +           ++++ ++  N KG+    +
Sbjct: 60  AIEEMLASLPAEWCNIDILVNNAGLALGME----PAHKASVEDWETMIDTNNKGLVYMTR 115

Query: 151 HAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCI 210
                M+ R  G II+  S AG     G + Y A+K  +   + N   +L    +RV  I
Sbjct: 116 AVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDI 175

Query: 211 SPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSKDI 270
            P  V  +   N  R  GD                   K E+            L  +D+
Sbjct: 176 EPGLVGGTEFSNV-RFKGDDG-----------------KAEKTYQNT-----VALTPEDV 212

Query: 271 AEAALYLAS 279
           +EA  ++++
Sbjct: 213 SEAVWWVST 221

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} Length = 207

 Score =  129 bits (327), Expect = 8e-37
 Identities = 39/188 (20%), Positives = 72/188 (38%), Gaps = 21/188 (11%)

Query: 34  AIITGGARGIGEAAVRLFARHGAKVVIA--DVEDTLGSVLASTLAPAPVTFVHCDVSLEE 91
            +ITG   G+G A  R     G  ++++           LA          +  D++ E 
Sbjct: 3   VLITGATGGLGGAFARALK--GHDLLLSGRRAG-----ALAELAREVGARALPADLADEL 55

Query: 92  DIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKH 151
           + + L    +   G LD+L +  G  G      S+ +   D  + ++  ++   A  +KH
Sbjct: 56  EAKAL----LEEAGPLDLLVHAVGKAG----RASVREAGRDLVEEMLAAHLLTAAFVLKH 107

Query: 152 AARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCIS 211
                  + G   +   +    +   G  AY A+K A+    + A  EL R G+ +  + 
Sbjct: 108 ----ARFQKGARAVFFGAYPRYVQVPGFAAYAAAKGALEAYLEAARKELLREGVHLVLVR 163

Query: 212 PFGVATSM 219
              VAT +
Sbjct: 164 LPAVATGL 171

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} Length = 324

 Score =  123 bits (310), Expect = 4e-33
 Identities = 55/265 (20%), Positives = 96/265 (36%), Gaps = 24/265 (9%)

Query: 30  EGKVAIITGGARGIGEAAVRLFARHGAKVV-----IADVEDTLGSVLASTLAPAPVTF-- 82
             K+ +ITG + G G       A  G +V      I     +    +A       V    
Sbjct: 4   SKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRT 63

Query: 83  VHCDVSLEEDIENLINSTVSRYGRLDILYNNAG--VLGNQRKHKSIIDFDADEFDNVMRV 140
           +  DV  +  ++  I+  +   GR+D+L +NAG  V G          F  ++F  +  +
Sbjct: 64  LELDVQSQVSVDRAIDQIIGEDGRIDVLIHNAGHMVFG------PAEAFTPEQFAELYDI 117

Query: 141 NVKGMALGIKHAARVMINRGGGCIISTASVAGVMG---GLGPHAYTASKHAIVGLTKNAA 197
           NV       + A   M  +  G +I  +S +   G    L P  Y A+K A+  +    A
Sbjct: 118 NVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGGTPPYLAP--YFAAKAAMDAIAVQYA 175

Query: 198 CELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGL 257
            EL R+GI  + I P    +     A     D          G P+     ++++  + +
Sbjct: 176 RELSRWGIETSIIVPGAFTSGTNHFAHSGVPDDHARQAEYEAG-PNAGLGEEIKKAFAAI 234

Query: 258 GNLKGTTLRSKDIAEAALYLASDES 282
                       +A+A + +    S
Sbjct: 235 VPPDAD---VSLVADAIVRVVGTAS 256

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} Length = 281

 Score =  117 bits (296), Expect = 2e-31
 Identities = 50/196 (25%), Positives = 88/196 (44%), Gaps = 19/196 (9%)

Query: 32  KVAIITGGARGIGEAAVRLFARHGAKVV-----IADVEDTLGSVLASTLAPAPVTFVHCD 86
           KV ++TG + G G A        G  V+        ++D           P     +  D
Sbjct: 6   KVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDD------LVAAYPDRAEAISLD 59

Query: 87  VSLEEDIENLINSTVSRYGRLDILYNNAG--VLGNQRKHKSIIDFDADEFDNVMRVNVKG 144
           V+  E I+ +    ++RYGR+D+L NNAG   +G      +  +    E  ++  ++V G
Sbjct: 60  VTDGERIDVVAADVLARYGRVDVLVNNAGRTQVG------AFEETTERELRDLFELHVFG 113

Query: 145 MALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYG 204
            A   +     M  RG G +++ +S  G +   G  AY+A+K A+  L++  A E+  +G
Sbjct: 114 PARLTRALLPQMRERGSGSVVNISSFGGQLSFAGFSAYSATKAALEQLSEGLADEVAPFG 173

Query: 205 IRVNCISPFGVATSML 220
           I+V  + P    T++ 
Sbjct: 174 IKVLIVEPGAFRTNLF 189

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... Length = 327

 Score =  115 bits (290), Expect = 3e-30
 Identities = 61/269 (22%), Positives = 99/269 (36%), Gaps = 28/269 (10%)

Query: 32  KVAIITGGARGIGEAAVRLFARHGAK--VVIA------DVEDTLGSVLASTLAPAPVTFV 83
            V +ITG + GIG       A   ++   V A             +  A    P  +  +
Sbjct: 3   TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETL 62

Query: 84  HCDVSLEEDIENLINSTVSRYGRLDILYNNAG--VLGNQRKHKSIIDFDADEFDNVMRVN 141
             DV   + +           GR+D+L  NAG  +LG       +     D   +V+ VN
Sbjct: 63  QLDVRDSKSVAAARERVTE--GRVDVLVCNAGLGLLG------PLEALGEDAVASVLDVN 114

Query: 142 VKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELG 201
           V G    ++     M  RG G ++ T SV G+MG      Y ASK A+ GL ++ A  L 
Sbjct: 115 VVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLL 174

Query: 202 RYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLK 261
            +G+ ++ I    V T+ +     +  +  +  +   F    Q      + F     N  
Sbjct: 175 PFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQN-- 232

Query: 262 GTTLRSKDIAEAALYLASDES---RYVSG 287
                 +++AE  L          RY + 
Sbjct: 233 -----PEEVAEVFLTALRAPKPTLRYFTT 256

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} Length = 311

 Score =  111 bits (278), Expect = 1e-28
 Identities = 49/274 (17%), Positives = 89/274 (32%), Gaps = 79/274 (28%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAP---VTFVH 84
             + + A++TGG +GIG    +  + +G  VV+   + T G      L  +    V F  
Sbjct: 9   VTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQ 68

Query: 85  CDV-SLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKH-------------------- 123
            DV      + +L +   + +G+LDIL NNAGV G                         
Sbjct: 69  LDVTDPIATMSSLADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKI 128

Query: 124 ------KSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGL 177
                 + ++    +  +  +++N  G+    +    ++       I++ +S  G +  +
Sbjct: 129 YEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQLSDSPRIVNVSSSTGSLKYV 188

Query: 178 GPH-------------------------------------------AYTASKHAIVGLTK 194
                                                         AYT SK  +   T+
Sbjct: 189 SNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAYTR 248

Query: 195 NAACELGRYGIRVNCISPFGVATSMLVNAWRNSG 228
             A ++     +VNC+ P  V T M        G
Sbjct: 249 VLANKIP--KFQVNCVCPGLVKTEM----NYGIG 276

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250

 Score =  108 bits (273), Expect = 2e-28
 Identities = 38/209 (18%), Positives = 74/209 (35%), Gaps = 24/209 (11%)

Query: 32  KVAIITGGARGIGEAAVRLFARHGAKV-VIADVEDTLGSVLASTLAPAPVTFVHCDVSLE 90
              ++TG  RGIG   V+   +      +IA   D   +    ++  + V  +   V+ +
Sbjct: 4   GSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCD 63

Query: 91  EDIENLINSTVSRYGR--LDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKG---- 144
           + ++  ++      G   L +L NNAGVL     + +  + +       + VN       
Sbjct: 64  KSLDTFVSKVGEIVGSDGLSLLINNAGVLL---SYGTNTEPNRAVIAEQLDVNTTSVVLL 120

Query: 145 -------MALGIKHAARVMINRGGGCIISTASVAGVMG-------GLGPHAYTASKHAIV 190
                  +       +   ++     +I+ +S  G +             AY  SK AI 
Sbjct: 121 TQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKAAIN 180

Query: 191 GLTKNAACELGRYGIRVNCISPFGVATSM 219
              +  A +L    + V    P  V T++
Sbjct: 181 MFGRTLAVDLKDDNVLVVNFCPGWVQTNL 209

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267

 Score =  107 bits (268), Expect = 1e-27
 Identities = 42/208 (20%), Positives = 76/208 (36%), Gaps = 23/208 (11%)

Query: 32  KVAIITGGARGIGEAAVRLFARHGAKV--VIADVEDTLGSVLASTLAPAP--VTFVHCDV 87
              +ITG  RG+G   V+           +     +   +     LA     +  +  D+
Sbjct: 22  NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDL 81

Query: 88  SLEEDIENLIN--STVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKG- 144
              +  + L+     V++   L++L+NNAG+     K   I    + E  + ++ N    
Sbjct: 82  RNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAP---KSARITAVRSQELLDTLQTNTVVP 138

Query: 145 ----------MALGIKHAARVMINRGGGCIISTASVAGVMG---GLGPHAYTASKHAIVG 191
                     +    K      +  G   II+ +S+ G +      G +AY  SK A+  
Sbjct: 139 IMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSALNA 198

Query: 192 LTKNAACELGRYGIRVNCISPFGVATSM 219
            TK+ + +L    I    + P  V T M
Sbjct: 199 ATKSLSVDLYPQRIMCVSLHPGWVKTDM 226

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* Length = 276

 Score = 92.8 bits (231), Expect = 3e-22
 Identities = 49/239 (20%), Positives = 77/239 (32%), Gaps = 58/239 (24%)

Query: 31  GKVAIITGGARGIGEAAVR-LFARHGAKVVIA--DVEDTLGSVLASTLAPAPVTFVHCDV 87
             VA++TGG +GIG A VR L       VV+   DV     +V           F   D+
Sbjct: 4   IHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDI 63

Query: 88  SLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMAL 147
              + I  L +     YG LD+L NNAG+                + +  M+ N      
Sbjct: 64  DDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTP----FHIQAEVTMKTNF----F 115

Query: 148 GIKHAARVMIN--RGGGCIISTASVAGVMG------------------------------ 175
           G +     ++   +  G +++ +S+  V                                
Sbjct: 116 GTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFV 175

Query: 176 -----------GLGPHAYTASKHAIVGLTKNAACELGRY----GIRVNCISPFGVATSM 219
                      G    AY  +K  +  L++  A +L        I +N   P  V T M
Sbjct: 176 EDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDM 234

>4alk_A ENR, enoyl-[acyl-carrier-protein] reductase [NADPH]; oxidoreductase, short-chain dehydrogenase/reductase superfam fatty acid biosynthesis; HET: NAP E9P GLU; 1.90A {Staphylococcus aureus} PDB: 4alj_A* 4ali_A* 4alm_A 4aln_A 3gr6_A* 3gns_A* 3gnt_A 4all_A* Length = 282

 Score = 80.4 bits (199), Expect = 9e-18
 Identities = 60/284 (21%), Positives = 99/284 (34%), Gaps = 53/284 (18%)

Query: 29  LEGKVAIITGGA--RGIGEAAVRLFARHGAKVVIADVEDTLGS---VLASTLAPAPVTFV 83
           LE K  +I G A  R I     ++  + GAK+V    ++        L   L        
Sbjct: 30  LENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLY 89

Query: 84  HCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNV- 142
             DV  +E++ N         G +D +Y++      +       +   + F     ++  
Sbjct: 90  QIDVQSDEEVINGFEQIGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSY 149

Query: 143 --KGMALGIKHAARVMINRGGGCIISTASVAG---------VMGGLGPHAYTASKHAIVG 191
               +A    H A+ ++  GG  +    +  G         VMG         +K ++  
Sbjct: 150 SLTIVA----HEAKKLMPEGGSIV--ATTYLGGEFAVQNYNVMG--------VAKASLEA 195

Query: 192 LTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKME 251
             K  A +LG   IRVN IS   + T  L                   G+     + K  
Sbjct: 196 NVKYLALDLGPDNIRVNAISAGPIRT--LSAK----------------GVGGFNTILKEI 237

Query: 252 EFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
           E  + L   +       ++ + A YL SD S  V+G N+ VD G
Sbjct: 238 EERAPLK--RNVDQ--VEVGKTAAYLLSDLSSGVTGENIHVDSG 277

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* Length = 266

 Score = 79.5 bits (197), Expect = 2e-17
 Identities = 68/284 (23%), Positives = 109/284 (38%), Gaps = 53/284 (18%)

Query: 29  LEGKVAIITGGA--RGIGEAAVRLFARHGAKVVIADVEDTLGS-V--LASTLAPAPVTFV 83
           LEG+  ++ G A  R I     R     GA+++     + L   V  LA TL       +
Sbjct: 5   LEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIIL 64

Query: 84  HCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNV- 142
            CDV+ + +IE    S   + G +  + +       +      ++ + D F     ++  
Sbjct: 65  PCDVTNDAEIETCFASIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSY 124

Query: 143 --KGMALGIKHAARVMINRGGGCIISTASVAG---------VMGGLGPHAYTASKHAIVG 191
               +      AAR M+  GG  +  T +  G         VMG         +K ++  
Sbjct: 125 SLTAVV----KAARPMMTEGGSIV--TLTYLGGELVMPNYNVMG--------VAKASLDA 170

Query: 192 LTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKME 251
             K  A +LG+  IRVN IS   + T  L                   GI     + K  
Sbjct: 171 SVKYLAADLGKENIRVNSISAGPIRT--LSAK----------------GISDFNSILKDI 212

Query: 252 EFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
           E  + L   + TT   +++ + A +L SD SR ++G NL VD G
Sbjct: 213 EERAPLR--RTTTP--EEVGDTAAFLFSDMSRGITGENLHVDSG 252

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 2jjy_A* Length = 280

 Score = 78.4 bits (194), Expect = 4e-17
 Identities = 59/285 (20%), Positives = 103/285 (36%), Gaps = 54/285 (18%)

Query: 29  LEGKVAIITGGA--RGIGEAAVRLFARHGAKVVIADVEDTLGSV--LASTLAPAPVTFVH 84
           L GK  +ITG    + I     +   R GA++    V      V  L +   PA V  + 
Sbjct: 24  LAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCAEFNPAAV--LP 81

Query: 85  CDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDF-DADEFDNVMRVNV- 142
           CDV  +++I++L       +  LD + ++       +   + ID    + F     ++  
Sbjct: 82  CDVISDQEIKDLFVELGKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAY 141

Query: 143 --KGMALGIKHAARVMINRGGGCIISTASVAG---------VMGGLGPHAYTASKHAIVG 191
               +A   K    +M NR    +    +  G          MG         +K ++  
Sbjct: 142 SFAALA---KEGRSMMKNRNASMV--ALTYIGAEKAMPSYNTMG--------VAKASLEA 188

Query: 192 LTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKME 251
             +  A  LG  GI+VN +S   + T  L  +                GI + K++    
Sbjct: 189 TVRYTALALGEDGIKVNAVSAGPIKT--LAAS----------------GISNFKKMLDYN 230

Query: 252 EFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGV 296
             VS L   K   +   ++     +L SD +  ++G  + VD G 
Sbjct: 231 AMVSPLK--KNVDI--MEVGNTVAFLCSDMATGITGEVVHVDAGY 271

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* Length = 261

 Score = 77.6 bits (192), Expect = 7e-17
 Identities = 56/282 (19%), Positives = 98/282 (34%), Gaps = 51/282 (18%)

Query: 29  LEGKVAIITGGA--RGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFV-HC 85
           L GK A++ G    R +G A        GA+V ++   + L               +   
Sbjct: 6   LSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRA 65

Query: 86  DVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNV--- 142
           DV+ +E+++ L       +G LD L +       +      ID    ++   + V+    
Sbjct: 66  DVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSL 125

Query: 143 KGMALGIKHAARVMINRGGGCIISTASVAG---------VMGGLGPHAYTASKHAIVGLT 193
             +A      A  ++  GGG +  T +            VM          +K A+    
Sbjct: 126 VAVA----RRAEPLLREGGGIV--TLTYYASEKVVPKYNVMA--------IAKAALEASV 171

Query: 194 KNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEF 253
           +  A ELG  G+RVN IS   V T  +                    IP   ++      
Sbjct: 172 RYLAYELGPKGVRVNAISAGPVRT--VAAR----------------SIPGFTKMYDRVAQ 213

Query: 254 VSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
            + L   +  T   +++    L+L S  +  ++G  + VD G
Sbjct: 214 TAPLR--RNITQ--EEVGNLGLFLLSPLASGITGEVVYVDAG 251

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... Length = 269

 Score = 76.9 bits (190), Expect = 1e-16
 Identities = 54/288 (18%), Positives = 96/288 (33%), Gaps = 48/288 (16%)

Query: 29  LEGKVAIITGGA--RGIGEAAVRLFARHGAKVVIADV-EDTLGSVLASTLAPAPVTFVHC 85
           L+GK  +++G      I     R+    GA++V+       L   +   L PA    +  
Sbjct: 5   LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRL-PAKAPLLEL 63

Query: 86  DVSLEEDIENLINSTVSRYG---RLDIL-----YNNAGVLGNQRKHKSIIDFDADEFDNV 137
           DV  EE + +L        G   +LD +     +     +G         D    +    
Sbjct: 64  DVQNEEHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINP----FFDAPYADVSKG 119

Query: 138 MRVNV---KGMALGIKHAARVMINRGGGCIIST--ASVA----GVMGGLGPHAYTASKHA 188
           + ++      MA     A   ++N GG  +      S A      M          +K A
Sbjct: 120 IHISAYSYASMA----KALLPIMNPGGSIVGMDFDPSRAMPAYNWMT--------VAKSA 167

Query: 189 IVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVR 248
           +  + +  A E G+YG+R N ++   + T   +      G    E+             +
Sbjct: 168 LESVNRFVAREAGKYGVRSNLVAAGPIRT---LAMSAIVGGALGEEAGAQI--------Q 216

Query: 249 KMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGV 296
            +EE       +      +  +A+    L SD     +G  +  DGG 
Sbjct: 217 LLEEGWDQRAPIGWNMKDATPVAKTVCALLSDWLPATTGDIIYADGGA 264

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} Length = 285

 Score = 76.1 bits (188), Expect = 3e-16
 Identities = 72/284 (25%), Positives = 113/284 (39%), Gaps = 54/284 (19%)

Query: 29  LEGKVAIITGGA--RGIGEAAVRLFARHGAKVVIADVEDTLGS---VLASTLAPAPVTFV 83
           LEGK A+ITG A  R I     + F R GA++        L      +A       V  V
Sbjct: 19  LEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFGSDLV--V 76

Query: 84  HCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNV- 142
            CDVSL+EDI+NL       +G LDI+ ++      +     +ID   + F   M ++V 
Sbjct: 77  KCDVSLDEDIKNLKKFLEENWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVY 136

Query: 143 --KGMALGIKHAARVMINRGGGCIISTASVAG---------VMGGLGPHAYTASKHAIVG 191
               +          ++    G I+ T S  G         VMG         +K A+  
Sbjct: 137 SLIALT----RELLPLMEGRNGAIV-TLSYYGAEKVVPHYNVMG--------IAKAALES 183

Query: 192 LTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKME 251
             +  A ++ ++G R+N IS   V T  L                    I     + +  
Sbjct: 184 TVRYLAYDIAKHGHRINAISAGPVKT--LAAY----------------SITGFHLLMEHT 225

Query: 252 EFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
             V+  G  K  T+  +D+ + A++L SD +R ++G  + VD G
Sbjct: 226 TKVNPFG--KPITI--EDVGDTAVFLCSDWARAITGEVVHVDNG 265

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* Length = 275

 Score = 75.3 bits (186), Expect = 5e-16
 Identities = 67/284 (23%), Positives = 112/284 (39%), Gaps = 55/284 (19%)

Query: 29  LEGKVAIITGGA--RGIGEAAVRLFARHGAKVVIADVEDTLGS-V--LASTLAPAPVTFV 83
           L+GK  +I G A  + I     +     GA +    + ++L   V  +A  L    V   
Sbjct: 4   LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYV--Y 61

Query: 84  HCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNV- 142
             DVS EE  ++L NS     G LD + ++      +    S+++     F+  M ++V 
Sbjct: 62  ELDVSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVY 121

Query: 143 --KGMALGIKHAARVMINRGGGCIISTASVAG---------VMGGLGPHAYTASKHAIVG 191
               +     +  + ++N G   +  T S  G         VMG         +K A+  
Sbjct: 122 SLIELT----NTLKPLLNNGASVL--TLSYLGSTKYMAHYNVMG--------LAKAALES 167

Query: 192 LTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKME 251
             +  A +LG++ IRVN +S   + T  L ++                GI   + + K  
Sbjct: 168 AVRYLAVDLGKHHIRVNALSAGPIRT--LASS----------------GIADFRMILKWN 209

Query: 252 EFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
           E  + L   K  +L  +++  A +YL S  S  VSG    VD G
Sbjct: 210 EINAPLR--KNVSL--EEVGNAGMYLLSSLSSGVSGEVHFVDAG 249

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* Length = 293

 Score = 74.2 bits (183), Expect = 2e-15
 Identities = 66/282 (23%), Positives = 103/282 (36%), Gaps = 51/282 (18%)

Query: 29  LEGKVAIITGGA--RGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFV-HC 85
           L+GK  +I G A  R I     +     GA++      D L   +             HC
Sbjct: 29  LQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELGAFVAGHC 88

Query: 86  DVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNV--- 142
           DV+    I+ +  +   ++G+LD L +  G           ID     F N M ++V   
Sbjct: 89  DVADAASIDAVFETLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSL 148

Query: 143 KGMALGIKHAARVMINRGGGCIISTASVAG---------VMGGLGPHAYTASKHAIVGLT 193
             ++      A  ++  GG  +  T +  G         VMG         +K A+    
Sbjct: 149 TAVS----RRAEKLMADGGSIL--TLTYYGAEKVMPNYNVMG--------VAKAALEASV 194

Query: 194 KNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEF 253
           K  A +LG   IRVN IS   + T  L  +                GI   + + K  E+
Sbjct: 195 KYLAVDLGPQNIRVNAISAGPIKT--LAAS----------------GIGDFRYILKWNEY 236

Query: 254 VSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
            + L   +  T+   ++ +  LY  SD SR V+G     D G
Sbjct: 237 NAPLR--RTVTI--DEVGDVGLYFLSDLSRSVTGEVHHADSG 274

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* Length = 296

 Score = 74.2 bits (183), Expect = 2e-15
 Identities = 69/279 (24%), Positives = 102/279 (36%), Gaps = 45/279 (16%)

Query: 29  LEGKVAIITGGA--RGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFV-HC 85
           +EGK  +I G A  + +     +     GA+V +  + +T    +        V     C
Sbjct: 28  MEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGVKLTVPC 87

Query: 86  DVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGM 145
           DVS  E ++N+       +G LD + +              +D     F   M ++    
Sbjct: 88  DVSDAESVDNMFKVLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSF 147

Query: 146 ALGIKHAARVMINRGGGCIISTASVAG---------VMGGLGPHAYTASKHAIVGLTKNA 196
                 A  +M    GG I+ T S  G         VMG          K A+    K  
Sbjct: 148 TYIASKAEPLM--TNGGSIL-TLSYYGAEKVVPHYNVMG--------VCKAALEASVKYL 196

Query: 197 ACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSG 256
           A +LG+  IRVN IS   V T  L ++                GI     +    ++ S 
Sbjct: 197 AVDLGKQQIRVNAISAGPVRT--LASS----------------GISDFHYILTWNKYNSP 238

Query: 257 LGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
           L   + TTL   D+  AALYL SD  R  +G  + VD G
Sbjct: 239 LR--RNTTL--DDVGGAALYLLSDLGRGTTGETVHVDCG 273

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* Length = 265

 Score = 73.0 bits (180), Expect = 4e-15
 Identities = 63/283 (22%), Positives = 105/283 (37%), Gaps = 52/283 (18%)

Query: 29  LEGKVAIITGGA--RGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFV-HC 85
           L GK  ++TG A    I     +   R GA++      D L   +    A      V  C
Sbjct: 7   LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQC 66

Query: 86  DVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADE-FDNVMRVNV-- 142
           DV+ +  I+ +       + + D   ++ G     +     ++    E F     ++   
Sbjct: 67  DVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYS 126

Query: 143 -KGMALGIKHAARVMINRGGGCIISTASVAG---------VMGGLGPHAYTASKHAIVGL 192
              MA     A R M+N G   +  T S  G         VMG         +K ++   
Sbjct: 127 FVAMA----KACRSMLNPGSALL--TLSYLGAERAIPNYNVMG--------LAKASLEAN 172

Query: 193 TKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEE 252
            +  A  +G  G+RVN IS   + T  L  +                GI   +++    E
Sbjct: 173 VRYMANAMGPEGVRVNAISAGPIRT--LAAS----------------GIKDFRKMLAHCE 214

Query: 253 FVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
            V+ +   +  T+  +D+  +A +L SD S  +SG  + VDGG
Sbjct: 215 AVTPIR--RTVTI--EDVGNSAAFLCSDLSAGISGEVVHVDGG 253

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} Length = 271

 Score = 72.2 bits (178), Expect = 6e-15
 Identities = 63/285 (22%), Positives = 102/285 (35%), Gaps = 56/285 (19%)

Query: 29  LEGKVAIITGGA--RGIGEAAVRLFARHGAKVVIADVEDTLGS---VLASTLAPAPVTFV 83
           L+GK  ++TG    R I     +   R GA++    V D         A+      V   
Sbjct: 12  LDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSELV--F 69

Query: 84  HCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDF-DADEFDNVMRVNV 142
            CDV+ +  I+ L  S  + +  LD L ++ G    +      +D    + F     ++ 
Sbjct: 70  PCDVADDAQIDALFASLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISA 129

Query: 143 ---KGMALGIKHAARVMINRGGGCIISTASVAG---------VMGGLGPHAYTASKHAIV 190
                +A     AA  M++     +  T S  G          MG         +K A+ 
Sbjct: 130 YSFPALA----KAALPMLSDDASLL--TLSYLGAERAIPNYNTMG--------LAKAALE 175

Query: 191 GLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKM 250
              +  A  LG  G+RVN IS   + T  L  +                GI S  ++   
Sbjct: 176 ASVRYLAVSLGAKGVRVNAISAGPIKT--LAAS----------------GIKSFGKILDF 217

Query: 251 EEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
            E  S L   +  T+  + +  A  +L SD +  V+   + VD G
Sbjct: 218 VESNSPLK--RNVTI--EQVGNAGAFLLSDLASGVTAEVMHVDSG 258

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} Length = 291

 Score = 68.8 bits (169), Expect = 1e-13
 Identities = 25/89 (28%), Positives = 37/89 (41%), Gaps = 5/89 (5%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDV 87
               +  +ITG   G+G    R  AR GA V++A V DT     A+      V     D+
Sbjct: 13  SFAQRTVVITGANSGLGAVTARELARRGATVIMA-VRDTRKGEAAARTMAGQVEVRELDL 71

Query: 88  SLEEDIENLINSTVSRYGRLDILYNNAGV 116
               D+ + +          D+L NNAG+
Sbjct: 72  Q---DLSS-VRRFADGVSGADVLINNAGI 96

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... Length = 329

 Score = 60.7 bits (147), Expect = 9e-11
 Identities = 56/336 (16%), Positives = 110/336 (32%), Gaps = 85/336 (25%)

Query: 31  GKVAIITGGA--RGIGEAAVRLFARHGAKVVI---------------------ADVEDTL 67
             +  I G     G G    +  ++   K++                        + D  
Sbjct: 2   EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKD 61

Query: 68  GSVLASTLAPAPVTF-------------VHCDVSLEEDIENLINSTVSRYGRLDILYN-- 112
             +    + P   +F                ++     IE++ N    +YG++++L +  
Sbjct: 62  KKMNILDMLPFDASFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSL 121

Query: 113 -NAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIIST---A 168
            NA  +      K +++     + + +  +   +    K+   +M  +    IIS    A
Sbjct: 122 ANAKEV-----QKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIM--KPQSSIISLTYHA 174

Query: 169 SV------AGVMGGLGPHAYTASKHAIVGLTKNAACELGR-YGIRVNCISP--------- 212
           S        G M         ++K A+   T+  A  LGR Y IR+N IS          
Sbjct: 175 SQKVVPGYGGGMS--------SAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAAT 226

Query: 213 ----FGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRS- 267
                        N  +N    +  +   N G   +K++   + +      ++ +   + 
Sbjct: 227 AINKLNNTYENNTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAP 286

Query: 268 -------KDIAEAALYLASDESRYVSGHNLVVDGGV 296
                   DI   A +L S ESR ++G  + VD G+
Sbjct: 287 LRQKLLSTDIGSVASFLLSRESRAITGQTIYVDNGL 322

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* Length = 315

 Score = 58.6 bits (142), Expect = 4e-10
 Identities = 65/315 (20%), Positives = 108/315 (34%), Gaps = 78/315 (24%)

Query: 29  LEGKVAIITGGA--RGIGEAAVRLFARHGAKVVI----------------ADVEDTLGSV 70
           L G+ A + G A   G G A  +  A  GA+V +                  +++     
Sbjct: 7   LRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLP 66

Query: 71  LASTLAPAPVT----------FVHCDVSLEE--------DIENLINSTVSRYGRLDILYN 112
             S +  A V            V  D+   +         I+ +        G +DIL +
Sbjct: 67  DGSLIEFAGVYPLDAAFDKPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVH 126

Query: 113 ---NAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIIST-- 167
              N   +      K +++     +      +       ++H   +M N GG  +  +  
Sbjct: 127 SLANGPEV-----TKPLLETSRKGYLAASSNSAYSFVSLLQHFGPIM-NEGGSAVTLSYL 180

Query: 168 ASV------AGVMGGLGPHAYTASKHAIVGLTKNAACELG-RYGIRVNCISPFGVATSML 220
           A+        G M         ++K A+   T+  A E G +YG+RVN IS   + +   
Sbjct: 181 AAERVVPGYGGGMS--------SAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKS--- 229

Query: 221 VNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSKDIAEAALYLASD 280
             A   S  G             +  +    ++      L+   L S D+  AAL+L S 
Sbjct: 230 RAA---SAIG---------KSGEKSFIDYAIDYSYNNAPLR-RDLHSDDVGGAALFLLSP 276

Query: 281 ESRYVSGHNLVVDGG 295
            +R VSG  L VD G
Sbjct: 277 LARAVSGVTLYVDNG 291

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* Length = 287

 Score = 58.0 bits (140), Expect = 7e-10
 Identities = 14/88 (15%), Positives = 29/88 (32%), Gaps = 8/88 (9%)

Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADV-EDTLGSVLASTLAPAPVTFVHCDV 87
           ++GK A++  G   +G  +  L A  GA+VV+     D   +   S      V     + 
Sbjct: 117 VKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAET 176

Query: 88  SLEEDIENLINSTVSRYGRLDILYNNAG 115
           + +      +            ++    
Sbjct: 177 ADDASRAEAV-------KGAHFVFTAGA 197

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* Length = 297

 Score = 56.6 bits (137), Expect = 2e-09
 Identities = 56/321 (17%), Positives = 94/321 (29%), Gaps = 96/321 (29%)

Query: 29  LEGKVAIITGGA--RGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVT----- 81
           L GK A I G A   G G A  +  A  GA++++      L     S             
Sbjct: 6   LRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLP 65

Query: 82  ---------------------FVHCDV--------SLEEDIENLINSTVSRYGRLDILYN 112
                                 V  DV        S    ++         +G +DIL +
Sbjct: 66  DGSLMEIKKVYPLDAVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVH 125

Query: 113 ---NAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTAS 169
              N   +      K +++     +   +  +     + +      ++N GG  I  T  
Sbjct: 126 SLANGPEV-----SKPLLETSRKGYLAAISASSYSF-VSLLSHFLPIMNPGGASISLT-- 177

Query: 170 VAGVMGGLGPHAYTASKHAI------VGLTKNA--------ACELG-RYGIRVNCISPFG 214
                       Y AS+  I      +   K A        A E G +  IRVN IS   
Sbjct: 178 ------------YIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGP 225

Query: 215 VATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSKDIAEAA 274
           + +                       I     + +     + +      TL + ++  AA
Sbjct: 226 LGS--RAAK----------------AIGFIDTMIEYSYNNAPIQK----TLTADEVGNAA 263

Query: 275 LYLASDESRYVSGHNLVVDGG 295
            +L S  +  ++G  + VD G
Sbjct: 264 AFLVSPLASAITGATIYVDNG 284

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} Length = 319

 Score = 52.5 bits (126), Expect = 4e-08
 Identities = 61/323 (18%), Positives = 103/323 (31%), Gaps = 81/323 (25%)

Query: 29  LEGKVAIITGGA--RGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVT----- 81
           L GK A + G A   G G A  +L    GA+V++               +          
Sbjct: 7   LRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYA 66

Query: 82  ----------------------------------FVHCDVSLEE--------DIENLINS 99
                                              V  +VS  +         I  +  +
Sbjct: 67  QEPSSKVAAEAAEKPVDLVFDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEA 126

Query: 100 TVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINR 159
             +  G++DIL ++          K ++      +   +  +       ++H   +M  +
Sbjct: 127 VRADVGQIDILVHSLAN--GPEVTKPLLQTSRKGYLAAVSSSSYSFVSLLQHFLPLM--K 182

Query: 160 GGGCII------STASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGR-YGIRVNCISP 212
            GG  +      S   + G  GG+       +K A+    +  A E GR   +RVNCIS 
Sbjct: 183 EGGSALALSYIASEKVIPGYGGGMSS-----AKAALESDCRTLAFEAGRARAVRVNCISA 237

Query: 213 FGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSKDIAE 272
             + +     A   S  G             +  +    ++      L+   L S D+  
Sbjct: 238 GPLKS---RAA---SAIG---------KAGDKTFIDLAIDYSEANAPLQ-KELESDDVGR 281

Query: 273 AALYLASDESRYVSGHNLVVDGG 295
           AAL+L S  +R V+G  L VD G
Sbjct: 282 AALFLLSPLARAVTGATLYVDNG 304

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* Length = 317

 Score = 51.9 bits (125), Expect = 7e-08
 Identities = 42/192 (21%), Positives = 73/192 (38%), Gaps = 38/192 (19%)

Query: 35  IITGGARGIG-EAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDI 93
           ++TG +  IG E    L  ++G K VIA   D              + F+  DVS  ++I
Sbjct: 3   LVTGSSGQIGTELVPYLAEKYGKKNVIAS--D------IVQRDTGGIKFITLDVSNRDEI 54

Query: 94  ENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAA 153
           +  +         +D +++ AG+L  +       D          +VN+ G    ++ A 
Sbjct: 55  DRAVEKY-----SIDAIFHLAGILSAK----GEKDPALA-----YKVNMNGTYNILEAAK 100

Query: 154 RVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIV-----GLTKNAACELGR-----Y 203
           +  + +     +   S  GV G   P     S          G+TK AA  LG+     +
Sbjct: 101 QHRVEK-----VVIPSTIGVFGPETPKNKVPSITITRPRTMFGVTKIAAELLGQYYYEKF 155

Query: 204 GIRVNCISPFGV 215
           G+ V  +   G+
Sbjct: 156 GLDVRSLRYPGI 167

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 49.1 bits (116), Expect = 1e-06
 Identities = 48/298 (16%), Positives = 86/298 (28%), Gaps = 118/298 (39%)

Query: 62  DVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINS--TVSRYGRL-DIL--YNNAGV 116
           DV+D   S+L+                  E+I+++I S   VS   RL   L       V
Sbjct: 37  DVQDMPKSILSK-----------------EEIDHIIMSKDAVSGTLRLFWTLLSKQEEMV 79

Query: 117 ------------------LGNQRKHKSIIDF-----------DADEFD--NVMRV----N 141
                             +  +++  S++             D   F   NV R+     
Sbjct: 80  QKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLK 139

Query: 142 VKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELG 201
           ++   L ++ A  V+I+ G             + G G       K  +        C   
Sbjct: 140 LRQALLELRPAKNVLID-G-------------VLGSG-------KTWVA----LDVCL-- 172

Query: 202 RYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKME-EFVSGLGNL 260
               +V C   F +        W N  +    +  +      QK + +++  + S   + 
Sbjct: 173 --SYKVQCKMDFKI-------FWLNLKNCNSPETVL---EMLQKLLYQIDPNWTSRSDHS 220

Query: 261 KGTTLRSKDIAEAALYLASDESRYVSGHNLVV-------------DGG----VTTSRN 301
               LR   I      L   +  Y   + L+V             +      +TT R 
Sbjct: 221 SNIKLRIHSIQAELRRLLKSK-PYE--NCLLVLLNVQNAKAWNAFNLSCKILLTT-RF 274

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Length = 2512

 Score = 44.5 bits (105), Expect = 3e-05
 Identities = 27/179 (15%), Positives = 54/179 (30%), Gaps = 18/179 (10%)

Query: 15   HVLAWDDAPPSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVI--------ADVEDT 66
              +A      +         +ITGG  G G    +     GA+ ++           +  
Sbjct: 1869 PPIALTGLSKTFCPPHKSY-VITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQAR 1927

Query: 67   LGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSI 126
                         V     + S  +   +LI +  ++ G +  ++N A VL    +   +
Sbjct: 1928 QVREWRR--QGVQVLVSTSNASSLDGARSLI-TEATQLGPVGGVFNLAMVL----RDAVL 1980

Query: 127  IDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTAS 185
             +   + F +V +    G A                  +  +SV+   G  G   Y  +
Sbjct: 1981 ENQTPEFFQDVSKPKYSGTAN--LDRVTREACPELDYFVIFSSVSCGRGNAGQANYGFA 2037

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} Length = 342

 Score = 42.0 bits (99), Expect = 1e-04
 Identities = 37/200 (18%), Positives = 59/200 (29%), Gaps = 41/200 (20%)

Query: 36  ITGGARGIGEAAVRLFARHGA-------KVVIADVEDTLGSVLASTLAPAPVTFVHCDVS 88
           I G A  +G    +   + G+       K  + DV        A       V     D+S
Sbjct: 19  IIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPE----APAGFSGAVDARAADLS 74

Query: 89  LEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALG 148
              + E L+ +      R D++++ A ++  +    + +DFD        R+N+ G    
Sbjct: 75  APGEAEKLVEA------RPDVIFHLAAIVSGE----AELDFDKG-----YRINLDGTRYL 119

Query: 149 IKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIV------GLTKNAACEL-- 200
                      G    +   S   V G   P  Y              G  K A CEL  
Sbjct: 120 FDAIRIANGKDGYKPRVVFTSSIAVFG--APLPYPIPDEFHTTPLTSYGTQK-AICELLL 176

Query: 201 ----GRYGIRVNCISPFGVA 216
                R       I    + 
Sbjct: 177 SDYSRRGFFDGIGIRLPTIC 196

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A* Length = 496

 Score = 42.0 bits (99), Expect = 2e-04
 Identities = 39/184 (21%), Positives = 63/184 (34%), Gaps = 31/184 (16%)

Query: 15  HVLAWDDAPPSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVI--------ADVEDT 66
           H             + G V ++TGG  GIG    R  A  GA  ++        A     
Sbjct: 224 HAAPAVPGSGKRPPVHGSV-LVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAE 282

Query: 67  LGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSI 126
           L + L        VT   CD +  E +  L+ + +     L  ++++AGV  +      +
Sbjct: 283 LRAELEQ--LGVRVTIAACDAADREALAALL-AELPEDAPLTAVFHSAGVAHDDA---PV 336

Query: 127 IDFDADEFDNVMRVNVKG------MALGIKHAARVMINRGGGCIISTASVAGVMGGLGPH 180
            D    + D +MR  +        +   +   A V+           +S A V G  G  
Sbjct: 337 ADLTLGQLDALMRAKLTAARHLHELTADLDLDAFVLF----------SSGAAVWGSGGQP 386

Query: 181 AYTA 184
            Y A
Sbjct: 387 GYAA 390

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A* Length = 486

 Score = 40.1 bits (94), Expect = 6e-04
 Identities = 39/183 (21%), Positives = 63/183 (34%), Gaps = 32/183 (17%)

Query: 16  VLAWDDAPPSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVI--------ADVEDTL 67
           V A   A     +  G V ++TGG  G+G    R  AR GA  ++        AD    L
Sbjct: 212 VRAAAPATDDEWKPTGTV-LVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGEL 270

Query: 68  GSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSII 127
            + L +    A  T   CDV+  E +  L+   +     L  +++ A  L +     ++ 
Sbjct: 271 VAELEA--LGARTTVAACDVTDRESVRELL-GGIGDDVPLSAVFHAAATLDDG----TVD 323

Query: 128 DFDADEFDNVMRVNVKG------MALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHA 181
               +  +   R  V G      +   +   A V+           +S A   G  G   
Sbjct: 324 TLTGERIERASRAKVLGARNLHELTRELDLTAFVLF----------SSFASAFGAPGLGG 373

Query: 182 YTA 184
           Y  
Sbjct: 374 YAP 376

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	305
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	100.0
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	100.0
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	100.0
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	100.0
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	100.0
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	100.0
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	100.0
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	100.0
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	100.0
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	100.0
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	100.0
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	100.0
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	100.0
4dqx_A	277	Probable oxidoreductase protein; structural genomi	100.0
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	100.0
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	100.0
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	100.0
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	100.0
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	100.0
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	100.0
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	100.0
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	100.0
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	100.0
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	100.0
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	100.0
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	100.0
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	100.0
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	100.0
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	100.0
3rih_A	293	Short chain dehydrogenase or reductase; structural	100.0
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	100.0
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	100.0
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	100.0
3imf_A	257	Short chain dehydrogenase; structural genomics, in	100.0
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	100.0
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	100.0
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	100.0
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	100.0
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	100.0
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	100.0
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	100.0
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	100.0
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	100.0
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	100.0
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	100.0
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	100.0
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	100.0
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	100.0
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	100.0
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	100.0
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	100.0
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	100.0
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	100.0
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	100.0
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	100.0
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	100.0
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	100.0
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	100.0
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	100.0
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	100.0
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	100.0
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	100.0
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	100.0
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	100.0
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	100.0
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	100.0
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	100.0
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	100.0
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	100.0
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	100.0
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	100.0
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	100.0
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	100.0
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	100.0
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	100.0
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	100.0
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	100.0
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3cxt_A	291	Dehydrogenase with different specificities; rossma	100.0
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	100.0
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	100.0
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	100.0
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	100.0
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	100.0
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	100.0
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	100.0
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	100.0
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	100.0
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	100.0
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	100.0
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	100.0
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	100.0
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	100.0
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	100.0
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	100.0
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	100.0
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	100.0
1xhl_A	297	Short-chain dehydrogenase/reductase family member	100.0
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	100.0
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	100.0
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	100.0
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	100.0
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	100.0
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	100.0
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	100.0
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	100.0
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	100.0
1xkq_A	280	Short-chain reductase family member (5D234); parra	100.0
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	100.0
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	100.0
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	100.0
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	100.0
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	100.0
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	100.0
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	100.0
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	100.0
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	100.0
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	100.0
4e4y_A	244	Short chain dehydrogenase family protein; structur	100.0
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	100.0
1spx_A	278	Short-chain reductase family member (5L265); paral	100.0
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	100.0
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	100.0
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	100.0
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	100.0
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	100.0
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	100.0
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	100.0
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	100.0
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	100.0
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	100.0
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	100.0
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	100.0
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	100.0
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	100.0
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	100.0
1xq1_A	266	Putative tropinone reducatse; structural genomics,	100.0
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	100.0
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	100.0
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	100.0
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	100.0
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	100.0
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	100.0
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	100.0
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	100.0
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	100.0
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	100.0
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	100.0
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	100.0
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	100.0
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	100.0
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	100.0
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	100.0
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	100.0
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	100.0
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	100.0
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	100.0
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	100.0
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	100.0
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	100.0
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	100.0
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	100.0
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	100.0
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	100.0
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	100.0
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	100.0
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	100.0
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	100.0
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	100.0
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	100.0
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	100.0
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	100.0
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	100.0
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	100.0
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	100.0
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	100.0
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	100.0
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	100.0
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	100.0
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	100.0
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	100.0
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	100.0
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	100.0
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	100.0
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	100.0
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	100.0
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	100.0
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	100.0
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	100.0
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	100.0
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	100.0
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	100.0
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	100.0
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	100.0
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	100.0
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	100.0
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	100.0
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	100.0
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.97
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.96
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.95
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.95
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.95
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.94
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.94
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.93
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.93
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.93
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	99.92
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	99.92
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	99.92
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	99.92
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.92
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	99.92
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.92
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	99.92
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.92
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.91
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.91
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.91
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.9
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.9
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	99.9
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	99.9
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	99.9
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	99.9
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	99.9
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	99.9
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.89
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	99.89
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	99.89
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	99.89
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	99.89
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	99.89
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.88
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	99.88
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.88
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.88
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.88
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	99.88
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.87
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.87
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	99.87
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	99.87
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	99.87
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.87
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.87
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	99.87
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.87
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.87
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	99.87
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.87
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	99.86
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	99.86
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.86
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	99.86
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.86
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.85
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.85
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	99.84
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.84
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	99.84
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.84
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.84
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.84
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.83
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	99.83
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	99.83
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.82
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.82
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	99.82
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.82
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	99.81
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	99.81
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.81
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.8
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.8
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	99.8
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.8
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.78
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	99.78
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.76
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.76
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.75
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	99.71
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.7
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.69
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.66
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.66
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	99.65
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.65
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.62
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.62
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.61
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	99.41
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	99.16
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	99.1
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	98.99
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	98.78
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	98.77
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	98.56
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.52
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.5
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.46
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	98.45
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.4
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	98.39
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.3
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	98.26
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.21
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	98.2
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	98.17
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.17
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	98.16
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	98.15
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	98.13
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	98.13
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	98.11
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	98.1
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	98.08
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	98.07
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	98.06
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	98.03
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	98.0
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	97.93
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	97.93
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	97.86
1id1_A	153	Putative potassium channel protein; RCK domain, E.	97.81
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	97.79
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	97.79
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	97.79
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	97.77
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	97.76
3gms_A	340	Putative NADPH:quinone reductase; structural genom	97.74
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	97.69
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	97.69
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	97.68
4eye_A	342	Probable oxidoreductase; structural genomics, niai	97.67
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	97.66
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	97.64
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	97.61
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	97.58
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	97.56
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	97.51
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	97.5
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	97.48
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	97.47
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	97.47
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	97.46
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	97.44
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	97.43
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	97.43
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	97.4
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.39
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	97.39
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	97.37
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.32
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	97.29
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	97.27
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	97.26
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	97.2
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	97.16
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	97.16
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	97.07
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	97.05
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	97.03
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	97.01
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	97.0
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	96.98
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	96.98
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	96.98
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	96.93
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	96.89
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	96.85
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	96.79
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	96.79
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	96.74
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	96.74
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	96.73
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	96.71
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	96.68
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	96.64
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	96.63
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	96.63
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	96.63
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	96.61
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	96.6
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	96.54
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	96.52
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	96.52
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	96.48
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	96.48
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	96.47
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	96.47
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	96.47
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	96.46
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	96.45
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	96.44
1dih_A	273	Dihydrodipicolinate reductase; oxidoreductase; HET	96.38
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	96.33
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	96.32
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	96.32
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	96.23
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	96.19
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	96.15
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	96.13
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	96.08
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	96.08
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	95.98
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	95.95
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	95.92
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	95.92
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	95.91
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	95.88
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	95.87
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	95.84
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	95.8
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	95.75
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	95.73
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	95.72
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	95.67
3tl2_A	315	Malate dehydrogenase; center for structural genomi	95.65
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	95.64
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	95.58
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	95.52
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	95.46
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	95.45
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	95.43
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	95.4
2raf_A	209	Putative dinucleotide-binding oxidoreductase; NP_7	95.37
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	95.34
3orq_A	377	N5-carboxyaminoimidazole ribonucleotide synthetas;	95.3
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	95.27
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	95.26
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	95.2
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	95.19
3rui_A	340	Ubiquitin-like modifier-activating enzyme ATG7; au	95.15
4g65_A	461	TRK system potassium uptake protein TRKA; structur	95.14
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	95.11
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	95.1
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	95.07
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	95.06
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	95.05
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	95.0
1lnq_A	336	MTHK channels, potassium channel related protein;	94.98
4e4t_A	419	Phosphoribosylaminoimidazole carboxylase, ATPase;	94.93
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	94.89
3pp8_A	315	Glyoxylate/hydroxypyruvate reductase A; structural	94.81
3tri_A	280	Pyrroline-5-carboxylate reductase; amino acid bios	94.8
3dfz_A	223	SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase	94.79
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	94.74
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	94.73
3q2o_A	389	Phosphoribosylaminoimidazole carboxylase, ATPase;	94.72
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	94.65
3lk7_A	451	UDP-N-acetylmuramoylalanine--D-glutamate ligase; a	94.59
3d1l_A	266	Putative NADP oxidoreductase BF3122; structural ge	94.56
3h5n_A	353	MCCB protein; ubiquitin-activating enzyme, microci	94.52
4gsl_A	615	Ubiquitin-like modifier-activating enzyme ATG7; ub	94.46
3gvx_A	290	Glycerate dehydrogenase related protein; NYSGXRC,	94.45
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	94.41
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	94.35
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	94.3
3s2u_A	365	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape	94.25
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	94.18
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	94.15
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	94.11
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	94.0
3l07_A	285	Bifunctional protein fold; structural genomics, ID	93.99
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	93.91
2pi1_A	334	D-lactate dehydrogenase; oxidoreductase, D-LDH, NA	93.89
3vh1_A	598	Ubiquitin-like modifier-activating enzyme ATG7; au	93.88
4g2n_A	345	D-isomer specific 2-hydroxyacid dehydrogenase, Na;	93.85
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	93.84
1f0y_A	302	HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive	93.84
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	93.75
3k5p_A	416	D-3-phosphoglycerate dehydrogenase; niaid, ssgcid,	93.68
4dgs_A	340	Dehydrogenase; structural genomics, PSI-biology, N	93.67
7mdh_A	375	Protein (malate dehydrogenase); chloroplastic mala	93.59
1pjz_A	203	Thiopurine S-methyltransferase; polymorphism, S-ad	93.53
2xxj_A	310	L-LDH, L-lactate dehydrogenase; oxidoreductase, hy	93.47

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=100.00  E-value=1.4e-56  Score=389.06  Aligned_cols=249  Identities=32%  Similarity=0.542  Sum_probs=221.3

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      ++|+||++|||||++|||+++|+.|+++|++|++++|+++..+...+++  .+.++.++.+|++|+++++++++++.+++
T Consensus         3 ~sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~   82 (254)
T 4fn4_A            3 QSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETY   82 (254)
T ss_dssp             GGGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            4789999999999999999999999999999999999988776666554  35679999999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchh
Q 021960          105 GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTA  184 (305)
Q Consensus       105 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~  184 (305)
                      |+||+||||||.....   .++.+++.++|++.+++|+.++|+++|+++|.|++++.|+||++||.++..+.++...|++
T Consensus        83 G~iDiLVNNAGi~~~~---~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~~~~~~~~Y~a  159 (254)
T 4fn4_A           83 SRIDVLCNNAGIMDGV---TPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGGFAGAPYTV  159 (254)
T ss_dssp             SCCCEEEECCCCCCTT---CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCSSSSCHHHHH
T ss_pred             CCCCEEEECCcccCCC---CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcCCCCCChHHHH
Confidence            9999999999976432   5788999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCC
Q 021960          185 SKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT  264 (305)
Q Consensus       185 sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (305)
                      ||+|+.+|+|+||.|++++|||||+|+||+++|+|.......                .+...+.....    ..|.+|+
T Consensus       160 sKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~----------------~~~~~~~~~~~----~~~~~R~  219 (254)
T 4fn4_A          160 AKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKP----------------SELGMRTLTKL----MSLSSRL  219 (254)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCSSC----------------CHHHHHHHHHH----HTTCCCC
T ss_pred             HHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccccCC----------------cHHHHHHHHhc----CCCCCCC
Confidence            999999999999999999999999999999999986543221                12222222211    2567999


Q ss_pred             CCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          265 LRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       265 ~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      .+|||||+.++||+|++++|+|||+|.+|||+++
T Consensus       220 g~pediA~~v~fLaSd~a~~iTG~~i~VDGG~t~  253 (254)
T 4fn4_A          220 AEPEDIANVIVFLASDEASFVNGDAVVVDGGLTV  253 (254)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             cCHHHHHHHHHHHhCchhcCCcCCEEEeCCCccc
Confidence            9999999999999999999999999999999986

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=100.00  E-value=8.5e-56  Score=384.34  Aligned_cols=246  Identities=30%  Similarity=0.375  Sum_probs=220.0

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      .+|+||++|||||++|||+++|+.|+++|++|++++|+++..+...+.+  .+.++..+.+|++|+++++++++++.+++
T Consensus         5 f~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   84 (255)
T 4g81_D            5 FDLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEG   84 (255)
T ss_dssp             TCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTT
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHC
Confidence            4789999999999999999999999999999999999887766655444  35679999999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC-CCCEEEEecccccccCCCCCccch
Q 021960          105 GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINR-GGGCIISTASVAGVMGGLGPHAYT  183 (305)
Q Consensus       105 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~isS~~~~~~~~~~~~Y~  183 (305)
                      |+||+||||||....    .++.+++.++|++.+++|+.++|+++|+++|.|.++ ++|+||++||.++..+.++...|+
T Consensus        85 G~iDiLVNNAG~~~~----~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~~~~~~Y~  160 (255)
T 4g81_D           85 IHVDILINNAGIQYR----KPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARPTVAPYT  160 (255)
T ss_dssp             CCCCEEEECCCCCCC----CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBCTTCHHHH
T ss_pred             CCCcEEEECCCCCCC----CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCCCCchhHH
Confidence            999999999998644    788999999999999999999999999999999764 679999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCC
Q 021960          184 ASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGT  263 (305)
Q Consensus       184 ~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (305)
                      +||+|+.+|+|++|.|++++|||||+|+||+++|+|....+..                 ++..+.+..     ..|.+|
T Consensus       161 asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~-----------------~~~~~~~~~-----~~Pl~R  218 (255)
T 4g81_D          161 AAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALIED-----------------KQFDSWVKS-----STPSQR  218 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHHHTC-----------------HHHHHHHHH-----HSTTCS
T ss_pred             HHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhcccCC-----------------HHHHHHHHh-----CCCCCC
Confidence            9999999999999999999999999999999999997655432                 111122211     378899


Q ss_pred             CCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          264 TLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       264 ~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      +++|||||+.++||+|++++|+|||+|.+|||++.
T Consensus       219 ~g~pediA~~v~fL~S~~a~~iTG~~i~VDGG~~A  253 (255)
T 4g81_D          219 WGRPEELIGTAIFLSSKASDYINGQIIYVDGGWLA  253 (255)
T ss_dssp             CBCGGGGHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CcCHHHHHHHHHHHhCchhCCCcCCEEEECCCeEe
Confidence            99999999999999999999999999999999875

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=100.00  E-value=1.3e-54  Score=380.20  Aligned_cols=250  Identities=29%  Similarity=0.444  Sum_probs=213.1

Q ss_pred             CCCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           25 SHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        25 ~~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      |..+|+||++|||||++|||+++|+.|+++|++|++++|+++..+...+++ +.++..+.+|++|.++++++++++.+++
T Consensus        23 Ms~rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~-g~~~~~~~~Dv~~~~~v~~~~~~~~~~~  101 (273)
T 4fgs_A           23 MTQRLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI-GGGAVGIQADSANLAELDRLYEKVKAEA  101 (273)
T ss_dssp             --CTTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-CTTCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             hcchhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-CCCeEEEEecCCCHHHHHHHHHHHHHHc
Confidence            444689999999999999999999999999999999999988777766666 4458889999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchh
Q 021960          105 GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTA  184 (305)
Q Consensus       105 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~  184 (305)
                      |+||+||||||....    .++.+++.++|++.+++|+.++++++|+++|.|.+  .|+||++||.++..+.++...|++
T Consensus       102 G~iDiLVNNAG~~~~----~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~--~G~IInisS~~~~~~~~~~~~Y~a  175 (273)
T 4fgs_A          102 GRIDVLFVNAGGGSM----LPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLAR--GSSVVLTGSTAGSTGTPAFSVYAA  175 (273)
T ss_dssp             SCEEEEEECCCCCCC----CCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE--EEEEEEECCGGGGSCCTTCHHHHH
T ss_pred             CCCCEEEECCCCCCC----CChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhh--CCeEEEEeehhhccCCCCchHHHH
Confidence            999999999998643    68899999999999999999999999999999954  589999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCC
Q 021960          185 SKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT  264 (305)
Q Consensus       185 sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (305)
                      +|+|+.+|+|++|.|++++|||||+|+||+++|++..+.....               ..+.-+....+..  ..|.+|+
T Consensus       176 sKaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~---------------~~~~~~~~~~~~~--~~PlgR~  238 (273)
T 4fgs_A          176 SKAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAGKD---------------PVQQQGLLNALAA--QVPMGRV  238 (273)
T ss_dssp             HHHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC---------C---------------HHHHHHHHHHHHH--HSTTSSC
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhhccC---------------chhhHHHHHHHHh--cCCCCCC
Confidence            9999999999999999999999999999999999866543220               0011111122222  3789999


Q ss_pred             CCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          265 LRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       265 ~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      .+|||||+.++||+|++++|+|||+|.+|||++.
T Consensus       239 g~peeiA~~v~FLaSd~a~~iTG~~i~VDGG~s~  272 (273)
T 4fgs_A          239 GRAEEVAAAALFLASDDSSFVTGAELFVDGGSAQ  272 (273)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTT
T ss_pred             cCHHHHHHHHHHHhCchhcCccCCeEeECcChhh
Confidence            9999999999999999999999999999999875

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=100.00  E-value=1.2e-53  Score=372.21  Aligned_cols=250  Identities=28%  Similarity=0.351  Sum_probs=210.3

Q ss_pred             CCCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc-CCCCeEEEEecCCCHHHHHHHHHHHHHh
Q 021960           25 SHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL-APAPVTFVHCDVSLEEDIENLINSTVSR  103 (305)
Q Consensus        25 ~~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~-~~~~v~~~~~D~~d~~~i~~~~~~~~~~  103 (305)
                      |.++|+||++|||||++|||+++|+.|+++|++|++++|+++..+...+.. .+.++.++.+|++|+++++++++++.++
T Consensus         1 M~~~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~   80 (258)
T 4gkb_A            1 MDLNLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIAT   80 (258)
T ss_dssp             CCCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHH
Confidence            346789999999999999999999999999999999999877654433222 3456889999999999999999999999


Q ss_pred             cCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccch
Q 021960          104 YGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYT  183 (305)
Q Consensus       104 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~  183 (305)
                      +|+||+||||||...     ....+.+.++|++.+++|+.++++++|+++|.|+++ +|+||++||.++..+.++...|+
T Consensus        81 ~G~iDiLVNnAGi~~-----~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~-~G~IVnisS~~~~~~~~~~~~Y~  154 (258)
T 4gkb_A           81 FGRLDGLVNNAGVND-----GIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKAT-RGAIVNISSKTAVTGQGNTSGYC  154 (258)
T ss_dssp             HSCCCEEEECCCCCC-----CCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCTHHHHCCSSCHHHH
T ss_pred             hCCCCEEEECCCCCC-----CCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCeEEEEeehhhccCCCCchHHH
Confidence            999999999999753     234478999999999999999999999999999654 59999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCC-
Q 021960          184 ASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKG-  262 (305)
Q Consensus       184 ~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  262 (305)
                      +||+|+.+|+|++|.|++++|||||+|+||+|+|+|..+........             ++   ....+..  ..|.+ 
T Consensus       155 asKaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~-------------~~---~~~~~~~--~~plg~  216 (258)
T 4gkb_A          155 ASKGAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNWIATFEDP-------------EA---KLAEIAA--KVPLGR  216 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC------------------------C---HHHHHHT--TCTTTT
T ss_pred             HHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhhhhcccCh-------------HH---HHHHHHh--cCCCCC
Confidence            99999999999999999999999999999999999976544321111             01   1112222  25664 


Q ss_pred             CCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          263 TTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       263 ~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      |+.+|||||+.++||+|++++|+|||+|.+|||+++
T Consensus       217 R~g~peeiA~~v~fLaS~~a~~iTG~~i~VDGG~T~  252 (258)
T 4gkb_A          217 RFTTPDEIADTAVFLLSPRASHTTGEWLFVDGGYTH  252 (258)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTT
T ss_pred             CCcCHHHHHHHHHHHhCchhcCccCCeEEECCCcch
Confidence            899999999999999999999999999999999975

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=100.00  E-value=3.6e-54  Score=370.94  Aligned_cols=241  Identities=30%  Similarity=0.404  Sum_probs=208.4

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCC
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGR  106 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~  106 (305)
                      .+|+||++|||||++|||+++|+.|+++|++|++++|+............+.++..+.+|++|+++++++++     +++
T Consensus         5 f~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~-----~g~   79 (247)
T 4hp8_A            5 FSLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIAKDGGNASALLIDFADPLAAKDSFT-----DAG   79 (247)
T ss_dssp             TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTSTTTTTTSST-----TTC
T ss_pred             cCCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHH-----hCC
Confidence            478999999999999999999999999999999999986432111111245678999999999988887663     478


Q ss_pred             ccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-CCEEEEecccccccCCCCCccchhh
Q 021960          107 LDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRG-GGCIISTASVAGVMGGLGPHAYTAS  185 (305)
Q Consensus       107 id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~~s  185 (305)
                      ||+||||||....    .++.+++.++|++.+++|+.++|+++|+++|.|.+++ .|+||++||..+..+.++...|++|
T Consensus        80 iDiLVNNAGi~~~----~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~~~~~~Y~as  155 (247)
T 4hp8_A           80 FDILVNNAGIIRR----ADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGGIRVPSYTAA  155 (247)
T ss_dssp             CCEEEECCCCCCC----CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCSSCHHHHHH
T ss_pred             CCEEEECCCCCCC----CCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCCCCChHHHHH
Confidence            9999999998654    6888999999999999999999999999999998775 6999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCC
Q 021960          186 KHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL  265 (305)
Q Consensus       186 Kaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (305)
                      |+++.+|+|++|.|++++|||||+|+||+|+|+|....+..                 ++..+.+   ..  ..|.+|+.
T Consensus       156 Kaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~~~~~~-----------------~~~~~~~---~~--~~PlgR~g  213 (247)
T 4hp8_A          156 KHGVAGLTKLLANEWAAKGINVNAIAPGYIETNNTEALRAD-----------------AARNKAI---LE--RIPAGRWG  213 (247)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTS-----------------HHHHHHH---HT--TCTTSSCB
T ss_pred             HHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchhhcccC-----------------HHHHHHH---Hh--CCCCCCCc
Confidence            99999999999999999999999999999999997654332                 1111111   22  37899999


Q ss_pred             CHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          266 RSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       266 ~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      +|||||+.++||+|++++|+|||+|.+|||++.
T Consensus       214 ~peeiA~~v~fLaSd~a~~iTG~~i~VDGG~~A  246 (247)
T 4hp8_A          214 HSEDIAGAAVFLSSAAADYVHGAILNVDGGWLA  246 (247)
T ss_dssp             CTHHHHHHHHHHTSGGGTTCCSCEEEESTTGGG
T ss_pred             CHHHHHHHHHHHhCchhcCCcCCeEEECccccc
Confidence            999999999999999999999999999999874

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=100.00  E-value=1e-53  Score=367.38  Aligned_cols=234  Identities=30%  Similarity=0.445  Sum_probs=202.0

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRL  107 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~i  107 (305)
                      .++||++|||||++|||+++|+.|+++|++|++++|+.+..+.    ..+.++..+.+|++|+++++++++    ++|+|
T Consensus         8 lf~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~----~~~~~~~~~~~Dv~~~~~v~~~~~----~~g~i   79 (242)
T 4b79_A            8 IYAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHA----PRHPRIRREELDITDSQRLQRLFE----ALPRL   79 (242)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTS----CCCTTEEEEECCTTCHHHHHHHHH----HCSCC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhh----hhcCCeEEEEecCCCHHHHHHHHH----hcCCC
Confidence            3589999999999999999999999999999999998765432    234568999999999999887764    57999


Q ss_pred             cEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhHH
Q 021960          108 DILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKH  187 (305)
Q Consensus       108 d~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKa  187 (305)
                      |+||||||..      .++.+++.++|++.+++|+.++++++|+++|+|+++ +|+||++||..+..+.++...|++||+
T Consensus        80 DiLVNNAGi~------~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~-~G~IVnisS~~~~~~~~~~~~Y~asKa  152 (242)
T 4b79_A           80 DVLVNNAGIS------RDREEYDLATFERVLRLNLSAAMLASQLARPLLAQR-GGSILNIASMYSTFGSADRPAYSASKG  152 (242)
T ss_dssp             SEEEECCCCC------CGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-CEEEEEECCGGGTSCCSSCHHHHHHHH
T ss_pred             CEEEECCCCC------CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCeEEEEeeccccCCCCCCHHHHHHHH
Confidence            9999999975      456788999999999999999999999999998765 599999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCCH
Q 021960          188 AIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRS  267 (305)
Q Consensus       188 a~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (305)
                      ++.+|+|+||.|++++|||||+|+||+++|+|....+..                 ++..+.+..     ..|.+|+.+|
T Consensus       153 av~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~~~-----------------~~~~~~~~~-----~~PlgR~g~p  210 (242)
T 4b79_A          153 AIVQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLKAD-----------------VEATRRIMQ-----RTPLARWGEA  210 (242)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCCC-----CCC-----------------HHHHHHHHH-----TCTTCSCBCH
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEEeCCCCChhhhcccCC-----------------HHHHHHHHh-----cCCCCCCcCH
Confidence            999999999999999999999999999999996544322                 122222222     3789999999


Q ss_pred             HHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          268 KDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       268 ~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      ||||+.++||+|++++|+|||+|.+|||+..
T Consensus       211 eeiA~~v~fLaSd~a~~iTG~~l~VDGG~la  241 (242)
T 4b79_A          211 PEVASAAAFLCGPGASFVTGAVLAVDGGYLC  241 (242)
T ss_dssp             HHHHHHHHHHTSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHHHHHhCchhcCccCceEEECccHhh
Confidence            9999999999999999999999999999864

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=100.00  E-value=7.2e-53  Score=368.25  Aligned_cols=252  Identities=24%  Similarity=0.343  Sum_probs=213.8

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCC
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGR  106 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~  106 (305)
                      ++|+||++|||||++|||+++|+.|+++|++|++++|++...        ..+..++.+|++|.++++++++++.+++|+
T Consensus         7 ~~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~--------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~   78 (261)
T 4h15_A            7 LNLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEG--------LPEELFVEADLTTKEGCAIVAEATRQRLGG   78 (261)
T ss_dssp             CCCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTT--------SCTTTEEECCTTSHHHHHHHHHHHHHHTSS
T ss_pred             cCCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhC--------CCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            478999999999999999999999999999999999975421        112346889999999999999999999999


Q ss_pred             ccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCC-CCccchhh
Q 021960          107 LDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGL-GPHAYTAS  185 (305)
Q Consensus       107 id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~-~~~~Y~~s  185 (305)
                      ||+||||||.....  ..++.+++.++|++.+++|+.++++++|+++|.|++++.|+||++||..+..+.+ +...|++|
T Consensus        79 iDilVnnAG~~~~~--~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~~~~~~~~~Y~as  156 (261)
T 4h15_A           79 VDVIVHMLGGSSAA--GGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVLPLPESTTAYAAA  156 (261)
T ss_dssp             CSEEEECCCCCCCC--SSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTTCHHHHHH
T ss_pred             CCEEEECCCCCccC--CCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhccCCCCccHHHHHH
Confidence            99999999975432  2578899999999999999999999999999999999999999999999999876 57889999


Q ss_pred             HHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCC
Q 021960          186 KHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL  265 (305)
Q Consensus       186 Kaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (305)
                      |+|+.+|+|+||.|++++|||||+|+||+++|+|....+..        .....+...+...+...+...  ..|.+|+.
T Consensus       157 Kaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~--~~PlgR~g  226 (261)
T 4h15_A          157 KAALSTYSKAMSKEVSPKGVRVVRVSPGWIETEASVRLAER--------LAKQAGTDLEGGKKIIMDGLG--GIPLGRPA  226 (261)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHH--------HHHHTTCCHHHHHHHHHHHTT--CCTTSSCB
T ss_pred             HHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcchhhhhHH--------HHHhhccchhhHHHHHHHHhc--CCCCCCCc
Confidence            99999999999999999999999999999999997654322        111122222222222333322  47899999


Q ss_pred             CHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          266 RSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       266 ~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      +|||||+.++||+|++++|+|||+|.+|||+..
T Consensus       227 ~peevA~~v~fLaS~~a~~itG~~i~VDGG~v~  259 (261)
T 4h15_A          227 KPEEVANLIAFLASDRAASITGAEYTIDGGTVP  259 (261)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTCSC
T ss_pred             CHHHHHHHHHHHhCchhcCccCcEEEECCcCcc
Confidence            999999999999999999999999999999743

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=100.00  E-value=3.3e-52  Score=364.20  Aligned_cols=250  Identities=21%  Similarity=0.260  Sum_probs=217.1

Q ss_pred             CCCCCCEEEEecCCC--chHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc---CCCCeEEEEecCCCHHHHHHHHHHHH
Q 021960           27 RRLEGKVAIITGGAR--GIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL---APAPVTFVHCDVSLEEDIENLINSTV  101 (305)
Q Consensus        27 ~~l~~k~vlVtGas~--giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~---~~~~v~~~~~D~~d~~~i~~~~~~~~  101 (305)
                      ++|+||++|||||+|  |||+++|+.|+++|++|++++|++...+.+.+.+   .+.++.++.+|++|.++++++++++.
T Consensus         2 ~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   81 (256)
T 4fs3_A            2 LNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIG   81 (256)
T ss_dssp             CCCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHH
Confidence            478999999999875  9999999999999999999999887666554443   45578999999999999999999999


Q ss_pred             HhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCcc
Q 021960          102 SRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHA  181 (305)
Q Consensus       102 ~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~  181 (305)
                      +++|++|+||||||..........+.+.++++|...+++|+.+++.+.+.+.+.+  +++|+||++||.++..+.++...
T Consensus        82 ~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~--~~~G~IVnisS~~~~~~~~~~~~  159 (256)
T 4fs3_A           82 KDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLM--PEGGSIVATTYLGGEFAVQNYNV  159 (256)
T ss_dssp             HHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTC--TTCEEEEEEECGGGTSCCTTTHH
T ss_pred             HHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHh--ccCCEEEEEeccccccCcccchh
Confidence            9999999999999986554344567788999999999999999999999988766  45699999999999999999999


Q ss_pred             chhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCC
Q 021960          182 YTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLK  261 (305)
Q Consensus       182 Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (305)
                      |++||+|+.+|+|+||.|++++|||||+|+||+++|+|.......                 ++..+.+..     ..|.
T Consensus       160 Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~-----------------~~~~~~~~~-----~~Pl  217 (256)
T 4fs3_A          160 MGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGGF-----------------NTILKEIKE-----RAPL  217 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTH-----------------HHHHHHHHH-----HSTT
T ss_pred             hHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhccCC-----------------HHHHHHHHh-----cCCC
Confidence            999999999999999999999999999999999999986543211                 222222222     2688


Q ss_pred             CCCCCHHHHHHHHHHhccCCCCceeccEEEecCCccccc
Q 021960          262 GTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTSR  300 (305)
Q Consensus       262 ~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~~  300 (305)
                      +|+++|||||+.++||+|++++|+|||+|.+|||++..+
T Consensus       218 ~R~g~peevA~~v~fL~Sd~a~~iTG~~i~VDGG~~avr  256 (256)
T 4fs3_A          218 KRNVDQVEVGKTAAYLLSDLSSGVTGENIHVDSGFHAIK  256 (256)
T ss_dssp             SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCC
T ss_pred             CCCcCHHHHHHHHHHHhCchhcCccCCEEEECcCHHhcC
Confidence            999999999999999999999999999999999998753

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=100.00  E-value=7.2e-52  Score=358.04  Aligned_cols=232  Identities=25%  Similarity=0.393  Sum_probs=206.3

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEE
Q 021960           31 GKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDIL  110 (305)
Q Consensus        31 ~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~l  110 (305)
                      +|+||||||++|||+++|+.|+++|++|++++|+++..+.+.+.  ..++.++.+|++|+++++++++++.+++|+||+|
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDiL   79 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKE--RPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVL   79 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTT--CTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh--cCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            58999999999999999999999999999999998776665544  3468899999999999999999999999999999


Q ss_pred             EEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhHHHHH
Q 021960          111 YNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIV  190 (305)
Q Consensus       111 i~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKaa~~  190 (305)
                      |||||....    .++.+++.++|++.+++|+.++++++|.+.|.|.++ +|+||++||..+..+.++...|++||+|+.
T Consensus        80 VNNAG~~~~----~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~-~G~IInisS~~~~~~~~~~~~Y~asKaal~  154 (247)
T 3ged_A           80 VNNACRGSK----GILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKN-KGRIINIASTRAFQSEPDSEAYASAKGGIV  154 (247)
T ss_dssp             EECCCCCCC----CGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEECCGGGTSCCTTCHHHHHHHHHHH
T ss_pred             EECCCCCCC----CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc-CCcEEEEeecccccCCCCCHHHHHHHHHHH
Confidence            999998644    688999999999999999999999999999999875 499999999999999999999999999999


Q ss_pred             HHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCCHHHH
Q 021960          191 GLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSKDI  270 (305)
Q Consensus       191 ~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv  270 (305)
                      +|+|++|.|+++ |||||+|+||+++|++..+...                   +    .   ..  ..|.+|+.+||||
T Consensus       155 ~ltk~lA~ela~-~IrVN~I~PG~i~t~~~~~~~~-------------------~----~---~~--~~Pl~R~g~pedi  205 (247)
T 3ged_A          155 ALTHALAMSLGP-DVLVNCIAPGWINVTEQQEFTQ-------------------E----D---CA--AIPAGKVGTPKDI  205 (247)
T ss_dssp             HHHHHHHHHHTT-TSEEEEEEECSBCCCC---CCH-------------------H----H---HH--TSTTSSCBCHHHH
T ss_pred             HHHHHHHHHHCC-CCEEEEEecCcCCCCCcHHHHH-------------------H----H---Hh--cCCCCCCcCHHHH
Confidence            999999999997 9999999999999998543211                   1    1   11  3688999999999


Q ss_pred             HHHHHHhccCCCCceeccEEEecCCccccc
Q 021960          271 AEAALYLASDESRYVSGHNLVVDGGVTTSR  300 (305)
Q Consensus       271 a~~v~~l~s~~~~~~tG~~i~idgG~~~~~  300 (305)
                      |+.++||+|+  +|+|||+|.+|||++..-
T Consensus       206 A~~v~fL~s~--~~iTG~~i~VDGG~s~r~  233 (247)
T 3ged_A          206 SNMVLFLCQQ--DFITGETIIVDGGMSKRM  233 (247)
T ss_dssp             HHHHHHHHHC--SSCCSCEEEESTTGGGCC
T ss_pred             HHHHHHHHhC--CCCCCCeEEECcCHHHhC
Confidence            9999999984  699999999999998644

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=100.00  E-value=5.7e-48  Score=337.36  Aligned_cols=246  Identities=33%  Similarity=0.486  Sum_probs=216.4

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHh
Q 021960           26 HRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSR  103 (305)
Q Consensus        26 ~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~  103 (305)
                      ..++++|++|||||++|||+++|+.|+++|++|++++|+....+...+.+  .+.++.++.+|++|.++++++++++.+.
T Consensus         7 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~   86 (256)
T 3gaf_A            7 PFHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQ   86 (256)
T ss_dssp             TTCCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            35688999999999999999999999999999999999877665554433  3567999999999999999999999999


Q ss_pred             cCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccch
Q 021960          104 YGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYT  183 (305)
Q Consensus       104 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~  183 (305)
                      ++++|+||||||....    .++ +.+.++|++.+++|+.+++++++.++|.|.+++.|+||++||..+..+.++...|+
T Consensus        87 ~g~id~lv~nAg~~~~----~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  161 (256)
T 3gaf_A           87 FGKITVLVNNAGGGGP----KPF-DMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTNVRMASYG  161 (256)
T ss_dssp             HSCCCEEEECCCCCCC----CCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTCCCTTCHHHH
T ss_pred             cCCCCEEEECCCCCCC----CCC-CCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcCCCCCchHHH
Confidence            9999999999998654    445 78999999999999999999999999999998889999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCC
Q 021960          184 ASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGT  263 (305)
Q Consensus       184 ~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (305)
                      ++|+++++|+++++.|++++||+||+|+||+++|++......                  .+..+.+.   .  ..|.++
T Consensus       162 asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~------------------~~~~~~~~---~--~~p~~r  218 (256)
T 3gaf_A          162 SSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATVLT------------------PEIERAML---K--HTPLGR  218 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHCC------------------HHHHHHHH---T--TCTTSS
T ss_pred             HHHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhhccC------------------HHHHHHHH---h--cCCCCC
Confidence            999999999999999999999999999999999998654321                  11111111   1  367889


Q ss_pred             CCCHHHHHHHHHHhccCCCCceeccEEEecCCcccc
Q 021960          264 TLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTS  299 (305)
Q Consensus       264 ~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~  299 (305)
                      +.+|+|+|+.++||+++.++++||++|.+|||....
T Consensus       219 ~~~~~dva~~~~~L~s~~~~~itG~~i~vdgG~~~~  254 (256)
T 3gaf_A          219 LGEAQDIANAALFLCSPAAAWISGQVLTVSGGGVQE  254 (256)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSCCC
T ss_pred             CCCHHHHHHHHHHHcCCcccCccCCEEEECCCcccc
Confidence            999999999999999999999999999999998754

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=5.7e-48  Score=338.48  Aligned_cols=250  Identities=29%  Similarity=0.458  Sum_probs=218.7

Q ss_pred             CCCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc---CCCCeEEEEecCCCHHHHHHHHHHHH
Q 021960           25 SHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL---APAPVTFVHCDVSLEEDIENLINSTV  101 (305)
Q Consensus        25 ~~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~---~~~~v~~~~~D~~d~~~i~~~~~~~~  101 (305)
                      ...++++|++|||||++|||+++|+.|+++|++|++++|+....+...+.+   ...++.++.+|++|.++++++++++.
T Consensus         4 ~m~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   83 (262)
T 3pk0_A            4 SMFDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAV   83 (262)
T ss_dssp             CTTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence            445789999999999999999999999999999999999877665544433   22579999999999999999999999


Q ss_pred             HhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccc-cCCCCCc
Q 021960          102 SRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGV-MGGLGPH  180 (305)
Q Consensus       102 ~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~-~~~~~~~  180 (305)
                      ++++++|+||||||....    .++.+.+.++|++.+++|+.+++++++.++|.|.+++.++||++||..+. .+.++..
T Consensus        84 ~~~g~id~lvnnAg~~~~----~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~  159 (262)
T 3pk0_A           84 EEFGGIDVVCANAGVFPD----APLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPITGYPGWS  159 (262)
T ss_dssp             HHHSCCSEEEECCCCCCC----CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTTBCCTTCH
T ss_pred             HHhCCCCEEEECCCCCCC----CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCCCh
Confidence            999999999999998644    57788999999999999999999999999999998888999999999986 7888999


Q ss_pred             cchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCC
Q 021960          181 AYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNL  260 (305)
Q Consensus       181 ~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (305)
                      .|++||+++++|+++++.|++++||+||+|+||+++|++.....                   ++..+.+   ..  ..+
T Consensus       160 ~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~-------------------~~~~~~~---~~--~~p  215 (262)
T 3pk0_A          160 HYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLENG-------------------EEYIASM---AR--SIP  215 (262)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHTTC-------------------HHHHHHH---HT--TST
T ss_pred             hhHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCccccccC-------------------HHHHHHH---Hh--cCC
Confidence            99999999999999999999999999999999999999854310                   1111111   11  367


Q ss_pred             CCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCccccccc
Q 021960          261 KGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTSRNC  302 (305)
Q Consensus       261 ~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~~~~  302 (305)
                      .+++.+|+|+|+.++||++++++++||++|.+|||+++..++
T Consensus       216 ~~r~~~p~dva~~v~~L~s~~~~~itG~~i~vdGG~~~~~~~  257 (262)
T 3pk0_A          216 AGALGTPEDIGHLAAFLATKEAGYITGQAIAVDGGQVLPESL  257 (262)
T ss_dssp             TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTCCSSG
T ss_pred             CCCCcCHHHHHHHHHHHhCccccCCcCCEEEECCCeecCcch
Confidence            889999999999999999999999999999999999876554

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=100.00  E-value=1.1e-47  Score=343.01  Aligned_cols=280  Identities=29%  Similarity=0.411  Sum_probs=211.8

Q ss_pred             CCCCcCcceeeeccCCCCC--CCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCc------------chhhhHh
Q 021960            7 PETNLQGIHVLAWDDAPPS--HRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVED------------TLGSVLA   72 (305)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~--~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~------------~~~~~~~   72 (305)
                      .-+|--++|..+|....|.  ..+++||++|||||++|||+++|+.|+++|++|++++|+.            ...+...
T Consensus         2 ~~~~~~~~~~~~~~~~~p~~m~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (299)
T 3t7c_A            2 AHHHHHHMGTLEAQTQGPGSMAGKVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETV   81 (299)
T ss_dssp             --------------------CCCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHH
T ss_pred             CccccccccceeccCCCCcccccccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHH
Confidence            4466677888887766553  4578999999999999999999999999999999998862            2222222


Q ss_pred             hhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHH
Q 021960           73 STL--APAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIK  150 (305)
Q Consensus        73 ~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  150 (305)
                      +.+  .+.++.++.+|++|.++++++++++.+.+|++|+||||||.....   .++.+.+.++|++.+++|+.+++++++
T Consensus        82 ~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~---~~~~~~~~~~~~~~~~vN~~g~~~l~~  158 (299)
T 3t7c_A           82 RQVEALGRRIIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEG---TRLNRMDPKTWRDMIDVNLNGAWITAR  158 (299)
T ss_dssp             HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCC---CCTTTCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCC---CchhhCCHHHHHHHHHHhhHHHHHHHH
Confidence            222  356799999999999999999999999999999999999986542   347788999999999999999999999


Q ss_pred             HHHHHHHcCC-CCEEEEecccccccCCCCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCC
Q 021960          151 HAARVMINRG-GGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGD  229 (305)
Q Consensus       151 ~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~  229 (305)
                      .++|.|.+++ .|+||++||.++..+.++...|++||+++++|+++++.|++++||+||+|+||+++|+|.......   
T Consensus       159 ~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~---  235 (299)
T 3t7c_A          159 VAIPHIMAGKRGGSIVFTSSIGGLRGAENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTY---  235 (299)
T ss_dssp             HHHHHHHHTTSCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHH---
T ss_pred             HHHHHHHhcCCCcEEEEECChhhccCCCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccccchh---
Confidence            9999987765 789999999999999999999999999999999999999999999999999999999986431100   


Q ss_pred             CchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          230 GEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                         .........+..+..........  ..+ +++.+|+|+|+.++||+|++++|+||++|.+|||+++
T Consensus       236 ---~~~~~~~~~~~~~~~~~~~~~~~--~~p-~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~~l  298 (299)
T 3t7c_A          236 ---RMFRPDLENPTVEDFQVASRQMH--VLP-IPYVEPADISNAILFLVSDDARYITGVSLPVDGGALL  298 (299)
T ss_dssp             ---HHHCTTSSSCCHHHHHHHHHHHS--SSS-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             ---hhhhhhhccchhhHHHHHhhhhc--ccC-cCCCCHHHHHHHHHHHhCcccccCcCCEEeeCCCccc
Confidence               00000000111122211111221  234 7888999999999999999999999999999999875

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=100.00  E-value=1e-47  Score=337.38  Aligned_cols=256  Identities=21%  Similarity=0.253  Sum_probs=218.1

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc----CCCCeEEEEecCCCHHHHHHHHHHHHH
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL----APAPVTFVHCDVSLEEDIENLINSTVS  102 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~----~~~~v~~~~~D~~d~~~i~~~~~~~~~  102 (305)
                      .++++|++|||||++|||+++|+.|+++|++|++++|+....+...+.+    .+.++.++.+|++|.++++++++++.+
T Consensus         4 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   83 (265)
T 3lf2_A            4 YDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACER   83 (265)
T ss_dssp             CCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence            4688999999999999999999999999999999999877655544432    344589999999999999999999999


Q ss_pred             hcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccc
Q 021960          103 RYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAY  182 (305)
Q Consensus       103 ~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y  182 (305)
                      .++++|+||||||....    .++.+.+.++|++.+++|+.+++++++.++|.|.+++.++||++||..+..+.++...|
T Consensus        84 ~~g~id~lvnnAg~~~~----~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  159 (265)
T 3lf2_A           84 TLGCASILVNNAGQGRV----STFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPEPHMVAT  159 (265)
T ss_dssp             HHCSCSEEEECCCCCCC----BCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSCCTTBHHH
T ss_pred             HcCCCCEEEECCCCCCC----CCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCCCCCCchhh
Confidence            99999999999998643    67788999999999999999999999999999998888999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCC
Q 021960          183 TASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKG  262 (305)
Q Consensus       183 ~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (305)
                      +++|+++++|+++++.|++++||+||+|+||+++|++...........         .... +.....  .......|.+
T Consensus       160 ~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~---------~~~~-~~~~~~--~~~~~~~p~~  227 (265)
T 3lf2_A          160 SAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREER---------ELDW-AQWTAQ--LARNKQIPLG  227 (265)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC---------------CH-HHHHHH--HHHHTTCTTC
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhhhhhhh---------ccCH-HHHHHH--HhhccCCCcC
Confidence            999999999999999999999999999999999999976554321100         0011 111111  1111136789


Q ss_pred             CCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          263 TTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       263 ~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      ++.+|+|+|+.++||+|+.++|+||++|.+|||++.
T Consensus       228 r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~~~  263 (265)
T 3lf2_A          228 RLGKPIEAARAILFLASPLSAYTTGSHIDVSGGLSR  263 (265)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSEEEEESSSCCC
T ss_pred             CCcCHHHHHHHHHHHhCchhcCcCCCEEEECCCCcC
Confidence            999999999999999999999999999999999875

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=100.00  E-value=3.8e-48  Score=342.29  Aligned_cols=251  Identities=26%  Similarity=0.314  Sum_probs=217.5

Q ss_pred             CCCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc---CCCCeEEEEecCCCHHHHHHHHHHHH
Q 021960           25 SHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL---APAPVTFVHCDVSLEEDIENLINSTV  101 (305)
Q Consensus        25 ~~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~---~~~~v~~~~~D~~d~~~i~~~~~~~~  101 (305)
                      ....++||++|||||++|||+++|+.|+++|++|++++|+....+...+.+   .+.++.++.+|++|.++++++++++.
T Consensus        21 ~~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~  100 (277)
T 4fc7_A           21 CPDLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQAL  100 (277)
T ss_dssp             CTTTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence            344689999999999999999999999999999999999876655443333   24579999999999999999999999


Q ss_pred             HhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCcc
Q 021960          102 SRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHA  181 (305)
Q Consensus       102 ~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~  181 (305)
                      +.+|++|+||||||....    .++.+.+.++|++.+++|+.+++++++.+++.|.+++.++||++||..+..+.++...
T Consensus       101 ~~~g~id~lv~nAg~~~~----~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  176 (277)
T 4fc7_A          101 KEFGRIDILINCAAGNFL----CPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQALQVH  176 (277)
T ss_dssp             HHHSCCCEEEECCCCCCC----CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHHTCTTCHH
T ss_pred             HHcCCCCEEEECCcCCCC----CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCCcHH
Confidence            999999999999997543    5778899999999999999999999999999998888899999999999999999999


Q ss_pred             chhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCC
Q 021960          182 YTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLK  261 (305)
Q Consensus       182 Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (305)
                      |++||+++++|+++++.|++++||+||+|+||+++|++....+..               + .+..+...   .  ..|.
T Consensus       177 Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~---------------~-~~~~~~~~---~--~~p~  235 (277)
T 4fc7_A          177 AGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLGG---------------P-QASLSTKV---T--ASPL  235 (277)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHHHHSC---------------C-HHHHHHHH---H--TSTT
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecchhhhhccC---------------C-HHHHHHHh---c--cCCC
Confidence            999999999999999999999999999999999999874433211               0 11111111   1  3678


Q ss_pred             CCCCCHHHHHHHHHHhccCCCCceeccEEEecCCccccc
Q 021960          262 GTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTSR  300 (305)
Q Consensus       262 ~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~~  300 (305)
                      +++.+|+|+|+.++||+|+.++++||++|.+|||..+..
T Consensus       236 ~r~~~p~dvA~~v~fL~s~~~~~itG~~i~vdGG~~~~~  274 (277)
T 4fc7_A          236 QRLGNKTEIAHSVLYLASPLASYVTGAVLVADGGAWLTF  274 (277)
T ss_dssp             SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTHHHHC
T ss_pred             CCCcCHHHHHHHHHHHcCCccCCcCCCEEEECCCcccCC
Confidence            999999999999999999999999999999999987654

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=100.00  E-value=1.3e-47  Score=338.80  Aligned_cols=254  Identities=35%  Similarity=0.531  Sum_probs=220.8

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcC
Q 021960           26 HRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYG  105 (305)
Q Consensus        26 ~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g  105 (305)
                      .+++++|++|||||++|||+++|+.|+++|++|++++|+....+...+.. +.++.++.+|++|.++++++++++.+.+|
T Consensus        22 ~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  100 (277)
T 4dqx_A           22 SMDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEI-GSKAFGVRVDVSSAKDAESMVEKTTAKWG  100 (277)
T ss_dssp             CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH-CTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-CCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            35678999999999999999999999999999999999887766655554 45689999999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhh
Q 021960          106 RLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTAS  185 (305)
Q Consensus       106 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  185 (305)
                      ++|+||||||....    .++.+.+.++|++.+++|+.++++++++++|.|.+++.|+||++||..+..+.++...|++|
T Consensus       101 ~iD~lv~nAg~~~~----~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  176 (277)
T 4dqx_A          101 RVDVLVNNAGFGTT----GNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSAIADRTAYVAS  176 (277)
T ss_dssp             CCCEEEECCCCCCC----BCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred             CCCEEEECCCcCCC----CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCcCCCCChhHHHH
Confidence            99999999997644    56778899999999999999999999999999988888999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCC
Q 021960          186 KHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL  265 (305)
Q Consensus       186 Kaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (305)
                      |+++++|+++++.|++++||+||+|+||+++|+|....+....                +..+....+..  ..+.+++.
T Consensus       177 Kaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~----------------~~~~~~~~~~~--~~~~~r~~  238 (277)
T 4dqx_A          177 KGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKIFAEAK----------------DPAKLRSDFNA--RAVMDRMG  238 (277)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHHTCS----------------CHHHHHHHHHT--TSTTCSCB
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhhhhccccc----------------chhHHHHHHHh--cCcccCCc
Confidence            9999999999999999999999999999999998554432210                00111111111  36788999


Q ss_pred             CHHHHHHHHHHhccCCCCceeccEEEecCCccccccc
Q 021960          266 RSKDIAEAALYLASDESRYVSGHNLVVDGGVTTSRNC  302 (305)
Q Consensus       266 ~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~~~~  302 (305)
                      +|+|+|+.++||+++.++++||++|.+|||+++....
T Consensus       239 ~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~~~~~  275 (277)
T 4dqx_A          239 TAEEIAEAMLFLASDRSRFATGSILTVDGGSSIGNHL  275 (277)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESSSSSSCCTT
T ss_pred             CHHHHHHHHHHHhCCccCCCcCCEEEECCchhhhhcc
Confidence            9999999999999999999999999999999887654

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=1.1e-47  Score=336.98  Aligned_cols=257  Identities=22%  Similarity=0.301  Sum_probs=218.4

Q ss_pred             CCCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHH
Q 021960           25 SHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVS  102 (305)
Q Consensus        25 ~~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~  102 (305)
                      +...+++|++|||||++|||+++|+.|+++|++|++++|+....+.+.+.+  .+.++.++.+|++|.++++++++++.+
T Consensus         5 m~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   84 (264)
T 3ucx_A            5 MGGLLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMK   84 (264)
T ss_dssp             --CTTTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCcCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            344688999999999999999999999999999999999877665554443  356799999999999999999999999


Q ss_pred             hcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccc
Q 021960          103 RYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAY  182 (305)
Q Consensus       103 ~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y  182 (305)
                      .++++|+||||||.....   .++.+.+.++|++.+++|+.+++++++.++|.|.+++ |+||++||..+..+.++...|
T Consensus        85 ~~g~id~lv~nAg~~~~~---~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y  160 (264)
T 3ucx_A           85 AYGRVDVVINNAFRVPSM---KPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESK-GAVVNVNSMVVRHSQAKYGAY  160 (264)
T ss_dssp             HTSCCSEEEECCCSCCCC---CCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHT-CEEEEECCGGGGCCCTTCHHH
T ss_pred             HcCCCcEEEECCCCCCCC---CCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEECcchhccCCCccHHH
Confidence            999999999999975432   5788899999999999999999999999999998765 999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCC
Q 021960          183 TASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKG  262 (305)
Q Consensus       183 ~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (305)
                      +++|+++++|+++++.|++++||+||+|+||+++|++....+..        .......+.++..+.+.   .  ..+.+
T Consensus       161 ~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~--------~~~~~~~~~~~~~~~~~---~--~~p~~  227 (264)
T 3ucx_A          161 KMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEH--------QAGKYGTSVEDIYNAAA---A--GSDLK  227 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHHHH--------HHHHTTCCHHHHHHHHH---T--TSSSS
T ss_pred             HHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccccHHHHHHh--------hhhhcCCCHHHHHHHHh---c--cCCcc
Confidence            99999999999999999999999999999999999997654321        00111112222222222   1  46889


Q ss_pred             CCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          263 TTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       263 ~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      ++.+|+|+|+.++||+|+.++++||++|.+|||..+
T Consensus       228 r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~~  263 (264)
T 3ucx_A          228 RLPTEDEVASAILFMASDLASGITGQALDVNCGEYK  263 (264)
T ss_dssp             SCCBHHHHHHHHHHHHSGGGTTCCSCEEEESTTSSC
T ss_pred             cCCCHHHHHHHHHHHcCccccCCCCCEEEECCCccC
Confidence            999999999999999999999999999999999864

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=100.00  E-value=5.2e-48  Score=340.33  Aligned_cols=260  Identities=25%  Similarity=0.338  Sum_probs=218.7

Q ss_pred             ceeeeccCCCC-CCCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc--CCCCeEEEEecCCCH
Q 021960           14 IHVLAWDDAPP-SHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL--APAPVTFVHCDVSLE   90 (305)
Q Consensus        14 ~~~~~~~~~~~-~~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~--~~~~v~~~~~D~~d~   90 (305)
                      .|..+...... ...+++||++|||||++|||+++|+.|+++|++|++++|+....+...+.+  .+.++.++.+|++|.
T Consensus         8 ~~~~~~~~m~~~~~~~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~   87 (271)
T 4ibo_A            8 SGLVPRGSMSNQIIFDLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSE   87 (271)
T ss_dssp             ----------CCGGGCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCH
T ss_pred             CCCCCcccCccccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCH
Confidence            34444443332 235789999999999999999999999999999999999877665554443  345789999999999


Q ss_pred             HHHHHHHHHHHHhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEeccc
Q 021960           91 EDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASV  170 (305)
Q Consensus        91 ~~i~~~~~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~  170 (305)
                      ++++++++++.+.++++|+||||||....    .++.+.+.++|++.+++|+.+++++++.+++.|.+++.|+||++||.
T Consensus        88 ~~v~~~~~~~~~~~g~iD~lv~nAg~~~~----~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~  163 (271)
T 4ibo_A           88 SEIIEAFARLDEQGIDVDILVNNAGIQFR----KPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSL  163 (271)
T ss_dssp             HHHHHHHHHHHHHTCCCCEEEECCCCCCC----CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCG
T ss_pred             HHHHHHHHHHHHHCCCCCEEEECCCCCCC----CCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccH
Confidence            99999999999999999999999998644    57788999999999999999999999999999998888999999999


Q ss_pred             ccccCCCCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHH
Q 021960          171 AGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKM  250 (305)
Q Consensus       171 ~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (305)
                      .+..+.++...|+++|+++++|+++++.|++++||+||+|+||+++|+|.......                 ++..+.+
T Consensus       164 ~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~-----------------~~~~~~~  226 (271)
T 4ibo_A          164 TSELARATVAPYTVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQALIDN-----------------PEFDAWV  226 (271)
T ss_dssp             GGTSBCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHHC-----------------HHHHHHH
T ss_pred             HhCCCCCCchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhcccC-----------------HHHHHHH
Confidence            99999999999999999999999999999999999999999999999986543221                 1111111


Q ss_pred             HHHHhhcCCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCcccc
Q 021960          251 EEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTS  299 (305)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~  299 (305)
                      .   .  ..|.+++.+|+|+|+.++||+++.++++||++|.+|||++..
T Consensus       227 ~---~--~~p~~r~~~pedva~~v~~L~s~~~~~itG~~i~vdGG~~~~  270 (271)
T 4ibo_A          227 K---A--RTPAKRWGKPQELVGTAVFLSASASDYVNGQIIYVDGGMLSV  270 (271)
T ss_dssp             H---H--HSTTCSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTTGGGB
T ss_pred             H---h--cCCCCCCcCHHHHHHHHHHHhCccccCCCCcEEEECCCeecc
Confidence            1   1  267889999999999999999999999999999999998753

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=100.00  E-value=1.6e-47  Score=334.83  Aligned_cols=247  Identities=25%  Similarity=0.360  Sum_probs=215.2

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEE-ecCcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhcCC
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIA-DVEDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRYGR  106 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~-~r~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~  106 (305)
                      ++|++|||||++|||+++++.|+++|++|+++ +|+....+...+.+  .+.++.++.+|++|.++++++++++.+.+++
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGR   82 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            68999999999999999999999999999986 77766655544433  2457999999999999999999999999999


Q ss_pred             ccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhH
Q 021960          107 LDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASK  186 (305)
Q Consensus       107 id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  186 (305)
                      +|+||||||....    .++.+.+.++|++.+++|+.+++++++.++|.|.+++.++||++||..+..+.++...|++||
T Consensus        83 id~lv~nAg~~~~----~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  158 (258)
T 3oid_A           83 LDVFVNNAASGVL----RPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRYLENYTTVGVSK  158 (258)
T ss_dssp             CCEEEECCCCCCC----SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTSBCTTCHHHHHHH
T ss_pred             CCEEEECCCCCCC----CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCCCCCCcHHHHHHH
Confidence            9999999997543    678889999999999999999999999999999998889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCC
Q 021960          187 HAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLR  266 (305)
Q Consensus       187 aa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (305)
                      +++++|+++++.|++++||+||+|+||+++|+|.......                 ++..+..   ..  ..|.+++.+
T Consensus       159 aa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~-----------------~~~~~~~---~~--~~p~~r~~~  216 (258)
T 3oid_A          159 AALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPNR-----------------EDLLEDA---RQ--NTPAGRMVE  216 (258)
T ss_dssp             HHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCTTH-----------------HHHHHHH---HH--HCTTSSCBC
T ss_pred             HHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhcccC-----------------HHHHHHH---Hh--cCCCCCCcC
Confidence            9999999999999999999999999999999986543111                 1111121   11  267889999


Q ss_pred             HHHHHHHHHHhccCCCCceeccEEEecCCccccccc
Q 021960          267 SKDIAEAALYLASDESRYVSGHNLVVDGGVTTSRNC  302 (305)
Q Consensus       267 ~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~~~~  302 (305)
                      |+|+|+.++||+|+.++++||++|.+|||++...++
T Consensus       217 ~~dva~~v~~L~s~~~~~itG~~i~vdGG~~~~~~~  252 (258)
T 3oid_A          217 IKDMVDTVEFLVSSKADMIRGQTIIVDGGRSLLVLE  252 (258)
T ss_dssp             HHHHHHHHHHHTSSTTTTCCSCEEEESTTGGGBCC-
T ss_pred             HHHHHHHHHHHhCcccCCccCCEEEECCCccCCCCC
Confidence            999999999999999999999999999999876554

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=100.00  E-value=5.9e-48  Score=339.10  Aligned_cols=246  Identities=32%  Similarity=0.468  Sum_probs=216.9

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc---CCCCeEEEEecCCCHHHHHHHHHHHHHh
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL---APAPVTFVHCDVSLEEDIENLINSTVSR  103 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~---~~~~v~~~~~D~~d~~~i~~~~~~~~~~  103 (305)
                      .++++|++|||||++|||+++|+.|+++|++|++++|+....+...+.+   .+.++.++.+|++|.++++++++++.+.
T Consensus        16 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   95 (266)
T 4egf_A           16 LRLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEA   95 (266)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            4688999999999999999999999999999999999877665544433   2567999999999999999999999999


Q ss_pred             cCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-CCEEEEecccccccCCCCCccc
Q 021960          104 YGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRG-GGCIISTASVAGVMGGLGPHAY  182 (305)
Q Consensus       104 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y  182 (305)
                      ++++|+||||||....    .++.+.+.++|++.+++|+.+++++++.++|.|.+++ .++||++||..+..+.++...|
T Consensus        96 ~g~id~lv~nAg~~~~----~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  171 (266)
T 4egf_A           96 FGGLDVLVNNAGISHP----QPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPLPDHYAY  171 (266)
T ss_dssp             HTSCSEEEEECCCCCC----CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTCHHH
T ss_pred             cCCCCEEEECCCcCCC----CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccCCCCChHH
Confidence            9999999999998654    5778899999999999999999999999999998766 6899999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCC
Q 021960          183 TASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKG  262 (305)
Q Consensus       183 ~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (305)
                      +++|+++++|+++++.|++++||+||+|+||+++|+|....+..                 ++....   +..  ..|.+
T Consensus       172 ~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~-----------------~~~~~~---~~~--~~p~~  229 (266)
T 4egf_A          172 CTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWGD-----------------EAKSAP---MIA--RIPLG  229 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHTCS-----------------HHHHHH---HHT--TCTTS
T ss_pred             HHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhccC-----------------hHHHHH---HHh--cCCCC
Confidence            99999999999999999999999999999999999996654322                 111111   111  36788


Q ss_pred             CCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          263 TTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       263 ~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      ++.+|+|+|+.++||+++.++++||++|.+|||+++
T Consensus       230 r~~~p~dva~~v~~L~s~~~~~itG~~i~vdGG~~~  265 (266)
T 4egf_A          230 RFAVPHEVSDAVVWLASDAASMINGVDIPVDGGYTM  265 (266)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CCcCHHHHHHHHHHHhCchhcCccCcEEEECCCccC
Confidence            999999999999999999999999999999999875

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=100.00  E-value=6.4e-48  Score=335.48  Aligned_cols=243  Identities=31%  Similarity=0.488  Sum_probs=215.2

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCC
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGR  106 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~  106 (305)
                      +++++|++|||||++|||+++|+.|+++|++|++++|++...+...+.+. .++.++.+|++|.++++++++++.+.+|+
T Consensus         5 ~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   83 (248)
T 3op4_A            5 MNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLG-DNGKGMALNVTNPESIEAVLKAITDEFGG   83 (248)
T ss_dssp             TCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHG-GGEEEEECCTTCHHHHHHHHHHHHHHHCC
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc-ccceEEEEeCCCHHHHHHHHHHHHHHcCC
Confidence            46789999999999999999999999999999999998877666555442 34788999999999999999999999999


Q ss_pred             ccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhH
Q 021960          107 LDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASK  186 (305)
Q Consensus       107 id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  186 (305)
                      +|+||||||....    .++.+.+.++|++.+++|+.+++++++.++|.|.+++.|+||++||.++..+.++...|+++|
T Consensus        84 iD~lv~nAg~~~~----~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  159 (248)
T 3op4_A           84 VDILVNNAGITRD----NLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAK  159 (248)
T ss_dssp             CSEEEECCCCCCC----CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHH
T ss_pred             CCEEEECCCCCCC----CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCCChHHHHHH
Confidence            9999999998654    567889999999999999999999999999999988889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCC
Q 021960          187 HAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLR  266 (305)
Q Consensus       187 aa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (305)
                      +++++|+++++.|++++||+||+|+||+++|+|.....                   .+.....   ..  ..|.+++.+
T Consensus       160 ~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~-------------------~~~~~~~---~~--~~p~~r~~~  215 (248)
T 3op4_A          160 AGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKALN-------------------DEQRTAT---LA--QVPAGRLGD  215 (248)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTTSC-------------------HHHHHHH---HH--TCTTCSCBC
T ss_pred             HHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhhcC-------------------HHHHHHH---Hh--cCCCCCCcC
Confidence            99999999999999999999999999999999854321                   1111111   11  367889999


Q ss_pred             HHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          267 SKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       267 ~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      |+|+|+.++||++++++++||++|.+|||++.
T Consensus       216 p~dva~~v~~L~s~~~~~itG~~i~vdgG~~~  247 (248)
T 3op4_A          216 PREIASAVAFLASPEAAYITGETLHVNGGMYM  247 (248)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTTSSC
T ss_pred             HHHHHHHHHHHcCCccCCccCcEEEECCCeec
Confidence            99999999999999999999999999999864

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=100.00  E-value=6.2e-48  Score=339.68  Aligned_cols=246  Identities=30%  Similarity=0.465  Sum_probs=215.8

Q ss_pred             CCCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHH
Q 021960           25 SHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVS  102 (305)
Q Consensus        25 ~~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~  102 (305)
                      +...+++|++|||||++|||+++|+.|+++|++|++++|+....+.+.+.+  .+.++.++.+|++|.++++++++++.+
T Consensus        22 m~~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  101 (270)
T 3ftp_A           22 MDKTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLK  101 (270)
T ss_dssp             -CCTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHH
Confidence            445788999999999999999999999999999999999877665544433  245688999999999999999999999


Q ss_pred             hcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccc
Q 021960          103 RYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAY  182 (305)
Q Consensus       103 ~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y  182 (305)
                      .++++|+||||||....    .++.+.+.++|++.+++|+.+++++++.+++.|.+++.|+||++||.++..+.++...|
T Consensus       102 ~~g~iD~lvnnAg~~~~----~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  177 (270)
T 3ftp_A          102 EFGALNVLVNNAGITQD----QLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGNPGQVNY  177 (270)
T ss_dssp             HHSCCCEEEECCCCCCC----BCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBHHH
T ss_pred             HcCCCCEEEECCCCCCC----CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCCchhH
Confidence            99999999999998654    56778899999999999999999999999999998888999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCC
Q 021960          183 TASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKG  262 (305)
Q Consensus       183 ~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (305)
                      +++|+++++|+++++.|++++||+||+|+||+++|+|.....                   ++....+.   .  ..+.+
T Consensus       178 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~-------------------~~~~~~~~---~--~~p~~  233 (270)
T 3ftp_A          178 AAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKGLP-------------------QEQQTALK---T--QIPLG  233 (270)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHHSC-------------------HHHHHHHH---T--TCTTC
T ss_pred             HHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhhcC-------------------HHHHHHHH---h--cCCCC
Confidence            999999999999999999999999999999999999864321                   11111111   1  36788


Q ss_pred             CCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          263 TTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       263 ~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      ++.+|||+|+.++||+++.++++||++|.+|||+..
T Consensus       234 r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~  269 (270)
T 3ftp_A          234 RLGSPEDIAHAVAFLASPQAGYITGTTLHVNGGMFM  269 (270)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSSC
T ss_pred             CCCCHHHHHHHHHHHhCCCcCCccCcEEEECCCccc
Confidence            999999999999999999999999999999999875

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=100.00  E-value=9.1e-48  Score=334.34  Aligned_cols=244  Identities=29%  Similarity=0.425  Sum_probs=214.8

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCC
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGR  106 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~  106 (305)
                      .+++||++|||||++|||+++++.|+++|++|++++|+....+...+.+ +.++.++.+|++|.++++++++++.+.+|+
T Consensus         2 ~~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   80 (247)
T 3rwb_A            2 ERLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI-GKKARAIAADISDPGSVKALFAEIQALTGG   80 (247)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH-CTTEEECCCCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-CCceEEEEcCCCCHHHHHHHHHHHHHHCCC
Confidence            3678999999999999999999999999999999999887766665555 456899999999999999999999999999


Q ss_pred             ccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-CCEEEEecccccccCCCCCccchhh
Q 021960          107 LDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRG-GGCIISTASVAGVMGGLGPHAYTAS  185 (305)
Q Consensus       107 id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~~s  185 (305)
                      +|+||||||....    .++.+.+.++|++.+++|+.+++++++.++|.|.+++ .++||++||..+..+.++...|+++
T Consensus        81 id~lv~nAg~~~~----~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  156 (247)
T 3rwb_A           81 IDILVNNASIVPF----VAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTPNMAAYVAA  156 (247)
T ss_dssp             CSEEEECCCCCCC----CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTCTTCHHHHHH
T ss_pred             CCEEEECCCCCCC----CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCCCCchhhHHH
Confidence            9999999998643    5778899999999999999999999999999998876 6999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCC
Q 021960          186 KHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL  265 (305)
Q Consensus       186 Kaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (305)
                      |+++++|+++++.|++++||+||+|+||+++|++.......                  .. .....   . ..+.+++.
T Consensus       157 Kaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~------------------~~-~~~~~---~-~~~~~r~~  213 (247)
T 3rwb_A          157 KGGVIGFTRALATELGKYNITANAVTPGLIESDGVKASPHN------------------EA-FGFVE---M-LQAMKGKG  213 (247)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSGGG------------------GG-HHHHH---H-HSSSCSCB
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCccccccChh------------------HH-HHHHh---c-ccccCCCc
Confidence            99999999999999999999999999999999986542111                  00 01111   1 14678889


Q ss_pred             CHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          266 RSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       266 ~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      +|+|+|+.++||+++.++++||++|.+|||+..
T Consensus       214 ~pedva~~v~~L~s~~~~~itG~~i~vdGG~~~  246 (247)
T 3rwb_A          214 QPEHIADVVSFLASDDARWITGQTLNVDAGMVR  246 (247)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTSSC
T ss_pred             CHHHHHHHHHHHhCccccCCCCCEEEECCCccC
Confidence            999999999999999999999999999999864

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=100.00  E-value=3.1e-47  Score=337.79  Aligned_cols=262  Identities=30%  Similarity=0.428  Sum_probs=213.2

Q ss_pred             CCCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCc----------------chhhhHhhhc--CCCCeEEEEec
Q 021960           25 SHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVED----------------TLGSVLASTL--APAPVTFVHCD   86 (305)
Q Consensus        25 ~~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~----------------~~~~~~~~~~--~~~~v~~~~~D   86 (305)
                      +..++++|++|||||++|||+++|+.|+++|++|++++|+.                ...+...+.+  .+.++.++.+|
T Consensus         5 m~~~l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   84 (286)
T 3uve_A            5 MTGRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVD   84 (286)
T ss_dssp             -CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECC
T ss_pred             CCcccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcC
Confidence            44578999999999999999999999999999999998862                2222222222  34679999999


Q ss_pred             CCCHHHHHHHHHHHHHhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-CCEEE
Q 021960           87 VSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRG-GGCII  165 (305)
Q Consensus        87 ~~d~~~i~~~~~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv  165 (305)
                      ++|.++++++++++.+.+|++|+||||||.....   .++.+.+.++|++.+++|+.+++++++.++|.|.+++ .|+||
T Consensus        85 v~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~---~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv  161 (286)
T 3uve_A           85 VRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGG---DTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSII  161 (286)
T ss_dssp             TTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCC---SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEE
T ss_pred             CCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCC---CccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEE
Confidence            9999999999999999999999999999986542   3477889999999999999999999999999998765 68999


Q ss_pred             EecccccccCCCCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHH
Q 021960          166 STASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQK  245 (305)
Q Consensus       166 ~isS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (305)
                      ++||..+..+.++...|++||+++++|+++++.|++++||+||+|+||+++|+|.......      .........+..+
T Consensus       162 ~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~------~~~~~~~~~~~~~  235 (286)
T 3uve_A          162 LTSSVGGLKAYPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTF------KMFRPDLENPGPD  235 (286)
T ss_dssp             EECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSSHHHH------HHHCTTSSSCCHH
T ss_pred             EECchhhccCCCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcccccchh------hhccccccccchh
Confidence            9999999999999999999999999999999999999999999999999999986431100      0000000112222


Q ss_pred             HHHHHHHHHhhcCCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          246 EVRKMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      ..........  ..| +++.+|+|+|+.++||+|++++|+||++|.+|||+++
T Consensus       236 ~~~~~~~~~~--~~p-~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG~~l  285 (286)
T 3uve_A          236 DMAPICQMFH--TLP-IPWVEPIDISNAVLFFASDEARYITGVTLPIDAGSCL  285 (286)
T ss_dssp             HHHHHHHTTC--SSS-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             hHHHHHHhhh--ccC-CCcCCHHHHHHHHHHHcCccccCCcCCEEeECCcccc
Confidence            2222222222  244 7889999999999999999999999999999999875

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=100.00  E-value=1e-47  Score=337.58  Aligned_cols=247  Identities=30%  Similarity=0.450  Sum_probs=206.5

Q ss_pred             CCCCCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHH
Q 021960           23 PPSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVS  102 (305)
Q Consensus        23 ~~~~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~  102 (305)
                      +....++++|++|||||++|||+++|+.|+++|++|++++|+....+.+.+.. +.++.++.+|++|.++++++++++.+
T Consensus        19 ~~~m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~   97 (266)
T 3grp_A           19 PGSMFKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADL-GKDVFVFSANLSDRKSIKQLAEVAER   97 (266)
T ss_dssp             --CTTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-CSSEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CcchhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-CCceEEEEeecCCHHHHHHHHHHHHH
Confidence            33445789999999999999999999999999999999999877766655544 45689999999999999999999999


Q ss_pred             hcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccc
Q 021960          103 RYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAY  182 (305)
Q Consensus       103 ~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y  182 (305)
                      .++++|+||||||....    .++.+.+.++|++.+++|+.+++++++.+++.|.+++.|+||++||..+..+.++...|
T Consensus        98 ~~g~iD~lvnnAg~~~~----~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y  173 (266)
T 3grp_A           98 EMEGIDILVNNAGITRD----GLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVGNPGQTNY  173 (266)
T ss_dssp             HHTSCCEEEECCCCC---------CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC-------CHHHH
T ss_pred             HcCCCCEEEECCCCCCC----CCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcCCCCCchhH
Confidence            99999999999998644    56778899999999999999999999999999998888999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCC
Q 021960          183 TASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKG  262 (305)
Q Consensus       183 ~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (305)
                      +++|+++++|+++++.|++++||+||+|+||+++|+|.....                   ++..+.+   ..  ..|.+
T Consensus       174 ~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~-------------------~~~~~~~---~~--~~p~~  229 (266)
T 3grp_A          174 CAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDKLN-------------------EKQKEAI---MA--MIPMK  229 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHTCC-------------------HHHHHHH---HT--TCTTC
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhccC-------------------HHHHHHH---Hh--cCCCC
Confidence            999999999999999999999999999999999999854321                   1111111   11  36788


Q ss_pred             CCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          263 TTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       263 ~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      ++.+|+|+|+.++||++++++++||++|.+|||+++
T Consensus       230 r~~~~edvA~~v~~L~s~~~~~itG~~i~vdGG~~~  265 (266)
T 3grp_A          230 RMGIGEEIAFATVYLASDEAAYLTGQTLHINGGMAM  265 (266)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC--
T ss_pred             CCcCHHHHHHHHHHHhCccccCccCCEEEECCCeee
Confidence            999999999999999999999999999999999864

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=100.00  E-value=3.9e-47  Score=334.74  Aligned_cols=246  Identities=33%  Similarity=0.451  Sum_probs=214.6

Q ss_pred             CCCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           25 SHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        25 ~~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      +..++++|++|||||++|||+++|+.|+++|++|++++|+....+...+.+ +.++.++.+|++|.++++++++++.+.+
T Consensus         5 m~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   83 (271)
T 3tzq_B            5 MTAELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV-GRGAVHHVVDLTNEVSVRALIDFTIDTF   83 (271)
T ss_dssp             --CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHH-CTTCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCcCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-CCCeEEEECCCCCHHHHHHHHHHHHHHc
Confidence            345788999999999999999999999999999999999987776665555 4568899999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchh
Q 021960          105 GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTA  184 (305)
Q Consensus       105 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~  184 (305)
                      |++|+||||||.....  ...+.+.+.++|++.+++|+.+++++++.++|.|.+++.++||++||..+..+.++...|++
T Consensus        84 g~id~lv~nAg~~~~~--~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~a  161 (271)
T 3tzq_B           84 GRLDIVDNNAAHSDPA--DMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAAYDMSTAYAC  161 (271)
T ss_dssp             SCCCEEEECCCCCCTT--CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSBCSSCHHHHH
T ss_pred             CCCCEEEECCCCCCCC--CCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcCCCCCChHHHH
Confidence            9999999999986331  14577889999999999999999999999999999988999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCC
Q 021960          185 SKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT  264 (305)
Q Consensus       185 sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (305)
                      ||+++++|+++++.|++++||+||+|+||+++|++....+.                  ++..+.+   ..  ..+.+++
T Consensus       162 sKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~------------------~~~~~~~---~~--~~~~~r~  218 (271)
T 3tzq_B          162 TKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVGLP------------------QPIVDIF---AT--HHLAGRI  218 (271)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC---C------------------HHHHHHH---HT--TSTTSSC
T ss_pred             HHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccccccCC------------------HHHHHHH---Hh--cCCCCCC
Confidence            99999999999999999999999999999999998542211                  1111111   11  3677899


Q ss_pred             CCHHHHHHHHHHhccCCCCceeccEEEecCCc
Q 021960          265 LRSKDIAEAALYLASDESRYVSGHNLVVDGGV  296 (305)
Q Consensus       265 ~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~  296 (305)
                      .+|+|+|+.++||+++.++++||++|.+|||+
T Consensus       219 ~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~  250 (271)
T 3tzq_B          219 GEPHEIAELVCFLASDRAAFITGQVIAADSGL  250 (271)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             cCHHHHHHHHHHHhCcccCCcCCCEEEECCCc
Confidence            99999999999999999999999999999994

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.7e-47  Score=338.81  Aligned_cols=262  Identities=30%  Similarity=0.442  Sum_probs=208.2

Q ss_pred             CCCCCCCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecC-cchhhhHhhhc---CCCCeEEEEecCCCHHHHHHH
Q 021960           21 DAPPSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVE-DTLGSVLASTL---APAPVTFVHCDVSLEEDIENL   96 (305)
Q Consensus        21 ~~~~~~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~-~~~~~~~~~~~---~~~~v~~~~~D~~d~~~i~~~   96 (305)
                      ..+....++++|++|||||++|||+++|+.|+++|++|++++|+ ....+...+.+   .+.++.++.+|++|.++++++
T Consensus        15 ~~n~~~~~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~   94 (281)
T 3v2h_A           15 TENLYFQSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADM   94 (281)
T ss_dssp             -------CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHH
T ss_pred             ccchhhhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHH
Confidence            34445568899999999999999999999999999999999984 33333333322   246799999999999999999


Q ss_pred             HHHHHHhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCC
Q 021960           97 INSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGG  176 (305)
Q Consensus        97 ~~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~  176 (305)
                      ++++.+++|++|+||||||....    .++.+.+.++|++.+++|+.+++++++.++|.|.+++.|+||++||.++..+.
T Consensus        95 ~~~~~~~~g~iD~lv~nAg~~~~----~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~  170 (281)
T 3v2h_A           95 MAMVADRFGGADILVNNAGVQFV----EKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVAS  170 (281)
T ss_dssp             HHHHHHHTSSCSEEEECCCCCCC----CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC
T ss_pred             HHHHHHHCCCCCEEEECCCCCCC----CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcccccCC
Confidence            99999999999999999998644    56788999999999999999999999999999998888999999999999999


Q ss_pred             CCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhh
Q 021960          177 LGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSG  256 (305)
Q Consensus       177 ~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (305)
                      ++...|++||+++++|+++++.|++++||+||+|+||+++|++..........        ..+...++..   ......
T Consensus       171 ~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~--------~~~~~~~~~~---~~~~~~  239 (281)
T 3v2h_A          171 PFKSAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQAR--------TRGITEEQVI---NEVMLK  239 (281)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC---------------------------------------
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhcchhhh--------hcCCCHHHHH---HHHHHh
Confidence            99999999999999999999999999999999999999999996654322100        0001111110   111111


Q ss_pred             cCCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          257 LGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       257 ~~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                       ..+.+++++|+|+|+.++||++++++++||++|.+|||++.
T Consensus       240 -~~p~~r~~~~edvA~~v~~L~s~~a~~itG~~i~vdGG~~~  280 (281)
T 3v2h_A          240 -GQPTKKFITVEQVASLALYLAGDDAAQITGTHVSMDGGWTA  280 (281)
T ss_dssp             -CCTTCSCBCHHHHHHHHHHHHSSGGGGCCSCEEEESTTGGG
T ss_pred             -cCCCCCccCHHHHHHHHHHHcCCCcCCCCCcEEEECCCccC
Confidence             46788999999999999999999999999999999999864

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=100.00  E-value=3.6e-47  Score=336.47  Aligned_cols=251  Identities=36%  Similarity=0.524  Sum_probs=218.1

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      .++++|++|||||++|||+++|+.|+++|++|++++|+....+.+.+.+  .+.++.++.+|++|.++++++++++.+.+
T Consensus         4 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   83 (280)
T 3tox_A            4 SRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRF   83 (280)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            4678999999999999999999999999999999999887766655544  24578999999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccc-cCCCCCccch
Q 021960          105 GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGV-MGGLGPHAYT  183 (305)
Q Consensus       105 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~-~~~~~~~~Y~  183 (305)
                      +++|+||||||.....   .++.+.+.++|++.+++|+.+++++++.++|.|.+++.|+||++||..+. .+.++...|+
T Consensus        84 g~iD~lvnnAg~~~~~---~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~  160 (280)
T 3tox_A           84 GGLDTAFNNAGALGAM---GEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTAGFAGVAPYA  160 (280)
T ss_dssp             SCCCEEEECCCCCCSC---SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTBCCTTCHHHH
T ss_pred             CCCCEEEECCCCCCCC---CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcCCCCCchhHH
Confidence            9999999999976432   56788999999999999999999999999999999889999999999998 7888899999


Q ss_pred             hhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCC
Q 021960          184 ASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGT  263 (305)
Q Consensus       184 ~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (305)
                      +||+++++|+++++.|++++||+||+|+||+++|++....+...               ..+....+.    . ..+.++
T Consensus       161 asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~---------------~~~~~~~~~----~-~~p~~r  220 (280)
T 3tox_A          161 ASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGA---------------APETRGFVE----G-LHALKR  220 (280)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGSTTC---------------CTHHHHHHH----T-TSTTSS
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhcccc---------------CHHHHHHHh----c-cCccCC
Confidence            99999999999999999999999999999999999865432210               011111111    1 357788


Q ss_pred             CCCHHHHHHHHHHhccCCCCceeccEEEecCCccccc
Q 021960          264 TLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTSR  300 (305)
Q Consensus       264 ~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~~  300 (305)
                      +.+|+|+|+.++||+++.++++||++|.+|||+++.+
T Consensus       221 ~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG~~~~~  257 (280)
T 3tox_A          221 IARPEEIAEAALYLASDGASFVTGAALLADGGASVTK  257 (280)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCC
T ss_pred             CcCHHHHHHHHHHHhCccccCCcCcEEEECCCccccc
Confidence            9999999999999999999999999999999998754

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=100.00  E-value=2.7e-47  Score=335.47  Aligned_cols=242  Identities=33%  Similarity=0.527  Sum_probs=211.6

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecC-cchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHH
Q 021960           26 HRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVE-DTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVS  102 (305)
Q Consensus        26 ~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~-~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~  102 (305)
                      ..++++|++|||||++|||+++|+.|+++|++|++++|+ ....+.+.+.+  .+.++.++.+|++|.++++++++++.+
T Consensus        23 ~~~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~  102 (269)
T 4dmm_A           23 ALPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIE  102 (269)
T ss_dssp             -CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            357889999999999999999999999999999998884 33333333322  345789999999999999999999999


Q ss_pred             hcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccc
Q 021960          103 RYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAY  182 (305)
Q Consensus       103 ~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y  182 (305)
                      .+|++|+||||||....    .++.+.+.++|++.+++|+.+++++++.+++.|.+++.|+||++||.++..+.++...|
T Consensus       103 ~~g~id~lv~nAg~~~~----~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  178 (269)
T 4dmm_A          103 RWGRLDVLVNNAGITRD----TLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGNPGQANY  178 (269)
T ss_dssp             HHSCCCEEEECCCCCCC----CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHCCTTCHHH
T ss_pred             HcCCCCEEEECCCCCCC----CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCCchhH
Confidence            99999999999998654    56788999999999999999999999999999998888999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCC
Q 021960          183 TASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKG  262 (305)
Q Consensus       183 ~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (305)
                      ++||+++++|+++++.|++++||+||+|+||+++|+|......                         ..+..  ..+.+
T Consensus       179 ~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~-------------------------~~~~~--~~p~~  231 (269)
T 4dmm_A          179 SAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTSELAA-------------------------EKLLE--VIPLG  231 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCHHHH-------------------------HHHGG--GCTTS
T ss_pred             HHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCcccccccH-------------------------HHHHh--cCCCC
Confidence            9999999999999999999999999999999999998543210                         11111  35778


Q ss_pred             CCCCHHHHHHHHHHhccC-CCCceeccEEEecCCccc
Q 021960          263 TTLRSKDIAEAALYLASD-ESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       263 ~~~~~~dva~~v~~l~s~-~~~~~tG~~i~idgG~~~  298 (305)
                      ++.+|+|+|+.++||+++ .++++||++|.+|||+++
T Consensus       232 r~~~~~dvA~~v~~l~s~~~~~~itG~~i~vdGG~~~  268 (269)
T 4dmm_A          232 RYGEAAEVAGVVRFLAADPAAAYITGQVINIDGGLVM  268 (269)
T ss_dssp             SCBCHHHHHHHHHHHHHCGGGGGCCSCEEEESTTSCC
T ss_pred             CCCCHHHHHHHHHHHhCCcccCCCcCCEEEECCCeec
Confidence            999999999999999998 788999999999999875

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=100.00  E-value=2.6e-47  Score=337.23  Aligned_cols=254  Identities=28%  Similarity=0.395  Sum_probs=214.7

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhcC
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRYG  105 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g  105 (305)
                      .+++|++|||||++|||+++|+.|+++|++|++++|+....+...+.+  .+.++.++.+|++|.++++++++++.+.+|
T Consensus        21 m~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  100 (279)
T 3sju_A           21 MSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFG  100 (279)
T ss_dssp             ----CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            557999999999999999999999999999999999877665554443  245799999999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHH--HHHcCCCCEEEEecccccccCCCCCccch
Q 021960          106 RLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAAR--VMINRGGGCIISTASVAGVMGGLGPHAYT  183 (305)
Q Consensus       106 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~~~~~~~iv~isS~~~~~~~~~~~~Y~  183 (305)
                      ++|+||||||....    .++.+.+.++|++.+++|+.+++++++.++|  .|.+++.|+||++||.++..+.++...|+
T Consensus       101 ~id~lv~nAg~~~~----~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~  176 (279)
T 3sju_A          101 PIGILVNSAGRNGG----GETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGVMYAAPYT  176 (279)
T ss_dssp             SCCEEEECCCCCCC----SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTSCCTTCHHHH
T ss_pred             CCcEEEECCCCCCC----CChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhccCCCCChhHH
Confidence            99999999998654    5778899999999999999999999999999  57777889999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCC
Q 021960          184 ASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGT  263 (305)
Q Consensus       184 ~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (305)
                      ++|+++++|+++++.|++++||+||+|+||+++|+|..........        ......++..+.+.   .  ..+.++
T Consensus       177 asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~--------~~~~~~~~~~~~~~---~--~~p~~r  243 (279)
T 3sju_A          177 ASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYAR--------HWGVTEQEVHERFN---A--KIPLGR  243 (279)
T ss_dssp             HHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCS--------SSCCCHHHHHHHHH---T--TCTTSS
T ss_pred             HHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhh--------cccCChHHHHHHHH---h--cCCCCC
Confidence            9999999999999999999999999999999999997654332110        00111122222222   2  367889


Q ss_pred             CCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          264 TLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       264 ~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      +.+|+|+|+.++||+++.++++||++|.+|||++.
T Consensus       244 ~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG~~~  278 (279)
T 3sju_A          244 YSTPEEVAGLVGYLVTDAAASITAQALNVCGGLGN  278 (279)
T ss_dssp             CBCHHHHHHHHHHHTSSGGGGCCSCEEEESTTCCC
T ss_pred             CCCHHHHHHHHHHHhCccccCcCCcEEEECCCccC
Confidence            99999999999999999999999999999999875

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=100.00  E-value=5.1e-47  Score=331.80  Aligned_cols=255  Identities=34%  Similarity=0.456  Sum_probs=216.6

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcC
Q 021960           26 HRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYG  105 (305)
Q Consensus        26 ~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g  105 (305)
                      ..++++|++|||||++|||+++|+.|+++|++|++++|+....+...+.+ +.++.++.+|++|.++++++++++.+++|
T Consensus         3 m~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   81 (259)
T 4e6p_A            3 MKRLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI-GPAAYAVQMDVTRQDSIDAAIAATVEHAG   81 (259)
T ss_dssp             -CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-CTTEEEEECCTTCHHHHHHHHHHHHHHSS
T ss_pred             cccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-CCCceEEEeeCCCHHHHHHHHHHHHHHcC
Confidence            34688999999999999999999999999999999999887766655555 34588999999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-CCEEEEecccccccCCCCCccchh
Q 021960          106 RLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRG-GGCIISTASVAGVMGGLGPHAYTA  184 (305)
Q Consensus       106 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~~  184 (305)
                      ++|+||||||....    .++.+.+.++|++.+++|+.+++++++.+++.|.+++ .|+||++||..+..+.++...|++
T Consensus        82 ~id~lv~~Ag~~~~----~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  157 (259)
T 4e6p_A           82 GLDILVNNAALFDL----APIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGEALVAIYCA  157 (259)
T ss_dssp             SCCEEEECCCCCCC----BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHH
T ss_pred             CCCEEEECCCcCCC----CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCCCCChHHHH
Confidence            99999999998644    5778899999999999999999999999999998766 789999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCC
Q 021960          185 SKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT  264 (305)
Q Consensus       185 sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (305)
                      +|+++++|+++++.|++++||+||+|+||+++|++.......      ....  ...+..+..+.+..     ..|.+++
T Consensus       158 sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~------~~~~--~~~~~~~~~~~~~~-----~~p~~r~  224 (259)
T 4e6p_A          158 TKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDGVDAL------FARY--ENRPRGEKKRLVGE-----AVPFGRM  224 (259)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHHHHHHH------HHHH--HTCCTTHHHHHHHH-----HSTTSSC
T ss_pred             HHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhhhhhhh------hhhh--ccCChHHHHHHHhc-----cCCCCCC
Confidence            999999999999999999999999999999999986543100      0000  00011122222211     2678899


Q ss_pred             CCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          265 LRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       265 ~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      .+|+|+|+.++||++++++++||++|.+|||.+.
T Consensus       225 ~~~~dva~~v~~L~s~~~~~itG~~i~vdgG~~~  258 (259)
T 4e6p_A          225 GTAEDLTGMAIFLASAESDYIVSQTYNVDGGNWM  258 (259)
T ss_dssp             BCTHHHHHHHHHTTSGGGTTCCSCEEEESTTSSC
T ss_pred             cCHHHHHHHHHHHhCCccCCCCCCEEEECcChhc
Confidence            9999999999999999999999999999999875

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.6e-47  Score=339.19  Aligned_cols=253  Identities=32%  Similarity=0.428  Sum_probs=213.0

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      +++++|++|||||++|||+++|+.|+++|++|++++|+....+...+.+  .+.++.++.+|++|.++++++++++.+.+
T Consensus        24 ~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  103 (283)
T 3v8b_A           24 MNQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKF  103 (283)
T ss_dssp             ---CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            4678999999999999999999999999999999999987766655544  24578999999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEeccccccc--CCCCCccc
Q 021960          105 GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVM--GGLGPHAY  182 (305)
Q Consensus       105 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~--~~~~~~~Y  182 (305)
                      |++|+||||||.....   .++.+.+.++|++.+++|+.+++++++.++|.|.+++.|+||++||.++..  +.++...|
T Consensus       104 g~iD~lVnnAg~~~~~---~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~~~Y  180 (283)
T 3v8b_A          104 GHLDIVVANAGINGVW---APIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTFTTPGATAY  180 (283)
T ss_dssp             SCCCEEEECCCCCCCB---CCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCSTTCHHH
T ss_pred             CCCCEEEECCCCCCCC---CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccCCCCCCchHH
Confidence            9999999999986432   567789999999999999999999999999999988889999999999987  77889999


Q ss_pred             hhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCC-
Q 021960          183 TASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLK-  261 (305)
Q Consensus       183 ~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  261 (305)
                      ++||+++++|+++++.|++++||+||+|+||+++|+|.......   . ....    ..+.       .....  ..|. 
T Consensus       181 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~---~-~~~~----~~~~-------~~~~~--~~p~~  243 (283)
T 3v8b_A          181 TATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLR---H-EEET----AIPV-------EWPKG--QVPIT  243 (283)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTBC---C-HHHH----SCCC-------BCTTC--SCGGG
T ss_pred             HHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCcccccccc---c-chhh----hhhh-------hhhhh--cCccc
Confidence            99999999999999999999999999999999999986543211   0 0000    0000       00000  1334 


Q ss_pred             -CCCCCHHHHHHHHHHhccCCCCceeccEEEecCCcccc
Q 021960          262 -GTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTS  299 (305)
Q Consensus       262 -~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~  299 (305)
                       +++.+|||+|+.++||+|+.++++||++|.+|||+++.
T Consensus       244 ~~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~~~~  282 (283)
T 3v8b_A          244 DGQPGRSEDVAELIRFLVSERARHVTGSPVWIDGGQGLL  282 (283)
T ss_dssp             TTCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTHHHH
T ss_pred             cCCCCCHHHHHHHHHHHcCccccCCcCCEEEECcCcccc
Confidence             88899999999999999999999999999999998764

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=100.00  E-value=6.5e-47  Score=336.84  Aligned_cols=247  Identities=30%  Similarity=0.445  Sum_probs=217.5

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcC---CCCeEEEEecCCCHHHHHHHHHHHHH
Q 021960           26 HRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLA---PAPVTFVHCDVSLEEDIENLINSTVS  102 (305)
Q Consensus        26 ~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~i~~~~~~~~~  102 (305)
                      ..++++|++|||||++|||+++|+.|+++|++|++++|+....+...+.+.   ..++.++.+|++|.++++++++++.+
T Consensus        36 m~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  115 (293)
T 3rih_A           36 MFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVD  115 (293)
T ss_dssp             TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHH
Confidence            457889999999999999999999999999999999999877666555442   25789999999999999999999999


Q ss_pred             hcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccc-cCCCCCcc
Q 021960          103 RYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGV-MGGLGPHA  181 (305)
Q Consensus       103 ~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~-~~~~~~~~  181 (305)
                      .++++|+||||||....    .++.+.+.++|++.+++|+.+++++++.++|.|.+++.++||++||..+. .+.++...
T Consensus       116 ~~g~iD~lvnnAg~~~~----~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~~~~~~~~~  191 (293)
T 3rih_A          116 AFGALDVVCANAGIFPE----ARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTGYPGWSH  191 (293)
T ss_dssp             HHSCCCEEEECCCCCCC----CCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTTBBCTTCHH
T ss_pred             HcCCCCEEEECCCCCCC----CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhccCCCCCCHH
Confidence            99999999999998644    56788999999999999999999999999999998888999999999986 78889999


Q ss_pred             chhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCC
Q 021960          182 YTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLK  261 (305)
Q Consensus       182 Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (305)
                      |++||+++++|+++++.|++++||+||+|+||+++|++.....                   ++..+.   +..  ..+.
T Consensus       192 Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~-------------------~~~~~~---~~~--~~p~  247 (293)
T 3rih_A          192 YGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDMG-------------------EEYISG---MAR--SIPM  247 (293)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHTC-------------------HHHHHH---HHT--TSTT
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhhcc-------------------HHHHHH---HHh--cCCC
Confidence            9999999999999999999999999999999999999854321                   111111   111  3678


Q ss_pred             CCCCCHHHHHHHHHHhccCCCCceeccEEEecCCccccc
Q 021960          262 GTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTSR  300 (305)
Q Consensus       262 ~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~~  300 (305)
                      +++.+|+|+|+.++||++++++++||++|.+|||+++..
T Consensus       248 ~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG~~~~~  286 (293)
T 3rih_A          248 GMLGSPVDIGHLAAFLATDEAGYITGQAIVVDGGQVLPE  286 (293)
T ss_dssp             SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTCBS
T ss_pred             CCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCccCCC
Confidence            899999999999999999999999999999999987643

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=100.00  E-value=6.2e-47  Score=335.09  Aligned_cols=250  Identities=25%  Similarity=0.344  Sum_probs=216.5

Q ss_pred             CCCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcC--C---CCeEEEEecCCCHHHHHHHHHH
Q 021960           25 SHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLA--P---APVTFVHCDVSLEEDIENLINS   99 (305)
Q Consensus        25 ~~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~--~---~~v~~~~~D~~d~~~i~~~~~~   99 (305)
                      +..++++|++|||||++|||+++|+.|+++|++|++++|+....+...+.+.  +   .++.++.+|++|.+++++++++
T Consensus         5 m~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   84 (281)
T 3svt_A            5 MQLSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDA   84 (281)
T ss_dssp             ---CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHH
T ss_pred             CccCcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHH
Confidence            4457889999999999999999999999999999999998776555444331  1   2689999999999999999999


Q ss_pred             HHHhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCC
Q 021960          100 TVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGP  179 (305)
Q Consensus       100 ~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~  179 (305)
                      +.+.+|++|+||||||.....   .++.+.+.++|++.+++|+.+++++++.+++.|.+++.|+||++||.++..+.++.
T Consensus        85 ~~~~~g~id~lv~nAg~~~~~---~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  161 (281)
T 3svt_A           85 VTAWHGRLHGVVHCAGGSENI---GPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHRWF  161 (281)
T ss_dssp             HHHHHSCCCEEEECCCCCCCC---CCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTTC
T ss_pred             HHHHcCCCCEEEECCCcCCCC---CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCCCCCC
Confidence            999999999999999974332   57788999999999999999999999999999999889999999999999999999


Q ss_pred             ccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCC
Q 021960          180 HAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGN  259 (305)
Q Consensus       180 ~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (305)
                      ..|++||+++++|+++++.|++++||+||+|+||+++|+|.......                 .+..+.+   ..  ..
T Consensus       162 ~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~-----------------~~~~~~~---~~--~~  219 (281)
T 3svt_A          162 GAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITES-----------------AELSSDY---AM--CT  219 (281)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTC-----------------HHHHHHH---HH--HC
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcccC-----------------HHHHHHH---Hh--cC
Confidence            99999999999999999999999999999999999999996543221                 1111111   11  25


Q ss_pred             CCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCcccc
Q 021960          260 LKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTS  299 (305)
Q Consensus       260 ~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~  299 (305)
                      +.+++.+|+|+|+.++||+++.++++||++|.+|||....
T Consensus       220 p~~r~~~~~dva~~~~~l~s~~~~~itG~~~~vdgG~~~~  259 (281)
T 3svt_A          220 PLPRQGEVEDVANMAMFLLSDAASFVTGQVINVDGGQMLR  259 (281)
T ss_dssp             SSSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGS
T ss_pred             CCCCCCCHHHHHHHHHHHhCcccCCCCCCEEEeCCChhcc
Confidence            7889999999999999999999999999999999998775

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=100.00  E-value=2.5e-47  Score=337.01  Aligned_cols=251  Identities=34%  Similarity=0.506  Sum_probs=215.2

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCC
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGR  106 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~  106 (305)
                      .++++|++|||||++|||+++|+.|+++|++|++++|+....+...+.+ +.++.++.+|++|.++++++++++.+.+++
T Consensus        25 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  103 (277)
T 3gvc_A           25 PDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI-GCGAAACRVDVSDEQQIIAMVDACVAAFGG  103 (277)
T ss_dssp             --CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH-CSSCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-CCcceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            4788999999999999999999999999999999999887766665555 456889999999999999999999999999


Q ss_pred             ccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhH
Q 021960          107 LDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASK  186 (305)
Q Consensus       107 id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  186 (305)
                      +|+||||||....    .++.+.+.++|++.+++|+.+++++++.++|.|.+++.|+||++||..+..+.++...|+++|
T Consensus       104 iD~lvnnAg~~~~----~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~asK  179 (277)
T 3gvc_A          104 VDKLVANAGVVHL----ASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVGGTGAYGMSK  179 (277)
T ss_dssp             CCEEEECCCCCCC----BCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred             CCEEEECCCCCCC----CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCchhHHHHH
Confidence            9999999998744    567789999999999999999999999999999998899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCC
Q 021960          187 HAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLR  266 (305)
Q Consensus       187 aa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (305)
                      +++++|+++++.|++++||+||+|+||+++|+|.............        .....   ...      ..+.+++.+
T Consensus       180 aa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~--------~~~~~---~~~------~~~~~r~~~  242 (277)
T 3gvc_A          180 AGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQTAMAMFDGALG--------AGGAR---SMI------ARLQGRMAA  242 (277)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTCC--------------CCHH---HHH------HHHHSSCBC
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEeeCCccCchHHHhhhcchhhHH--------HHhhh---hhh------hccccCCCC
Confidence            9999999999999999999999999999999996654322100000        00000   000      124478889


Q ss_pred             HHHHHHHHHHhccCCCCceeccEEEecCCcccc
Q 021960          267 SKDIAEAALYLASDESRYVSGHNLVVDGGVTTS  299 (305)
Q Consensus       267 ~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~  299 (305)
                      |||+|+.++||++++++++||++|.+|||++..
T Consensus       243 pedvA~~v~~L~s~~a~~itG~~i~vdGG~~~~  275 (277)
T 3gvc_A          243 PEEMAGIVVFLLSDDASMITGTTQIADGGTIAA  275 (277)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGS
T ss_pred             HHHHHHHHHHHcCCccCCccCcEEEECCcchhc
Confidence            999999999999999999999999999998754

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=100.00  E-value=7.9e-47  Score=334.36  Aligned_cols=262  Identities=28%  Similarity=0.414  Sum_probs=212.3

Q ss_pred             CCCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcc------------hhhhHhhhc--CCCCeEEEEecCCCH
Q 021960           25 SHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDT------------LGSVLASTL--APAPVTFVHCDVSLE   90 (305)
Q Consensus        25 ~~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~------------~~~~~~~~~--~~~~v~~~~~D~~d~   90 (305)
                      .+.++++|++|||||++|||+++|+.|+++|++|++++|++.            ..+...+.+  .+.++.++.+|++|.
T Consensus         4 ~m~~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~   83 (281)
T 3s55_A            4 SMADFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDR   83 (281)
T ss_dssp             --CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCH
T ss_pred             cccccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCH
Confidence            345789999999999999999999999999999999999632            222222111  356799999999999


Q ss_pred             HHHHHHHHHHHHhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEeccc
Q 021960           91 EDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASV  170 (305)
Q Consensus        91 ~~i~~~~~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~  170 (305)
                      ++++++++++.+.+|++|+||||||....    .++.+.+.++|++.+++|+.+++++++.++|.|.+++.|+||++||.
T Consensus        84 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~----~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~  159 (281)
T 3s55_A           84 AALESFVAEAEDTLGGIDIAITNAGISTI----ALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSM  159 (281)
T ss_dssp             HHHHHHHHHHHHHHTCCCEEEECCCCCCC----CCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCG
T ss_pred             HHHHHHHHHHHHhcCCCCEEEECCCCCCC----CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCh
Confidence            99999999999999999999999998644    56788999999999999999999999999999998888999999999


Q ss_pred             ccccCCCCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHH
Q 021960          171 AGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKM  250 (305)
Q Consensus       171 ~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (305)
                      .+..+.++...|+++|+++++|+++++.|++++||+||+|+||+++|+|...........      .....+....... 
T Consensus       160 ~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~------~~~~~~~~~~~~~-  232 (281)
T 3s55_A          160 LGHSANFAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMR------PDLEKPTLKDVES-  232 (281)
T ss_dssp             GGGSCCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHHHHHC-------------CCHHHHHH-
T ss_pred             hhcCCCCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchhhhcccc------ccccccchhHHHH-
Confidence            999999999999999999999999999999999999999999999999864321000000      0000011111111 


Q ss_pred             HHHHhhcCCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCcccc
Q 021960          251 EEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTS  299 (305)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~  299 (305)
                        .........+++.+|+|+|+.++||+++.++++||++|.+|||++..
T Consensus       233 --~~~~~~~~~~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG~~~~  279 (281)
T 3s55_A          233 --VFASLHLQYAPFLKPEEVTRAVLFLVDEASSHITGTVLPIDAGATAR  279 (281)
T ss_dssp             --HHHHHCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGG
T ss_pred             --HHHhhhccCcCCCCHHHHHHHHHHHcCCcccCCCCCEEEECCCcccC
Confidence              11111223378899999999999999999999999999999998764

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=100.00  E-value=7.6e-47  Score=330.05  Aligned_cols=248  Identities=28%  Similarity=0.368  Sum_probs=213.7

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCC
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGR  106 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~  106 (305)
                      .+++||++|||||++|||+++|+.|+++|++|++++|++...+.+.+.+ +.++.++.+|++|.++++++++++.+.+++
T Consensus         4 ~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (255)
T 4eso_A            4 GNYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF-GPRVHALRSDIADLNEIAVLGAAAGQTLGA   82 (255)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-GGGEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-CCcceEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            3678999999999999999999999999999999999987766655554 446899999999999999999999999999


Q ss_pred             ccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhH
Q 021960          107 LDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASK  186 (305)
Q Consensus       107 id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  186 (305)
                      +|+||||||....    .++.+.+.++|++.+++|+.+++++++.++|.|.+  .|+||++||.++..+.++...|+++|
T Consensus        83 id~lv~nAg~~~~----~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~asK  156 (255)
T 4eso_A           83 IDLLHINAGVSEL----EPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIRE--GGSIVFTSSVADEGGHPGMSVYSASK  156 (255)
T ss_dssp             EEEEEECCCCCCC----BCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCGGGSSBCTTBHHHHHHH
T ss_pred             CCEEEECCCCCCC----CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhc--CCEEEEECChhhcCCCCCchHHHHHH
Confidence            9999999998643    67888999999999999999999999999998854  58999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCC
Q 021960          187 HAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLR  266 (305)
Q Consensus       187 aa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (305)
                      +++++|+++++.|++++||+||+|+||+++|++......                + +............ ..|.+++.+
T Consensus       157 aa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~----------------~-~~~~~~~~~~~~~-~~p~~r~~~  218 (255)
T 4eso_A          157 AALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGI----------------T-EAERAEFKTLGDN-ITPMKRNGT  218 (255)
T ss_dssp             HHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCTTS----------------C-HHHHHHHHHHHHH-HSTTSSCBC
T ss_pred             HHHHHHHHHHHHHHhhhCcEEEEEecCcccCcccccccC----------------C-hhhHHHHHHHHhc-cCCCCCCcC
Confidence            999999999999999999999999999999998532110                1 1111111111111 267889999


Q ss_pred             HHHHHHHHHHhccCCCCceeccEEEecCCccccc
Q 021960          267 SKDIAEAALYLASDESRYVSGHNLVVDGGVTTSR  300 (305)
Q Consensus       267 ~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~~  300 (305)
                      |||+|+.++||+++ ++++||++|.+|||++..-
T Consensus       219 pedvA~~v~~L~s~-~~~itG~~i~vdGG~~~~l  251 (255)
T 4eso_A          219 ADEVARAVLFLAFE-ATFTTGAKLAVDGGLGQKL  251 (255)
T ss_dssp             HHHHHHHHHHHHHT-CTTCCSCEEEESTTTTTTB
T ss_pred             HHHHHHHHHHHcCc-CcCccCCEEEECCCccccC
Confidence            99999999999998 8999999999999987654

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=100.00  E-value=1.6e-46  Score=328.31  Aligned_cols=249  Identities=28%  Similarity=0.410  Sum_probs=213.2

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcC--CCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLA--PAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~--~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      .+|++|++|||||++|||+++++.|+++|++|++++|+....+...+.+.  +.++.++.+|++|.++++++++++.+.+
T Consensus         2 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   81 (257)
T 3imf_A            2 NAMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKF   81 (257)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            35789999999999999999999999999999999999877666555442  4578999999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-cCCCCEEEEecccccccCCCCCccch
Q 021960          105 GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMI-NRGGGCIISTASVAGVMGGLGPHAYT  183 (305)
Q Consensus       105 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~~iv~isS~~~~~~~~~~~~Y~  183 (305)
                      |++|+||||||....    .++.+.+.++|++.+++|+.++++++++++|.|. +++.++||++||..+..+.++...|+
T Consensus        82 g~id~lv~nAg~~~~----~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  157 (257)
T 3imf_A           82 GRIDILINNAAGNFI----CPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAGPGVIHSA  157 (257)
T ss_dssp             SCCCEEEECCCCCCC----CCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSCCTTCHHHH
T ss_pred             CCCCEEEECCCCCCC----CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccCCCCcHHHH
Confidence            999999999997643    5778899999999999999999999999999994 44579999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHC-cCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCC
Q 021960          184 ASKHAIVGLTKNAACELG-RYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKG  262 (305)
Q Consensus       184 ~sKaa~~~~~~~la~e~~-~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (305)
                      +||+++++|+++++.|++ ++||+||+|+||+++|++.........                +..+.   +..  ..|.+
T Consensus       158 asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~~~----------------~~~~~---~~~--~~p~~  216 (257)
T 3imf_A          158 AAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWISE----------------EMAKR---TIQ--SVPLG  216 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC-----------------------CCSHH---HHT--TSTTC
T ss_pred             HHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhcccCH----------------HHHHH---HHh--cCCCC
Confidence            999999999999999997 779999999999999997543211100                00001   111  35778


Q ss_pred             CCCCHHHHHHHHHHhccCCCCceeccEEEecCCccccc
Q 021960          263 TTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTSR  300 (305)
Q Consensus       263 ~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~~  300 (305)
                      ++.+|||+|+.++||+++.++++||++|.+|||+++..
T Consensus       217 r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~~~  254 (257)
T 3imf_A          217 RLGTPEEIAGLAYYLCSDEAAYINGTCMTMDGGQHLHQ  254 (257)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTSCC
T ss_pred             CCcCHHHHHHHHHHHcCchhcCccCCEEEECCCcccCC
Confidence            99999999999999999999999999999999987643

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=100.00  E-value=1.8e-46  Score=330.79  Aligned_cols=245  Identities=29%  Similarity=0.427  Sum_probs=210.4

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc-CCCCeEEEEecCCCHHHHHHHHHHHHHhcC
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL-APAPVTFVHCDVSLEEDIENLINSTVSRYG  105 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~-~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g  105 (305)
                      .+++||++|||||++|||+++|+.|+++|++|++++|++...+...+.. .+.++.++.+|++|.++++++.+. .+.++
T Consensus        27 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~-~~~~g  105 (273)
T 3uf0_A           27 FSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVKEVADEIADGGGSAEAVVADLADLEGAANVAEE-LAATR  105 (273)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTHHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHH-HHHHS
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHH-HHhcC
Confidence            4788999999999999999999999999999999997654333322222 345689999999999999999544 45668


Q ss_pred             CccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhh
Q 021960          106 RLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTAS  185 (305)
Q Consensus       106 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  185 (305)
                      ++|+||||||....    .++.+.+.++|++.+++|+.+++++++.++|.|.+++.|+||++||..+..+.++...|+++
T Consensus       106 ~iD~lv~nAg~~~~----~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y~as  181 (273)
T 3uf0_A          106 RVDVLVNNAGIIAR----APAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGGRNVAAYAAS  181 (273)
T ss_dssp             CCCEEEECCCCCCC----CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSCHHHHHH
T ss_pred             CCcEEEECCCCCCC----CCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcCCCCCChhHHHH
Confidence            99999999998654    57788999999999999999999999999999998889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCC
Q 021960          186 KHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL  265 (305)
Q Consensus       186 Kaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (305)
                      |+++++|+++++.|++++||+||+|+||+++|++.......                 ++..+.+.   .  ..|.+++.
T Consensus       182 Kaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~-----------------~~~~~~~~---~--~~p~~r~~  239 (273)
T 3uf0_A          182 KHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAALRAD-----------------DERAAEIT---A--RIPAGRWA  239 (273)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTS-----------------HHHHHHHH---H--HSTTSSCB
T ss_pred             HHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhcccC-----------------HHHHHHHH---h--cCCCCCCC
Confidence            99999999999999999999999999999999986543221                 11122221   1  25778999


Q ss_pred             CHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          266 RSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       266 ~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      +|+|+|+.++||++++++++||++|.+|||+..
T Consensus       240 ~pedva~~v~~L~s~~a~~itG~~i~vdGG~~~  272 (273)
T 3uf0_A          240 TPEDMVGPAVFLASDAASYVHGQVLAVDGGWLA  272 (273)
T ss_dssp             CGGGGHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CHHHHHHHHHHHhCchhcCCcCCEEEECcCccC
Confidence            999999999999999999999999999999875

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=100.00  E-value=1.7e-46  Score=331.56  Aligned_cols=257  Identities=33%  Similarity=0.425  Sum_probs=208.9

Q ss_pred             CCCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecC-------------cchhhhHhhhc--CCCCeEEEEecCCC
Q 021960           25 SHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVE-------------DTLGSVLASTL--APAPVTFVHCDVSL   89 (305)
Q Consensus        25 ~~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~-------------~~~~~~~~~~~--~~~~v~~~~~D~~d   89 (305)
                      +..++++|++|||||++|||+++|+.|+++|++|++++|+             ....+...+.+  .+.++.++.+|++|
T Consensus         5 m~~~l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   84 (277)
T 3tsc_A            5 MAGKLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRD   84 (277)
T ss_dssp             --CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTC
T ss_pred             cccccCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCC
Confidence            3457899999999999999999999999999999999883             22222222222  35679999999999


Q ss_pred             HHHHHHHHHHHHHhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-CCEEEEec
Q 021960           90 EEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRG-GGCIISTA  168 (305)
Q Consensus        90 ~~~i~~~~~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~is  168 (305)
                      .++++++++++.+.++++|+||||||....    .++.+.+.++|++.+++|+.+++++++.++|.|.+++ .|+||++|
T Consensus        85 ~~~v~~~~~~~~~~~g~id~lvnnAg~~~~----~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~is  160 (277)
T 3tsc_A           85 FDRLRKVVDDGVAALGRLDIIVANAGVAAP----QAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILIS  160 (277)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCCCCC----CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEEC
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCCCCCC----CChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEc
Confidence            999999999999999999999999998654    5678899999999999999999999999999998876 68999999


Q ss_pred             ccccccCCCCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHH
Q 021960          169 SVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVR  248 (305)
Q Consensus       169 S~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (305)
                      |..+..+.++...|++||+++++|+++++.|++++||+||+|+||+++|+|........     ...... ..+      
T Consensus       161 S~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~-----~~~~~~-~~~------  228 (277)
T 3tsc_A          161 SAAGMKMQPFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTA-----VGQAME-TNP------  228 (277)
T ss_dssp             CGGGTSCCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSHHHHHH-----HHHHHH-TCG------
T ss_pred             cHhhCCCCCCchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccchhhhh-----hhhccc-ccH------
Confidence            99999999999999999999999999999999999999999999999999854311000     000000 000      


Q ss_pred             HHHHHHhhcCCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCcccc
Q 021960          249 KMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTS  299 (305)
Q Consensus       249 ~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~  299 (305)
                      ........ ..+ .++.+|+|+|+.++||+|++++++||++|.+|||++.+
T Consensus       229 ~~~~~~~~-~~p-~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~~  277 (277)
T 3tsc_A          229 QLSHVLTP-FLP-DWVAEPEDIADTVCWLASDESRKVTAAQIPVDQGSTQY  277 (277)
T ss_dssp             GGTTTTCC-SSS-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHHHHhhh-ccC-CCCCCHHHHHHHHHHHhCccccCCcCCEEeeCCCcccC
Confidence            00000001 123 36889999999999999999999999999999998753

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=100.00  E-value=1.7e-46  Score=325.99  Aligned_cols=241  Identities=29%  Similarity=0.483  Sum_probs=209.8

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCc-chhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhcC
Q 021960           29 LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVED-TLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRYG  105 (305)
Q Consensus        29 l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~-~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g  105 (305)
                      +.+|++|||||++|||+++|+.|+++|++|++++++. ...+...+.+  .+.++.++.+|++|.++++++++++.+.++
T Consensus         2 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   81 (246)
T 3osu_A            2 KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFG   81 (246)
T ss_dssp             CCSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4689999999999999999999999999999887743 3333333322  355789999999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhh
Q 021960          106 RLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTAS  185 (305)
Q Consensus       106 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  185 (305)
                      ++|+||||||....    .++.+.+.++|++.+++|+.+++++++.++|.|.+++.++||++||.++..+.++...|++|
T Consensus        82 ~id~lv~nAg~~~~----~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  157 (246)
T 3osu_A           82 SLDVLVNNAGITRD----NLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVAT  157 (246)
T ss_dssp             CCCEEEECCCCCCC----CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHH
T ss_pred             CCCEEEECCCCCCC----CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCCChHHHHH
Confidence            99999999998644    56778899999999999999999999999999998888999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCC
Q 021960          186 KHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL  265 (305)
Q Consensus       186 Kaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (305)
                      |+++++|+++++.|++++||+||+|+||+++|+|.....                   ++..+.+   ..  ..|.+++.
T Consensus       158 K~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~-------------------~~~~~~~---~~--~~p~~r~~  213 (246)
T 3osu_A          158 KAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALS-------------------DELKEQM---LT--QIPLARFG  213 (246)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCSC-------------------HHHHHHH---HT--TCTTCSCB
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCcccccC-------------------HHHHHHH---Hh--cCCCCCCc
Confidence            999999999999999999999999999999999853221                   1111111   11  36788999


Q ss_pred             CHHHHHHHHHHhccCCCCceeccEEEecCCcc
Q 021960          266 RSKDIAEAALYLASDESRYVSGHNLVVDGGVT  297 (305)
Q Consensus       266 ~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~  297 (305)
                      +|+|+|+.++||++++++++||++|.+|||+.
T Consensus       214 ~~~dva~~v~~l~s~~~~~itG~~i~vdgG~~  245 (246)
T 3osu_A          214 QDTDIANTVAFLASDKAKYITGQTIHVNGGMY  245 (246)
T ss_dssp             CHHHHHHHHHHHTSGGGTTCCSCEEEESTTSC
T ss_pred             CHHHHHHHHHHHhCccccCCCCCEEEeCCCcc
Confidence            99999999999999999999999999999975

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=2.5e-46  Score=331.01  Aligned_cols=249  Identities=31%  Similarity=0.467  Sum_probs=208.7

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecC-------------cchhhhHhhhc--CCCCeEEEEecCCCHH
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVE-------------DTLGSVLASTL--APAPVTFVHCDVSLEE   91 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~-------------~~~~~~~~~~~--~~~~v~~~~~D~~d~~   91 (305)
                      .+++||++|||||++|||+++|+.|+++|++|++++|+             ....+...+.+  .+.++.++.+|++|.+
T Consensus        11 ~~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~   90 (280)
T 3pgx_A           11 GSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDA   90 (280)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHH
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHH
Confidence            46889999999999999999999999999999999883             33333333222  3567899999999999


Q ss_pred             HHHHHHHHHHHhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-CCEEEEeccc
Q 021960           92 DIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRG-GGCIISTASV  170 (305)
Q Consensus        92 ~i~~~~~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~  170 (305)
                      +++++++++.+.+|++|+||||||....    .++.+.+.++|++.+++|+.+++++++.++|.|.+++ .|+||++||.
T Consensus        91 ~v~~~~~~~~~~~g~id~lvnnAg~~~~----~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~  166 (280)
T 3pgx_A           91 ALRELVADGMEQFGRLDVVVANAGVLSW----GRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSS  166 (280)
T ss_dssp             HHHHHHHHHHHHHCCCCEEEECCCCCCC----BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCG
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCCC----CCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcch
Confidence            9999999999999999999999998654    5778899999999999999999999999999998875 7899999999


Q ss_pred             ccccCCCCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHH
Q 021960          171 AGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKM  250 (305)
Q Consensus       171 ~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (305)
                      .+..+.++...|++||+++++|+++++.|++++||+||+|+||+++|+|.......                  +.....
T Consensus       167 ~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~------------------~~~~~~  228 (280)
T 3pgx_A          167 AGLKATPGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPEAMM------------------EIFARH  228 (280)
T ss_dssp             GGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCHHHHH------------------HHHHHC
T ss_pred             hhccCCCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccchhhhh------------------hhhhcC
Confidence            99999999999999999999999999999999999999999999999985421000                  000000


Q ss_pred             HHHHh----hcCCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          251 EEFVS----GLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       251 ~~~~~----~~~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      .....    ....+. ++.+|+|+|+.++||++++++++||++|.+|||++.
T Consensus       229 ~~~~~~~~~~~~~~~-r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~~  279 (280)
T 3pgx_A          229 PSFVHSFPPMPVQPN-GFMTADEVADVVAWLAGDGSGTLTGTQIPVDKGALK  279 (280)
T ss_dssp             GGGGGGSCCBTTBCS-SCBCHHHHHHHHHHHHSGGGTTCSSCEEEESTTGGG
T ss_pred             chhhhhhhhcccCCC-CCCCHHHHHHHHHHHhCccccCCCCCEEEECCCccC
Confidence            00000    001233 688999999999999999999999999999999865

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=100.00  E-value=3e-46  Score=329.90  Aligned_cols=243  Identities=33%  Similarity=0.494  Sum_probs=211.8

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      .++++|++|||||++|||+++|+.|+++|++|++++|+....+.+.+.+  .+.++.++.+|++|.++++++++++.+++
T Consensus        28 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~  107 (276)
T 3r1i_A           28 FDLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGEL  107 (276)
T ss_dssp             GCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            3678999999999999999999999999999999999887766555443  34568899999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-CCEEEEecccccccCC--CCCcc
Q 021960          105 GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRG-GGCIISTASVAGVMGG--LGPHA  181 (305)
Q Consensus       105 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~--~~~~~  181 (305)
                      |++|+||||||....    .++.+.+.++|++.+++|+.+++++++.+++.|.+++ +++||++||.++..+.  ++...
T Consensus       108 g~iD~lvnnAg~~~~----~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~~~~~~~~  183 (276)
T 3r1i_A          108 GGIDIAVCNAGIVSV----QAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIPQQVSH  183 (276)
T ss_dssp             SCCSEEEECCCCCCC----CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCCSSCCHH
T ss_pred             CCCCEEEECCCCCCC----CCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccCCCCCcch
Confidence            999999999998654    5678899999999999999999999999999998776 4899999999988764  35788


Q ss_pred             chhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCC
Q 021960          182 YTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLK  261 (305)
Q Consensus       182 Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (305)
                      |++||+++++|+++++.|++++||+||+|+||+++|+|......                       ....+..  ..+.
T Consensus       184 Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~-----------------------~~~~~~~--~~p~  238 (276)
T 3r1i_A          184 YCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPLAD-----------------------YHALWEP--KIPL  238 (276)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGGGG-----------------------GHHHHGG--GSTT
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccchH-----------------------HHHHHHh--cCCC
Confidence            99999999999999999999999999999999999998643210                       0011111  3577


Q ss_pred             CCCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          262 GTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       262 ~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      +++.+|+|+|+.++||+++.++++||++|.+|||++.
T Consensus       239 ~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~~~  275 (276)
T 3r1i_A          239 GRMGRPEELTGLYLYLASAASSYMTGSDIVIDGGYTC  275 (276)
T ss_dssp             SSCBCGGGSHHHHHHHHSGGGTTCCSCEEEESTTTTC
T ss_pred             CCCcCHHHHHHHHHHHcCccccCccCcEEEECcCccC
Confidence            8999999999999999999999999999999999864

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=100.00  E-value=2.4e-46  Score=326.34  Aligned_cols=239  Identities=27%  Similarity=0.393  Sum_probs=208.2

Q ss_pred             CCCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc---CCCCeEEEEecC--CCHHHHHHHHHH
Q 021960           25 SHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL---APAPVTFVHCDV--SLEEDIENLINS   99 (305)
Q Consensus        25 ~~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~---~~~~v~~~~~D~--~d~~~i~~~~~~   99 (305)
                      ....+++|++|||||++|||+++|+.|+++|++|++++|+....+...+.+   .+.++.++.+|+  +|.+++++++++
T Consensus         6 ~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   85 (252)
T 3f1l_A            6 KQDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQR   85 (252)
T ss_dssp             CTTTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHH
T ss_pred             cccccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHH
Confidence            345689999999999999999999999999999999999877665544433   233688899999  999999999999


Q ss_pred             HHHhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCC
Q 021960          100 TVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGP  179 (305)
Q Consensus       100 ~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~  179 (305)
                      +.+.++++|+||||||.....   .++.+.+.++|++.+++|+.+++++++.++|.|.+++.|+||++||..+..+.++.
T Consensus        86 ~~~~~g~id~lv~nAg~~~~~---~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~  162 (252)
T 3f1l_A           86 IAVNYPRLDGVLHNAGLLGDV---CPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANW  162 (252)
T ss_dssp             HHHHCSCCSEEEECCCCCCCC---SCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTSCCTTC
T ss_pred             HHHhCCCCCEEEECCccCCCC---CCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhccCCCCC
Confidence            999999999999999975432   56778899999999999999999999999999999889999999999999999999


Q ss_pred             ccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCC
Q 021960          180 HAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGN  259 (305)
Q Consensus       180 ~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (305)
                      ..|++||+++++|+++++.|+++. |+||+|+||+++|+|.....+.                                .
T Consensus       163 ~~Y~asK~a~~~l~~~la~e~~~~-irvn~v~PG~v~t~~~~~~~~~--------------------------------~  209 (252)
T 3f1l_A          163 GAYAASKFATEGMMQVLADEYQQR-LRVNCINPGGTRTAMRASAFPT--------------------------------E  209 (252)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTT-CEEEEEECCSBSSHHHHHHCTT--------------------------------C
T ss_pred             chhHHHHHHHHHHHHHHHHHhcCC-cEEEEEecCcccCchhhhhCCc--------------------------------c
Confidence            999999999999999999999877 9999999999999986543222                                1


Q ss_pred             CCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCcccc
Q 021960          260 LKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTS  299 (305)
Q Consensus       260 ~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~  299 (305)
                      +..++.+|+|+|+.++||+++.++++||++|.+|||....
T Consensus       210 ~~~~~~~p~dva~~~~~L~s~~~~~itG~~i~vdgG~~~~  249 (252)
T 3f1l_A          210 DPQKLKTPADIMPLYLWLMGDDSRRKTGMTFDAQPGRKPG  249 (252)
T ss_dssp             CGGGSBCTGGGHHHHHHHHSGGGTTCCSCEEESSCC----
T ss_pred             chhccCCHHHHHHHHHHHcCccccCCCCCEEEeCCCcCCC
Confidence            1234668999999999999999999999999999998654

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=100.00  E-value=2.3e-46  Score=329.13  Aligned_cols=258  Identities=24%  Similarity=0.322  Sum_probs=213.8

Q ss_pred             CCCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc----CCCCeEEEEecCCCHHHHHHHHHHH
Q 021960           25 SHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL----APAPVTFVHCDVSLEEDIENLINST  100 (305)
Q Consensus        25 ~~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~----~~~~v~~~~~D~~d~~~i~~~~~~~  100 (305)
                      +.+++++|++|||||++|||+++|+.|+++|++|++++|+....+...+.+    .+..+..+.+|++|.++++++++  
T Consensus         4 m~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~--   81 (267)
T 3t4x_A            4 MHMQLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIE--   81 (267)
T ss_dssp             CCCCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHH--
T ss_pred             cccccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHH--
Confidence            456789999999999999999999999999999999999876655443333    24568889999999998887654  


Q ss_pred             HHhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCc
Q 021960          101 VSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPH  180 (305)
Q Consensus       101 ~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~  180 (305)
                        +++++|+||||||....    .++.+.+.++|++.+++|+.+++++++.++|.|.+++.|+||++||..+..+.++..
T Consensus        82 --~~g~id~lv~nAg~~~~----~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  155 (267)
T 3t4x_A           82 --KYPKVDILINNLGIFEP----VEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIMPSQEMA  155 (267)
T ss_dssp             --HCCCCSEEEECCCCCCC----CCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTSCCTTCH
T ss_pred             --hcCCCCEEEECCCCCCC----CccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhccCCCcch
Confidence              56899999999998654    567889999999999999999999999999999988889999999999999999999


Q ss_pred             cchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCC
Q 021960          181 AYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNL  260 (305)
Q Consensus       181 ~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (305)
                      .|++||+++++|+++++.|++++||+||+|+||+++|++....+.....        ....+.++..+...... ....+
T Consensus       156 ~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~-~~~~~  226 (267)
T 3t4x_A          156 HYSATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVETMLNSLYP--------NEQLTIEEAEKRFMKEN-RPTSI  226 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHHHHHHHHSST--------TSCCCHHHHHHHHHHHH-CTTCS
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCccHHHHHhhcCc--------ccCCCHHHHHHHHhhcc-CCccc
Confidence            9999999999999999999999999999999999999986654322110        01112222222221111 11246


Q ss_pred             CCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCcccc
Q 021960          261 KGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTS  299 (305)
Q Consensus       261 ~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~  299 (305)
                      .+++++|||+|+.++||+|+.++++||++|.+|||++.+
T Consensus       227 ~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~~~s  265 (267)
T 3t4x_A          227 IQRLIRPEEIAHLVTFLSSPLSSAINGSALRIDGGLVRS  265 (267)
T ss_dssp             SCSCBCTHHHHHHHHHHHSGGGTTCCSCEEEESTTCSCS
T ss_pred             ccCccCHHHHHHHHHHHcCccccCccCCeEEECCCcccc
Confidence            789999999999999999999999999999999998764

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.9e-46  Score=327.77  Aligned_cols=247  Identities=29%  Similarity=0.384  Sum_probs=199.3

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCC
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGR  106 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~  106 (305)
                      +++++|++|||||++|||+++|+.|+++|++|++++|+....+...+.+ +.++.++.+|++|.++++++++++.+.+|+
T Consensus         3 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   81 (257)
T 3tpc_A            3 MQLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAEL-GAAVRFRNADVTNEADATAALAFAKQEFGH   81 (257)
T ss_dssp             -CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC-------------CEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh-CCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            4678999999999999999999999999999999999887665554444 346889999999999999999999999999


Q ss_pred             ccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC------CCCEEEEecccccccCCCCCc
Q 021960          107 LDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINR------GGGCIISTASVAGVMGGLGPH  180 (305)
Q Consensus       107 id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~------~~~~iv~isS~~~~~~~~~~~  180 (305)
                      +|+||||||............+.+.++|++.+++|+.+++++++.++|.|.++      +.|+||++||.++..+.++..
T Consensus        82 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  161 (257)
T 3tpc_A           82 VHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQIGQA  161 (257)
T ss_dssp             CCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCTTCH
T ss_pred             CCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccCCCCCc
Confidence            99999999987543211223367899999999999999999999999999874      578999999999999999999


Q ss_pred             cchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCC
Q 021960          181 AYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNL  260 (305)
Q Consensus       181 ~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (305)
                      .|++||+++++|+++++.|++++||+||+|+||+++|++.....+.                   .    ...... ..+
T Consensus       162 ~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~-------------------~----~~~~~~-~~p  217 (257)
T 3tpc_A          162 AYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAGMPQD-------------------V----QDALAA-SVP  217 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC-------------------------------------C-CSS
T ss_pred             chHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhccCCHH-------------------H----HHHHHh-cCC
Confidence            9999999999999999999999999999999999999986432111                   0    000111 245


Q ss_pred             C-CCCCCHHHHHHHHHHhccCCCCceeccEEEecCCccccc
Q 021960          261 K-GTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTSR  300 (305)
Q Consensus       261 ~-~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~~  300 (305)
                      . +++.+|+|+|+.++||+++  +++||++|.+|||+++..
T Consensus       218 ~~~r~~~~~dva~~v~~l~s~--~~itG~~i~vdGG~~~~~  256 (257)
T 3tpc_A          218 FPPRLGRAEEYAALVKHICEN--TMLNGEVIRLDGALRMAP  256 (257)
T ss_dssp             SSCSCBCHHHHHHHHHHHHHC--TTCCSCEEEESTTCCC--
T ss_pred             CCCCCCCHHHHHHHHHHHccc--CCcCCcEEEECCCccCCC
Confidence            5 7899999999999999986  689999999999987653

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.2e-46  Score=333.21  Aligned_cols=250  Identities=24%  Similarity=0.334  Sum_probs=195.0

Q ss_pred             CCCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEec-CcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHH
Q 021960           25 SHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADV-EDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTV  101 (305)
Q Consensus        25 ~~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r-~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~  101 (305)
                      +...+++|++|||||++|||+++|+.|+++|++|++++| +....+...+.+  .+.++.++.+|++|.++++++++++.
T Consensus        23 mm~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~  102 (280)
T 4da9_A           23 MMTQKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVV  102 (280)
T ss_dssp             CCSCCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHH
T ss_pred             hhhccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHH
Confidence            344678999999999999999999999999999999986 444333333332  35679999999999999999999999


Q ss_pred             HhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC---CCEEEEecccccccCCCC
Q 021960          102 SRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRG---GGCIISTASVAGVMGGLG  178 (305)
Q Consensus       102 ~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~---~~~iv~isS~~~~~~~~~  178 (305)
                      +.+|++|+||||||.....  ..++.+.+.++|++.+++|+.+++++++.++|.|.+++   .++||++||..+..+.++
T Consensus       103 ~~~g~iD~lvnnAg~~~~~--~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~  180 (280)
T 4da9_A          103 AEFGRIDCLVNNAGIASIV--RDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTSPE  180 (280)
T ss_dssp             HHHSCCCEEEEECC--------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC-------C
T ss_pred             HHcCCCCEEEECCCccccC--CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccCCCC
Confidence            9999999999999984221  25788899999999999999999999999999998765   689999999999999999


Q ss_pred             CccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcC
Q 021960          179 PHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLG  258 (305)
Q Consensus       179 ~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (305)
                      ...|+++|+++++|+++++.|++++||+||+|+||+++|++.....+.                   ..+..    ....
T Consensus       181 ~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~-------------------~~~~~----~~~~  237 (280)
T 4da9_A          181 RLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAVSGK-------------------YDGLI----ESGL  237 (280)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC-----------------------------------------
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhcchh-------------------HHHHH----hhcC
Confidence            999999999999999999999999999999999999999986543211                   00000    0102


Q ss_pred             CCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCcccc
Q 021960          259 NLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTS  299 (305)
Q Consensus       259 ~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~  299 (305)
                      .|.+++.+|+|+|+.++||+++.++++||++|.+|||+++.
T Consensus       238 ~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~~  278 (280)
T 4da9_A          238 VPMRRWGEPEDIGNIVAGLAGGQFGFATGSVIQADGGLSIG  278 (280)
T ss_dssp             ----CCBCHHHHHHHHHHHHTSTTGGGTTCEEEESTTCC--
T ss_pred             CCcCCcCCHHHHHHHHHHHhCccccCCCCCEEEECCCcccC
Confidence            56788999999999999999999999999999999998764

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=100.00  E-value=3.8e-46  Score=326.31  Aligned_cols=253  Identities=31%  Similarity=0.442  Sum_probs=205.8

Q ss_pred             CCCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           25 SHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        25 ~~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      ..+++++|++|||||++|||+++|++|+++|++|++++|+....+.+.+.+ +.++.++.+|++|.++++++++++.+.+
T Consensus         3 ~~m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (261)
T 3n74_A            3 GSMSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI-GDAALAVAADISKEADVDAAVEAALSKF   81 (261)
T ss_dssp             --CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-CTTEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CcccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-CCceEEEEecCCCHHHHHHHHHHHHHhc
Confidence            345788999999999999999999999999999999999987776665555 4468999999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC----CCEEEEecccccccCCCCCc
Q 021960          105 GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRG----GGCIISTASVAGVMGGLGPH  180 (305)
Q Consensus       105 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~----~~~iv~isS~~~~~~~~~~~  180 (305)
                      +++|+||||||.....   ..+.+.+.++|++.+++|+.+++++++.+++.|.+++    .++||++||..+..+.++..
T Consensus        82 g~id~li~~Ag~~~~~---~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~  158 (261)
T 3n74_A           82 GKVDILVNNAGIGHKP---QNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPRPNLA  158 (261)
T ss_dssp             SCCCEEEECCCCCCCS---CCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSCCTTCH
T ss_pred             CCCCEEEECCccCCCC---CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCCCCCcc
Confidence            9999999999986432   5677789999999999999999999999999998754    67899999999999999999


Q ss_pred             cchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCC
Q 021960          181 AYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNL  260 (305)
Q Consensus       181 ~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (305)
                      .|+++|+++++|+++++.|++++||+|++|+||+++|++....+....               ++..+.+   ..  ..+
T Consensus       159 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~---------------~~~~~~~---~~--~~~  218 (261)
T 3n74_A          159 WYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFMGEDS---------------EEIRKKF---RD--SIP  218 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC---------------------------------------------CT
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhcccCc---------------HHHHHHH---hh--cCC
Confidence            999999999999999999999999999999999999998665432200               0111111   11  357


Q ss_pred             CCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCcccccc
Q 021960          261 KGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTSRN  301 (305)
Q Consensus       261 ~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~~~  301 (305)
                      .+++.+|+|+|+.++||++++++++||++|.+|||+++..+
T Consensus       219 ~~~~~~~~dva~~~~~l~s~~~~~itG~~i~vdgG~~~~~~  259 (261)
T 3n74_A          219 MGRLLKPDDLAEAAAFLCSPQASMITGVALDVDGGRSIGGR  259 (261)
T ss_dssp             TSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTTC---
T ss_pred             cCCCcCHHHHHHHHHHHcCCcccCcCCcEEEecCCcccCCC
Confidence            78999999999999999999999999999999999987643

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.4e-46  Score=329.07  Aligned_cols=240  Identities=28%  Similarity=0.365  Sum_probs=199.8

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEec-CcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADV-EDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r-~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      .+++|++|||||++|||+++|+.|+++|++|+++++ +....+.+.+.+  .+.++.++.+|++|.++++++++++.+.+
T Consensus        24 ~~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  103 (267)
T 3u5t_A           24 METNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAF  103 (267)
T ss_dssp             ---CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            457999999999999999999999999999998744 444444333332  35578999999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchh
Q 021960          105 GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTA  184 (305)
Q Consensus       105 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~  184 (305)
                      +++|+||||||....    .++.+.+.++|++.+++|+.+++++++.++|.|.+  .|+||++||..+..+.++...|++
T Consensus       104 g~iD~lvnnAG~~~~----~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~a  177 (267)
T 3u5t_A          104 GGVDVLVNNAGIMPL----TTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRV--GGRIINMSTSQVGLLHPSYGIYAA  177 (267)
T ss_dssp             SCEEEEEECCCCCCC----CCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCTHHHHCCTTCHHHHH
T ss_pred             CCCCEEEECCCCCCC----CChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh--CCeEEEEeChhhccCCCCchHHHH
Confidence            999999999998643    57888999999999999999999999999999954  589999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCC
Q 021960          185 SKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT  264 (305)
Q Consensus       185 sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (305)
                      ||+++++|+++++.|++++||+||+|+||+++|+|.......                  +..+.+   ..  ..|.+++
T Consensus       178 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~------------------~~~~~~---~~--~~p~~r~  234 (267)
T 3u5t_A          178 AKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLEGKSD------------------EVRDRF---AK--LAPLERL  234 (267)
T ss_dssp             HHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC-----------------------------CHHHH---HT--SSTTCSC
T ss_pred             HHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCccccccCCH------------------HHHHHH---Hh--cCCCCCC
Confidence            999999999999999999999999999999999985432111                  111111   11  3678899


Q ss_pred             CCHHHHHHHHHHhccCCCCceeccEEEecCCc
Q 021960          265 LRSKDIAEAALYLASDESRYVSGHNLVVDGGV  296 (305)
Q Consensus       265 ~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~  296 (305)
                      .+|+|+|+.++||+++.++++||++|.+|||+
T Consensus       235 ~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~  266 (267)
T 3u5t_A          235 GTPQDIAGAVAFLAGPDGAWVNGQVLRANGGI  266 (267)
T ss_dssp             BCHHHHHHHHHHHHSTTTTTCCSEEEEESSSC
T ss_pred             cCHHHHHHHHHHHhCccccCccCCEEEeCCCc
Confidence            99999999999999999999999999999996

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=5.9e-46  Score=334.33  Aligned_cols=261  Identities=28%  Similarity=0.435  Sum_probs=210.2

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCc------------chhhhHhhhc--CCCCeEEEEecCCCHH
Q 021960           26 HRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVED------------TLGSVLASTL--APAPVTFVHCDVSLEE   91 (305)
Q Consensus        26 ~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~------------~~~~~~~~~~--~~~~v~~~~~D~~d~~   91 (305)
                      ..+++||++|||||++|||+++|+.|+++|++|++++|+.            ...+...+.+  .+.++.++.+|++|.+
T Consensus        41 m~~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~  120 (317)
T 3oec_A           41 MNRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLA  120 (317)
T ss_dssp             -CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHH
T ss_pred             hhccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHH
Confidence            3468899999999999999999999999999999998752            2222222211  3567999999999999


Q ss_pred             HHHHHHHHHHHhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-CCEEEEeccc
Q 021960           92 DIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRG-GGCIISTASV  170 (305)
Q Consensus        92 ~i~~~~~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~  170 (305)
                      +++++++++.+.+|+||+||||||....    .++.+.+.++|++.+++|+.+++++++.++|.|.+++ .|+||++||.
T Consensus       121 ~v~~~~~~~~~~~g~iD~lVnnAg~~~~----~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~  196 (317)
T 3oec_A          121 SLQAVVDEALAEFGHIDILVSNVGISNQ----GEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSST  196 (317)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCCC----BCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCG
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCCC----CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcH
Confidence            9999999999999999999999998654    5678899999999999999999999999999998775 6899999999


Q ss_pred             ccccCCCCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHH
Q 021960          171 AGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKM  250 (305)
Q Consensus       171 ~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (305)
                      .+..+.++...|++||+++++|+++++.|++++||+||+|+||+++|+|.......      .........+..+.....
T Consensus       197 ~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~------~~~~~~~~~~~~~~~~~~  270 (317)
T 3oec_A          197 VGLRGAPGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLL------KMFLPHLENPTREDAAEL  270 (317)
T ss_dssp             GGSSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHCHHHH------HHHCTTCSSCCHHHHHHH
T ss_pred             HhcCCCCCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccchhhh------hhhhhhccccchhHHHHH
Confidence            99999999999999999999999999999999999999999999999985421000      000000001111111111


Q ss_pred             HHHHhhcCCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCcccc
Q 021960          251 EEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTS  299 (305)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~  299 (305)
                      .  ......+ +++.+|+|||+.++||+|++++|+||++|.+|||++..
T Consensus       271 ~--~~~~~~p-~~~~~pedvA~av~fL~s~~a~~itG~~i~vdGG~~~~  316 (317)
T 3oec_A          271 F--SQLTLLP-IPWVEPEDVSNAVAWLASDEARYIHGAAIPVDGGQLAR  316 (317)
T ss_dssp             H--TTTCSSS-SSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGGC
T ss_pred             H--hhhccCC-CCCCCHHHHHHHHHHHcCCcccCCCCCEEEECcchhhc
Confidence            1  1111223 67889999999999999999999999999999998753

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=100.00  E-value=6.7e-46  Score=326.53  Aligned_cols=253  Identities=34%  Similarity=0.488  Sum_probs=211.4

Q ss_pred             CCCCCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHH
Q 021960           23 PPSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVS  102 (305)
Q Consensus        23 ~~~~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~  102 (305)
                      ++...++++|++|||||++|||+++|+.|+++|++|++++|+.....        ..+..+.+|++|.++++++++++.+
T Consensus         6 ~~~~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~--------~~~~~~~~Dv~~~~~v~~~~~~~~~   77 (269)
T 3vtz_A            6 HHHMEEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDV--------NVSDHFKIDVTNEEEVKEAVEKTTK   77 (269)
T ss_dssp             ----CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--CT--------TSSEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhcc--------CceeEEEecCCCHHHHHHHHHHHHH
Confidence            33455788999999999999999999999999999999999865431        2467889999999999999999999


Q ss_pred             hcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccc
Q 021960          103 RYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAY  182 (305)
Q Consensus       103 ~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y  182 (305)
                      .+|++|+||||||....    .++.+.+.++|++.+++|+.+++++++.++|.|.+++.|+||++||..+..+.++...|
T Consensus        78 ~~g~iD~lv~nAg~~~~----~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  153 (269)
T 3vtz_A           78 KYGRIDILVNNAGIEQY----SPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAATKNAAAY  153 (269)
T ss_dssp             HHSCCCEEEECCCCCCC----CCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTTCHHH
T ss_pred             HcCCCCEEEECCCcCCC----CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCCChhH
Confidence            99999999999998643    56788899999999999999999999999999998888999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCC
Q 021960          183 TASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKG  262 (305)
Q Consensus       183 ~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (305)
                      ++||+++++|+++++.|+++ +|+||+|+||+++|+|.........           ........+....+..  ..+.+
T Consensus       154 ~asKaa~~~l~~~la~e~~~-~i~vn~v~PG~v~T~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~--~~p~~  219 (269)
T 3vtz_A          154 VTSKHALLGLTRSVAIDYAP-KIRCNAVCPGTIMTPMVIKAAKMEV-----------GEDENAVERKIEEWGR--QHPMG  219 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHHTT-TEEEEEEEECSBCCHHHHHHHHHHH-----------CCSTTHHHHHHHHHHH--HSTTS
T ss_pred             HHHHHHHHHHHHHHHHHhcC-CCEEEEEEECCCcCcchhhhhhccc-----------cccchhhHHHHHHHHh--cCCCC
Confidence            99999999999999999988 8999999999999998654321100           0000001111222222  26788


Q ss_pred             CCCCHHHHHHHHHHhccCCCCceeccEEEecCCcccccc
Q 021960          263 TTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTSRN  301 (305)
Q Consensus       263 ~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~~~  301 (305)
                      ++.+|+|+|+.++||+++.++++||++|.+|||++...+
T Consensus       220 r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~~~~  258 (269)
T 3vtz_A          220 RIGRPEEVAEVVAFLASDRSSFITGACLTVDGGLLSKLP  258 (269)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGBCC
T ss_pred             CCcCHHHHHHHHHHHhCCccCCCcCcEEEECCCccccCC
Confidence            999999999999999999999999999999999876544

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=100.00  E-value=2.2e-46  Score=329.06  Aligned_cols=243  Identities=31%  Similarity=0.451  Sum_probs=209.1

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcC
Q 021960           26 HRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYG  105 (305)
Q Consensus        26 ~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g  105 (305)
                      ..++++|++|||||++|||+++|+.|+++|++|++++|+......         ...+.+|++|.++++++++++.+.++
T Consensus        23 m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~---------~~~~~~Dv~~~~~~~~~~~~~~~~~g   93 (266)
T 3uxy_A           23 MQGFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAA---------DLHLPGDLREAAYADGLPGAVAAGLG   93 (266)
T ss_dssp             ---CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSCC---------SEECCCCTTSHHHHHHHHHHHHHHHS
T ss_pred             hhCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHh---------hhccCcCCCCHHHHHHHHHHHHHhcC
Confidence            347889999999999999999999999999999999997654321         23457999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhh
Q 021960          106 RLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTAS  185 (305)
Q Consensus       106 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  185 (305)
                      ++|+||||||....    .++.+.+.++|++.+++|+.+++++++.++|.|.+++.|+||++||..+..+.++...|++|
T Consensus        94 ~iD~lvnnAg~~~~----~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~as  169 (266)
T 3uxy_A           94 RLDIVVNNAGVISR----GRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLRPGPGHALYCLT  169 (266)
T ss_dssp             CCCEEEECCCCCCC----BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTBCCTTBHHHHHH
T ss_pred             CCCEEEECCCCCCC----CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCCChHHHHH
Confidence            99999999998754    56788999999999999999999999999999998889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCC
Q 021960          186 KHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL  265 (305)
Q Consensus       186 Kaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (305)
                      |+++++|+++++.|++++||+||+|+||+++|+|....+...            ....++..+.+   ..  ..+.+++.
T Consensus       170 Kaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~------------~~~~~~~~~~~---~~--~~p~~r~~  232 (266)
T 3uxy_A          170 KAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFAKR------------GFDPDRAVAEL---GR--TVPLGRIA  232 (266)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHHHHT------------TCCHHHHHHHH---HT--TSTTSSCB
T ss_pred             HHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhhhcc------------cccchHHHHHH---Hh--cCCCCCCc
Confidence            999999999999999999999999999999999965543221            11111222222   11  36788999


Q ss_pred             CHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          266 RSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       266 ~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      +|+|+|+.++||+++.++++||++|.+|||.++
T Consensus       233 ~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~  265 (266)
T 3uxy_A          233 EPEDIADVVLFLASDAARYLCGSLVEVNGGKAV  265 (266)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTCCC
T ss_pred             CHHHHHHHHHHHhCchhcCCcCCEEEECcCEeC
Confidence            999999999999999999999999999999875

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=100.00  E-value=1e-45  Score=325.46  Aligned_cols=255  Identities=27%  Similarity=0.390  Sum_probs=210.5

Q ss_pred             CCCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCc-chhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHH
Q 021960           25 SHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVED-TLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTV  101 (305)
Q Consensus        25 ~~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~-~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~  101 (305)
                      +..++++|++|||||++|||+++|+.|+++|++|++++++. ...+...+.+  .+.++.++.+|++|.++++++++++.
T Consensus        12 ~~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   91 (270)
T 3is3_A           12 IPGRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAV   91 (270)
T ss_dssp             CTTCCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence            34578999999999999999999999999999999977653 3333333322  35679999999999999999999999


Q ss_pred             HhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccc-cccCCCCCc
Q 021960          102 SRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVA-GVMGGLGPH  180 (305)
Q Consensus       102 ~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~-~~~~~~~~~  180 (305)
                      +.++++|+||||||....    .++.+.+.++|++.+++|+.+++++++.++|.|.+  .|+||++||.. +..+.++..
T Consensus        92 ~~~g~id~lvnnAg~~~~----~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~  165 (270)
T 3is3_A           92 AHFGHLDIAVSNSGVVSF----GHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTE--GGRIVLTSSNTSKDFSVPKHS  165 (270)
T ss_dssp             HHHSCCCEEECCCCCCCC----CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT--TCEEEEECCTTTTTCCCTTCH
T ss_pred             HHcCCCCEEEECCCCCCC----CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc--CCeEEEEeCchhccCCCCCCc
Confidence            999999999999998643    57888999999999999999999999999999954  68999999988 567888999


Q ss_pred             cchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCC
Q 021960          181 AYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNL  260 (305)
Q Consensus       181 ~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (305)
                      .|++||+++++|+++++.|++++||+||+|+||+++|+|..+.........       .....++..+....     ..|
T Consensus       166 ~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~-----~~p  233 (270)
T 3is3_A          166 LYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNG-------TSYTAEQRQQMAAH-----ASP  233 (270)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTG-------GGSCHHHHHHHHHH-----HST
T ss_pred             hhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhccccc-------cccchHHHHHHHHh-----cCC
Confidence            999999999999999999999999999999999999999764322110000       00111111111111     267


Q ss_pred             CCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCcc
Q 021960          261 KGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT  297 (305)
Q Consensus       261 ~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~  297 (305)
                      .+++.+|+|+|+.++||+|++++++||++|.+|||++
T Consensus       234 ~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~  270 (270)
T 3is3_A          234 LHRNGWPQDVANVVGFLVSKEGEWVNGKVLTLDGGAA  270 (270)
T ss_dssp             TCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTCC
T ss_pred             CCCCCCHHHHHHHHHHHcCCccCCccCcEEEeCCCCC
Confidence            8999999999999999999999999999999999974

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=100.00  E-value=8.6e-46  Score=329.43  Aligned_cols=245  Identities=30%  Similarity=0.432  Sum_probs=210.6

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchh-hhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHh
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLG-SVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSR  103 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~-~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~  103 (305)
                      .+++||++|||||++|||+++|+.|+++|++|++++|+.... +...+..  .+.++.++.+|++|.++++++++++.++
T Consensus        43 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  122 (291)
T 3ijr_A           43 EKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQ  122 (291)
T ss_dssp             STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            367899999999999999999999999999999999986532 2222221  3457899999999999999999999999


Q ss_pred             cCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccch
Q 021960          104 YGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYT  183 (305)
Q Consensus       104 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~  183 (305)
                      ++++|+||||||.....   .++.+.+.++|++.+++|+.+++++++.+++.|.  ..++||++||..+..+.++...|+
T Consensus       123 ~g~iD~lvnnAg~~~~~---~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~--~~g~iv~isS~~~~~~~~~~~~Y~  197 (291)
T 3ijr_A          123 LGSLNILVNNVAQQYPQ---QGLEYITAEQLEKTFRINIFSYFHVTKAALSHLK--QGDVIINTASIVAYEGNETLIDYS  197 (291)
T ss_dssp             HSSCCEEEECCCCCCCC---SSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCC--TTCEEEEECCTHHHHCCTTCHHHH
T ss_pred             cCCCCEEEECCCCcCCC---CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHh--hCCEEEEEechHhcCCCCCChhHH
Confidence            99999999999976432   5677889999999999999999999999999884  367999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCC
Q 021960          184 ASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGT  263 (305)
Q Consensus       184 ~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (305)
                      ++|+++++|+++++.|++++||+||+|+||+++|+|....+..                  +..+   .+..  ..+.++
T Consensus       198 asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~------------------~~~~---~~~~--~~p~~r  254 (291)
T 3ijr_A          198 ATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSFDE------------------KKVS---QFGS--NVPMQR  254 (291)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHHHSCH------------------HHHH---HTTT--TSTTSS
T ss_pred             HHHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCcccccCCH------------------HHHH---HHHc--cCCCCC
Confidence            9999999999999999999999999999999999986543211                  1111   1111  367889


Q ss_pred             CCCHHHHHHHHHHhccCCCCceeccEEEecCCcccc
Q 021960          264 TLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTS  299 (305)
Q Consensus       264 ~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~  299 (305)
                      +.+|+|+|+.++||+++.++++||++|.+|||+++.
T Consensus       255 ~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~~~  290 (291)
T 3ijr_A          255 PGQPYELAPAYVYLASSDSSYVTGQMIHVNGGVIVN  290 (291)
T ss_dssp             CBCGGGTHHHHHHHHSGGGTTCCSCEEEESSSCCCC
T ss_pred             CcCHHHHHHHHHHHhCCccCCCcCCEEEECCCcccC
Confidence            999999999999999999999999999999998753

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=100.00  E-value=5.3e-46  Score=328.21  Aligned_cols=245  Identities=23%  Similarity=0.307  Sum_probs=212.8

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      .+++||++|||||++|||+++|+.|+++|++|++++|+....+...+.+  .+.++.++.+|++|.++++++++++.+. 
T Consensus        29 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~-  107 (275)
T 4imr_A           29 FGLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAI-  107 (275)
T ss_dssp             HCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHH-
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHh-
Confidence            4678999999999999999999999999999999999877765554443  3567999999999999999999999887 


Q ss_pred             CCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchh
Q 021960          105 GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTA  184 (305)
Q Consensus       105 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~  184 (305)
                      +++|+||||||....    .++.+.+.++|++.+++|+.+++++++.++|.|.+++.|+||++||..+..+.+....|++
T Consensus       108 g~iD~lvnnAg~~~~----~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~a  183 (275)
T 4imr_A          108 APVDILVINASAQIN----ATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLRPKSVVTAYAA  183 (275)
T ss_dssp             SCCCEEEECCCCCCC----BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHH
T ss_pred             CCCCEEEECCCCCCC----CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCCchhhHH
Confidence            899999999998644    5678899999999999999999999999999999888899999999999998888888999


Q ss_pred             hHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCC
Q 021960          185 SKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT  264 (305)
Q Consensus       185 sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (305)
                      ||+++++|+++++.|++++||+||+|+||+++|+|.......                ..+..+.   +... ..+.+++
T Consensus       184 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~----------------~~~~~~~---~~~~-~~p~~r~  243 (275)
T 4imr_A          184 TKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNADRRAQ----------------DPEGWDE---YVRT-LNWMGRA  243 (275)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHHHHH----------------CHHHHHH---HHHH-HSTTCSC
T ss_pred             HHHHHHHHHHHHHHHhcccCcEEEEEEeccccCccccccccc----------------ChHHHHH---HHhh-cCccCCC
Confidence            999999999999999999999999999999999986543211                0111111   1111 1367899


Q ss_pred             CCHHHHHHHHHHhccCCCCceeccEEEecCCc
Q 021960          265 LRSKDIAEAALYLASDESRYVSGHNLVVDGGV  296 (305)
Q Consensus       265 ~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~  296 (305)
                      .+|+|+|+.++||++++++++||++|.+|||+
T Consensus       244 ~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~  275 (275)
T 4imr_A          244 GRPEEMVGAALFLASEACSFMTGETIFLTGGY  275 (275)
T ss_dssp             BCGGGGHHHHHHHHSGGGTTCCSCEEEESSCC
T ss_pred             cCHHHHHHHHHHHcCcccCCCCCCEEEeCCCC
Confidence            99999999999999999999999999999995

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=100.00  E-value=1.2e-45  Score=320.69  Aligned_cols=243  Identities=30%  Similarity=0.421  Sum_probs=214.8

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhcC
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRYG  105 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g  105 (305)
                      ++++|++|||||++|||+++++.|+++|++|++++|+....+.+.+.+  .+.++.++.+|++|.++++++++++.+.++
T Consensus         2 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (247)
T 3lyl_A            2 SLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENL   81 (247)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTC
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            578999999999999999999999999999999999877665554443  345799999999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhh
Q 021960          106 RLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTAS  185 (305)
Q Consensus       106 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  185 (305)
                      ++|+||||||....    .++.+.+.++|++.+++|+.+++++++.++|.|.+++.++||++||..+..+.++...|+++
T Consensus        82 ~id~li~~Ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  157 (247)
T 3lyl_A           82 AIDILVNNAGITRD----NLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGNPGQTNYCAA  157 (247)
T ss_dssp             CCSEEEECCCCCCC----CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHH
T ss_pred             CCCEEEECCCCCCC----CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCCcHHHHHH
Confidence            99999999998654    56778899999999999999999999999999998888999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCC
Q 021960          186 KHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL  265 (305)
Q Consensus       186 Kaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (305)
                      |+++++|+++++.|++++||+|++|+||+++|++.....                   .+..+..    .. ..+.+++.
T Consensus       158 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-------------------~~~~~~~----~~-~~~~~~~~  213 (247)
T 3lyl_A          158 KAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDKLT-------------------DEQKSFI----AT-KIPSGQIG  213 (247)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTSC-------------------HHHHHHH----HT-TSTTCCCB
T ss_pred             HHHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchhcc-------------------HHHHHHH----hh-cCCCCCCc
Confidence            999999999999999999999999999999999854321                   1111111    11 35778899


Q ss_pred             CHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          266 RSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       266 ~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      +|+|+|+.++||++++.+++||++|.+|||+++
T Consensus       214 ~~~dva~~i~~l~s~~~~~~tG~~i~vdgG~~~  246 (247)
T 3lyl_A          214 EPKDIAAAVAFLASEEAKYITGQTLHVNGGMYM  246 (247)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTSSC
T ss_pred             CHHHHHHHHHHHhCCCcCCccCCEEEECCCEec
Confidence            999999999999999999999999999999875

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=100.00  E-value=2.2e-45  Score=324.98  Aligned_cols=257  Identities=18%  Similarity=0.224  Sum_probs=210.5

Q ss_pred             ccCCCCCCCCCCCCEEEEecCC--CchHHHHHHHHHHcCCeEEEEecCc--chhhhHhhhcCCCCeEEEEecCCCHHHHH
Q 021960           19 WDDAPPSHRRLEGKVAIITGGA--RGIGEAAVRLFARHGAKVVIADVED--TLGSVLASTLAPAPVTFVHCDVSLEEDIE   94 (305)
Q Consensus        19 ~~~~~~~~~~l~~k~vlVtGas--~giG~~ia~~l~~~g~~vv~~~r~~--~~~~~~~~~~~~~~v~~~~~D~~d~~~i~   94 (305)
                      ....++.+.++++|++|||||+  +|||+++|+.|+++|++|++++|+.  ...+.+.+..  .++.++.+|++|.++++
T Consensus        14 ~~~~~~~M~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~v~   91 (280)
T 3nrc_A           14 LVPRGSHMGFLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCAEF--NPAAVLPCDVISDQEIK   91 (280)
T ss_dssp             --------CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHGGG--CCSEEEECCTTCHHHHH
T ss_pred             CCCCCCcccccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCchHHHHHHHHHHhc--CCceEEEeecCCHHHHH
Confidence            3334444557899999999998  7799999999999999999999987  2233332222  34889999999999999


Q ss_pred             HHHHHHHHhcCCccEEEEcCCCCCCCCCCCcccC-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccc
Q 021960           95 NLINSTVSRYGRLDILYNNAGVLGNQRKHKSIID-FDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGV  173 (305)
Q Consensus        95 ~~~~~~~~~~g~id~li~nag~~~~~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~  173 (305)
                      ++++++.+.++++|+||||||.........++.+ .+.++|++.+++|+.+++++++.+++.|.++ .++||++||.++.
T Consensus        92 ~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~g~iv~isS~~~~  170 (280)
T 3nrc_A           92 DLFVELGKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNR-NASMVALTYIGAE  170 (280)
T ss_dssp             HHHHHHHHHCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT-TCEEEEEECGGGT
T ss_pred             HHHHHHHHHcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-CCeEEEEeccccc
Confidence            9999999999999999999998653212234555 8999999999999999999999999998765 7899999999999


Q ss_pred             cCCCCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHH
Q 021960          174 MGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEF  253 (305)
Q Consensus       174 ~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (305)
                      .+.++...|+++|+++++|+++++.|++++||+|++|+||+++|+|.......                 ++..+...  
T Consensus       171 ~~~~~~~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~-----------------~~~~~~~~--  231 (280)
T 3nrc_A          171 KAMPSYNTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGISNF-----------------KKMLDYNA--  231 (280)
T ss_dssp             SCCTTTHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCTTH-----------------HHHHHHHH--
T ss_pred             cCCCCchhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCcch-----------------HHHHHHHH--
Confidence            99999999999999999999999999999999999999999999986542110                 11111111  


Q ss_pred             HhhcCCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCccccc
Q 021960          254 VSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTSR  300 (305)
Q Consensus       254 ~~~~~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~~  300 (305)
                       .  ..+.+++.+|+|+|+.++||+++..+++||++|.+|||+++..
T Consensus       232 -~--~~p~~~~~~pedvA~~v~~l~s~~~~~~tG~~i~vdgG~~~~~  275 (280)
T 3nrc_A          232 -M--VSPLKKNVDIMEVGNTVAFLCSDMATGITGEVVHVDAGYHCVS  275 (280)
T ss_dssp             -H--HSTTCSCCCHHHHHHHHHHTTSGGGTTCCSCEEEESTTGGGCC
T ss_pred             -h--cCCCCCCCCHHHHHHHHHHHhCcccCCcCCcEEEECCCccccC
Confidence             1  2567889999999999999999999999999999999987653

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=100.00  E-value=1.8e-46  Score=329.00  Aligned_cols=247  Identities=26%  Similarity=0.350  Sum_probs=201.9

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcc---hhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHH
Q 021960           26 HRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDT---LGSVLASTL--APAPVTFVHCDVSLEEDIENLINST  100 (305)
Q Consensus        26 ~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~---~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~  100 (305)
                      ..++++|++|||||++|||+++|+.|+++|++|++++|...   ..+.+.+.+  .+.++.++.+|++|.++++++++++
T Consensus         6 ~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~   85 (262)
T 3ksu_A            6 YHDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFA   85 (262)
T ss_dssp             CSCCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence            34788999999999999999999999999999999876533   222222222  2457899999999999999999999


Q ss_pred             HHhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCc
Q 021960          101 VSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPH  180 (305)
Q Consensus       101 ~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~  180 (305)
                      .+.++++|+||||||....    .++.+.+.++|++.+++|+.+++++++.++|.|  ++.|+||++||.++..+.++..
T Consensus        86 ~~~~g~iD~lvnnAg~~~~----~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m--~~~g~iv~isS~~~~~~~~~~~  159 (262)
T 3ksu_A           86 EKEFGKVDIAINTVGKVLK----KPIVETSEAEFDAMDTINNKVAYFFIKQAAKHM--NPNGHIITIATSLLAAYTGFYS  159 (262)
T ss_dssp             HHHHCSEEEEEECCCCCCS----SCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTE--EEEEEEEEECCCHHHHHHCCCC
T ss_pred             HHHcCCCCEEEECCCCCCC----CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhh--cCCCEEEEEechhhccCCCCCc
Confidence            9999999999999998654    577889999999999999999999999999998  4468999999999999989999


Q ss_pred             cchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCC
Q 021960          181 AYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNL  260 (305)
Q Consensus       181 ~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (305)
                      .|++||+|+++|+++++.|++++||+||+|+||+++|+|.......                  +..+....     ..+
T Consensus       160 ~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~------------------~~~~~~~~-----~~~  216 (262)
T 3ksu_A          160 TYAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQETK------------------ESTAFHKS-----QAM  216 (262)
T ss_dssp             C-----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHHTCC-----------------------------------C
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCch------------------HHHHHHHh-----cCc
Confidence            9999999999999999999999999999999999999986542211                  00011111     256


Q ss_pred             CCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCccccccc
Q 021960          261 KGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTSRNC  302 (305)
Q Consensus       261 ~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~~~~  302 (305)
                      .+++.+|||+|+.++||+++ ++++||++|.+|||+.....+
T Consensus       217 ~~r~~~pedvA~~v~~L~s~-~~~itG~~i~vdGg~~~~~~~  257 (262)
T 3ksu_A          217 GNQLTKIEDIAPIIKFLTTD-GWWINGQTIFANGGYTTREGH  257 (262)
T ss_dssp             CCCSCCGGGTHHHHHHHHTT-TTTCCSCEEEESTTCCCC---
T ss_pred             ccCCCCHHHHHHHHHHHcCC-CCCccCCEEEECCCccCCCcc
Confidence            78899999999999999999 899999999999998776543

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=100.00  E-value=3.5e-45  Score=321.18  Aligned_cols=245  Identities=31%  Similarity=0.470  Sum_probs=208.5

Q ss_pred             CCCCCCCEEEEecCC-CchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc---CCCCeEEEEecCCCHHHHHHHHHHHH
Q 021960           26 HRRLEGKVAIITGGA-RGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL---APAPVTFVHCDVSLEEDIENLINSTV  101 (305)
Q Consensus        26 ~~~l~~k~vlVtGas-~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~---~~~~v~~~~~D~~d~~~i~~~~~~~~  101 (305)
                      ...+++|++|||||+ +|||+++|++|+++|++|++++|+....+...+.+   .+.++.++.+|++|.++++++++++.
T Consensus        17 ~~~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   96 (266)
T 3o38_A           17 HGLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTV   96 (266)
T ss_dssp             CSTTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHH
Confidence            446889999999998 59999999999999999999999877665544443   33579999999999999999999999


Q ss_pred             HhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC-CCCEEEEecccccccCCCCCc
Q 021960          102 SRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINR-GGGCIISTASVAGVMGGLGPH  180 (305)
Q Consensus       102 ~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~isS~~~~~~~~~~~  180 (305)
                      +.++++|+||||||....    .++.+.+.++|++.+++|+.+++++++.+++.|.++ +.++||++||..+..+.++..
T Consensus        97 ~~~g~id~li~~Ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~  172 (266)
T 3o38_A           97 EKAGRLDVLVNNAGLGGQ----TPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQHSQS  172 (266)
T ss_dssp             HHHSCCCEEEECCCCCCC----CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCCCTTCH
T ss_pred             HHhCCCcEEEECCCcCCC----CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCCCCCCc
Confidence            999999999999997644    567888999999999999999999999999999877 678999999999999999999


Q ss_pred             cchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCC
Q 021960          181 AYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNL  260 (305)
Q Consensus       181 ~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (305)
                      .|+++|+++++|+++++.|++++||+|++|+||+++|++.......                  +..+.+.   .  ..+
T Consensus       173 ~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~------------------~~~~~~~---~--~~~  229 (266)
T 3o38_A          173 HYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTSSS------------------ELLDRLA---S--DEA  229 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC----------------------------------------CCT
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhccCcH------------------HHHHHHH---h--cCC
Confidence            9999999999999999999999999999999999999986543211                  1111111   1  356


Q ss_pred             CCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCcc
Q 021960          261 KGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT  297 (305)
Q Consensus       261 ~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~  297 (305)
                      .+++.+|+|+|+.++||+++.++++||++|.+|||++
T Consensus       230 ~~r~~~~~dva~~i~~l~s~~~~~~tG~~i~vdgG~~  266 (266)
T 3o38_A          230 FGRAAEPWEVAATIAFLASDYSSYMTGEVVSVSSQRA  266 (266)
T ss_dssp             TSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESSCCC
T ss_pred             cCCCCCHHHHHHHHHHHcCccccCccCCEEEEcCCcC
Confidence            7889999999999999999999999999999999974

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=100.00  E-value=6.4e-46  Score=324.91  Aligned_cols=247  Identities=28%  Similarity=0.413  Sum_probs=199.4

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEE-ecCcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHh
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIA-DVEDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSR  103 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~-~r~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~  103 (305)
                      .++++|++|||||++|||+++|+.|+++|++|+++ +++....+...+.+  .+.++.++.+|++|.++++++++++.+.
T Consensus         4 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (259)
T 3edm_A            4 QRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADK   83 (259)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999998 44444433333322  2456889999999999999999999999


Q ss_pred             cCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccc-cCCCCCccc
Q 021960          104 YGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGV-MGGLGPHAY  182 (305)
Q Consensus       104 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~-~~~~~~~~Y  182 (305)
                      +|++|+||||||.....   .++.+.+.++|++.+++|+.+++++++.++|.|.+  .|+||++||..+. .+.++...|
T Consensus        84 ~g~id~lv~nAg~~~~~---~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~~Y  158 (259)
T 3edm_A           84 FGEIHGLVHVAGGLIAR---KTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAK--GGAIVTFSSQAGRDGGGPGALAY  158 (259)
T ss_dssp             HCSEEEEEECCCCCCCC---CCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCHHHHHCCSTTCHHH
T ss_pred             hCCCCEEEECCCccCCC---CChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCEEEEEcCHHhccCCCCCcHHH
Confidence            99999999999976332   56788999999999999999999999999999855  6899999999998 678889999


Q ss_pred             hhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCC
Q 021960          183 TASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKG  262 (305)
Q Consensus       183 ~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (305)
                      ++||+++++|+++++.|+++. |+||+|+||+++|+|.......                  +..+.+..     ..+.+
T Consensus       159 ~asKaa~~~l~~~la~e~~~~-I~vn~v~PG~v~T~~~~~~~~~------------------~~~~~~~~-----~~p~~  214 (259)
T 3edm_A          159 ATSKGAVMTFTRGLAKEVGPK-IRVNAVCPGMISTTFHDTFTKP------------------EVRERVAG-----ATSLK  214 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTT-CEEEEEEECCBCC---------------------------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHCCC-CEEEEEEECCCcCcccccccCh------------------HHHHHHHh-----cCCCC
Confidence            999999999999999999886 9999999999999986543211                  11111111     25678


Q ss_pred             CCCCHHHHHHHHHHhccCCCCceeccEEEecCCccccccc
Q 021960          263 TTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTSRNC  302 (305)
Q Consensus       263 ~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~~~~  302 (305)
                      ++.+|+|+|+.++||+++.++++||++|.+|||++.+.++
T Consensus       215 r~~~pedva~~v~~L~s~~~~~itG~~i~vdGg~~~~~~~  254 (259)
T 3edm_A          215 REGSSEDVAGLVAFLASDDAAYVTGACYDINGGVLFSEGH  254 (259)
T ss_dssp             CCBCHHHHHHHHHHHHSGGGTTCCSCEEEESBCSSBC---
T ss_pred             CCcCHHHHHHHHHHHcCccccCccCCEEEECCCcCCCCCC
Confidence            8999999999999999999999999999999999887654

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=100.00  E-value=1.4e-45  Score=328.44  Aligned_cols=250  Identities=23%  Similarity=0.276  Sum_probs=206.4

Q ss_pred             CCCCCCEEEEecCC--CchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc-CCCCeEEEEecCCCHHHHHHHHHHHHHh
Q 021960           27 RRLEGKVAIITGGA--RGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL-APAPVTFVHCDVSLEEDIENLINSTVSR  103 (305)
Q Consensus        27 ~~l~~k~vlVtGas--~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~-~~~~v~~~~~D~~d~~~i~~~~~~~~~~  103 (305)
                      .++++|++|||||+  +|||+++|+.|+++|++|++++|++...+...+.. ...++.++.+|++|.++++++++++.+.
T Consensus        27 ~~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  106 (293)
T 3grk_A           27 GLLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKK  106 (293)
T ss_dssp             CTTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHh
Confidence            36889999999999  45999999999999999999999854333332221 1135889999999999999999999999


Q ss_pred             cCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccch
Q 021960          104 YGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYT  183 (305)
Q Consensus       104 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~  183 (305)
                      +|++|+||||||.........++.+.+.++|++.+++|+.+++++++.+++.|.+  .|+||++||..+..+.++...|+
T Consensus       107 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~--~g~Iv~isS~~~~~~~~~~~~Y~  184 (293)
T 3grk_A          107 WGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMAD--GGSILTLTYYGAEKVMPNYNVMG  184 (293)
T ss_dssp             TSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTT--CEEEEEEECGGGTSBCTTTTHHH
T ss_pred             cCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccC--CCEEEEEeehhhccCCCchHHHH
Confidence            9999999999998642101256778899999999999999999999999999954  68999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCC
Q 021960          184 ASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGT  263 (305)
Q Consensus       184 ~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (305)
                      +||+|+++|+++++.|++++||+||+|+||+++|+|.......                 ++..+...   .  ..+.++
T Consensus       185 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~-----------------~~~~~~~~---~--~~p~~r  242 (293)
T 3grk_A          185 VAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIGDF-----------------RYILKWNE---Y--NAPLRR  242 (293)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------CCH-----------------HHHHHHHH---H--HSTTSS
T ss_pred             HHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhcccch-----------------HHHHHHHH---h--cCCCCC
Confidence            9999999999999999999999999999999999985432110                 11111111   1  267889


Q ss_pred             CCCHHHHHHHHHHhccCCCCceeccEEEecCCccccc
Q 021960          264 TLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTSR  300 (305)
Q Consensus       264 ~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~~  300 (305)
                      +.+|+|+|+.++||+++.++++||++|.+|||+++..
T Consensus       243 ~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~~~  279 (293)
T 3grk_A          243 TVTIDEVGDVGLYFLSDLSRSVTGEVHHADSGYHVIG  279 (293)
T ss_dssp             CCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGBC
T ss_pred             CCCHHHHHHHHHHHcCccccCCcceEEEECCCcccCC
Confidence            9999999999999999999999999999999987643

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=4.8e-45  Score=320.71  Aligned_cols=248  Identities=32%  Similarity=0.460  Sum_probs=212.0

Q ss_pred             CCCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc---CCCCeEEEEecCCCHHHHHHHHHHHH
Q 021960           25 SHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL---APAPVTFVHCDVSLEEDIENLINSTV  101 (305)
Q Consensus        25 ~~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~---~~~~v~~~~~D~~d~~~i~~~~~~~~  101 (305)
                      ...++++|++|||||++|||+++++.|+++|++|++++|+....+...+.+   .+.++.++.+|++|.++++++++++.
T Consensus        15 ~~~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   94 (267)
T 1vl8_A           15 EVFDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVK   94 (267)
T ss_dssp             --CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence            345778999999999999999999999999999999999876554443322   14568899999999999999999999


Q ss_pred             HhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccc-cccCCCCCc
Q 021960          102 SRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVA-GVMGGLGPH  180 (305)
Q Consensus       102 ~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~-~~~~~~~~~  180 (305)
                      +.++++|+||||||....    .++.+.+.++|++.+++|+.+++++++.+++.|.+++.++||++||.+ +..+.++..
T Consensus        95 ~~~g~iD~lvnnAg~~~~----~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~  170 (267)
T 1vl8_A           95 EKFGKLDTVVNAAGINRR----HPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNIS  170 (267)
T ss_dssp             HHHSCCCEEEECCCCCCC----CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSSCH
T ss_pred             HHcCCCCEEEECCCcCCC----CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhccCCCCCh
Confidence            999999999999998643    567788999999999999999999999999999888889999999999 888888999


Q ss_pred             cchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCC
Q 021960          181 AYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNL  260 (305)
Q Consensus       181 ~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (305)
                      .|+++|+++++|+++++.|++++||+||+|+||+++|+|.......                 ++....   +..  ..+
T Consensus       171 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~-----------------~~~~~~---~~~--~~p  228 (267)
T 1vl8_A          171 AYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSD-----------------PEKLDY---MLK--RIP  228 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTC-----------------HHHHHH---HHH--TCT
T ss_pred             hHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCccccccccccC-----------------hHHHHH---HHh--hCC
Confidence            9999999999999999999999999999999999999985432110                 111111   111  246


Q ss_pred             CCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          261 KGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       261 ~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      .+++.+|+|+|+.++||+++.++++||++|.+|||++.
T Consensus       229 ~~~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG~~~  266 (267)
T 1vl8_A          229 LGRTGVPEDLKGVAVFLASEEAKYVTGQIIFVDGGWTA  266 (267)
T ss_dssp             TSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CCCCcCHHHHHHHHHHHcCccccCCcCCeEEECCCCCC
Confidence            78899999999999999999989999999999999864

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=100.00  E-value=9.7e-46  Score=329.86  Aligned_cols=249  Identities=22%  Similarity=0.244  Sum_probs=209.7

Q ss_pred             CCCCCCEEEEecCCC--chHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc-CCCCeEEEEecCCCHHHHHHHHHHHHHh
Q 021960           27 RRLEGKVAIITGGAR--GIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL-APAPVTFVHCDVSLEEDIENLINSTVSR  103 (305)
Q Consensus        27 ~~l~~k~vlVtGas~--giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~-~~~~v~~~~~D~~d~~~i~~~~~~~~~~  103 (305)
                      .++++|++|||||+|  |||+++|+.|+++|++|++++|++...+.+.+.. ....+.++.+|++|.++++++++++.++
T Consensus        26 ~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  105 (296)
T 3k31_A           26 MLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEE  105 (296)
T ss_dssp             CTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             hccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHH
Confidence            467899999999997  9999999999999999999999865444333222 1123688999999999999999999999


Q ss_pred             cCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccch
Q 021960          104 YGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYT  183 (305)
Q Consensus       104 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~  183 (305)
                      +|++|+||||||.........++.+.+.++|++.+++|+.+++++++.+++.|.+  .|+||++||.++..+.++...|+
T Consensus       106 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~--~g~IV~isS~~~~~~~~~~~~Y~  183 (296)
T 3k31_A          106 WGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTN--GGSILTLSYYGAEKVVPHYNVMG  183 (296)
T ss_dssp             HSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT--CEEEEEEECGGGTSCCTTTTHHH
T ss_pred             cCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc--CCEEEEEEehhhccCCCCchhhH
Confidence            9999999999998642111146678899999999999999999999999998854  68999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCC
Q 021960          184 ASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGT  263 (305)
Q Consensus       184 ~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (305)
                      +||+++++|+++++.|++++||+||+|+||+++|++.......                 ++..+.   ...  ..+.++
T Consensus       184 asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~-----------------~~~~~~---~~~--~~p~~r  241 (296)
T 3k31_A          184 VCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGISDF-----------------HYILTW---NKY--NSPLRR  241 (296)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSCHHH-----------------HHHHHH---HHH--HSTTSS
T ss_pred             HHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhcccch-----------------HHHHHH---HHh--cCCCCC
Confidence            9999999999999999999999999999999999985432100                 011111   111  257889


Q ss_pred             CCCHHHHHHHHHHhccCCCCceeccEEEecCCcccc
Q 021960          264 TLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTS  299 (305)
Q Consensus       264 ~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~  299 (305)
                      +.+|+|+|+.++||+++.++++||++|.+|||+++.
T Consensus       242 ~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~~~~  277 (296)
T 3k31_A          242 NTTLDDVGGAALYLLSDLGRGTTGETVHVDCGYHVV  277 (296)
T ss_dssp             CCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             CCCHHHHHHHHHHHcCCccCCccCCEEEECCCcccc
Confidence            999999999999999999999999999999998765

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=100.00  E-value=2.5e-45  Score=320.26  Aligned_cols=245  Identities=23%  Similarity=0.343  Sum_probs=209.3

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cCcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHH
Q 021960           26 HRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIAD-VEDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVS  102 (305)
Q Consensus        26 ~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~-r~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~  102 (305)
                      ....++|++|||||++|||+++|++|+++|++|++++ |+........+..  .+.++.++.+|++|.++++++++++.+
T Consensus         8 ~~~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   87 (256)
T 3ezl_A            8 HMVMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKA   87 (256)
T ss_dssp             -----CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHH
Confidence            3456899999999999999999999999999999887 4444433322222  345689999999999999999999999


Q ss_pred             hcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccc
Q 021960          103 RYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAY  182 (305)
Q Consensus       103 ~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y  182 (305)
                      .++++|+||||||....    .++.+.+.++|++.+++|+.+++++++.++|.|.+++.++||++||..+..+.++...|
T Consensus        88 ~~g~id~lv~~Ag~~~~----~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  163 (256)
T 3ezl_A           88 EVGEIDVLVNNAGITRD----VVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNY  163 (256)
T ss_dssp             HTCCEEEEEECCCCCCC----CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGSCSCCHHH
T ss_pred             hcCCCCEEEECCCCCCC----CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhccCCCCCccc
Confidence            99999999999998654    56778899999999999999999999999999998888999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCC
Q 021960          183 TASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKG  262 (305)
Q Consensus       183 ~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (305)
                      +++|+++++|+++++.|++++||+|++|+||+++|+|.....                   ++..+.+..     ..+.+
T Consensus       164 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-------------------~~~~~~~~~-----~~~~~  219 (256)
T 3ezl_A          164 STAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIR-------------------PDVLEKIVA-----TIPVR  219 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSC-------------------HHHHHHHHH-----HSTTS
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCccccccC-------------------HHHHHHHHh-----cCCCC
Confidence            999999999999999999999999999999999999865321                   112222221     25678


Q ss_pred             CCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          263 TTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       263 ~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      ++.+|+|+|+.++||++++++++||++|.+|||+++
T Consensus       220 ~~~~~~dva~~~~~l~s~~~~~~tG~~i~vdgG~~~  255 (256)
T 3ezl_A          220 RLGSPDEIGSIVAWLASEESGFSTGADFSLNGGLHM  255 (256)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSCC
T ss_pred             CCcCHHHHHHHHHHHhCCcccCCcCcEEEECCCEeC
Confidence            899999999999999999999999999999999875

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=100.00  E-value=7.5e-45  Score=320.47  Aligned_cols=251  Identities=26%  Similarity=0.396  Sum_probs=208.8

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      .++++|++|||||++|||+++++.|+++|++|++++|+....+...+.+  .+.++.++.+|++|.++++++++++.+.+
T Consensus        17 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   96 (273)
T 1ae1_A           17 WSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVF   96 (273)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            4578999999999999999999999999999999999876555443332  24568899999999999999999999999


Q ss_pred             -CCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccch
Q 021960          105 -GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYT  183 (305)
Q Consensus       105 -g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~  183 (305)
                       +++|+||||||....    .++.+.+.++|++.+++|+.++++++++++|.|.+++.++||++||..+..+.++...|+
T Consensus        97 ~g~id~lv~nAg~~~~----~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~  172 (273)
T 1ae1_A           97 DGKLNILVNNAGVVIH----KEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYS  172 (273)
T ss_dssp             TSCCCEEEECCCCCCC----CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTTCHHHH
T ss_pred             CCCCcEEEECCCCCCC----CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcCCCCCcchhH
Confidence             899999999998643    567788999999999999999999999999999888889999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCC
Q 021960          184 ASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGT  263 (305)
Q Consensus       184 ~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (305)
                      ++|++++.|+++++.|++++||+||+|+||+++|+|.........             ..++..+.+   ..  ..|.++
T Consensus       173 asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~-------------~~~~~~~~~---~~--~~p~~r  234 (273)
T 1ae1_A          173 ASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNP-------------HQKEEIDNF---IV--KTPMGR  234 (273)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC--------------------------CHHHHHHH---HH--HSTTCS
T ss_pred             HHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhhhccc-------------CcHHHHHHH---Hh--cCCCCC
Confidence            999999999999999999999999999999999998543221100             001111111   11  256788


Q ss_pred             CCCHHHHHHHHHHhccCCCCceeccEEEecCCcccc
Q 021960          264 TLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTS  299 (305)
Q Consensus       264 ~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~  299 (305)
                      +.+|+|+|+.++||+++.++++||++|.+|||++..
T Consensus       235 ~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~~~  270 (273)
T 1ae1_A          235 AGKPQEVSALIAFLCFPAASYITGQIIWADGGFTAN  270 (273)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             CcCHHHHHHHHHHHhCccccCcCCCEEEECCCcccC
Confidence            999999999999999999999999999999998764

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=100.00  E-value=2.6e-45  Score=322.65  Aligned_cols=245  Identities=28%  Similarity=0.410  Sum_probs=208.3

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCc-chhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVED-TLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~-~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      .+++|++|||||++|||+++|+.|+++|++|++++++. ...+......  .+.++.++.+|++|.++++++++++.+.+
T Consensus        22 ~~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  101 (269)
T 3gk3_A           22 MQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADF  101 (269)
T ss_dssp             --CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             hhcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            46899999999999999999999999999999988543 3333222222  35678999999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchh
Q 021960          105 GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTA  184 (305)
Q Consensus       105 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~  184 (305)
                      +++|+||||||....    .++.+.+.++|++.+++|+.+++++++.+++.|.+++.++||++||..+..+.++...|++
T Consensus       102 g~id~li~nAg~~~~----~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  177 (269)
T 3gk3_A          102 GKVDVLINNAGITRD----ATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGAFGQANYAS  177 (269)
T ss_dssp             SCCSEEEECCCCCCC----BCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBHHHHH
T ss_pred             CCCCEEEECCCcCCC----cchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhccCCCCcchHHH
Confidence            999999999998654    5677889999999999999999999999999999888899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCC
Q 021960          185 SKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT  264 (305)
Q Consensus       185 sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (305)
                      +|+++++|+++++.|++++||+|++|+||+++|+|.........                   .  ..+..  ..+.+++
T Consensus       178 sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~-------------------~--~~~~~--~~~~~~~  234 (269)
T 3gk3_A          178 AKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAVPQDVL-------------------E--AKILP--QIPVGRL  234 (269)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC----------------------------CCSGG--GCTTSSC
T ss_pred             HHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhhchhHH-------------------H--HHhhh--cCCcCCc
Confidence            99999999999999999999999999999999998654321100                   0  00001  2567888


Q ss_pred             CCHHHHHHHHHHhccCCCCceeccEEEecCCcccc
Q 021960          265 LRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTS  299 (305)
Q Consensus       265 ~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~  299 (305)
                      .+|+|+|+.++||+++.+.++||++|.+|||+.++
T Consensus       235 ~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG~~~s  269 (269)
T 3gk3_A          235 GRPDEVAALIAFLCSDDAGFVTGADLAINGGMHMS  269 (269)
T ss_dssp             BCHHHHHHHHHHHTSTTCTTCCSCEEEESTTSCCC
T ss_pred             cCHHHHHHHHHHHhCCCcCCeeCcEEEECCCEeCc
Confidence            99999999999999999999999999999998753

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=100.00  E-value=3.5e-45  Score=323.93  Aligned_cols=257  Identities=28%  Similarity=0.364  Sum_probs=208.6

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRL  107 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~i  107 (305)
                      ++++|++|||||++|||+++|+.|+++|++|++++|+....+.+.+.. +.++.++.+|++|.++++++++++.+.++++
T Consensus         2 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   80 (281)
T 3zv4_A            2 KLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAH-GGNAVGVVGDVRSLQDQKRAAERCLAAFGKI   80 (281)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT-BTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CcCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHc-CCcEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence            578999999999999999999999999999999999887766655544 4568999999999999999999999999999


Q ss_pred             cEEEEcCCCCCCCCCC-CcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhH
Q 021960          108 DILYNNAGVLGNQRKH-KSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASK  186 (305)
Q Consensus       108 d~li~nag~~~~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  186 (305)
                      |+||||||........ ....+.+.++|++.+++|+.+++++++.++|.|.+++ |+||++||..+..+.++...|++||
T Consensus        81 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asK  159 (281)
T 3zv4_A           81 DTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSR-GSVVFTISNAGFYPNGGGPLYTATK  159 (281)
T ss_dssp             CEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTSSSSSCHHHHHHH
T ss_pred             CEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CeEEEEecchhccCCCCCchhHHHH
Confidence            9999999976432111 1223445678999999999999999999999997754 8999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCC
Q 021960          187 HAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLR  266 (305)
Q Consensus       187 aa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (305)
                      +++++|+++++.|+++. |+||+|+||+++|+|...........         ........+.+.    . ..|.+++.+
T Consensus       160 aa~~~l~~~la~e~~~~-Irvn~v~PG~v~T~~~~~~~~~~~~~---------~~~~~~~~~~~~----~-~~p~~r~~~  224 (281)
T 3zv4_A          160 HAVVGLVRQMAFELAPH-VRVNGVAPGGMNTDLRGPSSLGLSEQ---------SISSVPLADMLK----S-VLPIGRMPA  224 (281)
T ss_dssp             HHHHHHHHHHHHHHTTT-SEEEEEEECSSCC--CCCTTCC-----------------CCHHHHHH----H-TCTTSSCCC
T ss_pred             HHHHHHHHHHHHHhcCC-CEEEEEECCcCcCCcccccccccccc---------cccchhHHHHHH----h-cCCCCCCCC
Confidence            99999999999999987 99999999999999854321110000         000000111111    1 367899999


Q ss_pred             HHHHHHHHHHhcc-CCCCceeccEEEecCCcccccc
Q 021960          267 SKDIAEAALYLAS-DESRYVSGHNLVVDGGVTTSRN  301 (305)
Q Consensus       267 ~~dva~~v~~l~s-~~~~~~tG~~i~idgG~~~~~~  301 (305)
                      |+|+|+.++||+| +.+.|+||++|.+|||++....
T Consensus       225 pedvA~~v~fL~s~~~~~~itG~~i~vdGG~~~~~~  260 (281)
T 3zv4_A          225 LEEYTGAYVFFATRGDSLPATGALLNYDGGMGVRGF  260 (281)
T ss_dssp             GGGGSHHHHHHHSTTTSTTCSSCEEEESSSGGGCCS
T ss_pred             HHHHHHHHHHhhcccccccccCcEEEECCCCccccc
Confidence            9999999999999 7888999999999999987544

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=100.00  E-value=6.4e-45  Score=320.60  Aligned_cols=240  Identities=33%  Similarity=0.456  Sum_probs=205.5

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCc-chhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHh
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVED-TLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSR  103 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~-~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~  103 (305)
                      .++++|++|||||++|||+++|+.|+++|++|++++++. ...+.+.+.+  .+.++.++.+|++|.++++++++++.+.
T Consensus        27 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  106 (271)
T 3v2g_A           27 ISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEA  106 (271)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            367899999999999999999999999999999986654 3333333322  3567899999999999999999999999


Q ss_pred             cCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccC-CCCCccc
Q 021960          104 YGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMG-GLGPHAY  182 (305)
Q Consensus       104 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~-~~~~~~Y  182 (305)
                      +|++|+||||||....    .++.+.+.++|++.+++|+.+++++++.++|.|.  +.++||++||..+..+ .++...|
T Consensus       107 ~g~iD~lvnnAg~~~~----~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~--~~g~iv~isS~~~~~~~~~~~~~Y  180 (271)
T 3v2g_A          107 LGGLDILVNSAGIWHS----APLEETTVADFDEVMAVNFRAPFVAIRSASRHLG--DGGRIITIGSNLAELVPWPGISLY  180 (271)
T ss_dssp             HSCCCEEEECCCCCCC----CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCC--TTCEEEEECCGGGTCCCSTTCHHH
T ss_pred             cCCCcEEEECCCCCCC----CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHh--cCCEEEEEeChhhccCCCCCchHH
Confidence            9999999999998644    6788899999999999999999999999999984  4689999999877665 7889999


Q ss_pred             hhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCC
Q 021960          183 TASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKG  262 (305)
Q Consensus       183 ~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (305)
                      +++|+++++|+++++.|++++||+||+|+||+++|+|.....                 ...   +...   .  ..+.+
T Consensus       181 ~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~-----------------~~~---~~~~---~--~~~~~  235 (271)
T 3v2g_A          181 SASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPADG-----------------DHA---EAQR---E--RIATG  235 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSSC-----------------SSH---HHHH---H--TCTTS
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCcccccc-----------------hhH---HHHH---h--cCCCC
Confidence            999999999999999999999999999999999999853210                 000   1111   1  35778


Q ss_pred             CCCCHHHHHHHHHHhccCCCCceeccEEEecCCcc
Q 021960          263 TTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT  297 (305)
Q Consensus       263 ~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~  297 (305)
                      ++.+|+|+|+.++||+++.++++||++|.+|||++
T Consensus       236 r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~~  270 (271)
T 3v2g_A          236 SYGEPQDIAGLVAWLAGPQGKFVTGASLTIDGGAN  270 (271)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             CCCCHHHHHHHHHHHhCcccCCccCCEEEeCcCcc
Confidence            99999999999999999999999999999999986

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=100.00  E-value=4e-45  Score=325.61  Aligned_cols=245  Identities=27%  Similarity=0.359  Sum_probs=207.7

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcc--hhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHH
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDT--LGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVS  102 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~--~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~  102 (305)
                      .++++|++|||||++|||+++|+.|+++|++|++++|+..  ..+.+.+..  .+.++.++.+|++|.++++++++++.+
T Consensus        45 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  124 (294)
T 3r3s_A           45 GRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKARE  124 (294)
T ss_dssp             STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            4678999999999999999999999999999999988632  222222221  356789999999999999999999999


Q ss_pred             hcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccc
Q 021960          103 RYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAY  182 (305)
Q Consensus       103 ~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y  182 (305)
                      .++++|+||||||.....   .++.+.+.++|++.+++|+.+++++++.++|.|.+  .|+||++||..+..+.++...|
T Consensus       125 ~~g~iD~lv~nAg~~~~~---~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~--~g~Iv~isS~~~~~~~~~~~~Y  199 (294)
T 3r3s_A          125 ALGGLDILALVAGKQTAI---PEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPK--GASIITTSSIQAYQPSPHLLDY  199 (294)
T ss_dssp             HHTCCCEEEECCCCCCCC---SSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCT--TCEEEEECCGGGTSCCTTCHHH
T ss_pred             HcCCCCEEEECCCCcCCC---CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc--CCEEEEECChhhccCCCCchHH
Confidence            999999999999976432   56788999999999999999999999999998843  5899999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCC
Q 021960          183 TASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKG  262 (305)
Q Consensus       183 ~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (305)
                      +++|+++++|+++++.|++++||+||+|+||+++|++.......    .+.                ...+.  ...+.+
T Consensus       200 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~----~~~----------------~~~~~--~~~p~~  257 (294)
T 3r3s_A          200 AATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQT----QDK----------------IPQFG--QQTPMK  257 (294)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTTTSC----GGG----------------STTTT--TTSTTS
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCccccccccCCC----HHH----------------HHHHH--hcCCCC
Confidence            99999999999999999999999999999999999984321110    000                00000  135778


Q ss_pred             CCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          263 TTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       263 ~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      ++.+|+|+|+.++||++++++++||++|.+|||+++
T Consensus       258 r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~l  293 (294)
T 3r3s_A          258 RAGQPAELAPVYVYLASQESSYVTAEVHGVCGGEHL  293 (294)
T ss_dssp             SCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTTCCC
T ss_pred             CCcCHHHHHHHHHHHhCccccCCCCCEEEECCCccC
Confidence            999999999999999999999999999999999875

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=100.00  E-value=1.3e-44  Score=316.61  Aligned_cols=249  Identities=26%  Similarity=0.373  Sum_probs=213.2

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      .++++|++|||||++|||+++++.|+++|++|++++|+....+...+.+  .+.++.++.+|++|.++++++++++.+.+
T Consensus         5 ~~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (260)
T 2ae2_A            5 WNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHF   84 (260)
T ss_dssp             TCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            3578999999999999999999999999999999999876655443332  24568899999999999999999999999


Q ss_pred             -CCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccch
Q 021960          105 -GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYT  183 (305)
Q Consensus       105 -g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~  183 (305)
                       +++|+||||||....    .++.+.+.++|++.+++|+.+++++++.++|.|.+++.++||++||..+..+.++...|+
T Consensus        85 ~g~id~lv~~Ag~~~~----~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  160 (260)
T 2ae2_A           85 HGKLNILVNNAGIVIY----KEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYG  160 (260)
T ss_dssp             TTCCCEEEECCCCCCC----CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTTCHHHH
T ss_pred             CCCCCEEEECCCCCCC----CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCcchHH
Confidence             899999999997643    567788999999999999999999999999999888889999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCC
Q 021960          184 ASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGT  263 (305)
Q Consensus       184 ~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (305)
                      ++|++++.|+++++.|++++||+||+|+||+++|++.......                 ....+.+..+..  ..+.++
T Consensus       161 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-----------------~~~~~~~~~~~~--~~~~~~  221 (260)
T 2ae2_A          161 ATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQD-----------------PEQKENLNKLID--RCALRR  221 (260)
T ss_dssp             HHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTS-----------------HHHHHHHHHHHH--TSTTCS
T ss_pred             HHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhhccC-----------------hhhHHHHHHHHh--cCCCCC
Confidence            9999999999999999999999999999999999986432211                 111111112222  256788


Q ss_pred             CCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          264 TLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       264 ~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      +.+|+|+|+.++||+++.++++||++|.+|||++.
T Consensus       222 ~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~~~  256 (260)
T 2ae2_A          222 MGEPKELAAMVAFLCFPAASYVTGQIIYVDGGLMA  256 (260)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CCCHHHHHHHHHHHcCccccCCCCCEEEECCCccc
Confidence            99999999999999999889999999999999865

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=100.00  E-value=7.3e-45  Score=316.33  Aligned_cols=245  Identities=31%  Similarity=0.417  Sum_probs=203.2

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCc-chhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcC
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVED-TLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYG  105 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~-~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g  105 (305)
                      .++++|++|||||++|||+++++.|+++|++|++++|+. ...+...+. .+.++.++.+|++|.++++++++++.+.++
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   81 (249)
T 2ew8_A            3 QRLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRN-LGRRVLTVKCDVSQPGDVEAFGKQVISTFG   81 (249)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHH-TTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHh-cCCcEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence            357899999999999999999999999999999999987 443322122 245688999999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhh
Q 021960          106 RLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTAS  185 (305)
Q Consensus       106 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  185 (305)
                      ++|+||||||....    .++.+.+.++|++.+++|+.+++++++.++|.|.+++.++||++||..+..+.++...|+++
T Consensus        82 ~id~lv~nAg~~~~----~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  157 (249)
T 2ew8_A           82 RCDILVNNAGIYPL----IPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYIST  157 (249)
T ss_dssp             CCCEEEECCCCCCC----CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSSCHHHHHH
T ss_pred             CCCEEEECCCCCCC----CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCCchhHHHH
Confidence            99999999997643    56778899999999999999999999999999988888999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCC
Q 021960          186 KHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL  265 (305)
Q Consensus       186 Kaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (305)
                      |++++.|+++++.|++++||+||+|+||+++|++.......  .             ..+   ....+    ..+.+++.
T Consensus       158 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~--~-------------~~~---~~~~~----~~~~~~~~  215 (249)
T 2ew8_A          158 KAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALS--A-------------MFD---VLPNM----LQAIPRLQ  215 (249)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCC------------------------------------CT----TSSSCSCC
T ss_pred             HHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccchhcccc--c-------------hhh---HHHHh----hCccCCCC
Confidence            99999999999999999999999999999999985411110  0             000   00000    13567889


Q ss_pred             CHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          266 RSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       266 ~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      +|+|+|+.++||++++++++||++|.+|||+++
T Consensus       216 ~p~dva~~~~~l~s~~~~~~tG~~~~vdGG~~~  248 (249)
T 2ew8_A          216 VPLDLTGAAAFLASDDASFITGQTLAVDGGMVR  248 (249)
T ss_dssp             CTHHHHHHHHHHTSGGGTTCCSCEEEESSSCCC
T ss_pred             CHHHHHHHHHHHcCcccCCCCCcEEEECCCccC
Confidence            999999999999999889999999999999764

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=100.00  E-value=4.5e-45  Score=320.77  Aligned_cols=253  Identities=36%  Similarity=0.590  Sum_probs=212.2

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc----CCCCeEEEEecCCCHHHHHHHHHHHHH
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL----APAPVTFVHCDVSLEEDIENLINSTVS  102 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~----~~~~v~~~~~D~~d~~~i~~~~~~~~~  102 (305)
                      .++++|++|||||++|||+++++.|+++|++|++++|+....+...+.+    .+.++.++.+|++|.++++++++++.+
T Consensus         9 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   88 (267)
T 1iy8_A            9 TRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTE   88 (267)
T ss_dssp             -CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999876554443332    245689999999999999999999999


Q ss_pred             hcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccc
Q 021960          103 RYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAY  182 (305)
Q Consensus       103 ~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y  182 (305)
                      .+|++|+||||||.....   .++.+.+.++|++.+++|+.+++++++.+++.|.+++.++||++||..+..+.++...|
T Consensus        89 ~~g~id~lv~nAg~~~~~---~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  165 (267)
T 1iy8_A           89 RFGRIDGFFNNAGIEGKQ---NPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGY  165 (267)
T ss_dssp             HHSCCSEEEECCCCCCCC---BCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSSBHHH
T ss_pred             HcCCCCEEEECCCcCCCC---CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhccCCCCCccH
Confidence            999999999999975331   45678899999999999999999999999999988888999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCC
Q 021960          183 TASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKG  262 (305)
Q Consensus       183 ~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (305)
                      +++|+++++|+++++.|++++||+||+|+||+++|+|...........           ..+..   ...+..  ..+.+
T Consensus       166 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~-----------~~~~~---~~~~~~--~~p~~  229 (267)
T 1iy8_A          166 AAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPE-----------NPRKA---AEEFIQ--VNPSK  229 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTT-----------CHHHH---HHHHHT--TCTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhccccccChh-----------hhhhH---HHHHhc--cCCCC
Confidence            999999999999999999999999999999999999864321000000           00000   111111  24678


Q ss_pred             CCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          263 TTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       263 ~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      ++.+|+|+|+.++||++++++++||++|.+|||+++
T Consensus       230 r~~~~~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~~  265 (267)
T 1iy8_A          230 RYGEAPEIAAVVAFLLSDDASYVNATVVPIDGGQSA  265 (267)
T ss_dssp             SCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTTT
T ss_pred             CCcCHHHHHHHHHHHcCccccCCCCCEEEECCCccc
Confidence            899999999999999999999999999999999764

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=100.00  E-value=6.6e-45  Score=315.99  Aligned_cols=241  Identities=36%  Similarity=0.550  Sum_probs=208.0

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEec-CcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhcC
Q 021960           29 LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADV-EDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRYG  105 (305)
Q Consensus        29 l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r-~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g  105 (305)
                      |++|++|||||++|||+++++.|+++|++|++++| +....+...+.+  .+.++.++.+|++|.++++++++++.+.++
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   81 (246)
T 2uvd_A            2 LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFG   81 (246)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            57899999999999999999999999999999988 554444333322  245688999999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhh
Q 021960          106 RLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTAS  185 (305)
Q Consensus       106 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  185 (305)
                      ++|+||||||....    .++.+.+.++|++.+++|+.+++++++.++|.|.+++.++||++||..+..+.++...|+++
T Consensus        82 ~id~lv~nAg~~~~----~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  157 (246)
T 2uvd_A           82 QVDILVNNAGVTKD----NLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGNPGQANYVAA  157 (246)
T ss_dssp             CCCEEEECCCCCCC----BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTBHHHHHH
T ss_pred             CCCEEEECCCCCCC----CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcCCCCCCchHHHH
Confidence            99999999997643    56778899999999999999999999999999988888999999999999998999999999


Q ss_pred             HHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCC
Q 021960          186 KHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL  265 (305)
Q Consensus       186 Kaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (305)
                      |+++++|+++++.|++++||+||+|+||+++|+|.... ..                  +....+   ..  ..+.+++.
T Consensus       158 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~------------------~~~~~~---~~--~~p~~~~~  213 (246)
T 2uvd_A          158 KAGVIGLTKTSAKELASRNITVNAIAPGFIATDMTDVL-DE------------------NIKAEM---LK--LIPAAQFG  213 (246)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSCC-CT------------------THHHHH---HH--TCTTCSCB
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEEeccccCcchhhc-CH------------------HHHHHH---Hh--cCCCCCCc
Confidence            99999999999999999999999999999999985321 00                  011111   11  24667889


Q ss_pred             CHHHHHHHHHHhccCCCCceeccEEEecCCcc
Q 021960          266 RSKDIAEAALYLASDESRYVSGHNLVVDGGVT  297 (305)
Q Consensus       266 ~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~  297 (305)
                      +|+|+|+.++||++++++++||++|.+|||++
T Consensus       214 ~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG~~  245 (246)
T 2uvd_A          214 EAQDIANAVTFFASDQSKYITGQTLNVDGGMV  245 (246)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTSC
T ss_pred             CHHHHHHHHHHHcCchhcCCCCCEEEECcCcc
Confidence            99999999999999999999999999999975

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=100.00  E-value=4.8e-45  Score=319.79  Aligned_cols=256  Identities=30%  Similarity=0.448  Sum_probs=211.4

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      .++++|++|||||++|||+++++.|+++|++|++++|+....+...+.+  .+.++.++.+|++|.++++++++++.+.+
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (262)
T 1zem_A            3 KKFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDF   82 (262)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHh
Confidence            3578999999999999999999999999999999999876655444333  24568899999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchh
Q 021960          105 GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTA  184 (305)
Q Consensus       105 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~  184 (305)
                      +++|+||||||.....   .++.+.+.++|++.+++|+.+++++++.+++.|.+++.++||++||..+..+.++...|++
T Consensus        83 g~id~lv~nAg~~~~~---~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  159 (262)
T 1zem_A           83 GKIDFLFNNAGYQGAF---APVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGT  159 (262)
T ss_dssp             SCCCEEEECCCCCCCC---BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTTBHHHHH
T ss_pred             CCCCEEEECCCCCCCC---CccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCCchHHH
Confidence            9999999999975221   5677889999999999999999999999999998888899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCC-cHH-HHHHHHHHHhhcCCCCC
Q 021960          185 SKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIP-SQK-EVRKMEEFVSGLGNLKG  262 (305)
Q Consensus       185 sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~  262 (305)
                      +|+++++|+++++.|++++||+||+|+||+++|+|.......     ..........+ .++ ..+.+.   .  ..|.+
T Consensus       160 sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~---~--~~p~~  229 (262)
T 1zem_A          160 SKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVE-----LQAKVGSQYFSTDPKVVAQQMI---G--SVPMR  229 (262)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHH-----HHHHHTCTTSCSSHHHHHHHHH---H--TSTTS
T ss_pred             HHHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcchhhhhccc-----hhhhccccccccCHHHHHHHHH---h--cCCCC
Confidence            999999999999999999999999999999999986432000     00000000001 111 111111   1  25778


Q ss_pred             CCCCHHHHHHHHHHhccCCCCceeccEEEecCC
Q 021960          263 TTLRSKDIAEAALYLASDESRYVSGHNLVVDGG  295 (305)
Q Consensus       263 ~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG  295 (305)
                      ++.+|+|+|+.++||+++.++++||++|.+|||
T Consensus       230 r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG  262 (262)
T 1zem_A          230 RYGDINEIPGVVAFLLGDDSSFMTGVNLPIAGG  262 (262)
T ss_dssp             SCBCGGGSHHHHHHHHSGGGTTCCSCEEEESCC
T ss_pred             CCcCHHHHHHHHHHHcCchhcCcCCcEEecCCC
Confidence            999999999999999999999999999999998

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=100.00  E-value=9.2e-45  Score=318.07  Aligned_cols=256  Identities=27%  Similarity=0.351  Sum_probs=213.4

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcC---CCCeEEEEecCCCHHHHHHHHHHHHHh
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLA---PAPVTFVHCDVSLEEDIENLINSTVSR  103 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~i~~~~~~~~~~  103 (305)
                      +++++|++|||||++|||+++++.|+++|++|++++|+....+...+.+.   +.++.++.+|++|.++++++++++.+.
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   82 (263)
T 3ai3_A            3 MGISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSS   82 (263)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999998765554433331   456889999999999999999999999


Q ss_pred             cCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccch
Q 021960          104 YGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYT  183 (305)
Q Consensus       104 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~  183 (305)
                      ++++|+||||||....    .++.+.+.++|++.+++|+.+++++++.++|.|.+++.++||++||.++..+.++...|+
T Consensus        83 ~g~id~lv~~Ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  158 (263)
T 3ai3_A           83 FGGADILVNNAGTGSN----ETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQPLWYEPIYN  158 (263)
T ss_dssp             HSSCSEEEECCCCCCC----CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHH
T ss_pred             cCCCCEEEECCCCCCC----CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCCcchHH
Confidence            9999999999997643    567788999999999999999999999999999888889999999999999989999999


Q ss_pred             hhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCC
Q 021960          184 ASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGT  263 (305)
Q Consensus       184 ~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (305)
                      ++|++++.++++++.|++++||+||+|+||+++|++........        ......+.++..+.+.   .. ..+.++
T Consensus       159 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~--------~~~~~~~~~~~~~~~~---~~-~~p~~~  226 (263)
T 3ai3_A          159 VTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKTAKEL--------TKDNGGDWKGYLQSVA---DE-HAPIKR  226 (263)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHH--------TTTTTCCHHHHHHHHH---HH-HCTTCS
T ss_pred             HHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhhhhHhh--------hcccCCcHHHHHHHHH---hc-CCCCCC
Confidence            99999999999999999999999999999999999864421100        0000001111111111   11 146688


Q ss_pred             CCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          264 TLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       264 ~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      +.+|+|+|+.++||++++.++++|++|.+|||++.
T Consensus       227 ~~~~~dvA~~~~~l~s~~~~~~~G~~~~vdgG~~~  261 (263)
T 3ai3_A          227 FASPEELANFFVFLCSERATYSVGSAYFVDGGMLK  261 (263)
T ss_dssp             CBCHHHHHHHHHHHTSTTCTTCCSCEEEESTTCCC
T ss_pred             CcCHHHHHHHHHHHcCccccCCCCcEEEECCCccc
Confidence            99999999999999999999999999999999865

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=8.1e-45  Score=320.78  Aligned_cols=248  Identities=26%  Similarity=0.328  Sum_probs=211.3

Q ss_pred             CCCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcC-CCCeEEEEecCCCHHHHHHHHHHHHHh
Q 021960           25 SHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLA-PAPVTFVHCDVSLEEDIENLINSTVSR  103 (305)
Q Consensus        25 ~~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~-~~~v~~~~~D~~d~~~i~~~~~~~~~~  103 (305)
                      ..+++++|++|||||++|||+++++.|+++|++|++++|+....+...+.+. ..++.++.+|++|.++++++++++.+.
T Consensus        23 ~~~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  102 (276)
T 2b4q_A           23 PYFSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGEL  102 (276)
T ss_dssp             TTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHh
Confidence            3456889999999999999999999999999999999998766554444332 126889999999999999999999999


Q ss_pred             cCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCC----CEEEEecccccccCCCCC
Q 021960          104 YGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGG----GCIISTASVAGVMGGLGP  179 (305)
Q Consensus       104 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~----~~iv~isS~~~~~~~~~~  179 (305)
                      ++++|+||||||....    .++.+.+.++|++.+++|+.+++++++.++|.|.+++.    ++||++||.++..+.++.
T Consensus       103 ~g~iD~lvnnAg~~~~----~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~~~~  178 (276)
T 2b4q_A          103 SARLDILVNNAGTSWG----AALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMGEQ  178 (276)
T ss_dssp             CSCCSEEEECCCCCCC----CCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCCCCS
T ss_pred             cCCCCEEEECCCCCCC----CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCCCCC
Confidence            9999999999997643    56778899999999999999999999999999987665    899999999999888888


Q ss_pred             c-cchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcC
Q 021960          180 H-AYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLG  258 (305)
Q Consensus       180 ~-~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (305)
                      . .|+++|++++.|+++++.|++++||+||+|+||+++|+|.......                   ..+.   +.....
T Consensus       179 ~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~-------------------~~~~---~~~~~~  236 (276)
T 2b4q_A          179 AYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRHIAND-------------------PQAL---EADSAS  236 (276)
T ss_dssp             CTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHHHHHC-------------------HHHH---HHHHHT
T ss_pred             ccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhhcchh-------------------HHHH---HHhhcC
Confidence            8 9999999999999999999999999999999999999985432110                   0001   111002


Q ss_pred             CCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          259 NLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       259 ~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      .+.+++.+|+|+|+.++||+++.++++||++|.+|||+++
T Consensus       237 ~p~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~L  276 (276)
T 2b4q_A          237 IPMGRWGRPEEMAALAISLAGTAGAYMTGNVIPIDGGFHL  276 (276)
T ss_dssp             STTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTC
T ss_pred             CCCCCcCCHHHHHHHHHHHhCccccCCCCCEEEeCCCccC
Confidence            4678899999999999999999889999999999999753

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=100.00  E-value=6e-45  Score=318.90  Aligned_cols=242  Identities=21%  Similarity=0.211  Sum_probs=196.9

Q ss_pred             CCCCCCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHH
Q 021960           22 APPSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTV  101 (305)
Q Consensus        22 ~~~~~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~  101 (305)
                      .....+++++|++|||||++|||+++|+.|+++|++|++++|+...........   .+.++.+|++|.++++++++++.
T Consensus        18 ~~~~~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~Dv~~~~~v~~~~~~~~   94 (260)
T 3gem_A           18 YFQGHMTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQA---GAVALYGDFSCETGIMAFIDLLK   94 (260)
T ss_dssp             ---------CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHH---TCEEEECCTTSHHHHHHHHHHHH
T ss_pred             ccccCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhc---CCeEEECCCCCHHHHHHHHHHHH
Confidence            333446788999999999999999999999999999999999876543322222   27889999999999999999999


Q ss_pred             HhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCcc
Q 021960          102 SRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHA  181 (305)
Q Consensus       102 ~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~  181 (305)
                      +.++++|+||||||....    .. .+.+.++|++.+++|+.+++++++.++|.|.+++.++||++||..+..+.++...
T Consensus        95 ~~~g~iD~lv~nAg~~~~----~~-~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~  169 (260)
T 3gem_A           95 TQTSSLRAVVHNASEWLA----ET-PGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKGSSKHIA  169 (260)
T ss_dssp             HHCSCCSEEEECCCCCCC----CC-TTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTCCSSCHH
T ss_pred             HhcCCCCEEEECCCccCC----CC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCCcHh
Confidence            999999999999997644    22 4567899999999999999999999999999888899999999999999999999


Q ss_pred             chhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCC
Q 021960          182 YTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLK  261 (305)
Q Consensus       182 Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (305)
                      |++||+++++|+++++.|+++ +|+||+|+||+++|++....                     ...+..   ..  ..+.
T Consensus       170 Y~asKaa~~~l~~~la~e~~~-~Irvn~v~PG~v~t~~~~~~---------------------~~~~~~---~~--~~p~  222 (260)
T 3gem_A          170 YCATKAGLESLTLSFAARFAP-LVKVNGIAPALLMFQPKDDA---------------------AYRANA---LA--KSAL  222 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTT-TCEEEEEEECTTCC-----------------------------------------CCS
T ss_pred             HHHHHHHHHHHHHHHHHHHCC-CCEEEEEeecccccCCCCCH---------------------HHHHHH---Hh--cCCC
Confidence            999999999999999999988 69999999999999863210                     000111   11  2577


Q ss_pred             CCCCCHHHHHHHHHHhccCCCCceeccEEEecCCccccc
Q 021960          262 GTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTSR  300 (305)
Q Consensus       262 ~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~~  300 (305)
                      +++.+|+|+|+.++||+  ++.++||++|.+|||+++..
T Consensus       223 ~r~~~~edva~~v~~L~--~~~~itG~~i~vdGG~~~~~  259 (260)
T 3gem_A          223 GIEPGAEVIYQSLRYLL--DSTYVTGTTLTVNGGRHVKG  259 (260)
T ss_dssp             CCCCCTHHHHHHHHHHH--HCSSCCSCEEEESTTTTTC-
T ss_pred             CCCCCHHHHHHHHHHHh--hCCCCCCCEEEECCCcccCC
Confidence            88999999999999999  46799999999999998753

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=100.00  E-value=4.2e-45  Score=319.75  Aligned_cols=254  Identities=31%  Similarity=0.466  Sum_probs=205.7

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcch-hhhHhhhcC---CCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           29 LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTL-GSVLASTLA---PAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        29 l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~-~~~~~~~~~---~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      |++|++|||||++|||+++++.|+++|++|++++|+... .+...+.+.   +.++.++.+|++|.++++++++++.+.+
T Consensus         2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   81 (260)
T 1x1t_A            2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            578999999999999999999999999999999998765 444333321   4468899999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchh
Q 021960          105 GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTA  184 (305)
Q Consensus       105 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~  184 (305)
                      +++|+||||||....    .++.+.+.++|++.+++|+.+++++++.++|.|.+++.++||++||..+..+.++...|++
T Consensus        82 g~iD~lv~~Ag~~~~----~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~  157 (260)
T 1x1t_A           82 GRIDILVNNAGIQHT----ALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVA  157 (260)
T ss_dssp             SCCSEEEECCCCCCC----CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHH
T ss_pred             CCCCEEEECCCCCCC----CChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCcCCCCCchHHH
Confidence            999999999997643    5677889999999999999999999999999998888899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCC
Q 021960          185 SKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT  264 (305)
Q Consensus       185 sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (305)
                      +|+++++|+++++.|++++||+||+|+||+++|+|..........        ..+.+.++..+.+.  ..  ..|.+++
T Consensus       158 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~--------~~~~~~~~~~~~~~--~~--~~p~~~~  225 (260)
T 1x1t_A          158 AKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAE--------KNGVDQETAARELL--SE--KQPSLQF  225 (260)
T ss_dssp             HHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC--------------------------------CH--HH--HCTTCCC
T ss_pred             HHHHHHHHHHHHHHHhccCCEEEEEEeecCccCchHHHhhhhhcc--------ccCCchHHHHHHHh--hc--cCCCCCC
Confidence            999999999999999999999999999999999986543211000        00000011111110  11  1467889


Q ss_pred             CCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          265 LRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       265 ~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      .+|+|+|+.++||+++.++++||++|.+|||++.
T Consensus       226 ~~p~dva~~~~~l~s~~~~~~tG~~~~vdgG~~~  259 (260)
T 1x1t_A          226 VTPEQLGGTAVFLASDAAAQITGTTVSVDGGWTA  259 (260)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             cCHHHHHHHHHHHhChhhcCCCCCEEEECCCccC
Confidence            9999999999999999889999999999999764

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=1.2e-44  Score=314.31  Aligned_cols=240  Identities=36%  Similarity=0.535  Sum_probs=208.7

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRL  107 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~i  107 (305)
                      ++++|++|||||++|||+++++.|+++|++|++++|+....+...+.+ +  +.++.+|++|.++++++++++.+.++++
T Consensus         2 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~--~~~~~~D~~~~~~~~~~~~~~~~~~g~i   78 (245)
T 1uls_A            2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV-G--AHPVVMDVADPASVERGFAEALAHLGRL   78 (245)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-T--CEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-C--CEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            468999999999999999999999999999999999876655544433 2  7889999999999999999999999999


Q ss_pred             cEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhHH
Q 021960          108 DILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKH  187 (305)
Q Consensus       108 d~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKa  187 (305)
                      |+||||||....    .++.+.+.++|++.+++|+.+++++++.+++.|.+++.++||++||.. ..+.++...|+++|+
T Consensus        79 d~lvn~Ag~~~~----~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~-~~~~~~~~~Y~asK~  153 (245)
T 1uls_A           79 DGVVHYAGITRD----NFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRV-YLGNLGQANYAASMA  153 (245)
T ss_dssp             CEEEECCCCCCC----CCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGG-GGCCTTCHHHHHHHH
T ss_pred             CEEEECCCCCCC----CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccch-hcCCCCchhHHHHHH
Confidence            999999997643    567788999999999999999999999999999888889999999998 888888999999999


Q ss_pred             HHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCCH
Q 021960          188 AIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRS  267 (305)
Q Consensus       188 a~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (305)
                      ++++|+++++.|++++||+||+|+||+++|+|....                  + ++..+.+   ..  ..+.+++.+|
T Consensus       154 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~------------------~-~~~~~~~---~~--~~p~~~~~~~  209 (245)
T 1uls_A          154 GVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKV------------------P-EKVREKA---IA--ATPLGRAGKP  209 (245)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSS------------------C-HHHHHHH---HH--TCTTCSCBCH
T ss_pred             HHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchhhc------------------C-HHHHHHH---Hh--hCCCCCCcCH
Confidence            999999999999999999999999999999984321                  0 1111111   11  2466788999


Q ss_pred             HHHHHHHHHhccCCCCceeccEEEecCCcccc
Q 021960          268 KDIAEAALYLASDESRYVSGHNLVVDGGVTTS  299 (305)
Q Consensus       268 ~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~  299 (305)
                      +|+|+.++||+++.++++||++|.+|||+++.
T Consensus       210 ~dvA~~v~~l~s~~~~~~tG~~~~vdgG~~~~  241 (245)
T 1uls_A          210 LEVAYAALFLLSDESSFITGQVLFVDGGRTIG  241 (245)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESTTTTTT
T ss_pred             HHHHHHHHHHhCchhcCCcCCEEEECCCcccC
Confidence            99999999999998899999999999998654

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=100.00  E-value=6.3e-45  Score=320.59  Aligned_cols=245  Identities=29%  Similarity=0.436  Sum_probs=208.9

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcch-hhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHH
Q 021960           26 HRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTL-GSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVS  102 (305)
Q Consensus        26 ~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~-~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~  102 (305)
                      .+++++|++|||||++|||+++|++|+++|++|++++|+... .+.+.+.+  .+.++.++.+|++|.++++++++++.+
T Consensus        24 ~m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~  103 (271)
T 4iin_A           24 AMQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQ  103 (271)
T ss_dssp             CCCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             hcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHH
Confidence            456789999999999999999999999999999999995433 33333222  355799999999999999999999999


Q ss_pred             hcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccc
Q 021960          103 RYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAY  182 (305)
Q Consensus       103 ~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y  182 (305)
                      .++++|+||||||....    .++.+.+.++|++.+++|+.+++++++.+++.|.+++.++||++||..+..+.++...|
T Consensus       104 ~~g~id~li~nAg~~~~----~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  179 (271)
T 4iin_A          104 SDGGLSYLVNNAGVVRD----KLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERGNMGQTNY  179 (271)
T ss_dssp             HHSSCCEEEECCCCCCC----CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHH
T ss_pred             hcCCCCEEEECCCcCCC----cccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcCCCCCchHh
Confidence            99999999999998754    56778899999999999999999999999999998888999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCC
Q 021960          183 TASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKG  262 (305)
Q Consensus       183 ~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (305)
                      +++|+++++|+++++.|++++||+|++|+||+++|+|.....+.                      ....+..  ..+.+
T Consensus       180 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~----------------------~~~~~~~--~~~~~  235 (271)
T 4iin_A          180 SASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANLKDE----------------------LKADYVK--NIPLN  235 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC----------------------------------CGG--GCTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhhhcHH----------------------HHHHHHh--cCCcC
Confidence            99999999999999999999999999999999999986543111                      0001111  25678


Q ss_pred             CCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          263 TTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       263 ~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      ++.+|+|+|+.++||+++.++++||++|.+|||+.+
T Consensus       236 ~~~~p~dvA~~i~~l~s~~~~~itG~~i~vdGG~~~  271 (271)
T 4iin_A          236 RLGSAKEVAEAVAFLLSDHSSYITGETLKVNGGLYM  271 (271)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSCC
T ss_pred             CCcCHHHHHHHHHHHhCCCcCCCcCCEEEeCCCeeC
Confidence            899999999999999999999999999999999863

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=100.00  E-value=1.7e-44  Score=315.55  Aligned_cols=251  Identities=31%  Similarity=0.449  Sum_probs=209.2

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcch--hhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhcCC
Q 021960           31 GKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTL--GSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRYGR  106 (305)
Q Consensus        31 ~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~--~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~  106 (305)
                      +|++|||||++|||+++++.|+++|++|++++|+...  .+...+.+  .+.++.++.+|++|.++++++++++.+.+++
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   81 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLGG   81 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            6899999999999999999999999999999998765  44333332  2456899999999999999999999999999


Q ss_pred             ccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCC-CEEEEecccccccCCCCCccchhh
Q 021960          107 LDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGG-GCIISTASVAGVMGGLGPHAYTAS  185 (305)
Q Consensus       107 id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~iv~isS~~~~~~~~~~~~Y~~s  185 (305)
                      +|+||||||....    .++.+.+.++|++.+++|+.+++++++.++|.|.+++. ++||++||..+..+.++...|+++
T Consensus        82 iD~lv~nAg~~~~----~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  157 (258)
T 3a28_C           82 FDVLVNNAGIAQI----KPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQGFPILSAYSTT  157 (258)
T ss_dssp             CCEEEECCCCCCC----CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             CCEEEECCCCCCC----CChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccCCCCchhHHHH
Confidence            9999999997643    56778899999999999999999999999999988776 999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCC
Q 021960          186 KHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL  265 (305)
Q Consensus       186 Kaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (305)
                      |+++++|+++++.|++++||+||+|+||+++|+|........        ........++..+.   +..  ..|.+++.
T Consensus       158 K~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~--------~~~~~~~~~~~~~~---~~~--~~p~~r~~  224 (258)
T 3a28_C          158 KFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQIDAEL--------SKINGKPIGENFKE---YSS--SIALGRPS  224 (258)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSHHHHHHHHHH--------HHHHCCCTTHHHHH---HHT--TCTTSSCB
T ss_pred             HHHHHHHHHHHHHHHHhhCeEEEEEECCccCChhhhhhhhhh--------ccccCCchHHHHHH---HHh--cCCCCCcc
Confidence            999999999999999999999999999999999864321100        00000000111111   111  24678899


Q ss_pred             CHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          266 RSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       266 ~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      +|+|+|+.++||+++.++++||++|.+|||+++
T Consensus       225 ~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~~  257 (258)
T 3a28_C          225 VPEDVAGLVSFLASENSNYVTGQVMLVDGGMLY  257 (258)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESSSSCC
T ss_pred             CHHHHHHHHHHHhCcccCCCCCCEEEECCCEec
Confidence            999999999999999999999999999999764

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=100.00  E-value=6.5e-45  Score=321.53  Aligned_cols=245  Identities=34%  Similarity=0.485  Sum_probs=202.0

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCc------------chhhhHhhhc--CCCCeEEEEecCCCHHH
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVED------------TLGSVLASTL--APAPVTFVHCDVSLEED   92 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~------------~~~~~~~~~~--~~~~v~~~~~D~~d~~~   92 (305)
                      .+++||++|||||++|||+++|+.|+++|++|++++|++            ...+...+.+  .+.++.++.+|++|.++
T Consensus         9 ~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   88 (278)
T 3sx2_A            9 GPLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRES   88 (278)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHH
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHH
Confidence            467899999999999999999999999999999998872            2222222211  24579999999999999


Q ss_pred             HHHHHHHHHHhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-CCEEEEecccc
Q 021960           93 IENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRG-GGCIISTASVA  171 (305)
Q Consensus        93 i~~~~~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~  171 (305)
                      ++++++++.+.+|++|+||||||.....        .+.++|++.+++|+.+++++++.++|.|.+++ .++||++||.+
T Consensus        89 v~~~~~~~~~~~g~id~lv~nAg~~~~~--------~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~  160 (278)
T 3sx2_A           89 LSAALQAGLDELGRLDIVVANAGIAPMS--------AGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSA  160 (278)
T ss_dssp             HHHHHHHHHHHHCCCCEEEECCCCCCCS--------STHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGG
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCC--------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHH
Confidence            9999999999999999999999975331        15789999999999999999999999998765 78999999999


Q ss_pred             cccCC----CCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHH
Q 021960          172 GVMGG----LGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEV  247 (305)
Q Consensus       172 ~~~~~----~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (305)
                      +..+.    ++...|++||+++++|+++++.|++++||+||+|+||+++|+|.......                  +..
T Consensus       161 ~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~------------------~~~  222 (278)
T 3sx2_A          161 GLAGVGSADPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTR------------------EWL  222 (278)
T ss_dssp             GTSCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHH------------------HHH
T ss_pred             hcCCCccCCCCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchhhhHH------------------HHH
Confidence            98876    67789999999999999999999999999999999999999985432110                  011


Q ss_pred             HHHHHHH-----hhcCCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          248 RKMEEFV-----SGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       248 ~~~~~~~-----~~~~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      .......     .....+ +++.+|+|+|+.++||+++.++++||++|.+|||++.
T Consensus       223 ~~~~~~~~~~~~~~~~~p-~~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG~~~  277 (278)
T 3sx2_A          223 AKMAAATDTPGAMGNAMP-VEVLAPEDVANAVAWLVSDQARYITGVTLPVDAGFLN  277 (278)
T ss_dssp             HHHHHHCC--CTTSCSSS-CSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTTT
T ss_pred             hhccchhhhhhhhhhhcC-cCcCCHHHHHHHHHHHhCcccccccCCEEeECCCccc
Confidence            1111000     011234 6788999999999999999999999999999999864

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=3.4e-45  Score=324.68  Aligned_cols=238  Identities=24%  Similarity=0.285  Sum_probs=207.5

Q ss_pred             CCCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchh-------hhHhhhc--CCCCeEEEEecCCCHHHHHH
Q 021960           25 SHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLG-------SVLASTL--APAPVTFVHCDVSLEEDIEN   95 (305)
Q Consensus        25 ~~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~-------~~~~~~~--~~~~v~~~~~D~~d~~~i~~   95 (305)
                      ..+++++|++|||||++|||+++|+.|+++|++|++++|+....       +...+.+  .+.++.++.+|++|.+++++
T Consensus         3 ~~m~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~   82 (285)
T 3sc4_A            3 GSMSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAA   82 (285)
T ss_dssp             ---CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHH
T ss_pred             CCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHH
Confidence            34568899999999999999999999999999999999986531       1222211  24568999999999999999


Q ss_pred             HHHHHHHhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccC
Q 021960           96 LINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMG  175 (305)
Q Consensus        96 ~~~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~  175 (305)
                      +++++.+.++++|+||||||....    .++.+.+.++|++.+++|+.+++++++.++|.|++++.++||++||..+..+
T Consensus        83 ~~~~~~~~~g~id~lvnnAg~~~~----~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~  158 (285)
T 3sc4_A           83 AVAKTVEQFGGIDICVNNASAINL----GSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEP  158 (285)
T ss_dssp             HHHHHHHHHSCCSEEEECCCCCCC----CCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSG
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCC----CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccC
Confidence            999999999999999999998743    5778899999999999999999999999999998888899999999999888


Q ss_pred             C-CCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCC-ccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHH
Q 021960          176 G-LGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPF-GVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEF  253 (305)
Q Consensus       176 ~-~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG-~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (305)
                      . ++...|++||+++++|+++++.|++++||+||+|+|| .++|++..+.+..                           
T Consensus       159 ~~~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t~~~~~~~~~---------------------------  211 (285)
T 3sc4_A          159 KWLRPTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVATAAVQNLLGG---------------------------  211 (285)
T ss_dssp             GGSCSHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCCHHHHHHHTS---------------------------
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCccccHHHHhhccc---------------------------
Confidence            6 7789999999999999999999999999999999999 6999986544322                           


Q ss_pred             HhhcCCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          254 VSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       254 ~~~~~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                          ..+.+++.+|||+|+.++||+++.+ ++||+++.+|||+..
T Consensus       212 ----~~~~~r~~~pedvA~~~~~l~s~~~-~~tG~~i~~dgg~~~  251 (285)
T 3sc4_A          212 ----DEAMARSRKPEVYADAAYVVLNKPS-SYTGNTLLCEDVLLE  251 (285)
T ss_dssp             ----CCCCTTCBCTHHHHHHHHHHHTSCT-TCCSCEEEHHHHHHH
T ss_pred             ----cccccCCCCHHHHHHHHHHHhCCcc-cccceEEEEcCchhc
Confidence                2456788899999999999999988 999999999999754

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=100.00  E-value=1.7e-44  Score=316.86  Aligned_cols=253  Identities=21%  Similarity=0.277  Sum_probs=213.5

Q ss_pred             CCCCCCCEEEEecCC--CchHHHHHHHHHHcCCeEEEEecCcchhhhHhhh---cCCCCeEEEEecCCCHHHHHHHHHHH
Q 021960           26 HRRLEGKVAIITGGA--RGIGEAAVRLFARHGAKVVIADVEDTLGSVLAST---LAPAPVTFVHCDVSLEEDIENLINST  100 (305)
Q Consensus        26 ~~~l~~k~vlVtGas--~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~---~~~~~v~~~~~D~~d~~~i~~~~~~~  100 (305)
                      ..++++|++|||||+  +|||+++|+.|+++|++|++++|++...+...+.   ....++.++.+|++|.++++++++++
T Consensus         2 ~~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   81 (266)
T 3oig_A            2 NFSLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASI   81 (266)
T ss_dssp             CSCCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHH
T ss_pred             ccccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHH
Confidence            346889999999999  6699999999999999999999886544433332   23346899999999999999999999


Q ss_pred             HHhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCc
Q 021960          101 VSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPH  180 (305)
Q Consensus       101 ~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~  180 (305)
                      .+.++++|+||||||.........++.+.+.+++++.+++|+.+++++++.+++.|.  +.++||++||.++..+.++..
T Consensus        82 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~g~iv~isS~~~~~~~~~~~  159 (266)
T 3oig_A           82 KEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMT--EGGSIVTLTYLGGELVMPNYN  159 (266)
T ss_dssp             HHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCT--TCEEEEEEECGGGTSCCTTTH
T ss_pred             HHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcC--CCceEEEEecccccccCCCcc
Confidence            999999999999999865322235677889999999999999999999999999885  368999999999999999999


Q ss_pred             cchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCC
Q 021960          181 AYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNL  260 (305)
Q Consensus       181 ~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (305)
                      .|++||+++++|+++++.|++++||+|++|+||+++|+|.......                 .+....+.   .  ..+
T Consensus       160 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~-----------------~~~~~~~~---~--~~~  217 (266)
T 3oig_A          160 VMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGISDF-----------------NSILKDIE---E--RAP  217 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTH-----------------HHHHHHHH---H--HST
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccccch-----------------HHHHHHHH---h--cCC
Confidence            9999999999999999999999999999999999999986542110                 11112221   1  256


Q ss_pred             CCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCccccccc
Q 021960          261 KGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTSRNC  302 (305)
Q Consensus       261 ~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~~~~  302 (305)
                      .+++.+|+|+|+.++||+++.++++||++|.+|||++....+
T Consensus       218 ~~~~~~p~dva~~v~~l~s~~~~~~tG~~i~vdGG~~~~~~~  259 (266)
T 3oig_A          218 LRRTTTPEEVGDTAAFLFSDMSRGITGENLHVDSGFHITARL  259 (266)
T ss_dssp             TSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCCCC
T ss_pred             CCCCCCHHHHHHHHHHHcCCchhcCcCCEEEECCCeEEeeec
Confidence            788999999999999999999999999999999999776543

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=100.00  E-value=1.5e-44  Score=315.37  Aligned_cols=242  Identities=38%  Similarity=0.537  Sum_probs=210.6

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRL  107 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~i  107 (305)
                      +|++|++|||||++|||+++++.|+++|++|++++|+....+...+.+ +.++.++.+|++|.++++++++++.+.++++
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   80 (254)
T 1hdc_A            2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL-GDAARYQHLDVTIEEDWQRVVAYAREEFGSV   80 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-GGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-CCceeEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            468999999999999999999999999999999999876655554443 3468899999999999999999999999999


Q ss_pred             cEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhHH
Q 021960          108 DILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKH  187 (305)
Q Consensus       108 d~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKa  187 (305)
                      |+||||||....    .++.+.+.++|++.+++|+.+++++++.+++.|.+++.++||++||..+..+.++...|+++|+
T Consensus        81 D~lv~nAg~~~~----~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~  156 (254)
T 1hdc_A           81 DGLVNNAGISTG----MFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKW  156 (254)
T ss_dssp             CEEEECCCCCCC----SCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             CEEEECCCCCCC----CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCCchhHHHHHH
Confidence            999999997643    5677889999999999999999999999999998888899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCC-C
Q 021960          188 AIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL-R  266 (305)
Q Consensus       188 a~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  266 (305)
                      ++++|+++++.|++++||+||+|+||+++|++.....+...   +                   .+..  ..+.+++. +
T Consensus       157 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~---~-------------------~~~~--~~p~~~~~~~  212 (254)
T 1hdc_A          157 GVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQG---E-------------------GNYP--NTPMGRVGNE  212 (254)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTCCCS---T-------------------TSCT--TSTTSSCB-C
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEecccCcCccccccchhHH---H-------------------HHHh--cCCCCCCCCC
Confidence            99999999999999999999999999999998654211000   0                   0000  13567788 9


Q ss_pred             HHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          267 SKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       267 ~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      |+|+|+.++||+++.+++++|++|.+|||++.
T Consensus       213 ~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~~~  244 (254)
T 1hdc_A          213 PGEIAGAVVKLLSDTSSYVTGAELAVDGGWTT  244 (254)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTTTTT
T ss_pred             HHHHHHHHHHHhCchhcCCCCCEEEECCCccc
Confidence            99999999999999889999999999999865

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=100.00  E-value=1e-44  Score=322.51  Aligned_cols=244  Identities=24%  Similarity=0.278  Sum_probs=207.8

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cCcchhhhHhhhc---CCCCeEEEEecCCCHH-----------
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIAD-VEDTLGSVLASTL---APAPVTFVHCDVSLEE-----------   91 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~-r~~~~~~~~~~~~---~~~~v~~~~~D~~d~~-----------   91 (305)
                      .++++|++|||||++|||+++++.|+++|++|++++ |+....+...+.+   .+.++.++.+|++|.+           
T Consensus         5 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   84 (291)
T 1e7w_A            5 TAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSA   84 (291)
T ss_dssp             ---CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CC
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCccccccccccccc
Confidence            357899999999999999999999999999999999 8876555444333   2457899999999999           


Q ss_pred             ------HHHHHHHHHHHhcCCccEEEEcCCCCCCCCCCCcccCCC--------------HHHHHHHHHHHhHHHHHHHHH
Q 021960           92 ------DIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFD--------------ADEFDNVMRVNVKGMALGIKH  151 (305)
Q Consensus        92 ------~i~~~~~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~--------------~~~~~~~~~~n~~~~~~l~~~  151 (305)
                            +++++++++.+.++++|+||||||....    .++.+.+              .++|++.+++|+.+++++++.
T Consensus        85 ~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~  160 (291)
T 1e7w_A           85 PVTLFTRCAELVAACYTHWGRCDVLVNNASSFYP----TPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKA  160 (291)
T ss_dssp             CBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCC----CCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHH
T ss_pred             ccchHHHHHHHHHHHHHhcCCCCEEEECCCCCCC----CChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHH
Confidence                  9999999999999999999999997643    4566777              899999999999999999999


Q ss_pred             HHHHHHcCC------CCEEEEecccccccCCCCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhccc
Q 021960          152 AARVMINRG------GGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWR  225 (305)
Q Consensus       152 ~~~~~~~~~------~~~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~  225 (305)
                      ++|.|.+++      .++||++||..+..+.++...|+++|+++++|+++++.|++++||+||+|+||+++|+| .  +.
T Consensus       161 ~~~~m~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~-~--~~  237 (291)
T 1e7w_A          161 FAHRVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-D--MP  237 (291)
T ss_dssp             HHHHHHTSCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGG-G--SC
T ss_pred             HHHHHHhcCCCCCCCCcEEEEEechhhcCCCCCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCccCCc-c--CC
Confidence            999998877      79999999999999999999999999999999999999999999999999999999998 3  21


Q ss_pred             CCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCC-CCCCHHHHHHHHHHhccCCCCceeccEEEecCCccccc
Q 021960          226 NSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKG-TTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTSR  300 (305)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~~  300 (305)
                      .                  +..+.+   ..  ..|.+ ++.+|+|+|+.++||+++.++++||++|.+|||+++.+
T Consensus       238 ~------------------~~~~~~---~~--~~p~~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~~~  290 (291)
T 1e7w_A          238 P------------------AVWEGH---RS--KVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLTR  290 (291)
T ss_dssp             H------------------HHHHHH---HT--TCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCC
T ss_pred             H------------------HHHHHH---Hh--hCCCCCCCCCHHHHHHHHHHHhCCcccCccCcEEEECCCccccc
Confidence            0                  111111   11  24666 88999999999999999999999999999999987653

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=4.4e-45  Score=323.78  Aligned_cols=256  Identities=28%  Similarity=0.402  Sum_probs=203.8

Q ss_pred             CCCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecC------------cchhhhHhhhc--CCCCeEEEEecCCCH
Q 021960           25 SHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVE------------DTLGSVLASTL--APAPVTFVHCDVSLE   90 (305)
Q Consensus        25 ~~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~------------~~~~~~~~~~~--~~~~v~~~~~D~~d~   90 (305)
                      .+.+++||++|||||++|||+++|+.|+++|++|++++|+            ....+......  .+.++.++.+|++|.
T Consensus         4 ~m~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   83 (287)
T 3pxx_A            4 SMGRVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDR   83 (287)
T ss_dssp             SCCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCH
T ss_pred             cccccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCH
Confidence            3457899999999999999999999999999999999886            22222222211  356799999999999


Q ss_pred             HHHHHHHHHHHHhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEeccc
Q 021960           91 EDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASV  170 (305)
Q Consensus        91 ~~i~~~~~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~  170 (305)
                      ++++++++++.+.++++|+||||||....    .  .+.+.++|++.+++|+.+++++++.++|.|  ++.++||++||.
T Consensus        84 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~----~--~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~--~~~g~iv~isS~  155 (287)
T 3pxx_A           84 AAVSRELANAVAEFGKLDVVVANAGICPL----G--AHLPVQAFADAFDVDFVGVINTVHAALPYL--TSGASIITTGSV  155 (287)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCC----C--TTCCTHHHHHHHHHHTHHHHHHHHHHGGGC--CTTCEEEEECCH
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCcCcc----c--CcCCHHHHHHHhhhhhhhhHHHHHHHHHHh--hcCcEEEEeccc
Confidence            99999999999999999999999998643    2  236889999999999999999999999988  556899999999


Q ss_pred             ccccCC-----------CCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhh-c
Q 021960          171 AGVMGG-----------LGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECM-N  238 (305)
Q Consensus       171 ~~~~~~-----------~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~-~  238 (305)
                      ++..+.           ++...|+++|+++++|+++++.|++++||+||+|+||+++|+|.......       .... .
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~-------~~~~~~  228 (287)
T 3pxx_A          156 AGLIAAAQPPGAGGPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMY-------RQFRPD  228 (287)
T ss_dssp             HHHHHHHCCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSHHHH-------HHHCTT
T ss_pred             hhcccccccccccccCCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccchh-------hhhccc
Confidence            988765           66789999999999999999999999999999999999999986432100       0000 0


Q ss_pred             cCCCcHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          239 FGIPSQKEVRKMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      ...+..  .+....+......+ +++.+|+|+|+.++||+|++++|+||++|.+|||+++
T Consensus       229 ~~~~~~--~~~~~~~~~~~~~~-~~~~~p~dva~~v~fL~s~~a~~itG~~i~vdGG~~~  285 (287)
T 3pxx_A          229 LEAPSR--ADALLAFPAMQAMP-TPYVEASDISNAVCFLASDESRYVTGLQFKVDAGAML  285 (287)
T ss_dssp             SSSCCH--HHHHHHGGGGCSSS-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             cccchh--HHHHhhhhhhcccC-CCCCCHHHHHhhHheecchhhcCCCCceEeECchhhh
Confidence            000111  11111111111233 7889999999999999999999999999999999875

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=100.00  E-value=1.5e-45  Score=322.03  Aligned_cols=244  Identities=26%  Similarity=0.343  Sum_probs=194.5

Q ss_pred             CCCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           25 SHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        25 ~~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      ..+++++|++|||||++|||+++++.|+++|++|++++|+.+..   .+.+ +.++.++.+|++|.++++++++.+.+ +
T Consensus         3 ~~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~---~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~-~   77 (257)
T 3tl3_A            3 GSMEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDV---VADL-GDRARFAAADVTDEAAVASALDLAET-M   77 (257)
T ss_dssp             -------CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHH---HHHT-CTTEEEEECCTTCHHHHHHHHHHHHH-H
T ss_pred             CcceecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHH---HHhc-CCceEEEECCCCCHHHHHHHHHHHHH-h
Confidence            34578899999999999999999999999999999999854322   2222 45689999999999999999998877 8


Q ss_pred             CCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHc--------CCCCEEEEecccccccCC
Q 021960          105 GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMIN--------RGGGCIISTASVAGVMGG  176 (305)
Q Consensus       105 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--------~~~~~iv~isS~~~~~~~  176 (305)
                      +++|+||||||.........+..+.+.++|++.+++|+.+++++++.+++.|.+        ++.|+||++||..+..+.
T Consensus        78 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  157 (257)
T 3tl3_A           78 GTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQ  157 (257)
T ss_dssp             SCEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--CCH
T ss_pred             CCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcCCC
Confidence            999999999997532111112234789999999999999999999999999987        567899999999999998


Q ss_pred             CCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhh
Q 021960          177 LGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSG  256 (305)
Q Consensus       177 ~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (305)
                      ++...|++||+++++|+++++.|++++||+||+|+||+++|+|.....                   ++..+.+.   . 
T Consensus       158 ~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~-------------------~~~~~~~~---~-  214 (257)
T 3tl3_A          158 IGQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLASLP-------------------EEARASLG---K-  214 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC---C-------------------HHHHHHHH---H-
T ss_pred             CCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhhcc-------------------HHHHHHHH---h-
Confidence            889999999999999999999999999999999999999999854321                   11111111   1 


Q ss_pred             cCCCC-CCCCCHHHHHHHHHHhccCCCCceeccEEEecCCcccc
Q 021960          257 LGNLK-GTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTS  299 (305)
Q Consensus       257 ~~~~~-~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~  299 (305)
                       ..+. +++.+|+|+|+.++||+++  .++||++|.+|||+++.
T Consensus       215 -~~~~~~r~~~p~dva~~v~~l~s~--~~itG~~i~vdGG~~~~  255 (257)
T 3tl3_A          215 -QVPHPSRLGNPDEYGALAVHIIEN--PMLNGEVIRLDGAIRMA  255 (257)
T ss_dssp             -TSSSSCSCBCHHHHHHHHHHHHHC--TTCCSCEEEESTTC---
T ss_pred             -cCCCCCCccCHHHHHHHHHHHhcC--CCCCCCEEEECCCccCC
Confidence             2455 8899999999999999987  69999999999998764

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=100.00  E-value=3.4e-44  Score=313.30  Aligned_cols=251  Identities=33%  Similarity=0.476  Sum_probs=209.7

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 021960           31 GKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRYGRLD  108 (305)
Q Consensus        31 ~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id  108 (305)
                      +|++|||||++|||+++++.|+++|++|++++|+....+...+.+  .+.++.++.+|++|.++++++++++.+.++++|
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   81 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFD   81 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence            689999999999999999999999999999999876555443332  245688999999999999999999999999999


Q ss_pred             EEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-CCEEEEecccccccCCCCCccchhhHH
Q 021960          109 ILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRG-GGCIISTASVAGVMGGLGPHAYTASKH  187 (305)
Q Consensus       109 ~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sKa  187 (305)
                      +||||||....    .++.+.+.++|++.+++|+.+++++++.+++.|.+++ .++||++||..+..+.++...|+++|+
T Consensus        82 ~lv~nAg~~~~----~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~  157 (256)
T 1geg_A           82 VIVNNAGVAPS----TPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKF  157 (256)
T ss_dssp             EEEECCCCCCC----BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred             EEEECCCCCCC----CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCCchhHHHHHH
Confidence            99999997643    5677889999999999999999999999999998877 789999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCCH
Q 021960          188 AIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRS  267 (305)
Q Consensus       188 a~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (305)
                      ++++|+++++.|++++||+||+|+||+++|+|.......        .....+.+.++..+.   +..  ..|.+++.+|
T Consensus       158 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~--------~~~~~~~~~~~~~~~---~~~--~~p~~r~~~p  224 (256)
T 1geg_A          158 AVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQ--------VSEAAGKPLGYGTAE---FAK--RITLGRLSEP  224 (256)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHH--------HHHHHTCCTTHHHHH---HHT--TCTTCSCBCH
T ss_pred             HHHHHHHHHHHHHHHcCeEEEEEEECCCccchhhhhhhh--------ccccccCChHHHHHH---HHh--cCCCCCCcCH
Confidence            999999999999999999999999999999985432100        000000011111111   111  2467889999


Q ss_pred             HHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          268 KDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       268 ~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      +|+|+.++||+++.++++||++|.+|||+++
T Consensus       225 ~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~~  255 (256)
T 1geg_A          225 EDVAACVSYLASPDSDYMTGQSLLIDGGMVF  255 (256)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESSSSSC
T ss_pred             HHHHHHHHHHhCccccCCCCCEEEeCCCccC
Confidence            9999999999999999999999999999764

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=100.00  E-value=2.8e-44  Score=314.47  Aligned_cols=248  Identities=33%  Similarity=0.451  Sum_probs=212.0

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      .++++|++|||||++|||+++++.|+++|++|++++|+....+...+.+  .+.++.++.+|++|.++++++++++.+.+
T Consensus        10 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   89 (260)
T 2zat_A           10 KPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLH   89 (260)
T ss_dssp             CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            3578999999999999999999999999999999999876554433332  24568899999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchh
Q 021960          105 GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTA  184 (305)
Q Consensus       105 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~  184 (305)
                      +++|+||||||.....   .++.+.+.++|++.+++|+.+++++++.++|.|.+++.++||++||..+..+.++...|++
T Consensus        90 g~iD~lv~~Ag~~~~~---~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~  166 (260)
T 2zat_A           90 GGVDILVSNAAVNPFF---GNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGPYNV  166 (260)
T ss_dssp             SCCCEEEECCCCCCCC---BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHH
T ss_pred             CCCCEEEECCCCCCCC---CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcCCCCCchhHHH
Confidence            9999999999975321   4677889999999999999999999999999998888899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCC
Q 021960          185 SKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT  264 (305)
Q Consensus       185 sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (305)
                      +|++++.|+++++.|++++||+||+|+||+++|++....+..                 ++....+..     ..+.+++
T Consensus       167 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-----------------~~~~~~~~~-----~~~~~~~  224 (260)
T 2zat_A          167 SKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWMD-----------------KARKEYMKE-----SLRIRRL  224 (260)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHHHHSS-----------------HHHHHHHHH-----HHTCSSC
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEEECcccCccchhcccC-----------------hHHHHHHHh-----cCCCCCC
Confidence            999999999999999999999999999999999986443221                 111111111     1356788


Q ss_pred             CCHHHHHHHHHHhccCCCCceeccEEEecCCcccc
Q 021960          265 LRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTS  299 (305)
Q Consensus       265 ~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~  299 (305)
                      .+|+|+|+.++||+++.+++++|++|.+|||...+
T Consensus       225 ~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~~s  259 (260)
T 2zat_A          225 GNPEDCAGIVSFLCSEDASYITGETVVVGGGTASR  259 (260)
T ss_dssp             BCGGGGHHHHHHHTSGGGTTCCSCEEEESTTCCCC
T ss_pred             CCHHHHHHHHHHHcCcccCCccCCEEEECCCcccc
Confidence            99999999999999999999999999999997653

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=100.00  E-value=3.6e-44  Score=317.67  Aligned_cols=278  Identities=27%  Similarity=0.413  Sum_probs=211.2

Q ss_pred             CCCCCCCCCCcCcceeeeccCCCCCCCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcch-hhhHhhhc--CC
Q 021960            1 MPAQVMPETNLQGIHVLAWDDAPPSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTL-GSVLASTL--AP   77 (305)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~-~~~~~~~~--~~   77 (305)
                      ||+++.+... ...+..+-. .++...++++|++|||||++|||+++++.|+++|++|++++|+... .+...+.+  .+
T Consensus         1 ~~~~~~~r~~-~~~~~~~~~-~~~~~~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~   78 (283)
T 1g0o_A            1 MPAVTQPRGE-SKYDAIPGP-LGPQSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNG   78 (283)
T ss_dssp             ------------CTTCCCSC-SSGGGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT
T ss_pred             CCCcccCccc-cccCCCCCC-CCCcccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhC
Confidence            6666555432 222222221 1223346789999999999999999999999999999999987643 22222222  24


Q ss_pred             CCeEEEEecCCCHHHHHHHHHHHHHhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Q 021960           78 APVTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMI  157 (305)
Q Consensus        78 ~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~  157 (305)
                      .++.++.+|++|.++++++++++.+.++++|+||||||....    .++.+.+.++|++.+++|+.+++++++.+++.| 
T Consensus        79 ~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv~~Ag~~~~----~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~-  153 (283)
T 1g0o_A           79 SDAACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSF----GHVKDVTPEEFDRVFTINTRGQFFVAREAYKHL-  153 (283)
T ss_dssp             CCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCC----CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHS-
T ss_pred             CCeEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCC----CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHH-
Confidence            568999999999999999999999999999999999998643    567788999999999999999999999999998 


Q ss_pred             cCCCCEEEEecccccccCCCC-CccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhh
Q 021960          158 NRGGGCIISTASVAGVMGGLG-PHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDEC  236 (305)
Q Consensus       158 ~~~~~~iv~isS~~~~~~~~~-~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~  236 (305)
                       ++.++||++||..+..+.+. ...|+++|+++++|+++++.|++++||+||+|+||+++|+|............     
T Consensus       154 -~~~g~iv~isS~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~-----  227 (283)
T 1g0o_A          154 -EIGGRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNG-----  227 (283)
T ss_dssp             -CTTCEEEEECCGGGTCSSCSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTC-----
T ss_pred             -hcCCeEEEEechhhccCCCCCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccchhhhhhhhhccccc-----
Confidence             45689999999999887664 88999999999999999999999999999999999999998654321100000     


Q ss_pred             hccCCCcHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCcc
Q 021960          237 MNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT  297 (305)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~  297 (305)
                         ....++..+.+   ......+.+++.+|+|+|+.++||+++.++++||++|.+|||++
T Consensus       228 ---~~~~~~~~~~~---~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdgG~~  282 (283)
T 1g0o_A          228 ---ENLSNEEVDEY---AAVQWSPLRRVGLPIDIARVVCFLASNDGGWVTGKVIGIDGGAC  282 (283)
T ss_dssp             ---TTCCHHHHHHH---HHHHSCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTCC
T ss_pred             ---cccCHHHHHHH---HhhcCCCCCCCcCHHHHHHHHHHHhCccccCcCCCEEEeCCCcc
Confidence               00011111111   11012577889999999999999999999999999999999975

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=4.5e-44  Score=312.60  Aligned_cols=249  Identities=33%  Similarity=0.478  Sum_probs=209.9

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRL  107 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~i  107 (305)
                      ++++|++|||||++|||+++++.|+++|++|++++|+... +...+.+.  + .++.+|++|.++++++++++.+.++++
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~--~-~~~~~D~~~~~~~~~~~~~~~~~~g~i   78 (256)
T 2d1y_A            3 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIG--G-AFFQVDLEDERERVRFVEEAAYALGRV   78 (256)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHT--C-EEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhh--C-CEEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999999999999999999999999999999998766 44443333  3 788999999999999999999999999


Q ss_pred             cEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhHH
Q 021960          108 DILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKH  187 (305)
Q Consensus       108 d~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKa  187 (305)
                      |+||||||....    .++.+.+.++|++.+++|+.+++++++.++|.|.+++.++||++||.++..+.++...|+++|+
T Consensus        79 D~lv~~Ag~~~~----~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  154 (256)
T 2d1y_A           79 DVLVNNAAIAAP----GSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKG  154 (256)
T ss_dssp             CEEEECCCCCCC----BCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTTBHHHHHHHH
T ss_pred             CEEEECCCCCCC----CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCCChhHHHHHH
Confidence            999999997643    5677889999999999999999999999999998888899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCCH
Q 021960          188 AIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRS  267 (305)
Q Consensus       188 a~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (305)
                      ++++|+++++.|++++||+||+|+||+++|++..........             .++..+.   +..  ..+.+++.+|
T Consensus       155 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~-------------~~~~~~~---~~~--~~~~~~~~~~  216 (256)
T 2d1y_A          155 GLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPD-------------PERTRRD---WED--LHALRRLGKP  216 (256)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC---------------------CHH---HHT--TSTTSSCBCH
T ss_pred             HHHHHHHHHHHHHhhcCeEEEEEeeCCccCchhhhccccccC-------------CHHHHHH---HHh--cCCCCCCcCH
Confidence            999999999999999999999999999999986542110000             0000011   111  2466889999


Q ss_pred             HHHHHHHHHhccCCCCceeccEEEecCCccccccc
Q 021960          268 KDIAEAALYLASDESRYVSGHNLVVDGGVTTSRNC  302 (305)
Q Consensus       268 ~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~~~~  302 (305)
                      +|+|+.++||+++.+++++|++|.+|||.+..-.+
T Consensus       217 ~dvA~~~~~l~s~~~~~~~G~~~~v~gG~~~~~~~  251 (256)
T 2d1y_A          217 EEVAEAVLFLASEKASFITGAILPVDGGMTASFMM  251 (256)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESTTGGGBC--
T ss_pred             HHHHHHHHHHhCchhcCCCCCEEEECCCccccccc
Confidence            99999999999998899999999999998765443

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=100.00  E-value=2.1e-44  Score=315.31  Aligned_cols=253  Identities=23%  Similarity=0.343  Sum_probs=208.1

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcC----CCCeEEEEecCCCHHHHHHHHHHHHH
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLA----PAPVTFVHCDVSLEEDIENLINSTVS  102 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~----~~~v~~~~~D~~d~~~i~~~~~~~~~  102 (305)
                      +++++|++|||||++|||+++++.|+++|++|++++|+....+...+.+.    +.++.++.+|++|.++++++++++.+
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   82 (260)
T 2z1n_A            3 LGIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARD   82 (260)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999998765554433331    33689999999999999999999999


Q ss_pred             hcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccc
Q 021960          103 RYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAY  182 (305)
Q Consensus       103 ~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y  182 (305)
                      .++ +|+||||||....    .++.+.+.++|++.+++|+.+++++++.++|.|.+++.++||++||..+..+.++...|
T Consensus        83 ~~g-id~lv~~Ag~~~~----~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  157 (260)
T 2z1n_A           83 LGG-ADILVYSTGGPRP----GRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQDLALS  157 (260)
T ss_dssp             TTC-CSEEEECCCCCCC----BCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHH
T ss_pred             hcC-CCEEEECCCCCCC----CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCCchh
Confidence            998 9999999997543    56778899999999999999999999999999988888999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCC
Q 021960          183 TASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKG  262 (305)
Q Consensus       183 ~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (305)
                      +++|+++++++++++.|++++||+||+|+||+++|++..........        ....+.+...   ..+..  ..|.+
T Consensus       158 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~--------~~~~~~~~~~---~~~~~--~~p~~  224 (260)
T 2z1n_A          158 NIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERAR--------RSGITVEEAL---KSMAS--RIPMG  224 (260)
T ss_dssp             HHHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC------------------------------------CCTTS
T ss_pred             HHHHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhhhhhhhhhc--------ccCCcHHHHH---HHHHh--cCCCC
Confidence            99999999999999999999999999999999999985422111000        0000000000   11111  24678


Q ss_pred             CCCCHHHHHHHHHHhccCCCCceeccEEEecCCcc
Q 021960          263 TTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT  297 (305)
Q Consensus       263 ~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~  297 (305)
                      ++.+|+|+|+.++||+++.++++||++|.+|||++
T Consensus       225 r~~~~~dva~~v~~l~s~~~~~~tG~~i~vdGG~~  259 (260)
T 2z1n_A          225 RVGKPEELASVVAFLASEKASFITGAVIPVDGGAH  259 (260)
T ss_dssp             SCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTT
T ss_pred             CccCHHHHHHHHHHHhCccccCCCCCEEEeCCCcc
Confidence            89999999999999999998999999999999975

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=100.00  E-value=3.3e-44  Score=316.98  Aligned_cols=254  Identities=28%  Similarity=0.431  Sum_probs=212.2

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhcC
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRYG  105 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g  105 (305)
                      ++++|++|||||++|||+++++.|+++|++|++++|+....+...+.+  .+.++.++.+|++|.++++++++++.+.++
T Consensus        19 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   98 (277)
T 2rhc_B           19 TQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYG   98 (277)
T ss_dssp             CTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            678999999999999999999999999999999999876554443333  245688999999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHH--HHcCCCCEEEEecccccccCCCCCccch
Q 021960          106 RLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARV--MINRGGGCIISTASVAGVMGGLGPHAYT  183 (305)
Q Consensus       106 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~~iv~isS~~~~~~~~~~~~Y~  183 (305)
                      ++|+||||||....    .++.+.+.++|++.+++|+.+++++++.+++.  |.+++.++||++||..+..+.++...|+
T Consensus        99 ~iD~lv~~Ag~~~~----~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~  174 (277)
T 2rhc_B           99 PVDVLVNNAGRPGG----GATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYS  174 (277)
T ss_dssp             SCSEEEECCCCCCC----SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTSCCTTCHHHH
T ss_pred             CCCEEEECCCCCCC----CChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccccccCCCCCccHH
Confidence            99999999997643    56778899999999999999999999999998  8777779999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCC
Q 021960          184 ASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGT  263 (305)
Q Consensus       184 ~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (305)
                      ++|++++.|+++++.|++++||+||+|+||+++|+|........        ........++..+.   +..  ..+.++
T Consensus       175 asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~--------~~~~~~~~~~~~~~---~~~--~~p~~r  241 (277)
T 2rhc_B          175 ASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHY--------SDIWEVSTEEAFDR---ITA--RVPIGR  241 (277)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHHHHHHHH--------HHHHTCCHHHHHHH---HHH--HSTTSS
T ss_pred             HHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhhhhhhhc--------ccccccchHHHHHH---HHh--cCCCCC
Confidence            99999999999999999999999999999999999854321100        00000000111111   111  246788


Q ss_pred             CCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          264 TLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       264 ~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      +.+|+|+|+.++||+++++++++|++|.+|||++.
T Consensus       242 ~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdGG~~~  276 (277)
T 2rhc_B          242 YVQPSEVAEMVAYLIGPGAAAVTAQALNVCGGLGN  276 (277)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTCCC
T ss_pred             CcCHHHHHHHHHHHhCchhcCCCCcEEEECCCccc
Confidence            99999999999999999989999999999999754

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=100.00  E-value=2.1e-44  Score=316.33  Aligned_cols=243  Identities=28%  Similarity=0.425  Sum_probs=208.8

Q ss_pred             CCCCCCEEEEecCC--CchHHHHHHHHHHcCCeEEEEecCcchh-hhHhhhc---CCCCeEEEEecCCCHHHHHHHHHHH
Q 021960           27 RRLEGKVAIITGGA--RGIGEAAVRLFARHGAKVVIADVEDTLG-SVLASTL---APAPVTFVHCDVSLEEDIENLINST  100 (305)
Q Consensus        27 ~~l~~k~vlVtGas--~giG~~ia~~l~~~g~~vv~~~r~~~~~-~~~~~~~---~~~~v~~~~~D~~d~~~i~~~~~~~  100 (305)
                      .++++|++|||||+  +|||+++|++|+++|++|++++|+.... +...+.+   .+.++.++.+|++|.++++++++++
T Consensus        16 ~~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   95 (267)
T 3gdg_A           16 LSLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDV   95 (267)
T ss_dssp             HCCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHH
T ss_pred             cCcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHH
Confidence            36789999999999  9999999999999999999998875443 2222221   2567999999999999999999999


Q ss_pred             HHhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCC--CC
Q 021960          101 VSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGG--LG  178 (305)
Q Consensus       101 ~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~--~~  178 (305)
                      .+.++++|+||||||....    .++.+.+.++|++.+++|+.+++++++.++|.|.+++.++||++||.++..+.  ++
T Consensus        96 ~~~~g~id~li~nAg~~~~----~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  171 (267)
T 3gdg_A           96 VADFGQIDAFIANAGATAD----SGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANFPQE  171 (267)
T ss_dssp             HHHTSCCSEEEECCCCCCC----SCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCSSSC
T ss_pred             HHHcCCCCEEEECCCcCCC----CCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEccccccccCCCCC
Confidence            9999999999999998654    56778899999999999999999999999999998888999999999988775  57


Q ss_pred             CccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcC
Q 021960          179 PHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLG  258 (305)
Q Consensus       179 ~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (305)
                      ...|+++|+++++|+++++.|+++. |+||+|+||+++|+|.....                   ++..+.+.   .  .
T Consensus       172 ~~~Y~~sK~a~~~~~~~la~e~~~~-i~v~~v~PG~v~t~~~~~~~-------------------~~~~~~~~---~--~  226 (267)
T 3gdg_A          172 QTSYNVAKAGCIHMARSLANEWRDF-ARVNSISPGYIDTGLSDFVP-------------------KETQQLWH---S--M  226 (267)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTTTT-CEEEEEEECCEECSCGGGSC-------------------HHHHHHHH---T--T
T ss_pred             CCcchHHHHHHHHHHHHHHHHhccC-cEEEEEECCccccchhhhCC-------------------HHHHHHHH---h--c
Confidence            8899999999999999999999877 99999999999999854320                   11111111   1  3


Q ss_pred             CCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          259 NLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       259 ~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      .+.+++.+|+|+|+.++||+++.++++||++|.+|||++.
T Consensus       227 ~~~~r~~~~~dva~~~~~l~s~~~~~itG~~i~vdgG~~~  266 (267)
T 3gdg_A          227 IPMGRDGLAKELKGAYVYFASDASTYTTGADLLIDGGYTT  266 (267)
T ss_dssp             STTSSCEETHHHHHHHHHHHSTTCTTCCSCEEEESTTGGG
T ss_pred             CCCCCCcCHHHHHhHhheeecCccccccCCEEEECCceec
Confidence            6788999999999999999999999999999999999875

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=100.00  E-value=1e-44  Score=315.80  Aligned_cols=247  Identities=31%  Similarity=0.472  Sum_probs=179.8

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHh
Q 021960           26 HRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSR  103 (305)
Q Consensus        26 ~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~  103 (305)
                      .+++++|++|||||++|||+++|++|+++|++|++++|+....+.+.+.+  .+.++.++.+|++|.++++++++++.+.
T Consensus         4 ~~~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   83 (253)
T 3qiv_A            4 SMRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAE   83 (253)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            45678999999999999999999999999999999999877665554443  3456899999999999999999999999


Q ss_pred             cCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccch
Q 021960          104 YGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYT  183 (305)
Q Consensus       104 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~  183 (305)
                      ++++|+||||||..... ...++.+.+.++|++.+++|+.+++++++.+++.|.+++.++||++||..++   ++...|+
T Consensus        84 ~g~id~li~~Ag~~~~~-~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~---~~~~~Y~  159 (253)
T 3qiv_A           84 FGGIDYLVNNAAIFGGM-KLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAW---LYSNYYG  159 (253)
T ss_dssp             HSCCCEEEECCCCCCGG-GGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC--------------
T ss_pred             cCCCCEEEECCCcCCCC-CCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCcccc---CCCchhH
Confidence            99999999999985321 2245677899999999999999999999999999998889999999999876   4567899


Q ss_pred             hhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCC
Q 021960          184 ASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGT  263 (305)
Q Consensus       184 ~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (305)
                      ++|+++++|+++++.|++++||+|++|+||+++|++.......                  +..+.+   .+  ..+.++
T Consensus       160 asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~------------------~~~~~~---~~--~~~~~~  216 (253)
T 3qiv_A          160 LAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTTPK------------------EMVDDI---VK--GLPLSR  216 (253)
T ss_dssp             CCHHHHHHHHHHHHHHTTTTTEEEEEEEC---------------------------------------------------
T ss_pred             HHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcCcH------------------HHHHHH---hc--cCCCCC
Confidence            9999999999999999999999999999999999985433211                  111111   11  245678


Q ss_pred             CCCHHHHHHHHHHhccCCCCceeccEEEecCCcccc
Q 021960          264 TLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTS  299 (305)
Q Consensus       264 ~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~  299 (305)
                      +.+|+|+|+.++||+++..+++||++|.+|||..+.
T Consensus       217 ~~~~~dva~~~~~l~s~~~~~~tG~~~~vdgG~~~~  252 (253)
T 3qiv_A          217 MGTPDDLVGMCLFLLSDEASWITGQIFNVDGGQIIR  252 (253)
T ss_dssp             ---CCHHHHHHHHHHSGGGTTCCSCEEEC-------
T ss_pred             CCCHHHHHHHHHHHcCccccCCCCCEEEECCCeecC
Confidence            889999999999999999999999999999998653

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=100.00  E-value=1.3e-44  Score=319.07  Aligned_cols=234  Identities=26%  Similarity=0.325  Sum_probs=200.3

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchh-------hhHhhhc--CCCCeEEEEecCCCHHHHHHHH
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLG-------SVLASTL--APAPVTFVHCDVSLEEDIENLI   97 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~-------~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~   97 (305)
                      +++++|++|||||++|||+++|+.|+++|++|++++|+....       +...+.+  .+.++.++.+|++|.+++++++
T Consensus         2 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   81 (274)
T 3e03_A            2 LTLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAV   81 (274)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHH
Confidence            367899999999999999999999999999999999986532       1111111  2456899999999999999999


Q ss_pred             HHHHHhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccC--
Q 021960           98 NSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMG--  175 (305)
Q Consensus        98 ~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~--  175 (305)
                      +++.+.+|++|+||||||....    .++.+.+.++|++.+++|+.+++++++.++|.|.+++.++||++||..+..+  
T Consensus        82 ~~~~~~~g~iD~lvnnAG~~~~----~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~  157 (274)
T 3e03_A           82 AATVDTFGGIDILVNNASAIWL----RGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAW  157 (274)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCC----CCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHHH
T ss_pred             HHHHHHcCCCCEEEECCCcccC----CCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCCC
Confidence            9999999999999999998644    5677889999999999999999999999999999888899999999999887  


Q ss_pred             CCCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCC-ccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHH
Q 021960          176 GLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPF-GVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFV  254 (305)
Q Consensus       176 ~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG-~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (305)
                      .++...|++||+++++|+++++.|++++||+||+|+|| .++|+|... +..                            
T Consensus       158 ~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~~~~-~~~----------------------------  208 (274)
T 3e03_A          158 WGAHTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDAINM-LPG----------------------------  208 (274)
T ss_dssp             HHHCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC--------C----------------------------
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccchhhh-ccc----------------------------
Confidence            67788999999999999999999999999999999999 699998521 111                            


Q ss_pred             hhcCCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          255 SGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       255 ~~~~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                          .+..+..+|||+|+.++||+++.++++||++| +|||+..
T Consensus       209 ----~~~~~~~~pedvA~~v~~l~s~~~~~itG~~i-~~~g~~~  247 (274)
T 3e03_A          209 ----VDAAACRRPEIMADAAHAVLTREAAGFHGQFL-IDDEVLA  247 (274)
T ss_dssp             ----CCGGGSBCTHHHHHHHHHHHTSCCTTCCSCEE-EHHHHHH
T ss_pred             ----ccccccCCHHHHHHHHHHHhCccccccCCeEE-EcCcchh
Confidence                12234678999999999999999999999999 8888654

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=100.00  E-value=4e-44  Score=318.14  Aligned_cols=252  Identities=26%  Similarity=0.346  Sum_probs=202.4

Q ss_pred             eeccCCCCCCCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCc-chhhhHhhhc---CCCCeEEEEecCCC---
Q 021960           17 LAWDDAPPSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVED-TLGSVLASTL---APAPVTFVHCDVSL---   89 (305)
Q Consensus        17 ~~~~~~~~~~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~-~~~~~~~~~~---~~~~v~~~~~D~~d---   89 (305)
                      -.+...++...+|++|++|||||++|||+++|+.|+++|++|++++|+. ...+.+.+.+   .+.++.++.+|++|   
T Consensus         9 ~~~~~~~~~~~~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~   88 (288)
T 2x9g_A            9 HHSSGLVPRGSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNV   88 (288)
T ss_dssp             -------------CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTT
T ss_pred             ccccccCCCCcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccC
Confidence            3455555566678999999999999999999999999999999999987 5544443332   24568999999999   


Q ss_pred             -HHHHHHHHHHHHHhcCCccEEEEcCCCCCCCCCCCcc-----cC-----CCHHHHHHHHHHHhHHHHHHHHHHHHHHHc
Q 021960           90 -EEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSI-----ID-----FDADEFDNVMRVNVKGMALGIKHAARVMIN  158 (305)
Q Consensus        90 -~~~i~~~~~~~~~~~g~id~li~nag~~~~~~~~~~~-----~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~  158 (305)
                       .++++++++++.+.++++|+||||||....    .++     .+     .+.++|++.+++|+.+++++++.+++.|.+
T Consensus        89 ~~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~  164 (288)
T 2x9g_A           89 LPASCEEIINSCFRAFGRCDVLVNNASAFYP----TPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKG  164 (288)
T ss_dssp             HHHHHHHHHHHHHHHHSCCCEEEECCCCCCC----CCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--
T ss_pred             CHHHHHHHHHHHHHhcCCCCEEEECCCCCCC----CccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhh
Confidence             999999999999999999999999997643    334     45     788999999999999999999999999987


Q ss_pred             CC------CCEEEEecccccccCCCCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCch
Q 021960          159 RG------GGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEE  232 (305)
Q Consensus       159 ~~------~~~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~  232 (305)
                      ++      .++||++||..+..+.++...|+++|+++++|+++++.|++++||+||+|+||+++|+| . . ..      
T Consensus       165 ~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~-~-~-~~------  235 (288)
T 2x9g_A          165 TNPNCTSSNLSIVNLCDAMVDQPCMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV-A-M-GE------  235 (288)
T ss_dssp             ------CCCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT-T-S-CH------
T ss_pred             cCCCCCCCCeEEEEEecccccCCCCCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc-c-c-Ch------
Confidence            66      78999999999999999999999999999999999999999999999999999999997 2 1 00      


Q ss_pred             hhhhhccCCCcHHHHHHHHHHHhhcCCCCCCC-CCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          233 EDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT-LRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                                  +..+.   +..  ..+.+++ .+|+|+|+.++||+++.++++||++|.+|||+++
T Consensus       236 ------------~~~~~---~~~--~~p~~r~~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~  285 (288)
T 2x9g_A          236 ------------EEKDK---WRR--KVPLGRREASAEQIADAVIFLVSGSAQYITGSIIKVDGGLSL  285 (288)
T ss_dssp             ------------HHHHH---HHH--TCTTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             ------------HHHHH---HHh--hCCCCCCCCCHHHHHHHHHHHhCccccCccCCEEEECcchhh
Confidence                        11111   111  2466788 8999999999999999999999999999999865

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=100.00  E-value=5.6e-44  Score=313.78  Aligned_cols=243  Identities=26%  Similarity=0.400  Sum_probs=205.6

Q ss_pred             CCCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cCcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHH
Q 021960           25 SHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIAD-VEDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTV  101 (305)
Q Consensus        25 ~~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~-r~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~  101 (305)
                      ....+.+|++|||||++|||+++|++|+++|++|+++. |+....+...+.+  .+.++.++.+|++|.++++++++++.
T Consensus        20 ~~~~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   99 (267)
T 4iiu_A           20 FQSNAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEI   99 (267)
T ss_dssp             -----CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             hccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHH
Confidence            34567899999999999999999999999999997754 5444443333322  34578999999999999999999999


Q ss_pred             HhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-cCCCCEEEEecccccccCCCCCc
Q 021960          102 SRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMI-NRGGGCIISTASVAGVMGGLGPH  180 (305)
Q Consensus       102 ~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~~iv~isS~~~~~~~~~~~  180 (305)
                      +.++++|+||||||....    .++.+.+.++|++.+++|+.+++++++.+++.|. +++.++||++||.++..+.++..
T Consensus       100 ~~~g~id~li~nAg~~~~----~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  175 (267)
T 4iiu_A          100 AQHGAWYGVVSNAGIARD----AAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMGNRGQV  175 (267)
T ss_dssp             HHHCCCSEEEECCCCCCC----CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHCCTTCH
T ss_pred             HHhCCccEEEECCCCCCC----CccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccCCCCCc
Confidence            999999999999998654    5677889999999999999999999999988886 56779999999999999999999


Q ss_pred             cchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCC
Q 021960          181 AYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNL  260 (305)
Q Consensus       181 ~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (305)
                      .|+++|+|+++|+++++.|++++||+|++|+||+++|++....                    .+..+..   ..  ..+
T Consensus       176 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--------------------~~~~~~~---~~--~~p  230 (267)
T 4iiu_A          176 NYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEME--------------------ESALKEA---MS--MIP  230 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCC--------------------HHHHHHH---HH--TCT
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCccccc--------------------HHHHHHH---Hh--cCC
Confidence            9999999999999999999999999999999999999985321                    1111111   11  357


Q ss_pred             CCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCc
Q 021960          261 KGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGV  296 (305)
Q Consensus       261 ~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~  296 (305)
                      .+++.+|+|+|+.++||+++.++++||++|.+|||+
T Consensus       231 ~~~~~~~edva~~~~~L~s~~~~~itG~~i~vdGG~  266 (267)
T 4iiu_A          231 MKRMGQAEEVAGLASYLMSDIAGYVTRQVISINGGM  266 (267)
T ss_dssp             TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             CCCCcCHHHHHHHHHHHhCCcccCccCCEEEeCCCc
Confidence            788999999999999999999999999999999996

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=100.00  E-value=3.5e-44  Score=324.13  Aligned_cols=243  Identities=24%  Similarity=0.275  Sum_probs=207.6

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEe-cCcchhhhHhhhc---CCCCeEEEEecCCCHH------------
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIAD-VEDTLGSVLASTL---APAPVTFVHCDVSLEE------------   91 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~-r~~~~~~~~~~~~---~~~~v~~~~~D~~d~~------------   91 (305)
                      ++++|++|||||++|||+++++.|+++|++|++++ |+....+.+.+.+   .+.++.++.+|++|.+            
T Consensus        43 ~l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~  122 (328)
T 2qhx_A           43 APTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAP  122 (328)
T ss_dssp             --CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------CC
T ss_pred             ccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhccccccccccc
Confidence            37899999999999999999999999999999999 8776555444332   2456899999999999            


Q ss_pred             -----HHHHHHHHHHHhcCCccEEEEcCCCCCCCCCCCcccCCC--------------HHHHHHHHHHHhHHHHHHHHHH
Q 021960           92 -----DIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFD--------------ADEFDNVMRVNVKGMALGIKHA  152 (305)
Q Consensus        92 -----~i~~~~~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~--------------~~~~~~~~~~n~~~~~~l~~~~  152 (305)
                           +++++++++.+.++++|+||||||....    .++.+.+              .++|++.+++|+.+++++++.+
T Consensus       123 ~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~----~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~  198 (328)
T 2qhx_A          123 VTLFTRCAELVAACYTHWGRCDVLVNNASSFYP----TPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAF  198 (328)
T ss_dssp             BCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCC----CCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             cccHHHHHHHHHHHHHhcCCCCEEEECCCCCCC----CChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHH
Confidence                 9999999999999999999999997643    4566677              8999999999999999999999


Q ss_pred             HHHHHcCC------CCEEEEecccccccCCCCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccC
Q 021960          153 ARVMINRG------GGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRN  226 (305)
Q Consensus       153 ~~~~~~~~------~~~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~  226 (305)
                      ++.|.+++      .++||++||..+..+.++...|+++|++++.|+++++.|++++||+||+|+||+++|+| .. +  
T Consensus       199 ~~~m~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~-~~-~--  274 (328)
T 2qhx_A          199 AHRVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-DM-P--  274 (328)
T ss_dssp             HHHHHHSCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCC-CS-C--
T ss_pred             HHHHHhcCCcCCCCCcEEEEECchhhccCCCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCCc-cc-c--
Confidence            99998877      79999999999999999999999999999999999999999999999999999999998 21 1  


Q ss_pred             CCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCC-CCCCHHHHHHHHHHhccCCCCceeccEEEecCCccccc
Q 021960          227 SGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKG-TTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTSR  300 (305)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~~  300 (305)
                                       .+..+.   +..  ..+.+ ++.+|+|+|+.++||+++.++++||++|.+|||+++.+
T Consensus       275 -----------------~~~~~~---~~~--~~p~~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~~~  327 (328)
T 2qhx_A          275 -----------------PAVWEG---HRS--KVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLTR  327 (328)
T ss_dssp             -----------------HHHHHH---HHT--TCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCC
T ss_pred             -----------------HHHHHH---HHh--hCCCCCCCCCHHHHHHHHHHHhCccccCccCcEEEECCCcccCc
Confidence                             011111   111  24667 88899999999999999999999999999999987654

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=100.00  E-value=2.9e-44  Score=314.90  Aligned_cols=248  Identities=26%  Similarity=0.397  Sum_probs=203.3

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchh-hhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLG-SVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~-~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      ++.+|++|||||++|||+++++.|+++|++|++++|+.... +.+.+..  .+.++.++.+|++|.++++++++++.+.+
T Consensus         4 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   83 (264)
T 3i4f_A            4 GRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHF   83 (264)
T ss_dssp             --CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             ccccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence            45679999999999999999999999999999997765442 2222222  23568999999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEeccc-cc-ccCCCCCccc
Q 021960          105 GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASV-AG-VMGGLGPHAY  182 (305)
Q Consensus       105 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~-~~-~~~~~~~~~Y  182 (305)
                      +++|+||||||....  ...++.+.+.++|++.+++|+.+++++++.++|.|.+++.++||++||. .+ ..+.++...|
T Consensus        84 g~id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~Y  161 (264)
T 3i4f_A           84 GKIDFLINNAGPYVF--ERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAPGWIYRSAF  161 (264)
T ss_dssp             SCCCEEECCCCCCCC--SCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGGGCCCCTTCHHH
T ss_pred             CCCCEEEECCccccc--CCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhcccCCCCCCchh
Confidence            999999999994322  1256788899999999999999999999999999998888999999998 44 5567778999


Q ss_pred             hhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCC
Q 021960          183 TASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKG  262 (305)
Q Consensus       183 ~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (305)
                      +++|+++++|+++++.|++++||+|++|+||+++|+|.....+                   +..+...     ...+.+
T Consensus       162 ~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~-------------------~~~~~~~-----~~~p~~  217 (264)
T 3i4f_A          162 AAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEATIQ-------------------EARQLKE-----HNTPIG  217 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCCHH-------------------HHHHC-------------
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhccH-------------------HHHHHHh-----hcCCCC
Confidence            9999999999999999999999999999999999998543321                   1111111     135678


Q ss_pred             CCCCHHHHHHHHHHhccCCCCceeccEEEecCCcccccc
Q 021960          263 TTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTSRN  301 (305)
Q Consensus       263 ~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~~~  301 (305)
                      ++.+|+|+|+.++||+++..+++||++|.+|||++....
T Consensus       218 r~~~~~dva~~v~~l~s~~~~~itG~~i~vdGG~~~~~~  256 (264)
T 3i4f_A          218 RSGTGEDIARTISFLCEDDSDMITGTIIEVTGAVDVIHR  256 (264)
T ss_dssp             CCCCHHHHHHHHHHHHSGGGTTCCSCEEEESCSCCCCC-
T ss_pred             CCcCHHHHHHHHHHHcCcccCCCCCcEEEEcCceeeccC
Confidence            899999999999999999999999999999999987654

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=100.00  E-value=1.3e-43  Score=310.84  Aligned_cols=254  Identities=31%  Similarity=0.467  Sum_probs=212.0

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCC
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGR  106 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~  106 (305)
                      .++++|++|||||++|||+++++.|+++|++|++++|+....+...+.+.. ++.++.+|++|.++++++++++.+.+|+
T Consensus         8 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~D~~d~~~v~~~~~~~~~~~g~   86 (263)
T 3ak4_A            8 FDLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLEN-GGFAVEVDVTKRASVDAAMQKAIDALGG   86 (263)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTT-CCEEEECCTTCHHHHHHHHHHHHHHHTC
T ss_pred             cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc-CCeEEEEeCCCHHHHHHHHHHHHHHcCC
Confidence            357899999999999999999999999999999999987665555444332 5788999999999999999999999999


Q ss_pred             ccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-CCEEEEecccccccCCCCCccchhh
Q 021960          107 LDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRG-GGCIISTASVAGVMGGLGPHAYTAS  185 (305)
Q Consensus       107 id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~~s  185 (305)
                      +|+||||||....    .++.+.+.++|++.+++|+.+++++++.+++.|.+++ .++||++||..+..+.++...|+++
T Consensus        87 iD~lv~~Ag~~~~----~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  162 (263)
T 3ak4_A           87 FDLLCANAGVSTM----RPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGAPLLAHYSAS  162 (263)
T ss_dssp             CCEEEECCCCCCC----CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             CCEEEECCCcCCC----CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccCCCCchhHHHH
Confidence            9999999997643    5677889999999999999999999999999998877 7999999999999998999999999


Q ss_pred             HHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCC
Q 021960          186 KHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL  265 (305)
Q Consensus       186 Kaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (305)
                      |++++.|+++++.|++++||+|++|+||+++|++.......        .....+...++..+.   +..  ..+.+++.
T Consensus       163 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~--------~~~~~~~~~~~~~~~---~~~--~~p~~~~~  229 (263)
T 3ak4_A          163 KFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIW--------EAELRGMTPEAVRAE---YVS--LTPLGRIE  229 (263)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHHHHHHH--------HHHHHTSCHHHHHHH---HHH--TCTTCSCB
T ss_pred             HHHHHHHHHHHHHHHhHcCeEEEEEecccccChhhhhhccc--------cccccccCcHHHHHH---HHh--cCCCCCCc
Confidence            99999999999999999999999999999999985432100        000000000111111   111  25678899


Q ss_pred             CHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          266 RSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       266 ~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      +|+|+|+.++||+++.+++++|++|.+|||++.
T Consensus       230 ~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~~~  262 (263)
T 3ak4_A          230 EPEDVADVVVFLASDAARFMTGQGINVTGGVRM  262 (263)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESSSSSC
T ss_pred             CHHHHHHHHHHHhCccccCCCCCEEEECcCEeC
Confidence            999999999999999889999999999999764

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=100.00  E-value=1.8e-44  Score=314.11  Aligned_cols=234  Identities=23%  Similarity=0.271  Sum_probs=197.9

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc-----CCCCeEEEEecCCCHHHHHHHHHHHH
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL-----APAPVTFVHCDVSLEEDIENLINSTV  101 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~-----~~~~v~~~~~D~~d~~~i~~~~~~~~  101 (305)
                      .++++|++|||||++|||+++|+.|+++|++|++++|+....+...+.+     ...++.++.+|++|.++++++++++.
T Consensus         3 ~~~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   82 (250)
T 3nyw_A            3 LEKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIH   82 (250)
T ss_dssp             --CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999877665554433     22568899999999999999999999


Q ss_pred             HhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCcc
Q 021960          102 SRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHA  181 (305)
Q Consensus       102 ~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~  181 (305)
                      +.++++|+||||||....    .++ +.+.++|++.+++|+.+++++++.++|.|.+++.|+||++||.++..+.+....
T Consensus        83 ~~~g~iD~lvnnAg~~~~----~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  157 (250)
T 3nyw_A           83 QKYGAVDILVNAAAMFMD----GSL-SEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYGFADGGI  157 (250)
T ss_dssp             HHHCCEEEEEECCCCCCC----CCC-SCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC-------CCTTH
T ss_pred             HhcCCCCEEEECCCcCCC----CCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcCCCCCCcc
Confidence            999999999999998644    345 678899999999999999999999999999888899999999999997777899


Q ss_pred             chhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCC
Q 021960          182 YTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLK  261 (305)
Q Consensus       182 Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (305)
                      |+++|+++++|+++++.|++++||+||+|+||+++|+|.......                                .+.
T Consensus       158 Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~--------------------------------~~~  205 (250)
T 3nyw_A          158 YGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDMAKKAGTP--------------------------------FKD  205 (250)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHTTCC--------------------------------SCG
T ss_pred             hHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCchhhhcCCC--------------------------------ccc
Confidence            999999999999999999999999999999999999986543211                                234


Q ss_pred             CCCCCHHHHHHHHHHhccCCCC-ceeccEEEecCCcc
Q 021960          262 GTTLRSKDIAEAALYLASDESR-YVSGHNLVVDGGVT  297 (305)
Q Consensus       262 ~~~~~~~dva~~v~~l~s~~~~-~~tG~~i~idgG~~  297 (305)
                      +++++|+|+|+.++||+++... ++++.+|.+|||..
T Consensus       206 ~~~~~p~dva~~v~~l~s~~~~~~~~~~~i~vd~~~~  242 (250)
T 3nyw_A          206 EEMIQPDDLLNTIRCLLNLSENVCIKDIVFEMKKSII  242 (250)
T ss_dssp             GGSBCHHHHHHHHHHHHTSCTTEECCEEEEEEHHHHH
T ss_pred             ccCCCHHHHHHHHHHHHcCCCceEeeEEEEEeecccc
Confidence            5678999999999999996544 68888999999953

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=100.00  E-value=1.1e-43  Score=309.78  Aligned_cols=252  Identities=29%  Similarity=0.425  Sum_probs=208.4

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc-CCCCeEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 021960           29 LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL-APAPVTFVHCDVSLEEDIENLINSTVSRYGRL  107 (305)
Q Consensus        29 l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~-~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~i  107 (305)
                      |++|++|||||++|||+++++.|+++|++|++++|+.. .+...+.. .+.++.++.+|++|.++++++++++.+.++++
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   80 (255)
T 2q2v_A            2 LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP-APALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFGGV   80 (255)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC-HHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHSSC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch-HHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            67899999999999999999999999999999999765 22111111 24568899999999999999999999999999


Q ss_pred             cEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhHH
Q 021960          108 DILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKH  187 (305)
Q Consensus       108 d~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKa  187 (305)
                      |+||||||....    .++.+.+.++|++.+++|+.+++++++.++|.|.+++.++||++||.++..+.++...|+++|+
T Consensus        81 d~lv~~Ag~~~~----~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  156 (255)
T 2q2v_A           81 DILVNNAGIQHV----APVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVGSTGKAAYVAAKH  156 (255)
T ss_dssp             SEEEECCCCCCC----BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred             CEEEECCCCCCC----CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhccCCCCchhHHHHHH
Confidence            999999997643    5677889999999999999999999999999998888899999999999999899999999999


Q ss_pred             HHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCCH
Q 021960          188 AIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRS  267 (305)
Q Consensus       188 a~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (305)
                      ++++|+++++.|++++||+||+|+||+++|++.......      .   ......   .......+... ..+.+++.+|
T Consensus       157 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~------~---~~~~~~---~~~~~~~~~~~-~~p~~~~~~~  223 (255)
T 2q2v_A          157 GVVGLTKVVGLETATSNVTCNAICPGWVLTPLVQKQIDD------R---AANGGD---PLQAQHDLLAE-KQPSLAFVTP  223 (255)
T ss_dssp             HHHHHHHHHHHHTTTSSEEEEEEEESSBCCHHHHHHHHH------H---HHHTCC---HHHHHHHHHTT-TCTTCCCBCH
T ss_pred             HHHHHHHHHHHHhcccCcEEEEEeeCCCcCcchhhhccc------c---cccccc---hHHHHHHHHhc-cCCCCCCcCH
Confidence            999999999999999999999999999999985432100      0   000000   00000111011 3567889999


Q ss_pred             HHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          268 KDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       268 ~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      +|+|+.++||++++.++++|++|.+|||++.
T Consensus       224 ~dvA~~~~~l~s~~~~~~tG~~~~vdgG~~~  254 (255)
T 2q2v_A          224 EHLGELVLFLCSEAGSQVRGAAWNVDGGWLA  254 (255)
T ss_dssp             HHHHHHHHHHTSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHHHHHhCCccCCCCCCEEEECCCccC
Confidence            9999999999999889999999999999764

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=100.00  E-value=3.4e-44  Score=312.78  Aligned_cols=245  Identities=35%  Similarity=0.509  Sum_probs=210.4

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRL  107 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~i  107 (305)
                      ++++|++|||||++|||+++++.|+++|++|++++|+....+...+.+ +.++.++.+|++|.++++++++++.+.++++
T Consensus         3 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   81 (253)
T 1hxh_A            3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL-GERSMFVRHDVSSEADWTLVMAAVQRRLGTL   81 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH-CTTEEEECCCTTCHHHHHHHHHHHHHHHCSC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-CCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            578999999999999999999999999999999999876665554444 4568899999999999999999999999999


Q ss_pred             cEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhHH
Q 021960          108 DILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKH  187 (305)
Q Consensus       108 d~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKa  187 (305)
                      |+||||||....    .++.+.+.++|++.+++|+.+++++++.++|.|.+++ ++||++||..+..+.++...|+++|+
T Consensus        82 d~lv~~Ag~~~~----~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~~sK~  156 (253)
T 1hxh_A           82 NVLVNNAGILLP----GDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWLPIEQYAGYSASKA  156 (253)
T ss_dssp             CEEEECCCCCCC----BCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred             CEEEECCCCCCC----CCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC-CEEEEEcchhhcCCCCCCccHHHHHH
Confidence            999999997643    5677889999999999999999999999999998777 99999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCcC--CcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHh-hcCCCCCCC
Q 021960          188 AIVGLTKNAACELGRY--GIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVS-GLGNLKGTT  264 (305)
Q Consensus       188 a~~~~~~~la~e~~~~--~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  264 (305)
                      ++++|+++++.|++++  ||+||+|+||+++|++.......   ..           .+    ..  +.. ....+.+++
T Consensus       157 a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~---~~-----------~~----~~--~~~~~~~~p~~~~  216 (253)
T 1hxh_A          157 AVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPK---GV-----------SK----EM--VLHDPKLNRAGRA  216 (253)
T ss_dssp             HHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCT---TC-----------CH----HH--HBCBTTTBTTCCE
T ss_pred             HHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchhhhccch---hh-----------hH----HH--HhhhhccCccCCC
Confidence            9999999999999888  99999999999999986542111   00           00    00  000 001356788


Q ss_pred             CCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          265 LRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       265 ~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      .+|+|+|+.++||+++.+++++|++|.+|||++.
T Consensus       217 ~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG~~~  250 (253)
T 1hxh_A          217 YMPERIAQLVLFLASDESSVMSGSELHADNSILG  250 (253)
T ss_dssp             ECHHHHHHHHHHHHSGGGTTCCSCEEEESSSCTT
T ss_pred             CCHHHHHHHHHHHcCccccCCCCcEEEECCCccc
Confidence            8999999999999999999999999999999754

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=100.00  E-value=3.3e-44  Score=315.38  Aligned_cols=253  Identities=19%  Similarity=0.215  Sum_probs=206.0

Q ss_pred             CCCCCCCCCEEEEecCC--CchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc-CCCCeEEEEecCCCHHHHHHHHHHH
Q 021960           24 PSHRRLEGKVAIITGGA--RGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL-APAPVTFVHCDVSLEEDIENLINST  100 (305)
Q Consensus        24 ~~~~~l~~k~vlVtGas--~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~-~~~~v~~~~~D~~d~~~i~~~~~~~  100 (305)
                      +....+++|++|||||+  +|||+++|+.|+++|++|++++|++...+.+.+.. ...++.++.+|++|.++++++++++
T Consensus         7 ~~~~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   86 (271)
T 3ek2_A            7 HHMGFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASL   86 (271)
T ss_dssp             --CCTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHH
T ss_pred             CCccccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHH
Confidence            34457789999999999  99999999999999999999998855444333221 1234788999999999999999999


Q ss_pred             HHhcCCccEEEEcCCCCCCCCCCCcccC-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCC
Q 021960          101 VSRYGRLDILYNNAGVLGNQRKHKSIID-FDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGP  179 (305)
Q Consensus       101 ~~~~g~id~li~nag~~~~~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~  179 (305)
                      .+.++++|+||||||.........++.+ .+.++|++.+++|+.+++++++.+++.|.+  .++||++||.++..+.++.
T Consensus        87 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~  164 (271)
T 3ek2_A           87 KTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSD--DASLLTLSYLGAERAIPNY  164 (271)
T ss_dssp             HHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEE--EEEEEEEECGGGTSBCTTT
T ss_pred             HHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhcc--CceEEEEeccccccCCCCc
Confidence            9999999999999998653211134455 899999999999999999999999998854  5899999999999999999


Q ss_pred             ccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCC
Q 021960          180 HAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGN  259 (305)
Q Consensus       180 ~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (305)
                      ..|+++|+++++|+++++.|++++||+|++|+||+++|+|.......                 ++..+.   +..  ..
T Consensus       165 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~-----------------~~~~~~---~~~--~~  222 (271)
T 3ek2_A          165 NTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGIKSF-----------------GKILDF---VES--NS  222 (271)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCCHHH-----------------HHHHHH---HHH--HS
T ss_pred             cchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhcccch-----------------HHHHHH---HHh--cC
Confidence            99999999999999999999999999999999999999985432110                 111111   111  25


Q ss_pred             CCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCccccc
Q 021960          260 LKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTSR  300 (305)
Q Consensus       260 ~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~~  300 (305)
                      +.+++.+|+|+|+.++||+++.++++||++|.+|||++++.
T Consensus       223 ~~~~~~~pedva~~i~~l~s~~~~~~tG~~i~vdgG~~~~~  263 (271)
T 3ek2_A          223 PLKRNVTIEQVGNAGAFLLSDLASGVTAEVMHVDSGFNAVV  263 (271)
T ss_dssp             TTSSCCCHHHHHHHHHHHHSGGGTTCCSEEEEESTTGGGBC
T ss_pred             CcCCCCCHHHHHHHHHHHcCcccCCeeeeEEEECCCeeeeh
Confidence            77889999999999999999999999999999999998764

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.6e-44  Score=320.63  Aligned_cols=245  Identities=24%  Similarity=0.311  Sum_probs=210.7

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCC---eEEEEecCcchhhhHhhhc----CCCCeEEEEecCCCHHHHHHHHHHH
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGA---KVVIADVEDTLGSVLASTL----APAPVTFVHCDVSLEEDIENLINST  100 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~---~vv~~~r~~~~~~~~~~~~----~~~~v~~~~~D~~d~~~i~~~~~~~  100 (305)
                      ++++|++|||||++|||+++|+.|+++|+   +|++++|+....+.+.+.+    .+.++.++.+|++|.++++++++++
T Consensus        30 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~  109 (287)
T 3rku_A           30 RLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENL  109 (287)
T ss_dssp             HHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTS
T ss_pred             hcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHH
Confidence            56899999999999999999999999998   9999999877666554443    3567899999999999999999999


Q ss_pred             HHhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCc
Q 021960          101 VSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPH  180 (305)
Q Consensus       101 ~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~  180 (305)
                      .+.+|++|+||||||.....   .++.+.+.++|++.+++|+.+++++++.++|.|.+++.|+||++||.++..+.++..
T Consensus       110 ~~~~g~iD~lVnnAG~~~~~---~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~  186 (287)
T 3rku_A          110 PQEFKDIDILVNNAGKALGS---DRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAYPTGS  186 (287)
T ss_dssp             CGGGCSCCEEEECCCCCCCC---CCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCH
T ss_pred             HHhcCCCCEEEECCCcCCCC---CCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhcCCCCCCc
Confidence            99999999999999976422   567788999999999999999999999999999988899999999999999999999


Q ss_pred             cchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCC
Q 021960          181 AYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNL  260 (305)
Q Consensus       181 ~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (305)
                      .|+++|+++++|+++++.|++++||+||+|+||+++|+|....+..               . .+.   ......     
T Consensus       187 ~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~---------------~-~~~---~~~~~~-----  242 (287)
T 3rku_A          187 IYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLVRYRG---------------N-EEQ---AKNVYK-----  242 (287)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHHHHTTT---------------C-HHH---HHHHHT-----
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCccccccccC---------------c-HHH---HHHhhc-----
Confidence            9999999999999999999999999999999999999986433221               0 011   111111     


Q ss_pred             CCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCcccc
Q 021960          261 KGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTS  299 (305)
Q Consensus       261 ~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~  299 (305)
                      ....++|||+|+.++||++++.++++|+++.+|||...-
T Consensus       243 ~~~p~~pedvA~~v~~l~s~~~~~i~g~~i~v~~g~~~p  281 (287)
T 3rku_A          243 DTTPLMADDVADLIVYATSRKQNTVIADTLIFPTNQASP  281 (287)
T ss_dssp             TSCCEEHHHHHHHHHHHHTSCTTEEEEEEEEEETTEEET
T ss_pred             ccCCCCHHHHHHHHHHHhCCCCCeEecceEEeeCCCCCC
Confidence            122348999999999999999999999999999997653

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=1.4e-43  Score=311.85  Aligned_cols=247  Identities=33%  Similarity=0.545  Sum_probs=209.4

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRL  107 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~i  107 (305)
                      ++++|++|||||++|||+++++.|+++|++|++++|+....+.+.+.+.  ++.++.+|++|.++++++++++.+.++++
T Consensus         6 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   83 (270)
T 1yde_A            6 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELP--GAVFILCDVTQEDDVKTLVSETIRRFGRL   83 (270)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCT--TEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc--CCeEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999999999999999999999999999999998766655544442  37889999999999999999999999999


Q ss_pred             cEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhHH
Q 021960          108 DILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKH  187 (305)
Q Consensus       108 d~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKa  187 (305)
                      |+||||||.....   .++.+.+.++|++.+++|+.+++++++.++|.|.++ .++||++||..+..+.++...|+++|+
T Consensus        84 D~lv~nAg~~~~~---~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asKa  159 (270)
T 1yde_A           84 DCVVNNAGHHPPP---QRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS-QGNVINISSLVGAIGQAQAVPYVATKG  159 (270)
T ss_dssp             CEEEECCCCCCCC---CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCHHHHHCCTTCHHHHHHHH
T ss_pred             CEEEECCCCCCCC---CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC-CCEEEEEcCccccCCCCCCcccHHHHH
Confidence            9999999976432   467788999999999999999999999999999765 589999999999999899999999999


Q ss_pred             HHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCCH
Q 021960          188 AIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRS  267 (305)
Q Consensus       188 a~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (305)
                      ++++|+++++.|++++||+||+|+||+++|+|........              +...  ..+.....  ..|.+++.+|
T Consensus       160 a~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~~~~--------------~~~~--~~~~~~~~--~~p~~r~~~p  221 (270)
T 1yde_A          160 AVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALM--------------PDPR--ASIREGML--AQPLGRMGQP  221 (270)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTS--------------SSHH--HHHHHHHH--TSTTSSCBCH
T ss_pred             HHHHHHHHHHHHhhhhCcEEEEEEeCccccchhhhhhhcc--------------cchH--HHHHHHhh--cCCCCCCcCH
Confidence            9999999999999999999999999999999864321110              0000  11111111  3577889999


Q ss_pred             HHHHHHHHHhccCCCCceeccEEEecCCcccc
Q 021960          268 KDIAEAALYLASDESRYVSGHNLVVDGGVTTS  299 (305)
Q Consensus       268 ~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~  299 (305)
                      +|+|+.++||+++ ++++||++|.+|||+++.
T Consensus       222 ~dva~~v~~L~s~-~~~itG~~i~vdGG~~~~  252 (270)
T 1yde_A          222 AEVGAAAVFLASE-ANFCTGIELLVTGGAELG  252 (270)
T ss_dssp             HHHHHHHHHHHHH-CTTCCSCEEEESTTTTSC
T ss_pred             HHHHHHHHHHccc-CCCcCCCEEEECCCeecc
Confidence            9999999999998 789999999999998654

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=100.00  E-value=3.4e-44  Score=314.11  Aligned_cols=233  Identities=29%  Similarity=0.457  Sum_probs=202.8

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCC
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGR  106 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~  106 (305)
                      +++++|++|||||++|||+++|+.|+++|++|++++|+.....       ..++.++.+|++|.++++++++++.+.+|+
T Consensus        24 ~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-------~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   96 (260)
T 3un1_A           24 MRNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSA-------DPDIHTVAGDISKPETADRIVREGIERFGR   96 (260)
T ss_dssp             HHTTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCS-------STTEEEEESCTTSHHHHHHHHHHHHHHHSC
T ss_pred             hCcCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc-------cCceEEEEccCCCHHHHHHHHHHHHHHCCC
Confidence            3568999999999999999999999999999999999865432       235889999999999999999999999999


Q ss_pred             ccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccC--CCCCccchh
Q 021960          107 LDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMG--GLGPHAYTA  184 (305)
Q Consensus       107 id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~--~~~~~~Y~~  184 (305)
                      +|+||||||....    .++.+.+.++|++.+++|+.+++++++.++|.|.+++.++||++||..+..+  .++...|++
T Consensus        97 iD~lv~nAg~~~~----~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~~Y~~  172 (260)
T 3un1_A           97 IDSLVNNAGVFLA----KPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPMVGMPSALASL  172 (260)
T ss_dssp             CCEEEECCCCCCC----CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSCBTTCCCHHHHH
T ss_pred             CCEEEECCCCCCC----CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccCCCCCccHHHHH
Confidence            9999999998654    5678899999999999999999999999999999988999999999887644  345688999


Q ss_pred             hHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCC
Q 021960          185 SKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT  264 (305)
Q Consensus       185 sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (305)
                      ||+++++|+++++.|++++||+||+|+||+++|+|....                      ....+.    . ..|.+++
T Consensus       173 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~----------------------~~~~~~----~-~~p~~r~  225 (260)
T 3un1_A          173 TKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPAE----------------------THSTLA----G-LHPVGRM  225 (260)
T ss_dssp             HHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCGG----------------------GHHHHH----T-TSTTSSC
T ss_pred             HHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCHH----------------------HHHHHh----c-cCCCCCC
Confidence            999999999999999999999999999999999984321                      001111    1 3577899


Q ss_pred             CCHHHHHHHHHHhccCCCCceeccEEEecCCcccc
Q 021960          265 LRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTS  299 (305)
Q Consensus       265 ~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~  299 (305)
                      .+|+|+|+.++||  ..++++||++|.+|||++..
T Consensus       226 ~~~~dva~av~~L--~~~~~itG~~i~vdGG~~~~  258 (260)
T 3un1_A          226 GEIRDVVDAVLYL--EHAGFITGEILHVDGGQNAG  258 (260)
T ss_dssp             BCHHHHHHHHHHH--HHCTTCCSCEEEESTTGGGC
T ss_pred             cCHHHHHHHHHHh--cccCCCCCcEEEECCCeecc
Confidence            9999999999999  55679999999999998875

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=1.7e-43  Score=315.57  Aligned_cols=252  Identities=28%  Similarity=0.396  Sum_probs=209.9

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc--CCC---CeEEEEecCCCHHHHHHHHHHHH
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL--APA---PVTFVHCDVSLEEDIENLINSTV  101 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~--~~~---~v~~~~~D~~d~~~i~~~~~~~~  101 (305)
                      +++++|++|||||++|||+++++.|+++|++|++++|+....+...+.+  .+.   ++.++.+|++|.++++++++++.
T Consensus        22 ~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~  101 (297)
T 1xhl_A           22 ARFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTL  101 (297)
T ss_dssp             -CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999876655443332  122   68899999999999999999999


Q ss_pred             HhcCCccEEEEcCCCCCCCCCCCc--ccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCC-CC
Q 021960          102 SRYGRLDILYNNAGVLGNQRKHKS--IIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGG-LG  178 (305)
Q Consensus       102 ~~~g~id~li~nag~~~~~~~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~-~~  178 (305)
                      +.++++|+||||||....    .+  +.+.+.++|++.+++|+.+++++++.+++.|.+++ |+||++||..+..+. ++
T Consensus       102 ~~~g~iD~lvnnAG~~~~----~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g~IV~isS~~~~~~~~~~  176 (297)
T 1xhl_A          102 AKFGKIDILVNNAGANLA----DGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGPQAHSG  176 (297)
T ss_dssp             HHHSCCCEEEECCCCCCC----CSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGSSSCCTT
T ss_pred             HhcCCCCEEEECCCcCcC----CCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CEEEEEcCchhccCCCCC
Confidence            999999999999997643    34  77889999999999999999999999999998776 999999999999887 88


Q ss_pred             CccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcC
Q 021960          179 PHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLG  258 (305)
Q Consensus       179 ~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (305)
                      ...|+++|+++++|+++++.|++++||+||+|+||+++|+|.......    ...         .....+....+..  .
T Consensus       177 ~~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~----~~~---------~~~~~~~~~~~~~--~  241 (297)
T 1xhl_A          177 YPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLP----ETA---------SDKLYSFIGSRKE--C  241 (297)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCC----HHH---------HHHHHHHHHHCTT--T
T ss_pred             cchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCccccccccc----ccc---------ccchHHHHHHHHh--c
Confidence            999999999999999999999999999999999999999986432100    000         0000001111111  2


Q ss_pred             CCCCCCCCHHHHHHHHHHhccCC-CCceeccEEEecCCccc
Q 021960          259 NLKGTTLRSKDIAEAALYLASDE-SRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       259 ~~~~~~~~~~dva~~v~~l~s~~-~~~~tG~~i~idgG~~~  298 (305)
                      .|.+++.+|+|+|+.++||+++. ++++||++|.+|||++.
T Consensus       242 ~p~~r~~~pedvA~~v~~l~s~~~~~~itG~~i~vdGG~~~  282 (297)
T 1xhl_A          242 IPVGHCGKPEEIANIIVFLADRNLSSYIIGQSIVADGGSTL  282 (297)
T ss_dssp             CTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGG
T ss_pred             CCCCCCcCHHHHHHHHHHHhCCcccCCccCcEEEECCCccc
Confidence            46788999999999999999988 88999999999999865

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=9.2e-44  Score=310.28  Aligned_cols=246  Identities=23%  Similarity=0.228  Sum_probs=204.9

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHcC--CeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 021960           31 GKVAIITGGARGIGEAAVRLFARHG--AKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLD  108 (305)
Q Consensus        31 ~k~vlVtGas~giG~~ia~~l~~~g--~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id  108 (305)
                      +|++|||||++|||+++|+.|+++|  +.|++++|++...+.+.+.+ +.++.++.+|++|.++++++++++.+.+|++|
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id   80 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKY-GDRFFYVVGDITEDSVLKQLVNAAVKGHGKID   80 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHH-GGGEEEEESCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHh-CCceEEEECCCCCHHHHHHHHHHHHHhcCCcc
Confidence            6899999999999999999999985  68888999877766655544 45689999999999999999999999999999


Q ss_pred             EEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhHHH
Q 021960          109 ILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHA  188 (305)
Q Consensus       109 ~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKaa  188 (305)
                      +||||||.....   .++.+.+.++|++.+++|+.+++++++.++|.|.+++ |+||++||..+..+.++...|++||++
T Consensus        81 ~lvnnAg~~~~~---~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-g~iv~isS~~~~~~~~~~~~Y~asK~a  156 (254)
T 3kzv_A           81 SLVANAGVLEPV---QNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN-GNVVFVSSDACNMYFSSWGAYGSSKAA  156 (254)
T ss_dssp             EEEEECCCCCCC---TTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCSCCCCSSCCSHHHHHHHHH
T ss_pred             EEEECCcccCCC---CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEcCchhccCCCCcchHHHHHHH
Confidence            999999985432   5677889999999999999999999999999998765 999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCCHH
Q 021960          189 IVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSK  268 (305)
Q Consensus       189 ~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (305)
                      +++|+++++.|+  +||+||+|+||+++|+|...........          ....+..+.+..     ..+.+++.+|+
T Consensus       157 ~~~~~~~la~e~--~~i~vn~v~PG~v~t~~~~~~~~~~~~~----------~~~~~~~~~~~~-----~~~~~r~~~p~  219 (254)
T 3kzv_A          157 LNHFAMTLANEE--RQVKAIAVAPGIVDTDMQVNIRENVGPS----------SMSAEQLKMFRG-----LKENNQLLDSS  219 (254)
T ss_dssp             HHHHHHHHHHHC--TTSEEEEEECSSCCCCCSCCCCCCCCTT----------TSCHHHHHHHHH-----HHTTC----CH
T ss_pred             HHHHHHHHHhhc--cCcEEEEEeCCcccchhHHHhhcccCcc----------ccCHHHHHHHHH-----HHhcCCcCCcc
Confidence            999999999998  6899999999999999975543221000          001222222222     24678999999


Q ss_pred             HHHHHHHHhccCCC-CceeccEEEecCCccc
Q 021960          269 DIAEAALYLASDES-RYVSGHNLVVDGGVTT  298 (305)
Q Consensus       269 dva~~v~~l~s~~~-~~~tG~~i~idgG~~~  298 (305)
                      |+|+.++||+++.+ +++||++|.+|||...
T Consensus       220 dva~~v~~L~s~~~~~~itG~~i~vdg~~~~  250 (254)
T 3kzv_A          220 VPATVYAKLALHGIPDGVNGQYLSYNDPALA  250 (254)
T ss_dssp             HHHHHHHHHHHHCCCGGGTTCEEETTCGGGG
T ss_pred             cHHHHHHHHHhhcccCCCCccEEEecCcccc
Confidence            99999999999994 9999999999999754

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=100.00  E-value=1.6e-43  Score=307.98  Aligned_cols=246  Identities=30%  Similarity=0.411  Sum_probs=194.2

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRL  107 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~i  107 (305)
                      ++++|++|||||++|||+++++.|+++|++|++++|+....     .   ..+.++.+|++|.++++++++++.+.++++
T Consensus         4 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~-----~---~~~~~~~~D~~d~~~~~~~~~~~~~~~g~i   75 (250)
T 2fwm_X            4 DFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQE-----Q---YPFATEVMDVADAAQVAQVCQRLLAETERL   75 (250)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCSS-----C---CSSEEEECCTTCHHHHHHHHHHHHHHCSCC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhhh-----c---CCceEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            57899999999999999999999999999999999976421     1   127789999999999999999999999999


Q ss_pred             cEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhHH
Q 021960          108 DILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKH  187 (305)
Q Consensus       108 d~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKa  187 (305)
                      |+||||||....    .++.+.+.++|++.+++|+.+++++++.++|.|.+++.++||++||..+..+.++...|+++|+
T Consensus        76 d~lv~~Ag~~~~----~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  151 (250)
T 2fwm_X           76 DALVNAAGILRM----GATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPRIGMSAYGASKA  151 (250)
T ss_dssp             CEEEECCCCCCC----CCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             CEEEECCCcCCC----CCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCCCchHHHHHH
Confidence            999999997643    5677889999999999999999999999999998888899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCCH
Q 021960          188 AIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRS  267 (305)
Q Consensus       188 a~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (305)
                      +++.|+++++.|++++||+||+|+||+++|++.......   . +..         +..+........ ...|.+++.+|
T Consensus       152 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~---~-~~~---------~~~~~~~~~~~~-~~~p~~~~~~p  217 (250)
T 2fwm_X          152 ALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWVS---D-DAE---------EQRIRGFGEQFK-LGIPLGKIARP  217 (250)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEECCC--------------------------------------------------CH
T ss_pred             HHHHHHHHHHHHhCccCCEEEEEECCcccCccccccccC---h-hHH---------HHHHhhhhhccc-ccCCCCCCcCH
Confidence            999999999999999999999999999999985432111   0 000         000000000000 01456788899


Q ss_pred             HHHHHHHHHhccCCCCceeccEEEecCCcccc
Q 021960          268 KDIAEAALYLASDESRYVSGHNLVVDGGVTTS  299 (305)
Q Consensus       268 ~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~  299 (305)
                      +|+|+.++||+++.++++||++|.+|||+++.
T Consensus       218 ~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~~~  249 (250)
T 2fwm_X          218 QEIANTILFLASDLASHITLQDIVVDGGSTLG  249 (250)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESTTTTTT
T ss_pred             HHHHHHHHHHhCccccCCCCCEEEECCCcccC
Confidence            99999999999999899999999999998653

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=100.00  E-value=8.1e-44  Score=309.39  Aligned_cols=237  Identities=24%  Similarity=0.363  Sum_probs=198.1

Q ss_pred             CCCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           25 SHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        25 ~~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      ...++++|++|||||++|||+++++.|+++|++|++++|+....+.         +..+.+|++|.++++++++++.+.+
T Consensus         9 ~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~---------~~~~~~D~~~~~~~~~~~~~~~~~~   79 (247)
T 1uzm_A            9 AKPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKG---------LFGVEVDVTDSDAVDRAFTAVEEHQ   79 (247)
T ss_dssp             CCCCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTT---------SEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHH---------hcCeeccCCCHHHHHHHHHHHHHHc
Confidence            3456789999999999999999999999999999999997654322         2248899999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchh
Q 021960          105 GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTA  184 (305)
Q Consensus       105 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~  184 (305)
                      +++|+||||||....    .++.+.+.++|++.+++|+.+++++++.++|.|.+++.++||++||..+..+.++...|++
T Consensus        80 g~id~lv~~Ag~~~~----~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~  155 (247)
T 1uzm_A           80 GPVEVLVSNAGLSAD----AFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAA  155 (247)
T ss_dssp             SSCSEEEEECSCCC---------CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----CCHHHHH
T ss_pred             CCCCEEEECCCCCCC----CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhccCCCCChhHHH
Confidence            999999999998643    5677889999999999999999999999999998888899999999999999889999999


Q ss_pred             hHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCC
Q 021960          185 SKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT  264 (305)
Q Consensus       185 sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (305)
                      +|++++.|+++++.|++++||+||+|+||+++|++.... .                  ++..+   .+..  ..+.+++
T Consensus       156 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-~------------------~~~~~---~~~~--~~p~~~~  211 (247)
T 1uzm_A          156 SKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRAL-D------------------ERIQQ---GALQ--FIPAKRV  211 (247)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHS-C------------------HHHHH---HHGG--GCTTCSC
T ss_pred             HHHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchhhc-C------------------HHHHH---HHHh--cCCCCCC
Confidence            999999999999999999999999999999999985431 0                  01111   1111  2466788


Q ss_pred             CCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          265 LRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       265 ~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      .+|+|+|+.++||+++.+++++|++|.+|||+++
T Consensus       212 ~~~~dvA~~~~~l~s~~~~~~~G~~i~vdgG~~~  245 (247)
T 1uzm_A          212 GTPAEVAGVVSFLASEDASYISGAVIPVDGGMGM  245 (247)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTC
T ss_pred             cCHHHHHHHHHHHcCccccCCcCCEEEECCCccc
Confidence            9999999999999999889999999999999764

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=5.7e-44  Score=313.23  Aligned_cols=240  Identities=37%  Similarity=0.559  Sum_probs=205.5

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRL  107 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~i  107 (305)
                      ++++|++|||||++|||+++++.|+++|++|++++|+....+...+.+. .++.++.+|++|.++++++++++.+.++++
T Consensus         3 ~l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   81 (263)
T 2a4k_A            3 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALE-AEAIAVVADVSDPKAVEAVFAEALEEFGRL   81 (263)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCC-SSEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc-CceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            4789999999999999999999999999999999998776665554443 468899999999999999999999999999


Q ss_pred             cEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhHH
Q 021960          108 DILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKH  187 (305)
Q Consensus       108 d~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKa  187 (305)
                      |+||||||....    .++.+.+.++|++.+++|+.+++++++.+++.| ++ .++||++||..+. +.++...|+++|+
T Consensus        82 D~lvnnAg~~~~----~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~-~~-~g~iv~isS~~~~-~~~~~~~Y~asK~  154 (263)
T 2a4k_A           82 HGVAHFAGVAHS----ALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVL-EE-GGSLVLTGSVAGL-GAFGLAHYAAGKL  154 (263)
T ss_dssp             CEEEEGGGGTTT----TC----CHHHHHHHHHHHHHHHHHHHHHHHHHC-CT-TCEEEEECCCTTC-CHHHHHHHHHCSS
T ss_pred             cEEEECCCCCCC----CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH-hc-CCEEEEEecchhc-CCCCcHHHHHHHH
Confidence            999999997643    567788999999999999999999999999999 54 7899999999998 7778889999999


Q ss_pred             HHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCCH
Q 021960          188 AIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRS  267 (305)
Q Consensus       188 a~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (305)
                      ++++|+++++.|++++||+||+|+||+++|+|....                  + ++..+.+   ..  ..+.+++.+|
T Consensus       155 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~------------------~-~~~~~~~---~~--~~p~~~~~~p  210 (263)
T 2a4k_A          155 GVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGL------------------P-PWAWEQE---VG--ASPLGRAGRP  210 (263)
T ss_dssp             HHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTS------------------C-HHHHHHH---HH--TSTTCSCBCH
T ss_pred             HHHHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhhc------------------C-HHHHHHH---Hh--cCCCCCCcCH
Confidence            999999999999999999999999999999985431                  0 1111111   11  2467888999


Q ss_pred             HHHHHHHHHhccCCCCceeccEEEecCCcccc
Q 021960          268 KDIAEAALYLASDESRYVSGHNLVVDGGVTTS  299 (305)
Q Consensus       268 ~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~  299 (305)
                      +|+|+.++||++++++++||++|.+|||++..
T Consensus       211 ~dvA~~v~~l~s~~~~~~tG~~i~vdgG~~~~  242 (263)
T 2a4k_A          211 EEVAQAALFLLSEESAYITGQALYVDGGRSIV  242 (263)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESTTTTTC
T ss_pred             HHHHHHHHHHhCccccCCcCCEEEECCCcccc
Confidence            99999999999999999999999999998754

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=100.00  E-value=2e-43  Score=309.29  Aligned_cols=238  Identities=40%  Similarity=0.658  Sum_probs=208.9

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCC
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGR  106 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~  106 (305)
                      .++++|++|||||++|||+++++.|+++|++|++++|+....+...+.+. .++.++.+|++|.++++++++++.+.+|+
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   81 (260)
T 1nff_A            3 GRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELA-DAARYVHLDVTQPAQWKAAVDTAVTAFGG   81 (260)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTG-GGEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh-cCceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            35789999999999999999999999999999999998766555444332 24888999999999999999999999999


Q ss_pred             ccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhH
Q 021960          107 LDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASK  186 (305)
Q Consensus       107 id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  186 (305)
                      +|+||||||....    .++.+.+.++|++.+++|+.+++++++.+++.|.+++.++||++||..+..+.++...|+++|
T Consensus        82 iD~lv~~Ag~~~~----~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  157 (260)
T 1nff_A           82 LHVLVNNAGILNI----GTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATK  157 (260)
T ss_dssp             CCEEEECCCCCCC----BCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred             CCEEEECCCCCCC----CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcCCCCCchhHHHHH
Confidence            9999999997643    567788999999999999999999999999999888889999999999999988999999999


Q ss_pred             HHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCC
Q 021960          187 HAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLR  266 (305)
Q Consensus       187 aa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (305)
                      ++++.++++++.|++++||+||+|+||+++|++..  +..   .              .       + .  ..+.+++.+
T Consensus       158 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~--~~~---~--------------~-------~-~--~~~~~~~~~  208 (260)
T 1nff_A          158 FAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTD--WVP---E--------------D-------I-F--QTALGRAAE  208 (260)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGT--TSC---T--------------T-------C-S--CCSSSSCBC
T ss_pred             HHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCccc--cch---h--------------h-------H-H--hCccCCCCC
Confidence            99999999999999999999999999999999853  110   0              0       0 0  135678889


Q ss_pred             HHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          267 SKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       267 ~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      |+|+|+.++||+++..++++|++|.+|||.+.
T Consensus       209 ~~dvA~~v~~l~s~~~~~~~G~~~~v~gG~~~  240 (260)
T 1nff_A          209 PVEVSNLVVYLASDESSYSTGAEFVVDGGTVA  240 (260)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHHHHHHhCccccCCcCCEEEECCCeec
Confidence            99999999999999889999999999999765

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=100.00  E-value=2.6e-43  Score=308.76  Aligned_cols=235  Identities=30%  Similarity=0.356  Sum_probs=200.9

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      ..+++|++|||||++|||+++|+.|+++|++|++++|+....+...+.+  .+.++.++.+|++|.++++++++++.+.+
T Consensus        25 ~~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~  104 (262)
T 3rkr_A           25 SSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAH  104 (262)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             hccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhc
Confidence            4688999999999999999999999999999999999877665554443  34568999999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchh
Q 021960          105 GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTA  184 (305)
Q Consensus       105 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~  184 (305)
                      +++|+||||||.....   .++.+.+.++|++.+++|+.+++++++.+++.|.+++.++||++||..+..+.++...|++
T Consensus       105 g~id~lv~~Ag~~~~~---~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  181 (262)
T 3rkr_A          105 GRCDVLVNNAGVGWFG---GPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNPVADGAAYTA  181 (262)
T ss_dssp             SCCSEEEECCCCCCCS---SCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSCCCTTCHHHHH
T ss_pred             CCCCEEEECCCccCCC---CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCCchHHH
Confidence            9999999999974332   5677889999999999999999999999999999888899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCC
Q 021960          185 SKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT  264 (305)
Q Consensus       185 sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (305)
                      +|+++++|+++++.|++++||+|++|+||+++|+|.......                                .+..+.
T Consensus       182 sKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~--------------------------------~~~~~~  229 (262)
T 3rkr_A          182 SKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVGLSAK--------------------------------KSALGA  229 (262)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECCC------------------------------------------------C
T ss_pred             HHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCcccccccc--------------------------------cccccC
Confidence            999999999999999999999999999999999985432111                                233567


Q ss_pred             CCHHHHHHHHHHhccCCCCceeccEEEecCCc
Q 021960          265 LRSKDIAEAALYLASDESRYVSGHNLVVDGGV  296 (305)
Q Consensus       265 ~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~  296 (305)
                      ++|+|+|+.++||+++...+++|+++..+.|.
T Consensus       230 ~~p~dvA~~v~~l~s~~~~~~~g~~~i~p~~~  261 (262)
T 3rkr_A          230 IEPDDIADVVALLATQADQSFISEVLVRPTLK  261 (262)
T ss_dssp             CCHHHHHHHHHHHHTCCTTCCEEEEEEECCCC
T ss_pred             CCHHHHHHHHHHHhcCccccccCcEEeccccC
Confidence            79999999999999999999999999988763

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=100.00  E-value=6.5e-43  Score=306.66  Aligned_cols=248  Identities=28%  Similarity=0.452  Sum_probs=209.3

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRL  107 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~i  107 (305)
                      ++++|++|||||++|||+++++.|+++|++|++++|+...         +.++.++.+|++|.++++++++++.+.++++
T Consensus         5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~---------~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   75 (264)
T 2dtx_A            5 DLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG---------EAKYDHIECDVTNPDQVKASIDHIFKEYGSI   75 (264)
T ss_dssp             GGTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC---------SCSSEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc---------CCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999999999999999999999999999999997643         3457889999999999999999999999999


Q ss_pred             cEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhHH
Q 021960          108 DILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKH  187 (305)
Q Consensus       108 d~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKa  187 (305)
                      |+||||||....    .++.+.+.++|++.+++|+.+++++++.+++.|.+++.++||++||.++..+.++...|+++|+
T Consensus        76 D~lv~~Ag~~~~----~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  151 (264)
T 2dtx_A           76 SVLVNNAGIESY----GKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASIITKNASAYVTSKH  151 (264)
T ss_dssp             CEEEECCCCCCC----BCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred             CEEEECCCCCCC----CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccCCCCchhHHHHHH
Confidence            999999997643    5677889999999999999999999999999998888899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHH-HHHHHHHhhcCCCCCCCCC
Q 021960          188 AIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEV-RKMEEFVSGLGNLKGTTLR  266 (305)
Q Consensus       188 a~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  266 (305)
                      +++.|+++++.|+++. |+||+|+||+++|++.......           ....+ +... +....+..  ..+.+++.+
T Consensus       152 a~~~~~~~la~e~~~~-i~vn~v~PG~v~t~~~~~~~~~-----------~~~~~-~~~~~~~~~~~~~--~~p~~~~~~  216 (264)
T 2dtx_A          152 AVIGLTKSIALDYAPL-LRCNAVCPATIDTPLVRKAAEL-----------EVGSD-PMRIEKKISEWGH--EHPMQRIGK  216 (264)
T ss_dssp             HHHHHHHHHHHHHTTT-SEEEEEEECSBCSHHHHHHHHH-----------HHCSC-HHHHHHHHHHHHH--HSTTSSCBC
T ss_pred             HHHHHHHHHHHHhcCC-cEEEEEEeCCCcCcchhhhhhc-----------ccccC-chhhHHHHHHHHh--cCCCCCCcC
Confidence            9999999999999988 9999999999999985432100           00000 1000 01111111  146678999


Q ss_pred             HHHHHHHHHHhccCCCCceeccEEEecCCcccccccc
Q 021960          267 SKDIAEAALYLASDESRYVSGHNLVVDGGVTTSRNCV  303 (305)
Q Consensus       267 ~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~~~~~  303 (305)
                      |+|+|+.++||+++++++++|++|.+|||+....+..
T Consensus       217 p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~~~~p~~  253 (264)
T 2dtx_A          217 PQEVASAVAFLASREASFITGTCLYVDGGLSIRAPIS  253 (264)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCCCCC
T ss_pred             HHHHHHHHHHHhCchhcCCCCcEEEECCCcccCCCCC
Confidence            9999999999999988999999999999987765543

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=100.00  E-value=5.7e-44  Score=311.46  Aligned_cols=237  Identities=31%  Similarity=0.483  Sum_probs=197.4

Q ss_pred             CCCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           25 SHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        25 ~~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      ...++++|++|||||++|||+++++.|+++|++|++++|+....+         ++.++.+|++|.++++++++++.+.+
T Consensus        15 ~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~---------~~~~~~~Dl~d~~~v~~~~~~~~~~~   85 (253)
T 2nm0_A           15 VPRSHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPE---------GFLAVKCDITDTEQVEQAYKEIEETH   85 (253)
T ss_dssp             -----CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT---------TSEEEECCTTSHHHHHHHHHHHHHHT
T ss_pred             CccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhc---------cceEEEecCCCHHHHHHHHHHHHHHc
Confidence            334678999999999999999999999999999999999764322         26789999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchh
Q 021960          105 GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTA  184 (305)
Q Consensus       105 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~  184 (305)
                      +++|+||||||....    .++.+.+.++|++.+++|+.+++++++.+++.|.+++.++||++||..+..+.++...|++
T Consensus        86 g~iD~lv~nAg~~~~----~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~a  161 (253)
T 2nm0_A           86 GPVEVLIANAGVTKD----QLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGSAGQANYAA  161 (253)
T ss_dssp             CSCSEEEEECSCCTT----TC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCCCHHHHHHHHH
T ss_pred             CCCCEEEECCCCCCC----CChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCCcHHHHH
Confidence            999999999998643    4667788899999999999999999999999998888899999999999988888899999


Q ss_pred             hHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCC
Q 021960          185 SKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT  264 (305)
Q Consensus       185 sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (305)
                      +|++++.|+++++.|++++||+||+|+||+++|+|.... ..                  +..   ..+..  ..+.+++
T Consensus       162 sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~-~~------------------~~~---~~~~~--~~p~~~~  217 (253)
T 2nm0_A          162 SKAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTKVL-TD------------------EQR---ANIVS--QVPLGRY  217 (253)
T ss_dssp             HHHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC----------------------------CH---HHHHT--TCTTCSC
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhc-CH------------------HHH---HHHHh--cCCCCCC
Confidence            999999999999999999999999999999999985321 00                  000   01111  2466788


Q ss_pred             CCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          265 LRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       265 ~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      .+|+|+|+.++||+++++++++|++|.+|||+++
T Consensus       218 ~~p~dvA~~i~~l~s~~~~~~tG~~i~vdGG~~~  251 (253)
T 2nm0_A          218 ARPEEIAATVRFLASDDASYITGAVIPVDGGLGM  251 (253)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTC
T ss_pred             cCHHHHHHHHHHHhCccccCCcCcEEEECCcccc
Confidence            9999999999999999999999999999999865

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=100.00  E-value=3.9e-44  Score=323.13  Aligned_cols=244  Identities=32%  Similarity=0.507  Sum_probs=205.6

Q ss_pred             CCCCCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecC----------cchhhhHhhhc--CCCCeEEEEecCCCH
Q 021960           23 PPSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVE----------DTLGSVLASTL--APAPVTFVHCDVSLE   90 (305)
Q Consensus        23 ~~~~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~----------~~~~~~~~~~~--~~~~v~~~~~D~~d~   90 (305)
                      |.+...++||++|||||++|||+++|+.|+++|++|++++|+          ....+...+.+  .+.++.++.+|++|.
T Consensus        19 p~~m~~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~   98 (322)
T 3qlj_A           19 PGSMGVVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADW   98 (322)
T ss_dssp             ---CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSH
T ss_pred             CchhcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCH
Confidence            444557899999999999999999999999999999999886          33333333332  345688999999999


Q ss_pred             HHHHHHHHHHHHhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC------CCEE
Q 021960           91 EDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRG------GGCI  164 (305)
Q Consensus        91 ~~i~~~~~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~------~~~i  164 (305)
                      ++++++++++.+.+|++|+||||||....    .++.+.+.++|++.+++|+.+++++++.+.+.|.+.+      .|+|
T Consensus        99 ~~v~~~~~~~~~~~g~iD~lv~nAg~~~~----~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~I  174 (322)
T 3qlj_A           99 DQAAGLIQTAVETFGGLDVLVNNAGIVRD----RMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRI  174 (322)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEECCCCCCCC----CCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEE
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCCCCC----CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEE
Confidence            99999999999999999999999998754    5678899999999999999999999999999987532      3799


Q ss_pred             EEecccccccCCCCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcH
Q 021960          165 ISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQ  244 (305)
Q Consensus       165 v~isS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (305)
                      |++||..+..+.++...|++||+++++|+++++.|++++||+||+|+|| ++|+|....+....                
T Consensus       175 V~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~~~~~~~----------------  237 (322)
T 3qlj_A          175 INTSSGAGLQGSVGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETVFAEMM----------------  237 (322)
T ss_dssp             EEECCHHHHHCBTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCCSCCC------------------
T ss_pred             EEEcCHHHccCCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchhhhhhhh----------------
Confidence            9999999999999999999999999999999999999999999999999 99998654322200                


Q ss_pred             HHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          245 KEVRKMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                            ..     .....+.++|+|+|+.++||++++++++||++|.+|||...
T Consensus       238 ------~~-----~~~~~~~~~pedva~~v~~L~s~~~~~itG~~i~vdGG~~~  280 (322)
T 3qlj_A          238 ------AT-----QDQDFDAMAPENVSPLVVWLGSAEARDVTGKVFEVEGGKIR  280 (322)
T ss_dssp             -----------------CCTTCGGGTHHHHHHHTSGGGGGCCSCEEEEETTEEE
T ss_pred             ------hc-----cccccCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCccc
Confidence                  00     01112456899999999999999999999999999999865

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=2.8e-43  Score=311.44  Aligned_cols=255  Identities=28%  Similarity=0.379  Sum_probs=209.3

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcC--CC---CeEEEEecCCCHHHHHHHHHHHHH
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLA--PA---PVTFVHCDVSLEEDIENLINSTVS  102 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~--~~---~v~~~~~D~~d~~~i~~~~~~~~~  102 (305)
                      ++++|++|||||++|||+++++.|+++|++|++++|+....+...+.+.  +.   ++.++.+|++|.++++++++++.+
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   82 (280)
T 1xkq_A            3 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLK   82 (280)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHH
Confidence            4789999999999999999999999999999999998766554433331  22   689999999999999999999999


Q ss_pred             hcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCC-CCCcc
Q 021960          103 RYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGG-LGPHA  181 (305)
Q Consensus       103 ~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~-~~~~~  181 (305)
                      .++++|+||||||..........+.+.+.++|++.+++|+.+++++++.++|.|.+++ ++||++||..+..+. ++...
T Consensus        83 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~~  161 (280)
T 1xkq_A           83 QFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQAQPDFLY  161 (280)
T ss_dssp             HHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSSSCCCSSHH
T ss_pred             hcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC-CcEEEecCccccCCCCCcccH
Confidence            9999999999999764321111267889999999999999999999999999998766 999999999998887 88999


Q ss_pred             chhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCC
Q 021960          182 YTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLK  261 (305)
Q Consensus       182 Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (305)
                      |+++|+++++|+++++.|++++||+||+|+||+++|+|.......    ...         .....+....+..  ..|.
T Consensus       162 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~----~~~---------~~~~~~~~~~~~~--~~p~  226 (280)
T 1xkq_A          162 YAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMP----DQA---------SQKFYNFMASHKE--CIPI  226 (280)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCC----HHH---------HHHHHHHHHHCTT--TCTT
T ss_pred             HHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcccccccc----ccc---------ccchHHHHHHHHc--CCCC
Confidence            999999999999999999999999999999999999985432100    000         0000011111111  2467


Q ss_pred             CCCCCHHHHHHHHHHhccCC-CCceeccEEEecCCccc
Q 021960          262 GTTLRSKDIAEAALYLASDE-SRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       262 ~~~~~~~dva~~v~~l~s~~-~~~~tG~~i~idgG~~~  298 (305)
                      +++.+|+|+|+.++||+++. ++++||++|.+|||+++
T Consensus       227 ~~~~~pedvA~~v~~l~s~~~~~~~tG~~i~vdgG~~~  264 (280)
T 1xkq_A          227 GAAGKPEHIANIILFLADRNLSFYILGQSIVADGGTSL  264 (280)
T ss_dssp             SSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGG
T ss_pred             CCCCCHHHHHHHHHHhcCcccccCccCCeEEECCCccc
Confidence            88999999999999999988 88999999999999865

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=100.00  E-value=2.3e-43  Score=310.24  Aligned_cols=255  Identities=20%  Similarity=0.250  Sum_probs=206.6

Q ss_pred             CCCCCCEEEEecC--CCchHHHHHHHHHHcCCeEEEEecCcch-hhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHh
Q 021960           27 RRLEGKVAIITGG--ARGIGEAAVRLFARHGAKVVIADVEDTL-GSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSR  103 (305)
Q Consensus        27 ~~l~~k~vlVtGa--s~giG~~ia~~l~~~g~~vv~~~r~~~~-~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~  103 (305)
                      .++++|++|||||  ++|||+++++.|+++|++|++++|+... .+.+.+.+ +.++.++.+|++|.++++++++++.+.
T Consensus         3 ~~l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~   81 (269)
T 2h7i_A            3 GLLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRL-PAKAPLLELDVQNEEHLASLAGRVTEA   81 (269)
T ss_dssp             CTTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTS-SSCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhc-CCCceEEEccCCCHHHHHHHHHHHHHH
Confidence            3578999999999  9999999999999999999999998754 24443333 345788999999999999999999999


Q ss_pred             cC---CccEEEEcCCCCCCCC-CCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCC
Q 021960          104 YG---RLDILYNNAGVLGNQR-KHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGP  179 (305)
Q Consensus       104 ~g---~id~li~nag~~~~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~  179 (305)
                      +|   ++|+||||||...... ...++.+.+.++|++.+++|+.+++++++.++|.|.+  .|+||++||..+ .+.+..
T Consensus        82 ~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~iss~~~-~~~~~~  158 (269)
T 2h7i_A           82 IGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNP--GGSIVGMDFDPS-RAMPAY  158 (269)
T ss_dssp             HCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEECCCS-SCCTTT
T ss_pred             hCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhcc--CCeEEEEcCccc-cccCch
Confidence            99   9999999999764100 0146778899999999999999999999999999854  379999999876 677788


Q ss_pred             ccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHH-HHHHhhcC
Q 021960          180 HAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKM-EEFVSGLG  258 (305)
Q Consensus       180 ~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  258 (305)
                      ..|+++|+++++|+++++.|++++||+||+|+||+++|+|....+.....+ +.          .+..+.. ..+..  .
T Consensus       159 ~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~-~~----------~~~~~~~~~~~~~--~  225 (269)
T 2h7i_A          159 NWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGE-EA----------GAQIQLLEEGWDQ--R  225 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCH-HH----------HHHHHHHHHHHHH--H
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhccccccchh-hH----------HHHHHHHHHhhhc--c
Confidence            999999999999999999999999999999999999999865432110000 00          0001111 11111  2


Q ss_pred             CCCC-CCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          259 NLKG-TTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       259 ~~~~-~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      .|.+ ++.+|+|+|+.++||+|+.++++||++|.+|||++.
T Consensus       226 ~p~~rr~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~~  266 (269)
T 2h7i_A          226 APIGWNMKDATPVAKTVCALLSDWLPATTGDIIYADGGAHT  266 (269)
T ss_dssp             CTTCCCTTCCHHHHHHHHHHHSSSCTTCCSEEEEESTTGGG
T ss_pred             CCcccCCCCHHHHHHHHHHHhCchhccCcceEEEecCCeee
Confidence            5677 689999999999999999999999999999999865

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=100.00  E-value=2.9e-43  Score=305.51  Aligned_cols=232  Identities=28%  Similarity=0.389  Sum_probs=203.7

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc---CCCCeEEEEecC--CCHHHHHHHHHHH
Q 021960           26 HRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL---APAPVTFVHCDV--SLEEDIENLINST  100 (305)
Q Consensus        26 ~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~---~~~~v~~~~~D~--~d~~~i~~~~~~~  100 (305)
                      ...+++|++|||||++|||+++++.|+++|++|++++|+....+...+.+   ...++.++.+|+  +|.++++++++++
T Consensus         9 ~~~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~   88 (247)
T 3i1j_A            9 PELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARV   88 (247)
T ss_dssp             TTTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHH
T ss_pred             CccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHH
Confidence            45688999999999999999999999999999999999877666554433   224567777777  9999999999999


Q ss_pred             HHhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCc
Q 021960          101 VSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPH  180 (305)
Q Consensus       101 ~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~  180 (305)
                      .+.++++|+||||||.....   .++.+.+.++|++.+++|+.+++++++.++|.|.+++.++||++||..+..+.++..
T Consensus        89 ~~~~g~id~lv~nAg~~~~~---~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~  165 (247)
T 3i1j_A           89 EHEFGRLDGLLHNASIIGPR---TPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKGRANWG  165 (247)
T ss_dssp             HHHHSCCSEEEECCCCCCCC---SCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTSCCTTCH
T ss_pred             HHhCCCCCEEEECCccCCCC---CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcCCCCCcc
Confidence            99999999999999986432   567889999999999999999999999999999888889999999999999999999


Q ss_pred             cchhhHHHHHHHHHHHHHHHCc-CCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCC
Q 021960          181 AYTASKHAIVGLTKNAACELGR-YGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGN  259 (305)
Q Consensus       181 ~Y~~sKaa~~~~~~~la~e~~~-~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (305)
                      .|+++|+++++|+++++.|+++ ++|+||+|+||+++|+|....++.                                .
T Consensus       166 ~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~~~~~~~~--------------------------------~  213 (247)
T 3i1j_A          166 AYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTGMRAQAYPD--------------------------------E  213 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHHHHHHSTT--------------------------------S
T ss_pred             hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCccchhcccc--------------------------------c
Confidence            9999999999999999999976 899999999999999986544322                                1


Q ss_pred             CCCCCCCHHHHHHHHHHhccCCCCceeccEEEe
Q 021960          260 LKGTTLRSKDIAEAALYLASDESRYVSGHNLVV  292 (305)
Q Consensus       260 ~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~i  292 (305)
                      ...+..+|+|+|+.++||++++++++||++|.+
T Consensus       214 ~~~~~~~p~dva~~~~~l~s~~~~~itG~~i~~  246 (247)
T 3i1j_A          214 NPLNNPAPEDIMPVYLYLMGPDSTGINGQALNA  246 (247)
T ss_dssp             CGGGSCCGGGGTHHHHHHHSGGGTTCCSCEEEC
T ss_pred             CccCCCCHHHHHHHHHHHhCchhccccCeeecC
Confidence            113456899999999999999999999999986

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.5e-43  Score=309.21  Aligned_cols=241  Identities=24%  Similarity=0.357  Sum_probs=197.5

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhcCC
Q 021960           29 LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRYGR  106 (305)
Q Consensus        29 l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~  106 (305)
                      +++|++|||||++|||+++|+.|+++|++|++++|+....+.+.+.+  .+.++.++.+|++|.++++++++++.+.+|+
T Consensus         2 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   81 (264)
T 3tfo_A            2 VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGR   81 (264)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            46899999999999999999999999999999999877766554443  3456889999999999999999999999999


Q ss_pred             ccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhH
Q 021960          107 LDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASK  186 (305)
Q Consensus       107 id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  186 (305)
                      +|+||||||....    .++.+.+.++|++.+++|+.+++++++.++|.|.+++.|+||++||.++..+.++...|++||
T Consensus        82 iD~lVnnAG~~~~----~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y~asK  157 (264)
T 3tfo_A           82 IDVLVNNAGVMPL----SPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSVVPTAAVYCATK  157 (264)
T ss_dssp             CCEEEECCCCCCC----CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHH
T ss_pred             CCEEEECCCCCCC----CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHcccCCCChhHHHHH
Confidence            9999999998643    678889999999999999999999999999999988889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCC
Q 021960          187 HAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLR  266 (305)
Q Consensus       187 aa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (305)
                      +++++|+++++.|+ + ||+||+|+||+++|+|.......                  +......       ...+..++
T Consensus       158 aal~~l~~~la~e~-~-gIrvn~v~PG~v~T~~~~~~~~~------------------~~~~~~~-------~~~~~~~~  210 (264)
T 3tfo_A          158 FAVRAISDGLRQES-T-NIRVTCVNPGVVESELAGTITHE------------------ETMAAMD-------TYRAIALQ  210 (264)
T ss_dssp             HHHHHHHHHHHHHC-S-SEEEEEEEECCC------------------------------------------------CCC
T ss_pred             HHHHHHHHHHHHhC-C-CCEEEEEecCCCcCcccccccch------------------hHHHHHH-------hhhccCCC
Confidence            99999999999998 4 99999999999999986543211                  0000000       01122468


Q ss_pred             HHHHHHHHHHhccCCCCceeccEEEecCCccccc
Q 021960          267 SKDIAEAALYLASDESRYVSGHNLVVDGGVTTSR  300 (305)
Q Consensus       267 ~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~~  300 (305)
                      |+|+|+.++||+++..++++|+++..++|.....
T Consensus       211 pedvA~~v~~l~s~~~~~~~~~i~i~p~~~~~~~  244 (264)
T 3tfo_A          211 PADIARAVRQVIEAPQSVDTTEITIRPTASGNAE  244 (264)
T ss_dssp             HHHHHHHHHHHHHSCTTEEEEEEEEEECC-----
T ss_pred             HHHHHHHHHHHhcCCccCccceEEEecCcccccc
Confidence            9999999999999999999999999999987643

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=100.00  E-value=1.5e-43  Score=308.60  Aligned_cols=243  Identities=30%  Similarity=0.328  Sum_probs=205.6

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEE-ecCcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIA-DVEDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~-~r~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      .+++|++|||||++|||+++++.|+++|++|+++ .|+....+.....+  .+.++.++.+|++|.++++.+++++.+.+
T Consensus         4 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (255)
T 3icc_A            4 MLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNEL   83 (255)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHh
Confidence            4689999999999999999999999999999886 55554444433332  35568899999999999999999988765


Q ss_pred             C------CccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCC
Q 021960          105 G------RLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLG  178 (305)
Q Consensus       105 g------~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~  178 (305)
                      +      ++|+||||||....    ..+.+.+.++|++.+++|+.+++++++.++|.|  ++.++||++||..+..+.++
T Consensus        84 ~~~~~~~~id~lv~nAg~~~~----~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~--~~~~~iv~isS~~~~~~~~~  157 (255)
T 3icc_A           84 QNRTGSTKFDILINNAGIGPG----AFIEETTEQFFDRMVSVNAKAPFFIIQQALSRL--RDNSRIINISSAATRISLPD  157 (255)
T ss_dssp             HHHHSSSCEEEEEECCCCCCC----BCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTE--EEEEEEEEECCGGGTSCCTT
T ss_pred             cccccCCcccEEEECCCCCCC----CChhhCCHHHHHHHHhhhchHHHHHHHHHHHhh--CCCCEEEEeCChhhccCCCC
Confidence            3      49999999998643    567788999999999999999999999999988  34579999999999999999


Q ss_pred             CccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcC
Q 021960          179 PHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLG  258 (305)
Q Consensus       179 ~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (305)
                      ...|+++|+++++|+++++.|++++||+|++|+||+++|+|.......                 ....+.    ... .
T Consensus       158 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~-----------------~~~~~~----~~~-~  215 (255)
T 3icc_A          158 FIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLSD-----------------PMMKQY----ATT-I  215 (255)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTTTS-----------------HHHHHH----HHH-T
T ss_pred             cchhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhccc-----------------HHHHHh----hhc-c
Confidence            999999999999999999999999999999999999999996543221                 111111    111 3


Q ss_pred             CCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          259 NLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       259 ~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      .+.+++.+|+|+|+.++||+++..+++||++|.+|||+++
T Consensus       216 ~~~~~~~~~~dva~~~~~l~s~~~~~~tG~~i~vdgG~~l  255 (255)
T 3icc_A          216 SAFNRLGEVEDIADTAAFLASPDSRWVTGQLIDVSGGSCL  255 (255)
T ss_dssp             STTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSTTC
T ss_pred             CCcCCCCCHHHHHHHHHHHhCcccCCccCCEEEecCCeeC
Confidence            5678899999999999999999999999999999999863

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=100.00  E-value=4.1e-43  Score=305.87  Aligned_cols=237  Identities=19%  Similarity=0.199  Sum_probs=192.0

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      .++++|++|||||++|||+++|+.|+++|++|++++|+....+.+.+.+  .+.++.++.+|++|.++++++++++.+. 
T Consensus         3 ~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-   81 (252)
T 3h7a_A            3 LTPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAH-   81 (252)
T ss_dssp             --CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH-
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhh-
Confidence            4678999999999999999999999999999999999887766655444  2457899999999999999999999999 


Q ss_pred             CCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchh
Q 021960          105 GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTA  184 (305)
Q Consensus       105 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~  184 (305)
                      +++|+||||||....    .++.+.+.++|++.+++|+.+++++++.++|.|.+++.|+||++||..+..+.++...|++
T Consensus        82 g~id~lv~nAg~~~~----~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  157 (252)
T 3h7a_A           82 APLEVTIFNVGANVN----FPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLRGGSGFAAFAS  157 (252)
T ss_dssp             SCEEEEEECCCCCCC----CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTCCCTTCHHHHH
T ss_pred             CCceEEEECCCcCCC----CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcCCCCCCccHHH
Confidence            999999999998653    5778899999999999999999999999999999888899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCcCCcEE-EEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCC
Q 021960          185 SKHAIVGLTKNAACELGRYGIRV-NCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGT  263 (305)
Q Consensus       185 sKaa~~~~~~~la~e~~~~~i~v-~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (305)
                      ||+++++|+++++.|++++||+| |+|+||+++|+|.....+..                   .+...   .  ..+.+ 
T Consensus       158 sKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~~~~~-------------------~~~~~---~--~~~~~-  212 (252)
T 3h7a_A          158 AKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRERREQM-------------------FGKDA---L--ANPDL-  212 (252)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEEC---------------------------------------------------
T ss_pred             HHHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhccchhh-------------------hhhhh---h--cCCcc-
Confidence            99999999999999999999999 99999999999865432210                   00010   0  13445 


Q ss_pred             CCCHHHHHHHHHHhccCCCCceeccEEEec
Q 021960          264 TLRSKDIAEAALYLASDESRYVSGHNLVVD  293 (305)
Q Consensus       264 ~~~~~dva~~v~~l~s~~~~~~tG~~i~id  293 (305)
                      +.+|+|+|+.++||+++...+++|++..-.
T Consensus       213 ~~~pedvA~~~~~l~s~~~~~~~~~i~~~~  242 (252)
T 3h7a_A          213 LMPPAAVAGAYWQLYQQPKSAWTFEMEIRP  242 (252)
T ss_dssp             -CCHHHHHHHHHHHHHCCGGGBCSEEEEBC
T ss_pred             CCCHHHHHHHHHHHHhCchhcceeeEEeee
Confidence            889999999999999988888999876543

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=100.00  E-value=2.5e-43  Score=310.92  Aligned_cols=242  Identities=28%  Similarity=0.374  Sum_probs=199.7

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEec-CcchhhhHhhhcC---CCCeEEEEecCCCH----HHHHHHHHH
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADV-EDTLGSVLASTLA---PAPVTFVHCDVSLE----EDIENLINS   99 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r-~~~~~~~~~~~~~---~~~v~~~~~D~~d~----~~i~~~~~~   99 (305)
                      +|++|++|||||++|||+++++.|+++|++|++++| +....+.+.+.+.   +.++.++.+|++|.    +++++++++
T Consensus         8 ~~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   87 (276)
T 1mxh_A            8 ASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDC   87 (276)
T ss_dssp             ---CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHH
Confidence            568899999999999999999999999999999999 6655544433331   45689999999999    999999999


Q ss_pred             HHHhcCCccEEEEcCCCCCCCCCCCcccCCCH-----------HHHHHHHHHHhHHHHHHHHHHHHHHHcCCC------C
Q 021960          100 TVSRYGRLDILYNNAGVLGNQRKHKSIIDFDA-----------DEFDNVMRVNVKGMALGIKHAARVMINRGG------G  162 (305)
Q Consensus       100 ~~~~~g~id~li~nag~~~~~~~~~~~~~~~~-----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~------~  162 (305)
                      +.+.++++|+||||||....    .++.+.+.           ++|++.+++|+.+++++++.+++.|. ++.      +
T Consensus        88 ~~~~~g~id~lv~nAg~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-~~~~~~~~~g  162 (276)
T 1mxh_A           88 SFRAFGRCDVLVNNASAYYP----TPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQG-EGGAWRSRNL  162 (276)
T ss_dssp             HHHHHSCCCEEEECCCCCCC----CCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC--------CCCE
T ss_pred             HHHhcCCCCEEEECCCCCCC----CCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHh-cCCCCCCCCc
Confidence            99999999999999997643    45666777           99999999999999999999999987 555      8


Q ss_pred             EEEEecccccccCCCCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCC
Q 021960          163 CIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIP  242 (305)
Q Consensus       163 ~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~  242 (305)
                      +||++||..+..+.++...|+++|+++++|+++++.|++++||+||+|+||+++|+  .. +.                 
T Consensus       163 ~iv~isS~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~--~~-~~-----------------  222 (276)
T 1mxh_A          163 SVVNLCDAMTDLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP--PA-MP-----------------  222 (276)
T ss_dssp             EEEEECCGGGGSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC--SS-SC-----------------
T ss_pred             EEEEECchhhcCCCCCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC--cc-CC-----------------
Confidence            99999999999999999999999999999999999999999999999999999998  11 10                 


Q ss_pred             cHHHHHHHHHHHhhcCCCCCC-CCCHHHHHHHHHHhccCCCCceeccEEEecCCccccc
Q 021960          243 SQKEVRKMEEFVSGLGNLKGT-TLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTSR  300 (305)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~-~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~~  300 (305)
                       ++..+.   +..  ..+.++ +.+|+|+|+.++||+++..+++||++|.+|||+++.+
T Consensus       223 -~~~~~~---~~~--~~p~~r~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~~~~  275 (276)
T 1mxh_A          223 -QETQEE---YRR--KVPLGQSEASAAQIADAIAFLVSKDAGYITGTTLKVDGGLILAR  275 (276)
T ss_dssp             -HHHHHH---HHT--TCTTTSCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCC
T ss_pred             -HHHHHH---HHh--cCCCCCCCCCHHHHHHHHHHHhCccccCccCcEEEECCchhccC
Confidence             111111   111  245677 8899999999999999988999999999999987654

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=100.00  E-value=4e-43  Score=308.30  Aligned_cols=244  Identities=25%  Similarity=0.303  Sum_probs=207.9

Q ss_pred             CCCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           25 SHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        25 ~~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      +...+.+|++|||||++|||+++|+.|+++|++|++++|+....+..    ...++.++.+|++|.++++++++++.+.+
T Consensus        10 m~~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~----~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   85 (266)
T 3p19_A           10 MGRGSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKAL----NLPNTLCAQVDVTDKYTFDTAITRAEKIY   85 (266)
T ss_dssp             -----CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTT----CCTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHh----hcCCceEEEecCCCHHHHHHHHHHHHHHC
Confidence            34467899999999999999999999999999999999986554332    23368899999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchh
Q 021960          105 GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTA  184 (305)
Q Consensus       105 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~  184 (305)
                      |++|+||||||....    .++.+.+.++|++.+++|+.+++++++.+++.|.+++.|+||++||.++..+.++...|++
T Consensus        86 g~iD~lvnnAg~~~~----~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~a  161 (266)
T 3p19_A           86 GPADAIVNNAGMMLL----GQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTFPDHAAYCG  161 (266)
T ss_dssp             CSEEEEEECCCCCCC----CCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHH
T ss_pred             CCCCEEEECCCcCCC----CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCCCCCCCchHHH
Confidence            999999999998644    5677889999999999999999999999999999888899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCC
Q 021960          185 SKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT  264 (305)
Q Consensus       185 sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (305)
                      +|+++++|+++++.|++++||+||+|+||+++|++......                  .+........    ..+.+++
T Consensus       162 sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~------------------~~~~~~~~~~----~~~~~r~  219 (266)
T 3p19_A          162 TKFAVHAISENVREEVAASNVRVMTIAPSAVKTELLSHTTS------------------QQIKDGYDAW----RVDMGGV  219 (266)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCSC------------------HHHHHHHHHH----HHHTTCC
T ss_pred             HHHHHHHHHHHHHHHhcccCcEEEEEeeCccccchhhcccc------------------hhhhHHHHhh----cccccCC
Confidence            99999999999999999999999999999999998654311                  1111111111    1256889


Q ss_pred             CCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          265 LRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       265 ~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      ++|+|+|+.++||+++...+++++++..+.+...
T Consensus       220 ~~pedvA~av~~l~~~~~~~~~~~i~i~p~~~~~  253 (266)
T 3p19_A          220 LAADDVARAVLFAYQQPQNVCIREIALAPTKQQP  253 (266)
T ss_dssp             BCHHHHHHHHHHHHHSCTTEEEEEEEEEETTCCC
T ss_pred             CCHHHHHHHHHHHHcCCCCccceeeEEecCCCCC
Confidence            9999999999999999999999999988877543

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=5.2e-43  Score=304.04  Aligned_cols=242  Identities=34%  Similarity=0.546  Sum_probs=202.7

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRL  107 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~i  107 (305)
                      ++++|++|||||++|||+++++.|+++|++|++++|+....+.+. .+  .++.++.+|++|.+++++    +.+.++++
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~--~~~~~~~~D~~~~~~~~~----~~~~~~~i   75 (246)
T 2ag5_A            3 RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-KY--PGIQTRVLDVTKKKQIDQ----FANEVERL   75 (246)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG-GS--TTEEEEECCTTCHHHHHH----HHHHCSCC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hc--cCceEEEeeCCCHHHHHH----HHHHhCCC
Confidence            478999999999999999999999999999999999876554443 22  258899999999999884    44556899


Q ss_pred             cEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCC-CCccchhhH
Q 021960          108 DILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGL-GPHAYTASK  186 (305)
Q Consensus       108 d~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~-~~~~Y~~sK  186 (305)
                      |+||||||....    .++.+.+.++|++.+++|+.+++++++.++|.|.+++.++||++||..+..+.+ +...|+++|
T Consensus        76 d~lv~~Ag~~~~----~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~~sK  151 (246)
T 2ag5_A           76 DVLFNVAGFVHH----GTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTK  151 (246)
T ss_dssp             SEEEECCCCCCC----BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCTTBHHHHHHH
T ss_pred             CEEEECCccCCC----CCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcCCCCCCccHHHHH
Confidence            999999997643    567788999999999999999999999999999888889999999999988877 888999999


Q ss_pred             HHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCC
Q 021960          187 HAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLR  266 (305)
Q Consensus       187 aa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (305)
                      ++++.++++++.|++++||+||+|+||+++|++....+..             ....++..+   .+..  ..+.+++.+
T Consensus       152 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-------------~~~~~~~~~---~~~~--~~~~~~~~~  213 (246)
T 2ag5_A          152 AAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQA-------------RGNPEEARN---DFLK--RQKTGRFAT  213 (246)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHH-------------SSSHHHHHH---HHHH--TCTTSSCEE
T ss_pred             HHHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchhhhhhc-------------ccCcHHHHH---HHHh--cCCCCCCCC
Confidence            9999999999999999999999999999999985432110             000011111   1111  246678899


Q ss_pred             HHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          267 SKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       267 ~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      |+|+|+.++||+++.++++||++|.+|||+++
T Consensus       214 ~~dvA~~v~~l~s~~~~~~tG~~i~vdgG~~~  245 (246)
T 2ag5_A          214 AEEIAMLCVYLASDESAYVTGNPVIIDGGWSL  245 (246)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEECTTGGG
T ss_pred             HHHHHHHHHHHhCccccCCCCCEEEECCCccC
Confidence            99999999999999999999999999999764

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=100.00  E-value=6.5e-43  Score=302.13  Aligned_cols=235  Identities=29%  Similarity=0.415  Sum_probs=202.9

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEE
Q 021960           31 GKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDIL  110 (305)
Q Consensus        31 ~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~l  110 (305)
                      +|++|||||++|||+++++.|+++|++|++++|+...   ..+.+ +  +.++.+|++| ++++++++++.+.++++|+|
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~---~~~~~-~--~~~~~~D~~~-~~~~~~~~~~~~~~g~id~l   74 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEE---AAQSL-G--AVPLPTDLEK-DDPKGLVKRALEALGGLHVL   74 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHH---HHHHH-T--CEEEECCTTT-SCHHHHHHHHHHHHTSCCEE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH---HHHhh-C--cEEEecCCch-HHHHHHHHHHHHHcCCCCEE
Confidence            6899999999999999999999999999999998654   22222 2  7789999999 99999999999999999999


Q ss_pred             EEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCC--CCCccchhhHHH
Q 021960          111 YNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGG--LGPHAYTASKHA  188 (305)
Q Consensus       111 i~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~--~~~~~Y~~sKaa  188 (305)
                      |||||....    .++.+.+.++|++.+++|+.+++++++.++|.|.+++.++||++||..+..+.  ++...|+++|++
T Consensus        75 v~~Ag~~~~----~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~~sK~a  150 (239)
T 2ekp_A           75 VHAAAVNVR----KPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAGGPVPIPAYTTAKTA  150 (239)
T ss_dssp             EECCCCCCC----CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTSCCHHHHHHHHH
T ss_pred             EECCCCCCC----CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCCCCCCCccHHHHHHH
Confidence            999997643    56778899999999999999999999999999988888999999999998887  888999999999


Q ss_pred             HHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCCHH
Q 021960          189 IVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSK  268 (305)
Q Consensus       189 ~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (305)
                      ++.|+++++.|++++||+||+|+||+++|+|.......                 ++..+.   +..  ..+.+++.+|+
T Consensus       151 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-----------------~~~~~~---~~~--~~p~~~~~~~~  208 (239)
T 2ekp_A          151 LLGLTRALAKEWARLGIRVNLLCPGYVETEFTLPLRQN-----------------PELYEP---ITA--RIPMGRWARPE  208 (239)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTC-----------------HHHHHH---HHT--TCTTSSCBCHH
T ss_pred             HHHHHHHHHHHhhhcCcEEEEEEeCCccCchhhccccC-----------------HHHHHH---HHh--cCCCCCCcCHH
Confidence            99999999999999999999999999999985432100                 111111   111  24678889999


Q ss_pred             HHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          269 DIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       269 dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      |+|+.++||++++.+++||+++.+|||++.
T Consensus       209 dvA~~~~~l~s~~~~~~tG~~~~vdgG~~~  238 (239)
T 2ekp_A          209 EIARVAAVLCGDEAEYLTGQAVAVDGGFLA  238 (239)
T ss_dssp             HHHHHHHHHTSGGGTTCCSCEEEESTTTTT
T ss_pred             HHHHHHHHHcCchhcCCCCCEEEECCCccc
Confidence            999999999999889999999999999764

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=100.00  E-value=1.9e-43  Score=307.05  Aligned_cols=241  Identities=32%  Similarity=0.486  Sum_probs=193.1

Q ss_pred             CCCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           25 SHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        25 ~~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      ...++++|++|||||++|||+++|+.|+++|++|++++|+....+.+.+.+. .++.++.+|++|.+++++++++    .
T Consensus         8 ~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~----~   82 (249)
T 3f9i_A            8 HMIDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALK-DNYTIEVCNLANKEECSNLISK----T   82 (249)
T ss_dssp             -CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC-SSEEEEECCTTSHHHHHHHHHT----C
T ss_pred             ccccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhc-cCccEEEcCCCCHHHHHHHHHh----c
Confidence            3457789999999999999999999999999999999998877666655543 4588999999999998887764    3


Q ss_pred             CCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchh
Q 021960          105 GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTA  184 (305)
Q Consensus       105 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~  184 (305)
                      +++|+||||||....    ..+.+.+.++|++.+++|+.+++++++.+++.|.+++.++||++||..+..+.++...|++
T Consensus        83 ~~id~li~~Ag~~~~----~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~  158 (249)
T 3f9i_A           83 SNLDILVCNAGITSD----TLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGNPGQANYCA  158 (249)
T ss_dssp             SCCSEEEECCC-----------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--CCSCSHHHHH
T ss_pred             CCCCEEEECCCCCCC----CccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccCCCCCchhHH
Confidence            789999999998654    4566778899999999999999999999999999888899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCC
Q 021960          185 SKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT  264 (305)
Q Consensus       185 sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (305)
                      +|+++++|+++++.|++++||+|++|+||+++|++.....                   ++..+.+.   .  ..+.+++
T Consensus       159 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-------------------~~~~~~~~---~--~~~~~~~  214 (249)
T 3f9i_A          159 SKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKLN-------------------EKQREAIV---Q--KIPLGTY  214 (249)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC------CC-------------------HHHHHHHH---H--HCTTCSC
T ss_pred             HHHHHHHHHHHHHHHHHHcCcEEEEEecCccccCcccccC-------------------HHHHHHHH---h--cCCCCCC
Confidence            9999999999999999999999999999999999854321                   11111211   1  2567889


Q ss_pred             CCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          265 LRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       265 ~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      .+|+|+|+.++||+++.++++||++|.+|||+.+
T Consensus       215 ~~~~dva~~~~~l~s~~~~~~tG~~~~vdgG~~~  248 (249)
T 3f9i_A          215 GIPEDVAYAVAFLASNNASYITGQTLHVNGGMLM  248 (249)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSSC
T ss_pred             cCHHHHHHHHHHHcCCccCCccCcEEEECCCEee
Confidence            9999999999999999999999999999999864

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=100.00  E-value=4.7e-43  Score=318.58  Aligned_cols=234  Identities=24%  Similarity=0.279  Sum_probs=204.0

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhh-------hHhhhc--CCCCeEEEEecCCCHHHHHHH
Q 021960           26 HRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGS-------VLASTL--APAPVTFVHCDVSLEEDIENL   96 (305)
Q Consensus        26 ~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~-------~~~~~~--~~~~v~~~~~D~~d~~~i~~~   96 (305)
                      ..+++||++|||||++|||+++|+.|+++|++|++++|+....+       ...+.+  .+.++.++.+|++|.++++++
T Consensus        40 ~~~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~  119 (346)
T 3kvo_A           40 TGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAA  119 (346)
T ss_dssp             CSTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHH
T ss_pred             CCCCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHH
Confidence            45788999999999999999999999999999999999866421       111111  355789999999999999999


Q ss_pred             HHHHHHhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccC-
Q 021960           97 INSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMG-  175 (305)
Q Consensus        97 ~~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~-  175 (305)
                      ++++.+.+|+||+||||||....    .++.+.+.++|++++++|+.+++++++.++|.|++++.++||++||..+..+ 
T Consensus       120 ~~~~~~~~g~iDilVnnAG~~~~----~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~~  195 (346)
T 3kvo_A          120 VEKAIKKFGGIDILVNNASAISL----TNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPV  195 (346)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCC----CCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCGG
T ss_pred             HHHHHHHcCCCCEEEECCCCCCC----CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCCC
Confidence            99999999999999999998644    5677889999999999999999999999999999888899999999999887 


Q ss_pred             -CCCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCc-cccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHH
Q 021960          176 -GLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFG-VATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEF  253 (305)
Q Consensus       176 -~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~-v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (305)
                       .++...|+++|+++++|+++++.|++ +||+||+|+||+ ++|++......                            
T Consensus       196 ~~~~~~~Y~aSKaal~~l~~~la~e~~-~gIrvn~v~PG~~i~T~~~~~~~~----------------------------  246 (346)
T 3kvo_A          196 WFKQHCAYTIAKYGMSMYVLGMAEEFK-GEIAVNALWPKTAIHTAAMDMLGG----------------------------  246 (346)
T ss_dssp             GTSSSHHHHHHHHHHHHHHHHHHHHTT-TTCEEEEEECSBCBCCHHHHHHCC----------------------------
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHhc-CCcEEEEEeCCCccccHHHHhhcc----------------------------
Confidence             67889999999999999999999999 899999999995 99987543211                            


Q ss_pred             HhhcCCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          254 VSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       254 ~~~~~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                          ..+.+++.+|+|+|+.++||+++ .+++||+++ +|||+..
T Consensus       247 ----~~~~~r~~~pedvA~~v~~L~s~-~~~itG~~i-vdgg~~~  285 (346)
T 3kvo_A          247 ----PGIESQCRKVDIIADAAYSIFQK-PKSFTGNFV-IDENILK  285 (346)
T ss_dssp             ------CGGGCBCTHHHHHHHHHHHTS-CTTCCSCEE-EHHHHHH
T ss_pred             ----ccccccCCCHHHHHHHHHHHHhc-CCCCCceEE-ECCcEeh
Confidence                12456778999999999999999 899999998 9999654

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=100.00  E-value=1.2e-43  Score=307.59  Aligned_cols=241  Identities=28%  Similarity=0.410  Sum_probs=200.4

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHH-cCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 021960           29 LEGKVAIITGGARGIGEAAVRLFAR-HGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRL  107 (305)
Q Consensus        29 l~~k~vlVtGas~giG~~ia~~l~~-~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~i  107 (305)
                      .++|++|||||++|||+++|+.|++ .|+.|++++|++...        ..++.++.+|++|.++++++++.+.  ++++
T Consensus         2 ~~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~--------~~~~~~~~~Dv~~~~~v~~~~~~~~--~~~i   71 (244)
T 4e4y_A            2 NAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFS--------AENLKFIKADLTKQQDITNVLDIIK--NVSF   71 (244)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCC--------CTTEEEEECCTTCHHHHHHHHHHTT--TCCE
T ss_pred             CCCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEeccccccc--------cccceEEecCcCCHHHHHHHHHHHH--hCCC
Confidence            3678999999999999999999999 788999998875421        2347889999999999999996553  6789


Q ss_pred             cEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhHH
Q 021960          108 DILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKH  187 (305)
Q Consensus       108 d~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKa  187 (305)
                      |+||||||....    .++.+.+.++|++.+++|+.+++++++.++|.|.++  ++||++||..+..+.++...|++||+
T Consensus        72 d~lv~nAg~~~~----~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~--g~iv~~sS~~~~~~~~~~~~Y~asKa  145 (244)
T 4e4y_A           72 DGIFLNAGILIK----GSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVG--ASIVFNGSDQCFIAKPNSFAYTLSKG  145 (244)
T ss_dssp             EEEEECCCCCCC----BCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEE--EEEEEECCGGGTCCCTTBHHHHHHHH
T ss_pred             CEEEECCccCCC----CCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccC--cEEEEECCHHHccCCCCCchhHHHHH
Confidence            999999998654    567889999999999999999999999999988554  89999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCCH
Q 021960          188 AIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRS  267 (305)
Q Consensus       188 a~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (305)
                      ++++|+++++.|++++||+||+|+||+++|+|.......        ..........+..+..   ..  ..+.+++.+|
T Consensus       146 a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~--------~~~~~~~~~~~~~~~~---~~--~~p~~r~~~p  212 (244)
T 4e4y_A          146 AIAQMTKSLALDLAKYQIRVNTVCPGTVDTDLYRNLIQK--------YANNVGISFDEAQKQE---EK--EFPLNRIAQP  212 (244)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEESCBCCHHHHHHHHH--------HHHHHTCCHHHHHHHH---HT--TSTTSSCBCH
T ss_pred             HHHHHHHHHHHHHHHcCeEEEEEecCccCchhhHHHHHh--------hhhhcCCCHHHHHHHH---hh--cCCCCCCcCH
Confidence            999999999999999999999999999999986544221        0000011111111111   11  3677899999


Q ss_pred             HHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          268 KDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       268 ~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      +|+|+.++||+++.++++||++|.+|||++.
T Consensus       213 ~dvA~~v~~l~s~~~~~itG~~i~vdGG~~~  243 (244)
T 4e4y_A          213 QEIAELVIFLLSDKSKFMTGGLIPIDGGYTA  243 (244)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHHHHHhcCccccccCCeEeECCCccC
Confidence            9999999999999999999999999999875

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=100.00  E-value=9.9e-43  Score=307.99  Aligned_cols=245  Identities=30%  Similarity=0.457  Sum_probs=206.8

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCC
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGR  106 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~  106 (305)
                      .++++|++|||||++|||+++|+.|+++|++|++++|+....+.+.+.+ +.++.++.+|++|.++++++++++ +.+++
T Consensus        26 ~~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~-~~~~~  103 (281)
T 3ppi_A           26 KQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADEL-GNRAEFVSTNVTSEDSVLAAIEAA-NQLGR  103 (281)
T ss_dssp             GGGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-CTTEEEEECCTTCHHHHHHHHHHH-TTSSE
T ss_pred             hccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh-CCceEEEEcCCCCHHHHHHHHHHH-HHhCC
Confidence            4678999999999999999999999999999999999987776666555 456999999999999999999999 78889


Q ss_pred             ccEEEEcCCCCCCCCC--CCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHc------CCCCEEEEecccccccCCCC
Q 021960          107 LDILYNNAGVLGNQRK--HKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMIN------RGGGCIISTASVAGVMGGLG  178 (305)
Q Consensus       107 id~li~nag~~~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~------~~~~~iv~isS~~~~~~~~~  178 (305)
                      +|++|||++.......  .....+.+.++|++.+++|+.+++++++.+++.|.+      ++.++||++||..+..+.++
T Consensus       104 id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  183 (281)
T 3ppi_A          104 LRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQIG  183 (281)
T ss_dssp             EEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTSCCTT
T ss_pred             CCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccCCCCC
Confidence            9999999443322110  011146789999999999999999999999999976      56789999999999999999


Q ss_pred             CccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcC
Q 021960          179 PHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLG  258 (305)
Q Consensus       179 ~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (305)
                      ...|+++|+|+++|+++++.|++++||+|++|+||+++|+|.....                   ++....   +..  .
T Consensus       184 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~-------------------~~~~~~---~~~--~  239 (281)
T 3ppi_A          184 QTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMESVG-------------------EEALAK---FAA--N  239 (281)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTTC-------------------HHHHHH---HHH--T
T ss_pred             CcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhccc-------------------HHHHHH---HHh--c
Confidence            9999999999999999999999999999999999999999865421                   111111   122  2


Q ss_pred             CCC-CCCCCHHHHHHHHHHhccCCCCceeccEEEecCCcccc
Q 021960          259 NLK-GTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTS  299 (305)
Q Consensus       259 ~~~-~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~  299 (305)
                      .+. +++.+|+|+|+.++||+++  .++||++|.+|||+.+.
T Consensus       240 ~~~~~~~~~pedvA~~v~~l~s~--~~~tG~~i~vdGG~~~~  279 (281)
T 3ppi_A          240 IPFPKRLGTPDEFADAAAFLLTN--GYINGEVMRLDGAQRFT  279 (281)
T ss_dssp             CCSSSSCBCHHHHHHHHHHHHHC--SSCCSCEEEESTTCCCC
T ss_pred             CCCCCCCCCHHHHHHHHHHHHcC--CCcCCcEEEECCCcccC
Confidence            344 7889999999999999986  58999999999998765

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=8.8e-43  Score=307.79  Aligned_cols=253  Identities=32%  Similarity=0.402  Sum_probs=200.5

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc-----CCCCeEEEEecCCCHHHHHHHHHHHHH
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL-----APAPVTFVHCDVSLEEDIENLINSTVS  102 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~-----~~~~v~~~~~D~~d~~~i~~~~~~~~~  102 (305)
                      ++++|++|||||++|||+++++.|+++|++|++++|+....+...+.+     .+.++.++.+|++|.++++++++++.+
T Consensus         3 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   82 (278)
T 1spx_A            3 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG   82 (278)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHH
Confidence            468999999999999999999999999999999999876655444333     234688999999999999999999999


Q ss_pred             hcCCccEEEEcCCCCCCCCCCCcccCC----CHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEeccccc-ccCCC
Q 021960          103 RYGRLDILYNNAGVLGNQRKHKSIIDF----DADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAG-VMGGL  177 (305)
Q Consensus       103 ~~g~id~li~nag~~~~~~~~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~-~~~~~  177 (305)
                      .+|++|+||||||....    .++.+.    +.++|++.+++|+.+++++++.++|.|.+++ ++||++||..+ ..+.+
T Consensus        83 ~~g~id~lv~~Ag~~~~----~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~~  157 (278)
T 1spx_A           83 KFGKLDILVNNAGAAIP----DSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLHATP  157 (278)
T ss_dssp             HHSCCCEEEECCC-----------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSSCCT
T ss_pred             HcCCCCEEEECCCCCCC----cccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEecccccccCCC
Confidence            99999999999997643    455566    8999999999999999999999999997765 99999999998 88888


Q ss_pred             CCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhc
Q 021960          178 GPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGL  257 (305)
Q Consensus       178 ~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (305)
                      +...|+++|++++.++++++.|++++||+||+|+||+++|++........  . .          .....+....+..  
T Consensus       158 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~--~-~----------~~~~~~~~~~~~~--  222 (278)
T 1spx_A          158 DFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPE--E-T----------SKKFYSTMATMKE--  222 (278)
T ss_dssp             TSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC---------------------------HHHHHHHHH--
T ss_pred             CccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCc--h-h----------hhhhhHHHHHHHh--
Confidence            99999999999999999999999999999999999999999854321100  0 0          0000000111111  


Q ss_pred             CCCCCCCCCHHHHHHHHHHhccCCCCc-eeccEEEecCCccccc
Q 021960          258 GNLKGTTLRSKDIAEAALYLASDESRY-VSGHNLVVDGGVTTSR  300 (305)
Q Consensus       258 ~~~~~~~~~~~dva~~v~~l~s~~~~~-~tG~~i~idgG~~~~~  300 (305)
                      ..|.+++.+|+|+|+.++||+++..++ +||++|.+|||..++-
T Consensus       223 ~~p~~~~~~~~dvA~~v~~l~s~~~~~~~tG~~~~vdgG~~~~~  266 (278)
T 1spx_A          223 CVPAGVMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGSSLIM  266 (278)
T ss_dssp             HCTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGC-
T ss_pred             cCCCcCCCCHHHHHHHHHHHcCccccCcccCcEEEECCCccccc
Confidence            146678899999999999999987777 9999999999986543

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=100.00  E-value=9.8e-43  Score=306.68  Aligned_cols=241  Identities=30%  Similarity=0.453  Sum_probs=198.3

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEE-ecCcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhcCC
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIA-DVEDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRYGR  106 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~-~r~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~  106 (305)
                      ++|++|||||++|||+++|++|+++|++|+++ .|+....+.+.+.+  .+.++.++.+|++|.++++++++++.+.+++
T Consensus        25 ~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~  104 (272)
T 4e3z_A           25 DTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFGR  104 (272)
T ss_dssp             CSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            57999999999999999999999999999887 56655444443332  3457899999999999999999999999999


Q ss_pred             ccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC---CCCEEEEecccccccCCC-CCccc
Q 021960          107 LDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINR---GGGCIISTASVAGVMGGL-GPHAY  182 (305)
Q Consensus       107 id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~---~~~~iv~isS~~~~~~~~-~~~~Y  182 (305)
                      +|+||||||.....   .++.+.+.++|++.+++|+.+++++++.+++.|.+.   +.++||++||.++..+.+ ....|
T Consensus       105 id~li~nAg~~~~~---~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y  181 (272)
T 4e3z_A          105 LDGLVNNAGIVDYP---QRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSATQYVDY  181 (272)
T ss_dssp             CCEEEECCCCCCCC---CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCTTTCHHH
T ss_pred             CCEEEECCCCCCCC---CChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCCCCCcchh
Confidence            99999999986432   567788999999999999999999999999999763   468999999999988776 67789


Q ss_pred             hhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCC
Q 021960          183 TASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKG  262 (305)
Q Consensus       183 ~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (305)
                      +++|+++++|+++++.|++++||+|++|+||+++|++.......                  +..+.   ...  ..+.+
T Consensus       182 ~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~------------------~~~~~---~~~--~~~~~  238 (272)
T 4e3z_A          182 AASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASGGLP------------------DRARE---MAP--SVPMQ  238 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-----------------------------------------CCTTS
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCcccccCCh------------------HHHHH---Hhh--cCCcC
Confidence            99999999999999999999999999999999999985431110                  00011   111  35678


Q ss_pred             CCCCHHHHHHHHHHhccCCCCceeccEEEecCCc
Q 021960          263 TTLRSKDIAEAALYLASDESRYVSGHNLVVDGGV  296 (305)
Q Consensus       263 ~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~  296 (305)
                      ++.+|+|+|+.++||+++..+++||++|.+|||.
T Consensus       239 ~~~~~edvA~~i~~l~s~~~~~~tG~~i~vdgG~  272 (272)
T 4e3z_A          239 RAGMPEEVADAILYLLSPSASYVTGSILNVSGGR  272 (272)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             CCcCHHHHHHHHHHHhCCccccccCCEEeecCCC
Confidence            8889999999999999999999999999999995

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=100.00  E-value=9.5e-43  Score=306.87  Aligned_cols=243  Identities=26%  Similarity=0.320  Sum_probs=191.0

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcC
Q 021960           26 HRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYG  105 (305)
Q Consensus        26 ~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g  105 (305)
                      ...+++|++|||||++|||+++|+.|+++|++|++++|+....+...+.+. .++.++.+|++|.++++++++++.+.+|
T Consensus        23 m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  101 (272)
T 4dyv_A           23 MSKTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIG-DDALCVPTDVTDPDSVRALFTATVEKFG  101 (272)
T ss_dssp             -----CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHT-SCCEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             hcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhC-CCeEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            346789999999999999999999999999999999998877666655553 5688999999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC--CCEEEEecccccccCCCCCccch
Q 021960          106 RLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRG--GGCIISTASVAGVMGGLGPHAYT  183 (305)
Q Consensus       106 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~~~iv~isS~~~~~~~~~~~~Y~  183 (305)
                      ++|+||||||.....   .++.+.+.++|++.+++|+.+++++++.++|.|.+++  .|+||++||..+..+.++...|+
T Consensus       102 ~iD~lVnnAg~~~~~---~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~  178 (272)
T 4dyv_A          102 RVDVLFNNAGTGAPA---IPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPRPYSAPYT  178 (272)
T ss_dssp             CCCEEEECCCCCCCS---SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSCCTTCHHHH
T ss_pred             CCCEEEECCCCCCCC---CChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCCCCCchHHH
Confidence            999999999986432   5678899999999999999999999999999998776  68999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCC
Q 021960          184 ASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGT  263 (305)
Q Consensus       184 ~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (305)
                      ++|+++++|+++++.|++++||+||+|+||+++|+|........              +      ...     ...+.++
T Consensus       179 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~--------------~------~~~-----~~~~~~~  233 (272)
T 4dyv_A          179 ATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQKMKAGV--------------P------QAD-----LSIKVEP  233 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC-----------------------------------------------
T ss_pred             HHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhhhhcccc--------------h------hhh-----hcccccC
Confidence            99999999999999999999999999999999999865432110              0      000     0134567


Q ss_pred             CCCHHHHHHHHHHhccCCCCceeccEEEecCCcc
Q 021960          264 TLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT  297 (305)
Q Consensus       264 ~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~  297 (305)
                      +++|+|+|+.++||++.......+++.....+..
T Consensus       234 ~~~pedvA~~v~fL~s~~~~~~~~~i~i~~~~~~  267 (272)
T 4dyv_A          234 VMDVAHVASAVVYMASLPLDANVQFMTIMATKMP  267 (272)
T ss_dssp             --CHHHHHHHHHHHHHSCTTSCCCEEEEEEC---
T ss_pred             CCCHHHHHHHHHHHhCCCCcCccceEEEeccCcc
Confidence            8899999999999999776655555554444443

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=100.00  E-value=4.6e-42  Score=300.16  Aligned_cols=250  Identities=30%  Similarity=0.430  Sum_probs=211.5

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEec-CcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHh
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADV-EDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSR  103 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r-~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~  103 (305)
                      .++++|++|||||+||||++++++|+++|++|++++| +....+.+.+.+  .+.++.++.+|++|.++++++++++.+.
T Consensus         3 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   82 (261)
T 1gee_A            3 KDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKE   82 (261)
T ss_dssp             GGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999 554443333322  2456889999999999999999999999


Q ss_pred             cCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-CCEEEEecccccccCCCCCccc
Q 021960          104 YGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRG-GGCIISTASVAGVMGGLGPHAY  182 (305)
Q Consensus       104 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y  182 (305)
                      ++++|+||||||....    .++.+.+.++|++.+++|+.+++++++.+++.|.+++ .++||++||..+..+.++...|
T Consensus        83 ~g~id~li~~Ag~~~~----~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y  158 (261)
T 1gee_A           83 FGKLDVMINNAGLENP----VSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHY  158 (261)
T ss_dssp             HSCCCEEEECCCCCCC----CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHH
T ss_pred             cCCCCEEEECCCCCCC----CCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCCCCCccHH
Confidence            9999999999997643    4567789999999999999999999999999998876 7899999999999998999999


Q ss_pred             hhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCC
Q 021960          183 TASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKG  262 (305)
Q Consensus       183 ~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (305)
                      +++|++++.+++.++.|++++||++++|+||+++|++.......                 .+....   +..  ..+.+
T Consensus       159 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-----------------~~~~~~---~~~--~~~~~  216 (261)
T 1gee_A          159 AASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFAD-----------------PEQRAD---VES--MIPMG  216 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHS-----------------HHHHHH---HHT--TCTTS
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhhcccC-----------------hhHHHH---HHh--cCCCC
Confidence            99999999999999999999999999999999999986432111                 111111   111  24567


Q ss_pred             CCCCHHHHHHHHHHhccCCCCceeccEEEecCCccccccc
Q 021960          263 TTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTSRNC  302 (305)
Q Consensus       263 ~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~~~~  302 (305)
                      ++.+|+|+|+.++||+++...+++|++|.+|||+++..++
T Consensus       217 ~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~~  256 (261)
T 1gee_A          217 YIGEPEEIAAVAAWLASSEASYVTGITLFADGGMTLYPSF  256 (261)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCGGG
T ss_pred             CCcCHHHHHHHHHHHhCccccCCCCcEEEEcCCcccCCCC
Confidence            8899999999999999988889999999999998775443

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=100.00  E-value=8.2e-43  Score=305.42  Aligned_cols=247  Identities=21%  Similarity=0.264  Sum_probs=204.8

Q ss_pred             CCCCCCEEEEecCC--CchHHHHHHHHHHcCCeEEEEecCcchh---hhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHH
Q 021960           27 RRLEGKVAIITGGA--RGIGEAAVRLFARHGAKVVIADVEDTLG---SVLASTLAPAPVTFVHCDVSLEEDIENLINSTV  101 (305)
Q Consensus        27 ~~l~~k~vlVtGas--~giG~~ia~~l~~~g~~vv~~~r~~~~~---~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~  101 (305)
                      .++++|++|||||+  +|||+++++.|+++|++|++++|+....   +.+.+.. + .+.++.+|++|.++++++++++.
T Consensus         4 ~~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~-~-~~~~~~~D~~~~~~v~~~~~~~~   81 (261)
T 2wyu_A            4 VDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEAL-G-GALLFRADVTQDEELDALFAGVK   81 (261)
T ss_dssp             ECCTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHHHT-T-CCEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc-C-CcEEEECCCCCHHHHHHHHHHHH
Confidence            35789999999999  9999999999999999999999986421   2222211 2 37889999999999999999999


Q ss_pred             HhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCcc
Q 021960          102 SRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHA  181 (305)
Q Consensus       102 ~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~  181 (305)
                      +.++++|+||||||.........++.+.+.++|++.+++|+.+++++++.+++.|.+  .++||++||..+..+.++...
T Consensus        82 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~  159 (261)
T 2wyu_A           82 EAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE--GGGIVTLTYYASEKVVPKYNV  159 (261)
T ss_dssp             HHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE--EEEEEEEECGGGTSBCTTCHH
T ss_pred             HHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhcc--CCEEEEEecccccCCCCCchH
Confidence            999999999999997532000135677899999999999999999999999998853  489999999999999889999


Q ss_pred             chhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCC
Q 021960          182 YTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLK  261 (305)
Q Consensus       182 Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (305)
                      |+++|+++++|+++++.|++++||+||+|+||+++|++..... .                .++..+.+   ..  ..|.
T Consensus       160 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-~----------------~~~~~~~~---~~--~~p~  217 (261)
T 2wyu_A          160 MAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIP-G----------------FTKMYDRV---AQ--TAPL  217 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGCT-T----------------HHHHHHHH---HH--HSTT
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhcc-c----------------cHHHHHHH---Hh--cCCC
Confidence            9999999999999999999999999999999999999853210 0                01111111   11  2467


Q ss_pred             CCCCCHHHHHHHHHHhccCCCCceeccEEEecCCcccc
Q 021960          262 GTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTS  299 (305)
Q Consensus       262 ~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~  299 (305)
                      +++.+|+|+|+.++||+++.++++||++|.+|||++..
T Consensus       218 ~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~~~  255 (261)
T 2wyu_A          218 RRNITQEEVGNLGLFLLSPLASGITGEVVYVDAGYHIM  255 (261)
T ss_dssp             SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGB
T ss_pred             CCCCCHHHHHHHHHHHcChhhcCCCCCEEEECCCcccc
Confidence            88999999999999999998899999999999998764

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=100.00  E-value=3.5e-42  Score=305.22  Aligned_cols=249  Identities=25%  Similarity=0.306  Sum_probs=204.6

Q ss_pred             CCCCCEEEEecCC--CchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcC-CCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           28 RLEGKVAIITGGA--RGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLA-PAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        28 ~l~~k~vlVtGas--~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~-~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      .+++|++|||||+  +|||+++++.|+++|++|++++|+....+...+... ...+.++.+|++|.++++++++++.+.+
T Consensus        18 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   97 (285)
T 2p91_A           18 LLEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENW   97 (285)
T ss_dssp             TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             ccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            4789999999999  999999999999999999999998642112211110 1236789999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchh
Q 021960          105 GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTA  184 (305)
Q Consensus       105 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~  184 (305)
                      +++|+||||||.........++.+.+.++|++.+++|+.+++++++.+++.|.++ .++||++||..+..+.++...|++
T Consensus        98 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~  176 (285)
T 2p91_A           98 GSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGR-NGAIVTLSYYGAEKVVPHYNVMGI  176 (285)
T ss_dssp             SCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTS-CCEEEEEECGGGTSBCTTTTHHHH
T ss_pred             CCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCEEEEEccchhccCCCCccHHHH
Confidence            9999999999975321001456678999999999999999999999999998654 589999999999999889999999


Q ss_pred             hHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCC
Q 021960          185 SKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT  264 (305)
Q Consensus       185 sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (305)
                      +|+++++|+++++.|++++||+||+|+||+++|++......                 ..+..+.+   ..  ..+.+++
T Consensus       177 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~-----------------~~~~~~~~---~~--~~p~~~~  234 (285)
T 2p91_A          177 AKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSITG-----------------FHLLMEHT---TK--VNPFGKP  234 (285)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--CTT-----------------HHHHHHHH---HH--HSTTSSC
T ss_pred             HHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhcccc-----------------hHHHHHHH---Hh--cCCCCCC
Confidence            99999999999999999999999999999999998432100                 01111111   11  2466788


Q ss_pred             CCHHHHHHHHHHhccCCCCceeccEEEecCCcccc
Q 021960          265 LRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTS  299 (305)
Q Consensus       265 ~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~  299 (305)
                      .+|+|+|+.++||+++.++++||++|.+|||++..
T Consensus       235 ~~~~dva~~~~~l~s~~~~~~tG~~~~vdgg~~~~  269 (285)
T 2p91_A          235 ITIEDVGDTAVFLCSDWARAITGEVVHVDNGYHIM  269 (285)
T ss_dssp             CCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGGB
T ss_pred             cCHHHHHHHHHHHcCCcccCCCCCEEEECCCcccc
Confidence            99999999999999998899999999999998764

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=100.00  E-value=2.2e-42  Score=304.93  Aligned_cols=245  Identities=21%  Similarity=0.238  Sum_probs=204.6

Q ss_pred             CCCCCEEEEecCC--CchHHHHHHHHHHcCCeEEEEecCcch---hhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHH
Q 021960           28 RLEGKVAIITGGA--RGIGEAAVRLFARHGAKVVIADVEDTL---GSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVS  102 (305)
Q Consensus        28 ~l~~k~vlVtGas--~giG~~ia~~l~~~g~~vv~~~r~~~~---~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~  102 (305)
                      ++++|++|||||+  +|||+++++.|+++|++|++++|+...   .+.+.+.. + ++.++.+|++|.++++++++++.+
T Consensus         3 ~l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~-~-~~~~~~~D~~~~~~v~~~~~~~~~   80 (275)
T 2pd4_A            3 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQEL-N-SPYVYELDVSKEEHFKSLYNSVKK   80 (275)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHT-T-CCCEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-C-CcEEEEcCCCCHHHHHHHHHHHHH
Confidence            4689999999999  999999999999999999999998752   22222222 2 378899999999999999999999


Q ss_pred             hcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccc
Q 021960          103 RYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAY  182 (305)
Q Consensus       103 ~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y  182 (305)
                      .++++|+||||||.........++.+.+.++|++.+++|+.+++++++.++|.|.+  +++||++||..+..+.++...|
T Consensus        81 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y  158 (275)
T 2pd4_A           81 DLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNN--GASVLTLSYLGSTKYMAHYNVM  158 (275)
T ss_dssp             HTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEECGGGTSBCTTCHHH
T ss_pred             HcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc--CCEEEEEecchhcCCCCCchhh
Confidence            99999999999997642100145678899999999999999999999999998854  4899999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCC
Q 021960          183 TASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKG  262 (305)
Q Consensus       183 ~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (305)
                      +++|+++++|+++++.|++++||+||+|+||+++|+|......                 .++..+.+   ..  ..+.+
T Consensus       159 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~-----------------~~~~~~~~---~~--~~p~~  216 (275)
T 2pd4_A          159 GLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIAD-----------------FRMILKWN---EI--NAPLR  216 (275)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTT-----------------HHHHHHHH---HH--HSTTS
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhccc-----------------cHHHHHHH---Hh--cCCcC
Confidence            9999999999999999999999999999999999998543210                 01111111   11  24667


Q ss_pred             CCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          263 TTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       263 ~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      ++.+|+|+|+.++||+++...++||++|.+|||+..
T Consensus       217 ~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdgg~~~  252 (275)
T 2pd4_A          217 KNVSLEEVGNAGMYLLSSLSSGVSGEVHFVDAGYHV  252 (275)
T ss_dssp             SCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CCCCHHHHHHHHHHHhCccccCCCCCEEEECCCccc
Confidence            889999999999999999889999999999999865

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=100.00  E-value=1.7e-42  Score=303.95  Aligned_cols=248  Identities=18%  Similarity=0.231  Sum_probs=203.3

Q ss_pred             CCCCCEEEEecCC--CchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc-CCCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           28 RLEGKVAIITGGA--RGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL-APAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        28 ~l~~k~vlVtGas--~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~-~~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      .+++|++|||||+  +|||+++++.|+++|++|++++|+....+...+.. ......++.+|++|.++++++++++.+.+
T Consensus         6 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   85 (265)
T 1qsg_A            6 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVW   85 (265)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTC
T ss_pred             ccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHc
Confidence            4789999999999  99999999999999999999999862212221111 01124788999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCCcccC-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccch
Q 021960          105 GRLDILYNNAGVLGNQRKHKSIID-FDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYT  183 (305)
Q Consensus       105 g~id~li~nag~~~~~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~  183 (305)
                      +++|+||||||.........++.+ .+.++|++.+++|+.+++++++.+++.|.+  .++||++||..+..+.++...|+
T Consensus        86 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~  163 (265)
T 1qsg_A           86 PKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP--GSALLTLSYLGAERAIPNYNVMG  163 (265)
T ss_dssp             SSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEECGGGTSBCTTTTHHH
T ss_pred             CCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc--CCEEEEEcchhhccCCCCchHHH
Confidence            999999999997542100135666 899999999999999999999999998854  48999999999999988999999


Q ss_pred             hhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCC
Q 021960          184 ASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGT  263 (305)
Q Consensus       184 ~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (305)
                      ++|+++++|+++++.|++++||+||+|+||+++|++......                 .++..+.+   ..  ..+.++
T Consensus       164 ~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~-----------------~~~~~~~~---~~--~~p~~~  221 (265)
T 1qsg_A          164 LAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKD-----------------FRKMLAHC---EA--VTPIRR  221 (265)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTT-----------------HHHHHHHH---HH--HSTTSS
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhcccc-----------------cHHHHHHH---Hh--cCCCCC
Confidence            999999999999999999999999999999999998532100                 01111111   11  246678


Q ss_pred             CCCHHHHHHHHHHhccCCCCceeccEEEecCCcccc
Q 021960          264 TLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTS  299 (305)
Q Consensus       264 ~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~  299 (305)
                      +.+|+|+|+.++||+++..+++||++|.+|||++..
T Consensus       222 ~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~~~  257 (265)
T 1qsg_A          222 TVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGFSIA  257 (265)
T ss_dssp             CCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGGB
T ss_pred             CCCHHHHHHHHHHHhCchhcCccCCEEEECCCcCCC
Confidence            899999999999999998899999999999998764

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=100.00  E-value=1e-41  Score=296.75  Aligned_cols=244  Identities=33%  Similarity=0.453  Sum_probs=208.5

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCe-EEEEecCCCHHHHHHHHHHHHHhcC
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPV-TFVHCDVSLEEDIENLINSTVSRYG  105 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v-~~~~~D~~d~~~i~~~~~~~~~~~g  105 (305)
                      +++++|++|||||+||||+++++.|+++|++|++++|+....+...+.+ +.++ .++.+|++|.++++++++++.+ ++
T Consensus         7 ~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~   84 (254)
T 2wsb_A            7 FRLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQEL-GAAVAARIVADVTDAEAMTAAAAEAEA-VA   84 (254)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-GGGEEEEEECCTTCHHHHHHHHHHHHH-HS
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-cccceeEEEEecCCHHHHHHHHHHHHh-hC
Confidence            4678999999999999999999999999999999999876655444443 2346 8899999999999999999988 88


Q ss_pred             CccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCC--ccch
Q 021960          106 RLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGP--HAYT  183 (305)
Q Consensus       106 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~--~~Y~  183 (305)
                      ++|+||||||....    .++.+.+.+++++.+++|+.+++++++.+++.|.+++.++||++||..+..+.+..  ..|+
T Consensus        85 ~id~li~~Ag~~~~----~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~Y~  160 (254)
T 2wsb_A           85 PVSILVNSAGIARL----HDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVNRPQFASSYM  160 (254)
T ss_dssp             CCCEEEECCCCCCC----BCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSSCBHHHH
T ss_pred             CCcEEEECCccCCC----CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccCCCCCcchHHH
Confidence            99999999997643    45677899999999999999999999999999988888999999999998887777  8999


Q ss_pred             hhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCC
Q 021960          184 ASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGT  263 (305)
Q Consensus       184 ~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (305)
                      ++|++++.++++++.|++++||++++|+||+++|++.......                 ++..+.   +..  ..+.++
T Consensus       161 ~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~-----------------~~~~~~---~~~--~~~~~~  218 (254)
T 2wsb_A          161 ASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMRER-----------------PELFET---WLD--MTPMGR  218 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHHTC-----------------HHHHHH---HHH--TSTTSS
T ss_pred             HHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhccccC-----------------hHHHHH---HHh--cCCCCC
Confidence            9999999999999999999999999999999999985432110                 111111   111  245678


Q ss_pred             CCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          264 TLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       264 ~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      +.+|+|+|+.++||+++..++++|+++.+|||++.
T Consensus       219 ~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~~~  253 (254)
T 2wsb_A          219 CGEPSEIAAAALFLASPAASYVTGAILAVDGGYTV  253 (254)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CCCHHHHHHHHHHHhCcccccccCCEEEECCCEec
Confidence            89999999999999999888999999999999764

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=100.00  E-value=1.8e-42  Score=298.71  Aligned_cols=228  Identities=20%  Similarity=0.220  Sum_probs=191.4

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 021960           29 LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLD  108 (305)
Q Consensus        29 l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id  108 (305)
                      |++|++|||||++|||+++++.|+++|++|++++|+....+...+.+. .++.++.+|++|.++++++++++.+.++++|
T Consensus         1 Ms~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   79 (235)
T 3l6e_A            1 MSLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLG-NAVIGIVADLAHHEDVDVAFAAAVEWGGLPE   79 (235)
T ss_dssp             --CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG-GGEEEEECCTTSHHHHHHHHHHHHHHHCSCS
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc-CCceEEECCCCCHHHHHHHHHHHHHhcCCCc
Confidence            457999999999999999999999999999999999877666655553 3589999999999999999999999999999


Q ss_pred             EEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhHHH
Q 021960          109 ILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHA  188 (305)
Q Consensus       109 ~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKaa  188 (305)
                      +||||||....    .++.+.+.++|++.+++|+.+++++++.++|.|.+++ ++||++||..+..+.++...|++||++
T Consensus        80 ~lvnnAg~~~~----~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~iv~isS~~~~~~~~~~~~Y~asKaa  154 (235)
T 3l6e_A           80 LVLHCAGTGEF----GPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERG-GVLANVLSSAAQVGKANESLYCASKWG  154 (235)
T ss_dssp             EEEEECCCC----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-EEEEEECCEECCSSCSSHHHHHHHHHH
T ss_pred             EEEECCCCCCC----CChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEEeCHHhcCCCCCCcHHHHHHHH
Confidence            99999998543    5677889999999999999999999999999997765 599999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCCHH
Q 021960          189 IVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSK  268 (305)
Q Consensus       189 ~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (305)
                      +++|+++++.|++++||+||+|+||+++|+|......                                 .+.+++++||
T Consensus       155 ~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~---------------------------------~~~~~~~~pe  201 (235)
T 3l6e_A          155 MRGFLESLRAELKDSPLRLVNLYPSGIRSEFWDNTDH---------------------------------VDPSGFMTPE  201 (235)
T ss_dssp             HHHHHHHHHHHTTTSSEEEEEEEEEEECCCC--------------------------------------------CBCHH
T ss_pred             HHHHHHHHHHHhhccCCEEEEEeCCCccCcchhccCC---------------------------------CCCcCCCCHH
Confidence            9999999999999999999999999999998532200                                 1224678999


Q ss_pred             HHHHHHHHhcc-CCCCceeccEEEecCC
Q 021960          269 DIAEAALYLAS-DESRYVSGHNLVVDGG  295 (305)
Q Consensus       269 dva~~v~~l~s-~~~~~~tG~~i~idgG  295 (305)
                      |+|+.++|+++ +...+++|-.+.-...
T Consensus       202 dvA~~v~~l~~~~~~~~i~~i~~~~~~~  229 (235)
T 3l6e_A          202 DAAAYMLDALEARSSCHVTDLFIGRNEG  229 (235)
T ss_dssp             HHHHHHHHHTCCCSSEEEEEEEEEECCC
T ss_pred             HHHHHHHHHHhCCCCcceeeEEEecCCC
Confidence            99999999998 5677888866654443

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=100.00  E-value=1.3e-41  Score=295.37  Aligned_cols=245  Identities=32%  Similarity=0.466  Sum_probs=208.1

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc---CCCCeEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 021960           31 GKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL---APAPVTFVHCDVSLEEDIENLINSTVSRYGRL  107 (305)
Q Consensus        31 ~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~---~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~i  107 (305)
                      +|++|||||+||||++++++|+++|++|++++|+....+...+.+   .+.++.++.+|++|.++++++++++.+.++++
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAI   81 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            689999999999999999999999999999999876655444333   13468999999999999999999999999999


Q ss_pred             cEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhHH
Q 021960          108 DILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKH  187 (305)
Q Consensus       108 d~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKa  187 (305)
                      |+||||||..... ....+.+.+.+++++.+++|+.+++++++.+++.|.+++.++||++||..+..+.++...|+++|+
T Consensus        82 d~li~~Ag~~~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  160 (250)
T 2cfc_A           82 DVLVNNAGITGNS-EAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTSKG  160 (250)
T ss_dssp             CEEEECCCCCCCT-TCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             CEEEECCCCCCCC-CcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCCchhHHHHHH
Confidence            9999999976431 112267789999999999999999999999999998888899999999999999899999999999


Q ss_pred             HHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCCH
Q 021960          188 AIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRS  267 (305)
Q Consensus       188 a~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (305)
                      +++.++++++.|++++||++++|+||+++|++.......                 ....+.   +..  ..+.+++.+|
T Consensus       161 a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-----------------~~~~~~---~~~--~~~~~~~~~~  218 (250)
T 2cfc_A          161 AVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLDQ-----------------PELRDQ---VLA--RIPQKEIGTA  218 (250)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHHHTS-----------------HHHHHH---HHT--TCTTCSCBCH
T ss_pred             HHHHHHHHHHHHhcccCeEEEEEEeCcCccCccccccCC-----------------HHHHHH---HHh--cCCCCCCcCH
Confidence            999999999999999999999999999999985431110                 111111   111  2466788999


Q ss_pred             HHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          268 KDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       268 ~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      +|+|+.++||+++..++++|++|.+|||++.
T Consensus       219 ~dva~~~~~l~~~~~~~~~G~~~~v~gG~~~  249 (250)
T 2cfc_A          219 AQVADAVMFLAGEDATYVNGAALVMDGAYTA  249 (250)
T ss_dssp             HHHHHHHHHHHSTTCTTCCSCEEEESTTGGG
T ss_pred             HHHHHHHHHHcCchhhcccCCEEEECCceec
Confidence            9999999999999989999999999999864

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=100.00  E-value=1.6e-41  Score=294.86  Aligned_cols=235  Identities=28%  Similarity=0.390  Sum_probs=199.8

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhcC
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRYG  105 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g  105 (305)
                      ++++|++|||||++|||+++++.|+++|++|++++|+....+.+.+.+  .+.++.++.+|++|.++++++++++.+.++
T Consensus         4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g   83 (247)
T 2jah_A            4 ALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALG   83 (247)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            578999999999999999999999999999999999876655444333  245689999999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhh
Q 021960          106 RLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTAS  185 (305)
Q Consensus       106 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  185 (305)
                      ++|+||||||....    .++.+.+.++|++.+++|+.+++++++.++|.|.+++ |+||++||..+..+.++...|+++
T Consensus        84 ~id~lv~nAg~~~~----~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~as  158 (247)
T 2jah_A           84 GLDILVNNAGIMLL----GPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAGRVNVRNAAVYQAT  158 (247)
T ss_dssp             CCSEEEECCCCCCC----CCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTCCCTTCHHHHHH
T ss_pred             CCCEEEECCCCCCC----CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEEEEccHHhcCCCCCCcHHHHH
Confidence            99999999997643    5677889999999999999999999999999998777 999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCC-
Q 021960          186 KHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT-  264 (305)
Q Consensus       186 Kaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  264 (305)
                      |+++++|+++++.|++++||+||+|+||+++|+|..... .                 +...+.+..      .+ +++ 
T Consensus       159 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~-~-----------------~~~~~~~~~------~~-~~~~  213 (247)
T 2jah_A          159 KFGVNAFSETLRQEVTERGVRVVVIEPGTTDTELRGHIT-H-----------------TATKEMYEQ------RI-SQIR  213 (247)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCC-C-----------------HHHHHHHHH------HT-TTSC
T ss_pred             HHHHHHHHHHHHHHhcccCcEEEEEECCCCCCcchhccc-c-----------------hhhHHHHHh------cc-cccC
Confidence            999999999999999999999999999999999854310 0                 110011111      12 344 


Q ss_pred             -CCHHHHHHHHHHhccCCCCceeccEEEec
Q 021960          265 -LRSKDIAEAALYLASDESRYVSGHNLVVD  293 (305)
Q Consensus       265 -~~~~dva~~v~~l~s~~~~~~tG~~i~id  293 (305)
                       ++|+|+|+.++||+++...++++++ .++
T Consensus       214 ~~~pedvA~~v~~l~s~~~~~~~~~i-~i~  242 (247)
T 2jah_A          214 KLQAQDIAEAVRYAVTAPHHATVHEI-FIR  242 (247)
T ss_dssp             CBCHHHHHHHHHHHHHSCTTEEEEEE-EEE
T ss_pred             CCCHHHHHHHHHHHhCCCccCccceE-Eec
Confidence             8999999999999999988888875 444

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=100.00  E-value=4e-43  Score=317.46  Aligned_cols=265  Identities=20%  Similarity=0.254  Sum_probs=203.6

Q ss_pred             CCCEEEEecCCC--chHHHHHHHHHHcCCeEEEEecCc---------chhhhHhhhc-----CCCCeEEEEecCCCH--H
Q 021960           30 EGKVAIITGGAR--GIGEAAVRLFARHGAKVVIADVED---------TLGSVLASTL-----APAPVTFVHCDVSLE--E   91 (305)
Q Consensus        30 ~~k~vlVtGas~--giG~~ia~~l~~~g~~vv~~~r~~---------~~~~~~~~~~-----~~~~v~~~~~D~~d~--~   91 (305)
                      ++|++|||||++  |||+++|+.|+++|++|++.++++         ..........     ....+.++.+|+++.  +
T Consensus         1 ~~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~   80 (329)
T 3lt0_A            1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN   80 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGG
T ss_pred             CCcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchh
Confidence            478999999986  999999999999999999776543         2222222111     112368889999887  7


Q ss_pred             ------------------HHHHHHHHHHHhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHH
Q 021960           92 ------------------DIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAA  153 (305)
Q Consensus        92 ------------------~i~~~~~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~  153 (305)
                                        +++++++++.+.+|+||+||||||....  ...++.+.+.++|++.+++|+.+++++++.++
T Consensus        81 ~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~--~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~  158 (329)
T 3lt0_A           81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKE--VQKDLLNTSRKGYLDALSKSSYSLISLCKYFV  158 (329)
T ss_dssp             GCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTT--TTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHG
T ss_pred             hhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCccccc--CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence                              9999999999999999999999997432  12678889999999999999999999999999


Q ss_pred             HHHHcCCCCEEEEecccccccCCCCCc-cchhhHHHHHHHHHHHHHHHCc-CCcEEEEEeCCccccccchhcccCCCC--
Q 021960          154 RVMINRGGGCIISTASVAGVMGGLGPH-AYTASKHAIVGLTKNAACELGR-YGIRVNCISPFGVATSMLVNAWRNSGD--  229 (305)
Q Consensus       154 ~~~~~~~~~~iv~isS~~~~~~~~~~~-~Y~~sKaa~~~~~~~la~e~~~-~~i~v~~v~PG~v~T~~~~~~~~~~~~--  229 (305)
                      |.|.++  |+||++||.++..+.++.. .|++||+|+++|+++|+.|+++ +||+||+|+||+++|+|..........  
T Consensus       159 p~m~~~--g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~  236 (329)
T 3lt0_A          159 NIMKPQ--SSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYE  236 (329)
T ss_dssp             GGEEEE--EEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHTCC-------
T ss_pred             HHHhhC--CeEEEEeCccccCCCCcchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeechhHhhhhhhccccc
Confidence            999765  8999999999999999986 9999999999999999999998 899999999999999997765321100  


Q ss_pred             -Cchhhhh----------hccCCCcHH---------HHHHHHHHHhhcCCCCCCCCCHHHHHHHHHHhccCCCCceeccE
Q 021960          230 -GEEEDEC----------MNFGIPSQK---------EVRKMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHN  289 (305)
Q Consensus       230 -~~~~~~~----------~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~  289 (305)
                       ..++.+.          ...+.+.++         ..+.+...... ..|.+++.+|+|+|+.++||+|+.++++||++
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~r~~~peevA~~v~fL~s~~a~~itG~~  315 (329)
T 3lt0_A          237 NNTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEK-YAPLRQKLLSTDIGSVASFLLSRESRAITGQT  315 (329)
T ss_dssp             -----------------------------------CHHHHHHHHHHH-HSSSCSCCCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             ccccccccccccccchhhcccccchhhhhhhhcccchhHHHHHHHhh-cCcccCcCCHHHHHHHHHHHhCchhccccCcE
Confidence             0000000          000000000         00111111111 26789999999999999999999999999999


Q ss_pred             EEecCCcccc
Q 021960          290 LVVDGGVTTS  299 (305)
Q Consensus       290 i~idgG~~~~  299 (305)
                      |.+|||+++.
T Consensus       316 i~vdGG~~~~  325 (329)
T 3lt0_A          316 IYVDNGLNIM  325 (329)
T ss_dssp             EEESTTGGGC
T ss_pred             EEEcCCeeEE
Confidence            9999999873

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=100.00  E-value=3e-41  Score=297.55  Aligned_cols=252  Identities=49%  Similarity=0.819  Sum_probs=212.1

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcC-CCCeEEEEecCCCHHHHHHHHHHHHHhcC
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLA-PAPVTFVHCDVSLEEDIENLINSTVSRYG  105 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~-~~~v~~~~~D~~d~~~i~~~~~~~~~~~g  105 (305)
                      .++++|++|||||++|||++++++|+++|++|++++|+....+...+.+. ..++.++.+|++|.++++++++++.+.++
T Consensus        12 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   91 (278)
T 2bgk_A           12 NRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHG   91 (278)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             ccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            45789999999999999999999999999999999998765544443332 23689999999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCC-CCccchh
Q 021960          106 RLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGL-GPHAYTA  184 (305)
Q Consensus       106 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~-~~~~Y~~  184 (305)
                      ++|+||||||.....  ..++.+.+.++|++.+++|+.+++++++.+++.|.+++.++||++||..+..+.+ +...|++
T Consensus        92 ~id~li~~Ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~Y~~  169 (278)
T 2bgk_A           92 KLDIMFGNVGVLSTT--PYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTA  169 (278)
T ss_dssp             CCCEEEECCCCCCSS--CSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTTSCHHHHH
T ss_pred             CCCEEEECCcccCCC--CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCCCCCCcchHH
Confidence            999999999976431  1456778999999999999999999999999999888889999999999998877 7889999


Q ss_pred             hHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCC
Q 021960          185 SKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT  264 (305)
Q Consensus       185 sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (305)
                      +|++++.+++.++.|++++||++++|+||++.|++.......                ..+..+.+   ......+.+++
T Consensus       170 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~----------------~~~~~~~~---~~~~~~~~~~~  230 (278)
T 2bgk_A          170 TKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGV----------------DSSRVEEL---AHQAANLKGTL  230 (278)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSC----------------CHHHHHHH---HHHTCSSCSCC
T ss_pred             HHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhccc----------------chhHHHHh---hhccccccccc
Confidence            999999999999999999999999999999999985433211                01111111   12223456788


Q ss_pred             CCHHHHHHHHHHhccCCCCceeccEEEecCCcccc
Q 021960          265 LRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTS  299 (305)
Q Consensus       265 ~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~  299 (305)
                      .+|+|+|+.++||+++..++++|++|.+|||...+
T Consensus       231 ~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~  265 (278)
T 2bgk_A          231 LRAEDVADAVAYLAGDESKYVSGLNLVIDGGYTRT  265 (278)
T ss_dssp             CCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             CCHHHHHHHHHHHcCcccccCCCCEEEECCccccc
Confidence            99999999999999988889999999999998664

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=100.00  E-value=2.7e-42  Score=300.98  Aligned_cols=241  Identities=20%  Similarity=0.217  Sum_probs=202.0

Q ss_pred             CEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc-CCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEE
Q 021960           32 KVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL-APAPVTFVHCDVSLEEDIENLINSTVSRYGRLDIL  110 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~-~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~l  110 (305)
                      |++|||||++|||+++++.|+++|++|++++|+....+...+.. .+.++..+     |.++++++++++.+.++++|+|
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~-----d~~~v~~~~~~~~~~~g~iD~l   76 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPM-----SEQEPAELIEAVTSAYGQVDVL   76 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEEC-----CCCSHHHHHHHHHHHHSCCCEE
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCcEEEE-----CHHHHHHHHHHHHHHhCCCCEE
Confidence            68999999999999999999999999999999876655443311 12334433     6677888899999999999999


Q ss_pred             EEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhHHHHH
Q 021960          111 YNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIV  190 (305)
Q Consensus       111 i~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKaa~~  190 (305)
                      |||||.....   .++.+.+.++|++.+++|+.+++++++.++|.|.+++.++||++||..+..+.++...|+++|++++
T Consensus        77 v~nAg~~~~~---~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~  153 (254)
T 1zmt_A           77 VSNDIFAPEF---QPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGAC  153 (254)
T ss_dssp             EEECCCCCCC---CCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTTCHHHHHHHHHHH
T ss_pred             EECCCcCCCC---CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccccCCCCchHHHHHHHHHH
Confidence            9999976221   5677889999999999999999999999999998888899999999999999999999999999999


Q ss_pred             HHHHHHHHHHCcCCcEEEEEeCCcc---------ccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCC
Q 021960          191 GLTKNAACELGRYGIRVNCISPFGV---------ATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLK  261 (305)
Q Consensus       191 ~~~~~la~e~~~~~i~v~~v~PG~v---------~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (305)
                      +|+++++.|++++||+||+|+||++         +|+|....                    .+..+.+   ..  ..+.
T Consensus       154 ~~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~~--------------------~~~~~~~---~~--~~p~  208 (254)
T 1zmt_A          154 TLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTN--------------------PEHVAHV---KK--VTAL  208 (254)
T ss_dssp             HHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTC--------------------HHHHHHH---HH--HSSS
T ss_pred             HHHHHHHHHhhhcCcEEEEEecCccccccccccCCCcccccC--------------------hHHHHHH---hc--cCCC
Confidence            9999999999999999999999999         66553210                    1111111   11  2467


Q ss_pred             CCCCCHHHHHHHHHHhccCCCCceeccEEEecCCcccccccccC
Q 021960          262 GTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTSRNCVGL  305 (305)
Q Consensus       262 ~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~~~~~~~  305 (305)
                      +++.+|+|+|+.++||+++.++++||++|.+|||++....|+|+
T Consensus       209 ~~~~~p~dvA~~v~~l~s~~~~~~tG~~~~vdgG~~~~~~~~~~  252 (254)
T 1zmt_A          209 QRLGTQKELGELVAFLASGSCDYLTGQVFWLAGGFPMIERWPGM  252 (254)
T ss_dssp             SSCBCHHHHHHHHHHHHTTSCGGGTTCEEEESTTCCCCCCCTTC
T ss_pred             CCCcCHHHHHHHHHHHhCcccCCccCCEEEECCCchhhccCCCC
Confidence            88899999999999999999999999999999999988888875

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=100.00  E-value=2.7e-41  Score=295.03  Aligned_cols=247  Identities=28%  Similarity=0.445  Sum_probs=209.6

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      +++++|++|||||+||||+++++.|+++|++|++++|+....+...+.+  .+.++.++.+|++|.++++++++++.+.+
T Consensus         9 ~~l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (260)
T 3awd_A            9 LRLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQE   88 (260)
T ss_dssp             GCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            4678999999999999999999999999999999999876544433332  24568999999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCC--ccc
Q 021960          105 GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGP--HAY  182 (305)
Q Consensus       105 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~--~~Y  182 (305)
                      +++|+||||||.....   .++.+.+.+++++.+++|+.+++++++.+.+.|.+++.++||++||.++..+.++.  ..|
T Consensus        89 ~~id~vi~~Ag~~~~~---~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~Y  165 (260)
T 3awd_A           89 GRVDILVACAGICISE---VKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQQQAAY  165 (260)
T ss_dssp             SCCCEEEECCCCCCCS---CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSSCCHHH
T ss_pred             CCCCEEEECCCCCCCC---CCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhcccCCCCCcccc
Confidence            9999999999976421   45677899999999999999999999999999988788999999999998887777  899


Q ss_pred             hhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCC
Q 021960          183 TASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKG  262 (305)
Q Consensus       183 ~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (305)
                      +++|++++.++++++.|++++||++++|+||+++|++....+..                 .+..+.   +..  ..+.+
T Consensus       166 ~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~-----------------~~~~~~---~~~--~~~~~  223 (260)
T 3awd_A          166 NASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRFGMEK-----------------PELYDA---WIA--GTPMG  223 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHHHHTC-----------------HHHHHH---HHH--TCTTS
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhcccCC-----------------hHHHHH---HHh--cCCcC
Confidence            99999999999999999999999999999999999985411110                 111111   111  24667


Q ss_pred             CCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          263 TTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       263 ~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      ++.+|+|+|+.++||+++..++++|++|.+|||++.
T Consensus       224 ~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~  259 (260)
T 3awd_A          224 RVGQPDEVASVVQFLASDAASLMTGAIVNVDAGFTV  259 (260)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTT
T ss_pred             CCCCHHHHHHHHHHHhCchhccCCCcEEEECCceec
Confidence            889999999999999999888999999999999864

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=100.00  E-value=5.6e-42  Score=300.55  Aligned_cols=247  Identities=29%  Similarity=0.443  Sum_probs=188.8

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHh
Q 021960           26 HRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSR  103 (305)
Q Consensus        26 ~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~  103 (305)
                      ..++++|++|||||+||||+++++.|+++|++|++++|+....+...+.+  .+.++.++.+|++|.++++++++++.+.
T Consensus         9 ~~~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   88 (266)
T 1xq1_A            9 RWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSM   88 (266)
T ss_dssp             TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHH
Confidence            34678999999999999999999999999999999999866554433332  2456889999999999999999999999


Q ss_pred             c-CCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccc
Q 021960          104 Y-GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAY  182 (305)
Q Consensus       104 ~-g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y  182 (305)
                      + +++|+||||||....    .++.+.+.++|++.+++|+.+++++++.+++.|.+++.++||++||..+..+.++...|
T Consensus        89 ~~~~id~li~~Ag~~~~----~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y  164 (266)
T 1xq1_A           89 FGGKLDILINNLGAIRS----KPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIY  164 (266)
T ss_dssp             HTTCCSEEEEECCC----------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------CCHH
T ss_pred             hCCCCcEEEECCCCCCC----CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhccCCCCCchH
Confidence            8 899999999997643    46677899999999999999999999999999988888999999999999888889999


Q ss_pred             hhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCC
Q 021960          183 TASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKG  262 (305)
Q Consensus       183 ~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (305)
                      +++|++++.++++++.|++++||++++|+||++.|++.......                  ...+.+.   .  ..+.+
T Consensus       165 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~------------------~~~~~~~---~--~~~~~  221 (266)
T 1xq1_A          165 SATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDD------------------EFKKVVI---S--RKPLG  221 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC----------------------------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhhcCH------------------HHHHHHH---h--cCCCC
Confidence            99999999999999999999999999999999999985432110                  0000010   0  13456


Q ss_pred             CCCCHHHHHHHHHHhccCCCCceeccEEEecCCcccc
Q 021960          263 TTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTS  299 (305)
Q Consensus       263 ~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~  299 (305)
                      ++.+|+|+|+.++||+++..++++|++|.+|||++..
T Consensus       222 ~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~~~~  258 (266)
T 1xq1_A          222 RFGEPEEVSSLVAFLCMPAASYITGQTICVDGGLTVN  258 (266)
T ss_dssp             --CCGGGGHHHHHHHTSGGGTTCCSCEEECCCCEEET
T ss_pred             CCcCHHHHHHHHHHHcCccccCccCcEEEEcCCcccc
Confidence            7889999999999999998889999999999998764

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=5.8e-42  Score=303.25  Aligned_cols=241  Identities=27%  Similarity=0.349  Sum_probs=194.2

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc---CCCCeEEEEecCCCHHHHHHHHHHHHH
Q 021960           26 HRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL---APAPVTFVHCDVSLEEDIENLINSTVS  102 (305)
Q Consensus        26 ~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~---~~~~v~~~~~D~~d~~~i~~~~~~~~~  102 (305)
                      ..+++||++|||||++|||+++|+.|+++|++|++++|+....+...+.+   .+..+.++.+|++|.++++++++++.+
T Consensus        28 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  107 (281)
T 4dry_A           28 KGSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRA  107 (281)
T ss_dssp             ------CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            34678999999999999999999999999999999999877655544433   233468999999999999999999999


Q ss_pred             hcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC--CCEEEEecccccccCCCCCc
Q 021960          103 RYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRG--GGCIISTASVAGVMGGLGPH  180 (305)
Q Consensus       103 ~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~~~iv~isS~~~~~~~~~~~  180 (305)
                      .+|++|+||||||.....   .++.+.+.++|++.+++|+.+++++++.+++.|.+++  .|+||++||..+..+.++..
T Consensus       108 ~~g~iD~lvnnAG~~~~~---~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~  184 (281)
T 4dry_A          108 EFARLDLLVNNAGSNVPP---VPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPRPNSA  184 (281)
T ss_dssp             HHSCCSEEEECCCCCCCC---CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCCCTTCH
T ss_pred             HcCCCCEEEECCCCCCCC---CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCCCCCCh
Confidence            999999999999976432   5678899999999999999999999999999998875  68999999999999999999


Q ss_pred             cchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCC
Q 021960          181 AYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNL  260 (305)
Q Consensus       181 ~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (305)
                      .|+++|+++++|+++++.|++++||+||+|+||+++|+|.....+.....                         ....+
T Consensus       185 ~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~-------------------------~~~~~  239 (281)
T 4dry_A          185 PYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTARMSTGVLQA-------------------------NGEVA  239 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC-------CEEECT-------------------------TSCEE
T ss_pred             hHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhhhhcchhhhh-------------------------hhccc
Confidence            99999999999999999999999999999999999999865432110000                         00134


Q ss_pred             CCCCCCHHHHHHHHHHhccCCCC-ceeccEEEecC
Q 021960          261 KGTTLRSKDIAEAALYLASDESR-YVSGHNLVVDG  294 (305)
Q Consensus       261 ~~~~~~~~dva~~v~~l~s~~~~-~~tG~~i~idg  294 (305)
                      .+++++|||+|+.++||+|.... .+++.+|....
T Consensus       240 ~~~~~~pedvA~~v~fL~s~~~~~~i~~~~i~p~~  274 (281)
T 4dry_A          240 AEPTIPIEHIAEAVVYMASLPLSANVLTMTVMATR  274 (281)
T ss_dssp             ECCCBCHHHHHHHHHHHHHSCTTEEEEEEEEEETT
T ss_pred             ccCCCCHHHHHHHHHHHhCCCccCccccEEEEecc
Confidence            56788999999999999996654 45555555443

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=100.00  E-value=1.5e-41  Score=297.34  Aligned_cols=247  Identities=30%  Similarity=0.483  Sum_probs=205.3

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcC--C-------CCeEEEEecCCCHHHHHHHH
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLA--P-------APVTFVHCDVSLEEDIENLI   97 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~--~-------~~v~~~~~D~~d~~~i~~~~   97 (305)
                      .++++|++|||||+||||+++++.|+++|++|++++|+....+...+.+.  +       .++.++.+|++|.+++++++
T Consensus         3 ~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   82 (264)
T 2pd6_A            3 NRLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLL   82 (264)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHH
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHH
Confidence            46789999999999999999999999999999999998766555443331  1       46889999999999999999


Q ss_pred             HHHHHhcCCc-cEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-CCEEEEecccccccC
Q 021960           98 NSTVSRYGRL-DILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRG-GGCIISTASVAGVMG  175 (305)
Q Consensus        98 ~~~~~~~g~i-d~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~  175 (305)
                      +.+.+.++++ |+||||||....    .++.+.+.+++++.+++|+.+++++++.+.+.|.+++ .++||++||..+..+
T Consensus        83 ~~~~~~~g~i~d~vi~~Ag~~~~----~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~  158 (264)
T 2pd6_A           83 EQVQACFSRPPSVVVSCAGITQD----EFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVG  158 (264)
T ss_dssp             HHHHHHHSSCCSEEEECCCCCCC----BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHC
T ss_pred             HHHHHHhCCCCeEEEECCCcCCC----cchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccC
Confidence            9999999998 999999997643    5677889999999999999999999999999998776 789999999999999


Q ss_pred             CCCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHh
Q 021960          176 GLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVS  255 (305)
Q Consensus       176 ~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (305)
                      .++...|+++|++++.+++.++.|++++||++++|+||++.|++.....+.                      ....+..
T Consensus       159 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~----------------------~~~~~~~  216 (264)
T 2pd6_A          159 NVGQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKVPQK----------------------VVDKITE  216 (264)
T ss_dssp             CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC--------------------------------CTGG
T ss_pred             CCCChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhhcCHH----------------------HHHHHHH
Confidence            999999999999999999999999999999999999999999985421100                      0001111


Q ss_pred             hcCCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCcccccc
Q 021960          256 GLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTSRN  301 (305)
Q Consensus       256 ~~~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~~~  301 (305)
                        ..+.+++.+|+|+|+.+++++++...+++|+++.+|||+.+..+
T Consensus       217 --~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~  260 (264)
T 2pd6_A          217 --MIPMGHLGDPEDVADVVAFLASEDSGYITGTSVEVTGGLFMAEN  260 (264)
T ss_dssp             --GCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC-----
T ss_pred             --hCCCCCCCCHHHHHHHHHHHcCCcccCCCCCEEEECCCceeccc
Confidence              13557788999999999999998888999999999999877554

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=100.00  E-value=3e-41  Score=293.25  Aligned_cols=244  Identities=35%  Similarity=0.525  Sum_probs=209.1

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcC-CCCeEEEEecCCCHHHHHHHHHHHHHhcCC
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLA-PAPVTFVHCDVSLEEDIENLINSTVSRYGR  106 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~-~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~  106 (305)
                      ++++|++|||||+||||+++++.|+++|++|++++|+....+...+.+. ..++.++.+|++|.++++++++++.+.+++
T Consensus         3 ~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (251)
T 1zk4_A            3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGP   82 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            5789999999999999999999999999999999998765554443332 246899999999999999999999999999


Q ss_pred             ccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCC-CEEEEecccccccCCCCCccchhh
Q 021960          107 LDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGG-GCIISTASVAGVMGGLGPHAYTAS  185 (305)
Q Consensus       107 id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~iv~isS~~~~~~~~~~~~Y~~s  185 (305)
                      +|+||||||....    .++.+.+.++|++.+++|+.+++++++.+++.|.+++. ++||++||..+..+.++...|+++
T Consensus        83 id~li~~Ag~~~~----~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  158 (251)
T 1zk4_A           83 VSTLVNNAGIAVN----KSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNAS  158 (251)
T ss_dssp             CCEEEECCCCCCC----CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             CCEEEECCCCCCC----CChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccCCCCCccchHH
Confidence            9999999997643    56677899999999999999999999999999988776 899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHC--cCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCC
Q 021960          186 KHAIVGLTKNAACELG--RYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGT  263 (305)
Q Consensus       186 Kaa~~~~~~~la~e~~--~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (305)
                      |++++.++++++.|+.  ++||++++|+||+++|++.... .                 ....    ..... ...+.++
T Consensus       159 K~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~-~-----------------~~~~----~~~~~-~~~~~~~  215 (251)
T 1zk4_A          159 KGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDL-P-----------------GAEE----AMSQR-TKTPMGH  215 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTS-T-----------------THHH----HHTST-TTCTTSS
T ss_pred             HHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhc-C-----------------chhh----hHHHh-hcCCCCC
Confidence            9999999999999988  8899999999999999985431 0                 0000    00001 1245678


Q ss_pred             CCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          264 TLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       264 ~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      +.+|+|+|+.++||+++..++++|+++.+|||++.
T Consensus       216 ~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~~~  250 (251)
T 1zk4_A          216 IGEPNDIAYICVYLASNESKFATGSEFVVDGGYTA  250 (251)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CcCHHHHHHHHHHHcCcccccccCcEEEECCCccC
Confidence            88999999999999999888999999999999864

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=100.00  E-value=2.9e-41  Score=295.66  Aligned_cols=242  Identities=30%  Similarity=0.416  Sum_probs=203.3

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCC
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGR  106 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~  106 (305)
                      +++++|++|||||++|||+++++.|+++|++|++++|+....+...+.+ +.++.++.+|++|.++++++++++.+.+++
T Consensus         8 ~~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   86 (265)
T 2o23_A            8 RSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL-GNNCVFAPADVTSEKDVQTALALAKGKFGR   86 (265)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH-CTTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHh-CCceEEEEcCCCCHHHHHHHHHHHHHHCCC
Confidence            4678999999999999999999999999999999999877666555444 446899999999999999999999999999


Q ss_pred             ccEEEEcCCCCCCCCCCCccc------CCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC------CCCEEEEeccccccc
Q 021960          107 LDILYNNAGVLGNQRKHKSII------DFDADEFDNVMRVNVKGMALGIKHAARVMINR------GGGCIISTASVAGVM  174 (305)
Q Consensus       107 id~li~nag~~~~~~~~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~------~~~~iv~isS~~~~~  174 (305)
                      +|+||||||....    .++.      +.+.++|++.+++|+.+++++++.+.+.|.++      +.++||++||..+..
T Consensus        87 id~li~~Ag~~~~----~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~  162 (265)
T 2o23_A           87 VDVAVNCAGIAVA----SKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFE  162 (265)
T ss_dssp             CCEEEECCCCCCC----CCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHH
T ss_pred             CCEEEECCccCCC----CccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcC
Confidence            9999999997643    2222      37889999999999999999999999999877      678999999999999


Q ss_pred             CCCCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHH
Q 021960          175 GGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFV  254 (305)
Q Consensus       175 ~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (305)
                      +.++...|+++|++++.++++++.|++++||+|++|+||+++|++.....+                   +..+.+.   
T Consensus       163 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-------------------~~~~~~~---  220 (265)
T 2o23_A          163 GQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPE-------------------KVCNFLA---  220 (265)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC-----------------------------CHHH---
T ss_pred             CCCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCccccccCH-------------------HHHHHHH---
Confidence            999999999999999999999999999999999999999999998543110                   0000111   


Q ss_pred             hhcCCCC-CCCCCHHHHHHHHHHhccCCCCceeccEEEecCCcccc
Q 021960          255 SGLGNLK-GTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTS  299 (305)
Q Consensus       255 ~~~~~~~-~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~  299 (305)
                      .  ..+. +++.+|+|+|+.++||++  ..+++|++|.+|||+++.
T Consensus       221 ~--~~~~~~~~~~~~dva~~~~~l~~--~~~~~G~~i~vdgG~~~~  262 (265)
T 2o23_A          221 S--QVPFPSRLGDPAEYAHLVQAIIE--NPFLNGEVIRLDGAIRMQ  262 (265)
T ss_dssp             H--TCSSSCSCBCHHHHHHHHHHHHH--CTTCCSCEEEESTTCCCC
T ss_pred             H--cCCCcCCCCCHHHHHHHHHHHhh--cCccCceEEEECCCEecC
Confidence            1  1344 788899999999999996  368999999999998653

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=100.00  E-value=6.1e-42  Score=296.99  Aligned_cols=237  Identities=20%  Similarity=0.187  Sum_probs=197.2

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHcCCeEEEE-e--cCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 021960           31 GKVAIITGGARGIGEAAVRLFARHGAKVVIA-D--VEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRL  107 (305)
Q Consensus        31 ~k~vlVtGas~giG~~ia~~l~~~g~~vv~~-~--r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~i  107 (305)
                      +|++|||||++|||+++++.|+++|++|+++ +  |+....+...+.+.+       +|+.|.++++++++++.+.++++
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~~~-------~~~~~~~~v~~~~~~~~~~~g~i   73 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESENPG-------TIALAEQKPERLVDATLQHGEAI   73 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHSTT-------EEECCCCCGGGHHHHHGGGSSCE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHhCC-------CcccCHHHHHHHHHHHHHHcCCC
Confidence            5899999999999999999999999999999 6  887665555444311       23347778889999999999999


Q ss_pred             cEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhHH
Q 021960          108 DILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKH  187 (305)
Q Consensus       108 d~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKa  187 (305)
                      |+||||||..... ...++.+.+.++|++.+++|+.+++++++.++|.|.+++.++||++||..+..+.++...|+++|+
T Consensus        74 D~lv~~Ag~~~~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~  152 (244)
T 1zmo_A           74 DTIVSNDYIPRPM-NRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKPLAYNPLYGPARA  152 (244)
T ss_dssp             EEEEECCCCCTTG-GGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTCTTHHHHHH
T ss_pred             CEEEECCCcCCCC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCCCCCCchHHHHHHH
Confidence            9999999975320 003567889999999999999999999999999998888899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCcCCcEEEEEeCCccccccc---hhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCC
Q 021960          188 AIVGLTKNAACELGRYGIRVNCISPFGVATSML---VNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT  264 (305)
Q Consensus       188 a~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (305)
                      ++++|+++++.|++++||+||+|+||+++|+|.   ......                  +..+   .+... ..+.+++
T Consensus       153 a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~------------------~~~~---~~~~~-~~p~~r~  210 (244)
T 1zmo_A          153 ATVALVESAAKTLSRDGILLYAIGPNFFNNPTYFPTSDWENN------------------PELR---ERVDR-DVPLGRL  210 (244)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTTBCHHHHHHC------------------HHHH---HHHHH-HCTTCSC
T ss_pred             HHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcccccccccch------------------HHHH---HHHhc-CCCCCCC
Confidence            999999999999999999999999999999985   321100                  1111   11110 1466788


Q ss_pred             CCHHHHHHHHHHhccCCCCceeccEEEecCCcc
Q 021960          265 LRSKDIAEAALYLASDESRYVSGHNLVVDGGVT  297 (305)
Q Consensus       265 ~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~  297 (305)
                      .+|+|+|+.++||+++.++++||++|.+|||++
T Consensus       211 ~~pe~vA~~v~~l~s~~~~~~tG~~i~vdgG~~  243 (244)
T 1zmo_A          211 GRPDEMGALITFLASRRAAPIVGQFFAFTGGYL  243 (244)
T ss_dssp             BCHHHHHHHHHHHHTTTTGGGTTCEEEESTTCC
T ss_pred             cCHHHHHHHHHHHcCccccCccCCEEEeCCCCC
Confidence            999999999999999999999999999999964

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=100.00  E-value=1.5e-41  Score=297.26  Aligned_cols=244  Identities=27%  Similarity=0.329  Sum_probs=205.3

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc---CCCCeEEEEecCCCHHHHHHHHHHHHHh
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL---APAPVTFVHCDVSLEEDIENLINSTVSR  103 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~---~~~~v~~~~~D~~d~~~i~~~~~~~~~~  103 (305)
                      .++++|++|||||+||||++++++|+++|++|++++|+........+.+   .+.++.++.+|++|.++++++++++.+.
T Consensus        10 ~~~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   89 (265)
T 1h5q_A           10 ISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDAD   89 (265)
T ss_dssp             ECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHh
Confidence            3578999999999999999999999999999999999654433222221   1456899999999999999999999999


Q ss_pred             cCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-CCEEEEecccccccCCCC----
Q 021960          104 YGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRG-GGCIISTASVAGVMGGLG----  178 (305)
Q Consensus       104 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~----  178 (305)
                      ++++|+||||||....    .++.+.+.+++++.+++|+.+++++++.+++.|.+++ .++||++||..+..+.+.    
T Consensus        90 ~~~id~li~~Ag~~~~----~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~  165 (265)
T 1h5q_A           90 LGPISGLIANAGVSVV----KPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNG  165 (265)
T ss_dssp             SCSEEEEEECCCCCCC----SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETTE
T ss_pred             cCCCCEEEECCCcCCC----CchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhccccccccc
Confidence            9999999999998643    5677889999999999999999999999999998765 489999999988766542    


Q ss_pred             ---CccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHh
Q 021960          179 ---PHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVS  255 (305)
Q Consensus       179 ---~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (305)
                         ...|+++|++++.++++++.|++++||++++|+||+++|++.....                   .+......   .
T Consensus       166 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-------------------~~~~~~~~---~  223 (265)
T 1h5q_A          166 SLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMD-------------------KKIRDHQA---S  223 (265)
T ss_dssp             ECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSC-------------------HHHHHHHH---H
T ss_pred             cccccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCccccccccccc-------------------hhHHHHHH---h
Confidence               6789999999999999999999999999999999999999854320                   01111111   1


Q ss_pred             hcCCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          256 GLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       256 ~~~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                        ..+.+++.+|+|+|+.++||+++..++++|++|.+|||+++
T Consensus       224 --~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~~~  264 (265)
T 1h5q_A          224 --NIPLNRFAQPEEMTGQAILLLSDHATYMTGGEYFIDGGQLI  264 (265)
T ss_dssp             --TCTTSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEECTTGGG
T ss_pred             --cCcccCCCCHHHHHHHHHhhccCchhcCcCcEEEecCCEeC
Confidence              24667888999999999999999888999999999999864

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=100.00  E-value=1.4e-41  Score=292.75  Aligned_cols=229  Identities=26%  Similarity=0.274  Sum_probs=198.9

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc---CCCCeEEEEecCCCHHHHHHHHHHHHHhcCC
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL---APAPVTFVHCDVSLEEDIENLINSTVSRYGR  106 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~---~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~  106 (305)
                      ++|++|||||++|||+++|++|+++|++|++++|+....+...+.+   .+.++.++.+|++|.++++++++++.+.+++
T Consensus         1 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   80 (235)
T 3l77_A            1 EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGD   80 (235)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCC
Confidence            3689999999999999999999999999999999877655544332   2567999999999999999999999999999


Q ss_pred             ccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhH
Q 021960          107 LDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASK  186 (305)
Q Consensus       107 id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  186 (305)
                      +|+||||||....    .++.+.+.++|++.+++|+.+++++++.++|.| ++..+++|++||..+..+.++...|+++|
T Consensus        81 id~li~~Ag~~~~----~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~-~~~~~~ii~~sS~~~~~~~~~~~~Y~~sK  155 (235)
T 3l77_A           81 VDVVVANAGLGYF----KRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSL-KRTGGLALVTTSDVSARLIPYGGGYVSTK  155 (235)
T ss_dssp             CSEEEECCCCCCC----CCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHH-HHHTCEEEEECCGGGSSCCTTCHHHHHHH
T ss_pred             CCEEEECCccccc----cCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHH-hhcCCcEEEEecchhcccCCCcchHHHHH
Confidence            9999999998643    677888999999999999999999999999999 44568899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCC
Q 021960          187 HAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLR  266 (305)
Q Consensus       187 aa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (305)
                      +++++|+++++.+  .+||+|++|+||+++|+|.......                                ....++.+
T Consensus       156 aa~~~~~~~l~~~--~~~i~v~~v~PG~v~T~~~~~~~~~--------------------------------~~~~~~~~  201 (235)
T 3l77_A          156 WAARALVRTFQIE--NPDVRFFELRPGAVDTYFGGSKPGK--------------------------------PKEKGYLK  201 (235)
T ss_dssp             HHHHHHHHHHHHH--CTTSEEEEEEECSBSSSTTTCCSCC--------------------------------CGGGTCBC
T ss_pred             HHHHHHHHHHhhc--CCCeEEEEEeCCccccccccccCCc--------------------------------ccccCCCC
Confidence            9999999999544  6799999999999999986543211                                11125678


Q ss_pred             HHHHHHHHHHhccCCCCceeccEEEecCCcc
Q 021960          267 SKDIAEAALYLASDESRYVSGHNLVVDGGVT  297 (305)
Q Consensus       267 ~~dva~~v~~l~s~~~~~~tG~~i~idgG~~  297 (305)
                      |+|+|+.++||+++..++++|+++..|+|..
T Consensus       202 p~dva~~v~~l~~~~~~~~~~~~~~~~~~~~  232 (235)
T 3l77_A          202 PDEIAEAVRCLLKLPKDVRVEELMLRSVYQR  232 (235)
T ss_dssp             HHHHHHHHHHHHTSCTTCCCCEEEECCTTSC
T ss_pred             HHHHHHHHHHHHcCCCCCccceEEEeecccC
Confidence            9999999999999999999999999999974

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=100.00  E-value=2.2e-41  Score=300.06  Aligned_cols=243  Identities=29%  Similarity=0.453  Sum_probs=206.3

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      ..+++|++|||||+||||+++++.|+++|++|++++|+....+.+.+.+  .+.++.++.+|++|.++++++++++.+.+
T Consensus        40 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~  119 (285)
T 2c07_A           40 YCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEH  119 (285)
T ss_dssp             CCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred             ccCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhc
Confidence            3567899999999999999999999999999999988766554443333  24568899999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchh
Q 021960          105 GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTA  184 (305)
Q Consensus       105 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~  184 (305)
                      +++|+||||||....    .++.+.+.+++++.+++|+.+++++++.+++.|.+++.++||++||..+..+.++...|++
T Consensus       120 ~~id~li~~Ag~~~~----~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~a  195 (285)
T 2c07_A          120 KNVDILVNNAGITRD----NLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSS  195 (285)
T ss_dssp             SCCCEEEECCCCCCC----CCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHH
T ss_pred             CCCCEEEECCCCCCC----CchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCCCchHHH
Confidence            999999999998643    5677889999999999999999999999999998877899999999999999899999999


Q ss_pred             hHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCC
Q 021960          185 SKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT  264 (305)
Q Consensus       185 sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (305)
                      +|++++.++++++.|+++.||+|++|+||+++|++.....                   +...+.   +..  ..+.+++
T Consensus       196 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-------------------~~~~~~---~~~--~~~~~~~  251 (285)
T 2c07_A          196 SKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKIS-------------------EQIKKN---IIS--NIPAGRM  251 (285)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CC-------------------HHHHHH---HHT--TCTTSSC
T ss_pred             HHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhhcC-------------------HHHHHH---HHh--hCCCCCC
Confidence            9999999999999999999999999999999999853210                   111111   111  2456788


Q ss_pred             CCHHHHHHHHHHhccCCCCceeccEEEecCCcc
Q 021960          265 LRSKDIAEAALYLASDESRYVSGHNLVVDGGVT  297 (305)
Q Consensus       265 ~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~  297 (305)
                      .+|+|+|+.++||+++..++++|++|.+|||++
T Consensus       252 ~~~~dvA~~~~~l~~~~~~~~~G~~i~v~gG~~  284 (285)
T 2c07_A          252 GTPEEVANLACFLSSDKSGYINGRVFVIDGGLS  284 (285)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSC
T ss_pred             CCHHHHHHHHHHHhCCCcCCCCCCEEEeCCCcc
Confidence            999999999999999988899999999999975

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=100.00  E-value=6.7e-42  Score=299.20  Aligned_cols=243  Identities=22%  Similarity=0.256  Sum_probs=201.8

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHH---cCCeEEEEecCcchhhhHhhhc----CCCCeEEEEecCCCHHHHHHHHHHH
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFAR---HGAKVVIADVEDTLGSVLASTL----APAPVTFVHCDVSLEEDIENLINST  100 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~---~g~~vv~~~r~~~~~~~~~~~~----~~~~v~~~~~D~~d~~~i~~~~~~~  100 (305)
                      +|++|++|||||++|||+++++.|++   +|++|++++|+....+...+.+    .+.++.++.+|++|.++++++++++
T Consensus         3 ~l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   82 (259)
T 1oaa_A            3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAV   82 (259)
T ss_dssp             CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHH
Confidence            57899999999999999999999999   8999999999876655544333    2456899999999999999999999


Q ss_pred             HH--hcCCcc--EEEEcCCCCCCCCCCCcccC-CCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC--CCCEEEEecccccc
Q 021960          101 VS--RYGRLD--ILYNNAGVLGNQRKHKSIID-FDADEFDNVMRVNVKGMALGIKHAARVMINR--GGGCIISTASVAGV  173 (305)
Q Consensus       101 ~~--~~g~id--~li~nag~~~~~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~~~iv~isS~~~~  173 (305)
                      .+  .+|++|  +||||||.....  ..++.+ .+.++|++.+++|+.+++++++.++|.|.++  +.|+||++||.++.
T Consensus        83 ~~~~~~g~~d~~~lvnnAg~~~~~--~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~  160 (259)
T 1oaa_A           83 RELPRPEGLQRLLLINNAATLGDV--SKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCAL  160 (259)
T ss_dssp             HHSCCCTTCCEEEEEECCCCCCCC--SSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGT
T ss_pred             HhccccccCCccEEEECCcccCCC--CcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhc
Confidence            88  678899  999999975321  134666 6899999999999999999999999999776  56899999999999


Q ss_pred             cCCCCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHH
Q 021960          174 MGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEF  253 (305)
Q Consensus       174 ~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (305)
                      .+.++...|++||+++++|+++++.|+++  |+||+|+||+++|+|........              ..++..+.+.. 
T Consensus       161 ~~~~~~~~Y~asKaa~~~~~~~la~e~~~--i~vn~v~PG~v~T~~~~~~~~~~--------------~~~~~~~~~~~-  223 (259)
T 1oaa_A          161 QPYKGWGLYCAGKAARDMLYQVLAAEEPS--VRVLSYAPGPLDNDMQQLARETS--------------KDPELRSKLQK-  223 (259)
T ss_dssp             SCCTTCHHHHHHHHHHHHHHHHHHHHCTT--EEEEEEECCSBSSHHHHHHHHHC--------------SCHHHHHHHHH-
T ss_pred             CCCCCccHHHHHHHHHHHHHHHHHhhCCC--ceEEEecCCCcCcchHHHHhhcc--------------CChhHHHHHHH-
Confidence            99999999999999999999999999963  99999999999999865432110              00111111111 


Q ss_pred             HhhcCCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecC
Q 021960          254 VSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDG  294 (305)
Q Consensus       254 ~~~~~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idg  294 (305)
                          ..+.+++.+|+|+|+.++||+++ .+++||++|.+||
T Consensus       224 ----~~p~~~~~~p~dvA~~v~~l~~~-~~~itG~~i~vdg  259 (259)
T 1oaa_A          224 ----LKSDGALVDCGTSAQKLLGLLQK-DTFQSGAHVDFYD  259 (259)
T ss_dssp             ----HHHTTCSBCHHHHHHHHHHHHHH-CCSCTTEEEETTC
T ss_pred             ----hhhcCCcCCHHHHHHHHHHHHhh-ccccCCcEEeccC
Confidence                13457889999999999999986 6899999999996

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=100.00  E-value=5.6e-41  Score=290.43  Aligned_cols=240  Identities=29%  Similarity=0.402  Sum_probs=203.3

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCC
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGR  106 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~  106 (305)
                      +++++|++|||||+||||+++++.|+++|++|++++|+....+.+.+...  .+.++.+|++|.++++++++    .+++
T Consensus         3 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~----~~~~   76 (244)
T 3d3w_A            3 LFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP--GIEPVCVDLGDWEATERALG----SVGP   76 (244)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST--TCEEEECCTTCHHHHHHHHT----TCCC
T ss_pred             cccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcC--CCCEEEEeCCCHHHHHHHHH----HcCC
Confidence            46789999999999999999999999999999999998766555444332  35677999999999988776    5678


Q ss_pred             ccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-CCEEEEecccccccCCCCCccchhh
Q 021960          107 LDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRG-GGCIISTASVAGVMGGLGPHAYTAS  185 (305)
Q Consensus       107 id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~~s  185 (305)
                      +|+||||||....    .++.+.+.+++++.+++|+.+++++++.+.+.|.+++ .++||++||..+..+.++...|+++
T Consensus        77 id~vi~~Ag~~~~----~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~s  152 (244)
T 3d3w_A           77 VDLLVNNAAVALL----QPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCST  152 (244)
T ss_dssp             CCEEEECCCCCCC----BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred             CCEEEECCccCCC----cchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccCCCCCchHHHH
Confidence            9999999997643    5677889999999999999999999999999998776 7999999999999998899999999


Q ss_pred             HHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCC
Q 021960          186 KHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL  265 (305)
Q Consensus       186 Kaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (305)
                      |++++.++++++.|++++||++++|+||++.|++....+..               +  ...+.+   ..  ..+.+++.
T Consensus       153 K~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~---------------~--~~~~~~---~~--~~~~~~~~  210 (244)
T 3d3w_A          153 KGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSD---------------P--HKAKTM---LN--RIPLGKFA  210 (244)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHHSCS---------------T--THHHHH---HH--TCTTCSCB
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEEeccccccchhhhccC---------------h--HHHHHH---Hh--hCCCCCCc
Confidence            99999999999999999999999999999999986543221               0  111111   11  24667889


Q ss_pred             CHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          266 RSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       266 ~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      +|+|+|+.++|++++...+++|++|.+|||++.
T Consensus       211 ~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~~~  243 (244)
T 3d3w_A          211 EVEHVVNAILFLLSDRSGMTTGSTLPVEGGFWA  243 (244)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CHHHHHHHHHHHcCccccCCCCCEEEECCCccC
Confidence            999999999999998888999999999999864

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=100.00  E-value=3.3e-41  Score=292.34  Aligned_cols=242  Identities=28%  Similarity=0.445  Sum_probs=208.1

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc---CCCCeEEEEecCCCHHHHHHHHHHHHHh
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL---APAPVTFVHCDVSLEEDIENLINSTVSR  103 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~---~~~~v~~~~~D~~d~~~i~~~~~~~~~~  103 (305)
                      .++++|++|||||+||||+++++.|+++|++|++++|+....+.+.+.+   .+.++.++.+|++|.++++++++++.+.
T Consensus         3 ~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   82 (248)
T 2pnf_A            3 IKLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNL   82 (248)
T ss_dssp             CCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence            4578999999999999999999999999999999999876554443322   2456899999999999999999999999


Q ss_pred             cCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccch
Q 021960          104 YGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYT  183 (305)
Q Consensus       104 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~  183 (305)
                      ++++|+||||||....    .++.+.+.+++++.+++|+.+++++++.+++.|.+++.++||++||..+..+.++...|+
T Consensus        83 ~~~~d~vi~~Ag~~~~----~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~  158 (248)
T 2pnf_A           83 VDGIDILVNNAGITRD----KLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNVGQVNYS  158 (248)
T ss_dssp             SSCCSEEEECCCCCCC----CCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHHCCTTCHHHH
T ss_pred             cCCCCEEEECCCCCCC----CccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcCCCCCCchHH
Confidence            9999999999997643    456778999999999999999999999999999888889999999999888888899999


Q ss_pred             hhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCC
Q 021960          184 ASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGT  263 (305)
Q Consensus       184 ~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (305)
                      ++|++++.+++.++.|++++||++++|+||+++|++....                  + +...+.+.   .  ..+.++
T Consensus       159 ~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~------------------~-~~~~~~~~---~--~~~~~~  214 (248)
T 2pnf_A          159 TTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAVL------------------S-EEIKQKYK---E--QIPLGR  214 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGS------------------C-HHHHHHHH---H--TCTTSS
T ss_pred             HHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhhc------------------c-HHHHHHHH---h--cCCCCC
Confidence            9999999999999999999999999999999999985421                  0 01111111   1  245677


Q ss_pred             CCCHHHHHHHHHHhccCCCCceeccEEEecCCc
Q 021960          264 TLRSKDIAEAALYLASDESRYVSGHNLVVDGGV  296 (305)
Q Consensus       264 ~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~  296 (305)
                      +.+|+|+|+.++|++++..++++|+++.+|||+
T Consensus       215 ~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~  247 (248)
T 2pnf_A          215 FGSPEEVANVVLFLCSELASYITGEVIHVNGGM  247 (248)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             ccCHHHHHHHHHHHhCchhhcCCCcEEEeCCCc
Confidence            889999999999999988889999999999996

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=100.00  E-value=1.8e-41  Score=293.91  Aligned_cols=242  Identities=31%  Similarity=0.531  Sum_probs=186.9

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEE-ecCcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIA-DVEDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~-~r~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      ++++|++|||||+||||++++++|+++|++|+++ +|+....+...+.+  .+.++.++.+|++|.++++++++++.+.+
T Consensus         2 ~l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (247)
T 2hq1_A            2 QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAF   81 (247)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            4678999999999999999999999999999998 56655444333322  24568999999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchh
Q 021960          105 GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTA  184 (305)
Q Consensus       105 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~  184 (305)
                      +++|+||||||....    .++.+.+.+++++.+++|+.+++++++.+++.|.+++.++||++||..+..+.++...|++
T Consensus        82 ~~~d~vi~~Ag~~~~----~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~  157 (247)
T 2hq1_A           82 GRIDILVNNAGITRD----TLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGNAGQANYAA  157 (247)
T ss_dssp             SCCCEEEECC-------------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC---------CHHHHH
T ss_pred             CCCCEEEECCCCCCC----CccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCCcHhHH
Confidence            999999999997643    4566778899999999999999999999999998888899999999999988889999999


Q ss_pred             hHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCC
Q 021960          185 SKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT  264 (305)
Q Consensus       185 sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (305)
                      +|++++.++++++.|++.+||++++|+||+++|++....                  + +...+.   +..  ..+.+++
T Consensus       158 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~------------------~-~~~~~~---~~~--~~~~~~~  213 (247)
T 2hq1_A          158 SKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDVL------------------P-DKVKEM---YLN--NIPLKRF  213 (247)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS------------------C-HHHHHH---HHT--TSTTSSC
T ss_pred             HHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchhhc------------------c-hHHHHH---HHh--hCCCCCC
Confidence            999999999999999999999999999999999975321                  0 111111   111  2456788


Q ss_pred             CCHHHHHHHHHHhccCCCCceeccEEEecCCcc
Q 021960          265 LRSKDIAEAALYLASDESRYVSGHNLVVDGGVT  297 (305)
Q Consensus       265 ~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~  297 (305)
                      .+++|+|+.+.+|+++..++++|++|++|||++
T Consensus       214 ~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~~  246 (247)
T 2hq1_A          214 GTPEEVANVVGFLASDDSNYITGQVINIDGGLV  246 (247)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC-
T ss_pred             CCHHHHHHHHHHHcCcccccccCcEEEeCCCcc
Confidence            899999999999999888899999999999975

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=100.00  E-value=6.6e-41  Score=291.59  Aligned_cols=245  Identities=33%  Similarity=0.468  Sum_probs=209.4

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      .++++|++|||||+||||+++++.|+++|++|++++|+....+...+.+  .+.++.++.+|++|.++++++++++.+.+
T Consensus         7 ~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   86 (255)
T 1fmc_A            7 LRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKL   86 (255)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhc
Confidence            4578999999999999999999999999999999999876554433332  24568899999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchh
Q 021960          105 GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTA  184 (305)
Q Consensus       105 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~  184 (305)
                      +++|+||||||....    .++ +.+.+++++.+++|+.+++++++.+++.|.+++.++||++||..+..+.++...|++
T Consensus        87 ~~~d~vi~~Ag~~~~----~~~-~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~  161 (255)
T 1fmc_A           87 GKVDILVNNAGGGGP----KPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYAS  161 (255)
T ss_dssp             SSCCEEEECCCCCCC----CCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHH
T ss_pred             CCCCEEEECCCCCCC----CCC-CCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCCCcccHH
Confidence            999999999997643    333 678999999999999999999999999998888899999999999998889999999


Q ss_pred             hHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCC
Q 021960          185 SKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT  264 (305)
Q Consensus       185 sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (305)
                      +|++++.+++.++.|++++||++++|+||++.|++......                  .+..+.+   ..  ..+.+++
T Consensus       162 sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~~~------------------~~~~~~~---~~--~~~~~~~  218 (255)
T 1fmc_A          162 SKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVIT------------------PEIEQKM---LQ--HTPIRRL  218 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCC------------------HHHHHHH---HH--TCSSCSC
T ss_pred             HHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhhccC------------------hHHHHHH---Hh--cCCcccC
Confidence            99999999999999999999999999999999998543210                  1111111   11  2567788


Q ss_pred             CCHHHHHHHHHHhccCCCCceeccEEEecCCcccc
Q 021960          265 LRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTS  299 (305)
Q Consensus       265 ~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~  299 (305)
                      ++|+|+|+.++||+++...+++|++|++|||...+
T Consensus       219 ~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~s  253 (255)
T 1fmc_A          219 GQPQDIANAALFLCSPAASWVSGQILTVSGGGVQE  253 (255)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSCCC
T ss_pred             CCHHHHHHHHHHHhCCccccCCCcEEEECCceecc
Confidence            99999999999999988889999999999997654

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=100.00  E-value=1.3e-41  Score=319.26  Aligned_cols=244  Identities=29%  Similarity=0.395  Sum_probs=204.2

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCC
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGR  106 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~  106 (305)
                      ..+++|++|||||++|||+++|+.|+++|++|++++|+..... +.+......+.++.||++|.++++++++++.+.++.
T Consensus       209 ~~l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~-l~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~g~  287 (454)
T 3u0b_A          209 KPLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAED-LKRVADKVGGTALTLDVTADDAVDKITAHVTEHHGG  287 (454)
T ss_dssp             STTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGHHH-HHHHHHHHTCEEEECCTTSTTHHHHHHHHHHHHSTT
T ss_pred             cCCCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccHHH-HHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHHcCC
Confidence            4568999999999999999999999999999999998654322 222111123678999999999999999999999986


Q ss_pred             -ccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhh
Q 021960          107 -LDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTAS  185 (305)
Q Consensus       107 -id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  185 (305)
                       ||+||||||....    ..+.+.+.++|++.+++|+.+++++.+.+.+.|.+++.++||++||.++..+.+++..|+++
T Consensus       288 ~id~lV~nAGv~~~----~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g~~g~~~Yaas  363 (454)
T 3u0b_A          288 KVDILVNNAGITRD----KLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNRGQTNYATT  363 (454)
T ss_dssp             CCSEEEECCCCCCC----CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHCCTTCHHHHHH
T ss_pred             CceEEEECCcccCC----CccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCCCCCCHHHHHH
Confidence             9999999998754    57888999999999999999999999999999888788999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCC
Q 021960          186 KHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL  265 (305)
Q Consensus       186 Kaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (305)
                      |+++++|+++++.|++++||+||+|+||+++|+|.......                ..+   ...    . ..+.++..
T Consensus       364 Kaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~----------------~~~---~~~----~-~~~l~r~g  419 (454)
T 3u0b_A          364 KAGMIGLAEALAPVLADKGITINAVAPGFIETKMTEAIPLA----------------TRE---VGR----R-LNSLFQGG  419 (454)
T ss_dssp             HHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC--------------------------CH---HHH----H-SBTTSSCB
T ss_pred             HHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhhcchh----------------hHH---HHH----h-hccccCCC
Confidence            99999999999999999999999999999999986432111                000   011    1 24567788


Q ss_pred             CHHHHHHHHHHhccCCCCceeccEEEecCCcccc
Q 021960          266 RSKDIAEAALYLASDESRYVSGHNLVVDGGVTTS  299 (305)
Q Consensus       266 ~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~  299 (305)
                      +|+|+|+.+.||+|+.++++||++|.+|||..+.
T Consensus       420 ~pedvA~~v~fL~s~~a~~itG~~i~vdGG~~lG  453 (454)
T 3u0b_A          420 QPVDVAELIAYFASPASNAVTGNTIRVCGQAMLG  453 (454)
T ss_dssp             CHHHHHHHHHHHHCGGGTTCCSCEEEESSSBSCC
T ss_pred             CHHHHHHHHHHHhCCccCCCCCcEEEECCccccc
Confidence            9999999999999999999999999999998753

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=100.00  E-value=3.4e-41  Score=291.70  Aligned_cols=239  Identities=28%  Similarity=0.498  Sum_probs=204.2

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHcCCeEEEE-ecCcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 021960           31 GKVAIITGGARGIGEAAVRLFARHGAKVVIA-DVEDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRYGRL  107 (305)
Q Consensus        31 ~k~vlVtGas~giG~~ia~~l~~~g~~vv~~-~r~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~i  107 (305)
                      ||++|||||+||||++++++|+++|++|+++ +|+....+.+.+.+  .+.++.++.+|++|.++++++++++.+.++++
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   80 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTI   80 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            5899999999999999999999999999984 77765544433322  13468899999999999999999999999999


Q ss_pred             cEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhHH
Q 021960          108 DILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKH  187 (305)
Q Consensus       108 d~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKa  187 (305)
                      |+||||||....    .++.+.+.+++++.+++|+.+++++++.+++.|.+++.++||++||..+..+.++...|+++|+
T Consensus        81 d~li~~Ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~  156 (244)
T 1edo_A           81 DVVVNNAGITRD----TLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKA  156 (244)
T ss_dssp             SEEEECCCCCCC----CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHH
T ss_pred             CEEEECCCCCCC----cCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCCCCCCccchhhHH
Confidence            999999997643    5667789999999999999999999999999998888899999999999999899999999999


Q ss_pred             HHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCCH
Q 021960          188 AIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRS  267 (305)
Q Consensus       188 a~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (305)
                      +++.+++.++.|+.++||++++|+||+++|++.....                   +...+.   +..  ..+.+++.+|
T Consensus       157 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-------------------~~~~~~---~~~--~~~~~~~~~~  212 (244)
T 1edo_A          157 GVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLG-------------------EDMEKK---ILG--TIPLGRTGQP  212 (244)
T ss_dssp             HHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTC-------------------HHHHHH---HHT--SCTTCSCBCH
T ss_pred             HHHHHHHHHHHHhhhcCCEEEEEeeCccccchhhhcC-------------------hHHHHH---Hhh--cCCCCCCCCH
Confidence            9999999999999999999999999999999854310                   011111   111  2466788999


Q ss_pred             HHHHHHHHHhc-cCCCCceeccEEEecCCcc
Q 021960          268 KDIAEAALYLA-SDESRYVSGHNLVVDGGVT  297 (305)
Q Consensus       268 ~dva~~v~~l~-s~~~~~~tG~~i~idgG~~  297 (305)
                      +|+|+.++||+ ++..++++|++|.+|||++
T Consensus       213 ~dva~~~~~l~~~~~~~~~~G~~~~v~gG~~  243 (244)
T 1edo_A          213 ENVAGLVEFLALSPAASYITGQAFTIDGGIA  243 (244)
T ss_dssp             HHHHHHHHHHHHCSGGGGCCSCEEEESTTTT
T ss_pred             HHHHHHHHHHhCCCccCCcCCCEEEeCCCcc
Confidence            99999999999 7778899999999999975

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=100.00  E-value=1.8e-41  Score=290.05  Aligned_cols=220  Identities=25%  Similarity=0.295  Sum_probs=188.1

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRL  107 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~i  107 (305)
                      ++++|++|||||++|||+++++.|+++|++|++++|+..                  +|++|.++++++++++    +++
T Consensus         3 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~------------------~D~~~~~~v~~~~~~~----g~i   60 (223)
T 3uce_A            3 GSDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG------------------LDISDEKSVYHYFETI----GAF   60 (223)
T ss_dssp             --CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT------------------CCTTCHHHHHHHHHHH----CSE
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc------------------cCCCCHHHHHHHHHHh----CCC
Confidence            568999999999999999999999999999999998753                  7999999999988765    889


Q ss_pred             cEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhHH
Q 021960          108 DILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKH  187 (305)
Q Consensus       108 d~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKa  187 (305)
                      |+||||||.....   .++.+.+.++|++.+++|+.+++++++.++|.|.+  .|+||++||..+..+.++...|+++|+
T Consensus        61 d~lv~nAg~~~~~---~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~g~iv~~sS~~~~~~~~~~~~Y~asK~  135 (223)
T 3uce_A           61 DHLIVTAGSYAPA---GKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQ--GGSITLTSGMLSRKVVANTYVKAAINA  135 (223)
T ss_dssp             EEEEECCCCCCCC---SCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEE--EEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             CEEEECCCCCCCC---CCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccC--CeEEEEecchhhccCCCCchHHHHHHH
Confidence            9999999986332   56788899999999999999999999999998854  589999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHH-HHHHHhhcCCCCCCCCC
Q 021960          188 AIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRK-MEEFVSGLGNLKGTTLR  266 (305)
Q Consensus       188 a~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  266 (305)
                      ++++|+++++.|+++  |+||+|+||+++|++......                   +..+. ...+..  ..+.+++.+
T Consensus       136 a~~~~~~~la~e~~~--i~vn~v~PG~v~t~~~~~~~~-------------------~~~~~~~~~~~~--~~~~~~~~~  192 (223)
T 3uce_A          136 AIEATTKVLAKELAP--IRVNAISPGLTKTEAYKGMNA-------------------DDRDAMYQRTQS--HLPVGKVGE  192 (223)
T ss_dssp             HHHHHHHHHHHHHTT--SEEEEEEECSBCSGGGTTSCH-------------------HHHHHHHHHHHH--HSTTCSCBC
T ss_pred             HHHHHHHHHHHhhcC--cEEEEEEeCCCcchhhhhcch-------------------hhHHHHHHHHhh--cCCCCCccC
Confidence            999999999999986  999999999999998643211                   11111 111222  257789999


Q ss_pred             HHHHHHHHHHhccCCCCceeccEEEecCCcccc
Q 021960          267 SKDIAEAALYLASDESRYVSGHNLVVDGGVTTS  299 (305)
Q Consensus       267 ~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~  299 (305)
                      |+|+|+.++||++  ++++||++|.+|||+.++
T Consensus       193 ~~dvA~~~~~l~~--~~~~tG~~i~vdgG~~~s  223 (223)
T 3uce_A          193 ASDIAMAYLFAIQ--NSYMTGTVIDVDGGALLG  223 (223)
T ss_dssp             HHHHHHHHHHHHH--CTTCCSCEEEESTTGGGC
T ss_pred             HHHHHHHHHHHcc--CCCCCCcEEEecCCeecC
Confidence            9999999999998  468999999999998753

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=100.00  E-value=4.3e-41  Score=297.02  Aligned_cols=244  Identities=27%  Similarity=0.369  Sum_probs=205.7

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      +++++|++|||||+||||++++++|+++|++|++++|+....+...+.+  .+.++.++.+|++|.++++++++++.+.+
T Consensus        30 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~  109 (279)
T 3ctm_A           30 FSLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDF  109 (279)
T ss_dssp             GCCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHh
Confidence            4678999999999999999999999999999999999876554443322  14568899999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCCccc-CCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccC--CCCCcc
Q 021960          105 GRLDILYNNAGVLGNQRKHKSII-DFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMG--GLGPHA  181 (305)
Q Consensus       105 g~id~li~nag~~~~~~~~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~--~~~~~~  181 (305)
                      +++|+||||||.....   .++. +.+.++|++.+++|+.+++++++.+++.|.+++.++||++||..+..+  .++...
T Consensus       110 g~id~li~~Ag~~~~~---~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~  186 (279)
T 3ctm_A          110 GTIDVFVANAGVTWTQ---GPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIVNIPQLQAP  186 (279)
T ss_dssp             SCCSEEEECGGGSTTC-----CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSCC---CCHHH
T ss_pred             CCCCEEEECCcccccC---CcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhccCCCCCCccc
Confidence            9999999999976431   3444 678899999999999999999999999998888899999999999887  778889


Q ss_pred             chhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCC
Q 021960          182 YTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLK  261 (305)
Q Consensus       182 Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (305)
                      |+++|++++.++++++.|+++++ +|++|+||+++|++....                  + .+..+.+   ..  ..+.
T Consensus       187 Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~~------------------~-~~~~~~~---~~--~~p~  241 (279)
T 3ctm_A          187 YNTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDFA------------------S-KDMKAKW---WQ--LTPL  241 (279)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSSC------------------C-HHHHHHH---HH--HSTT
T ss_pred             HHHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCcccccccc------------------C-hHHHHHH---HH--hCCc
Confidence            99999999999999999999989 999999999999985210                  0 1111111   11  1466


Q ss_pred             CCCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          262 GTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       262 ~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      +++.+|+|+|+.++||+++..++++|++|.+|||+++
T Consensus       242 ~~~~~~~dvA~~~~~l~s~~~~~~tG~~i~vdgG~~~  278 (279)
T 3ctm_A          242 GREGLTQELVGGYLYLASNASTFTTGSDVVIDGGYTC  278 (279)
T ss_dssp             CSCBCGGGTHHHHHHHHSGGGTTCCSCEEEESTTCCC
T ss_pred             cCCcCHHHHHHHHHHHhCccccCccCCEEEECCCeec
Confidence            7889999999999999999889999999999999864

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=4.3e-41  Score=296.29  Aligned_cols=241  Identities=23%  Similarity=0.355  Sum_probs=195.9

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCC-CCeEEEEecCCCHHHHHHHHHHHHHhcC
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAP-APVTFVHCDVSLEEDIENLINSTVSRYG  105 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~i~~~~~~~~~~~g  105 (305)
                      .+|+ |++|||||++|||+++++.|+++|++|++++|+....+.+.+.+.. .++.++.+|++|.++++++++++.+.++
T Consensus        18 ~~~~-k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   96 (272)
T 2nwq_A           18 SHMS-STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFA   96 (272)
T ss_dssp             ---C-CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGGGS
T ss_pred             CCcC-cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            3556 9999999999999999999999999999999987666555444422 4688999999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCC-EEEEecccccccCCCCCccchh
Q 021960          106 RLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGG-CIISTASVAGVMGGLGPHAYTA  184 (305)
Q Consensus       106 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~-~iv~isS~~~~~~~~~~~~Y~~  184 (305)
                      ++|+||||||.....   .++.+.+.++|++.+++|+.+++++++.+++.|.+++.+ +||++||..+..+.++...|++
T Consensus        97 ~iD~lvnnAG~~~~~---~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~~~~~~~~Y~a  173 (272)
T 2nwq_A           97 TLRGLINNAGLALGT---DPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPYPGSHVYGG  173 (272)
T ss_dssp             SCCEEEECCCCCCCC---CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTSCCTTCHHHHH
T ss_pred             CCCEEEECCCCCCCC---CCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhccCCCCCchHHH
Confidence            999999999975321   467788999999999999999999999999999888778 9999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCC
Q 021960          185 SKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT  264 (305)
Q Consensus       185 sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (305)
                      +|+++++|+++++.|++++||+||+|+||+++|+|....+..  .              .+   ......     .....
T Consensus       174 sKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~--~--------------~~---~~~~~~-----~~~~~  229 (272)
T 2nwq_A          174 TKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLVRFGG--D--------------QA---RYDKTY-----AGAHP  229 (272)
T ss_dssp             HHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC--------------------------------------------CCCC
T ss_pred             HHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcchhccccc--c--------------hH---HHHHhh-----ccCCC
Confidence            999999999999999999999999999999999985322110  0              00   000000     01224


Q ss_pred             CCHHHHHHHHHHhccCCCCceeccEEEecCCc
Q 021960          265 LRSKDIAEAALYLASDESRYVSGHNLVVDGGV  296 (305)
Q Consensus       265 ~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~  296 (305)
                      ++|+|+|+.++||+++ ..+++|+.|.+|+|.
T Consensus       230 ~~pedvA~~v~~l~s~-~~~~~g~~i~v~~~~  260 (272)
T 2nwq_A          230 IQPEDIAETIFWIMNQ-PAHLNINSLEIMPVS  260 (272)
T ss_dssp             BCHHHHHHHHHHHHTS-CTTEEEEEEEEEETT
T ss_pred             CCHHHHHHHHHHHhCC-CccCccceEEEeecc
Confidence            6899999999999997 468999999999984

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=100.00  E-value=7.8e-41  Score=290.78  Aligned_cols=236  Identities=23%  Similarity=0.317  Sum_probs=193.8

Q ss_pred             CEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEEE
Q 021960           32 KVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILY  111 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~li  111 (305)
                      |++|||||++|||+++++.|+++|++|++++|+....+...+.+. .++.++.+|++|.++++++++++.+.++++|+||
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv   79 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELG-DNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILV   79 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC-TTEEEEECCTTCHHHHHHHHHTSCTTTCCCCEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc-CceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEE
Confidence            689999999999999999999999999999998776655554443 4688999999999999999999988999999999


Q ss_pred             EcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhHHHHHH
Q 021960          112 NNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVG  191 (305)
Q Consensus       112 ~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKaa~~~  191 (305)
                      ||||.....   .++.+.+.++|++.+++|+.+++++++.++|.|.+++.++||++||..+..+.++...|+++|+++++
T Consensus        80 nnAg~~~~~---~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~  156 (248)
T 3asu_A           80 NNAGLALGM---EPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQ  156 (248)
T ss_dssp             ECCCCCCCC---SCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHHHHHH
T ss_pred             ECCCcCCCC---CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhccCCCCCchHHHHHHHHHH
Confidence            999975321   46778899999999999999999999999999988888999999999999999999999999999999


Q ss_pred             HHHHHHHHHCcCCcEEEEEeCCccc-cccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCCHHHH
Q 021960          192 LTKNAACELGRYGIRVNCISPFGVA-TSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSKDI  270 (305)
Q Consensus       192 ~~~~la~e~~~~~i~v~~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv  270 (305)
                      |+++++.|++++||+||+|+||+++ |+|....+..  .              .+.   .....     .....++|+|+
T Consensus       157 ~~~~la~e~~~~gi~v~~v~PG~v~gT~~~~~~~~~--~--------------~~~---~~~~~-----~~~~~~~p~dv  212 (248)
T 3asu_A          157 FSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKG--D--------------DGK---AEKTY-----QNTVALTPEDV  212 (248)
T ss_dssp             HHHHHHHHTTTSCCEEEEEEECSBCC----------------------------------------------CCBCHHHH
T ss_pred             HHHHHHHHhhhcCcEEEEEeccccccCcchhhcccC--c--------------hHH---HHHHH-----hccCCCCHHHH
Confidence            9999999999999999999999999 9984321110  0              000   00000     01123589999


Q ss_pred             HHHHHHhccCCCCceeccEEEecCCc
Q 021960          271 AEAALYLASDESRYVSGHNLVVDGGV  296 (305)
Q Consensus       271 a~~v~~l~s~~~~~~tG~~i~idgG~  296 (305)
                      |+.++||+++ ..+++|+.+.++++.
T Consensus       213 A~~v~~l~s~-~~~~~g~~i~v~~~~  237 (248)
T 3asu_A          213 SEAVWWVSTL-PAHVNINTLEMMPVT  237 (248)
T ss_dssp             HHHHHHHHHS-CTTCCCCEEEECCTT
T ss_pred             HHHHHHHhcC-CccceeeEEEEcccc
Confidence            9999999997 468999999999874

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=100.00  E-value=2.9e-40  Score=294.86  Aligned_cols=247  Identities=22%  Similarity=0.340  Sum_probs=206.8

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcC---CCCeEEEEecCCCHHHHHHHHHHHHHh
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLA---PAPVTFVHCDVSLEEDIENLINSTVSR  103 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~i~~~~~~~~~~  103 (305)
                      .++++|++|||||+||||+++++.|+++|++|++++|+....+...+.+.   +.++.++.+|++|.++++++++++.+.
T Consensus        22 ~~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~  101 (302)
T 1w6u_A           22 NSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKV  101 (302)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999998766554433321   456899999999999999999999999


Q ss_pred             cCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-cCCCCEEEEecccccccCCCCCccc
Q 021960          104 YGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMI-NRGGGCIISTASVAGVMGGLGPHAY  182 (305)
Q Consensus       104 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~~iv~isS~~~~~~~~~~~~Y  182 (305)
                      ++++|+||||||....    .++.+.+.+++++.+++|+.+++++++.+++.|. +++.++||++||..+..+.++...|
T Consensus       102 ~g~id~li~~Ag~~~~----~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y  177 (302)
T 1w6u_A          102 AGHPNIVINNAAGNFI----SPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPS  177 (302)
T ss_dssp             TCSCSEEEECCCCCCC----SCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTCHHH
T ss_pred             cCCCCEEEECCCCCCC----CccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccCCCCcchh
Confidence            9999999999997543    5667889999999999999999999999999997 4556899999999999998999999


Q ss_pred             hhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccc-cchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCC
Q 021960          183 TASKHAIVGLTKNAACELGRYGIRVNCISPFGVATS-MLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLK  261 (305)
Q Consensus       183 ~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (305)
                      +++|++++.++++++.+++++||++++|+||++.|+ +.....+.                 ......   +..  ..+.
T Consensus       178 ~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~-----------------~~~~~~---~~~--~~p~  235 (302)
T 1w6u_A          178 ASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPT-----------------GTFEKE---MIG--RIPC  235 (302)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTT-----------------SHHHHH---HHT--TCTT
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhcccc-----------------hhhHHH---HHh--cCCc
Confidence            999999999999999999999999999999999998 43221100                 011111   111  2466


Q ss_pred             CCCCCHHHHHHHHHHhccCCCCceeccEEEecCCcccc
Q 021960          262 GTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTS  299 (305)
Q Consensus       262 ~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~  299 (305)
                      +++.+|+|+|+.++||+++...+++|++|.+|||...+
T Consensus       236 ~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~  273 (302)
T 1w6u_A          236 GRLGTVEELANLAAFLCSDYASWINGAVIKFDGGEEVL  273 (302)
T ss_dssp             SSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTHHHH
T ss_pred             CCCCCHHHHHHHHHHHcCCcccccCCCEEEECCCeeec
Confidence            78899999999999999988889999999999997653

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=7.3e-41  Score=291.14  Aligned_cols=236  Identities=23%  Similarity=0.366  Sum_probs=194.7

Q ss_pred             CCCCCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHH
Q 021960           23 PPSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVS  102 (305)
Q Consensus        23 ~~~~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~  102 (305)
                      ++....+++|++|||||++|||+++++.|+++|++|++++|+....+    .+ + ++.++ +|+  .++++++++++  
T Consensus        11 ~~~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~----~~-~-~~~~~-~D~--~~~~~~~~~~~--   79 (249)
T 1o5i_A           11 HHMELGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLK----RS-G-HRYVV-CDL--RKDLDLLFEKV--   79 (249)
T ss_dssp             -----CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH----HT-C-SEEEE-CCT--TTCHHHHHHHS--
T ss_pred             hhHHhccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHH----hh-C-CeEEE-eeH--HHHHHHHHHHh--
Confidence            34456789999999999999999999999999999999999863222    12 2 46677 999  45666666654  


Q ss_pred             hcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccc
Q 021960          103 RYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAY  182 (305)
Q Consensus       103 ~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y  182 (305)
                        .++|+||||||....    .++.+.+.++|++.+++|+.+++++++.+++.|.+++.++||++||..+..+.++...|
T Consensus        80 --~~iD~lv~~Ag~~~~----~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  153 (249)
T 1o5i_A           80 --KEVDILVLNAGGPKA----GFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTS  153 (249)
T ss_dssp             --CCCSEEEECCCCCCC----BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHH
T ss_pred             --cCCCEEEECCCCCCC----CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcCCCCCCchH
Confidence              379999999997543    56778899999999999999999999999999988888999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCC
Q 021960          183 TASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKG  262 (305)
Q Consensus       183 ~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (305)
                      +++|+++++|+++++.|++++||+||+|+||+++|++..... .                  +..+.  .+..  ..+.+
T Consensus       154 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-~------------------~~~~~--~~~~--~~p~~  210 (249)
T 1o5i_A          154 NSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELL-S------------------EEKKK--QVES--QIPMR  210 (249)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHS-C------------------HHHHH--HHHT--TSTTS
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCcccccc-h------------------hhHHH--HHHh--cCCCC
Confidence            999999999999999999999999999999999999854321 0                  11110  1111  25668


Q ss_pred             CCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          263 TTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       263 ~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      ++.+|+|+|+.++||+++..++++|++|.+|||++.
T Consensus       211 ~~~~~~dvA~~i~~l~s~~~~~~tG~~~~vdgG~~~  246 (249)
T 1o5i_A          211 RMAKPEEIASVVAFLCSEKASYLTGQTIVVDGGLSK  246 (249)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTCCC
T ss_pred             CCcCHHHHHHHHHHHcCccccCCCCCEEEECCCccc
Confidence            889999999999999999889999999999999764

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=100.00  E-value=3.9e-40  Score=285.02  Aligned_cols=240  Identities=29%  Similarity=0.375  Sum_probs=203.0

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCC
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGR  106 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~  106 (305)
                      .++++|++|||||+||||++++++|+++|++|++++|+....+...+...  .+.++.+|++|.++++++++    .+++
T Consensus         3 ~~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~----~~~~   76 (244)
T 1cyd_A            3 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECP--GIEPVCVDLGDWDATEKALG----GIGP   76 (244)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST--TCEEEECCTTCHHHHHHHHT----TCCC
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcc--CCCcEEecCCCHHHHHHHHH----HcCC
Confidence            45789999999999999999999999999999999998766554444332  35677999999999988876    5678


Q ss_pred             ccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-CCEEEEecccccccCCCCCccchhh
Q 021960          107 LDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRG-GGCIISTASVAGVMGGLGPHAYTAS  185 (305)
Q Consensus       107 id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~~s  185 (305)
                      +|+||||||....    .++.+.+.+++++.+++|+.+++++++.+.+.|.+++ .++||++||..+..+.++...|+++
T Consensus        77 id~vi~~Ag~~~~----~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~s  152 (244)
T 1cyd_A           77 VDLLVNNAALVIM----QPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSST  152 (244)
T ss_dssp             CSEEEECCCCCCC----BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred             CCEEEECCcccCC----CCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCCCCcchhHHH
Confidence            9999999997643    5677889999999999999999999999999998776 7899999999999998899999999


Q ss_pred             HHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCC
Q 021960          186 KHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL  265 (305)
Q Consensus       186 Kaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (305)
                      |++++.+++.++.|++.+||++++|+||++.|++....+..                 ....+.+.   .  ..+.+++.
T Consensus       153 K~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~-----------------~~~~~~~~---~--~~~~~~~~  210 (244)
T 1cyd_A          153 KGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSAD-----------------PEFARKLK---E--RHPLRKFA  210 (244)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCC-----------------HHHHHHHH---H--HSTTSSCB
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEecCcccCccccccccC-----------------HHHHHHHH---h--cCCccCCC
Confidence            99999999999999999999999999999999985432111                 11112221   1  14567889


Q ss_pred             CHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          266 RSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       266 ~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      +++|+|+.++++++++..+++|+++.+|||+..
T Consensus       211 ~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~~~  243 (244)
T 1cyd_A          211 EVEDVVNSILFLLSDRSASTSGGGILVDAGYLA  243 (244)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSSEEEESTTGGG
T ss_pred             CHHHHHHHHHHHhCchhhcccCCEEEECCCccC
Confidence            999999999999999888999999999999864

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=100.00  E-value=5.3e-41  Score=301.75  Aligned_cols=254  Identities=21%  Similarity=0.231  Sum_probs=197.1

Q ss_pred             CCCCCCCEEEEecC--CCchHHHHHHHHHHcCCeEEEEecCc-----------chhhhHhhhcCCC---CeEEEEecC--
Q 021960           26 HRRLEGKVAIITGG--ARGIGEAAVRLFARHGAKVVIADVED-----------TLGSVLASTLAPA---PVTFVHCDV--   87 (305)
Q Consensus        26 ~~~l~~k~vlVtGa--s~giG~~ia~~l~~~g~~vv~~~r~~-----------~~~~~~~~~~~~~---~v~~~~~D~--   87 (305)
                      .++|++|++|||||  ++|||+++|+.|+++|++|++++|+.           ...+...+...+.   .+.++.+|+  
T Consensus         4 ~~~l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~   83 (315)
T 2o2s_A            4 PIDLRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAGVYPLDAAF   83 (315)
T ss_dssp             CCCCTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHHHBCTTSCBCCCSCEEECCTTC
T ss_pred             cccCCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhhhhhhccccccccccccccccc
Confidence            34578999999999  89999999999999999999998653           1112121111111   123444443  


Q ss_pred             ----------C--------CHHHHHHHHHHHHHhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHH
Q 021960           88 ----------S--------LEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGI  149 (305)
Q Consensus        88 ----------~--------d~~~i~~~~~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~  149 (305)
                                +        |.++++++++++.+.+|++|+||||||....  ...++.+.+.++|++.+++|+.++++++
T Consensus        84 ~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~--~~~~~~~~~~~~~~~~~~~N~~g~~~l~  161 (315)
T 2o2s_A           84 DKPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPE--VTKPLLETSRKGYLAASSNSAYSFVSLL  161 (315)
T ss_dssp             SSTTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTT--TTSCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred             cccchhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCc--CCCCcccCCHHHHHHHHhhhhHHHHHHH
Confidence                      3        2568999999999999999999999997531  1256778899999999999999999999


Q ss_pred             HHHHHHHHcCCCCEEEEecccccccCCCCC-ccchhhHHHHHHHHHHHHHHHCc-CCcEEEEEeCCccccccchhcccCC
Q 021960          150 KHAARVMINRGGGCIISTASVAGVMGGLGP-HAYTASKHAIVGLTKNAACELGR-YGIRVNCISPFGVATSMLVNAWRNS  227 (305)
Q Consensus       150 ~~~~~~~~~~~~~~iv~isS~~~~~~~~~~-~~Y~~sKaa~~~~~~~la~e~~~-~~i~v~~v~PG~v~T~~~~~~~~~~  227 (305)
                      +.++|.|.+  .|+||++||.++..+.++. ..|++||+++++|+++++.|+++ +||+||+|+||+++|+|....... 
T Consensus       162 ~~~~~~m~~--~g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~~~~~-  238 (315)
T 2o2s_A          162 QHFGPIMNE--GGSAVTLSYLAAERVVPGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAASAIGKS-  238 (315)
T ss_dssp             HHHSTTEEE--EEEEEEEEEGGGTSCCTTCCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCCHHHHHTTCS-
T ss_pred             HHHHHHHhc--CCEEEEEecccccccCCCccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccccchhhhhcccc-
Confidence            999999855  3899999999999888887 58999999999999999999985 899999999999999986442110 


Q ss_pred             CCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCcccc
Q 021960          228 GDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTS  299 (305)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~  299 (305)
                      . .             ++........... ..|.+++.+|+|+|+.++||+++.++++||++|.+|||++..
T Consensus       239 ~-~-------------~~~~~~~~~~~~~-~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~~  295 (315)
T 2o2s_A          239 G-E-------------KSFIDYAIDYSYN-NAPLRRDLHSDDVGGAALFLLSPLARAVSGVTLYVDNGLHAM  295 (315)
T ss_dssp             S-S-------------SCHHHHHHHHHHH-HSSSCCCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGGC
T ss_pred             c-c-------------chhHHHHHHHHhc-cCCCCCCCCHHHHHHHHHHHhCchhccCcCCEEEECCCeeee
Confidence            0 0             0000111111111 257789999999999999999999999999999999998764

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=100.00  E-value=4.2e-41  Score=294.36  Aligned_cols=247  Identities=24%  Similarity=0.281  Sum_probs=193.9

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHh-c
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSR-Y  104 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~-~  104 (305)
                      +|++|++|||||++|||+++++.|+++|++|++++|+....+...+.+  .+.++.++.+|++|.++++++++++.+. +
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   81 (260)
T 2qq5_A            2 PMNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQ   81 (260)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            467999999999999999999999999999999999876554443332  1346889999999999999999999886 8


Q ss_pred             CCccEEEEcCCCCCCC---CCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCcc
Q 021960          105 GRLDILYNNAGVLGNQ---RKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHA  181 (305)
Q Consensus       105 g~id~li~nag~~~~~---~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~  181 (305)
                      +++|+||||||.....   ....++.+.+.++|++.+++|+.+++++++.+++.|.+++.++||++||..+..+. +...
T Consensus        82 g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-~~~~  160 (260)
T 2qq5_A           82 GRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQYM-FNVP  160 (260)
T ss_dssp             TCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGGTSCC-SSHH
T ss_pred             CCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhhcCCC-CCCc
Confidence            9999999999531100   01145667788999999999999999999999999988888999999999988754 4678


Q ss_pred             chhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCC
Q 021960          182 YTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLK  261 (305)
Q Consensus       182 Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (305)
                      |+++|+++++|+++++.|++++||+||+|+||+++|+|.........    .           .. ..   .......+.
T Consensus       161 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~----~-----------~~-~~---~~~~~~~~~  221 (260)
T 2qq5_A          161 YGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEHMAKEE----V-----------LQ-DP---VLKQFKSAF  221 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC-----------------------------------------
T ss_pred             hHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHHHHhhcccc----c-----------cc-hh---HHHHHHhhh
Confidence            99999999999999999999999999999999999998643221100    0           00 00   000001233


Q ss_pred             CCCCCHHHHHHHHHHhccCCC-CceeccEEEecC
Q 021960          262 GTTLRSKDIAEAALYLASDES-RYVSGHNLVVDG  294 (305)
Q Consensus       262 ~~~~~~~dva~~v~~l~s~~~-~~~tG~~i~idg  294 (305)
                      ++..+|||+|+.++||+++++ .++||++|.+|+
T Consensus       222 ~~~~~pe~va~~v~~l~s~~~~~~itG~~i~~~~  255 (260)
T 2qq5_A          222 SSAETTELSGKCVVALATDPNILSLSGKVLPSCD  255 (260)
T ss_dssp             CHHHHHHHHHHHHHHHHTCTTGGGGTTCEEEHHH
T ss_pred             ccCCCHHHHHHHHHHHhcCcccccccceeechhh
Confidence            455689999999999999986 489999999874

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=3e-40  Score=294.94  Aligned_cols=248  Identities=26%  Similarity=0.368  Sum_probs=206.7

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc-------CCCCeEEEEecCCCHHHHHHHHHH
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL-------APAPVTFVHCDVSLEEDIENLINS   99 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~-------~~~~v~~~~~D~~d~~~i~~~~~~   99 (305)
                      ..+++|++|||||+||||+++++.|+++|++|++++|+....+...+.+       .+.++.++.+|++|.+++++++++
T Consensus        14 ~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   93 (303)
T 1yxm_A           14 GLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKS   93 (303)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHH
Confidence            3678999999999999999999999999999999999876554443332       245789999999999999999999


Q ss_pred             HHHhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCC
Q 021960          100 TVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGP  179 (305)
Q Consensus       100 ~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~  179 (305)
                      +.+.++++|+||||||....    .++.+.+.+++++.+++|+.+++++++.+++.+.+++.++||++||.+ ..+.++.
T Consensus        94 ~~~~~g~id~li~~Ag~~~~----~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~-~~~~~~~  168 (303)
T 1yxm_A           94 TLDTFGKINFLVNNGGGQFL----SPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPT-KAGFPLA  168 (303)
T ss_dssp             HHHHHSCCCEEEECCCCCCC----CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCC-TTCCTTC
T ss_pred             HHHHcCCCCEEEECCCCCCC----CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeec-ccCCCcc
Confidence            99999999999999996533    456778999999999999999999999999976666678999999998 7788889


Q ss_pred             ccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCC
Q 021960          180 HAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGN  259 (305)
Q Consensus       180 ~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (305)
                      ..|+++|+++++++++++.|+.++||++++|+||+++|++........     .          .+   .......  ..
T Consensus       169 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~-----~----------~~---~~~~~~~--~~  228 (303)
T 1yxm_A          169 VHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSW-----G----------QS---FFEGSFQ--KI  228 (303)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGG-----G----------GG---GGTTGGG--GS
T ss_pred             hhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhcccc-----c----------hH---HHHHHHh--cC
Confidence            999999999999999999999999999999999999999532111100     0          00   0000111  24


Q ss_pred             CCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCcccc
Q 021960          260 LKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTS  299 (305)
Q Consensus       260 ~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~  299 (305)
                      +.+++.+|+|+|+.++||+++..++++|++|.+|||....
T Consensus       229 p~~~~~~~~dvA~~i~~l~~~~~~~~~G~~~~v~gG~~~~  268 (303)
T 1yxm_A          229 PAKRIGVPEEVSSVVCFLLSPAASFITGQSVDVDGGRSLY  268 (303)
T ss_dssp             TTSSCBCTHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             cccCCCCHHHHHHHHHHHhCcccccCCCcEEEECCCeecc
Confidence            5678889999999999999998889999999999998664

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=100.00  E-value=1.1e-40  Score=290.48  Aligned_cols=243  Identities=30%  Similarity=0.457  Sum_probs=205.1

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecC-cchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVE-DTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~-~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      ++++|++|||||+||||++++++|+++|++|++++|+ ....+.+.+.+  .+.++.++.+|++|.++++++++++.+.+
T Consensus         4 ~l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (258)
T 3afn_B            4 DLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKF   83 (258)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            5789999999999999999999999999999999998 55544433322  24568999999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC--C---CEEEEeccccccc-CCCC
Q 021960          105 GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRG--G---GCIISTASVAGVM-GGLG  178 (305)
Q Consensus       105 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~---~~iv~isS~~~~~-~~~~  178 (305)
                      +++|+||||||....   ..++.+.+.+++++.+++|+.+++++++.+++.|.+++  .   ++||++||..+.. +.++
T Consensus        84 g~id~vi~~Ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~  160 (258)
T 3afn_B           84 GGIDVLINNAGGLVG---RKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGPG  160 (258)
T ss_dssp             SSCSEEEECCCCCCC---CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHCCCTT
T ss_pred             CCCCEEEECCCCcCC---cCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccCCCCC
Confidence            999999999997322   15677889999999999999999999999999987554  3   8999999999887 7888


Q ss_pred             CccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcC
Q 021960          179 PHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLG  258 (305)
Q Consensus       179 ~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (305)
                      ...|+++|++++.+++.++.|++++||++++|+||+++|++....                   ..+..+.+   ..  .
T Consensus       161 ~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~-------------------~~~~~~~~---~~--~  216 (258)
T 3afn_B          161 AGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADK-------------------TQDVRDRI---SN--G  216 (258)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTC-------------------CHHHHHHH---HT--T
T ss_pred             chHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCccccccccc-------------------CHHHHHHH---hc--c
Confidence            999999999999999999999999999999999999999985321                   01111111   11  2


Q ss_pred             CCCCCCCCHHHHHHHHHHhccCCCC-ceeccEEEecCCcc
Q 021960          259 NLKGTTLRSKDIAEAALYLASDESR-YVSGHNLVVDGGVT  297 (305)
Q Consensus       259 ~~~~~~~~~~dva~~v~~l~s~~~~-~~tG~~i~idgG~~  297 (305)
                      .+.+++.+++|+|+.+++++++... +++|++|.+|||.+
T Consensus       217 ~~~~~~~~~~dva~~~~~l~~~~~~~~~~G~~~~v~gg~~  256 (258)
T 3afn_B          217 IPMGRFGTAEEMAPAFLFFASHLASGYITGQVLDINGGQY  256 (258)
T ss_dssp             CTTCSCBCGGGTHHHHHHHHCHHHHTTCCSEEEEESTTSS
T ss_pred             CCCCcCCCHHHHHHHHHHHhCcchhccccCCEEeECCCcc
Confidence            4667889999999999999998766 89999999999974

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=100.00  E-value=6e-41  Score=291.97  Aligned_cols=227  Identities=19%  Similarity=0.192  Sum_probs=195.9

Q ss_pred             CCCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           25 SHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        25 ~~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      ...+..+|++|||||++|||+++|+.|+++|++|++++|+.....          -..+.+|++|.++++++++++.+.+
T Consensus        16 ~~~~~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~----------~~~~~~d~~d~~~v~~~~~~~~~~~   85 (251)
T 3orf_A           16 PRGSHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNA----------DHSFTIKDSGEEEIKSVIEKINSKS   85 (251)
T ss_dssp             ------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTS----------SEEEECSCSSHHHHHHHHHHHHTTT
T ss_pred             ccccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc----------ccceEEEeCCHHHHHHHHHHHHHHc
Confidence            334455899999999999999999999999999999999875432          2357899999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchh
Q 021960          105 GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTA  184 (305)
Q Consensus       105 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~  184 (305)
                      +++|+||||||.....   ..+.+.+.+++++.+++|+.+++++++.+++.|.+  .|+||++||..+..+.++...|++
T Consensus        86 g~iD~li~~Ag~~~~~---~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~~  160 (251)
T 3orf_A           86 IKVDTFVCAAGGWSGG---NASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQ--GGLFVLTGASAALNRTSGMIAYGA  160 (251)
T ss_dssp             CCEEEEEECCCCCCCB---CTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCCTTBHHHHH
T ss_pred             CCCCEEEECCccCCCC---CcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhcc--CCEEEEEechhhccCCCCCchhHH
Confidence            9999999999986542   23567788999999999999999999999999855  589999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHC--cCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCC
Q 021960          185 SKHAIVGLTKNAACELG--RYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKG  262 (305)
Q Consensus       185 sKaa~~~~~~~la~e~~--~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (305)
                      +|+++++|+++++.|++  ++||+|++|+||+++|+|.......                                .+.+
T Consensus       161 sKaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~~~~~~~~--------------------------------~~~~  208 (251)
T 3orf_A          161 TKAATHHIIKDLASENGGLPAGSTSLGILPVTLDTPTNRKYMSD--------------------------------ANFD  208 (251)
T ss_dssp             HHHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHHHHHHCTT--------------------------------SCGG
T ss_pred             HHHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcchhhhccc--------------------------------cccc
Confidence            99999999999999987  8899999999999999986543322                                2446


Q ss_pred             CCCCHHHHHHHHHHhccC-CCCceeccEEEecCCccc
Q 021960          263 TTLRSKDIAEAALYLASD-ESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       263 ~~~~~~dva~~v~~l~s~-~~~~~tG~~i~idgG~~~  298 (305)
                      ++.+|+|+|+.++||+++ ..++++|++|.+++|...
T Consensus       209 ~~~~~~dva~~i~~l~~~~~~~~~tG~~i~v~~g~~~  245 (251)
T 3orf_A          209 DWTPLSEVAEKLFEWSTNSDSRPTNGSLVKFETKSKV  245 (251)
T ss_dssp             GSBCHHHHHHHHHHHHHCGGGCCCTTCEEEEEEETTE
T ss_pred             ccCCHHHHHHHHHHHhcCccccCCcceEEEEecCCcc
Confidence            678999999999999999 888999999999988654

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=100.00  E-value=1.8e-40  Score=285.19  Aligned_cols=224  Identities=17%  Similarity=0.210  Sum_probs=185.0

Q ss_pred             CEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEEE
Q 021960           32 KVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILY  111 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~li  111 (305)
                      |++|||||++|||+++++.|+++|++|++++|+....+...+.+ +.++.++.+|++|.++++++++++.+.   +|+||
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~---~d~lv   77 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCL-SNNVGYRARDLASHQEVEQLFEQLDSI---PSTVV   77 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTC-SSCCCEEECCTTCHHHHHHHHHSCSSC---CSEEE
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH-hhccCeEeecCCCHHHHHHHHHHHhhc---CCEEE
Confidence            68999999999999999999999999999999987777666555 456889999999999999998876433   49999


Q ss_pred             EcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhHHHHHH
Q 021960          112 NNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVG  191 (305)
Q Consensus       112 ~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKaa~~~  191 (305)
                      ||||....    .++.+.+.++|++.+++|+.+++++++.+++.|.+++. +||++||..+..+.++...|+++|+++++
T Consensus        78 ~~Ag~~~~----~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~-~iv~isS~~~~~~~~~~~~Y~asKaa~~~  152 (230)
T 3guy_A           78 HSAGSGYF----GLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPV-NVVMIMSTAAQQPKAQESTYCAVKWAVKG  152 (230)
T ss_dssp             ECCCCCCC----SCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCC-EEEEECCGGGTSCCTTCHHHHHHHHHHHH
T ss_pred             EeCCcCCC----CccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-eEEEEeecccCCCCCCCchhHHHHHHHHH
Confidence            99997643    67788999999999999999999999999999977654 99999999999999999999999999999


Q ss_pred             HHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCCHHHHH
Q 021960          192 LTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSKDIA  271 (305)
Q Consensus       192 ~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva  271 (305)
                      |+++++.|++++||+||+|+||+++|+|......                                ..+.+++.+|+|+|
T Consensus       153 ~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~--------------------------------~~~~~~~~~~~dvA  200 (230)
T 3guy_A          153 LIESVRLELKGKPMKIIAVYPGGMATEFWETSGK--------------------------------SLDTSSFMSAEDAA  200 (230)
T ss_dssp             HHHHHHHHTTTSSCEEEEEEECCC------------------------------------------------CCCHHHHH
T ss_pred             HHHHHHHHHHhcCeEEEEEECCcccChHHHhcCC--------------------------------CCCcccCCCHHHHH
Confidence            9999999999999999999999999998543211                                12346788999999


Q ss_pred             HHHHHhcc-CCCCceeccEEEecCCc
Q 021960          272 EAALYLAS-DESRYVSGHNLVVDGGV  296 (305)
Q Consensus       272 ~~v~~l~s-~~~~~~tG~~i~idgG~  296 (305)
                      +.++|+++ +...++||+.+..|...
T Consensus       201 ~~i~~l~~~~~~~~itg~~~~~~~~~  226 (230)
T 3guy_A          201 LMIHGALANIGNGYVSDITVNREGHH  226 (230)
T ss_dssp             HHHHHHCCEETTEEEEEEEEEC----
T ss_pred             HHHHHHHhCcCCCCccceeecCCCCC
Confidence            99999987 67889999999988764

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=100.00  E-value=4.8e-40  Score=284.50  Aligned_cols=239  Identities=28%  Similarity=0.461  Sum_probs=203.4

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHcCCeEEEE-ecCcchhhhHhhhc--CCCCeEE-EEecCCCHHHHHHHHHHHHHhcCC
Q 021960           31 GKVAIITGGARGIGEAAVRLFARHGAKVVIA-DVEDTLGSVLASTL--APAPVTF-VHCDVSLEEDIENLINSTVSRYGR  106 (305)
Q Consensus        31 ~k~vlVtGas~giG~~ia~~l~~~g~~vv~~-~r~~~~~~~~~~~~--~~~~v~~-~~~D~~d~~~i~~~~~~~~~~~g~  106 (305)
                      +|++|||||+||||++++++|+++|++|+++ +|+....+...+.+  .+.++.. +.+|++|.++++++++++.+.+++
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGG   80 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcCC
Confidence            4789999999999999999999999999998 78765544433322  2344666 899999999999999999999999


Q ss_pred             ccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhH
Q 021960          107 LDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASK  186 (305)
Q Consensus       107 id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  186 (305)
                      +|+||||||....    .++.+.+.+++++.+++|+.+++++++.+++.|.+++.++||++||..+..+.++...|+++|
T Consensus        81 ~d~li~~Ag~~~~----~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK  156 (245)
T 2ph3_A           81 LDTLVNNAGITRD----TLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGILGNPGQANYVASK  156 (245)
T ss_dssp             CCEEEECCCCCCC----BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCSSBHHHHHHH
T ss_pred             CCEEEECCCCCCC----CCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhccCCCCCcchHHHH
Confidence            9999999997643    467788999999999999999999999999999888889999999999998888999999999


Q ss_pred             HHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCC
Q 021960          187 HAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLR  266 (305)
Q Consensus       187 aa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (305)
                      ++++.++++++.|+.++||++++|+||+++|++....                  + .+..+.+   ..  ..+.+++.+
T Consensus       157 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~------------------~-~~~~~~~---~~--~~~~~~~~~  212 (245)
T 2ph3_A          157 AGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTERL------------------P-QEVKEAY---LK--QIPAGRFGR  212 (245)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS------------------C-HHHHHHH---HH--TCTTCSCBC
T ss_pred             HHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcchhhc------------------C-HHHHHHH---Hh--cCCCCCCcC
Confidence            9999999999999999999999999999999985421                  0 1111111   11  245678889


Q ss_pred             HHHHHHHHHHhccCCCCceeccEEEecCCcc
Q 021960          267 SKDIAEAALYLASDESRYVSGHNLVVDGGVT  297 (305)
Q Consensus       267 ~~dva~~v~~l~s~~~~~~tG~~i~idgG~~  297 (305)
                      ++|+|+.+++++++..++++|+++.+|||..
T Consensus       213 ~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~  243 (245)
T 2ph3_A          213 PEEVAEAVAFLVSEKAGYITGQTLCVDGGLT  243 (245)
T ss_dssp             HHHHHHHHHHHTSGGGTTCCSCEEEESTTCS
T ss_pred             HHHHHHHHHHHhCcccccccCCEEEECCCCC
Confidence            9999999999999888899999999999974

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=100.00  E-value=6e-41  Score=290.17  Aligned_cols=224  Identities=16%  Similarity=0.131  Sum_probs=194.5

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhc--CC
Q 021960           29 LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRY--GR  106 (305)
Q Consensus        29 l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~--g~  106 (305)
                      .++|++|||||++|||+++++.|+++|++|++++|+.....        ....++.+|++|.++++++++++.+.+  ++
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~--------~~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~   76 (241)
T 1dhr_A            5 GEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA--------SASVIVKMTDSFTEQADQVTAEVGKLLGDQK   76 (241)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS--------SEEEECCCCSCHHHHHHHHHHHHHHHHTTCC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc--------CCcEEEEcCCCCHHHHHHHHHHHHHHhCCCC
Confidence            46899999999999999999999999999999999865432        125678999999999999999999998  79


Q ss_pred             ccEEEEcCCCCCCCCCCCcc-cCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhh
Q 021960          107 LDILYNNAGVLGNQRKHKSI-IDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTAS  185 (305)
Q Consensus       107 id~li~nag~~~~~~~~~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  185 (305)
                      +|+||||||....    .++ .+.+.++|++.+++|+.+++++++.+++.|.+  .++||++||..+..+.++...|+++
T Consensus        77 iD~lv~~Ag~~~~----~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~as  150 (241)
T 1dhr_A           77 VDAILCVAGGWAG----GNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE--GGLLTLAGAKAALDGTPGMIGYGMA  150 (241)
T ss_dssp             EEEEEECCCCCCC----BCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCCTTBHHHHHH
T ss_pred             CCEEEEcccccCC----CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhcc--CCEEEEECCHHHccCCCCchHHHHH
Confidence            9999999997643    445 66788999999999999999999999999854  4899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHC--cCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCC
Q 021960          186 KHAIVGLTKNAACELG--RYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGT  263 (305)
Q Consensus       186 Kaa~~~~~~~la~e~~--~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (305)
                      |+++++|+++++.|++  ++||+||+|+||+++|+|.......                                ....+
T Consensus       151 K~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~~~~~~~~--------------------------------~~~~~  198 (241)
T 1dhr_A          151 KGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMPE--------------------------------ADFSS  198 (241)
T ss_dssp             HHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHSTT--------------------------------SCGGG
T ss_pred             HHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCccccccCcc--------------------------------hhhcc
Confidence            9999999999999998  8999999999999999985433211                                00123


Q ss_pred             CCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          264 TLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       264 ~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      ..+++|+|+.++|++++..++++|+++.+|||...
T Consensus       199 ~~~~~~vA~~v~~l~~~~~~~~~G~~~~v~g~~~~  233 (241)
T 1dhr_A          199 WTPLEFLVETFHDWITGNKRPNSGSLIQVVTTDGK  233 (241)
T ss_dssp             SEEHHHHHHHHHHHHTTTTCCCTTCEEEEEEETTE
T ss_pred             CCCHHHHHHHHHHHhcCCCcCccceEEEEeCCCCc
Confidence            35789999999999999999999999999998753

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=100.00  E-value=1.1e-39  Score=282.23  Aligned_cols=231  Identities=24%  Similarity=0.278  Sum_probs=204.0

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHcCC-------eEEEEecCcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHH
Q 021960           31 GKVAIITGGARGIGEAAVRLFARHGA-------KVVIADVEDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTV  101 (305)
Q Consensus        31 ~k~vlVtGas~giG~~ia~~l~~~g~-------~vv~~~r~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~  101 (305)
                      +|++|||||+||||+++++.|+++|+       +|++++|+....+.+.+.+  .+.++.++.+|++|.++++++++++.
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   81 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIV   81 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHHH
Confidence            68999999999999999999999999       8999999876555444333  24568899999999999999999999


Q ss_pred             HhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCcc
Q 021960          102 SRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHA  181 (305)
Q Consensus       102 ~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~  181 (305)
                      +.++++|+||||||....    .++.+.+.+++++.+++|+.+++++++.+++.|.+++.++||++||..+..+.++...
T Consensus        82 ~~~g~id~li~~Ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~  157 (244)
T 2bd0_A           82 ERYGHIDCLVNNAGVGRF----GALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSI  157 (244)
T ss_dssp             HHTSCCSEEEECCCCCCC----CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHH
T ss_pred             HhCCCCCEEEEcCCcCCc----CccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcCCCCCCch
Confidence            999999999999998643    5677889999999999999999999999999998888899999999999999999999


Q ss_pred             chhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCC
Q 021960          182 YTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLK  261 (305)
Q Consensus       182 Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (305)
                      |+++|+++++|+++++.|++++||++++|+||+++|++..... .                 +.               .
T Consensus       158 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-~-----------------~~---------------~  204 (244)
T 2bd0_A          158 YCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVD-D-----------------EM---------------Q  204 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCC-S-----------------TT---------------G
T ss_pred             hHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhcc-c-----------------cc---------------c
Confidence            9999999999999999999999999999999999999853310 0                 00               0


Q ss_pred             CCCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          262 GTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       262 ~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      .++.+|+|+|+.+++++++...+++|+++..|+|..+
T Consensus       205 ~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~~~~~  241 (244)
T 2bd0_A          205 ALMMMPEDIAAPVVQAYLQPSRTVVEEIILRPTSGDI  241 (244)
T ss_dssp             GGSBCHHHHHHHHHHHHTSCTTEEEEEEEEEETTCCC
T ss_pred             ccCCCHHHHHHHHHHHHhCCccccchheEEecccccc
Confidence            1467899999999999999999999999999999776

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=2.1e-40  Score=321.00  Aligned_cols=229  Identities=31%  Similarity=0.515  Sum_probs=192.6

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      .+++||++|||||++|||+++|+.|+++|++|++.+++..  +...+++  .+.++..+.+|++  ++.+++++++.+.+
T Consensus       318 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~--~~~~~~i~~~g~~~~~~~~Dv~--~~~~~~~~~~~~~~  393 (604)
T 2et6_A          318 VSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDA--TKTVDEIKAAGGEAWPDQHDVA--KDSEAIIKNVIDKY  393 (604)
T ss_dssp             CCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC--HHHHHHHHHTTCEEEEECCCHH--HHHHHHHHHHHHHH
T ss_pred             cccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCccH--HHHHHHHHhcCCeEEEEEcChH--HHHHHHHHHHHHhc
Confidence            3678999999999999999999999999999999986432  1111111  2345666777773  55678889999999


Q ss_pred             CCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchh
Q 021960          105 GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTA  184 (305)
Q Consensus       105 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~  184 (305)
                      |+||+||||||....    .++.+++.++|++.+++|+.++++++++++|+|++++.|+||++||.++..+.++...|++
T Consensus       394 G~iDiLVnNAGi~~~----~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~~~~~~~~Y~a  469 (604)
T 2et6_A          394 GTIDILVNNAGILRD----RSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGNFGQANYSS  469 (604)
T ss_dssp             SCCCEEEECCCCCCC----BCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTTBHHHHH
T ss_pred             CCCCEEEECCCCCCC----CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCCCChhHHH
Confidence            999999999998643    5678899999999999999999999999999999888899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCC
Q 021960          185 SKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT  264 (305)
Q Consensus       185 sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (305)
                      ||+|+.+|+++|+.|++++||+||+|+||. +|+|....+..                                 .....
T Consensus       470 sKaal~~lt~~la~El~~~gIrVn~v~PG~-~T~m~~~~~~~---------------------------------~~~~~  515 (604)
T 2et6_A          470 SKAGILGLSKTMAIEGAKNNIKVNIVAPHA-ETAMTLSIMRE---------------------------------QDKNL  515 (604)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECC-CCCC------------------------------------------CCS
T ss_pred             HHHHHHHHHHHHHHHhCccCeEEEEEcCCC-CCccccccCch---------------------------------hhccC
Confidence            999999999999999999999999999995 99985322110                                 01234


Q ss_pred             CCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          265 LRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       265 ~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      ++|+|+|+.++||+|+.+. +||++|.+|||+..
T Consensus       516 ~~pe~vA~~v~~L~s~~~~-itG~~~~vdGG~~~  548 (604)
T 2et6_A          516 YHADQVAPLLVYLGTDDVP-VTGETFEIGGGWIG  548 (604)
T ss_dssp             SCGGGTHHHHHHTTSTTCC-CCSCEEEEETTEEE
T ss_pred             CCHHHHHHHHHHHhCCccC-CCCcEEEECCCeeE
Confidence            5899999999999999988 99999999999765

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=100.00  E-value=3.7e-40  Score=293.83  Aligned_cols=248  Identities=21%  Similarity=0.211  Sum_probs=195.6

Q ss_pred             CCCCCCCEEEEecCC--CchHHHHHHHHHHcCCeEEEEecCc-----------chhhhHhhhcCCC----CeEEEEec--
Q 021960           26 HRRLEGKVAIITGGA--RGIGEAAVRLFARHGAKVVIADVED-----------TLGSVLASTLAPA----PVTFVHCD--   86 (305)
Q Consensus        26 ~~~l~~k~vlVtGas--~giG~~ia~~l~~~g~~vv~~~r~~-----------~~~~~~~~~~~~~----~v~~~~~D--   86 (305)
                      .+++++|++|||||+  +|||+++|+.|+++|++|++++|+.           ...+... .+...    ....+.+|  
T Consensus         3 ~~~l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~   81 (297)
T 1d7o_A            3 PIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSR-VLPDGSLMEIKKVYPLDAV   81 (297)
T ss_dssp             CCCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGG-BCTTSSBCCEEEEEEECTT
T ss_pred             ccccCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhhh-hhcccccccccccccccee
Confidence            346789999999999  9999999999999999999998642           1111111 11111    12334443  


Q ss_pred             ------CC----C--------HHHHHHHHHHHHHhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHH
Q 021960           87 ------VS----L--------EEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALG  148 (305)
Q Consensus        87 ------~~----d--------~~~i~~~~~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l  148 (305)
                            ++    |        .++++++++++.+.++++|+||||||....  ...++.+.+.++|++.+++|+.+++++
T Consensus        82 ~~~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~~~vN~~g~~~l  159 (297)
T 1d7o_A           82 FDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPE--VSKPLLETSRKGYLAAISASSYSFVSL  159 (297)
T ss_dssp             CCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTT--TTSCGGGCCHHHHHHHHHHHTHHHHHH
T ss_pred             ccchhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCcc--CCCCcccCCHHHHHHHHHHhhhHHHHH
Confidence                  32    2        568999999999999999999999996431  125677889999999999999999999


Q ss_pred             HHHHHHHHHcCCCCEEEEecccccccCCCCC-ccchhhHHHHHHHHHHHHHHHCc-CCcEEEEEeCCccccccchhcccC
Q 021960          149 IKHAARVMINRGGGCIISTASVAGVMGGLGP-HAYTASKHAIVGLTKNAACELGR-YGIRVNCISPFGVATSMLVNAWRN  226 (305)
Q Consensus       149 ~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~-~~Y~~sKaa~~~~~~~la~e~~~-~~i~v~~v~PG~v~T~~~~~~~~~  226 (305)
                      ++.++|.|.+  .|+||++||.++..+.++. ..|+++|+++++|+++++.|+++ +||+||+|+||+++|+|...... 
T Consensus       160 ~~~~~~~m~~--~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~~~~~~~-  236 (297)
T 1d7o_A          160 LSHFLPIMNP--GGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGF-  236 (297)
T ss_dssp             HHHHGGGEEE--EEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSH-
T ss_pred             HHHHHHHhcc--CceEEEEeccccccCCCCcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccchhhhccc-
Confidence            9999999855  4899999999999988887 69999999999999999999985 89999999999999998532100 


Q ss_pred             CCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCccccc
Q 021960          227 SGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTSR  300 (305)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~~  300 (305)
                                      .++..+.+   ..  ..+.+++.+|+|+|+.++||+++.++++||++|.+|||++...
T Consensus       237 ----------------~~~~~~~~---~~--~~p~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdgG~~~~~  289 (297)
T 1d7o_A          237 ----------------IDTMIEYS---YN--NAPIQKTLTADEVGNAAAFLVSPLASAITGATIYVDNGLNSMG  289 (297)
T ss_dssp             ----------------HHHHHHHH---HH--HSSSCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGGCS
T ss_pred             ----------------cHHHHHHh---hc--cCCCCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCceeec
Confidence                            01111111   11  1467888999999999999999999999999999999987643

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=8.4e-41  Score=323.80  Aligned_cols=230  Identities=28%  Similarity=0.452  Sum_probs=194.5

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCc---------chhhhHhhhc--CCCCeEEEEecCCCHHHHHHH
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVED---------TLGSVLASTL--APAPVTFVHCDVSLEEDIENL   96 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~---------~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~   96 (305)
                      ++++|++|||||++|||+++|+.|+++|++|++.+|+.         ...+...+++  .+.+   ..+|++|.++++++
T Consensus         5 ~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~---~~~d~~d~~~~~~~   81 (604)
T 2et6_A            5 DFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGV---AVADYNNVLDGDKI   81 (604)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCE---EEEECCCTTCHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCe---EEEEcCCHHHHHHH
Confidence            57899999999999999999999999999999988754         3333332222  1222   23688888889999


Q ss_pred             HHHHHHhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCC
Q 021960           97 INSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGG  176 (305)
Q Consensus        97 ~~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~  176 (305)
                      ++++.+.+|+||+||||||+...    .++.+.+.++|++.+++|+.++++++|+++|+|++++.|+||++||.++..+.
T Consensus        82 v~~~~~~~G~iDiLVnNAGi~~~----~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~~~~  157 (604)
T 2et6_A           82 VETAVKNFGTVHVIINNAGILRD----ASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGN  157 (604)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCC----BCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC
T ss_pred             HHHHHHHcCCCCEEEECCCCCCC----CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCC
Confidence            99999999999999999998643    56788999999999999999999999999999998888999999999999999


Q ss_pred             CCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhh
Q 021960          177 LGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSG  256 (305)
Q Consensus       177 ~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (305)
                      ++...|++||+|+.+|+++|+.|++++||+||+|+|| ++|+|.....                 + ++    .      
T Consensus       158 ~~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg-~~T~m~~~~~-----------------~-~~----~------  208 (604)
T 2et6_A          158 FGQANYASAKSALLGFAETLAKEGAKYNIKANAIAPL-ARSRMTESIM-----------------P-PP----M------  208 (604)
T ss_dssp             TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-CCCHHHHTTS-----------------C-HH----H------
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC-CcCccccccC-----------------C-hh----h------
Confidence            9999999999999999999999999999999999998 6898743211                 0 00    0      


Q ss_pred             cCCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCcccc
Q 021960          257 LGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTS  299 (305)
Q Consensus       257 ~~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~  299 (305)
                           ....+|||+|..++||+++. .++||++|.+|||+...
T Consensus       209 -----~~~~~pe~vA~~v~~L~s~~-~~itG~~~~vdgG~~~~  245 (604)
T 2et6_A          209 -----LEKLGPEKVAPLVLYLSSAE-NELTGQFFEVAAGFYAQ  245 (604)
T ss_dssp             -----HTTCSHHHHHHHHHHHTSSS-CCCCSCEEEEETTEEEE
T ss_pred             -----hccCCHHHHHHHHHHHhCCc-ccCCCCEEEECCCeEEE
Confidence                 01248999999999999998 99999999999997543

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=1.4e-40  Score=286.91  Aligned_cols=224  Identities=21%  Similarity=0.193  Sum_probs=193.1

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhc--CC
Q 021960           29 LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRY--GR  106 (305)
Q Consensus        29 l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~--g~  106 (305)
                      |++|++|||||++|||+++++.|+++|++|++++|+.....        ....++.+|++|.++++++++++.+.+  ++
T Consensus         1 m~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~--------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~   72 (236)
T 1ooe_A            1 MSSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA--------DSNILVDGNKNWTEQEQSILEQTASSLQGSQ   72 (236)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS--------SEEEECCTTSCHHHHHHHHHHHHHHHHTTCC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc--------cccEEEeCCCCCHHHHHHHHHHHHHHhCCCC
Confidence            46899999999999999999999999999999999865432        125678899999999999999999998  79


Q ss_pred             ccEEEEcCCCCCCCCCCCcc-cCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhh
Q 021960          107 LDILYNNAGVLGNQRKHKSI-IDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTAS  185 (305)
Q Consensus       107 id~li~nag~~~~~~~~~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  185 (305)
                      +|+||||||....    .++ .+.+.++|++.+++|+.+++++++.+++.|.+  .++||++||..+..+.++...|+++
T Consensus        73 id~lv~~Ag~~~~----~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~~s  146 (236)
T 1ooe_A           73 VDGVFCVAGGWAG----GSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP--GGLLQLTGAAAAMGPTPSMIGYGMA  146 (236)
T ss_dssp             EEEEEECCCCCCC----BCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCCTTBHHHHHH
T ss_pred             CCEEEECCcccCC----CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc--CCEEEEECchhhccCCCCcHHHHHH
Confidence            9999999997643    345 56788999999999999999999999999854  4899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHC--cCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCC
Q 021960          186 KHAIVGLTKNAACELG--RYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGT  263 (305)
Q Consensus       186 Kaa~~~~~~~la~e~~--~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (305)
                      |+++++|+++++.|++  ++||+|++|+||+++|+|.......                                ....+
T Consensus       147 K~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~--------------------------------~~~~~  194 (236)
T 1ooe_A          147 KAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWMPN--------------------------------ADHSS  194 (236)
T ss_dssp             HHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHSTT--------------------------------CCGGG
T ss_pred             HHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCcchhhcCCC--------------------------------ccccc
Confidence            9999999999999998  8999999999999999985443211                                01123


Q ss_pred             CCCHHHHHHHHH-HhccCCCCceeccEEEecCCccc
Q 021960          264 TLRSKDIAEAAL-YLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       264 ~~~~~dva~~v~-~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      ..+|+|+|+.++ +|+++..+++||+++.+|||...
T Consensus       195 ~~~~~dvA~~i~~~l~s~~~~~~~G~~~~v~gg~~~  230 (236)
T 1ooe_A          195 WTPLSFISEHLLKWTTETSSRPSSGALLKITTENGT  230 (236)
T ss_dssp             CBCHHHHHHHHHHHHHCGGGCCCTTCEEEEEEETTE
T ss_pred             cCCHHHHHHHHHHHHcCCCcccccccEEEEecCCCc
Confidence            457899999998 66688889999999999999754

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=100.00  E-value=8.7e-40  Score=292.04  Aligned_cols=238  Identities=26%  Similarity=0.421  Sum_probs=193.6

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhcC
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRYG  105 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g  105 (305)
                      ++++|++|||||++|||+++|++|+++|++|++++|+....+...+.+  .+.++.++.+|++|.++++++++++.+.++
T Consensus        28 ~l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  107 (301)
T 3tjr_A           28 GFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLG  107 (301)
T ss_dssp             CSTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCC
Confidence            478999999999999999999999999999999999887766554443  345799999999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-CCEEEEecccccccCCCCCccchh
Q 021960          106 RLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRG-GGCIISTASVAGVMGGLGPHAYTA  184 (305)
Q Consensus       106 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~~  184 (305)
                      ++|+||||||....    .++.+.+.+++++.+++|+.+++++++.++|.|.+++ .++||++||..+..+.++...|++
T Consensus       108 ~id~lvnnAg~~~~----~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  183 (301)
T 3tjr_A          108 GVDVVFSNAGIVVA----GPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAGLGTYGV  183 (301)
T ss_dssp             SCSEEEECCCCCCC----BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCTTBHHHHH
T ss_pred             CCCEEEECCCcCCC----CCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCchHHHH
Confidence            99999999998744    5778899999999999999999999999999998876 789999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCC
Q 021960          185 SKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT  264 (305)
Q Consensus       185 sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (305)
                      ||+++++|+++++.|++++||+|++|+||+++|+|...........        +... ......+.    . .......
T Consensus       184 sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~--------~~~~-~~~~~~~~----~-~~~~~~~  249 (301)
T 3tjr_A          184 AKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKLVSNSERIRGAD--------YGMS-ATPEGAFG----P-LPTQDES  249 (301)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHHHHHHHHC------------------------------------C
T ss_pred             HHHHHHHHHHHHHHHhcccCcEEEEEECCccccccccccccccchh--------hccc-cChhhhcc----c-cccccCC
Confidence            9999999999999999999999999999999999965432110000        0000 00000000    0 1123457


Q ss_pred             CCHHHHHHHHHHhccCCCC
Q 021960          265 LRSKDIAEAALYLASDESR  283 (305)
Q Consensus       265 ~~~~dva~~v~~l~s~~~~  283 (305)
                      ++|+|+|+.++..+.....
T Consensus       250 ~~pedvA~~i~~~l~~~~~  268 (301)
T 3tjr_A          250 VSADDVARLTADAILANRL  268 (301)
T ss_dssp             CCHHHHHHHHHHHHHHTCS
T ss_pred             CCHHHHHHHHHHHHhcCCe
Confidence            8999999999999876543

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=100.00  E-value=7.5e-41  Score=301.27  Aligned_cols=253  Identities=22%  Similarity=0.264  Sum_probs=168.3

Q ss_pred             CCCCCCEEEEecC--CCchHHHHHHHHHHcCCeEEEEecCc-----------chhhh-----------HhhhcCC-----
Q 021960           27 RRLEGKVAIITGG--ARGIGEAAVRLFARHGAKVVIADVED-----------TLGSV-----------LASTLAP-----   77 (305)
Q Consensus        27 ~~l~~k~vlVtGa--s~giG~~ia~~l~~~g~~vv~~~r~~-----------~~~~~-----------~~~~~~~-----   77 (305)
                      ++|++|++|||||  ++|||+++|+.|+++|++|++++|++           ...+.           ..+.+..     
T Consensus         5 ~~l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (319)
T 2ptg_A            5 VDLRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVDL   84 (319)
T ss_dssp             CCCTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC--------------------------------
T ss_pred             cccCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhccccc
Confidence            4578999999999  89999999999999999999998642           11110           1111100     


Q ss_pred             CCeEEEEec------------CCC--------HHHHHHHHHHHHHhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHH
Q 021960           78 APVTFVHCD------------VSL--------EEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNV  137 (305)
Q Consensus        78 ~~v~~~~~D------------~~d--------~~~i~~~~~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~  137 (305)
                      ....++.+|            ++|        .++++++++++.+.+|++|+||||||....  ...++.+.+.++|++.
T Consensus        85 ~~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~--~~~~~~~~~~~~~~~~  162 (319)
T 2ptg_A           85 VFDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPE--VTKPLLQTSRKGYLAA  162 (319)
T ss_dssp             CCSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSS--SSSCGGGCCHHHHHHH
T ss_pred             cccccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCC--CCCccccCCHHHHHHH
Confidence            012344444            222        458999999999999999999999996531  1256788899999999


Q ss_pred             HHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCC-ccchhhHHHHHHHHHHHHHHHCc-CCcEEEEEeCCcc
Q 021960          138 MRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGP-HAYTASKHAIVGLTKNAACELGR-YGIRVNCISPFGV  215 (305)
Q Consensus       138 ~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~-~~Y~~sKaa~~~~~~~la~e~~~-~~i~v~~v~PG~v  215 (305)
                      +++|+.+++++++.++|.|.+  .|+||++||.++..+.++. ..|+++|+++++|+++++.|+++ +||+||+|+||++
T Consensus       163 ~~vN~~g~~~l~~~~~~~m~~--~g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v  240 (319)
T 2ptg_A          163 VSSSSYSFVSLLQHFLPLMKE--GGSALALSYIASEKVIPGYGGGMSSAKAALESDCRTLAFEAGRARAVRVNCISAGPL  240 (319)
T ss_dssp             HHHHTHHHHHHHHHHGGGEEE--EEEEEEEEECC------------------THHHHHHHHHHHHHHHCCEEEEEEECCC
T ss_pred             HhHhhHHHHHHHHHHHHHHhc--CceEEEEeccccccccCccchhhHHHHHHHHHHHHHHHHHhccccCeeEEEEeeCCc
Confidence            999999999999999999965  3899999999999888887 69999999999999999999985 8999999999999


Q ss_pred             ccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCC
Q 021960          216 ATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGG  295 (305)
Q Consensus       216 ~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG  295 (305)
                      +|+|........  .             +...+........ ..|.+++.+|+|+|+.++||+++.++++||++|.+|||
T Consensus       241 ~T~~~~~~~~~~--~-------------~~~~~~~~~~~~~-~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG  304 (319)
T 2ptg_A          241 KSRAASAIGKAG--D-------------KTFIDLAIDYSEA-NAPLQKELESDDVGRAALFLLSPLARAVTGATLYVDNG  304 (319)
T ss_dssp             C-----------------------------------------------CCCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             cChhhhhccccc--c-------------hhhHHHHHHHHhc-cCCCCCCCCHHHHHHHHHHHhCcccCCccCCEEEECCC
Confidence            999854321100  0             0000000000000 24668889999999999999999999999999999999


Q ss_pred             cccc
Q 021960          296 VTTS  299 (305)
Q Consensus       296 ~~~~  299 (305)
                      +++.
T Consensus       305 ~~~~  308 (319)
T 2ptg_A          305 LHAM  308 (319)
T ss_dssp             CTTC
T ss_pred             ceee
Confidence            8764

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=100.00  E-value=2e-39  Score=285.16  Aligned_cols=253  Identities=29%  Similarity=0.416  Sum_probs=205.6

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEec-CcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHh
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADV-EDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSR  103 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r-~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~  103 (305)
                      +++++|++|||||+||||++++++|+++|++|++++| +....+.+.+.+  .+.++.++.+|++|.++++++++++.+.
T Consensus        17 ~~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (274)
T 1ja9_A           17 KPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSH   96 (274)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999988 544433332222  2456889999999999999999999999


Q ss_pred             cCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccc-cCCCCCccc
Q 021960          104 YGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGV-MGGLGPHAY  182 (305)
Q Consensus       104 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~-~~~~~~~~Y  182 (305)
                      ++++|+||||||....    .++.+.+.+++++.+++|+.+++++++.+++.|.+ + ++||++||..+. .+.++...|
T Consensus        97 ~~~~d~vi~~Ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~-~~iv~~sS~~~~~~~~~~~~~Y  170 (274)
T 1ja9_A           97 FGGLDFVMSNSGMEVW----CDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRR-G-GRIILTSSIAAVMTGIPNHALY  170 (274)
T ss_dssp             HSCEEEEECCCCCCCC----CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEE-E-EEEEEECCGGGTCCSCCSCHHH
T ss_pred             cCCCCEEEECCCCCCC----cccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh-C-CEEEEEcChHhccCCCCCCchH
Confidence            9999999999997643    46678899999999999999999999999999863 3 899999999988 778889999


Q ss_pred             hhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCC
Q 021960          183 TASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKG  262 (305)
Q Consensus       183 ~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (305)
                      +++|++++.+++.++.|++.+||++++|+||+++|++...........      .....+.++....+.   .  ..+.+
T Consensus       171 ~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~------~~~~~~~~~~~~~~~---~--~~~~~  239 (274)
T 1ja9_A          171 AGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPG------GYKGMPQEKIDEGLA---N--MNPLK  239 (274)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTT------CCTTCCHHHHHHHHH---H--TSTTS
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhccccccccc------ccccCchHHHHHHHH---h--cCCCC
Confidence            999999999999999999999999999999999999865321110000      000111111111111   1  24667


Q ss_pred             CCCCHHHHHHHHHHhccCCCCceeccEEEecCCc
Q 021960          263 TTLRSKDIAEAALYLASDESRYVSGHNLVVDGGV  296 (305)
Q Consensus       263 ~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~  296 (305)
                      ++++++|+|+.+++|+++...+++|++|++|||+
T Consensus       240 ~~~~~~dva~~i~~l~~~~~~~~~G~~~~v~gG~  273 (274)
T 1ja9_A          240 RIGYPADIGRAVSALCQEESEWINGQVIKLTGGG  273 (274)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             CccCHHHHHHHHHHHhCcccccccCcEEEecCCc
Confidence            8899999999999999988889999999999996

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=100.00  E-value=9.3e-39  Score=274.86  Aligned_cols=228  Identities=30%  Similarity=0.407  Sum_probs=189.6

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDI  109 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~  109 (305)
                      .+|++|||||+||||+++++.|+++|++|++++|+....+.+.+.+.  ++.++.+|++|.++++++++++.+.++++|+
T Consensus         4 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   81 (234)
T 2ehd_A            4 MKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELE--GALPLPGDVREEGDWARAVAAMEEAFGELSA   81 (234)
T ss_dssp             CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST--TCEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh--hceEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            46899999999999999999999999999999998766555544432  5888999999999999999999999999999


Q ss_pred             EEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhHHHH
Q 021960          110 LYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAI  189 (305)
Q Consensus       110 li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKaa~  189 (305)
                      ||||||....    .++.+.+.++|++.+++|+.+++++++.+++.|.+++.++||++||..+..+.++...|+++|+++
T Consensus        82 li~~Ag~~~~----~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~  157 (234)
T 2ehd_A           82 LVNNAGVGVM----KPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNPFKGGAAYNASKFGL  157 (234)
T ss_dssp             EEECCCCCCC----SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTSCCTTCHHHHHHHHHH
T ss_pred             EEECCCcCCC----CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcCCCCCCchhhHHHHHH
Confidence            9999997643    567788999999999999999999999999999888889999999999999888999999999999


Q ss_pred             HHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCCHHH
Q 021960          190 VGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSKD  269 (305)
Q Consensus       190 ~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  269 (305)
                      +.++++++.|++++||++++|+||+++|++....                  +  +   .   +         ..++|+|
T Consensus       158 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~------------------~--~---~---~---------~~~~~~d  202 (234)
T 2ehd_A          158 LGLAGAAMLDLREANVRVVNVLPGSVDTGFAGNT------------------P--G---Q---A---------WKLKPED  202 (234)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEECC---------------------------------------------------CCHHH
T ss_pred             HHHHHHHHHHHhhcCcEEEEEEeCCCcCCccccc------------------c--c---c---c---------CCCCHHH
Confidence            9999999999999999999999999999974311                  0  0   0   0         0358999


Q ss_pred             HHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          270 IAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       270 va~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      +|+.++|++++...+++|+++..++...+
T Consensus       203 vA~~~~~l~~~~~~~~~g~~~~~~~~~~~  231 (234)
T 2ehd_A          203 VAQAVLFALEMPGHAMVSEIELRPTRPTS  231 (234)
T ss_dssp             HHHHHHHHHHSCCSSCCCEEECCC-----
T ss_pred             HHHHHHHHhCCCcccccceEEEeecCCCC
Confidence            99999999999999999998877665443

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=7.7e-39  Score=277.28  Aligned_cols=225  Identities=18%  Similarity=0.211  Sum_probs=191.5

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHcC--CeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcC-
Q 021960           29 LEGKVAIITGGARGIGEAAVRLFARHG--AKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYG-  105 (305)
Q Consensus        29 l~~k~vlVtGas~giG~~ia~~l~~~g--~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g-  105 (305)
                      |++|++|||||++|||+++++.|+++|  ++|++++|+....+.+.+. .+.++.++.+|++|.++++++++++.+.++ 
T Consensus         1 m~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   79 (250)
T 1yo6_A            1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSI-KDSRVHVLPLTVTCDKSLDTFVSKVGEIVGS   79 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTC-CCTTEEEEECCTTCHHHHHHHHHHHHHHHGG
T ss_pred             CCCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhc-cCCceEEEEeecCCHHHHHHHHHHHHHhcCC
Confidence            467999999999999999999999999  9999999987766555433 355799999999999999999999999988 


Q ss_pred             -CccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC------C-----CCEEEEecccccc
Q 021960          106 -RLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINR------G-----GGCIISTASVAGV  173 (305)
Q Consensus       106 -~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~------~-----~~~iv~isS~~~~  173 (305)
                       ++|+||||||.....   .++.+.+.+++++.+++|+.+++++++.+++.|.++      +     .++||++||..+.
T Consensus        80 ~~id~li~~Ag~~~~~---~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~  156 (250)
T 1yo6_A           80 DGLSLLINNAGVLLSY---GTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGS  156 (250)
T ss_dssp             GCCCEEEECCCCCCCB---CTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGC
T ss_pred             CCCcEEEECCcccCCC---cccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCccc
Confidence             899999999986521   566778999999999999999999999999999776      5     7899999999988


Q ss_pred             cCC-------CCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHH
Q 021960          174 MGG-------LGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKE  246 (305)
Q Consensus       174 ~~~-------~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (305)
                      .+.       ++...|+++|+++++++++++.|++++||++++|+||+++|+|...                        
T Consensus       157 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~------------------------  212 (250)
T 1yo6_A          157 ITDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK------------------------  212 (250)
T ss_dssp             STTCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC-------------------------------
T ss_pred             cCCcccccccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCCC------------------------
Confidence            776       5778999999999999999999999999999999999999998421                        


Q ss_pred             HHHHHHHHhhcCCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCc
Q 021960          247 VRKMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGV  296 (305)
Q Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~  296 (305)
                                     ....+++|+|+.+++++++...+++|+++.+|||.
T Consensus       213 ---------------~~~~~~~~~a~~~~~~~~~~~~~~~G~~~~~~g~~  247 (250)
T 1yo6_A          213 ---------------NAALTVEQSTAELISSFNKLDNSHNGRFFMRNLKP  247 (250)
T ss_dssp             ---------------------HHHHHHHHHHHTTCCGGGTTCEEETTEEE
T ss_pred             ---------------CCCCCHHHHHHHHHHHHhcccccCCCeEEEECCcC
Confidence                           13457999999999999998889999999999985

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=100.00  E-value=1e-38  Score=282.10  Aligned_cols=248  Identities=23%  Similarity=0.300  Sum_probs=199.4

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 021960           29 LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLD  108 (305)
Q Consensus        29 l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id  108 (305)
                      +++|++|||||+||||+++|+.|+++|++|++++|+....+.+.... +.++.++.+|++|.++++++++++.+.++++|
T Consensus         3 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id   81 (281)
T 3m1a_A            3 ESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAY-PDRAEAISLDVTDGERIDVVAADVLARYGRVD   81 (281)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHC-TTTEEEEECCTTCHHHHHHHHHHHHHHHSCCS
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-cCCceEEEeeCCCHHHHHHHHHHHHHhCCCCC
Confidence            56899999999999999999999999999999999887766655544 45699999999999999999999999999999


Q ss_pred             EEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhHHH
Q 021960          109 ILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHA  188 (305)
Q Consensus       109 ~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKaa  188 (305)
                      +||||||....    .++.+.+.++|++.+++|+.+++++++.+++.|.+++.++||++||..+..+.++...|++||++
T Consensus        82 ~lv~~Ag~~~~----~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  157 (281)
T 3m1a_A           82 VLVNNAGRTQV----GAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQLSFAGFSAYSATKAA  157 (281)
T ss_dssp             EEEECCCCEEE----CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHHH
T ss_pred             EEEECCCcCCC----CChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccCCCCCchHHHHHHHH
Confidence            99999997643    56778899999999999999999999999999998888999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCCHH
Q 021960          189 IVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSK  268 (305)
Q Consensus       189 ~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (305)
                      +++++++++.|++++||+|++|+||+++|++...........         ................  ..+.+++.+|+
T Consensus       158 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~--~~~~~~~~~~~  226 (281)
T 3m1a_A          158 LEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEE---------NPAYAEKVGPTRQLVQ--GSDGSQPGDPA  226 (281)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCB---------CTTTHHHHHHHHHHHH--C-----CBCHH
T ss_pred             HHHHHHHHHHHhhccCcEEEEEecCccccccccccccccCCc---------chhhHHHhHHHHHHHh--hccCCCCCCHH
Confidence            999999999999999999999999999999864321110000         0000111111122221  24567788999


Q ss_pred             HHHHHHHHhccCCCCceeccEEEecCC
Q 021960          269 DIAEAALYLASDESRYVSGHNLVVDGG  295 (305)
Q Consensus       269 dva~~v~~l~s~~~~~~tG~~i~idgG  295 (305)
                      |+|++++++++++.   .|..+++.++
T Consensus       227 dva~a~~~~~~~~~---~~~~~~l~s~  250 (281)
T 3m1a_A          227 KAAAAIRLALDTEK---TPLRLALGGD  250 (281)
T ss_dssp             HHHHHHHHHHHSSS---CCSEEEESHH
T ss_pred             HHHHHHHHHHhCCC---CCeEEecCch
Confidence            99999999998763   4555555443

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=100.00  E-value=6.9e-40  Score=291.25  Aligned_cols=232  Identities=21%  Similarity=0.205  Sum_probs=186.5

Q ss_pred             CCCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           25 SHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        25 ~~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      ..++++||++|||||++|||+++++.|+++|++|++++|+....+...+.+ +.++.++.+|++|.++++++++++    
T Consensus        10 ~~~~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~v~~~~~~~----   84 (291)
T 3rd5_A           10 DLPSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTM-AGQVEVRELDLQDLSSVRRFADGV----   84 (291)
T ss_dssp             GCCCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTS-SSEEEEEECCTTCHHHHHHHHHTC----
T ss_pred             hccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-cCCeeEEEcCCCCHHHHHHHHHhc----
Confidence            345789999999999999999999999999999999999987766665554 456899999999999999988766    


Q ss_pred             CCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccC---------
Q 021960          105 GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMG---------  175 (305)
Q Consensus       105 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~---------  175 (305)
                      +++|+||||||...      +..+.+.++|++.+++|+.+++++++.++|.|.+    +||++||.++..+         
T Consensus        85 ~~iD~lv~nAg~~~------~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~----riv~isS~~~~~~~~~~~~~~~  154 (291)
T 3rd5_A           85 SGADVLINNAGIMA------VPYALTVDGFESQIGTNHLGHFALTNLLLPRLTD----RVVTVSSMAHWPGRINLEDLNW  154 (291)
T ss_dssp             CCEEEEEECCCCCS------CCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEE----EEEEECCGGGTTCCCCSSCTTC
T ss_pred             CCCCEEEECCcCCC------CcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh----heeEeechhhccCCCCcccccc
Confidence            78999999999863      2345677889999999999999999999998854    7999999988765         


Q ss_pred             ----CCCCccchhhHHHHHHHHHHHHHHHCcCC--cEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHH
Q 021960          176 ----GLGPHAYTASKHAIVGLTKNAACELGRYG--IRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRK  249 (305)
Q Consensus       176 ----~~~~~~Y~~sKaa~~~~~~~la~e~~~~~--i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (305)
                          .++...|++||+++++|++.++.|++++|  |+|++|+||+++|+|.......                   ..+.
T Consensus       155 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~~~~-------------------~~~~  215 (291)
T 3rd5_A          155 RSRRYSPWLAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASGRK-------------------LGDA  215 (291)
T ss_dssp             SSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC------------------------------
T ss_pred             cccCCCCcchHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCccccccccchH-------------------HHHH
Confidence                24456899999999999999999999877  9999999999999986542111                   0000


Q ss_pred             HHHHHhhcCCCCCCCC-CHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          250 MEEFVSGLGNLKGTTL-RSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       250 ~~~~~~~~~~~~~~~~-~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      +.      ..+.++.. +|+|+|+.++||++++  +++|+.|.+|||+..
T Consensus       216 ~~------~~~~~~~~~~~~~~A~~~~~l~~~~--~~~G~~~~vdgG~~~  257 (291)
T 3rd5_A          216 LM------SAATRVVATDADFGARQTLYAASQD--LPGDSFVGPRFGYLG  257 (291)
T ss_dssp             ---------------CHHHHHHHHHHHHHHHSC--CCTTCEEEETTSSSS
T ss_pred             HH------HHHHHHHhCCHHHHHHHHHHHHcCC--CCCCceeCCcccccC
Confidence            00      12334555 4999999999999984  899999999999753

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=2.5e-39  Score=284.11  Aligned_cols=241  Identities=30%  Similarity=0.464  Sum_probs=192.7

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc----CCCCeEEEEecCCCHHHHHHHHHHHHHh
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL----APAPVTFVHCDVSLEEDIENLINSTVSR  103 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~----~~~~v~~~~~D~~d~~~i~~~~~~~~~~  103 (305)
                      .+++|++|||||++|||+++++.|+++|++|++++|+....+...+.+    .+.++.++.+|++|.++++++++++.+.
T Consensus         4 m~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   83 (267)
T 2gdz_A            4 MVNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDH   83 (267)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHH
Confidence            367899999999999999999999999999999999876544433322    1346889999999999999999999999


Q ss_pred             cCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC---CCEEEEecccccccCCCCCc
Q 021960          104 YGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRG---GGCIISTASVAGVMGGLGPH  180 (305)
Q Consensus       104 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~---~~~iv~isS~~~~~~~~~~~  180 (305)
                      ++++|+||||||...            .++|++.+++|+.+++.+++.+++.|.+++   .++||++||..+..+.++..
T Consensus        84 ~g~id~lv~~Ag~~~------------~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  151 (267)
T 2gdz_A           84 FGRLDILVNNAGVNN------------EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQP  151 (267)
T ss_dssp             HSCCCEEEECCCCCC------------SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTCH
T ss_pred             cCCCCEEEECCCCCC------------hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCCCCCc
Confidence            999999999999642            245788999999999999999999997653   68999999999999988999


Q ss_pred             cchhhHHHHHHHHHHH--HHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcC
Q 021960          181 AYTASKHAIVGLTKNA--ACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLG  258 (305)
Q Consensus       181 ~Y~~sKaa~~~~~~~l--a~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (305)
                      .|+++|++++++++++  +.|++++||+||+|+||+++|++.......     ..  ...+    ....+.+....    
T Consensus       152 ~Y~~sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-----~~--~~~~----~~~~~~~~~~~----  216 (267)
T 2gdz_A          152 VYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKE-----EN--MGQY----IEYKDHIKDMI----  216 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCH-----HH--HGGG----GGGHHHHHHHH----
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhhccccc-----cc--cchh----hhHHHHHHHHh----
Confidence            9999999999999995  688989999999999999999985432110     00  0000    00000111111    


Q ss_pred             CCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          259 NLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       259 ~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                       +..++++|+|+|+.++||+++.  +++|++|.+|||...
T Consensus       217 -~~~~~~~~~dvA~~v~~l~s~~--~~~G~~~~v~gg~~~  253 (267)
T 2gdz_A          217 -KYYGILDPPLIANGLITLIEDD--ALNGAIMKITTSKGI  253 (267)
T ss_dssp             -HHHCCBCHHHHHHHHHHHHHCT--TCSSCEEEEETTTEE
T ss_pred             -ccccCCCHHHHHHHHHHHhcCc--CCCCcEEEecCCCcc
Confidence             1124678999999999999976  499999999998754

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=100.00  E-value=1.4e-39  Score=292.76  Aligned_cols=230  Identities=27%  Similarity=0.438  Sum_probs=192.9

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEec---------CcchhhhHhhhc--CCCCeEEEEecCCCHHHHHH
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADV---------EDTLGSVLASTL--APAPVTFVHCDVSLEEDIEN   95 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r---------~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~   95 (305)
                      +++++|++|||||++|||+++++.|+++|++|+++++         +....+...+.+  .+.   ...+|++|.+++++
T Consensus         5 ~~l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~---~~~~D~~~~~~~~~   81 (319)
T 1gz6_A            5 LRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGG---KAVANYDSVEAGEK   81 (319)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTC---EEEEECCCGGGHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCC---eEEEeCCCHHHHHH
Confidence            3578999999999999999999999999999999754         333333332222  122   23589999999999


Q ss_pred             HHHHHHHhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccC
Q 021960           96 LINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMG  175 (305)
Q Consensus        96 ~~~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~  175 (305)
                      +++++.+.++++|+||||||....    .++.+.+.++|+..+++|+.+++++++.++|.|.+++.++||++||.++..+
T Consensus        82 ~~~~~~~~~g~iD~lVnnAG~~~~----~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~~~  157 (319)
T 1gz6_A           82 LVKTALDTFGRIDVVVNNAGILRD----RSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYG  157 (319)
T ss_dssp             HHHHHHHHTSCCCEEEECCCCCCC----CCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHC
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCC----CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccC
Confidence            999999999999999999998643    4577889999999999999999999999999998888899999999999989


Q ss_pred             CCCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHh
Q 021960          176 GLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVS  255 (305)
Q Consensus       176 ~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (305)
                      .++...|++||+++++|++.++.|++++||+||+|+||++ |+|.....                 + .+    ..    
T Consensus       158 ~~~~~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~~~~~~-----------------~-~~----~~----  210 (319)
T 1gz6_A          158 NFGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRMTETVM-----------------P-ED----LV----  210 (319)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STTTGGGS-----------------C-HH----HH----
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-cccccccC-----------------C-hh----hh----
Confidence            8899999999999999999999999999999999999998 87643211                 1 00    00    


Q ss_pred             hcCCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          256 GLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       256 ~~~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                             ...+|+|+|+.++||+++. .+++|++|.+|||+..
T Consensus       211 -------~~~~p~dvA~~~~~l~s~~-~~~tG~~~~v~GG~~~  245 (319)
T 1gz6_A          211 -------EALKPEYVAPLVLWLCHES-CEENGGLFEVGAGWIG  245 (319)
T ss_dssp             -------HHSCGGGTHHHHHHHTSTT-CCCCSCEEEEETTEEE
T ss_pred             -------ccCCHHHHHHHHHHHhCch-hhcCCCEEEECCCeEE
Confidence                   1247899999999999974 5899999999999754

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=100.00  E-value=5.7e-40  Score=318.99  Aligned_cols=236  Identities=29%  Similarity=0.431  Sum_probs=184.0

Q ss_pred             CCCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEec---------CcchhhhHhhhc--CCCCeEEEEecCCCHHHH
Q 021960           25 SHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADV---------EDTLGSVLASTL--APAPVTFVHCDVSLEEDI   93 (305)
Q Consensus        25 ~~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r---------~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i   93 (305)
                      ...+++||++|||||++|||+++|+.|+++|++|++++|         +....+...+.+  .+..   ..+|++|.+++
T Consensus        13 ~~~~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~---~~~D~~d~~~~   89 (613)
T 3oml_A           13 GKLRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGE---AVADYNSVIDG   89 (613)
T ss_dssp             --CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCC---EEECCCCGGGH
T ss_pred             cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCe---EEEEeCCHHHH
Confidence            345789999999999999999999999999999999987         444443333332  1222   34899999999


Q ss_pred             HHHHHHHHHhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccc
Q 021960           94 ENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGV  173 (305)
Q Consensus        94 ~~~~~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~  173 (305)
                      +++++++.+.+|+||+||||||....    .++.+.+.++|++.+++|+.+++++++.++|.|.+++.|+||++||.++.
T Consensus        90 ~~~~~~~~~~~g~iDiLVnnAGi~~~----~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a~~  165 (613)
T 3oml_A           90 AKVIETAIKAFGRVDILVNNAGILRD----RSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGI  165 (613)
T ss_dssp             HHHHC----------CEECCCCCCCC----CCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHHHH
T ss_pred             HHHHHHHHHHCCCCcEEEECCCCCCC----CCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHHHc
Confidence            99999999999999999999998744    56788999999999999999999999999999999888999999999999


Q ss_pred             cCCCCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHH
Q 021960          174 MGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEF  253 (305)
Q Consensus       174 ~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (305)
                      .+.++...|++||+|+++|+++++.|++++||+||+|+||.+ |+|.....+.                  .        
T Consensus       166 ~~~~~~~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~-t~~~~~~~~~------------------~--------  218 (613)
T 3oml_A          166 YGNFGQVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAA-SRMTEGILPD------------------I--------  218 (613)
T ss_dssp             HCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------CCCCCH------------------H--------
T ss_pred             CCCCCChHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCC-Chhhhhccch------------------h--------
Confidence            999999999999999999999999999999999999999975 6654322110                  0        


Q ss_pred             HhhcCCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCccccccc
Q 021960          254 VSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTSRNC  302 (305)
Q Consensus       254 ~~~~~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~~~~  302 (305)
                             ..+.++|+|+|+.++||+++. .++||++|.+|||+.....|
T Consensus       219 -------~~~~~~pedvA~~v~~L~s~~-~~~tG~~i~vdGG~~~~~~~  259 (613)
T 3oml_A          219 -------LFNELKPKLIAPVVAYLCHES-CEDNGSYIESAAGWATKLHM  259 (613)
T ss_dssp             -------HHTTCCGGGTHHHHHHTTSTT-CCCCSCEEEEETTEEEEECC
T ss_pred             -------hhhcCCHHHHHHHHHHhcCCC-cCCCceEEEECCCeEEEEEE
Confidence                   012358999999999999998 89999999999998775544

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=100.00  E-value=5.6e-39  Score=279.76  Aligned_cols=238  Identities=22%  Similarity=0.261  Sum_probs=192.2

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCe-EEEEecCcc--hhhhHhhhcCCCCeEEEEecCCCH-HHHHHHHHHHHHh
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAK-VVIADVEDT--LGSVLASTLAPAPVTFVHCDVSLE-EDIENLINSTVSR  103 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~-vv~~~r~~~--~~~~~~~~~~~~~v~~~~~D~~d~-~~i~~~~~~~~~~  103 (305)
                      ++++|++|||||++|||++++++|+++|++ |++++|+..  ..+.+.+...+.++.++.+|++|. ++++++++++.+.
T Consensus         2 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (254)
T 1sby_A            2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQ   81 (254)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             CCCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHh
Confidence            478999999999999999999999999997 899998763  223333333345688999999998 9999999999999


Q ss_pred             cCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC---CCEEEEecccccccCCCCCc
Q 021960          104 YGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRG---GGCIISTASVAGVMGGLGPH  180 (305)
Q Consensus       104 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~---~~~iv~isS~~~~~~~~~~~  180 (305)
                      ++++|+||||||..            +.+++++.+++|+.+++++++.+++.|.+++   .++||++||.++..+.++..
T Consensus        82 ~g~id~lv~~Ag~~------------~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  149 (254)
T 1sby_A           82 LKTVDILINGAGIL------------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVP  149 (254)
T ss_dssp             HSCCCEEEECCCCC------------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTSH
T ss_pred             cCCCCEEEECCccC------------CHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCCCCch
Confidence            99999999999973            2356889999999999999999999997654   58999999999999999999


Q ss_pred             cchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCC
Q 021960          181 AYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNL  260 (305)
Q Consensus       181 ~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (305)
                      .|+++|+++++|+++++.++.++||+|++|+||+++|+|........          .  ..  ...   ......  . 
T Consensus       150 ~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~----------~--~~--~~~---~~~~~~--~-  209 (254)
T 1sby_A          150 VYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWL----------D--VE--PRV---AELLLS--H-  209 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGG----------G--SC--TTH---HHHHTT--S-
T ss_pred             HHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCccccccchhh----------h--hh--HHH---HHHHhc--C-
Confidence            99999999999999999999888999999999999999865321000          0  00  000   111111  1 


Q ss_pred             CCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCccccccc
Q 021960          261 KGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTSRNC  302 (305)
Q Consensus       261 ~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~~~~  302 (305)
                        .+.+|+|+|+.++++++   ++++|+++.+|||.....+|
T Consensus       210 --~~~~~~dvA~~i~~~~~---~~~~G~~~~v~gG~~~~~~~  246 (254)
T 1sby_A          210 --PTQTSEQCGQNFVKAIE---ANKNGAIWKLDLGTLEAIEW  246 (254)
T ss_dssp             --CCEEHHHHHHHHHHHHH---HCCTTCEEEEETTEEEECCC
T ss_pred             --CCCCHHHHHHHHHHHHH---cCCCCCEEEEeCCceeEecc
Confidence              23489999999999996   46899999999997544444

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=4.8e-38  Score=271.24  Aligned_cols=231  Identities=29%  Similarity=0.370  Sum_probs=192.7

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEE
Q 021960           31 GKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDIL  110 (305)
Q Consensus        31 ~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~l  110 (305)
                      +|++|||||+||||++++++|+++|++|++++|+.. .         .++.++.+|++|.++++++++++ +.++++|+|
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~---------~~~~~~~~D~~~~~~~~~~~~~~-~~~~~~d~l   70 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-G---------EDLIYVEGDVTREEDVRRAVARA-QEEAPLFAV   70 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-S---------SSSEEEECCTTCHHHHHHHHHHH-HHHSCEEEE
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-c---------cceEEEeCCCCCHHHHHHHHHHH-HhhCCceEE
Confidence            689999999999999999999999999999999864 1         12578999999999999999999 888899999


Q ss_pred             EEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC---C---CEEEEecccccccCCCCCccchh
Q 021960          111 YNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRG---G---GCIISTASVAGVMGGLGPHAYTA  184 (305)
Q Consensus       111 i~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~---~---~~iv~isS~~~~~~~~~~~~Y~~  184 (305)
                      |||||............+.+.+++++.+++|+.+++++++.+.+.|.+++   .   ++||++||..+..+.++...|++
T Consensus        71 i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~  150 (242)
T 1uay_A           71 VSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAA  150 (242)
T ss_dssp             EECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTCHHHHH
T ss_pred             EEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCCCchhhH
Confidence            99999765421111112245669999999999999999999999997754   3   49999999999999889999999


Q ss_pred             hHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCC-CC
Q 021960          185 SKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLK-GT  263 (305)
Q Consensus       185 sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  263 (305)
                      +|++++.+++.++.|++++||++++|+||+++|++.....                   ....+.   +..  ..+. ++
T Consensus       151 sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~-------------------~~~~~~---~~~--~~~~~~~  206 (242)
T 1uay_A          151 SKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLP-------------------EKAKAS---LAA--QVPFPPR  206 (242)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSC-------------------HHHHHH---HHT--TCCSSCS
T ss_pred             HHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhccc-------------------hhHHHH---HHh--hCCCccc
Confidence            9999999999999999999999999999999999854321                   011111   111  2355 78


Q ss_pred             CCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          264 TLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       264 ~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      +.+|+|+|+.+++|+++  ++++|++|.+|||+++
T Consensus       207 ~~~~~dva~~~~~l~~~--~~~~G~~~~v~gG~~~  239 (242)
T 1uay_A          207 LGRPEEYAALVLHILEN--PMLNGEVVRLDGALRM  239 (242)
T ss_dssp             CCCHHHHHHHHHHHHHC--TTCCSCEEEESTTCCC
T ss_pred             CCCHHHHHHHHHHHhcC--CCCCCcEEEEcCCeec
Confidence            88999999999999988  6899999999999865

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=7.1e-38  Score=276.52  Aligned_cols=241  Identities=28%  Similarity=0.371  Sum_probs=198.5

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc----CCCCeEEEEecCCCHHHHHHHHHHHHH
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL----APAPVTFVHCDVSLEEDIENLINSTVS  102 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~----~~~~v~~~~~D~~d~~~i~~~~~~~~~  102 (305)
                      .++++|++|||||++|||+++++.|+++|++|++++|+....+.+.+.+    ...++.++.+|++|.++++++++++.+
T Consensus        28 ~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  107 (279)
T 1xg5_A           28 ERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRS  107 (279)
T ss_dssp             GGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999876554443332    124588899999999999999999999


Q ss_pred             hcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCC--CEEEEecccccc--cCCCC
Q 021960          103 RYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGG--GCIISTASVAGV--MGGLG  178 (305)
Q Consensus       103 ~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~--~~iv~isS~~~~--~~~~~  178 (305)
                      .++++|+||||||....    .++.+.+.++|++.+++|+.+++++++.+++.|.+++.  ++||++||..+.  .+.++
T Consensus       108 ~~g~iD~vi~~Ag~~~~----~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~  183 (279)
T 1xg5_A          108 QHSGVDICINNAGLARP----DTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSV  183 (279)
T ss_dssp             HHCCCSEEEECCCCCCC----CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCGG
T ss_pred             hCCCCCEEEECCCCCCC----CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhcccCCCCC
Confidence            99999999999997643    56677899999999999999999999999999987763  899999999988  56777


Q ss_pred             CccchhhHHHHHHHHHHHHHHHC--cCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhh
Q 021960          179 PHAYTASKHAIVGLTKNAACELG--RYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSG  256 (305)
Q Consensus       179 ~~~Y~~sKaa~~~~~~~la~e~~--~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (305)
                      ...|+++|++++.|++.++.|++  ..+|++++|+||+++|++....+..               . .+.   ....   
T Consensus       184 ~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~---------------~-~~~---~~~~---  241 (279)
T 1xg5_A          184 THFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDK---------------D-PEK---AAAT---  241 (279)
T ss_dssp             GHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTT---------------C-HHH---HHHH---
T ss_pred             CchhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhhhhhccc---------------C-hhH---Hhhh---
Confidence            88999999999999999999998  7899999999999999985332211               0 011   1110   


Q ss_pred             cCCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCC
Q 021960          257 LGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGG  295 (305)
Q Consensus       257 ~~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG  295 (305)
                        .+..++++|+|+|+.++|++++...+.+|++...++|
T Consensus       242 --~~~~~~~~~~dvA~~i~~l~~~~~~~~~g~i~i~~~~  278 (279)
T 1xg5_A          242 --YEQMKCLKPEDVAEAVIYVLSTPAHIQIGDIQMRPTG  278 (279)
T ss_dssp             --HC---CBCHHHHHHHHHHHHHSCTTEEEEEEEEEETT
T ss_pred             --cccccCCCHHHHHHHHHHHhcCCcceEeeeEEEccCC
Confidence              1234678999999999999999888898976655554

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=100.00  E-value=5.2e-39  Score=291.96  Aligned_cols=242  Identities=14%  Similarity=0.001  Sum_probs=194.3

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHH-cCCeEEEEecCcchhh------------hHhhh--cCCCCeEEEEecCCCHHHH
Q 021960           29 LEGKVAIITGGARGIGEAAVRLFAR-HGAKVVIADVEDTLGS------------VLAST--LAPAPVTFVHCDVSLEEDI   93 (305)
Q Consensus        29 l~~k~vlVtGas~giG~~ia~~l~~-~g~~vv~~~r~~~~~~------------~~~~~--~~~~~v~~~~~D~~d~~~i   93 (305)
                      -.+|++|||||++|||+++|+.|++ +|++|++++++....+            ...+.  ..+.++..+.+|++|.+++
T Consensus        45 ~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~~~v  124 (405)
T 3zu3_A           45 NGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEIK  124 (405)
T ss_dssp             TCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHH
T ss_pred             CCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCHHHH
Confidence            3689999999999999999999999 9999999987654321            11111  1355688999999999999


Q ss_pred             HHHHHHHHHhcCCccEEEEcCCCCCCC---------CCCCcc---------------------cCCCHHHHHHHHHHHhH
Q 021960           94 ENLINSTVSRYGRLDILYNNAGVLGNQ---------RKHKSI---------------------IDFDADEFDNVMRVNVK  143 (305)
Q Consensus        94 ~~~~~~~~~~~g~id~li~nag~~~~~---------~~~~~~---------------------~~~~~~~~~~~~~~n~~  143 (305)
                      +++++++.+.+|+||+||||||.....         ....++                     .+.+.++|++.+++|..
T Consensus       125 ~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~Vn~~  204 (405)
T 3zu3_A          125 QLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVMGG  204 (405)
T ss_dssp             HHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSS
T ss_pred             HHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHhhch
Confidence            999999999999999999999974100         001233                     67899999999999999


Q ss_pred             HHH-HHHHHHHHHHHcCCCCEEEEecccccccCCCCC--ccchhhHHHHHHHHHHHHHHHCcC-CcEEEEEeCCcccccc
Q 021960          144 GMA-LGIKHAARVMINRGGGCIISTASVAGVMGGLGP--HAYTASKHAIVGLTKNAACELGRY-GIRVNCISPFGVATSM  219 (305)
Q Consensus       144 ~~~-~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~--~~Y~~sKaa~~~~~~~la~e~~~~-~i~v~~v~PG~v~T~~  219 (305)
                      +.+ ++++++.+.+..+++|+||++||+.+..+.+..  ..|++||+++++|+|+||.|++++ ||+||+|+||++.|++
T Consensus       205 ~~~~~~~~~~~~~~m~~~gG~IVniSSi~~~~~~p~~~~~aY~AaKaal~~ltrsLA~Ela~~~GIRVNaVaPG~i~T~~  284 (405)
T 3zu3_A          205 EDWQMWIDALLDAGVLAEGAQTTAFTYLGEKITHDIYWNGSIGAAKKDLDQKVLAIRESLAAHGGGDARVSVLKAVVSQA  284 (405)
T ss_dssp             HHHHHHHHHHHHHTCEEEEEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEECCCCCCHH
T ss_pred             hHHHHHHHHHHHHhhhhCCcEEEEEeCchhhCcCCCccchHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEEeCCCcCch
Confidence            988 778877654333446899999999999998877  999999999999999999999999 9999999999999998


Q ss_pred             chhcccCCCCCchhhhhhccCCCcH-HHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          220 LVNAWRNSGDGEEEDECMNFGIPSQ-KEVRKMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      ....                  |.. .....+.       .+.++.+++|||++.+.||+|+   ++.|+.+.+|++..+
T Consensus       285 s~~i------------------p~~p~y~~~l~-------~~mkr~G~~Ed~a~~i~~L~sd---~l~~~~~~~D~~~~~  336 (405)
T 3zu3_A          285 SSAI------------------PMMPLYLSLLF-------KVMKEKGTHEGCIEQVYSLYKD---SLCGDSPHMDQEGRL  336 (405)
T ss_dssp             HHTS------------------TTHHHHHHHHH-------HHHHHHTCCCCHHHHHHHHHHH---TTSSSCCCBCTTSCE
T ss_pred             hhcC------------------CCCcHHHHHHH-------HHHhcCCCcHHHHHHHHHHHhc---cccCCCCCcCCCcCC
Confidence            5432                  111 1111111       2456788999999999999998   588999999998543

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=100.00  E-value=1.1e-37  Score=273.20  Aligned_cols=229  Identities=20%  Similarity=0.202  Sum_probs=196.7

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHHcC---CeEEEEecCcchhhhHhhhc-CCCCeEEEEecCCCHHHHHHHHHHHH
Q 021960           26 HRRLEGKVAIITGGARGIGEAAVRLFARHG---AKVVIADVEDTLGSVLASTL-APAPVTFVHCDVSLEEDIENLINSTV  101 (305)
Q Consensus        26 ~~~l~~k~vlVtGas~giG~~ia~~l~~~g---~~vv~~~r~~~~~~~~~~~~-~~~~v~~~~~D~~d~~~i~~~~~~~~  101 (305)
                      ...+++|++|||||++|||++++++|+++|   ++|++++|+....+.+.+.. .+.++.++.+|++|.++++++++++.
T Consensus        16 ~~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   95 (267)
T 1sny_A           16 PRGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIE   95 (267)
T ss_dssp             ----CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHHhhccCCceEEEEecCCChHHHHHHHHHHH
Confidence            347789999999999999999999999999   99999999876544332221 13468999999999999999999999


Q ss_pred             HhcC--CccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC------C-----CCEEEEec
Q 021960          102 SRYG--RLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINR------G-----GGCIISTA  168 (305)
Q Consensus       102 ~~~g--~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~------~-----~~~iv~is  168 (305)
                      +.++  ++|+||||||....   ..++.+.+.+++++.+++|+.+++++++.+++.|.++      +     .++||++|
T Consensus        96 ~~~g~~~id~li~~Ag~~~~---~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~is  172 (267)
T 1sny_A           96 GVTKDQGLNVLFNNAGIAPK---SARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMS  172 (267)
T ss_dssp             HHHGGGCCSEEEECCCCCCC---CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEEC
T ss_pred             HhcCCCCccEEEECCCcCCC---ccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEe
Confidence            9888  89999999998642   1567788999999999999999999999999999765      3     68999999


Q ss_pred             ccccccCCC---CCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHH
Q 021960          169 SVAGVMGGL---GPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQK  245 (305)
Q Consensus       169 S~~~~~~~~---~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (305)
                      |..+..+.+   +...|+++|+++++|++.++.|++++||++++|+||+++|+|...                       
T Consensus       173 S~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-----------------------  229 (267)
T 1sny_A          173 SILGSIQGNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGS-----------------------  229 (267)
T ss_dssp             CGGGCSTTCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCT-----------------------
T ss_pred             cccccccCCCCCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCCC-----------------------
Confidence            999887653   677899999999999999999999999999999999999998421                       


Q ss_pred             HHHHHHHHHhhcCCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCc
Q 021960          246 EVRKMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGV  296 (305)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~  296 (305)
                                      ....+|+++|+.+++++++....++|+++.+|||.
T Consensus       230 ----------------~~~~~~~~~a~~~~~~~~~~~~~~~G~~~~~~g~~  264 (267)
T 1sny_A          230 ----------------SAPLDVPTSTGQIVQTISKLGEKQNGGFVNYDGTP  264 (267)
T ss_dssp             ----------------TCSBCHHHHHHHHHHHHHHCCGGGTTCEECTTSCB
T ss_pred             ----------------CCCCCHHHHHHHHHHHHHhcCcCCCCcEEccCCcC
Confidence                            13468999999999999988889999999999986

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=100.00  E-value=3.2e-37  Score=277.58  Aligned_cols=192  Identities=31%  Similarity=0.468  Sum_probs=169.9

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc----CCCCeEEEEecCCCHHHHHHHHHHHHH
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL----APAPVTFVHCDVSLEEDIENLINSTVS  102 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~----~~~~v~~~~~D~~d~~~i~~~~~~~~~  102 (305)
                      .++++|++|||||+||||+++++.|+++|++|++++|+....+...+.+    .+.++.++.+|++|.++++++++++.+
T Consensus         4 ~~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   83 (319)
T 3ioy_A            4 KDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEA   83 (319)
T ss_dssp             CCCTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            3678999999999999999999999999999999999877665544433    123689999999999999999999999


Q ss_pred             hcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC------CCCEEEEecccccccCC
Q 021960          103 RYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINR------GGGCIISTASVAGVMGG  176 (305)
Q Consensus       103 ~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~------~~~~iv~isS~~~~~~~  176 (305)
                      .++++|+||||||....    .++.+.+.+++++.+++|+.+++++++.+++.|.++      +.|+||++||.++..+.
T Consensus        84 ~~g~id~lv~nAg~~~~----~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~  159 (319)
T 3ioy_A           84 RFGPVSILCNNAGVNLF----QPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAA  159 (319)
T ss_dssp             HTCCEEEEEECCCCCCC----CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCC
T ss_pred             hCCCCCEEEECCCcCCC----CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCC
Confidence            99999999999998643    578889999999999999999999999999999765      57899999999999999


Q ss_pred             CCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchh
Q 021960          177 LGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVN  222 (305)
Q Consensus       177 ~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~  222 (305)
                      ++...|++||+|+++|+++++.|+.++||+|++|+||+|+|++...
T Consensus       160 ~~~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~  205 (319)
T 3ioy_A          160 GSPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYAS  205 (319)
T ss_dssp             SSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC------
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCcccc
Confidence            9999999999999999999999999999999999999999998654

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=100.00  E-value=6.5e-39  Score=293.84  Aligned_cols=243  Identities=15%  Similarity=0.054  Sum_probs=192.2

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHH-cCCeEEEEecCcchhhh------------Hhhh--cCCCCeEEEEecCCCHHHHH
Q 021960           30 EGKVAIITGGARGIGEAAVRLFAR-HGAKVVIADVEDTLGSV------------LAST--LAPAPVTFVHCDVSLEEDIE   94 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~-~g~~vv~~~r~~~~~~~------------~~~~--~~~~~v~~~~~D~~d~~~i~   94 (305)
                      .+|++|||||++|||+++|+.|++ +|++|++++|+....+.            +.+.  ..+.++..+.+|++|.++++
T Consensus        60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~~v~  139 (422)
T 3s8m_A           60 GPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAARA  139 (422)
T ss_dssp             SCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHHHHH
Confidence            489999999999999999999999 99999999887554321            1111  13556889999999999999


Q ss_pred             HHHHHHHHhc-CCccEEEEcCCCCCCC---------CCCCcc---------------------cCCCHHHHHHHHHHHhH
Q 021960           95 NLINSTVSRY-GRLDILYNNAGVLGNQ---------RKHKSI---------------------IDFDADEFDNVMRVNVK  143 (305)
Q Consensus        95 ~~~~~~~~~~-g~id~li~nag~~~~~---------~~~~~~---------------------~~~~~~~~~~~~~~n~~  143 (305)
                      ++++++.+.+ |+||+||||||.....         ....++                     .+.+.++|++.+++|..
T Consensus       140 ~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~Vn~~  219 (422)
T 3s8m_A          140 QVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVMGG  219 (422)
T ss_dssp             HHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSS
T ss_pred             HHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHhhch
Confidence            9999999999 9999999999962000         001222                     36799999999999999


Q ss_pred             HHH-HHHHHHHHHHHcCCCCEEEEecccccccCCCCC--ccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccc
Q 021960          144 GMA-LGIKHAARVMINRGGGCIISTASVAGVMGGLGP--HAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSML  220 (305)
Q Consensus       144 ~~~-~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~--~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~  220 (305)
                      +.+ .+++.+.+.+..+++|+||++||.++..+.+..  ..|++||+++.+|+|+||.|++++||+||+|+||+|+|+|.
T Consensus       220 ~~~~~~~~a~~~~~m~~~gG~IVniSSi~g~~~~p~~~~~aY~ASKaAl~~lTrsLA~Ela~~GIRVNaVaPG~i~T~~~  299 (422)
T 3s8m_A          220 QDWELWIDALEGAGVLADGARSVAFSYIGTEITWPIYWHGALGKAKVDLDRTAQRLNARLAKHGGGANVAVLKSVVTQAS  299 (422)
T ss_dssp             HHHHHHHHHHHHTTCEEEEEEEEEEEECCCGGGHHHHTSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTG
T ss_pred             hHHHHHHHHHHHHHHhhCCCEEEEEeCchhhccCCCccchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEcCCCcChhh
Confidence            887 778887664433446899999999999888766  89999999999999999999999999999999999999986


Q ss_pred             hhcccCCCCCchhhhhhccCCCcHHH-HHHHHHHHhhcCCCCCCCCCHHHHHHHHHHhccCCCCcee-ccEEEecCCccc
Q 021960          221 VNAWRNSGDGEEEDECMNFGIPSQKE-VRKMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVS-GHNLVVDGGVTT  298 (305)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~~~~~t-G~~i~idgG~~~  298 (305)
                      ...                  |.... ....       ..+.++.++||||++.+.||+|+.- |.+ |+...+|++..+
T Consensus       300 ~~i------------------p~~~~~~~~~-------~~~m~r~G~pEdva~~v~~L~sd~l-y~~~~~~~~~d~~~~~  353 (422)
T 3s8m_A          300 AAI------------------PVMPLYISMV-------YKIMKEKGLHEGTIEQLDRLFRERL-YRQDGQPAEVDEQNRL  353 (422)
T ss_dssp             GGS------------------THHHHHHHHH-------HHHHHHTTCCCCHHHHHHHHHHHTT-TCTTCCCCCCCTTSCE
T ss_pred             hcC------------------CCChHHHHHH-------HhhhcCCcChHHHHHHHHHHhcchh-hccCCCCcccCCCCCC
Confidence            432                  11111 1111       1245788899999999999999864 665 777668887543

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=100.00  E-value=1.6e-38  Score=277.02  Aligned_cols=221  Identities=23%  Similarity=0.324  Sum_probs=173.9

Q ss_pred             CEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEEE
Q 021960           32 KVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILY  111 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~li  111 (305)
                      |++|||||++|||+++++.|+++|++|++++|+....+.          . +.+|++|.++++++++++   .+++|+||
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~----------~-~~~Dl~~~~~v~~~~~~~---~~~id~lv   67 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA----------D-LSTAEGRKQAIADVLAKC---SKGMDGLV   67 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC----------C-TTSHHHHHHHHHHHHTTC---TTCCSEEE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc----------c-cccCCCCHHHHHHHHHHh---CCCCCEEE
Confidence            689999999999999999999999999999998654321          1 568999999998887633   37899999


Q ss_pred             EcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccc------------------
Q 021960          112 NNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGV------------------  173 (305)
Q Consensus       112 ~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~------------------  173 (305)
                      ||||.....           +.+++.+++|+.+++++++.++|.|.+++.++||++||..+.                  
T Consensus        68 ~~Ag~~~~~-----------~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~  136 (257)
T 1fjh_A           68 LCAGLGPQT-----------KVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEE  136 (257)
T ss_dssp             ECCCCCTTC-----------SSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCH
T ss_pred             ECCCCCCCc-----------ccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhcccch
Confidence            999975311           128899999999999999999999988888999999999988                  


Q ss_pred             ----------cCCCCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCc
Q 021960          174 ----------MGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPS  243 (305)
Q Consensus       174 ----------~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (305)
                                .+.++...|++||++++.++++++.|++++||+|++|+||+++|++.......                 
T Consensus       137 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~-----------------  199 (257)
T 1fjh_A          137 AKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQD-----------------  199 (257)
T ss_dssp             HHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC-----------------------------
T ss_pred             hhhhhhhhcccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhhccc-----------------
Confidence                      34456789999999999999999999999999999999999999985432111                 


Q ss_pred             HHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          244 QKEVRKMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                       ..   .......+..+.+++.+|+|+|+.++||++++.+++||++|.+|||...
T Consensus       200 -~~---~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~~~~~tG~~~~vdgG~~~  250 (257)
T 1fjh_A          200 -PR---YGESIAKFVPPMGRRAEPSEMASVIAFLMSPAASYVHGAQIVIDGGIDA  250 (257)
T ss_dssp             -------------CCCSTTSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESTTHHH
T ss_pred             -hh---HHHHHHhcccccCCCCCHHHHHHHHHHHhCchhcCCcCCEEEECCCccc
Confidence             00   0001111124667889999999999999999888999999999999754

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=100.00  E-value=5.1e-38  Score=283.65  Aligned_cols=247  Identities=22%  Similarity=0.245  Sum_probs=185.7

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhh--------cCCCCeEEEEecCCCHHHHHHHHHHHH
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLAST--------LAPAPVTFVHCDVSLEEDIENLINSTV  101 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~--------~~~~~v~~~~~D~~d~~~i~~~~~~~~  101 (305)
                      ++|++|||||++|||+++++.|+++|++|+++.|+....+...+.        ..+.++.++.+|++|.++++++++++.
T Consensus         1 ~~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   80 (327)
T 1jtv_A            1 ARTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVT   80 (327)
T ss_dssp             CCEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHh
Confidence            478999999999999999999999999988887654333222111        123568999999999999999998873


Q ss_pred             HhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCcc
Q 021960          102 SRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHA  181 (305)
Q Consensus       102 ~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~  181 (305)
                        ++++|+||||||....    .++.+.+.++|++.+++|+.+++++++.++|.|.+++.++||++||..+..+.++...
T Consensus        81 --~g~iD~lVnnAG~~~~----~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~~~~~~~~  154 (327)
T 1jtv_A           81 --EGRVDVLVCNAGLGLL----GPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDV  154 (327)
T ss_dssp             --TSCCSEEEECCCCCCC----SCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTTCHH
T ss_pred             --cCCCCEEEECCCcCCC----CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCcccccCCCCChH
Confidence              5789999999997543    5677889999999999999999999999999998888899999999999999999999


Q ss_pred             chhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCC
Q 021960          182 YTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLK  261 (305)
Q Consensus       182 Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (305)
                      |++||+++++|+++++.|++++||+|++|+||+++|+|.......    ... ....   ...+..+.+..+......+.
T Consensus       155 Y~aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~----~~~-~~~~---~~~~~~~~~~~~~~~~~~~~  226 (327)
T 1jtv_A          155 YCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGS----PEE-VLDR---TDIHTFHRFYQYLAHSKQVF  226 (327)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CC----HHH-HHHT---SCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChHHhhhhhc----chh-hhcc---CCHHHHHHHHHHHHHHHHhh
Confidence            999999999999999999999999999999999999996442211    000 0000   00111111111111000111


Q ss_pred             CCC-CCHHHHHHHHHHhccC---CCCceeccEE
Q 021960          262 GTT-LRSKDIAEAALYLASD---ESRYVSGHNL  290 (305)
Q Consensus       262 ~~~-~~~~dva~~v~~l~s~---~~~~~tG~~i  290 (305)
                      ++. .+|+|+|+.++|+++.   ..+|++|+.+
T Consensus       227 ~~~~~~pedvA~~i~~l~~~~~~~~~~~tg~~~  259 (327)
T 1jtv_A          227 REAAQNPEEVAEVFLTALRAPKPTLRYFTTERF  259 (327)
T ss_dssp             HHHCBCHHHHHHHHHHHHHCSSCCSEEESCSTT
T ss_pred             hhcCCCHHHHHHHHHHHHcCCCCCeEEEeCchH
Confidence            233 4899999999999874   4678998764

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=100.00  E-value=3.4e-38  Score=273.42  Aligned_cols=225  Identities=25%  Similarity=0.262  Sum_probs=160.5

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRL  107 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~i  107 (305)
                      ++++|++|||||++|||+++|+.|++ |+.|++++|+....+.+.+   ..++.++.+|+++.++ .+.+.+..+.++++
T Consensus         2 ~l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~---~~~~~~~~~D~~~~~~-~~~~~~~~~~~~~i   76 (245)
T 3e9n_A            2 SLKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAE---IEGVEPIESDIVKEVL-EEGGVDKLKNLDHV   76 (245)
T ss_dssp             ----CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHT---STTEEEEECCHHHHHH-TSSSCGGGTTCSCC
T ss_pred             CCCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHh---hcCCcceecccchHHH-HHHHHHHHHhcCCC
Confidence            46899999999999999999999988 8999999998776655543   2458899999998776 44444555677899


Q ss_pred             cEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhHH
Q 021960          108 DILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKH  187 (305)
Q Consensus       108 d~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKa  187 (305)
                      |+||||||....    .++.+.+.++|++.+++|+.+++++++.+++.|.+++ ++||++||..+..+.++...|++||+
T Consensus        77 d~lv~~Ag~~~~----~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asK~  151 (245)
T 3e9n_A           77 DTLVHAAAVARD----TTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAAS-GCVIYINSGAGNGPHPGNTIYAASKH  151 (245)
T ss_dssp             SEEEECC--------------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEC----------CHHHHHHHH
T ss_pred             CEEEECCCcCCC----CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEcCcccccCCCCchHHHHHHH
Confidence            999999998644    5677789999999999999999999999999997755 89999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCCH
Q 021960          188 AIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRS  267 (305)
Q Consensus       188 a~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (305)
                      ++++|+++++.|++++||+|++|+||+++|+|.........                          .  ..+.+++++|
T Consensus       152 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~--------------------------~--~~~~~~~~~p  203 (245)
T 3e9n_A          152 ALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQGLMDSQG--------------------------T--NFRPEIYIEP  203 (245)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEECCC--------------------------------------------CCGGGSCH
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEecCCccCchhhhhhhhhh--------------------------c--ccccccCCCH
Confidence            99999999999999999999999999999998654332200                          0  1234567899


Q ss_pred             HHHHHHHHHhccCCCCceeccEEEec
Q 021960          268 KDIAEAALYLASDESRYVSGHNLVVD  293 (305)
Q Consensus       268 ~dva~~v~~l~s~~~~~~tG~~i~id  293 (305)
                      +|+|+.++||++...   +++++++|
T Consensus       204 ~dvA~~i~~l~~~~~---~~~~~~i~  226 (245)
T 3e9n_A          204 KEIANAIRFVIDAGE---TTQITNVD  226 (245)
T ss_dssp             HHHHHHHHHHHTSCT---TEEEEEEE
T ss_pred             HHHHHHHHHHHcCCC---ccceeeeE
Confidence            999999999998764   34444443

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.5e-36  Score=272.22  Aligned_cols=256  Identities=20%  Similarity=0.219  Sum_probs=186.0

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCc-----chhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHH
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVED-----TLGSVLASTL--APAPVTFVHCDVSLEEDIENLINST  100 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~-----~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~  100 (305)
                      .|++|++|||||++|||+++|+.|+++|++|+++.|+.     ...+.+.+..  .+.++.++.+|++|.++++++++++
T Consensus         2 ~m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~   81 (324)
T 3u9l_A            2 VMSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQI   81 (324)
T ss_dssp             ---CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHH
Confidence            46789999999999999999999999999999887752     2222222221  2456999999999999999999999


Q ss_pred             HHhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEeccccccc-CCCCC
Q 021960          101 VSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVM-GGLGP  179 (305)
Q Consensus       101 ~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~-~~~~~  179 (305)
                      .+.+|++|+||||||....    .++.+.+.++|++.+++|+.++++++++++|.|.+++.|+||++||.++.. +.++.
T Consensus        82 ~~~~g~iD~lVnnAG~~~~----~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~~~~~~~  157 (324)
T 3u9l_A           82 IGEDGRIDVLIHNAGHMVF----GPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGGTPPYL  157 (324)
T ss_dssp             HHHHSCCSEEEECCCCCBC----SCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCCSSC
T ss_pred             HHHcCCCCEEEECCCcCCC----CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhccCCCCcc
Confidence            9999999999999998643    678889999999999999999999999999999988899999999999885 45678


Q ss_pred             ccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhh-hhhccCCCcHHHHHHHHHHHhhcC
Q 021960          180 HAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEED-ECMNFGIPSQKEVRKMEEFVSGLG  258 (305)
Q Consensus       180 ~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  258 (305)
                      ..|++||+++++|+++++.|++++||+|++|+||+++|++............... .....  +.....+.+......  
T Consensus       158 ~~Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~--  233 (324)
T 3u9l_A          158 APYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTNHFAHSGVPDDHARQAEYEAG--PNAGLGEEIKKAFAA--  233 (324)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC---------CBCCSCHHHHHHHHHT--TTTTHHHHHHHHHHH--
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCchhhcccCCchHHHHHHhhccc--cccCCHHHHHHHHHH--
Confidence            8999999999999999999999999999999999999887432211111111110 00000  000011111111111  


Q ss_pred             CCCCCCCCHHHHHHHHHHhccCCCCceeccEEEec
Q 021960          259 NLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVD  293 (305)
Q Consensus       259 ~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~id  293 (305)
                       ......+|+++|+.++.++..... .....+.++
T Consensus       234 -l~~~~~~p~~vA~aiv~~~~~~~~-~~~~~~~~g  266 (324)
T 3u9l_A          234 -IVPPDADVSLVADAIVRVVGTASG-KRPFRVHVD  266 (324)
T ss_dssp             -TSCTTCCTHHHHHHHHHHHTSCTT-CCCSEEEEC
T ss_pred             -hcCCCCCHHHHHHHHHHHhcCCCC-CCCeEEEeC
Confidence             123346899999999999876521 224455554

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=9.3e-37  Score=268.52  Aligned_cols=221  Identities=27%  Similarity=0.337  Sum_probs=190.3

Q ss_pred             CCCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHH
Q 021960           25 SHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVS  102 (305)
Q Consensus        25 ~~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~  102 (305)
                      ...++++|++|||||+||||+++++.|+++|++|++++|+....+...+.+  .+.++.++.+|++|.++++++++++.+
T Consensus        25 ~~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  104 (272)
T 1yb1_A           25 RRKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKA  104 (272)
T ss_dssp             CCCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHH
Confidence            345789999999999999999999999999999999999876555443332  245689999999999999999999999


Q ss_pred             hcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccc
Q 021960          103 RYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAY  182 (305)
Q Consensus       103 ~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y  182 (305)
                      .++++|+||||||....    .++.+.+.+++++.+++|+.+++++++.+++.|.+++.++||++||..+..+.++...|
T Consensus       105 ~~g~iD~li~~Ag~~~~----~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y  180 (272)
T 1yb1_A          105 EIGDVSILVNNAGVVYT----SDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAY  180 (272)
T ss_dssp             HTCCCSEEEECCCCCCC----CCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHHHHHH
T ss_pred             HCCCCcEEEECCCcCCC----cchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCCchhH
Confidence            99999999999997643    45667788999999999999999999999999988888999999999999888888999


Q ss_pred             hhhHHHHHHHHHHHHHHHC---cCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCC
Q 021960          183 TASKHAIVGLTKNAACELG---RYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGN  259 (305)
Q Consensus       183 ~~sKaa~~~~~~~la~e~~---~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (305)
                      +++|++++.++++++.|+.   ++||+|++|+||+++|+|....                     .             .
T Consensus       181 ~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~~~---------------------~-------------~  226 (272)
T 1yb1_A          181 CSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNP---------------------S-------------T  226 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCT---------------------H-------------H
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCccccc---------------------c-------------c
Confidence            9999999999999999996   6799999999999999983210                     0             0


Q ss_pred             CCCCCCCHHHHHHHHHHhccCCCC
Q 021960          260 LKGTTLRSKDIAEAALYLASDESR  283 (305)
Q Consensus       260 ~~~~~~~~~dva~~v~~l~s~~~~  283 (305)
                      +.+++++|+|+|+.+++++.+...
T Consensus       227 ~~~~~~~~~dva~~i~~~~~~~~~  250 (272)
T 1yb1_A          227 SLGPTLEPEEVVNRLMHGILTEQK  250 (272)
T ss_dssp             HHCCCCCHHHHHHHHHHHHHTTCS
T ss_pred             cccCCCCHHHHHHHHHHHHHcCCC
Confidence            124678999999999999987644

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=100.00  E-value=8.2e-36  Score=266.46  Aligned_cols=222  Identities=24%  Similarity=0.297  Sum_probs=182.5

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc---CCCCeEEEEecCCCH-HHHHHHHHHHHHh
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL---APAPVTFVHCDVSLE-EDIENLINSTVSR  103 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~---~~~~v~~~~~D~~d~-~~i~~~~~~~~~~  103 (305)
                      .+++|++|||||++|||+++|+.|+++|++|++++|+....+...+.+   .+.++.++.+|++|. ++++.+++.+.+.
T Consensus         9 ~~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~   88 (311)
T 3o26_A            9 VTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTH   88 (311)
T ss_dssp             ---CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             cCCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHh
Confidence            457899999999999999999999999999999999877655444333   235799999999997 9999999999999


Q ss_pred             cCCccEEEEcCCCCCCCC--------------------------CCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Q 021960          104 YGRLDILYNNAGVLGNQR--------------------------KHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMI  157 (305)
Q Consensus       104 ~g~id~li~nag~~~~~~--------------------------~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~  157 (305)
                      ++++|+||||||......                          ....+.+.+.+.+++.+++|+.+++++++.++|.|.
T Consensus        89 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~  168 (311)
T 3o26_A           89 FGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQ  168 (311)
T ss_dssp             HSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhHhhc
Confidence            999999999999863210                          012345678999999999999999999999999998


Q ss_pred             cCCCCEEEEecccccccCC-------------------------------------------CCCccchhhHHHHHHHHH
Q 021960          158 NRGGGCIISTASVAGVMGG-------------------------------------------LGPHAYTASKHAIVGLTK  194 (305)
Q Consensus       158 ~~~~~~iv~isS~~~~~~~-------------------------------------------~~~~~Y~~sKaa~~~~~~  194 (305)
                      +++.++||++||..+..+.                                           ++...|++||+++++|++
T Consensus       169 ~~~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~  248 (311)
T 3o26_A          169 LSDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAYTR  248 (311)
T ss_dssp             TSSSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHHHHHHHHH
T ss_pred             cCCCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHHHHHHHHH
Confidence            8888999999999887653                                           355789999999999999


Q ss_pred             HHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHH
Q 021960          195 NAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSKDIAEAA  274 (305)
Q Consensus       195 ~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v  274 (305)
                      +++.|+.  +|+||+|+||+|+|+|....                                       ...++++.++.+
T Consensus       249 ~la~e~~--~i~v~~v~PG~v~T~~~~~~---------------------------------------~~~~~~~~a~~~  287 (311)
T 3o26_A          249 VLANKIP--KFQVNCVCPGLVKTEMNYGI---------------------------------------GNYTAEEGAEHV  287 (311)
T ss_dssp             HHHHHCT--TSEEEEECCCSBCSGGGTTC---------------------------------------CSBCHHHHHHHH
T ss_pred             HHHhhcC--CceEEEecCCceecCCcCCC---------------------------------------CCCCHHHHHHHH
Confidence            9999985  49999999999999985321                                       123788999999


Q ss_pred             HHhccCCCCceeccEE
Q 021960          275 LYLASDESRYVSGHNL  290 (305)
Q Consensus       275 ~~l~s~~~~~~tG~~i  290 (305)
                      ++++.......+|..+
T Consensus       288 ~~~~~~~~~~~~g~~~  303 (311)
T 3o26_A          288 VRIALFPDDGPSGFFY  303 (311)
T ss_dssp             HHHHTCCSSCCCSCEE
T ss_pred             HHHHhCCCCCCCceEe
Confidence            9988765444455444

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=100.00  E-value=2.1e-36  Score=279.13  Aligned_cols=242  Identities=12%  Similarity=0.025  Sum_probs=192.4

Q ss_pred             CCCCEEEEecCCCchHHH--HHHHHHHcCCeEEEEecCcchh------------hhHhhh--cCCCCeEEEEecCCCHHH
Q 021960           29 LEGKVAIITGGARGIGEA--AVRLFARHGAKVVIADVEDTLG------------SVLAST--LAPAPVTFVHCDVSLEED   92 (305)
Q Consensus        29 l~~k~vlVtGas~giG~~--ia~~l~~~g~~vv~~~r~~~~~------------~~~~~~--~~~~~v~~~~~D~~d~~~   92 (305)
                      ..+|++|||||++|||++  +++.|+++|++|++++|+....            +.+.+.  ..+.++..+.+|++|.++
T Consensus        58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~~  137 (418)
T 4eue_A           58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNET  137 (418)
T ss_dssp             CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHHH
Confidence            579999999999999999  9999999999999998864431            222211  135568899999999999


Q ss_pred             HHHHHHHHHHhcCCccEEEEcCCCCCCC---------CCCCcc---------------------cCCCHHHHHHHHHHHh
Q 021960           93 IENLINSTVSRYGRLDILYNNAGVLGNQ---------RKHKSI---------------------IDFDADEFDNVMRVNV  142 (305)
Q Consensus        93 i~~~~~~~~~~~g~id~li~nag~~~~~---------~~~~~~---------------------~~~~~~~~~~~~~~n~  142 (305)
                      ++++++++.+.+|+||+||||||.....         ....++                     .+.+.++|++.+++|.
T Consensus       138 v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~vn~  217 (418)
T 4eue_A          138 KDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKVMG  217 (418)
T ss_dssp             HHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHhh
Confidence            9999999999999999999999974100         000222                     4579999999999999


Q ss_pred             HHHH-HHHHHHHHHHHcCCCCEEEEecccccccCCCCC--ccchhhHHHHHHHHHHHHHHHCc-CCcEEEEEeCCccccc
Q 021960          143 KGMA-LGIKHAARVMINRGGGCIISTASVAGVMGGLGP--HAYTASKHAIVGLTKNAACELGR-YGIRVNCISPFGVATS  218 (305)
Q Consensus       143 ~~~~-~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~--~~Y~~sKaa~~~~~~~la~e~~~-~~i~v~~v~PG~v~T~  218 (305)
                      .+.+ .+++.+.+.+...++|+||++||..+..+.+.+  +.|++||+|+++|+++|+.|+++ +||+||+|+||+++|+
T Consensus       218 ~~~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~~~~p~~~~~aY~ASKaAL~~ltrsLA~ELa~~~GIrVN~V~PG~v~T~  297 (418)
T 4eue_A          218 GEDWQEWCEELLYEDCFSDKATTIAYSYIGSPRTYKIYREGTIGIAKKDLEDKAKLINEKLNRVIGGRAFVSVNKALVTK  297 (418)
T ss_dssp             SHHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHHHHHHSCEEEEEECCCCCCH
T ss_pred             HHHHHHHHHHHHHHhhhcCCcEEEEEeCchhcCCCCccccHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEECCcCcCh
Confidence            9887 777777765544556899999999999998887  99999999999999999999999 9999999999999999


Q ss_pred             cchhcccCCCCCchhhhhhccCCCcH-HHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCcc
Q 021960          219 MLVNAWRNSGDGEEEDECMNFGIPSQ-KEVRKMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT  297 (305)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~  297 (305)
                      +....                  |.. .....+..       +.++.+++|+|++.+.||+++.  ..+|+.+.+|||..
T Consensus       298 ~s~~i------------------p~~p~y~~~~~~-------~mk~~G~~E~v~e~~~~L~sd~--~~~g~~~~~D~~~~  350 (418)
T 4eue_A          298 ASAYI------------------PTFPLYAAILYK-------VMKEKNIHENCIMQIERMFSEK--IYSNEKIQFDDKGR  350 (418)
T ss_dssp             HHHTS------------------TTHHHHHHHHHH-------HHHHTTCCCCHHHHHHHHHHHT--TSSSSCCCCCTTSC
T ss_pred             hhhcC------------------CCCcHHHHHHHH-------HHhhcCChHHHHHHHHHHhhcc--ccCCCccccCCCce
Confidence            85432                  111 11111111       2345578999999999999984  67899999998643

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=100.00  E-value=3.1e-35  Score=258.04  Aligned_cols=219  Identities=25%  Similarity=0.256  Sum_probs=182.8

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHH-cCCeEEEEecCcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhcCC
Q 021960           30 EGKVAIITGGARGIGEAAVRLFAR-HGAKVVIADVEDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRYGR  106 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~-~g~~vv~~~r~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~  106 (305)
                      ++|++|||||+||||+++++.|++ +|++|++++|+....+...+.+  .+.++.++.+|++|.++++++++++.+.+++
T Consensus         3 ~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~   82 (276)
T 1wma_A            3 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGG   82 (276)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            579999999999999999999999 9999999999866554433332  2456889999999999999999999999999


Q ss_pred             ccEEEEcCCCCCCCCCCCcccCCC-HHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCC---------
Q 021960          107 LDILYNNAGVLGNQRKHKSIIDFD-ADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGG---------  176 (305)
Q Consensus       107 id~li~nag~~~~~~~~~~~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~---------  176 (305)
                      +|+||||||....    . ..+.+ .+++++.+++|+.+++++++.+++.|.+  .++||++||..+..+.         
T Consensus        83 id~li~~Ag~~~~----~-~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~~sS~~~~~~~~~~~~~~~~  155 (276)
T 1wma_A           83 LDVLVNNAGIAFK----V-ADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKP--QGRVVNVSSIMSVRALKSCSPELQQ  155 (276)
T ss_dssp             EEEEEECCCCCCC----T-TCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCHHHHHHHHTSCHHHHH
T ss_pred             CCEEEECCccccc----C-CCccccHHHHHhhhheeeeeHHHHHHHHHHhhCC--CCEEEEECChhhhcccccCChhHHh
Confidence            9999999997643    1 22334 5889999999999999999999998854  4799999998776320         


Q ss_pred             --------------------------------CCCccchhhHHHHHHHHHHHHHHHCc----CCcEEEEEeCCccccccc
Q 021960          177 --------------------------------LGPHAYTASKHAIVGLTKNAACELGR----YGIRVNCISPFGVATSML  220 (305)
Q Consensus       177 --------------------------------~~~~~Y~~sKaa~~~~~~~la~e~~~----~~i~v~~v~PG~v~T~~~  220 (305)
                                                      .....|+++|++++.|++.++.++++    +||+|++|+||+++|+|.
T Consensus       156 ~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~~  235 (276)
T 1wma_A          156 KFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMA  235 (276)
T ss_dssp             HHHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTT
T ss_pred             hccccccchhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCcC
Confidence                                            01378999999999999999999987    799999999999999984


Q ss_pred             hhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHHhccCC--CCceeccEEEecCC
Q 021960          221 VNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSKDIAEAALYLASDE--SRYVSGHNLVVDGG  295 (305)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~--~~~~tG~~i~idgG  295 (305)
                      ..                                       ....+|+|+|+.++||++..  .++++|++|. |++
T Consensus       236 ~~---------------------------------------~~~~~~~~~a~~~~~l~~~~~~~~~~~G~~~~-~~~  272 (276)
T 1wma_A          236 GP---------------------------------------KATKSPEEGAETPVYLALLPPDAEGPHGQFVS-EKR  272 (276)
T ss_dssp             CT---------------------------------------TCSBCHHHHTHHHHHHHSCCTTCCCCCSCEEE-TTE
T ss_pred             Cc---------------------------------------cccCChhHhhhhHhhhhcCcccccccCceEec-cCc
Confidence            21                                       23568999999999999854  4689999987 655

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=100.00  E-value=1.2e-34  Score=256.80  Aligned_cols=217  Identities=20%  Similarity=0.204  Sum_probs=182.7

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc---CCCCeEEEEecCCCHHHHHHHHHHHHHh
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL---APAPVTFVHCDVSLEEDIENLINSTVSR  103 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~---~~~~v~~~~~D~~d~~~i~~~~~~~~~~  103 (305)
                      ..+++|++|||||+||||+++++.|+++|++|++++|+....+...+.+   ...++.++.+|++|.++++++++++.+.
T Consensus        24 ~~~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~  103 (286)
T 1xu9_A           24 EMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKL  103 (286)
T ss_dssp             GGGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             hhcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999876655443332   2336889999999999999999999999


Q ss_pred             cCCccEEEEc-CCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccc
Q 021960          104 YGRLDILYNN-AGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAY  182 (305)
Q Consensus       104 ~g~id~li~n-ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y  182 (305)
                      ++++|+|||| +|...     ..+.+.+.+++++.+++|+.+++++++.+++.|.++ .++||++||.++..+.++...|
T Consensus       104 ~g~iD~li~naag~~~-----~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y  177 (286)
T 1xu9_A          104 MGGLDMLILNHITNTS-----LNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS-NGSIVVVSSLAGKVAYPMVAAY  177 (286)
T ss_dssp             HTSCSEEEECCCCCCC-----CCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEEGGGTSCCTTCHHH
T ss_pred             cCCCCEEEECCccCCC-----CccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHC-CCEEEEECCcccccCCCCccHH
Confidence            9999999999 56532     234556899999999999999999999999988654 5899999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHH--CcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCC
Q 021960          183 TASKHAIVGLTKNAACEL--GRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNL  260 (305)
Q Consensus       183 ~~sKaa~~~~~~~la~e~--~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (305)
                      ++||++++.++++++.|+  ...+|++++|+||+++|++.......                                ..
T Consensus       178 ~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~--------------------------------~~  225 (286)
T 1xu9_A          178 SASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSG--------------------------------IV  225 (286)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHHSCG--------------------------------GG
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChhHHHhccc--------------------------------cc
Confidence            999999999999999999  57899999999999999985432110                                00


Q ss_pred             CCCCCCHHHHHHHHHHhccCC
Q 021960          261 KGTTLRSKDIAEAALYLASDE  281 (305)
Q Consensus       261 ~~~~~~~~dva~~v~~l~s~~  281 (305)
                      .....+|+|+|+.++..+...
T Consensus       226 ~~~~~~~~~vA~~i~~~~~~~  246 (286)
T 1xu9_A          226 HMQAAPKEECALEIIKGGALR  246 (286)
T ss_dssp             GGGCBCHHHHHHHHHHHHHTT
T ss_pred             cCCCCCHHHHHHHHHHHHhcC
Confidence            123468999999999988654

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=100.00  E-value=2.9e-34  Score=298.97  Aligned_cols=241  Identities=20%  Similarity=0.221  Sum_probs=193.8

Q ss_pred             CCCCCCCEEEEecCCCc-hHHHHHHHHHHcCCeEEEE-ecCcchhhhHhh----hc--CCCCeEEEEecCCCHHHHHHHH
Q 021960           26 HRRLEGKVAIITGGARG-IGEAAVRLFARHGAKVVIA-DVEDTLGSVLAS----TL--APAPVTFVHCDVSLEEDIENLI   97 (305)
Q Consensus        26 ~~~l~~k~vlVtGas~g-iG~~ia~~l~~~g~~vv~~-~r~~~~~~~~~~----~~--~~~~v~~~~~D~~d~~~i~~~~   97 (305)
                      .++++||++|||||++| ||+++|+.|+++|++|+++ +|+....+...+    .+  .+.++.++.||++|.+++++++
T Consensus       670 ~m~l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv  749 (1887)
T 2uv8_A          670 GVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALI  749 (1887)
T ss_dssp             CBCCTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHH
T ss_pred             cCCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHH
Confidence            34688999999999998 9999999999999999998 465544433222    22  2456899999999999999999


Q ss_pred             HHHHHh-----cC-CccEEEEcCCCCCCCCCCC-cccCCC--HHHHHHHHHHHhHHHHHHHHHH--HHHHHcCCCCEEEE
Q 021960           98 NSTVSR-----YG-RLDILYNNAGVLGNQRKHK-SIIDFD--ADEFDNVMRVNVKGMALGIKHA--ARVMINRGGGCIIS  166 (305)
Q Consensus        98 ~~~~~~-----~g-~id~li~nag~~~~~~~~~-~~~~~~--~~~~~~~~~~n~~~~~~l~~~~--~~~~~~~~~~~iv~  166 (305)
                      +++.+.     +| +||+||||||....    . ++.+.+  .++|++++++|+.+++++++.+  ++.|.+++.++||+
T Consensus       750 ~~i~~~~~~~G~G~~LDiLVNNAGi~~~----~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVn  825 (1887)
T 2uv8_A          750 EFIYDTEKNGGLGWDLDAIIPFAAIPEQ----GIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILP  825 (1887)
T ss_dssp             HHHHSCTTTTSCCCCCSEEEECCCCCCC----SBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEE
T ss_pred             HHHHHhccccccCCCCeEEEECCCcCCC----CCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEE
Confidence            999988     66 89999999998643    4 677788  8999999999999999999987  67787766789999


Q ss_pred             ecccccccCCCCCccchhhHHHHHHH-HHHHHHHHCcCCcEEEEEeCCccc-cccchhcccCCCCCchhhhhhccCCCcH
Q 021960          167 TASVAGVMGGLGPHAYTASKHAIVGL-TKNAACELGRYGIRVNCISPFGVA-TSMLVNAWRNSGDGEEEDECMNFGIPSQ  244 (305)
Q Consensus       167 isS~~~~~~~~~~~~Y~~sKaa~~~~-~~~la~e~~~~~i~v~~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (305)
                      +||..+..+  +...|++||+++++| .+.++.+++++ |+||+|+||+++ |+|....  .   .            ..
T Consensus       826 ISS~ag~~g--g~~aYaASKAAL~~Lttr~lA~ela~~-IrVNaV~PG~V~tT~m~~~~--~---~------------~~  885 (1887)
T 2uv8_A          826 MSPNHGTFG--GDGMYSESKLSLETLFNRWHSESWANQ-LTVCGAIIGWTRGTGLMSAN--N---I------------IA  885 (1887)
T ss_dssp             ECSCTTCSS--CBTTHHHHHHHGGGHHHHHHHSSCTTT-EEEEEEEECCEECC-----C--C---T------------TH
T ss_pred             EcChHhccC--CCchHHHHHHHHHHHHHHHHHHHhCCC-eEEEEEEecccccccccccc--h---h------------HH
Confidence            999999887  678999999999999 99999999887 999999999999 7874320  0   0            00


Q ss_pred             HHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHHhccCC-CCceeccEEEec--CCccccc
Q 021960          245 KEVRKMEEFVSGLGNLKGTTLRSKDIAEAALYLASDE-SRYVSGHNLVVD--GGVTTSR  300 (305)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~-~~~~tG~~i~id--gG~~~~~  300 (305)
                      .       ....  .+. +..+|+|+|+.++||+++. .+++||+.|.+|  ||+....
T Consensus       886 ~-------~~~~--~pl-r~~sPEEVA~avlfLaSd~~as~iTGq~I~VDVDGG~~~~~  934 (1887)
T 2uv8_A          886 E-------GIEK--MGV-RTFSQKEMAFNLLGLLTPEVVELCQKSPVMADLNGGLQFVP  934 (1887)
T ss_dssp             H-------HHHT--TSC-CCEEHHHHHHHHHGGGSHHHHHHHHHSCEEEEESCSTTTSS
T ss_pred             H-------HHHh--cCC-CCCCHHHHHHHHHHHhCCCccccccCcEEEEECCCCeeccc
Confidence            1       0111  222 5569999999999999988 789999999875  9976543

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=100.00  E-value=1.9e-33  Score=236.23  Aligned_cols=198  Identities=16%  Similarity=0.149  Sum_probs=172.3

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEEEE
Q 021960           33 VAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILYN  112 (305)
Q Consensus        33 ~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~li~  112 (305)
                      ++|||||+||||++++++|+ +|++|++++|+..               .+.+|++|.++++++++++    +++|+|||
T Consensus         5 ~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~---------------~~~~D~~~~~~~~~~~~~~----~~~d~vi~   64 (202)
T 3d7l_A            5 KILLIGASGTLGSAVKERLE-KKAEVITAGRHSG---------------DVTVDITNIDSIKKMYEQV----GKVDAIVS   64 (202)
T ss_dssp             EEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS---------------SEECCTTCHHHHHHHHHHH----CCEEEEEE
T ss_pred             EEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc---------------ceeeecCCHHHHHHHHHHh----CCCCEEEE
Confidence            79999999999999999999 9999999998753               3679999999999988765    78999999


Q ss_pred             cCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhHHHHHHH
Q 021960          113 NAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGL  192 (305)
Q Consensus       113 nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~  192 (305)
                      |||....    .++.+.+.+++++.+++|+.+++++++.+.+.|.+  +++||++||..+..+.++...|+++|++++.+
T Consensus        65 ~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~iv~~sS~~~~~~~~~~~~Y~~sK~~~~~~  138 (202)
T 3d7l_A           65 ATGSATF----SPLTELTPEKNAVTISSKLGGQINLVLLGIDSLND--KGSFTLTTGIMMEDPIVQGASAAMANGAVTAF  138 (202)
T ss_dssp             CCCCCCC----CCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEE--EEEEEEECCGGGTSCCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCC----CChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhcc--CCEEEEEcchhhcCCCCccHHHHHHHHHHHHH
Confidence            9997543    56778899999999999999999999999988744  38999999999999988999999999999999


Q ss_pred             HHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 021960          193 TKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSKDIAE  272 (305)
Q Consensus       193 ~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  272 (305)
                      ++.++.|+ ++|+++++|+||++.|++...  .                             .  ..+..++++++|+|+
T Consensus       139 ~~~~~~e~-~~gi~v~~v~pg~v~~~~~~~--~-----------------------------~--~~~~~~~~~~~dva~  184 (202)
T 3d7l_A          139 AKSAAIEM-PRGIRINTVSPNVLEESWDKL--E-----------------------------P--FFEGFLPVPAAKVAR  184 (202)
T ss_dssp             HHHHTTSC-STTCEEEEEEECCBGGGHHHH--G-----------------------------G--GSTTCCCBCHHHHHH
T ss_pred             HHHHHHHc-cCCeEEEEEecCccCCchhhh--h-----------------------------h--hccccCCCCHHHHHH
Confidence            99999998 789999999999999987321  0                             0  123456789999999


Q ss_pred             HHHHhccCCCCceeccEEEec
Q 021960          273 AALYLASDESRYVSGHNLVVD  293 (305)
Q Consensus       273 ~v~~l~s~~~~~~tG~~i~id  293 (305)
                      .++++++   ++++|++|++|
T Consensus       185 ~~~~~~~---~~~~G~~~~vd  202 (202)
T 3d7l_A          185 AFEKSVF---GAQTGESYQVY  202 (202)
T ss_dssp             HHHHHHH---SCCCSCEEEEC
T ss_pred             HHHHhhh---ccccCceEecC
Confidence            9999884   46899999987

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.7e-34  Score=290.71  Aligned_cols=244  Identities=20%  Similarity=0.231  Sum_probs=196.8

Q ss_pred             CCCCCCCCCCEEEEecCCCc-hHHHHHHHHHHcCCeEEEE-ecCcchhhhHhhhc------CCCCeEEEEecCCCHHHHH
Q 021960           23 PPSHRRLEGKVAIITGGARG-IGEAAVRLFARHGAKVVIA-DVEDTLGSVLASTL------APAPVTFVHCDVSLEEDIE   94 (305)
Q Consensus        23 ~~~~~~l~~k~vlVtGas~g-iG~~ia~~l~~~g~~vv~~-~r~~~~~~~~~~~~------~~~~v~~~~~D~~d~~~i~   94 (305)
                      ....+++++|++|||||++| ||+++|+.|+++|++|+++ +|+....+...+.+      .+.++.++.+|++|.++++
T Consensus       468 a~~~msL~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVe  547 (1688)
T 2pff_A          468 XXXXVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVE  547 (1688)
T ss_dssp             SSSCCCCCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHH
T ss_pred             cccccccCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHH
Confidence            33445688999999999998 9999999999999999998 56554443332222      1446889999999999999


Q ss_pred             HHHHHHHHh-----cC-CccEEEEcCCCCCCCCCCC-cccCCC--HHHHHHHHHHHhHHHHHHHHHH--HHHHHcCCCCE
Q 021960           95 NLINSTVSR-----YG-RLDILYNNAGVLGNQRKHK-SIIDFD--ADEFDNVMRVNVKGMALGIKHA--ARVMINRGGGC  163 (305)
Q Consensus        95 ~~~~~~~~~-----~g-~id~li~nag~~~~~~~~~-~~~~~~--~~~~~~~~~~n~~~~~~l~~~~--~~~~~~~~~~~  163 (305)
                      ++++++.+.     +| +||+||||||....    . ++.+.+  .++|++.+++|+.+++.+++.+  ++.|.+++.++
T Consensus       548 aLVe~I~e~~~~~GfG~~IDILVNNAGI~~~----g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGr  623 (1688)
T 2pff_A          548 ALIEFIYDTEKNGGLGWDLDAIIPFAAIPEQ----GIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQV  623 (1688)
T ss_dssp             HHHHHHHSCTTSSSCCCCCCEEECCCCCCCC----SBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEE
T ss_pred             HHHHHHHHhccccccCCCCeEEEECCCcCCC----CCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCE
Confidence            999999988     77 89999999997643    4 667777  8999999999999999999998  78887777789


Q ss_pred             EEEecccccccCCCCCccchhhHHHHHHH-HHHHHHHHCcCCcEEEEEeCCccc-cccchhcccCCCCCchhhhhhccCC
Q 021960          164 IISTASVAGVMGGLGPHAYTASKHAIVGL-TKNAACELGRYGIRVNCISPFGVA-TSMLVNAWRNSGDGEEEDECMNFGI  241 (305)
Q Consensus       164 iv~isS~~~~~~~~~~~~Y~~sKaa~~~~-~~~la~e~~~~~i~v~~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~~~  241 (305)
                      ||++||.++..+  +...|++||+++++| .+.++.++++. |+||+|+||+++ |+|....  .   ...         
T Consensus       624 IVnISSiAG~~G--g~saYaASKAAL~aLttrsLAeEla~~-IRVNaVaPG~V~TT~M~~~~--e---~~~---------  686 (1688)
T 2pff_A          624 ILPMSPNHGTFG--GDGMYSESKLSLETLFNRWHSESWANQ-LTVCGAIIGWTRGTGLMSAN--N---IIA---------  686 (1688)
T ss_dssp             CCCCCSCTTTSS--CBTTHHHHHHHHTHHHHHTTTSSCTTT-EECCCCCCCCCCCCSSSCTT--T---TCS---------
T ss_pred             EEEEEChHhccC--CchHHHHHHHHHHHHHHHHHHHHcCCC-eEEEEEEECcCcCCcccCCc--h---HHH---------
Confidence            999999998877  678999999999999 78888888877 999999999999 7874320  0   000         


Q ss_pred             CcHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHHhccCC-CCceeccEEEec--CCccccc
Q 021960          242 PSQKEVRKMEEFVSGLGNLKGTTLRSKDIAEAALYLASDE-SRYVSGHNLVVD--GGVTTSR  300 (305)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~-~~~~tG~~i~id--gG~~~~~  300 (305)
                                ....  ..+. +..+|+|+|+.++||+++. .+++||+.+.+|  ||+....
T Consensus       687 ----------~~l~--~ipl-R~~sPEEVA~aIlFLaSd~sAs~ITGq~I~VDVDGG~~~~~  735 (1688)
T 2pff_A          687 ----------EGIE--KMGV-RTFSQKEMAFNLLGLLTPEVVELCQKSPVMADLNGGLQFVP  735 (1688)
T ss_dssp             ----------TTTS--SSSC-CCCCCCTTHHHHHHHTSTTHHHHHTTSCCCCCCSCSGGGSS
T ss_pred             ----------HHHH--hCCC-CCCCHHHHHHHHHHHhCCCccccccCcEEEEEcCCCeeecC
Confidence                      0000  1122 4568999999999999998 789999999876  9976543

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=100.00  E-value=1.2e-33  Score=245.25  Aligned_cols=221  Identities=26%  Similarity=0.307  Sum_probs=180.3

Q ss_pred             CEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEEE
Q 021960           32 KVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILY  111 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~li  111 (305)
                      |++|||||+||||+++++.|+++|++|++++|+......           .+.+|++|.++++++++++   .+++|+||
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----------~~~~D~~~~~~~~~~~~~~---~~~~d~vi   67 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA-----------DLSTPGGRETAVAAVLDRC---GGVLDGLV   67 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC-----------CTTSHHHHHHHHHHHHHHH---TTCCSEEE
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc-----------cccCCcccHHHHHHHHHHc---CCCccEEE
Confidence            589999999999999999999999999999997654221           1568999999998888754   36899999


Q ss_pred             EcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCC---------------
Q 021960          112 NNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGG---------------  176 (305)
Q Consensus       112 ~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~---------------  176 (305)
                      ||||....           .+.+++.+++|+.+++++++.+.+.|.+.+.++||++||..+..+.               
T Consensus        68 ~~Ag~~~~-----------~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~  136 (255)
T 2dkn_A           68 CCAGVGVT-----------AANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLAGDE  136 (255)
T ss_dssp             ECCCCCTT-----------SSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGGCHHHHHHHHTCH
T ss_pred             ECCCCCCc-----------chhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccccchhhhhcccch
Confidence            99997531           1237889999999999999999999988777999999999887654               


Q ss_pred             -----------CCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHH
Q 021960          177 -----------LGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQK  245 (305)
Q Consensus       177 -----------~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (305)
                                 ++...|+++|++++.+++.++.++.++|+++++|+||.+.|++........              . . 
T Consensus       137 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~~~~~~~--------------~-~-  200 (255)
T 2dkn_A          137 ARAIELAEQQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQASKADP--------------R-Y-  200 (255)
T ss_dssp             HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHHHHHHCT--------------T-T-
T ss_pred             hhhhhhccccCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhhhcccch--------------h-h-
Confidence                       466789999999999999999999888999999999999999865432210              0 0 


Q ss_pred             HHHHHHHHHhhc-CCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCcccc
Q 021960          246 EVRKMEEFVSGL-GNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTS  299 (305)
Q Consensus       246 ~~~~~~~~~~~~-~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~  299 (305)
                           ....... + +.+++.+++|+|+.+++++++...+++|+++++|||...+
T Consensus       201 -----~~~~~~~~~-~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~  249 (255)
T 2dkn_A          201 -----GESTRRFVA-PLGRGSEPREVAEAIAFLLGPQASFIHGSVLFVDGGMDAL  249 (255)
T ss_dssp             -----HHHHHSCCC-TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTHHHH
T ss_pred             -----HHHHHHHHH-HhcCCCCHHHHHHHHHHHhCCCcccceeeEEEecCCeEee
Confidence                 0011111 1 5567889999999999999988778999999999997653

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=100.00  E-value=8.6e-33  Score=232.86  Aligned_cols=200  Identities=23%  Similarity=0.261  Sum_probs=167.6

Q ss_pred             CEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEEE
Q 021960           32 KVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILY  111 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~li  111 (305)
                      |++|||||+||||++++++|+++  +|++++|+....+.+.+.+..   .++.+|++|.+++++++++    ++++|+||
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~~---~~~~~D~~~~~~~~~~~~~----~~~id~vi   71 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVGA---RALPADLADELEAKALLEE----AGPLDLLV   71 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHTC---EECCCCTTSHHHHHHHHHH----HCSEEEEE
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhccC---cEEEeeCCCHHHHHHHHHh----cCCCCEEE
Confidence            57999999999999999999998  999999987665555444332   7889999999999998876    67899999


Q ss_pred             EcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhHHHHHH
Q 021960          112 NNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVG  191 (305)
Q Consensus       112 ~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKaa~~~  191 (305)
                      ||||....    .++.+.+.+++++.+++|+.+++++++.+    .+++.++||++||..+..+.++...|+++|++++.
T Consensus        72 ~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  143 (207)
T 2yut_A           72 HAVGKAGR----ASVREAGRDLVEEMLAAHLLTAAFVLKHA----RFQKGARAVFFGAYPRYVQVPGFAAYAAAKGALEA  143 (207)
T ss_dssp             ECCCCCCC----BCSCC---CHHHHHHHHHHHHHHHHHHHC----CEEEEEEEEEECCCHHHHSSTTBHHHHHHHHHHHH
T ss_pred             ECCCcCCC----CChhhCCHHHHHHHHHHHhHHHHHHHHHH----HhcCCcEEEEEcChhhccCCCCcchHHHHHHHHHH
Confidence            99997643    56677788999999999999999999887    34456899999999999998999999999999999


Q ss_pred             HHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCCHHHHH
Q 021960          192 LTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSKDIA  271 (305)
Q Consensus       192 ~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva  271 (305)
                      +++.++.|++++||++++|+||++.|++....                                  ..+.+++++++|+|
T Consensus       144 ~~~~~~~~~~~~gi~v~~v~pg~v~t~~~~~~----------------------------------~~~~~~~~~~~dva  189 (207)
T 2yut_A          144 YLEAARKELLREGVHLVLVRLPAVATGLWAPL----------------------------------GGPPKGALSPEEAA  189 (207)
T ss_dssp             HHHHHHHHHHTTTCEEEEECCCCBCSGGGGGG----------------------------------TSCCTTCBCHHHHH
T ss_pred             HHHHHHHHHhhhCCEEEEEecCcccCCCcccc----------------------------------CCCCCCCCCHHHHH
Confidence            99999999999999999999999999973210                                  12346788999999


Q ss_pred             HHHHHhccCCC
Q 021960          272 EAALYLASDES  282 (305)
Q Consensus       272 ~~v~~l~s~~~  282 (305)
                      +.++++++++.
T Consensus       190 ~~~~~~~~~~~  200 (207)
T 2yut_A          190 RKVLEGLFREP  200 (207)
T ss_dssp             HHHHHHHC--C
T ss_pred             HHHHHHHhCCC
Confidence            99999998764

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=100.00  E-value=6e-33  Score=288.64  Aligned_cols=239  Identities=21%  Similarity=0.235  Sum_probs=192.4

Q ss_pred             CCCCCCEEEEecCCCc-hHHHHHHHHHHcCCeEEEEe-cCcchhhh----HhhhcC--CCCeEEEEecCCCHHHHHHHHH
Q 021960           27 RRLEGKVAIITGGARG-IGEAAVRLFARHGAKVVIAD-VEDTLGSV----LASTLA--PAPVTFVHCDVSLEEDIENLIN   98 (305)
Q Consensus        27 ~~l~~k~vlVtGas~g-iG~~ia~~l~~~g~~vv~~~-r~~~~~~~----~~~~~~--~~~v~~~~~D~~d~~~i~~~~~   98 (305)
                      ++++||++|||||++| ||+++|+.|+++|++|++++ |+......    +...+.  +.++.++.||++|.++++++++
T Consensus       648 m~L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~  727 (1878)
T 2uv9_A          648 LTFQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVN  727 (1878)
T ss_dssp             BCCTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHH
Confidence            4678999999999999 99999999999999999985 44433322    212222  4568999999999999999999


Q ss_pred             HHHHh---cC-CccEEEEcCCCCCCCCCCC-cccCCC--HHHHHHHHHHHhHHHHHHHHH--HHHHHHcCCCCEEEEecc
Q 021960           99 STVSR---YG-RLDILYNNAGVLGNQRKHK-SIIDFD--ADEFDNVMRVNVKGMALGIKH--AARVMINRGGGCIISTAS  169 (305)
Q Consensus        99 ~~~~~---~g-~id~li~nag~~~~~~~~~-~~~~~~--~~~~~~~~~~n~~~~~~l~~~--~~~~~~~~~~~~iv~isS  169 (305)
                      ++.+.   +| +||+||||||....    . ++.+.+  .++|++++++|+.+++++++.  +++.|.+++.|+||++||
T Consensus       728 ~i~~~~~~~G~~IDiLVnNAGi~~~----~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS  803 (1878)
T 2uv9_A          728 YIYDTKNGLGWDLDYVVPFAAIPEN----GREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSP  803 (1878)
T ss_dssp             HHHCSSSSCCCCCSEEEECCCCCCT----TCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECS
T ss_pred             HHHHhhcccCCCCcEEEeCcccccC----CCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcc
Confidence            99988   88 99999999997643    3 677888  899999999999999999877  677787766789999999


Q ss_pred             cccccCCCCCccchhhHHHHHHHHHHHHH-HHCcCCcEEEEEeCCccc-cccchhcccCCCCCchhhhhhccCCCcHHHH
Q 021960          170 VAGVMGGLGPHAYTASKHAIVGLTKNAAC-ELGRYGIRVNCISPFGVA-TSMLVNAWRNSGDGEEEDECMNFGIPSQKEV  247 (305)
Q Consensus       170 ~~~~~~~~~~~~Y~~sKaa~~~~~~~la~-e~~~~~i~v~~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (305)
                      .++..+  +...|+++|+++++|++.++. ++++. |+||+|+||+++ |+|....                     +. 
T Consensus       804 ~ag~~g--g~~aYaASKAAL~aLt~~laAeEla~~-IrVNaVaPG~V~gT~m~~~~---------------------~~-  858 (1878)
T 2uv9_A          804 NHGTFG--NDGLYSESKLALETLFNRWYSESWGNY-LTICGAVIGWTRGTGLMSAN---------------------NL-  858 (1878)
T ss_dssp             CSSSSS--CCSSHHHHHHHHTTHHHHHHHSTTTTT-EEEEEEEECCBCCTTSCSHH---------------------HH-
T ss_pred             hhhccC--CchHHHHHHHHHHHHHHHHHHHHcCCC-eEEEEEEecceecCcccccc---------------------hh-
Confidence            999877  577999999999999987655 47766 999999999999 9984320                     00 


Q ss_pred             HHHHHHHhhcCCCCCCCCCHHHHHHHHHHhccCCC-CceeccEEEe--cCCcccc
Q 021960          248 RKMEEFVSGLGNLKGTTLRSKDIAEAALYLASDES-RYVSGHNLVV--DGGVTTS  299 (305)
Q Consensus       248 ~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~~-~~~tG~~i~i--dgG~~~~  299 (305)
                        .......  .+. +.++|+|+|+.++||+++.. +++||+.+.+  |||+...
T Consensus       859 --~~~~~~~--~pl-r~~sPeEVA~avlfLaSd~a~s~iTGq~I~VDVDGG~~~~  908 (1878)
T 2uv9_A          859 --VAEGVEK--LGV-RTFSQQEMAFNLLGLMAPAIVNLCQSDPVFADLNGGLQFI  908 (1878)
T ss_dssp             --THHHHHT--TTC-CCBCHHHHHHHHHHHHSHHHHHHHTTSCEEEEESCSGGGC
T ss_pred             --hHHHHHh--cCC-CCCCHHHHHHHHHHHhCCcccccccCcEEEEEcCCCcccc
Confidence              0011111  222 45699999999999999887 8999999987  5997654

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.97  E-value=4.2e-30  Score=245.09  Aligned_cols=219  Identities=18%  Similarity=0.173  Sum_probs=175.9

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHcCCe-EEEE-ecCc-------------chhhhHhhhc--CCCCeEEEEecCCCHH
Q 021960           29 LEGKVAIITGGARGIGEAAVRLFARHGAK-VVIA-DVED-------------TLGSVLASTL--APAPVTFVHCDVSLEE   91 (305)
Q Consensus        29 l~~k~vlVtGas~giG~~ia~~l~~~g~~-vv~~-~r~~-------------~~~~~~~~~~--~~~~v~~~~~D~~d~~   91 (305)
                      ..++++|||||+||||+++|+.|+++|++ |+++ +|+.             ...+.+.+.+  .+.++.++.||++|.+
T Consensus       249 ~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~  328 (525)
T 3qp9_A          249 QADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDAE  328 (525)
T ss_dssp             CTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSHH
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCHH
Confidence            36899999999999999999999999998 6666 7873             2222222222  2567999999999999


Q ss_pred             HHHHHHHHHHHhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-CCEEEEeccc
Q 021960           92 DIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRG-GGCIISTASV  170 (305)
Q Consensus        92 ~i~~~~~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~  170 (305)
                      +++++++++. ++++||+||||||....    ..+.+.+.+++++.+++|+.+++++.+.+.+.+.+++ .++||++||.
T Consensus       329 ~v~~~~~~i~-~~g~id~vVh~AGv~~~----~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~  403 (525)
T 3qp9_A          329 AAARLLAGVS-DAHPLSAVLHLPPTVDS----EPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSV  403 (525)
T ss_dssp             HHHHHHHTSC-TTSCEEEEEECCCCCCC----CCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEG
T ss_pred             HHHHHHHHHH-hcCCCcEEEECCcCCCC----CchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCH
Confidence            9999999988 78899999999998754    5788899999999999999999999999999887766 7899999999


Q ss_pred             ccccCCCCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHH
Q 021960          171 AGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKM  250 (305)
Q Consensus       171 ~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (305)
                      ++..+.+++..|+++|+++++|+    .++...|+++++|+||+++|+|..+.                     .....+
T Consensus       404 a~~~g~~g~~~YaaaKa~l~~lA----~~~~~~gi~v~sI~pG~~~tgm~~~~---------------------~~~~~~  458 (525)
T 3qp9_A          404 AAIWGGAGQGAYAAGTAFLDALA----GQHRADGPTVTSVAWSPWEGSRVTEG---------------------ATGERL  458 (525)
T ss_dssp             GGTTCCTTCHHHHHHHHHHHHHH----TSCCSSCCEEEEEEECCBTTSGGGSS---------------------HHHHHH
T ss_pred             HHcCCCCCCHHHHHHHHHHHHHH----HHHHhCCCCEEEEECCccccccccch---------------------hhHHHH
Confidence            99999999999999999998874    56677899999999999999985321                     111111


Q ss_pred             HHHHhhcCCCCCCCCCHHHHHHHHHHhccCCCCc
Q 021960          251 EEFVSGLGNLKGTTLRSKDIAEAALYLASDESRY  284 (305)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~~~~  284 (305)
                      ..       ..-..++|+++++.+.++++.....
T Consensus       459 ~~-------~g~~~l~pee~a~~l~~~l~~~~~~  485 (525)
T 3qp9_A          459 RR-------LGLRPLAPATALTALDTALGHGDTA  485 (525)
T ss_dssp             HH-------TTBCCBCHHHHHHHHHHHHHHTCSE
T ss_pred             Hh-------cCCCCCCHHHHHHHHHHHHhCCCCe
Confidence            11       1114568999999999999876433

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.96  E-value=5.1e-29  Score=270.72  Aligned_cols=241  Identities=19%  Similarity=0.179  Sum_probs=176.4

Q ss_pred             CCCCCEEEEecCCCc-hHHHHHHHHHHcCCeEEEEecCcch-----hhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHH
Q 021960           28 RLEGKVAIITGGARG-IGEAAVRLFARHGAKVVIADVEDTL-----GSVLASTL--APAPVTFVHCDVSLEEDIENLINS   99 (305)
Q Consensus        28 ~l~~k~vlVtGas~g-iG~~ia~~l~~~g~~vv~~~r~~~~-----~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~   99 (305)
                      .++||++|||||++| ||+++|+.|+++|++|++++|+...     .+.+.+.+  .+.++..+.+|++|.+++++++++
T Consensus      2133 ~l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~ 2212 (3089)
T 3zen_D         2133 XXXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVEW 2212 (3089)
T ss_dssp             CCCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             cCCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHH
Confidence            479999999999999 9999999999999999999998665     33333333  245688899999999999999999


Q ss_pred             HHH----hcCCccEEEEcCCCCCCC-CCCCcccCCCH----HHHHHHHHHHhHHHHHHHHHHHHHHHcCCCC----EEEE
Q 021960          100 TVS----RYGRLDILYNNAGVLGNQ-RKHKSIIDFDA----DEFDNVMRVNVKGMALGIKHAARVMINRGGG----CIIS  166 (305)
Q Consensus       100 ~~~----~~g~id~li~nag~~~~~-~~~~~~~~~~~----~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~----~iv~  166 (305)
                      +.+    .+|++|+||||||..... .......+.+.    ..++..+++|+.+++.+++.+.+.|.+++.+    .++.
T Consensus      2213 i~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~~ii~~ 2292 (3089)
T 3zen_D         2213 VGTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASRLHVVLP 2292 (3089)
T ss_dssp             HTSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCEEEEEE
T ss_pred             HHhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEEE
Confidence            988    889999999999972100 00011112222    2455669999999999999999999776532    2333


Q ss_pred             ecccccccCCCCCccchhhHHHHHHHHHHHHHH--HCcCCcEEEEEeCCccc-cccchhcccCCCCCchhhhhhccCCCc
Q 021960          167 TASVAGVMGGLGPHAYTASKHAIVGLTKNAACE--LGRYGIRVNCISPFGVA-TSMLVNAWRNSGDGEEEDECMNFGIPS  243 (305)
Q Consensus       167 isS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e--~~~~~i~v~~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (305)
                      .|+..+.  .++...|++||+|+++|+|+++.|  +++ +|+||+|+||+|+ |++....     +            ..
T Consensus      2293 ~ss~~g~--~g~~~aYsASKaAl~~LtrslA~E~~~a~-~IrVn~v~PG~v~tT~l~~~~-----~------------~~ 2352 (3089)
T 3zen_D         2293 GSPNRGM--FGGDGAYGEAKSALDALENRWSAEKSWAE-RVSLAHALIGWTKGTGLMGQN-----D------------AI 2352 (3089)
T ss_dssp             ECSSTTS--CSSCSSHHHHGGGHHHHHHHHHHCSTTTT-TEEEEEEECCCEECSTTTTTT-----T------------TT
T ss_pred             CCccccc--CCCchHHHHHHHHHHHHHHHHHhccccCC-CeEEEEEeecccCCCcccccc-----h------------hH
Confidence            3433332  235668999999999999999999  664 6999999999998 6653210     0            00


Q ss_pred             HHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHHhccCCCCc-eeccEEEec--CCccc
Q 021960          244 QKEVRKMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRY-VSGHNLVVD--GGVTT  298 (305)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~~~~-~tG~~i~id--gG~~~  298 (305)
                      .+.       ...  .+ .+..+|+|||..++||+|+++++ .+|+.+.+|  ||+..
T Consensus      2353 ~~~-------~~~--~~-~r~~~PeEIA~avlfLaS~~a~~~~~~~p~~vdl~GG~~~ 2400 (3089)
T 3zen_D         2353 VSA-------VEE--AG-VTTYTTDEMAAMLLDLCTVETKVAAAGAPVKVDLTGGLGD 2400 (3089)
T ss_dssp             HHH-------HGG--GS-CBCEEHHHHHHHHHHTTSHHHHHHHHHSCEEEECSBSCSS
T ss_pred             HHH-------HHh--cC-CCCCCHHHHHHHHHHHhChhhhhHhcCCeEEEEcCCCcCc
Confidence            010       111  12 23449999999999999998766 456767766  99854

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.95  E-value=6.7e-28  Score=227.69  Aligned_cols=214  Identities=18%  Similarity=0.240  Sum_probs=166.4

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHcCC-eEEEEecCcch---hhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           31 GKVAIITGGARGIGEAAVRLFARHGA-KVVIADVEDTL---GSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        31 ~k~vlVtGas~giG~~ia~~l~~~g~-~vv~~~r~~~~---~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      ++++|||||+||||+++++.|+++|+ .|++++|+...   .+.+.+.+  .+.++.++.||++|.++++++++++.+. 
T Consensus       239 ~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~-  317 (496)
T 3mje_A          239 HGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAELPED-  317 (496)
T ss_dssp             CSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTT-
T ss_pred             CCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHh-
Confidence            58999999999999999999999999 78888886432   22222222  3567999999999999999999988776 


Q ss_pred             CCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchh
Q 021960          105 GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTA  184 (305)
Q Consensus       105 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~  184 (305)
                      +++|+||||||.....   ..+.+.+.+++++.+++|+.+++++.+.+.+    ...++||++||.++..+.+++..|++
T Consensus       318 g~ld~vVh~AGv~~~~---~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~----~~~~~iV~~SS~a~~~g~~g~~~YaA  390 (496)
T 3mje_A          318 APLTAVFHSAGVAHDD---APVADLTLGQLDALMRAKLTAARHLHELTAD----LDLDAFVLFSSGAAVWGSGGQPGYAA  390 (496)
T ss_dssp             SCEEEEEECCCCCCSC---CCTTTCCHHHHHHHHHTTHHHHHHHHHHHTT----SCCSEEEEEEEHHHHTTCTTCHHHHH
T ss_pred             CCCeEEEECCcccCCC---CCcccCCHHHHHHHHHHHHHHHHHHHHHhhc----cCCCEEEEEeChHhcCCCCCcHHHHH
Confidence            6899999999986322   5778899999999999999999888876644    46689999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCC
Q 021960          185 SKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT  264 (305)
Q Consensus       185 sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (305)
                      +|+++++|++.++    ..|+++++|+||++.++......                    ...+.+..      .. -..
T Consensus       391 aKa~ldala~~~~----~~Gi~v~sV~pG~w~~~gm~~~~--------------------~~~~~l~~------~g-~~~  439 (496)
T 3mje_A          391 ANAYLDALAEHRR----SLGLTASSVAWGTWGEVGMATDP--------------------EVHDRLVR------QG-VLA  439 (496)
T ss_dssp             HHHHHHHHHHHHH----HTTCCCEEEEECEESSSCC--------------------------CHHHHH------TT-EEE
T ss_pred             HHHHHHHHHHHHH----hcCCeEEEEECCcccCCccccCh--------------------HHHHHHHh------cC-CCC
Confidence            9999999887554    46999999999998765421100                    00011111      00 123


Q ss_pred             CCHHHHHHHHHHhccCCCC
Q 021960          265 LRSKDIAEAALYLASDESR  283 (305)
Q Consensus       265 ~~~~dva~~v~~l~s~~~~  283 (305)
                      ++|++++..+.++++....
T Consensus       440 l~pe~~~~~l~~~l~~~~~  458 (496)
T 3mje_A          440 MEPEHALGALDQMLENDDT  458 (496)
T ss_dssp             ECHHHHHHHHHHHHHHTCS
T ss_pred             CCHHHHHHHHHHHHcCCCc
Confidence            5899999999998876643

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.95  E-value=1.8e-27  Score=204.48  Aligned_cols=206  Identities=16%  Similarity=0.165  Sum_probs=158.3

Q ss_pred             CCCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCe-EEEEecCCCHHHHHHHHHHHHHh
Q 021960           25 SHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPV-TFVHCDVSLEEDIENLINSTVSR  103 (305)
Q Consensus        25 ~~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v-~~~~~D~~d~~~i~~~~~~~~~~  103 (305)
                      ....+++|++|||||+|+||+++++.|+++|++|++++|+......+..    ..+ .++.+|++         +.+.+.
T Consensus        15 ~~~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~----~~~~~~~~~Dl~---------~~~~~~   81 (236)
T 3e8x_A           15 ENLYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE----RGASDIVVANLE---------EDFSHA   81 (236)
T ss_dssp             ------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH----TTCSEEEECCTT---------SCCGGG
T ss_pred             cccCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh----CCCceEEEcccH---------HHHHHH
Confidence            3457789999999999999999999999999999999998776554433    247 88999998         233444


Q ss_pred             cCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCC---CCCc
Q 021960          104 YGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGG---LGPH  180 (305)
Q Consensus       104 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~---~~~~  180 (305)
                      ++.+|+||||||....            +++++.+++|+.++.++++++..    .+.++||++||..+..+.   +...
T Consensus        82 ~~~~D~vi~~ag~~~~------------~~~~~~~~~n~~~~~~l~~a~~~----~~~~~iv~~SS~~~~~~~~~~~~~~  145 (236)
T 3e8x_A           82 FASIDAVVFAAGSGPH------------TGADKTILIDLWGAIKTIQEAEK----RGIKRFIMVSSVGTVDPDQGPMNMR  145 (236)
T ss_dssp             GTTCSEEEECCCCCTT------------SCHHHHHHTTTHHHHHHHHHHHH----HTCCEEEEECCTTCSCGGGSCGGGH
T ss_pred             HcCCCEEEECCCCCCC------------CCccccchhhHHHHHHHHHHHHH----cCCCEEEEEecCCCCCCCCChhhhh
Confidence            5689999999996421            34778899999999998888743    456899999998777664   4678


Q ss_pred             cchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCC
Q 021960          181 AYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNL  260 (305)
Q Consensus       181 ~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (305)
                      .|+.+|++++.+++       ..+++++.|+||++.+++....+....                            ....
T Consensus       146 ~Y~~sK~~~e~~~~-------~~gi~~~~lrpg~v~~~~~~~~~~~~~----------------------------~~~~  190 (236)
T 3e8x_A          146 HYLVAKRLADDELK-------RSSLDYTIVRPGPLSNEESTGKVTVSP----------------------------HFSE  190 (236)
T ss_dssp             HHHHHHHHHHHHHH-------HSSSEEEEEEECSEECSCCCSEEEEES----------------------------SCSC
T ss_pred             hHHHHHHHHHHHHH-------HCCCCEEEEeCCcccCCCCCCeEEecc----------------------------CCCc
Confidence            99999999999876       468999999999999986433221100                            0122


Q ss_pred             CCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCc
Q 021960          261 KGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGV  296 (305)
Q Consensus       261 ~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~  296 (305)
                      ...++.++|+|+.+++++++..  .+|+++++++|.
T Consensus       191 ~~~~i~~~Dva~~~~~~~~~~~--~~g~~~~v~~~~  224 (236)
T 3e8x_A          191 ITRSITRHDVAKVIAELVDQQH--TIGKTFEVLNGD  224 (236)
T ss_dssp             CCCCEEHHHHHHHHHHHTTCGG--GTTEEEEEEECS
T ss_pred             ccCcEeHHHHHHHHHHHhcCcc--ccCCeEEEeCCC
Confidence            3567799999999999998753  689999998884

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.95  E-value=1.9e-27  Score=236.76  Aligned_cols=176  Identities=21%  Similarity=0.321  Sum_probs=151.7

Q ss_pred             CCCEEEEecCCCchHHHHHHHHH-HcCCe-EEEEecCcch---hhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHH
Q 021960           30 EGKVAIITGGARGIGEAAVRLFA-RHGAK-VVIADVEDTL---GSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVS  102 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~-~~g~~-vv~~~r~~~~---~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~  102 (305)
                      .+|++|||||++|||+++|+.|+ ++|++ |++++|+...   .+.+.+.+  .+.++.++.||++|.++++++++++.+
T Consensus       529 ~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~~  608 (795)
T 3slk_A          529 AAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASIPD  608 (795)
T ss_dssp             TTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCT
T ss_pred             cccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence            58999999999999999999999 79995 8889998432   22222222  366799999999999999999999887


Q ss_pred             hcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccc
Q 021960          103 RYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAY  182 (305)
Q Consensus       103 ~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y  182 (305)
                      .+ +||+||||||....    ..+.+.+.++|++.+++|+.+++++.+.+.+.|      +||++||.++..+.++++.|
T Consensus       609 ~~-~id~lVnnAGv~~~----~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~l------~iV~~SS~ag~~g~~g~~~Y  677 (795)
T 3slk_A          609 EH-PLTAVVHAAGVLDD----GVSESLTVERLDQVLRPKVDGARNLLELIDPDV------ALVLFSSVSGVLGSGGQGNY  677 (795)
T ss_dssp             TS-CEEEEEECCCCCCC----CCGGGCCHHHHHHHHCCCCCHHHHHHHHSCTTS------EEEEEEETHHHHTCSSCHHH
T ss_pred             hC-CCEEEEECCCcCCC----CchhhCCHHHHHHHHHHHHHHHHHHHHHHhhCC------EEEEEccHHhcCCCCCCHHH
Confidence            76 89999999998754    678899999999999999999999999987655      79999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccc
Q 021960          183 TASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSML  220 (305)
Q Consensus       183 ~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~  220 (305)
                      +++|+    |+++|++++++.||++|+|+||++.|++.
T Consensus       678 aAaka----~~~alA~~~~~~Gi~v~sI~pG~v~t~g~  711 (795)
T 3slk_A          678 AAANS----FLDALAQQRQSRGLPTRSLAWGPWAEHGM  711 (795)
T ss_dssp             HHHHH----HHHHHHHHHHHTTCCEEEEEECCCSCCCH
T ss_pred             HHHHH----HHHHHHHHHHHcCCeEEEEECCeECcchh
Confidence            99996    55566667777899999999999998864

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.94  E-value=4.8e-26  Score=215.34  Aligned_cols=212  Identities=17%  Similarity=0.220  Sum_probs=164.8

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHcCCe-EEEEecCcch---hhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHH
Q 021960           29 LEGKVAIITGGARGIGEAAVRLFARHGAK-VVIADVEDTL---GSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVS  102 (305)
Q Consensus        29 l~~k~vlVtGas~giG~~ia~~l~~~g~~-vv~~~r~~~~---~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~  102 (305)
                      ..++++|||||+||||++++++|+++|++ |++++|+...   .+.+.+.+  .+.++.++.||++|.++++++++++ +
T Consensus       224 ~~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i-~  302 (486)
T 2fr1_A          224 KPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGI-G  302 (486)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTS-C
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHH-H
Confidence            35899999999999999999999999995 8899997642   12222211  3557899999999999999999988 5


Q ss_pred             hcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccc
Q 021960          103 RYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAY  182 (305)
Q Consensus       103 ~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y  182 (305)
                      .++++|+||||||....    ..+.+.+.+++++.+++|+.+++++.+.+.+    .+.++||++||.++..+.++...|
T Consensus       303 ~~g~ld~VIh~AG~~~~----~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~----~~~~~~V~~SS~a~~~g~~g~~~Y  374 (486)
T 2fr1_A          303 DDVPLSAVFHAAATLDD----GTVDTLTGERIERASRAKVLGARNLHELTRE----LDLTAFVLFSSFASAFGAPGLGGY  374 (486)
T ss_dssp             TTSCEEEEEECCCCCCC----CCGGGCCHHHHHHHTHHHHHHHHHHHHHHTT----SCCSEEEEEEEHHHHTCCTTCTTT
T ss_pred             hcCCCcEEEECCccCCC----CccccCCHHHHHHHHHHHHHHHHHHHHHhCc----CCCCEEEEEcChHhcCCCCCCHHH
Confidence            66899999999998644    5677889999999999999999988887643    467899999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccc-cchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCC
Q 021960          183 TASKHAIVGLTKNAACELGRYGIRVNCISPFGVATS-MLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLK  261 (305)
Q Consensus       183 ~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (305)
                      +++|++++.|++.++    ..|+++++|+||++.++ |......                          ..+   ....
T Consensus       375 aaaka~l~~la~~~~----~~gi~v~~i~pG~~~~~gm~~~~~~--------------------------~~~---~~~g  421 (486)
T 2fr1_A          375 APGNAYLDGLAQQRR----SDGLPATAVAWGTWAGSGMAEGPVA--------------------------DRF---RRHG  421 (486)
T ss_dssp             HHHHHHHHHHHHHHH----HTTCCCEEEEECCBC--------------------------------------C---TTTT
T ss_pred             HHHHHHHHHHHHHHH----hcCCeEEEEECCeeCCCcccchhHH--------------------------HHH---HhcC
Confidence            999999999876544    45899999999999876 4211100                          000   0011


Q ss_pred             CCCCCHHHHHHHHHHhccCCC
Q 021960          262 GTTLRSKDIAEAALYLASDES  282 (305)
Q Consensus       262 ~~~~~~~dva~~v~~l~s~~~  282 (305)
                      -..++++++++.+..+++...
T Consensus       422 ~~~i~~e~~a~~l~~~l~~~~  442 (486)
T 2fr1_A          422 VIEMPPETACRALQNALDRAE  442 (486)
T ss_dssp             EECBCHHHHHHHHHHHHHTTC
T ss_pred             CCCCCHHHHHHHHHHHHhCCC
Confidence            135689999999999987653

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.94  E-value=5.5e-26  Score=199.05  Aligned_cols=158  Identities=16%  Similarity=0.164  Sum_probs=134.3

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 021960           29 LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLD  108 (305)
Q Consensus        29 l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id  108 (305)
                      |++|++|||||+||||+++++.|+++|++|++++|+.....       ..++.++.+|++|.++++++++       ++|
T Consensus         1 m~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~-------~~~~~~~~~Dl~d~~~~~~~~~-------~~D   66 (267)
T 3rft_A            1 MAMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA-------GPNEECVQCDLADANAVNAMVA-------GCD   66 (267)
T ss_dssp             CCEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC-------CTTEEEEECCTTCHHHHHHHHT-------TCS
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc-------CCCCEEEEcCCCCHHHHHHHHc-------CCC
Confidence            35689999999999999999999999999999999865432       3458999999999999998876       699


Q ss_pred             EEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccc------------cCC
Q 021960          109 ILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGV------------MGG  176 (305)
Q Consensus       109 ~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~------------~~~  176 (305)
                      +||||||...            .+.+++.+++|+.+++++++.+.+    .+.++||++||..++            .+.
T Consensus        67 ~vi~~Ag~~~------------~~~~~~~~~~N~~g~~~l~~a~~~----~~~~~iv~~SS~~~~g~~~~~~~~~e~~~~  130 (267)
T 3rft_A           67 GIVHLGGISV------------EKPFEQILQGNIIGLYNLYEAARA----HGQPRIVFASSNHTIGYYPQTERLGPDVPA  130 (267)
T ss_dssp             EEEECCSCCS------------CCCHHHHHHHHTHHHHHHHHHHHH----TTCCEEEEEEEGGGGTTSBTTSCBCTTSCC
T ss_pred             EEEECCCCcC------------cCCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEcchHHhCCCCCCCCCCCCCCC
Confidence            9999999732            134688899999999999998844    567899999998877            334


Q ss_pred             CCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCcccccc
Q 021960          177 LGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSM  219 (305)
Q Consensus       177 ~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~  219 (305)
                      +....|+.+|++.+.+++.++.++   +++++.|+||.+.+++
T Consensus       131 ~~~~~Y~~sK~~~e~~~~~~a~~~---g~~~~~vr~~~v~~~~  170 (267)
T 3rft_A          131 RPDGLYGVSKCFGENLARMYFDKF---GQETALVRIGSCTPEP  170 (267)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECBCSSSC
T ss_pred             CCCChHHHHHHHHHHHHHHHHHHh---CCeEEEEEeecccCCC
Confidence            456789999999999999999885   7899999999998874

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.93  E-value=8.4e-25  Score=207.74  Aligned_cols=208  Identities=22%  Similarity=0.324  Sum_probs=164.3

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCC-eEEEEecCcch---hhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHh
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGA-KVVIADVEDTL---GSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSR  103 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~-~vv~~~r~~~~---~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~  103 (305)
                      .++++|||||+||||++++++|+++|+ +|++++|+...   .+.+.+.+  .+.++.++.||++|.++++++++.    
T Consensus       258 ~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~----  333 (511)
T 2z5l_A          258 PSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTA----  333 (511)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHH----
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhc----
Confidence            579999999999999999999999999 58888887632   22222222  355799999999999999998876    


Q ss_pred             cCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccch
Q 021960          104 YGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYT  183 (305)
Q Consensus       104 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~  183 (305)
                       +++|+||||||....    ..+.+.+.+++++.+++|+.+++++.+.+.+ +  .+.++||++||.++..+.++...|+
T Consensus       334 -~~ld~VVh~AGv~~~----~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~-~--~~~~~~V~~SS~a~~~g~~g~~~Ya  405 (511)
T 2z5l_A          334 -YPPNAVFHTAGILDD----AVIDTLSPESFETVRGAKVCGAELLHQLTAD-I--KGLDAFVLFSSVTGTWGNAGQGAYA  405 (511)
T ss_dssp             -SCCSEEEECCCCCCC----BCGGGCCHHHHHHHHHHHHHHHHHHHHHTSS-C--TTCCCEEEEEEGGGTTCCTTBHHHH
T ss_pred             -CCCcEEEECCcccCC----cccccCCHHHHHHHHHHHHHHHHHHHHHHhh-c--cCCCEEEEEeCHHhcCCCCCCHHHH
Confidence             689999999998654    5677889999999999999999988876532 1  1568999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHCcCCcEEEEEeCCcc-ccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCC
Q 021960          184 ASKHAIVGLTKNAACELGRYGIRVNCISPFGV-ATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKG  262 (305)
Q Consensus       184 ~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v-~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (305)
                      ++|++++.|++.++    ..|+++++|+||++ +|.|....                      ....+..  ..     -
T Consensus       406 aaKa~ld~la~~~~----~~gi~v~sv~pG~~~~tgm~~~~----------------------~~~~~~~--~g-----~  452 (511)
T 2z5l_A          406 AANAALDALAERRR----AAGLPATSVAWGLWGGGGMAAGA----------------------GEESLSR--RG-----L  452 (511)
T ss_dssp             HHHHHHHHHHHHHH----TTTCCCEEEEECCBCSTTCCCCH----------------------HHHHHHH--HT-----B
T ss_pred             HHHHHHHHHHHHHH----HcCCcEEEEECCcccCCcccccc----------------------cHHHHHh--cC-----C
Confidence            99999999988654    46899999999999 77774221                      0011110  11     1


Q ss_pred             CCCCHHHHHHHHHHhccCCC
Q 021960          263 TTLRSKDIAEAALYLASDES  282 (305)
Q Consensus       263 ~~~~~~dva~~v~~l~s~~~  282 (305)
                      ..++++++++.+..++....
T Consensus       453 ~~l~~e~~a~~l~~al~~~~  472 (511)
T 2z5l_A          453 RAMDPDAAVDALLGAMGRND  472 (511)
T ss_dssp             CCBCHHHHHHHHHHHHHHTC
T ss_pred             CCCCHHHHHHHHHHHHhCCC
Confidence            35689999999999987653

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.93  E-value=7.3e-25  Score=198.91  Aligned_cols=229  Identities=15%  Similarity=0.096  Sum_probs=170.8

Q ss_pred             CCCCCCCCCCEEEEecCCCchHHHHHHHHHHc-CC-eEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHH
Q 021960           23 PPSHRRLEGKVAIITGGARGIGEAAVRLFARH-GA-KVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINST  100 (305)
Q Consensus        23 ~~~~~~l~~k~vlVtGas~giG~~ia~~l~~~-g~-~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~  100 (305)
                      +++...+++|++|||||+|+||++++++|+++ |+ +|++++|++.....+...+...++.++.+|++|.++++++++  
T Consensus        13 ~~~~~~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~--   90 (344)
T 2gn4_A           13 PNHQNMLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYALE--   90 (344)
T ss_dssp             ---CCTTTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCHHHHHHHTT--
T ss_pred             ccHHHhhCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCHHHHHHHHh--
Confidence            33445678999999999999999999999999 98 999999987665555444445579999999999988887764  


Q ss_pred             HHhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCc
Q 021960          101 VSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPH  180 (305)
Q Consensus       101 ~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~  180 (305)
                           .+|+||||||....     +   .......+.+++|+.++.++++++.+    .+.++||++||..+..|   ..
T Consensus        91 -----~~D~Vih~Aa~~~~-----~---~~~~~~~~~~~~Nv~gt~~l~~aa~~----~~v~~~V~~SS~~~~~p---~~  150 (344)
T 2gn4_A           91 -----GVDICIHAAALKHV-----P---IAEYNPLECIKTNIMGASNVINACLK----NAISQVIALSTDKAANP---IN  150 (344)
T ss_dssp             -----TCSEEEECCCCCCH-----H---HHHHSHHHHHHHHHHHHHHHHHHHHH----TTCSEEEEECCGGGSSC---CS
T ss_pred             -----cCCEEEECCCCCCC-----C---chhcCHHHHHHHHHHHHHHHHHHHHh----CCCCEEEEecCCccCCC---cc
Confidence                 69999999996421     1   12234568899999999999998876    45679999999876654   46


Q ss_pred             cchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHH--hhc-
Q 021960          181 AYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFV--SGL-  257 (305)
Q Consensus       181 ~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-  257 (305)
                      .|+.+|++.+.+++.++.++++.|+++++|+||.+.++... ..                   .........-.  -.+ 
T Consensus       151 ~Y~~sK~~~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~~~-~i-------------------~~~~~~~~~g~~~~~i~  210 (344)
T 2gn4_A          151 LYGATKLCSDKLFVSANNFKGSSQTQFSVVRYGNVVGSRGS-VV-------------------PFFKKLVQNKASEIPIT  210 (344)
T ss_dssp             HHHHHHHHHHHHHHHGGGCCCSSCCEEEEECCCEETTCTTS-HH-------------------HHHHHHHHHTCCCEEES
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCCCcEEEEEEeccEECCCCC-HH-------------------HHHHHHHHcCCCceEEe
Confidence            89999999999999999988888999999999999886411 00                   01111111100  000 


Q ss_pred             -CCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCc
Q 021960          258 -GNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGV  296 (305)
Q Consensus       258 -~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~  296 (305)
                       +.....++.++|+|+++++++...   ..|+++.++++.
T Consensus       211 ~~~~~r~~i~v~D~a~~v~~~l~~~---~~g~~~~~~~~~  247 (344)
T 2gn4_A          211 DIRMTRFWITLDEGVSFVLKSLKRM---HGGEIFVPKIPS  247 (344)
T ss_dssp             CTTCEEEEECHHHHHHHHHHHHHHC---CSSCEEEECCCE
T ss_pred             CCCeEEeeEEHHHHHHHHHHHHhhc---cCCCEEecCCCc
Confidence             111233679999999999998764   368888888763

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.93  E-value=2.1e-24  Score=183.57  Aligned_cols=194  Identities=8%  Similarity=0.022  Sum_probs=145.8

Q ss_pred             CCEEEEecCCCchHHHHHHHHH-HcCCeEEEEecCcc-hhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 021960           31 GKVAIITGGARGIGEAAVRLFA-RHGAKVVIADVEDT-LGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLD  108 (305)
Q Consensus        31 ~k~vlVtGas~giG~~ia~~l~-~~g~~vv~~~r~~~-~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id  108 (305)
                      .|++|||||+|+||+++++.|+ ++|++|++++|+.. ..+.+..  ...++.++.+|++|.++++++++       .+|
T Consensus         5 mk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~--~~~~~~~~~~D~~d~~~~~~~~~-------~~d   75 (221)
T 3r6d_A            5 YXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEII--DHERVTVIEGSFQNPGXLEQAVT-------NAE   75 (221)
T ss_dssp             CSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHH--TSTTEEEEECCTTCHHHHHHHHT-------TCS
T ss_pred             EEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhcc--CCCceEEEECCCCCHHHHHHHHc-------CCC
Confidence            3789999999999999999999 89999999999876 5443321  24568999999999999988775       689


Q ss_pred             EEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCc--------
Q 021960          109 ILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPH--------  180 (305)
Q Consensus       109 ~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~--------  180 (305)
                      +||||||..                       |+.     ++.+++.|.+.+.++||++||..+..+.+...        
T Consensus        76 ~vv~~ag~~-----------------------n~~-----~~~~~~~~~~~~~~~iv~iSs~~~~~~~~~~~~~~~~~~~  127 (221)
T 3r6d_A           76 VVFVGAMES-----------------------GSD-----MASIVKALSRXNIRRVIGVSMAGLSGEFPVALEKWTFDNL  127 (221)
T ss_dssp             EEEESCCCC-----------------------HHH-----HHHHHHHHHHTTCCEEEEEEETTTTSCSCHHHHHHHHHTS
T ss_pred             EEEEcCCCC-----------------------Chh-----HHHHHHHHHhcCCCeEEEEeeceecCCCCccccccccccc
Confidence            999999841                       222     67777888778888999999998877655444        


Q ss_pred             --cchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcC
Q 021960          181 --AYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLG  258 (305)
Q Consensus       181 --~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (305)
                        .|+.+|.+++.+++.       .+++++.|+||++.++.....+....                           ...
T Consensus       128 ~~~y~~~K~~~e~~~~~-------~~i~~~~vrpg~v~~~~~~~~~~~~~---------------------------~~~  173 (221)
T 3r6d_A          128 PISYVQGERQARNVLRE-------SNLNYTILRLTWLYNDPEXTDYELIP---------------------------EGA  173 (221)
T ss_dssp             CHHHHHHHHHHHHHHHH-------SCSEEEEEEECEEECCTTCCCCEEEC---------------------------TTS
T ss_pred             ccHHHHHHHHHHHHHHh-------CCCCEEEEechhhcCCCCCcceeecc---------------------------CCc
Confidence              899999999887753       68999999999998873211111000                           000


Q ss_pred             CCCCCCCCHHHHHHHHHHhc--cCCCCceeccEEEecCC
Q 021960          259 NLKGTTLRSKDIAEAALYLA--SDESRYVSGHNLVVDGG  295 (305)
Q Consensus       259 ~~~~~~~~~~dva~~v~~l~--s~~~~~~tG~~i~idgG  295 (305)
                      ...+..++++|+|+.+++++  ++++.++++.+...+.+
T Consensus       174 ~~~~~~~~~~dvA~~~~~l~~~~~~~~~~~~~~~i~~~~  212 (221)
T 3r6d_A          174 QFNDAQVSREAVVKAIFDILHAADETPFHRTSIGVGEPG  212 (221)
T ss_dssp             CCCCCEEEHHHHHHHHHHHHTCSCCGGGTTEEEEEECTT
T ss_pred             cCCCceeeHHHHHHHHHHHHHhcChhhhhcceeeecCCC
Confidence            12234678999999999999  88877775554444444

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=99.92  E-value=1.4e-24  Score=194.45  Aligned_cols=222  Identities=15%  Similarity=0.089  Sum_probs=164.9

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDI  109 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~  109 (305)
                      +.+++|||||+|+||+++++.|+++|++|++++|+... ..    +   ++.++.+|++|.++++++++.     +++|+
T Consensus        11 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~----l---~~~~~~~Dl~d~~~~~~~~~~-----~~~d~   77 (321)
T 2pk3_A           11 GSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL----P---NVEMISLDIMDSQRVKKVISD-----IKPDY   77 (321)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC----T---TEEEEECCTTCHHHHHHHHHH-----HCCSE
T ss_pred             CcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc----c---eeeEEECCCCCHHHHHHHHHh-----cCCCE
Confidence            45799999999999999999999999999999987654 21    1   488899999999999988875     36999


Q ss_pred             EEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCC-------------
Q 021960          110 LYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGG-------------  176 (305)
Q Consensus       110 li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~-------------  176 (305)
                      ||||||....        +.+.+++++.+++|+.++.++++++ +.+  .+.++||++||.+.+.+.             
T Consensus        78 vih~A~~~~~--------~~~~~~~~~~~~~Nv~g~~~l~~a~-~~~--~~~~~iv~~SS~~v~g~~~~~~~~~~E~~~~  146 (321)
T 2pk3_A           78 IFHLAAKSSV--------KDSWLNKKGTFSTNVFGTLHVLDAV-RDS--NLDCRILTIGSSEEYGMILPEESPVSEENQL  146 (321)
T ss_dssp             EEECCSCCCH--------HHHTTCHHHHHHHHHHHHHHHHHHH-HHH--TCCCEEEEEEEGGGTBSCCGGGCSBCTTSCC
T ss_pred             EEEcCcccch--------hhhhhcHHHHHHHHHHHHHHHHHHH-HHh--CCCCeEEEEccHHhcCCCCCCCCCCCCCCCC
Confidence            9999996421        1122357889999999999999998 544  346899999998755322             


Q ss_pred             CCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHH---
Q 021960          177 LGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEF---  253 (305)
Q Consensus       177 ~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  253 (305)
                      +....|+.+|++.+.+++.++.++   |++++.++||.+.++.....  .               .....+..+...   
T Consensus       147 ~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~g~~~~~~--~---------------~~~~~~~~~~~~~~g  206 (321)
T 2pk3_A          147 RPMSPYGVSKASVGMLARQYVKAY---GMDIIHTRTFNHIGPGQSLG--F---------------VTQDFAKQIVDIEME  206 (321)
T ss_dssp             BCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECTTCCTT--S---------------HHHHHHHHHHHHHTT
T ss_pred             CCCCccHHHHHHHHHHHHHHHHHc---CCCEEEEEeCcccCcCCCCC--c---------------hHHHHHHHHHHHhcC
Confidence            346789999999999999999874   89999999999998863210  0               000111111110   


Q ss_pred             ----Hhhc--CCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          254 ----VSGL--GNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       254 ----~~~~--~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                          ...+  +.+...++.++|+|+++++++++.   .+|+++++++|...
T Consensus       207 ~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~---~~g~~~~i~~~~~~  254 (321)
T 2pk3_A          207 KQEPIIKVGNLEAVRDFTDVRDIVQAYWLLSQYG---KTGDVYNVCSGIGT  254 (321)
T ss_dssp             SSCSEEEESCSSCEEEEEEHHHHHHHHHHHHHHC---CTTCEEEESCSCEE
T ss_pred             CCCCeEEeCCCCcEEeeEEHHHHHHHHHHHHhCC---CCCCeEEeCCCCCe
Confidence                0000  122344679999999999999865   47999999998644

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=99.92  E-value=4.9e-24  Score=192.77  Aligned_cols=231  Identities=16%  Similarity=0.121  Sum_probs=164.7

Q ss_pred             CEEEEecCCCchHHHHHHHHHHcCCeEEEEecCc-chh-hhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 021960           32 KVAIITGGARGIGEAAVRLFARHGAKVVIADVED-TLG-SVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDI  109 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~-~~~-~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~  109 (305)
                      +++|||||+|+||+++++.|+++|++|++++|.. ... ..........++.++.+|++|.++++++++..     ++|+
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~d~   76 (347)
T 1orr_A            2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKY-----MPDS   76 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHH-----CCSE
T ss_pred             cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhccCCceEEEEcCCCCHHHHHHHHhcc-----CCCE
Confidence            5799999999999999999999999999998743 111 11111112245889999999999999888752     6999


Q ss_pred             EEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEeccccccc---------------
Q 021960          110 LYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVM---------------  174 (305)
Q Consensus       110 li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~---------------  174 (305)
                      ||||||....        +.+.+++++.+++|+.++.++++++.+.+.   +++||++||.+.+.               
T Consensus        77 vih~A~~~~~--------~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~---~~~iv~~SS~~v~g~~~~~~~~e~~~~~~  145 (347)
T 1orr_A           77 CFHLAGQVAM--------TTSIDNPCMDFEINVGGTLNLLEAVRQYNS---NCNIIYSSTNKVYGDLEQYKYNETETRYT  145 (347)
T ss_dssp             EEECCCCCCH--------HHHHHCHHHHHHHHHHHHHHHHHHHHHHCT---TCEEEEEEEGGGGTTCTTSCEEECSSCEE
T ss_pred             EEECCcccCh--------hhhhhCHHHHHHHHHHHHHHHHHHHHHhCC---CceEEEeccHHHhCCCCcCCccccccccc
Confidence            9999996421        123456788999999999999999887542   26899999976542               


Q ss_pred             ------------CCCCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCC
Q 021960          175 ------------GGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIP  242 (305)
Q Consensus       175 ------------~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~  242 (305)
                                  +......|+.+|++.+.+++.++.++   |+++++++||.+.++........   .  .         
T Consensus       146 ~~~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~g~~~~~~~~~---~--~---------  208 (347)
T 1orr_A          146 CVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIF---GLNTVVFRHSSMYGGRQFATYDQ---G--W---------  208 (347)
T ss_dssp             ETTCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTCCCBTTB---C--H---------
T ss_pred             ccccccCccccCCCCCCCchHHHHHHHHHHHHHHHHHh---CCcEEEEccCceeCcCCCCCCcC---c--H---------
Confidence                        12345689999999999999999885   79999999999999863211000   0  0         


Q ss_pred             cHHHHHHHHHHH-------hhc--CCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCc
Q 021960          243 SQKEVRKMEEFV-------SGL--GNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGV  296 (305)
Q Consensus       243 ~~~~~~~~~~~~-------~~~--~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~  296 (305)
                      ....+.....-.       ..+  +.....++.++|+|++++++++. ....+|++++++||.
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~-~~~~~g~~~~v~~~~  270 (347)
T 1orr_A          209 VGWFCQKAVEIKNGINKPFTISGNGKQVRDVLHAEDMISLYFTALAN-VSKIRGNAFNIGGTI  270 (347)
T ss_dssp             HHHHHHHHHHHHTTCCCCEEEESSSCCEEECEEHHHHHHHHHHHHHT-HHHHTTCEEEESSCG
T ss_pred             HHHHHHHHHhCcccCCCCeEEecCCcceEeeEEHHHHHHHHHHHHhc-cccCCCCEEEeCCCC
Confidence            001111111100       000  11122367899999999999874 234689999999985

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=99.92  E-value=6.1e-24  Score=191.52  Aligned_cols=225  Identities=16%  Similarity=0.059  Sum_probs=163.1

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcC--CeEEEEecCcc--hhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcC
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHG--AKVVIADVEDT--LGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYG  105 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g--~~vv~~~r~~~--~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g  105 (305)
                      +++++|||||+|+||+++++.|+++|  ++|++++|...  ..+.+.......++.++.+|++|.+++++++       +
T Consensus         2 ~~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~-------~   74 (336)
T 2hun_A            2 HSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKGDVADYELVKELV-------R   74 (336)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHH-------H
T ss_pred             CCCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHhhhccCCceEEEEcCCCCHHHHHHHh-------h
Confidence            45689999999999999999999996  89999988642  1222222212456899999999999988877       2


Q ss_pred             CccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEeccccccc-----------
Q 021960          106 RLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVM-----------  174 (305)
Q Consensus       106 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~-----------  174 (305)
                      .+|+||||||....        +.+.+++++.+++|+.++.++++++.+.   ...++||++||.+.+-           
T Consensus        75 ~~d~vih~A~~~~~--------~~~~~~~~~~~~~Nv~g~~~l~~a~~~~---~~~~~iv~~SS~~vyg~~~~~~~~E~~  143 (336)
T 2hun_A           75 KVDGVVHLAAESHV--------DRSISSPEIFLHSNVIGTYTLLESIRRE---NPEVRFVHVSTDEVYGDILKGSFTEND  143 (336)
T ss_dssp             TCSEEEECCCCCCH--------HHHHHCTHHHHHHHHHHHHHHHHHHHHH---CTTSEEEEEEEGGGGCCCSSSCBCTTB
T ss_pred             CCCEEEECCCCcCh--------hhhhhCHHHHHHHHHHHHHHHHHHHHHh---CCCcEEEEeccHHHHCCCCCCCcCCCC
Confidence            69999999996421        1234567788999999999999998875   2247999999976432           


Q ss_pred             CCCCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHH
Q 021960          175 GGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFV  254 (305)
Q Consensus       175 ~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (305)
                      +......|+.+|++.+.+++.++.++   +++++.++||.+.++.....                    ......+....
T Consensus       144 ~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~v~g~~~~~~--------------------~~~~~~~~~~~  200 (336)
T 2hun_A          144 RLMPSSPYSATKAASDMLVLGWTRTY---NLNASITRCTNNYGPYQFPE--------------------KLIPKTIIRAS  200 (336)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHT---TCEEEEEEECEEESTTCCTT--------------------SHHHHHHHHHH
T ss_pred             CCCCCCccHHHHHHHHHHHHHHHHHh---CCCEEEEeeeeeeCcCCCcC--------------------chHHHHHHHHH
Confidence            23445789999999999999999874   79999999999998863110                    00000111111


Q ss_pred             hhc-------CCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          255 SGL-------GNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       255 ~~~-------~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      ...       +.....++.++|+|+++++++++.   .+|+++++++|...
T Consensus       201 ~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~---~~g~~~~v~~~~~~  248 (336)
T 2hun_A          201 LGLKIPIYGTGKNVRDWLYVEDHVRAIELVLLKG---ESREIYNISAGEEK  248 (336)
T ss_dssp             TTCCEEEETC---CEEEEEHHHHHHHHHHHHHHC---CTTCEEEECCSCEE
T ss_pred             cCCCceEeCCCCceeeeEEHHHHHHHHHHHHhCC---CCCCEEEeCCCCcc
Confidence            110       112345678999999999998764   37999999998643

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=99.92  E-value=5.1e-24  Score=193.88  Aligned_cols=230  Identities=17%  Similarity=0.089  Sum_probs=166.5

Q ss_pred             EEEEecCCCchHHHHHHHHHHc-CCeEEEEecCcc--hhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 021960           33 VAIITGGARGIGEAAVRLFARH-GAKVVIADVEDT--LGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDI  109 (305)
Q Consensus        33 ~vlVtGas~giG~~ia~~l~~~-g~~vv~~~r~~~--~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~  109 (305)
                      ++|||||+|+||+++++.|+++ |++|++++|+..  ..+.+.+.....++.++.+|++|.+++++++++.     ++|+
T Consensus         2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~d~   76 (361)
T 1kew_A            2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQY-----QPDA   76 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHH-----CCSE
T ss_pred             EEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhhhhhhcCCCeEEEECCCCCHHHHHHHHhhc-----CCCE
Confidence            5899999999999999999998 799999988642  2222222222346899999999999999888753     6999


Q ss_pred             EEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC-----CCCEEEEeccccccc----------
Q 021960          110 LYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINR-----GGGCIISTASVAGVM----------  174 (305)
Q Consensus       110 li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~iv~isS~~~~~----------  174 (305)
                      ||||||....        +.+.+++++.+++|+.++.++++++.+.|..-     +.++||++||.+.+-          
T Consensus        77 vih~A~~~~~--------~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~  148 (361)
T 1kew_A           77 VMHLAAESHV--------DRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVEN  148 (361)
T ss_dssp             EEECCSCCCH--------HHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCT
T ss_pred             EEECCCCcCh--------hhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCcccccccc
Confidence            9999996421        12345678899999999999999999876431     135999999975331          


Q ss_pred             -----------CCCCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCc
Q 021960          175 -----------GGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPS  243 (305)
Q Consensus       175 -----------~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (305)
                                 +.+....|+.+|++.+.+++.++.++   ++++++++||.+.++.....  .      .         .
T Consensus       149 ~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~~vrp~~v~G~~~~~~--~------~---------~  208 (361)
T 1kew_A          149 SVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY---GLPTIVTNCSNNYGPYHFPE--K------L---------I  208 (361)
T ss_dssp             TSCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTTCCTT--S------H---------H
T ss_pred             cccCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCcEEEEeeceeECCCCCcc--c------H---------H
Confidence                       12345789999999999999999885   79999999999999863210  0      0         0


Q ss_pred             HHHHHHHHHH--Hh--hcCCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          244 QKEVRKMEEF--VS--GLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       244 ~~~~~~~~~~--~~--~~~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      ...+..+..-  ..  .-+.....++.++|+|+++++++++.   .+|+++++++|...
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~---~~g~~~~v~~~~~~  264 (361)
T 1kew_A          209 PLVILNALEGKPLPIYGKGDQIRDWLYVEDHARALHMVVTEG---KAGETYNIGGHNEK  264 (361)
T ss_dssp             HHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHC---CTTCEEEECCCCEE
T ss_pred             HHHHHHHHcCCCceEcCCCceeEeeEEHHHHHHHHHHHHhCC---CCCCEEEecCCCee
Confidence            0111111110  00  00112345678999999999999764   47999999998643

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.92  E-value=6.6e-25  Score=188.94  Aligned_cols=199  Identities=14%  Similarity=0.085  Sum_probs=147.3

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHcCC--eEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCC
Q 021960           29 LEGKVAIITGGARGIGEAAVRLFARHGA--KVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGR  106 (305)
Q Consensus        29 l~~k~vlVtGas~giG~~ia~~l~~~g~--~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~  106 (305)
                      +++|++|||||+|+||+++++.|+++|+  +|++++|+........    ..++.++.+|++|.++++++++       .
T Consensus        16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~----~~~~~~~~~D~~d~~~~~~~~~-------~   84 (242)
T 2bka_A           16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA----YKNVNQEVVDFEKLDDYASAFQ-------G   84 (242)
T ss_dssp             HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG----GGGCEEEECCGGGGGGGGGGGS-------S
T ss_pred             hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccc----cCCceEEecCcCCHHHHHHHhc-------C
Confidence            5689999999999999999999999999  9999999865433221    1247889999999888877654       6


Q ss_pred             ccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhH
Q 021960          107 LDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASK  186 (305)
Q Consensus       107 id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  186 (305)
                      +|+||||||...           ....+++.+++|+.++..+++.+.    +.+.++||++||.++..+  ....|+.+|
T Consensus        85 ~d~vi~~ag~~~-----------~~~~~~~~~~~n~~~~~~~~~~~~----~~~~~~iv~~SS~~~~~~--~~~~Y~~sK  147 (242)
T 2bka_A           85 HDVGFCCLGTTR-----------GKAGAEGFVRVDRDYVLKSAELAK----AGGCKHFNLLSSKGADKS--SNFLYLQVK  147 (242)
T ss_dssp             CSEEEECCCCCH-----------HHHHHHHHHHHHTHHHHHHHHHHH----HTTCCEEEEECCTTCCTT--CSSHHHHHH
T ss_pred             CCEEEECCCccc-----------ccCCcccceeeeHHHHHHHHHHHH----HCCCCEEEEEccCcCCCC--CcchHHHHH
Confidence            999999999631           124567889999999988777653    356689999999887643  456899999


Q ss_pred             HHHHHHHHHHHHHHCcCCc-EEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcC--CCCCC
Q 021960          187 HAIVGLTKNAACELGRYGI-RVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLG--NLKGT  263 (305)
Q Consensus       187 aa~~~~~~~la~e~~~~~i-~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~  263 (305)
                      ++++.+++.+       ++ ++++|+||.+.|++......                  +...   ........  ...++
T Consensus       148 ~~~e~~~~~~-------~~~~~~~vrpg~v~~~~~~~~~~------------------~~~~---~~~~~~~~~~~~~~~  199 (242)
T 2bka_A          148 GEVEAKVEEL-------KFDRYSVFRPGVLLCDRQESRPG------------------EWLV---RKFFGSLPDSWASGH  199 (242)
T ss_dssp             HHHHHHHHTT-------CCSEEEEEECCEEECTTGGGSHH------------------HHHH---HHHHCSCCTTGGGGT
T ss_pred             HHHHHHHHhc-------CCCCeEEEcCceecCCCCCCcHH------------------HHHH---HHhhcccCccccCCc
Confidence            9999998653       45 79999999999986321100                  0000   11111110  01356


Q ss_pred             CCCHHHHHHHHHHhccCCCC
Q 021960          264 TLRSKDIAEAALYLASDESR  283 (305)
Q Consensus       264 ~~~~~dva~~v~~l~s~~~~  283 (305)
                      ++.++|+|+.++++++++..
T Consensus       200 ~~~~~dva~~~~~~~~~~~~  219 (242)
T 2bka_A          200 SVPVVTVVRAMLNNVVRPRD  219 (242)
T ss_dssp             EEEHHHHHHHHHHHHTSCCC
T ss_pred             ccCHHHHHHHHHHHHhCccc
Confidence            78999999999999987653

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=99.92  E-value=2e-24  Score=194.59  Aligned_cols=221  Identities=17%  Similarity=0.126  Sum_probs=157.3

Q ss_pred             CCCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           25 SHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        25 ~~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      ...+++++++|||||+|+||+++++.|+++|++|++++|+..........+  .++.++.+|++|.++++++++++    
T Consensus        14 ~~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l--~~v~~~~~Dl~d~~~~~~~~~~~----   87 (330)
T 2pzm_A           14 LVPRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPV--AGLSVIEGSVTDAGLLERAFDSF----   87 (330)
T ss_dssp             CCSTTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSC--TTEEEEECCTTCHHHHHHHHHHH----
T ss_pred             CcccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhcc--CCceEEEeeCCCHHHHHHHHhhc----
Confidence            345778999999999999999999999999999999999654332111111  35889999999999999888765    


Q ss_pred             CCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCC-----C--
Q 021960          105 GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGG-----L--  177 (305)
Q Consensus       105 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~-----~--  177 (305)
                       .+|+||||||....    .     +.++++  +++|+.++.++++++..    .+.++||++||.+.+.+.     +  
T Consensus        88 -~~D~vih~A~~~~~----~-----~~~~~~--~~~N~~~~~~l~~a~~~----~~~~~iV~~SS~~~~~~~~~~~~~~~  151 (330)
T 2pzm_A           88 -KPTHVVHSAAAYKD----P-----DDWAED--AATNVQGSINVAKAASK----AGVKRLLNFQTALCYGRPATVPIPID  151 (330)
T ss_dssp             -CCSEEEECCCCCSC----T-----TCHHHH--HHHHTHHHHHHHHHHHH----HTCSEEEEEEEGGGGCSCSSSSBCTT
T ss_pred             -CCCEEEECCccCCC----c-----cccChh--HHHHHHHHHHHHHHHHH----cCCCEEEEecCHHHhCCCccCCCCcC
Confidence             69999999997532    1     334555  89999999999998864    456799999998775433     2  


Q ss_pred             ----CCccchhhHHHHHHHHHHHHHHHCcCCcE-EEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHH
Q 021960          178 ----GPHAYTASKHAIVGLTKNAACELGRYGIR-VNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEE  252 (305)
Q Consensus       178 ----~~~~Y~~sKaa~~~~~~~la~e~~~~~i~-v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (305)
                          ....|+.+|++.+.+++.+  ++....+| ++.+.||. .+.+....                       +..+..
T Consensus       152 E~~~~~~~Y~~sK~~~e~~~~~~--~~~~~~iR~~~v~gp~~-~~~~~~~~-----------------------~~~~~~  205 (330)
T 2pzm_A          152 SPTAPFTSYGISKTAGEAFLMMS--DVPVVSLRLANVTGPRL-AIGPIPTF-----------------------YKRLKA  205 (330)
T ss_dssp             CCCCCCSHHHHHHHHHHHHHHTC--SSCEEEEEECEEECTTC-CSSHHHHH-----------------------HHHHHT
T ss_pred             CCCCCCChHHHHHHHHHHHHHHc--CCCEEEEeeeeeECcCC-CCCHHHHH-----------------------HHHHHc
Confidence                5678999999999999876  33333445 45555553 23321111                       011100


Q ss_pred             HHhhc--CCCCCCCCCHHHHHH-HHHHhccCCCCceeccEEEecCCccc
Q 021960          253 FVSGL--GNLKGTTLRSKDIAE-AALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       253 ~~~~~--~~~~~~~~~~~dva~-~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      -...+  .. ...++.++|+|+ +++++++...    |+++++++|...
T Consensus       206 ~~~~~~~~~-~~~~i~~~Dva~~a~~~~~~~~~----g~~~~v~~~~~~  249 (330)
T 2pzm_A          206 GQKCFCSDT-VRDFLDMSDFLAIADLSLQEGRP----TGVFNVSTGEGH  249 (330)
T ss_dssp             TCCCCEESC-EECEEEHHHHHHHHHHHTSTTCC----CEEEEESCSCCE
T ss_pred             CCEEeCCCC-EecceeHHHHHHHHHHHHhhcCC----CCEEEeCCCCCC
Confidence            00000  11 346789999999 9999998742    999999998654

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.92  E-value=5.7e-24  Score=192.05  Aligned_cols=226  Identities=19%  Similarity=0.091  Sum_probs=161.1

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhh--hHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCC
Q 021960           29 LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGS--VLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGR  106 (305)
Q Consensus        29 l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~--~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~  106 (305)
                      |++|++|||||+|+||+++++.|+++|++|++++|+.....  .+.......++.++.+|++|.++++++++.+     +
T Consensus         1 m~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~   75 (345)
T 2z1m_A            1 MSGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNIIRTIEKV-----Q   75 (345)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCHHHHHHHHHHH-----C
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhccccCceeEEECCCCCHHHHHHHHHhc-----C
Confidence            45789999999999999999999999999999999765432  2222212346889999999999999888765     6


Q ss_pred             ccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccc-----------cC
Q 021960          107 LDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGV-----------MG  175 (305)
Q Consensus       107 id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~-----------~~  175 (305)
                      +|+||||||....        +.+.+++++.+++|+.++.++++++.+.   ...++||++||.+.+           .+
T Consensus        76 ~d~vih~A~~~~~--------~~~~~~~~~~~~~Nv~g~~~l~~a~~~~---~~~~~iv~~SS~~vyg~~~~~~~~e~~~  144 (345)
T 2z1m_A           76 PDEVYNLAAQSFV--------GVSFEQPILTAEVDAIGVLRILEALRTV---KPDTKFYQASTSEMFGKVQEIPQTEKTP  144 (345)
T ss_dssp             CSEEEECCCCCCH--------HHHTTSHHHHHHHHTHHHHHHHHHHHHH---CTTCEEEEEEEGGGGCSCSSSSBCTTSC
T ss_pred             CCEEEECCCCcch--------hhhhhCHHHHHHHHHHHHHHHHHHHHHh---CCCceEEEEechhhcCCCCCCCCCccCC
Confidence            9999999996421        1123467888999999999999998752   113799999998643           23


Q ss_pred             CCCCccchhhHHHHHHHHHHHHHHHC---cCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHH
Q 021960          176 GLGPHAYTASKHAIVGLTKNAACELG---RYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEE  252 (305)
Q Consensus       176 ~~~~~~Y~~sKaa~~~~~~~la~e~~---~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (305)
                      ......|+.+|++.+.+++.++.+++   ..++.++.+.||...|.+.....                       ..+..
T Consensus       145 ~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~~~-----------------------~~~~~  201 (345)
T 2z1m_A          145 FYPRSPYAVAKLFGHWITVNYREAYNMFACSGILFNHESPLRGIEFVTRKIT-----------------------YSLAR  201 (345)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHH-----------------------HHHHH
T ss_pred             CCCCChhHHHHHHHHHHHHHHHHHhCCceEeeeeeeecCCCCCCcchhHHHH-----------------------HHHHH
Confidence            34567899999999999999999875   33456677888887776522110                       00000


Q ss_pred             HHhh------c--CCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCcc
Q 021960          253 FVSG------L--GNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT  297 (305)
Q Consensus       253 ~~~~------~--~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~  297 (305)
                      ....      .  ......++.++|+|++++++++...    ++++++.+|..
T Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~v~Dva~a~~~~~~~~~----~~~~~i~~~~~  250 (345)
T 2z1m_A          202 IKYGLQDKLVLGNLNAKRDWGYAPEYVEAMWLMMQQPE----PDDYVIATGET  250 (345)
T ss_dssp             HHTTSCSCEEESCTTCEECCEEHHHHHHHHHHHHTSSS----CCCEEECCSCC
T ss_pred             HHcCCCCeeeeCCCCceeeeEEHHHHHHHHHHHHhCCC----CceEEEeCCCC
Confidence            0000      0  0112347789999999999998653    35677776643

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.92  E-value=6.5e-24  Score=191.70  Aligned_cols=239  Identities=16%  Similarity=0.118  Sum_probs=166.0

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc---CCCCeEEEEecCCCHHHHHHHHHHHHHhcCC
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL---APAPVTFVHCDVSLEEDIENLINSTVSRYGR  106 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~---~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~  106 (305)
                      .++++|||||+|+||+++++.|+++|++|++++|+........+.+   .+.++.++.+|++|.+++++++++     ++
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~   78 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDA-----HP   78 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHH-----SC
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhc-----cC
Confidence            4679999999999999999999999999999998765543322221   234588999999999999998875     37


Q ss_pred             ccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEeccccccc-----------C
Q 021960          107 LDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVM-----------G  175 (305)
Q Consensus       107 id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~-----------~  175 (305)
                      +|+||||||.....        ...+...+.+++|+.++.++++.+    .+.+.++||++||.+.+-           +
T Consensus        79 ~d~vih~A~~~~~~--------~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~  146 (341)
T 3enk_A           79 ITAAIHFAALKAVG--------ESVAKPIEYYRNNLDSLLSLLRVM----RERAVKRIVFSSSATVYGVPERSPIDETFP  146 (341)
T ss_dssp             CCEEEECCCCCCHH--------HHHHCHHHHHHHHHHHHHHHHHHH----HHTTCCEEEEEEEGGGBCSCSSSSBCTTSC
T ss_pred             CcEEEECccccccC--------ccccChHHHHHHHHHHHHHHHHHH----HhCCCCEEEEEecceEecCCCCCCCCCCCC
Confidence            99999999974321        123445678899999988776654    445668999999976652           1


Q ss_pred             CCCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHh
Q 021960          176 GLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVS  255 (305)
Q Consensus       176 ~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (305)
                      ......|+.+|++.+.+++.++.++.  +++++.++||.+..+.....+.....          +.+. ..+..+.....
T Consensus       147 ~~~~~~Y~~sK~~~e~~~~~~~~~~~--~~~~~~lRp~~v~G~~~~~~~g~~~~----------~~~~-~~~~~~~~~~~  213 (341)
T 3enk_A          147 LSATNPYGQTKLMAEQILRDVEAADP--SWRVATLRYFNPVGAHESGLIGEDPA----------GIPN-NLMPYVAQVAV  213 (341)
T ss_dssp             CBCSSHHHHHHHHHHHHHHHHHHHCT--TCEEEEEEECEEECCCTTSSCCCCCS----------SSCS-SHHHHHHHHHH
T ss_pred             CCCCChhHHHHHHHHHHHHHHhhcCC--CceEEEEeeccccCCccccccCCCcc----------cCcc-chHHHHHHHHh
Confidence            22346899999999999999998853  59999999999988743221111000          0000 00111111111


Q ss_pred             h---------------cCCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          256 G---------------LGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       256 ~---------------~~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      .               -+.....++.++|+|+++++++........|+++++++|...
T Consensus       214 ~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~  271 (341)
T 3enk_A          214 GKLEKLRVFGSDYPTPDGTGVRDYIHVVDLARGHIAALDALERRDASLTVNLGTGRGY  271 (341)
T ss_dssp             TSSSCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHHHTSCEEEEESCSCCE
T ss_pred             cCCCceEEeCCccCCCCCCeeEeeEEHHHHHHHHHHHHHhhhcCCcceEEEeCCCCce
Confidence            1               012223467889999999999875322346999999988654

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.92  E-value=5.1e-24  Score=183.12  Aligned_cols=203  Identities=16%  Similarity=0.115  Sum_probs=141.3

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHcC-CeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 021960           29 LEGKVAIITGGARGIGEAAVRLFARHG-AKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRL  107 (305)
Q Consensus        29 l~~k~vlVtGas~giG~~ia~~l~~~g-~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~i  107 (305)
                      +..|++|||||+|+||+++++.|+++| ++|++++|+.......    ...++.++.+|++|.++++++++       .+
T Consensus        21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~----~~~~~~~~~~Dl~d~~~~~~~~~-------~~   89 (236)
T 3qvo_A           21 GHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKP----YPTNSQIIMGDVLNHAALKQAMQ-------GQ   89 (236)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSS----CCTTEEEEECCTTCHHHHHHHHT-------TC
T ss_pred             CcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhccc----ccCCcEEEEecCCCHHHHHHHhc-------CC
Confidence            346899999999999999999999999 8999999986554322    23468999999999999988875       58


Q ss_pred             cEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCc-------
Q 021960          108 DILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPH-------  180 (305)
Q Consensus       108 d~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~-------  180 (305)
                      |+||||+|..            +..              ..++.+++.+.+.+.++||++||...+.+.+...       
T Consensus        90 D~vv~~a~~~------------~~~--------------~~~~~~~~~~~~~~~~~iV~iSS~~~~~~~~~~~~~~~~~~  143 (236)
T 3qvo_A           90 DIVYANLTGE------------DLD--------------IQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKFVEWNNAV  143 (236)
T ss_dssp             SEEEEECCST------------THH--------------HHHHHHHHHHHHTTCCEEEEECCCCC---------------
T ss_pred             CEEEEcCCCC------------chh--------------HHHHHHHHHHHHcCCCEEEEEecceecCCCCcccccchhhc
Confidence            9999999852            110              2245677778778888999999988766544321       


Q ss_pred             --cchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcC
Q 021960          181 --AYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLG  258 (305)
Q Consensus       181 --~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (305)
                        .+...+...       ..++.+.|++++.|+||++.++........                            ....
T Consensus       144 ~~~~~~~~~~~-------~~~l~~~gi~~~~vrPg~i~~~~~~~~~~~----------------------------~~~~  188 (236)
T 3qvo_A          144 IGEPLKPFRRA-------ADAIEASGLEYTILRPAWLTDEDIIDYELT----------------------------SRNE  188 (236)
T ss_dssp             -CGGGHHHHHH-------HHHHHTSCSEEEEEEECEEECCSCCCCEEE----------------------------CTTS
T ss_pred             ccchHHHHHHH-------HHHHHHCCCCEEEEeCCcccCCCCcceEEe----------------------------ccCC
Confidence              112222222       122346799999999999988753221100                            0001


Q ss_pred             CCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCcccc--ccccc
Q 021960          259 NLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTS--RNCVG  304 (305)
Q Consensus       259 ~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~--~~~~~  304 (305)
                      ...+++++++|+|++++++++++..++ |+++.++++.+..  ..|+|
T Consensus       189 ~~~~~~i~~~DvA~~i~~ll~~~~~~~-g~~~~i~~~~~~~~~~~~~~  235 (236)
T 3qvo_A          189 PFKGTIVSRKSVAALITDIIDKPEKHI-GENIGINQPGTDGDKPFFMG  235 (236)
T ss_dssp             CCSCSEEEHHHHHHHHHHHHHSTTTTT-TEEEEEECSSCCCCSSCCC-
T ss_pred             CCCCcEECHHHHHHHHHHHHcCccccc-CeeEEecCCCCCCCCCCccC
Confidence            123567899999999999999987666 9999999887654  34554

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.91  E-value=2.8e-24  Score=182.50  Aligned_cols=192  Identities=14%  Similarity=0.160  Sum_probs=153.5

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCC-HHHHHHHHHHHHHhcCCccEEE
Q 021960           33 VAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSL-EEDIENLINSTVSRYGRLDILY  111 (305)
Q Consensus        33 ~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d-~~~i~~~~~~~~~~~g~id~li  111 (305)
                      ++|||||+|+||+++++.|+++|++|++++|+.......      .++.++.+|++| .++++++++       .+|+||
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~~~~~D~~d~~~~~~~~~~-------~~d~vi   68 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY------NNVKAVHFDVDWTPEEMAKQLH-------GMDAII   68 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC------TTEEEEECCTTSCHHHHHTTTT-------TCSEEE
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc------CCceEEEecccCCHHHHHHHHc-------CCCEEE
Confidence            689999999999999999999999999999987543321      458999999999 888887764       699999


Q ss_pred             EcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCC-------Cccchh
Q 021960          112 NNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLG-------PHAYTA  184 (305)
Q Consensus       112 ~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~-------~~~Y~~  184 (305)
                      ||||....                ..+++|+.++.++++++.    +.+.++||++||..+..+.+.       ...|+.
T Consensus        69 ~~ag~~~~----------------~~~~~n~~~~~~l~~a~~----~~~~~~iv~~SS~~~~~~~~~~e~~~~~~~~Y~~  128 (219)
T 3dqp_A           69 NVSGSGGK----------------SLLKVDLYGAVKLMQAAE----KAEVKRFILLSTIFSLQPEKWIGAGFDALKDYYI  128 (219)
T ss_dssp             ECCCCTTS----------------SCCCCCCHHHHHHHHHHH----HTTCCEEEEECCTTTTCGGGCCSHHHHHTHHHHH
T ss_pred             ECCcCCCC----------------CcEeEeHHHHHHHHHHHH----HhCCCEEEEECcccccCCCcccccccccccHHHH
Confidence            99997531                145678888887777763    356679999999988776665       779999


Q ss_pred             hHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCC
Q 021960          185 SKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT  264 (305)
Q Consensus       185 sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (305)
                      +|.+.+.+++      ...+++++.++||.+.++.....+..                               +.....+
T Consensus       129 sK~~~e~~~~------~~~~i~~~ilrp~~v~g~~~~~~~~~-------------------------------~~~~~~~  171 (219)
T 3dqp_A          129 AKHFADLYLT------KETNLDYTIIQPGALTEEEATGLIDI-------------------------------NDEVSAS  171 (219)
T ss_dssp             HHHHHHHHHH------HSCCCEEEEEEECSEECSCCCSEEEE-------------------------------SSSCCCC
T ss_pred             HHHHHHHHHH------hccCCcEEEEeCceEecCCCCCcccc-------------------------------CCCcCCc
Confidence            9999999886      35689999999999988753222111                               1344567


Q ss_pred             CCHHHHHHHHHHhccCCCCceeccEEEecCCc
Q 021960          265 LRSKDIAEAALYLASDESRYVSGHNLVVDGGV  296 (305)
Q Consensus       265 ~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~  296 (305)
                      +.++|+|+.++++++++.  ..|+++++++|.
T Consensus       172 i~~~Dva~~i~~~l~~~~--~~g~~~~i~~g~  201 (219)
T 3dqp_A          172 NTIGDVADTIKELVMTDH--SIGKVISMHNGK  201 (219)
T ss_dssp             EEHHHHHHHHHHHHTCGG--GTTEEEEEEECS
T ss_pred             ccHHHHHHHHHHHHhCcc--ccCcEEEeCCCC
Confidence            899999999999998753  459999998775

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.91  E-value=1.3e-23  Score=189.51  Aligned_cols=231  Identities=14%  Similarity=0.073  Sum_probs=164.4

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc---CCCCeEEE-EecCCCHHHHHHHHHHHH
Q 021960           26 HRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL---APAPVTFV-HCDVSLEEDIENLINSTV  101 (305)
Q Consensus        26 ~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~---~~~~v~~~-~~D~~d~~~i~~~~~~~~  101 (305)
                      ...++++++|||||+|+||+++++.|+++|++|++++|+......+...+   .+.++.++ .+|++|.++++++++   
T Consensus         6 ~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---   82 (342)
T 1y1p_A            6 AVLPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIK---   82 (342)
T ss_dssp             CSSCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTT---
T ss_pred             ccCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHc---
Confidence            34567899999999999999999999999999999999765544333221   12458888 899999888776654   


Q ss_pred             HhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEeccccccc-CC----
Q 021960          102 SRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVM-GG----  176 (305)
Q Consensus       102 ~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~-~~----  176 (305)
                          .+|+||||||.....           +++++.+++|+.++.++++++.+   ..+.++||++||.+.+. +.    
T Consensus        83 ----~~d~vih~A~~~~~~-----------~~~~~~~~~n~~g~~~ll~~~~~---~~~~~~iv~~SS~~~~~~~~~~~~  144 (342)
T 1y1p_A           83 ----GAAGVAHIASVVSFS-----------NKYDEVVTPAIGGTLNALRAAAA---TPSVKRFVLTSSTVSALIPKPNVE  144 (342)
T ss_dssp             ----TCSEEEECCCCCSCC-----------SCHHHHHHHHHHHHHHHHHHHHT---CTTCCEEEEECCGGGTCCCCTTCC
T ss_pred             ----CCCEEEEeCCCCCCC-----------CCHHHHHHHHHHHHHHHHHHHHh---CCCCcEEEEeccHHHhcCCCCCCC
Confidence                699999999975321           23567899999999998888764   23457999999987652 21    


Q ss_pred             --------------------------CCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCC
Q 021960          177 --------------------------LGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDG  230 (305)
Q Consensus       177 --------------------------~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~  230 (305)
                                                .....|+.+|++.+.+++.++.+++. ++++++++||.+.+++.......    
T Consensus       145 ~~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~-~~~~~~~rp~~v~g~~~~~~~~~----  219 (342)
T 1y1p_A          145 GIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKP-HFTLNAVLPNYTIGTIFDPETQS----  219 (342)
T ss_dssp             CCEECTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCC-SSEEEEEEESEEECCCSCTTTCC----
T ss_pred             CcccCccccCchhhhhhccccccccccchHHHHHHHHHHHHHHHHHHHhcCC-CceEEEEcCCceECCCCCCCCCC----
Confidence                                      12357999999999999999999865 89999999999999864321000    


Q ss_pred             chhhhhhccCCCcHHHHHHHHH-----HHhhcCCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCc
Q 021960          231 EEEDECMNFGIPSQKEVRKMEE-----FVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGV  296 (305)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~  296 (305)
                      ..          ....+..+..     ...  ..+...++.++|+|+++++++...  ..+|+.+..+|+.
T Consensus       220 ~~----------~~~~~~~~~~~~~~~~~~--~~~~~~~v~v~Dva~a~~~~~~~~--~~~g~~~~~~g~~  276 (342)
T 1y1p_A          220 GS----------TSGWMMSLFNGEVSPALA--LMPPQYYVSAVDIGLLHLGCLVLP--QIERRRVYGTAGT  276 (342)
T ss_dssp             CH----------HHHHHHHHHTTCCCHHHH--TCCSEEEEEHHHHHHHHHHHHHCT--TCCSCEEEECCEE
T ss_pred             cc----------HHHHHHHHHcCCCccccc--cCCcCCEeEHHHHHHHHHHHHcCc--ccCCceEEEeCCC
Confidence            00          0011111100     000  013446789999999999998753  3568777666653

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.91  E-value=6.8e-23  Score=186.34  Aligned_cols=231  Identities=15%  Similarity=0.037  Sum_probs=166.7

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc-CCCCeEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 021960           29 LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL-APAPVTFVHCDVSLEEDIENLINSTVSRYGRL  107 (305)
Q Consensus        29 l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~-~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~i  107 (305)
                      ++++++|||||+|+||++++++|+++|++|++++|+..........+ ...++.++.+|++|.+++.++++..     ++
T Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~   81 (357)
T 1rkx_A            7 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREF-----QP   81 (357)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHH-----CC
T ss_pred             hCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHHHHHhc-----CC
Confidence            56789999999999999999999999999999999765443332221 1346889999999999999888765     69


Q ss_pred             cEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEeccccccc------------C
Q 021960          108 DILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVM------------G  175 (305)
Q Consensus       108 d~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~------------~  175 (305)
                      |+||||||...        .+.+.+++++.+++|+.++.++++++.+.   ...++||++||.+.+-            +
T Consensus        82 d~vih~A~~~~--------~~~~~~~~~~~~~~n~~~~~~l~~a~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~E~~~  150 (357)
T 1rkx_A           82 EIVFHMAAQPL--------VRLSYSEPVETYSTNVMGTVYLLEAIRHV---GGVKAVVNITSDKCYDNKEWIWGYRENEA  150 (357)
T ss_dssp             SEEEECCSCCC--------HHHHHHCHHHHHHHHTHHHHHHHHHHHHH---CCCCEEEEECCGGGBCCCCSSSCBCTTSC
T ss_pred             CEEEECCCCcc--------cccchhCHHHHHHHHHHHHHHHHHHHHHh---CCCCeEEEecCHHHhCCCCcCCCCCCCCC
Confidence            99999999531        12245667889999999999999998662   2357999999986432            2


Q ss_pred             CCCCccchhhHHHHHHHHHHHHHHHC------cCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHH-
Q 021960          176 GLGPHAYTASKHAIVGLTKNAACELG------RYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVR-  248 (305)
Q Consensus       176 ~~~~~~Y~~sKaa~~~~~~~la~e~~------~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  248 (305)
                      ......|+.+|.+.+.+++.++.++.      +.++++++++||.+.++....   .                 ...+. 
T Consensus       151 ~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~---~-----------------~~~~~~  210 (357)
T 1rkx_A          151 MGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWA---L-----------------DRIVPD  210 (357)
T ss_dssp             BCCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCC---S-----------------SCHHHH
T ss_pred             CCCCCccHHHHHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCc---c-----------------ccHHHH
Confidence            23457899999999999999999875      458999999999999874210   0                 00000 


Q ss_pred             HHHHHHhhc------CCCCCCCCCHHHHHHHHHHhccCC--CCceeccEEEecCC
Q 021960          249 KMEEFVSGL------GNLKGTTLRSKDIAEAALYLASDE--SRYVSGHNLVVDGG  295 (305)
Q Consensus       249 ~~~~~~~~~------~~~~~~~~~~~dva~~v~~l~s~~--~~~~tG~~i~idgG  295 (305)
                      .+.......      +.....++.++|+|++++.++...  .....|+++++.+|
T Consensus       211 ~~~~~~~g~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~~~~~ni~~~  265 (357)
T 1rkx_A          211 ILRAFEQSQPVIIRNPHAIRPWQHVLEPLSGYLLLAQKLYTDGAEYAEGWNFGPN  265 (357)
T ss_dssp             HHHHHHTTCCEECSCTTCEECCEETHHHHHHHHHHHHHHHHTCGGGCSEEECCCC
T ss_pred             HHHHHhcCCCEEECCCCCeeccEeHHHHHHHHHHHHHhhhhcCCCCCceEEECCC
Confidence            111111110      112234678999999999887631  11135788888764

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.90  E-value=2.1e-22  Score=168.61  Aligned_cols=199  Identities=14%  Similarity=0.118  Sum_probs=147.2

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDI  109 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~  109 (305)
                      ++++++||||+|+||+++++.|+++|++|++++|+.......    ...++.++.+|++|.+++.++++       .+|+
T Consensus         2 ~~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~-------~~d~   70 (206)
T 1hdo_A            2 AVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE----GPRPAHVVVGDVLQAADVDKTVA-------GQDA   70 (206)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS----SCCCSEEEESCTTSHHHHHHHHT-------TCSE
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccc----cCCceEEEEecCCCHHHHHHHHc-------CCCE
Confidence            347899999999999999999999999999999986543211    13458899999999998887764       5899


Q ss_pred             EEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCC----CCccchhh
Q 021960          110 LYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGL----GPHAYTAS  185 (305)
Q Consensus       110 li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~----~~~~Y~~s  185 (305)
                      ||||||.....       +.        .++|+.++..+++.+..    .+.++||++||...+...+    ....|+.+
T Consensus        71 vi~~a~~~~~~-------~~--------~~~n~~~~~~~~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~y~~~  131 (206)
T 1hdo_A           71 VIVLLGTRNDL-------SP--------TTVMSEGARNIVAAMKA----HGVDKVVACTSAFLLWDPTKVPPRLQAVTDD  131 (206)
T ss_dssp             EEECCCCTTCC-------SC--------CCHHHHHHHHHHHHHHH----HTCCEEEEECCGGGTSCTTCSCGGGHHHHHH
T ss_pred             EEECccCCCCC-------Cc--------cchHHHHHHHHHHHHHH----hCCCeEEEEeeeeeccCcccccccchhHHHH
Confidence            99999965320       11        12677777666666543    4567999999987665444    56789999


Q ss_pred             HHHHHHHHHHHHHHHCcCCcEEEEEeCCcc-ccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCC
Q 021960          186 KHAIVGLTKNAACELGRYGIRVNCISPFGV-ATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT  264 (305)
Q Consensus       186 Kaa~~~~~~~la~e~~~~~i~v~~v~PG~v-~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (305)
                      |.+++.+++.       .+++++.++||.+ .+++.......            .               .  ..+.+.+
T Consensus       132 K~~~e~~~~~-------~~i~~~~lrp~~~~~~~~~~~~~~~------------~---------------~--~~~~~~~  175 (206)
T 1hdo_A          132 HIRMHKVLRE-------SGLKYVAVMPPHIGDQPLTGAYTVT------------L---------------D--GRGPSRV  175 (206)
T ss_dssp             HHHHHHHHHH-------TCSEEEEECCSEEECCCCCSCCEEE------------S---------------S--SCSSCSE
T ss_pred             HHHHHHHHHh-------CCCCEEEEeCCcccCCCCCcceEec------------c---------------c--CCCCCCc
Confidence            9999998742       5899999999998 33321110000            0               0  1121467


Q ss_pred             CCHHHHHHHHHHhccCCCCceeccEEEecCCc
Q 021960          265 LRSKDIAEAALYLASDESRYVSGHNLVVDGGV  296 (305)
Q Consensus       265 ~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~  296 (305)
                      ++++|+|+.++++++++.  .+|++++++||.
T Consensus       176 i~~~Dva~~~~~~~~~~~--~~g~~~~i~~g~  205 (206)
T 1hdo_A          176 ISKHDLGHFMLRCLTTDE--YDGHSTYPSHQY  205 (206)
T ss_dssp             EEHHHHHHHHHHTTSCST--TTTCEEEEECCC
T ss_pred             cCHHHHHHHHHHHhcCcc--ccccceeeeccc
Confidence            899999999999998753  689999999985

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.90  E-value=1.8e-23  Score=180.58  Aligned_cols=218  Identities=12%  Similarity=0.036  Sum_probs=154.4

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHc--CCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCC
Q 021960           29 LEGKVAIITGGARGIGEAAVRLFARH--GAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGR  106 (305)
Q Consensus        29 l~~k~vlVtGas~giG~~ia~~l~~~--g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~  106 (305)
                      ++++++|||||+|+||+++++.|+++  |++|++++|+......+     ..++.++.+|++|.++++++++       .
T Consensus         2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~-----~~~~~~~~~D~~d~~~~~~~~~-------~   69 (253)
T 1xq6_A            2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI-----GGEADVFIGDITDADSINPAFQ-------G   69 (253)
T ss_dssp             CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT-----TCCTTEEECCTTSHHHHHHHHT-------T
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc-----CCCeeEEEecCCCHHHHHHHHc-------C
Confidence            45789999999999999999999999  89999999986543322     3357789999999999888775       5


Q ss_pred             ccEEEEcCCCCCCCCC-----CCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCc-
Q 021960          107 LDILYNNAGVLGNQRK-----HKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPH-  180 (305)
Q Consensus       107 id~li~nag~~~~~~~-----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~-  180 (305)
                      +|+||||||.......     .....+.+.+.+.+.+++|+.++.++++.+.+    .+.++||++||..+..+..... 
T Consensus        70 ~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~iv~~SS~~~~~~~~~~~~  145 (253)
T 1xq6_A           70 IDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKV----AGVKHIVVVGSMGGTNPDHPLNK  145 (253)
T ss_dssp             CSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHH----HTCSEEEEEEETTTTCTTCGGGG
T ss_pred             CCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHH----cCCCEEEEEcCccCCCCCCcccc
Confidence            8999999997532100     00001122344556789999998888877654    4567999999988765443333 


Q ss_pred             ----cchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhh
Q 021960          181 ----AYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSG  256 (305)
Q Consensus       181 ----~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (305)
                          .|+.+|.+++.+++.       .|++++.|+||.+.++.....  .    .    ......          ...  
T Consensus       146 ~~~~~y~~sK~~~e~~~~~-------~~i~~~~vrpg~v~~~~~~~~--~----~----~~~~~~----------~~~--  196 (253)
T 1xq6_A          146 LGNGNILVWKRKAEQYLAD-------SGTPYTIIRAGGLLDKEGGVR--E----L----LVGKDD----------ELL--  196 (253)
T ss_dssp             GGGCCHHHHHHHHHHHHHT-------SSSCEEEEEECEEECSCSSSS--C----E----EEESTT----------GGG--
T ss_pred             ccchhHHHHHHHHHHHHHh-------CCCceEEEecceeecCCcchh--h----h----hccCCc----------CCc--
Confidence                355699999888752       689999999999998863210  0    0    000000          000  


Q ss_pred             cCCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCC
Q 021960          257 LGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGG  295 (305)
Q Consensus       257 ~~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG  295 (305)
                        .....++.++|+|+.+++++++..  .+|+++++++|
T Consensus       197 --~~~~~~~~~~Dva~~~~~~~~~~~--~~g~~~~i~~~  231 (253)
T 1xq6_A          197 --QTDTKTVPRADVAEVCIQALLFEE--AKNKAFDLGSK  231 (253)
T ss_dssp             --GSSCCEEEHHHHHHHHHHHTTCGG--GTTEEEEEEEC
T ss_pred             --CCCCcEEcHHHHHHHHHHHHcCcc--ccCCEEEecCC
Confidence              012456789999999999998643  47999999986

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=99.90  E-value=8.8e-23  Score=182.15  Aligned_cols=223  Identities=17%  Similarity=0.094  Sum_probs=157.7

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEEEE
Q 021960           33 VAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILYN  112 (305)
Q Consensus        33 ~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~li~  112 (305)
                      ++|||||+|+||+++++.|+++|++|++++|.......   .. ..++.++.+|++|.+++++++++.     .+|+|||
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~---~~-~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~vi~   72 (311)
T 2p5y_A            2 RVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRE---NV-PKGVPFFRVDLRDKEGVERAFREF-----RPTHVSH   72 (311)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGG---GS-CTTCCEECCCTTCHHHHHHHHHHH-----CCSEEEE
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchh---hc-ccCeEEEECCCCCHHHHHHHHHhc-----CCCEEEE
Confidence            68999999999999999999999999999885332111   11 134678899999999998887643     6999999


Q ss_pred             cCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCC-------------CCC
Q 021960          113 NAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGG-------------LGP  179 (305)
Q Consensus       113 nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~-------------~~~  179 (305)
                      +|+....        ..+.+++++.+++|+.++.++++++..    .+.++||++||.++..+.             ...
T Consensus        73 ~a~~~~~--------~~~~~~~~~~~~~N~~g~~~l~~a~~~----~~~~~iv~~SS~~~~~g~~~~~~~~~E~~~~~~~  140 (311)
T 2p5y_A           73 QAAQASV--------KVSVEDPVLDFEVNLLGGLNLLEACRQ----YGVEKLVFASTGGAIYGEVPEGERAEETWPPRPK  140 (311)
T ss_dssp             CCSCCCH--------HHHHHCHHHHHHHHTHHHHHHHHHHHH----TTCSEEEEEEEHHHHHCCCCTTCCBCTTSCCCCC
T ss_pred             CccccCc--------hhhhhCHHHHHHHHHHHHHHHHHHHHH----hCCCEEEEeCCChhhcCCCCCCCCcCCCCCCCCC
Confidence            9996421        124466788999999999999888753    456799999998322211             235


Q ss_pred             ccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHH--h--
Q 021960          180 HAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFV--S--  255 (305)
Q Consensus       180 ~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--  255 (305)
                      ..|+.+|++.+.+++.++.++   +++++.++||.+.++........     ..         ....++.+..-.  .  
T Consensus       141 ~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~Gp~~~~~~~~-----~~---------~~~~~~~~~~~~~~~~~  203 (311)
T 2p5y_A          141 SPYAASKAAFEHYLSVYGQSY---GLKWVSLRYGNVYGPRQDPHGEA-----GV---------VAIFAERVLKGLPVTLY  203 (311)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTTCCSSSTT-----HH---------HHHHHHHHHHTCCEEEE
T ss_pred             ChHHHHHHHHHHHHHHHHHHc---CCCEEEEeeccccCcCCCCCCcC-----cH---------HHHHHHHHHcCCCcEEE
Confidence            689999999999999998875   79999999999988753210000     00         000111111100  0  


Q ss_pred             -----hcCCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          256 -----GLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       256 -----~~~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                           .-+.....++.++|+|++++++++..     |+++++++|...
T Consensus       204 ~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~-----~~~~~i~~~~~~  246 (311)
T 2p5y_A          204 ARKTPGDEGCVRDYVYVGDVAEAHALALFSL-----EGIYNVGTGEGH  246 (311)
T ss_dssp             CSSSTTSCCCEECEEEHHHHHHHHHHHHHHC-----CEEEEESCSCCE
T ss_pred             ecccCCCCCeEEeeEEHHHHHHHHHHHHhCC-----CCEEEeCCCCCc
Confidence                 00112335678999999999998763     889999988644

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=99.90  E-value=2.7e-22  Score=182.10  Aligned_cols=234  Identities=16%  Similarity=0.016  Sum_probs=166.0

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcch----hhhHhhhcC---CCCeEEEEecCCCHHHHHHHHHHHH
Q 021960           29 LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTL----GSVLASTLA---PAPVTFVHCDVSLEEDIENLINSTV  101 (305)
Q Consensus        29 l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~----~~~~~~~~~---~~~v~~~~~D~~d~~~i~~~~~~~~  101 (305)
                      ++++++|||||+|+||+++++.|+++|++|++++|+...    ...+.+.+.   ..++.++.+|++|.++++++++   
T Consensus        25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---  101 (352)
T 1sb8_A           25 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA---  101 (352)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT---
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhc---
Confidence            467899999999999999999999999999999986532    121211111   2458899999999998888775   


Q ss_pred             HhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCC----
Q 021960          102 SRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGL----  177 (305)
Q Consensus       102 ~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~----  177 (305)
                          .+|+|||+||....        ..+.+++++.+++|+.++.++++++.+    .+.++||++||.+.+.+.+    
T Consensus       102 ----~~d~vih~A~~~~~--------~~~~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~~v~~SS~~~~~~~~~~~~  165 (352)
T 1sb8_A          102 ----GVDYVLHQAALGSV--------PRSINDPITSNATNIDGFLNMLIAARD----AKVQSFTYAASSSTYGDHPGLPK  165 (352)
T ss_dssp             ----TCSEEEECCSCCCH--------HHHHHCHHHHHHHHTHHHHHHHHHHHH----TTCSEEEEEEEGGGGTTCCCSSB
T ss_pred             ----CCCEEEECCcccCc--------hhhhhCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEeccHHhcCCCCCCCC
Confidence                69999999996421        013456788999999999999988765    4567999999987764432    


Q ss_pred             -------CCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHH
Q 021960          178 -------GPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKM  250 (305)
Q Consensus       178 -------~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (305)
                             ....|+.+|++.+.+++.++.++   +++++.++||.+.++........  ..           .....+..+
T Consensus       166 ~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~--~~-----------~~~~~~~~~  229 (352)
T 1sb8_A          166 VEDTIGKPLSPYAVTKYVNELYADVFSRCY---GFSTIGLRYFNVFGRRQDPNGAY--AA-----------VIPKWTSSM  229 (352)
T ss_dssp             CTTCCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECCEECTTCCCCSTT--CC-----------HHHHHHHHH
T ss_pred             CCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEEECceeCcCCCCCcch--hh-----------HHHHHHHHH
Confidence                   35689999999999999999885   79999999999988753211000  00           000111111


Q ss_pred             HHHHh--hc--CCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          251 EEFVS--GL--GNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       251 ~~~~~--~~--~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      ..-..  ..  +.....++.++|+|+++++++... ....|+++++.+|...
T Consensus       230 ~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~-~~~~~~~~ni~~~~~~  280 (352)
T 1sb8_A          230 IQGDDVYINGDGETSRDFCYIENTVQANLLAATAG-LDARNQVYNIAVGGRT  280 (352)
T ss_dssp             HHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTCC-GGGCSEEEEESCSCCE
T ss_pred             HCCCCcEEeCCCCceEeeEEHHHHHHHHHHHHhcc-ccCCCceEEeCCCCCc
Confidence            11000  00  112235678999999999988752 2357999999988643

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=99.90  E-value=1.5e-22  Score=185.91  Aligned_cols=251  Identities=16%  Similarity=0.059  Sum_probs=165.6

Q ss_pred             CCCCCcCcceeeeccCCCCC-CCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEE
Q 021960            6 MPETNLQGIHVLAWDDAPPS-HRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVH   84 (305)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~-~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~   84 (305)
                      |-+.++.......|...... .....++++|||||+|+||+++++.|+++|++|++++|+........    ..++.++.
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~v~~~~   78 (379)
T 2c5a_A            3 MGTTNGTDYGAYTYKELEREQYWPSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTED----MFCDEFHL   78 (379)
T ss_dssp             ------------CCTTCCCCCSCTTSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGG----GTCSEEEE
T ss_pred             CCccCCcchhhhhHHHHhccccccccCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhhc----cCCceEEE
Confidence            44556666666666443222 22335689999999999999999999999999999999765432211    23578899


Q ss_pred             ecCCCHHHHHHHHHHHHHhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEE
Q 021960           85 CDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCI  164 (305)
Q Consensus        85 ~D~~d~~~i~~~~~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~i  164 (305)
                      +|++|.++++++++       .+|+|||+||....    ..   .+.+++++.+++|+.++.++++++..    .+.++|
T Consensus        79 ~Dl~d~~~~~~~~~-------~~d~Vih~A~~~~~----~~---~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~~~~~  140 (379)
T 2c5a_A           79 VDLRVMENCLKVTE-------GVDHVFNLAADMGG----MG---FIQSNHSVIMYNNTMISFNMIEAARI----NGIKRF  140 (379)
T ss_dssp             CCTTSHHHHHHHHT-------TCSEEEECCCCCCC----HH---HHTTCHHHHHHHHHHHHHHHHHHHHH----TTCSEE
T ss_pred             CCCCCHHHHHHHhC-------CCCEEEECceecCc----cc---ccccCHHHHHHHHHHHHHHHHHHHHH----cCCCEE
Confidence            99999998888764       69999999996422    01   11245678899999999998888754    455799


Q ss_pred             EEeccccccc------------------CCCCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccC
Q 021960          165 ISTASVAGVM------------------GGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRN  226 (305)
Q Consensus       165 v~isS~~~~~------------------~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~  226 (305)
                      |++||.+.+.                  +......|+.+|.+.+.+++.++.++   +++++.++||.+.++........
T Consensus       141 V~~SS~~v~~~~~~~~~~~~~~~E~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~G~~~~~~~~~  217 (379)
T 2c5a_A          141 FYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDF---GIECRIGRFHNIYGPFGTWKGGR  217 (379)
T ss_dssp             EEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCCSSSC
T ss_pred             EEEeehheeCCCCCCCccCCCcCcccCCCCCCCChhHHHHHHHHHHHHHHHHHH---CCCEEEEEeCceeCcCCCccccc
Confidence            9999976543                  22345689999999999999998774   79999999999988753210000


Q ss_pred             CCCCchhhhhhccCCCcHHHHHHHHHH---Hhhc--CCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          227 SGDGEEEDECMNFGIPSQKEVRKMEEF---VSGL--GNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~--~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                        ..           .....+..+..-   ...+  +.....++.++|+|++++++++..    .|+++++.+|...
T Consensus       218 --~~-----------~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~----~~~~~ni~~~~~~  277 (379)
T 2c5a_A          218 --EK-----------APAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEMV  277 (379)
T ss_dssp             --CC-----------HHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHHHHHHHSS----CCSCEEECCCCCE
T ss_pred             --cc-----------HHHHHHHHHHhCCCceEEeCCCCeeEEEEEHHHHHHHHHHHhhcc----CCCeEEeCCCCcc
Confidence              00           000111111110   0000  112335678999999999999765    4778999887543

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=99.90  E-value=1.4e-22  Score=183.50  Aligned_cols=223  Identities=15%  Similarity=0.110  Sum_probs=161.3

Q ss_pred             CEEEEecCCCchHHHHHHHHHHc--CCeEEEEecCcch--hhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 021960           32 KVAIITGGARGIGEAAVRLFARH--GAKVVIADVEDTL--GSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRL  107 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~--g~~vv~~~r~~~~--~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~i  107 (305)
                      +++|||||+|+||+++++.|+++  |++|++++|+...  ...+ ..+...++.++.+|++|.++++++++       .+
T Consensus         5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   76 (348)
T 1oc2_A            5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANL-EAILGDRVELVVGDIADAELVDKLAA-------KA   76 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGT-GGGCSSSEEEEECCTTCHHHHHHHHT-------TC
T ss_pred             cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHH-hhhccCCeEEEECCCCCHHHHHHHhh-------cC
Confidence            68999999999999999999999  8999999886421  1111 12223568999999999988887765       46


Q ss_pred             cEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEeccccccc-------------
Q 021960          108 DILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVM-------------  174 (305)
Q Consensus       108 d~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~-------------  174 (305)
                      |+|||+||....        +.+.+++++.+++|+.++.++++++.+.    + ++||++||.+.+-             
T Consensus        77 d~vih~A~~~~~--------~~~~~~~~~~~~~Nv~g~~~l~~a~~~~----~-~~~v~~SS~~vyg~~~~~~~~~~~~~  143 (348)
T 1oc2_A           77 DAIVHYAAESHN--------DNSLNDPSPFIHTNFIGTYTLLEAARKY----D-IRFHHVSTDEVYGDLPLREDLPGHGE  143 (348)
T ss_dssp             SEEEECCSCCCH--------HHHHHCCHHHHHHHTHHHHHHHHHHHHH----T-CEEEEEEEGGGGCCBCCGGGSTTTTC
T ss_pred             CEEEECCcccCc--------cchhhCHHHHHHHHHHHHHHHHHHHHHh----C-CeEEEecccceeCCCccccccccccc
Confidence            999999996421        1234567788999999999999998764    3 3999999976431             


Q ss_pred             ----------CCCCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcH
Q 021960          175 ----------GGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQ  244 (305)
Q Consensus       175 ----------~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (305)
                                +......|+.+|++.+.+++.++.++   +++++.++||.+.++.....  .      .         ..
T Consensus       144 ~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ilrp~~v~G~~~~~~--~------~---------~~  203 (348)
T 1oc2_A          144 GPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF---GVKATISNCSNNYGPYQHIE--K------F---------IP  203 (348)
T ss_dssp             STTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEESTTCCTT--S------H---------HH
T ss_pred             ccCCCcCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCCEEEEeeceeeCCCCCcc--c------h---------HH
Confidence                      22345689999999999999999885   79999999999988763110  0      0         00


Q ss_pred             HHHHHHHHHH--h--hcCCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          245 KEVRKMEEFV--S--GLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       245 ~~~~~~~~~~--~--~~~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      ..+..+..-.  .  ..+.....++.++|+|+++++++++.   .+|+++++++|...
T Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~---~~g~~~~i~~~~~~  258 (348)
T 1oc2_A          204 RQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAILTKG---RMGETYLIGADGEK  258 (348)
T ss_dssp             HHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHHHHHHHHC---CTTCEEEECCSCEE
T ss_pred             HHHHHHHcCCCceEecCCCceEeeEEHHHHHHHHHHHhhCC---CCCCeEEeCCCCCC
Confidence            1111111100  0  00112335678999999999999764   47999999998643

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=99.90  E-value=6.2e-22  Score=179.12  Aligned_cols=228  Identities=14%  Similarity=0.029  Sum_probs=159.6

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcC--CeEEEEecCcch--hhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHh
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHG--AKVVIADVEDTL--GSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSR  103 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g--~~vv~~~r~~~~--~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~  103 (305)
                      .+++++||||||+|+||+++++.|+++|  +.|+..+|....  ...+.......++.++.+|++|.++++++++..   
T Consensus        21 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---   97 (346)
T 4egb_A           21 QSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGELLEHVIKER---   97 (346)
T ss_dssp             ---CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHH---
T ss_pred             ccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhhccCCCeEEEEcCCCCHHHHHHHHhhc---
Confidence            4568899999999999999999999999  667777765422  222222223357999999999999999988764   


Q ss_pred             cCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCC------
Q 021960          104 YGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGL------  177 (305)
Q Consensus       104 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~------  177 (305)
                        ++|+|||+||....        ....+++++.+++|+.++.++++++..    .+..+||++||.+.+...+      
T Consensus        98 --~~d~Vih~A~~~~~--------~~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~v~~SS~~vy~~~~~~~~~~  163 (346)
T 4egb_A           98 --DVQVIVNFAAESHV--------DRSIENPIPFYDTNVIGTVTLLELVKK----YPHIKLVQVSTDEVYGSLGKTGRFT  163 (346)
T ss_dssp             --TCCEEEECCCCC-----------------CHHHHHHTHHHHHHHHHHHH----STTSEEEEEEEGGGGCCCCSSCCBC
T ss_pred             --CCCEEEECCcccch--------hhhhhCHHHHHHHHHHHHHHHHHHHHh----cCCCEEEEeCchHHhCCCCcCCCcC
Confidence              69999999997532        124466788899999999888887754    4567899999976554321      


Q ss_pred             ------CCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHH
Q 021960          178 ------GPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKME  251 (305)
Q Consensus       178 ------~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (305)
                            ....|+.+|.+.+.+++.++.+.   +++++.++||.+.++.....                    ......+.
T Consensus       164 E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~--------------------~~~~~~~~  220 (346)
T 4egb_A          164 EETPLAPNSPYSSSKASADMIALAYYKTY---QLPVIVTRCSNNYGPYQYPE--------------------KLIPLMVT  220 (346)
T ss_dssp             TTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTTCCTT--------------------SHHHHHHH
T ss_pred             CCCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeecceeCcCCCcc--------------------chHHHHHH
Confidence                  23689999999999999998874   79999999999988742110                    00000111


Q ss_pred             HHHhhc-------CCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          252 EFVSGL-------GNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       252 ~~~~~~-------~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      ......       +.....++.++|+|+++++++....   .|+++++.+|...
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~---~g~~~~i~~~~~~  271 (346)
T 4egb_A          221 NALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVVLHKGR---VGEVYNIGGNNEK  271 (346)
T ss_dssp             HHHTTCCCEEETTSCCEECEEEHHHHHHHHHHHHHHCC---TTCEEEECCSCCE
T ss_pred             HHHcCCCceeeCCCCeEEeeEEHHHHHHHHHHHHhcCC---CCCEEEECCCCce
Confidence            111110       1122244679999999999998764   7999999998643

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=99.90  E-value=1.7e-22  Score=182.29  Aligned_cols=212  Identities=13%  Similarity=0.070  Sum_probs=153.5

Q ss_pred             CEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEEE
Q 021960           32 KVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILY  111 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~li  111 (305)
                      +++|||||+|+||++++++|+++|++|++++|+......+.    ..++.++.+|++|.++++++++       .+|+||
T Consensus        14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~----~~~~~~~~~Dl~d~~~~~~~~~-------~~d~vi   82 (342)
T 2x4g_A           14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLA----YLEPECRVAEMLDHAGLERALR-------GLDGVI   82 (342)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGG----GGCCEEEECCTTCHHHHHHHTT-------TCSEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhc----cCCeEEEEecCCCHHHHHHHHc-------CCCEEE
Confidence            48999999999999999999999999999999865543322    1247889999999988887764       599999


Q ss_pred             EcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCC-------------
Q 021960          112 NNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLG-------------  178 (305)
Q Consensus       112 ~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~-------------  178 (305)
                      |+||...          .+.+++++.+++|+.++.++++++.+.    +.++||++||.+.+.+.+.             
T Consensus        83 h~a~~~~----------~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~~~~v~~SS~~~~~~~~~~~~~~E~~~~~p~  148 (342)
T 2x4g_A           83 FSAGYYP----------SRPRRWQEEVASALGQTNPFYAACLQA----RVPRILYVGSAYAMPRHPQGLPGHEGLFYDSL  148 (342)
T ss_dssp             EC----------------------CHHHHHHHHHHHHHHHHHHH----TCSCEEEECCGGGSCCCTTSSCBCTTCCCSSC
T ss_pred             ECCccCc----------CCCCCHHHHHHHHHHHHHHHHHHHHHc----CCCeEEEECCHHhhCcCCCCCCCCCCCCCCcc
Confidence            9999642          133567788999999999999988763    4578999999887654433             


Q ss_pred             ---CccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHh
Q 021960          179 ---PHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVS  255 (305)
Q Consensus       179 ---~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (305)
                         ...|+.+|.+.+.+++.++.   + |++++.++||.+.++....   . .            .  ...+..+   ..
T Consensus       149 ~~~~~~Y~~sK~~~e~~~~~~~~---~-g~~~~ilrp~~v~g~~~~~---~-~------------~--~~~~~~~---~~  203 (342)
T 2x4g_A          149 PSGKSSYVLCKWALDEQAREQAR---N-GLPVVIGIPGMVLGELDIG---P-T------------T--GRVITAI---GN  203 (342)
T ss_dssp             CTTSCHHHHHHHHHHHHHHHHHH---T-TCCEEEEEECEEECSCCSS---C-S------------T--THHHHHH---HT
T ss_pred             ccccChHHHHHHHHHHHHHHHhh---c-CCcEEEEeCCceECCCCcc---c-c------------H--HHHHHHH---Hc
Confidence               67899999999999999876   3 8999999999998875310   0 0            0  0111111   11


Q ss_pred             hcC----CCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCc
Q 021960          256 GLG----NLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGV  296 (305)
Q Consensus       256 ~~~----~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~  296 (305)
                      ...    .....++.++|+|+++++++++..   .|+++++++|.
T Consensus       204 ~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~---~g~~~~v~~~~  245 (342)
T 2x4g_A          204 GEMTHYVAGQRNVIDAAEAGRGLLMALERGR---IGERYLLTGHN  245 (342)
T ss_dssp             TCCCEEECCEEEEEEHHHHHHHHHHHHHHSC---TTCEEEECCEE
T ss_pred             CCCccccCCCcceeeHHHHHHHHHHHHhCCC---CCceEEEcCCc
Confidence            100    112236789999999999998653   28999999986

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.89  E-value=3.1e-22  Score=180.53  Aligned_cols=219  Identities=17%  Similarity=0.079  Sum_probs=152.5

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRL  107 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~i  107 (305)
                      .++++++|||||+|+||+++++.|+++|++|++++|+..........+  .++.++.+|++|.++++++++..     ++
T Consensus        18 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~~--~~~~~~~~Dl~d~~~~~~~~~~~-----~~   90 (333)
T 2q1w_A           18 GSHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDH--PNLTFVEGSIADHALVNQLIGDL-----QP   90 (333)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCCC--TTEEEEECCTTCHHHHHHHHHHH-----CC
T ss_pred             cCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhhc--CCceEEEEeCCCHHHHHHHHhcc-----CC
Confidence            567899999999999999999999999999999998754322111111  35889999999999998887652     69


Q ss_pred             cEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEeccccccc----CC-------
Q 021960          108 DILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVM----GG-------  176 (305)
Q Consensus       108 d~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~----~~-------  176 (305)
                      |+||||||....    .     +.++++  +++|+.++.++++++.+    .+.++||++||.+.+.    ..       
T Consensus        91 D~vih~A~~~~~----~-----~~~~~~--~~~N~~~~~~l~~a~~~----~~~~~iV~~SS~~~~g~~~~~~~~~~~E~  155 (333)
T 2q1w_A           91 DAVVHTAASYKD----P-----DDWYND--TLTNCVGGSNVVQAAKK----NNVGRFVYFQTALCYGVKPIQQPVRLDHP  155 (333)
T ss_dssp             SEEEECCCCCSC----T-----TCHHHH--HHHHTHHHHHHHHHHHH----TTCSEEEEEEEGGGGCSCCCSSSBCTTSC
T ss_pred             cEEEECceecCC----C-----ccCChH--HHHHHHHHHHHHHHHHH----hCCCEEEEECcHHHhCCCcccCCCCcCCC
Confidence            999999997532    1     223444  89999999999988865    4567999999977653    21       


Q ss_pred             -CCC-ccchhhHHHHHHHHHH-HHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHH
Q 021960          177 -LGP-HAYTASKHAIVGLTKN-AACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEF  253 (305)
Q Consensus       177 -~~~-~~Y~~sKaa~~~~~~~-la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (305)
                       ... ..|+.+|++.+.+++. ++        .+..+.|+.+..+.....+                  ....++.+..-
T Consensus       156 ~~p~~~~Y~~sK~~~E~~~~~s~~--------~~~ilR~~~v~gp~~~~~~------------------~~~~~~~~~~~  209 (333)
T 2q1w_A          156 RNPANSSYAISKSANEDYLEYSGL--------DFVTFRLANVVGPRNVSGP------------------LPIFFQRLSEG  209 (333)
T ss_dssp             CCCTTCHHHHHHHHHHHHHHHHTC--------CEEEEEESEEESTTCCSSH------------------HHHHHHHHHTT
T ss_pred             CCCCCCchHHHHHHHHHHHHhhhC--------CeEEEeeceEECcCCcCcH------------------HHHHHHHHHcC
Confidence             223 7899999999999887 54        4567778777655310000                  00011111000


Q ss_pred             Hhhc-CCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          254 VSGL-GNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       254 ~~~~-~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      ...+ ..+...++.++|+|++++++++...    |+++++++|...
T Consensus       210 ~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~----g~~~~v~~~~~~  251 (333)
T 2q1w_A          210 KKCFVTKARRDFVFVKDLARATVRAVDGVG----HGAYHFSSGTDV  251 (333)
T ss_dssp             CCCEEEECEECEEEHHHHHHHHHHHHTTCC----CEEEECSCSCCE
T ss_pred             CeeeCCCceEeeEEHHHHHHHHHHHHhcCC----CCEEEeCCCCCc
Confidence            0000 1234567899999999999998764    899999998654

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=99.89  E-value=3.5e-22  Score=180.82  Aligned_cols=161  Identities=14%  Similarity=0.059  Sum_probs=125.2

Q ss_pred             CCCCCCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHH
Q 021960           22 APPSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTV  101 (305)
Q Consensus        22 ~~~~~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~  101 (305)
                      ..+....+++|+||||||+|+||+++++.|+++|++|++++|+...          .++.++.+|++|.+++.++++   
T Consensus        10 ~~~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~----------~~~~~~~~Dl~d~~~~~~~~~---   76 (347)
T 4id9_A           10 HSSGLVPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG----------TGGEEVVGSLEDGQALSDAIM---   76 (347)
T ss_dssp             -----------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS----------SCCSEEESCTTCHHHHHHHHT---
T ss_pred             CCCcccccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC----------CCccEEecCcCCHHHHHHHHh---
Confidence            3444557788999999999999999999999999999999998653          347789999999999888775   


Q ss_pred             HhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccC------
Q 021960          102 SRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMG------  175 (305)
Q Consensus       102 ~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~------  175 (305)
                          .+|+|||+|+....          +.+.+++.+++|+.++.++++++..    .+.++||++||.+.+-.      
T Consensus        77 ----~~d~vih~A~~~~~----------~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~V~~SS~~vyg~~~~~~~  138 (347)
T 4id9_A           77 ----GVSAVLHLGAFMSW----------APADRDRMFAVNVEGTRRLLDAASA----AGVRRFVFASSGEVYPENRPEFL  138 (347)
T ss_dssp             ----TCSEEEECCCCCCS----------SGGGHHHHHHHHTHHHHHHHHHHHH----TTCSEEEEEEEGGGTTTTSCSSS
T ss_pred             ----CCCEEEECCcccCc----------chhhHHHHHHHHHHHHHHHHHHHHH----cCCCeEEEECCHHHhCCCCCCCC
Confidence                69999999996432          2234588999999999888887754    55679999999654422      


Q ss_pred             -------CCCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccc
Q 021960          176 -------GLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVA  216 (305)
Q Consensus       176 -------~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~  216 (305)
                             ......|+.+|.+.+.+++.++.+   .+++++.++|+.+.
T Consensus       139 ~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~  183 (347)
T 4id9_A          139 PVTEDHPLCPNSPYGLTKLLGEELVRFHQRS---GAMETVILRFSHTQ  183 (347)
T ss_dssp             SBCTTSCCCCCSHHHHHHHHHHHHHHHHHHH---SSSEEEEEEECEEE
T ss_pred             CcCCCCCCCCCChHHHHHHHHHHHHHHHHHh---cCCceEEEccceEe
Confidence                   234568999999999999999887   48999999999998

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=99.89  E-value=5.5e-22  Score=180.79  Aligned_cols=228  Identities=17%  Similarity=0.103  Sum_probs=156.6

Q ss_pred             CCCCCCCCEEEEecCCCchHHHHHHHHHH--cCCeEEEEecCcchhh-------h--HhhhcCCCCeEEEEecCCCHHHH
Q 021960           25 SHRRLEGKVAIITGGARGIGEAAVRLFAR--HGAKVVIADVEDTLGS-------V--LASTLAPAPVTFVHCDVSLEEDI   93 (305)
Q Consensus        25 ~~~~l~~k~vlVtGas~giG~~ia~~l~~--~g~~vv~~~r~~~~~~-------~--~~~~~~~~~v~~~~~D~~d~~~i   93 (305)
                      +.+++++++||||||+|+||+++++.|++  +|++|++++|+.....       .  ......+.++.++.+|++|.+++
T Consensus         4 ~~~~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~   83 (362)
T 3sxp_A            4 IDDELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDL   83 (362)
T ss_dssp             SSCCCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHH
T ss_pred             cchhcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHH
Confidence            34567899999999999999999999999  8999999998654110       0  00112344578999999999988


Q ss_pred             HHHHHHHHHhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccc
Q 021960           94 ENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGV  173 (305)
Q Consensus        94 ~~~~~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~  173 (305)
                      +++      ...++|+||||||...       .   +.++++..+++|+.++.++++.+..    . +++||++||.+.+
T Consensus        84 ~~~------~~~~~D~vih~A~~~~-------~---~~~~~~~~~~~Nv~gt~~ll~aa~~----~-~~~~V~~SS~~vy  142 (362)
T 3sxp_A           84 RRL------EKLHFDYLFHQAAVSD-------T---TMLNQELVMKTNYQAFLNLLEIARS----K-KAKVIYASSAGVY  142 (362)
T ss_dssp             HHH------TTSCCSEEEECCCCCG-------G---GCCCHHHHHHHHTHHHHHHHHHHHH----T-TCEEEEEEEGGGG
T ss_pred             HHh------hccCCCEEEECCccCC-------c---cccCHHHHHHHHHHHHHHHHHHHHH----c-CCcEEEeCcHHHh
Confidence            876      2347999999999542       1   2345678899999999999888743    3 3459999996544


Q ss_pred             cCC----------CCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCc
Q 021960          174 MGG----------LGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPS  243 (305)
Q Consensus       174 ~~~----------~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (305)
                      -..          .....|+.+|.+.+.+++.++.+     +.+..+.|+.+..|.........                
T Consensus       143 g~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~-----~~~~~lR~~~v~Gp~~~~~~~~~----------------  201 (362)
T 3sxp_A          143 GNTKAPNVVGKNESPENVYGFSKLCMDEFVLSHSND-----NVQVGLRYFNVYGPREFYKEKTA----------------  201 (362)
T ss_dssp             CSCCSSBCTTSCCCCSSHHHHHHHHHHHHHHHTTTT-----SCEEEEEECSEESTTCGGGGGGS----------------
T ss_pred             CCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHhcc-----CCEEEEEeCceeCcCCCCCCcch----------------
Confidence            221          12346999999999999887766     67778888877766422110000                


Q ss_pred             HHHHHHHHHHHhhc-------CCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          244 QKEVRKMEEFVSGL-------GNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       244 ~~~~~~~~~~~~~~-------~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      ......+.......       +.....++.++|+|++++++++...   +| ++++.+|...
T Consensus       202 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~ai~~~~~~~~---~g-~~~i~~~~~~  259 (362)
T 3sxp_A          202 SMVLQLALGAMAFKEVKLFEFGEQLRDFVYIEDVIQANVKAMKAQK---SG-VYNVGYSQAR  259 (362)
T ss_dssp             CHHHHHHHHHHTTSEEECSGGGCCEEECEEHHHHHHHHHHHTTCSS---CE-EEEESCSCEE
T ss_pred             hHHHHHHHHHHhCCCeEEECCCCeEEccEEHHHHHHHHHHHHhcCC---CC-EEEeCCCCCc
Confidence            00000111111110       1122346779999999999998763   68 9999888643

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=99.89  E-value=2.9e-23  Score=185.21  Aligned_cols=221  Identities=19%  Similarity=0.078  Sum_probs=158.5

Q ss_pred             CEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEEE
Q 021960           32 KVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILY  111 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~li  111 (305)
                      +++|||||+|+||+++++.|+++|++|++++|+........    ...+.++.+|++|.+ +.++++       . |+||
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~Dl~d~~-~~~~~~-------~-d~vi   67 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFV----NPSAELHVRDLKDYS-WGAGIK-------G-DVVF   67 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGS----CTTSEEECCCTTSTT-TTTTCC-------C-SEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhc----CCCceEEECccccHH-HHhhcC-------C-CEEE
Confidence            47999999999999999999999999999998765433221    345889999999976 554432       3 9999


Q ss_pred             EcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccC-----------CCCCc
Q 021960          112 NNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMG-----------GLGPH  180 (305)
Q Consensus       112 ~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~-----------~~~~~  180 (305)
                      |+||....        +.+.++++..+++|+.++.++++++..    .+.++||++||.+.+-.           .....
T Consensus        68 h~A~~~~~--------~~~~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~p~~  135 (312)
T 3ko8_A           68 HFAANPEV--------RLSTTEPIVHFNENVVATFNVLEWARQ----TGVRTVVFASSSTVYGDADVIPTPEEEPYKPIS  135 (312)
T ss_dssp             ECCSSCSS--------SGGGSCHHHHHHHHHHHHHHHHHHHHH----HTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCS
T ss_pred             ECCCCCCc--------hhhhhCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEeCcHHHhCCCCCCCCCCCCCCCCCC
Confidence            99995322        234456778899999999998888754    45679999999776532           23457


Q ss_pred             cchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHh---hc
Q 021960          181 AYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVS---GL  257 (305)
Q Consensus       181 ~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~  257 (305)
                      .|+.+|.+.+.+++.++.++   +++++.++||.+.++.....+.                  ...+..+.....   .+
T Consensus       136 ~Y~~sK~~~e~~~~~~~~~~---g~~~~~lrp~~v~g~~~~~~~~------------------~~~~~~~~~~~~~~~~~  194 (312)
T 3ko8_A          136 VYGAAKAAGEVMCATYARLF---GVRCLAVRYANVVGPRLRHGVI------------------YDFIMKLRRNPNVLEVL  194 (312)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECTTCCSSHH------------------HHHHHHHHHCTTEEEEC
T ss_pred             hHHHHHHHHHHHHHHHHHHh---CCCEEEEeeccccCcCCCCChH------------------HHHHHHHHhCCCCeEEc
Confidence            89999999999999999886   8999999999999885321000                  011111111000   00


Q ss_pred             --CCCCCCCCCHHHHHHHHHHhccC-CCCceeccEEEecCCccc
Q 021960          258 --GNLKGTTLRSKDIAEAALYLASD-ESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       258 --~~~~~~~~~~~dva~~v~~l~s~-~~~~~tG~~i~idgG~~~  298 (305)
                        +.....++.++|+|++++++++. ......|+++++.+|...
T Consensus       195 ~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~ni~~~~~~  238 (312)
T 3ko8_A          195 GDGTQRKSYLYVRDAVEATLAAWKKFEEMDAPFLALNVGNVDAV  238 (312)
T ss_dssp             ----CEECEEEHHHHHHHHHHHHHHHHHSCCSEEEEEESCSSCE
T ss_pred             CCCCeEEeeEEHHHHHHHHHHHHHhccccCCCCcEEEEcCCCce
Confidence              11223467799999999999876 112357899999988643

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=99.89  E-value=1.5e-22  Score=180.80  Aligned_cols=218  Identities=17%  Similarity=0.146  Sum_probs=155.2

Q ss_pred             CEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEEE
Q 021960           32 KVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILY  111 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~li  111 (305)
                      |++|||||+|+||+++++.|+++|..|++..++....+..     ...+.++.+|++| +++.++++       .+|+||
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~v~~~~~~~~~~~~~-----~~~~~~~~~Dl~~-~~~~~~~~-------~~d~vi   68 (313)
T 3ehe_A            2 SLIVVTGGAGFIGSHVVDKLSESNEIVVIDNLSSGNEEFV-----NEAARLVKADLAA-DDIKDYLK-------GAEEVW   68 (313)
T ss_dssp             -CEEEETTTSHHHHHHHHHHTTTSCEEEECCCSSCCGGGS-----CTTEEEECCCTTT-SCCHHHHT-------TCSEEE
T ss_pred             CEEEEECCCchHHHHHHHHHHhCCCEEEEEcCCCCChhhc-----CCCcEEEECcCCh-HHHHHHhc-------CCCEEE
Confidence            5799999999999999999999995555544443322211     3458899999999 88877764       699999


Q ss_pred             EcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEeccccccc-----------CCCCCc
Q 021960          112 NNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVM-----------GGLGPH  180 (305)
Q Consensus       112 ~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~-----------~~~~~~  180 (305)
                      |+|+....        +.+.+++++.+++|+.++.++++.+..    .+.++||++||.+.+-           +.....
T Consensus        69 h~a~~~~~--------~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~  136 (313)
T 3ehe_A           69 HIAANPDV--------RIGAENPDEIYRNNVLATYRLLEAMRK----AGVSRIVFTSTSTVYGEAKVIPTPEDYPTHPIS  136 (313)
T ss_dssp             ECCCCCCC--------C-CCCCHHHHHHHHHHHHHHHHHHHHH----HTCCEEEEECCGGGGCSCSSSSBCTTSCCCCCS
T ss_pred             ECCCCCCh--------hhhhhCHHHHHHHHHHHHHHHHHHHHH----cCCCeEEEeCchHHhCcCCCCCCCCCCCCCCCC
Confidence            99995321        234456788899999999988887543    4567999999977652           333457


Q ss_pred             cchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHh---hc
Q 021960          181 AYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVS---GL  257 (305)
Q Consensus       181 ~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~  257 (305)
                      .|+.+|.+.+.+++.++.++   +++++.++|+.+.++.....+                  ....+..+.....   .+
T Consensus       137 ~Y~~sK~~~e~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~------------------~~~~~~~~~~~~~~~~~~  195 (313)
T 3ehe_A          137 LYGASKLACEALIESYCHTF---DMQAWIYRFANVIGRRSTHGV------------------IYDFIMKLKRNPEELEIL  195 (313)
T ss_dssp             HHHHHHHHHHHHHHHHHHHT---TCEEEEEECSCEESTTCCCSH------------------HHHHHHHHHHCTTEEEES
T ss_pred             HHHHHHHHHHHHHHHHHHhc---CCCEEEEeeccccCcCCCcCh------------------HHHHHHHHHcCCCceEEe
Confidence            89999999999999999884   899999999999887421100                  0011111111000   00


Q ss_pred             --CCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          258 --GNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       258 --~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                        +.....++.++|+|+++++++++.   ..|+++++.+|...
T Consensus       196 ~~g~~~~~~i~v~Dva~a~~~~~~~~---~~~~~~ni~~~~~~  235 (313)
T 3ehe_A          196 GNGEQNKSYIYISDCVDAMLFGLRGD---ERVNIFNIGSEDQI  235 (313)
T ss_dssp             TTSCCEECCEEHHHHHHHHHHHTTCC---SSEEEEECCCSCCE
T ss_pred             CCCCeEEeEEEHHHHHHHHHHHhccC---CCCceEEECCCCCe
Confidence              122345778999999999999843   46899999988543

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=99.89  E-value=6.8e-22  Score=178.23  Aligned_cols=221  Identities=18%  Similarity=0.130  Sum_probs=159.6

Q ss_pred             EEEEecCCCchHHHHHHHHHHc---C---CeEEEEecCcch--hhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           33 VAIITGGARGIGEAAVRLFARH---G---AKVVIADVEDTL--GSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        33 ~vlVtGas~giG~~ia~~l~~~---g---~~vv~~~r~~~~--~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      ++|||||+|+||+++++.|+++   |   ++|++++|+...  ...+.......++.++.+|++|.+++++++       
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~-------   74 (337)
T 1r6d_A            2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLAREL-------   74 (337)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHT-------
T ss_pred             eEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhcccCCCeEEEEcCCCCHHHHHHHh-------
Confidence            6899999999999999999997   8   999999886421  122222112356899999999998888766       


Q ss_pred             CCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEeccccccc----------
Q 021960          105 GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVM----------  174 (305)
Q Consensus       105 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~----------  174 (305)
                      ..+|+|||+||....        +.+.+++++.+++|+.++.++++++.+    .+.++||++||.+.+-          
T Consensus        75 ~~~d~Vih~A~~~~~--------~~~~~~~~~~~~~Nv~~~~~l~~a~~~----~~~~~~v~~SS~~vyg~~~~~~~~E~  142 (337)
T 1r6d_A           75 RGVDAIVHFAAESHV--------DRSIAGASVFTETNVQGTQTLLQCAVD----AGVGRVVHVSTNQVYGSIDSGSWTES  142 (337)
T ss_dssp             TTCCEEEECCSCCCH--------HHHHHCCHHHHHHHTHHHHHHHHHHHH----TTCCEEEEEEEGGGGCCCSSSCBCTT
T ss_pred             cCCCEEEECCCccCc--------hhhhhCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEecchHHhCCCCCCCCCCC
Confidence            479999999996421        123355678899999999999988876    3457999999976542          


Q ss_pred             -CCCCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHH
Q 021960          175 -GGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEF  253 (305)
Q Consensus       175 -~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (305)
                       +......|+.+|.+.+.+++.++.++   +++++.++||.+.++.....  .      .         ....+   ...
T Consensus       143 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~---g~~~~ilrp~~v~G~~~~~~--~------~---------~~~~~---~~~  199 (337)
T 1r6d_A          143 SPLEPNSPYAASKAGSDLVARAYHRTY---GLDVRITRCCNNYGPYQHPE--K------L---------IPLFV---TNL  199 (337)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTTCCTT--S------H---------HHHHH---HHH
T ss_pred             CCCCCCCchHHHHHHHHHHHHHHHHHH---CCCEEEEEeeeeECCCCCCC--C------h---------HHHHH---HHH
Confidence             22345789999999999999998875   79999999999988763110  0      0         00111   111


Q ss_pred             Hhhc-------CCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          254 VSGL-------GNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       254 ~~~~-------~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      ....       +.....++.++|+|+++++++++.   .+|+++++++|...
T Consensus       200 ~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~---~~g~~~~v~~~~~~  248 (337)
T 1r6d_A          200 LDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGG---RAGEIYHIGGGLEL  248 (337)
T ss_dssp             HTTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHC---CTTCEEEECCCCEE
T ss_pred             hcCCCcEEeCCCCeeEeeEeHHHHHHHHHHHHhCC---CCCCEEEeCCCCCc
Confidence            1110       112234678999999999998764   37999999998643

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.88  E-value=3.6e-22  Score=170.10  Aligned_cols=209  Identities=11%  Similarity=-0.005  Sum_probs=153.8

Q ss_pred             CEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEEE
Q 021960           32 KVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILY  111 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~li  111 (305)
                      +++|||||+|+||+++++.|+++|++|++++|+.......     ..++.++.+|++|.++++++++       .+|+||
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-----~~~~~~~~~Dl~d~~~~~~~~~-------~~d~vi   72 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIE-----NEHLKVKKADVSSLDEVCEVCK-------GADAVI   72 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCC-----CTTEEEECCCTTCHHHHHHHHT-------TCSEEE
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhc-----cCceEEEEecCCCHHHHHHHhc-------CCCEEE
Confidence            6899999999999999999999999999999986554322     2458999999999999988775       589999


Q ss_pred             EcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCC----------CCcc
Q 021960          112 NNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGL----------GPHA  181 (305)
Q Consensus       112 ~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~----------~~~~  181 (305)
                      |+||....          +    .+.+++|+.++.++++.+..    .+..+||++||.+...+.+          ....
T Consensus        73 ~~a~~~~~----------~----~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~p~~~  134 (227)
T 3dhn_A           73 SAFNPGWN----------N----PDIYDETIKVYLTIIDGVKK----AGVNRFLMVGGAGSLFIAPGLRLMDSGEVPENI  134 (227)
T ss_dssp             ECCCC--------------------CCSHHHHHHHHHHHHHHH----TTCSEEEEECCSTTSEEETTEEGGGTTCSCGGG
T ss_pred             EeCcCCCC----------C----hhHHHHHHHHHHHHHHHHHH----hCCCEEEEeCChhhccCCCCCccccCCcchHHH
Confidence            99986421          0    12567888888777776644    5567999999987665432          3578


Q ss_pred             chhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCC
Q 021960          182 YTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLK  261 (305)
Q Consensus       182 Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (305)
                      |+.+|.+.+.+.+.++.+   .+++++.++||.+.++........        .......+               ....
T Consensus       135 Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~v~g~~~~~~~~~--------~~~~~~~~---------------~~~~  188 (227)
T 3dhn_A          135 LPGVKALGEFYLNFLMKE---KEIDWVFFSPAADMRPGVRTGRYR--------LGKDDMIV---------------DIVG  188 (227)
T ss_dssp             HHHHHHHHHHHHHTGGGC---CSSEEEEEECCSEEESCCCCCCCE--------EESSBCCC---------------CTTS
T ss_pred             HHHHHHHHHHHHHHHhhc---cCccEEEEeCCcccCCCcccccee--------ecCCCccc---------------CCCC
Confidence            999999999998887764   589999999999988752210000        00000000               0111


Q ss_pred             CCCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          262 GTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       262 ~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      ..++.++|+|+++++++.+..  ..|+++.+.+.-.+
T Consensus       189 ~~~i~~~Dva~ai~~~l~~~~--~~g~~~~~~~~~~~  223 (227)
T 3dhn_A          189 NSHISVEDYAAAMIDELEHPK--HHQERFTIGYLEHH  223 (227)
T ss_dssp             CCEEEHHHHHHHHHHHHHSCC--CCSEEEEEECCSCC
T ss_pred             CcEEeHHHHHHHHHHHHhCcc--ccCcEEEEEeehhc
Confidence            346789999999999998764  57999998876544

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=99.88  E-value=1.1e-21  Score=177.82  Aligned_cols=236  Identities=14%  Similarity=-0.004  Sum_probs=165.9

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCC-------CCeEEEEecCCCHHHHHHHHHH
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAP-------APVTFVHCDVSLEEDIENLINS   99 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~-------~~v~~~~~D~~d~~~i~~~~~~   99 (305)
                      +.+++++||||||+|+||+++++.|+++|++|++++|+..........+..       .++.++.+|++|.+++.++++ 
T Consensus        21 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   99 (351)
T 3ruf_A           21 LIFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMK-   99 (351)
T ss_dssp             HHHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTT-
T ss_pred             CCCCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhc-
Confidence            345789999999999999999999999999999999865432222111110       468999999999998888775 


Q ss_pred             HHHhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCC--
Q 021960          100 TVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGL--  177 (305)
Q Consensus       100 ~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~--  177 (305)
                            .+|+|||+||....        ..+.++....+++|+.++.++++++..    .+..+||++||.+.+...+  
T Consensus       100 ------~~d~Vih~A~~~~~--------~~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~v~~SS~~vyg~~~~~  161 (351)
T 3ruf_A          100 ------GVDHVLHQAALGSV--------PRSIVDPITTNATNITGFLNILHAAKN----AQVQSFTYAASSSTYGDHPAL  161 (351)
T ss_dssp             ------TCSEEEECCCCCCH--------HHHHHCHHHHHHHHTHHHHHHHHHHHH----TTCSEEEEEEEGGGGTTCCCS
T ss_pred             ------CCCEEEECCccCCc--------chhhhCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEecHHhcCCCCCC
Confidence                  69999999996421        124456778899999999888887754    4567999999987653322  


Q ss_pred             ---------CCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHH
Q 021960          178 ---------GPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVR  248 (305)
Q Consensus       178 ---------~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (305)
                               ....|+.+|.+.+.+++.++.+.   +++++.++|+.+..+........             ..-....+.
T Consensus       162 ~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~-------------~~~~~~~~~  225 (351)
T 3ruf_A          162 PKVEENIGNPLSPYAVTKYVNEIYAQVYARTY---GFKTIGLRYFNVFGRRQDPNGAY-------------AAVIPKWTA  225 (351)
T ss_dssp             SBCTTCCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECSEESTTCCCCSTT-------------CCHHHHHHH
T ss_pred             CCccCCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeeCceeCcCCCCCcch-------------hhHHHHHHH
Confidence                     24689999999999999998885   79999999999988742210000             000001111


Q ss_pred             HHHHHH--hhc--CCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          249 KMEEFV--SGL--GNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       249 ~~~~~~--~~~--~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      .+..-.  ...  +.....++.++|+|++++.++... ....|+++++.+|...
T Consensus       226 ~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~-~~~~~~~~ni~~~~~~  278 (351)
T 3ruf_A          226 AMLKGDDVYINGDGETSRDFCYIDNVIQMNILSALAK-DSAKDNIYNVAVGDRT  278 (351)
T ss_dssp             HHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTCC-GGGCSEEEEESCSCCE
T ss_pred             HHHcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHHhhc-cccCCCEEEeCCCCcc
Confidence            111100  000  112234678999999999988762 2357999999888643

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.88  E-value=6.8e-22  Score=178.34  Aligned_cols=227  Identities=18%  Similarity=0.119  Sum_probs=150.4

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhh--hcCC--CCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           29 LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLAS--TLAP--APVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        29 l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~--~~~~--~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      +++|++|||||+|+||++++++|+++|++|+++.|+.........  .+..  .++.++.+|++|.++++++++      
T Consensus         3 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------   76 (337)
T 2c29_D            3 SQSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIK------   76 (337)
T ss_dssp             ---CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHHT------
T ss_pred             CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHHc------
Confidence            467899999999999999999999999999988887543221111  1111  247889999999988887764      


Q ss_pred             CCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCC-------
Q 021960          105 GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGL-------  177 (305)
Q Consensus       105 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~-------  177 (305)
                       .+|+|||+|+...       ....+  ..++.+++|+.++.++++++.+..   ..++||++||.++..+.+       
T Consensus        77 -~~d~Vih~A~~~~-------~~~~~--~~~~~~~~nv~gt~~ll~a~~~~~---~~~riV~~SS~~~~~~~~~~~~~~~  143 (337)
T 2c29_D           77 -GCTGVFHVATPMD-------FESKD--PENEVIKPTIEGMLGIMKSCAAAK---TVRRLVFTSSAGTVNIQEHQLPVYD  143 (337)
T ss_dssp             -TCSEEEECCCCCC-------SSCSS--HHHHTHHHHHHHHHHHHHHHHHHS---CCCEEEEECCGGGTSCSSSCCSEEC
T ss_pred             -CCCEEEEeccccC-------CCCCC--hHHHHHHHHHHHHHHHHHHHHhCC---CccEEEEeeeHhhcccCCCCCcccC
Confidence             5899999998531       11112  235688999999999999887632   257999999987543211       


Q ss_pred             ---------------CCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhh--hccC
Q 021960          178 ---------------GPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDEC--MNFG  240 (305)
Q Consensus       178 ---------------~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~--~~~~  240 (305)
                                     ....|+.+|.+.+.+++.++.+   .|+++++++||.+.++.....+..     .....  ...+
T Consensus       144 E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gi~~~~lrp~~v~Gp~~~~~~~~-----~~~~~~~~~~g  215 (337)
T 2c29_D          144 ESCWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAKE---NNIDFITIIPTLVVGPFIMSSMPP-----SLITALSPITG  215 (337)
T ss_dssp             TTCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHH---HTCCEEEEEECEEESCCSCSSCCH-----HHHHHTHHHHT
T ss_pred             cccCCchhhhcccCCccchHHHHHHHHHHHHHHHHHH---cCCcEEEEeCCceECCCCCCCCCc-----hHHHHHHHHcC
Confidence                           2236999999999998887755   489999999999999863211000     00000  0000


Q ss_pred             CCcHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCC
Q 021960          241 IPSQKEVRKMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGG  295 (305)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG  295 (305)
                      .+         .....  ....+++.++|+|++++++++..  ...|..+..+++
T Consensus       216 ~~---------~~~~~--~~~~~~i~v~Dva~a~~~~~~~~--~~~~~~~~~~~~  257 (337)
T 2c29_D          216 NE---------AHYSI--IRQGQFVHLDDLCNAHIYLFENP--KAEGRYICSSHD  257 (337)
T ss_dssp             CG---------GGHHH--HTEEEEEEHHHHHHHHHHHHHCT--TCCEEEEECCEE
T ss_pred             CC---------ccccc--cCCCCEEEHHHHHHHHHHHhcCc--ccCceEEEeCCC
Confidence            00         00000  01234789999999999998753  235655444443

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.88  E-value=5e-22  Score=185.19  Aligned_cols=227  Identities=13%  Similarity=0.041  Sum_probs=157.3

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchh---hhHhhh-----------cCCCCeEEEEecCCCHHHH
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLG---SVLAST-----------LAPAPVTFVHCDVSLEEDI   93 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~---~~~~~~-----------~~~~~v~~~~~D~~d~~~i   93 (305)
                      ...+++||||||+|+||++++++|+++|++|+++.|+....   +.+.+.           ....++.++.+|++|.+++
T Consensus        66 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l  145 (427)
T 4f6c_A           66 HRPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDV  145 (427)
T ss_dssp             CCCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCC
T ss_pred             CCCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccC
Confidence            45678999999999999999999999999999999987622   111111           1135699999999998777


Q ss_pred             HHHHHHHHHhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEeccccc-
Q 021960           94 ENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAG-  172 (305)
Q Consensus        94 ~~~~~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~-  172 (305)
                      .        ..+++|+||||||...           ..+.+++.+++|+.++.++++++.+     +..+||++||... 
T Consensus       146 ~--------~~~~~d~Vih~A~~~~-----------~~~~~~~~~~~Nv~g~~~l~~aa~~-----~~~~~v~~SS~~~G  201 (427)
T 4f6c_A          146 V--------LPENMDTIIHAGARTD-----------HFGDDDEFEKVNVQGTVDVIRLAQQ-----HHARLIYVSTISVG  201 (427)
T ss_dssp             C--------CSSCCSEEEECCCCC------------------CHHHHHHHHHHHHHHHHHH-----TTCEEEEEEEGGGG
T ss_pred             C--------CcCCCCEEEECCcccC-----------CCCCHHHHHHHHHHHHHHHHHHHHh-----cCCcEEEECchHhC
Confidence            7        4468999999999752           2246788899999999999998865     4578999999887 


Q ss_pred             -c----------------cCCCCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhh
Q 021960          173 -V----------------MGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDE  235 (305)
Q Consensus       173 -~----------------~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~  235 (305)
                       .                .+......|+.+|.+.+.+++.++.    .|++++.|+||.+.++.....+....       
T Consensus       202 ~~~~~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~g~~~~ivRpg~v~G~~~~~~~~~~~-------  270 (427)
T 4f6c_A          202 TYFDIDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN----NGLDGRIVRVGNLTSPYNGRWHMRNI-------  270 (427)
T ss_dssp             SEECSSCSCCEECTTCSCSSCCCCSHHHHHHHHHHHHHHHHHH----TTCCEEEEEECCEESCSSSCCCCTTG-------
T ss_pred             CCccCCCCCccccccccccCCCCCCchHHHHHHHHHHHHHHHH----cCCCEEEEeCCeeecCCCCCccccCc-------
Confidence             0                0122567899999999999998753    58999999999998876432211100       


Q ss_pred             hhccCCCcHHHHHHHHHHHhhc------CCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          236 CMNFGIPSQKEVRKMEEFVSGL------GNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                            ........+.......      ......++.++|+|+++++++....   .|+++++++|...
T Consensus       271 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~DvA~ai~~~~~~~~---~g~~~~l~~~~~~  330 (427)
T 4f6c_A          271 ------KTNRFSMVMNDLLQLDCIGVSMAEMPVDFSFVDTTARQIVALAQVNT---PQIIYHVLSPNKM  330 (427)
T ss_dssp             ------GGCHHHHHHHHHHHSSEEEHHHHTCEECCEEHHHHHHHHHHHTTSCC---CCSEEEESCSCCE
T ss_pred             ------chHHHHHHHHHHHhcCCCCCccccceEEEeeHHHHHHHHHHHHcCCC---CCCEEEecCCCCC
Confidence                  0000111111111110      1223457789999999999998764   8999999988643

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.88  E-value=6.9e-22  Score=176.89  Aligned_cols=218  Identities=18%  Similarity=0.163  Sum_probs=145.1

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHcCCeEEEEec-Ccch---hhhHhhhcC--CCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           31 GKVAIITGGARGIGEAAVRLFARHGAKVVIADV-EDTL---GSVLASTLA--PAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        31 ~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r-~~~~---~~~~~~~~~--~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      ||++|||||+|+||+++++.|+++|++|+++.| +...   ...+. .+.  ..++.++.+|++|.++++++++      
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~------   73 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLT-NLPGASEKLHFFNADLSNPDSFAAAIE------   73 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHHH-TSTTHHHHEEECCCCTTCGGGGHHHHT------
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHHH-hhhccCCceEEEecCCCCHHHHHHHHc------
Confidence            578999999999999999999999999998887 4321   11111 111  1247788999999988887765      


Q ss_pred             CCccEEEEcCCCCCCCCCCCcccCCCHHH-HHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCC-----
Q 021960          105 GRLDILYNNAGVLGNQRKHKSIIDFDADE-FDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLG-----  178 (305)
Q Consensus       105 g~id~li~nag~~~~~~~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~-----  178 (305)
                       .+|+|||+|+.. .         .+.++ +++.+++|+.++.++++++.+.   .+.++||++||.++..+.+.     
T Consensus        74 -~~d~vih~A~~~-~---------~~~~~~~~~~~~~nv~gt~~l~~aa~~~---~~~~~iV~~SS~~~~~~~~~~~~~~  139 (322)
T 2p4h_X           74 -GCVGIFHTASPI-D---------FAVSEPEEIVTKRTVDGALGILKACVNS---KTVKRFIYTSSGSAVSFNGKDKDVL  139 (322)
T ss_dssp             -TCSEEEECCCCC------------------CHHHHHHHHHHHHHHHHHTTC---SSCCEEEEEEEGGGTSCSSSCCSEE
T ss_pred             -CCCEEEEcCCcc-c---------CCCCChHHHHHHHHHHHHHHHHHHHHhc---CCccEEEEeccHHHcccCCCCCeec
Confidence             589999999642 1         11122 3458899999999999887542   14579999999875433211     


Q ss_pred             -----------------CccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCC
Q 021960          179 -----------------PHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGI  241 (305)
Q Consensus       179 -----------------~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~  241 (305)
                                       ...|+.+|.+.+.+++.++.+   .|+++++++||.+.+++.....                 
T Consensus       140 ~e~~~~~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrp~~v~g~~~~~~~-----------------  199 (322)
T 2p4h_X          140 DESDWSDVDLLRSVKPFGWNYAVSKTLAEKAVLEFGEQ---NGIDVVTLILPFIVGRFVCPKL-----------------  199 (322)
T ss_dssp             CTTCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHH---TTCCEEEEEECEEESCCCSSSC-----------------
T ss_pred             CCccccchhhhcccCcccccHHHHHHHHHHHHHHHHHh---cCCcEEEEcCCceECCCCCCCC-----------------
Confidence                             116999999888887766544   5899999999999998632110                 


Q ss_pred             CcHHHHHHHHHHHhhc--CCCCC--CCCCHHHHHHHHHHhccCCCCceeccEEEecC
Q 021960          242 PSQKEVRKMEEFVSGL--GNLKG--TTLRSKDIAEAALYLASDESRYVSGHNLVVDG  294 (305)
Q Consensus       242 ~~~~~~~~~~~~~~~~--~~~~~--~~~~~~dva~~v~~l~s~~~~~~tG~~i~idg  294 (305)
                      +  .............  ..+.+  .++.++|+|++++++++...  .+|+ +++.+
T Consensus       200 ~--~~~~~~~~~~~g~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~--~~g~-~~~~~  251 (322)
T 2p4h_X          200 P--DSIEKALVLVLGKKEQIGVTRFHMVHVDDVARAHIYLLENSV--PGGR-YNCSP  251 (322)
T ss_dssp             C--HHHHHHTHHHHSCGGGCCEEEEEEEEHHHHHHHHHHHHHSCC--CCEE-EECCC
T ss_pred             C--chHHHHHHHHhCCCccCcCCCcCEEEHHHHHHHHHHHhhCcC--CCCC-EEEcC
Confidence            0  0011110111100  00101  37899999999999997642  5686 44544

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=99.88  E-value=4.8e-21  Score=176.78  Aligned_cols=175  Identities=14%  Similarity=0.027  Sum_probs=133.4

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhh-----------------hHhh--hcCCCCeEEEEecCC
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGS-----------------VLAS--TLAPAPVTFVHCDVS   88 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~-----------------~~~~--~~~~~~v~~~~~D~~   88 (305)
                      -..+..||||||+|+||+++++.|+++|++|++++|......                 .+..  .....++.++.+|++
T Consensus         8 ~~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl~   87 (404)
T 1i24_A            8 HHHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDIC   87 (404)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTT
T ss_pred             ccCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCCC
Confidence            346789999999999999999999999999999987532211                 1111  011345889999999


Q ss_pred             CHHHHHHHHHHHHHhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCC-CEEEEe
Q 021960           89 LEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGG-GCIIST  167 (305)
Q Consensus        89 d~~~i~~~~~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~iv~i  167 (305)
                      |.++++++++..     ++|+||||||....     .....+.+++...+++|+.++.++++++.+.    +. .+||++
T Consensus        88 d~~~~~~~~~~~-----~~D~Vih~A~~~~~-----~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~----~~~~~~V~~  153 (404)
T 1i24_A           88 DFEFLAESFKSF-----EPDSVVHFGEQRSA-----PYSMIDRSRAVYTQHNNVIGTLNVLFAIKEF----GEECHLVKL  153 (404)
T ss_dssp             SHHHHHHHHHHH-----CCSEEEECCSCCCH-----HHHTSCHHHHHHHHHHHHHHHHHHHHHHHHH----CTTCEEEEE
T ss_pred             CHHHHHHHHhcc-----CCCEEEECCCCCCc-----cchhhCccchhhhHHHHHHHHHHHHHHHHHh----CCCcEEEEe
Confidence            999999888765     69999999996432     1112356677889999999999998888653    33 499999


Q ss_pred             ccccccc------------------------CCCCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCcccccc
Q 021960          168 ASVAGVM------------------------GGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSM  219 (305)
Q Consensus       168 sS~~~~~------------------------~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~  219 (305)
                      ||.+.+-                        +......|+.+|++.+.+++.++.++   |+++++|+||.+.++.
T Consensus       154 SS~~vyg~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ivrp~~v~Gp~  226 (404)
T 1i24_A          154 GTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVK  226 (404)
T ss_dssp             CCGGGGCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECSC
T ss_pred             CcHHHhCCCCCCCCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhc---CCeEEEEecceeeCCC
Confidence            9976442                        22335689999999999999998875   8999999999998875

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.87  E-value=3.4e-21  Score=174.32  Aligned_cols=237  Identities=16%  Similarity=0.140  Sum_probs=159.6

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcch-------hhhHhhh--cCCCCeEEEEecCCCHHHHHHHHHHHH
Q 021960           31 GKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTL-------GSVLAST--LAPAPVTFVHCDVSLEEDIENLINSTV  101 (305)
Q Consensus        31 ~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~-------~~~~~~~--~~~~~v~~~~~D~~d~~~i~~~~~~~~  101 (305)
                      +|++|||||+|+||+++++.|+++|++|++++|....       .+.....  ..+.++.++.+|++|.++++++++.. 
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~-   80 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKY-   80 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHC-
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHhc-
Confidence            5789999999999999999999999999999875432       1111111  11345889999999999988887652 


Q ss_pred             HhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccC------
Q 021960          102 SRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMG------  175 (305)
Q Consensus       102 ~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~------  175 (305)
                          ++|+|||+||.....        .+.+++++.+++|+.++.++++++.    +.+.++||++||.+.+-.      
T Consensus        81 ----~~d~vih~A~~~~~~--------~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~iv~~SS~~~~g~~~~~~~  144 (348)
T 1ek6_A           81 ----SFMAVIHFAGLKAVG--------ESVQKPLDYYRVNLTGTIQLLEIMK----AHGVKNLVFSSSATVYGNPQYLPL  144 (348)
T ss_dssp             ----CEEEEEECCSCCCHH--------HHHHCHHHHHHHHHHHHHHHHHHHH----HTTCCEEEEEEEGGGGCSCSSSSB
T ss_pred             ----CCCEEEECCCCcCcc--------chhhchHHHHHHHHHHHHHHHHHHH----HhCCCEEEEECcHHHhCCCCCCCc
Confidence                699999999964211        1345678899999999998887654    345679999999766521      


Q ss_pred             ------CCCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHH
Q 021960          176 ------GLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRK  249 (305)
Q Consensus       176 ------~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (305)
                            .+....|+.+|++.+.+++.++.+  ..++++..++|+.+..+.....+.....          +.+. ..+..
T Consensus       145 ~E~~~~~p~~~~Y~~sK~~~e~~~~~~~~~--~~~~~~~~lR~~~v~G~~~~g~~g~~~~----------~~~~-~~~~~  211 (348)
T 1ek6_A          145 DEAHPTGGCTNPYGKSKFFIEEMIRDLCQA--DKTWNAVLLRYFNPTGAHASGCIGEDPQ----------GIPN-NLMPY  211 (348)
T ss_dssp             CTTSCCCCCSSHHHHHHHHHHHHHHHHHHH--CTTCEEEEEEECEEECCCTTSSCCCCCS----------SSCC-SHHHH
T ss_pred             CCCCCCCCCCCchHHHHHHHHHHHHHHHhc--CCCcceEEEeeccccCCCcccccCcCcc----------cchh-hHHHH
Confidence                  122678999999999999999887  3469999999998877631111000000          0000 01111


Q ss_pred             HHHHHh-h------c--------CCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCcc
Q 021960          250 MEEFVS-G------L--------GNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT  297 (305)
Q Consensus       250 ~~~~~~-~------~--------~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~  297 (305)
                      +..... .      +        +.....++.++|+|++++.++........++++++.+|..
T Consensus       212 ~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~ni~~~~~  274 (348)
T 1ek6_A          212 VSQVAIGRREALNVFGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTG  274 (348)
T ss_dssp             HHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCC
T ss_pred             HHHHHHhcCCCeEEeCCcccCCCCceEEeeEEHHHHHHHHHHHHhcccccCCceEEEeCCCCC
Confidence            111111 0      0        1122346789999999999886532122248999987754

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=99.87  E-value=2.5e-21  Score=177.52  Aligned_cols=233  Identities=14%  Similarity=0.092  Sum_probs=159.9

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcC-CeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCC
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHG-AKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGR  106 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g-~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~  106 (305)
                      .++++++|||||+|+||+++++.|+++| ++|++++|+........  ....++.++.+|++|.++++++++       .
T Consensus        29 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l--~~~~~v~~~~~Dl~d~~~l~~~~~-------~   99 (377)
T 2q1s_A           29 KLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINV--PDHPAVRFSETSITDDALLASLQD-------E   99 (377)
T ss_dssp             GGTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGS--CCCTTEEEECSCTTCHHHHHHCCS-------C
T ss_pred             HhCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhc--cCCCceEEEECCCCCHHHHHHHhh-------C
Confidence            4678999999999999999999999999 99999998754322111  013468899999999988776654       6


Q ss_pred             ccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC-CCCEEEEeccccccc-----------
Q 021960          107 LDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINR-GGGCIISTASVAGVM-----------  174 (305)
Q Consensus       107 id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~isS~~~~~-----------  174 (305)
                      +|+|||+||....        ..+.+++++.+++|+.++.++++++.    +. +.++||++||.+.+-           
T Consensus       100 ~d~Vih~A~~~~~--------~~~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~~V~~SS~~vyg~~~~~~~~~~E  167 (377)
T 2q1s_A          100 YDYVFHLATYHGN--------QSSIHDPLADHENNTLTTLKLYERLK----HFKRLKKVVYSAAGCSIAEKTFDDAKATE  167 (377)
T ss_dssp             CSEEEECCCCSCH--------HHHHHCHHHHHHHHTHHHHHHHHHHT----TCSSCCEEEEEEEC--------------C
T ss_pred             CCEEEECCCccCc--------hhhhhCHHHHHHHHHHHHHHHHHHHH----HhCCCCeEEEeCCHHHcCCCCCCCcCccc
Confidence            9999999996421        12345678899999999988887763    34 457999999976431           


Q ss_pred             -----CC-CCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchh---cccCCCCCchhhhhhccCCCcHH
Q 021960          175 -----GG-LGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVN---AWRNSGDGEEEDECMNFGIPSQK  245 (305)
Q Consensus       175 -----~~-~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~---~~~~~~~~~~~~~~~~~~~~~~~  245 (305)
                           +. .....|+.+|++.+.+++.++.++   +++++.++||.+.++....   .|....   ..    .+......
T Consensus       168 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilRp~~v~G~~~~~~~g~~~~~~---~~----~~~~~~~~  237 (377)
T 2q1s_A          168 ETDIVSLHNNDSPYSMSKIFGEFYSVYYHKQH---QLPTVRARFQNVYGPGEILGAGRWRGTP---AT----VWRNVTPT  237 (377)
T ss_dssp             CCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTCCTTCSSCCSSG---GG----TSCSHHHH
T ss_pred             ccccccccCCCCchHHHHHHHHHHHHHHHHHh---CCCEEEEeeccEECCCCcccccccccCc---cc----ccccHHHH
Confidence                 22 345689999999999999998875   7999999999998875300   000000   00    00000001


Q ss_pred             HHHHHHHHHhhc-------CCCCCCCCCHHHHHHH-HHHhccCCCCceeccEEEecCCccc
Q 021960          246 EVRKMEEFVSGL-------GNLKGTTLRSKDIAEA-ALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       246 ~~~~~~~~~~~~-------~~~~~~~~~~~dva~~-v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      .+.   ......       +.....++.++|+|++ ++++++...   +| ++++.+|...
T Consensus       238 ~~~---~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~i~~~~~~~~---~g-~~~i~~~~~~  291 (377)
T 2q1s_A          238 FIY---KALKGMPLPLENGGVATRDFIFVEDVANGLIACAADGTP---GG-VYNIASGKET  291 (377)
T ss_dssp             HHH---HHHTTCCCCCSGGGCCEECCEEHHHHHHHHHHHHHHCCT---TE-EEECCCCCCE
T ss_pred             HHH---HHHcCCCeEEeCCCCeEEeeEEHHHHHHHHHHHHHhcCC---CC-eEEecCCCce
Confidence            111   111110       0122345679999999 999988753   78 9999988543

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=99.87  E-value=8e-22  Score=180.22  Aligned_cols=243  Identities=14%  Similarity=0.129  Sum_probs=163.0

Q ss_pred             eeeeccCCCCCCCCCCCCEEEEecCCCchHHHHHHHHHHc-CCeEEEEecCcchhhhHhhhcCCCCeEEEEecCC-CHHH
Q 021960           15 HVLAWDDAPPSHRRLEGKVAIITGGARGIGEAAVRLFARH-GAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVS-LEED   92 (305)
Q Consensus        15 ~~~~~~~~~~~~~~l~~k~vlVtGas~giG~~ia~~l~~~-g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~-d~~~   92 (305)
                      |.-..+..++....|++++||||||+|+||+++++.|+++ |++|++++|+......+.   ...++.++.+|++ |.++
T Consensus         8 ~~~~~~~~~~~~~~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~---~~~~v~~~~~Dl~~d~~~   84 (372)
T 3slg_A            8 HMGTLEAQTQGPGSMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLV---KHERMHFFEGDITINKEW   84 (372)
T ss_dssp             ---------------CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGG---GSTTEEEEECCTTTCHHH
T ss_pred             cccchhhhhcCCcccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhc---cCCCeEEEeCccCCCHHH
Confidence            3344555555566788899999999999999999999998 999999999875544332   2346999999999 9999


Q ss_pred             HHHHHHHHHHhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEeccccc
Q 021960           93 IENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAG  172 (305)
Q Consensus        93 i~~~~~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~  172 (305)
                      ++++++       .+|+|||+||.....        ...++..+.+++|+.++.++++++..    .+ .+||++||.+.
T Consensus        85 ~~~~~~-------~~d~Vih~A~~~~~~--------~~~~~~~~~~~~nv~~~~~ll~a~~~----~~-~~~v~~SS~~v  144 (372)
T 3slg_A           85 VEYHVK-------KCDVILPLVAIATPA--------TYVKQPLRVFELDFEANLPIVRSAVK----YG-KHLVFPSTSEV  144 (372)
T ss_dssp             HHHHHH-------HCSEEEECBCCCCHH--------HHHHCHHHHHHHHTTTTHHHHHHHHH----HT-CEEEEECCGGG
T ss_pred             HHHHhc-------cCCEEEEcCccccHH--------HHhhCHHHHHHHHHHHHHHHHHHHHH----hC-CcEEEeCcHHH
Confidence            888776       489999999975321        12345677889999999888887754    34 79999999654


Q ss_pred             ccCC------------------CCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhh
Q 021960          173 VMGG------------------LGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEED  234 (305)
Q Consensus       173 ~~~~------------------~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~  234 (305)
                      +-..                  .....|+.+|.+.+.+++.++.+    +++++.++|+.+..+.....+.....     
T Consensus       145 yg~~~~~~~~e~~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~----g~~~~ilRp~~v~G~~~~~~~~~~~~-----  215 (372)
T 3slg_A          145 YGMCADEQFDPDASALTYGPINKPRWIYACSKQLMDRVIWGYGME----GLNFTLFRPFNWIGPGLDSIYTPKEG-----  215 (372)
T ss_dssp             GBSCCCSSBCTTTCCEEECCTTCTTHHHHHHHHHHHHHHHHHHTT----TCEEEEEEECSEECSSCCCTTCSBSC-----
T ss_pred             hCCCCCCCCCccccccccCCCCCCCCcHHHHHHHHHHHHHHHHHC----CCCEEEEccccccCCCcccccccccc-----
Confidence            3221                  12337999999999999988765    79999999999988753221110000     


Q ss_pred             hhhccCCCcHHHHH-HHHHHHhhc-------CCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecC-Ccc
Q 021960          235 ECMNFGIPSQKEVR-KMEEFVSGL-------GNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDG-GVT  297 (305)
Q Consensus       235 ~~~~~~~~~~~~~~-~~~~~~~~~-------~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idg-G~~  297 (305)
                             . ...+. .+.......       +.....++.++|+|+++++++........|+++++.+ |..
T Consensus       216 -------~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~  279 (372)
T 3slg_A          216 -------S-SRVVTQFLGHIVRGENISLVDGGSQKRAFTYVDDGISALMKIIENSNGVATGKIYNIGNPNNN  279 (372)
T ss_dssp             -------S-CHHHHHHHHHHHHTCCEEEGGGGCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCTTCE
T ss_pred             -------c-chHHHHHHHHHHcCCCcEEeCCCceEEEEEEHHHHHHHHHHHHhcccCcCCCceEEeCCCCCC
Confidence                   0 01111 111111110       1222356789999999999998764445799999998 543

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=99.87  E-value=8.5e-22  Score=179.16  Aligned_cols=229  Identities=14%  Similarity=0.128  Sum_probs=155.4

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcC-CeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCC
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHG-AKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGR  106 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g-~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~  106 (305)
                      .++++++|||||+|+||+++++.|+++| +.|++++|+......  ..+.+  +. +.+|++|.++++.+++.  ..+++
T Consensus        43 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~--~~~~~--~~-~~~d~~~~~~~~~~~~~--~~~~~  115 (357)
T 2x6t_A           43 GIEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF--VNLVD--LN-IADYMDKEDFLIQIMAG--EEFGD  115 (357)
T ss_dssp             -----CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGGG--GGTTT--SC-CSEEEEHHHHHHHHHTT--CCCSS
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcchh--hcccC--ce-EeeecCcHHHHHHHHhh--cccCC
Confidence            4567899999999999999999999999 899999887654211  11111  22 67899998888877653  12457


Q ss_pred             ccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCC---------
Q 021960          107 LDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGL---------  177 (305)
Q Consensus       107 id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~---------  177 (305)
                      +|+|||+||....          +.+++++.+++|+.++.++++++.+    .+. +||++||.+.+.+.+         
T Consensus       116 ~d~Vih~A~~~~~----------~~~~~~~~~~~n~~~~~~ll~a~~~----~~~-r~V~~SS~~v~g~~~~~~~~E~~~  180 (357)
T 2x6t_A          116 VEAIFHEGACSST----------TEWDGKYMMDNNYQYSKELLHYCLE----REI-PFLYASSAATYGGRTSDFIESREY  180 (357)
T ss_dssp             CCEEEECCSCCCT----------TCCCHHHHHHHTHHHHHHHHHHHHH----HTC-CEEEEEEGGGGCSCSSCCCSSGGG
T ss_pred             CCEEEECCcccCC----------ccCCHHHHHHHHHHHHHHHHHHHHH----cCC-eEEEEcchHHhCCCCCCCcCCcCC
Confidence            9999999996432          1234677899999999999988876    344 899999987654322         


Q ss_pred             --CCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHH-
Q 021960          178 --GPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFV-  254 (305)
Q Consensus       178 --~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  254 (305)
                        ....|+.+|.+.+.+++.++.+   .+++++.++||.+.++........             .-.....+..+..-. 
T Consensus       181 ~~p~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~Gp~~~~~~~~-------------~~~~~~~~~~~~~~~~  244 (357)
T 2x6t_A          181 EKPLNVFGYSKFLFDEYVRQILPE---ANSQIVGFRYFNVYGPREGHKGSM-------------ASVAFHLNTQLNNGES  244 (357)
T ss_dssp             CCCSSHHHHHHHHHHHHHHHHGGG---CSSCEEEEEECEEESSSCTTCGGG-------------SCHHHHHHHHHHTTCC
T ss_pred             CCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEecCeEECCCCCCCccc-------------chHHHHHHHHHHcCCC
Confidence              2568999999999999998876   479999999999988752210000             000001111111000 


Q ss_pred             -hhc--CCC-CCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          255 -SGL--GNL-KGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       255 -~~~--~~~-~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                       ..+  +.. ...++.++|+|++++++++...    |+++++.+|...
T Consensus       245 ~~~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~----~~~~~i~~~~~~  288 (357)
T 2x6t_A          245 PKLFEGSENFKRDFVYVGDVADVNLWFLENGV----SGIFNLGTGRAE  288 (357)
T ss_dssp             CEEETTGGGCEECEEEHHHHHHHHHHHHHHCC----CEEEEESCSCCE
T ss_pred             cEEeCCCCcceEccEEHHHHHHHHHHHHhcCC----CCeEEecCCCcc
Confidence             000  011 3356789999999999998653    889999887543

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.87  E-value=1.2e-21  Score=171.27  Aligned_cols=192  Identities=17%  Similarity=0.122  Sum_probs=146.0

Q ss_pred             CEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEEE
Q 021960           32 KVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILY  111 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~li  111 (305)
                      |++|||||+|+||+++++.|+++|++|++++|+.....       ...+.++.+|++|.++++++++       .+|+||
T Consensus         3 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-------~~~~~~~~~Dl~d~~~~~~~~~-------~~d~vi   68 (267)
T 3ay3_A            3 NRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA-------EAHEEIVACDLADAQAVHDLVK-------DCDGII   68 (267)
T ss_dssp             EEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCC-------CTTEEECCCCTTCHHHHHHHHT-------TCSEEE
T ss_pred             ceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc-------CCCccEEEccCCCHHHHHHHHc-------CCCEEE
Confidence            68999999999999999999999999999999764321       1247889999999998888775       599999


Q ss_pred             EcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCC------------CC
Q 021960          112 NNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGL------------GP  179 (305)
Q Consensus       112 ~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~------------~~  179 (305)
                      ||||...            .+.+++.+++|+.++.++++++.+    .+.++||++||...+.+.+            ..
T Consensus        69 ~~a~~~~------------~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~iv~~SS~~~~~~~~~~~~~~E~~~~~~~  132 (267)
T 3ay3_A           69 HLGGVSV------------ERPWNDILQANIIGAYNLYEAARN----LGKPRIVFASSNHTIGYYPRTTRIDTEVPRRPD  132 (267)
T ss_dssp             ECCSCCS------------CCCHHHHHHHTHHHHHHHHHHHHH----TTCCEEEEEEEGGGSTTSBTTSCBCTTSCCCCC
T ss_pred             ECCcCCC------------CCCHHHHHHHHHHHHHHHHHHHHH----hCCCEEEEeCCHHHhCCCCCCCCCCCCCCCCCC
Confidence            9999641            123577899999999998888754    4567999999987654332            34


Q ss_pred             ccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccc-cccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcC
Q 021960          180 HAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVA-TSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLG  258 (305)
Q Consensus       180 ~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (305)
                      ..|+.+|++.+.+++.++.+   .+++++.++||.+. ++..                       .+   .         
T Consensus       133 ~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrp~~v~~~~~~-----------------------~~---~---------  174 (267)
T 3ay3_A          133 SLYGLSKCFGEDLASLYYHK---FDIETLNIRIGSCFPKPKD-----------------------AR---M---------  174 (267)
T ss_dssp             SHHHHHHHHHHHHHHHHHHT---TCCCEEEEEECBCSSSCCS-----------------------HH---H---------
T ss_pred             ChHHHHHHHHHHHHHHHHHH---cCCCEEEEeceeecCCCCC-----------------------CC---e---------
Confidence            78999999999999988654   58999999999983 3210                       00   0         


Q ss_pred             CCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCC
Q 021960          259 NLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGG  295 (305)
Q Consensus       259 ~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG  295 (305)
                        ...++.++|+|+.++.++....  ..+.++.+.++
T Consensus       175 --~~~~~~~~dva~~~~~~~~~~~--~~~~~~~~~~~  207 (267)
T 3ay3_A          175 --MATWLSVDDFMRLMKRAFVAPK--LGCTVVYGASA  207 (267)
T ss_dssp             --HHHBCCHHHHHHHHHHHHHSSC--CCEEEEEECCS
T ss_pred             --eeccccHHHHHHHHHHHHhCCC--CCceeEecCCC
Confidence              1235689999999999987652  12344554433

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.87  E-value=1.1e-20  Score=172.42  Aligned_cols=228  Identities=13%  Similarity=0.090  Sum_probs=152.3

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchh--hhHhhhc-----CCCCeEEEEecCCCHHHHHHHHHHHHHh
Q 021960           31 GKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLG--SVLASTL-----APAPVTFVHCDVSLEEDIENLINSTVSR  103 (305)
Q Consensus        31 ~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~--~~~~~~~-----~~~~v~~~~~D~~d~~~i~~~~~~~~~~  103 (305)
                      +|++|||||+|+||+++++.|+++|++|++++|+....  +.+....     .+.++.++.+|++|.++++++++..   
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---   77 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV---   77 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH---
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhc---
Confidence            36899999999999999999999999999999875431  1111111     1246889999999999999888765   


Q ss_pred             cCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCC-------
Q 021960          104 YGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGG-------  176 (305)
Q Consensus       104 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~-------  176 (305)
                        ++|+||||||....        +.+.+++++.+++|+.++.++++.+.+...+ +.++||++||.+.+.+.       
T Consensus        78 --~~d~vih~A~~~~~--------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~iv~~SS~~v~g~~~~~~~~E  146 (372)
T 1db3_A           78 --QPDEVYNLGAMSHV--------AVSFESPEYTADVDAMGTLRLLEAIRFLGLE-KKTRFYQASTSELYGLVQEIPQKE  146 (372)
T ss_dssp             --CCSEEEECCCCCTT--------TTTTSCHHHHHHHHTHHHHHHHHHHHHTTCT-TTCEEEEEEEGGGGTTCCSSSBCT
T ss_pred             --CCCEEEECCcccCc--------cccccCHHHHHHHHHHHHHHHHHHHHHhCCC-CCcEEEEeCChhhhCCCCCCCCCc
Confidence              69999999997532        1233456788999999999999988764322 23799999997654321       


Q ss_pred             ----CCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHH-HHH
Q 021960          177 ----LGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVR-KME  251 (305)
Q Consensus       177 ----~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  251 (305)
                          .....|+.+|++.+.+++.++.++   ++.+..+.|..+..+.....+                  ....+. .+.
T Consensus       147 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~r~~~~~gp~~~~~~------------------~~~~~~~~~~  205 (372)
T 1db3_A          147 TTPFYPRSPYAVAKLYAYWITVNYRESY---GMYACNGILFNHESPRRGETF------------------VTRKITRAIA  205 (372)
T ss_dssp             TSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTSCTTS------------------HHHHHHHHHH
T ss_pred             cCCCCCCChHHHHHHHHHHHHHHHHHHh---CCCeEEEEECCccCCCCCCcc------------------hhhHHHHHHH
Confidence                235689999999999999999885   566666666555443211000                  000011 111


Q ss_pred             HHHhhc--------CCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCcc
Q 021960          252 EFVSGL--------GNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT  297 (305)
Q Consensus       252 ~~~~~~--------~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~  297 (305)
                      ......        +.....++.++|+|++++.++....    ++++++.+|..
T Consensus       206 ~~~~g~~~~~~~g~~~~~~~~i~v~Dva~a~~~~~~~~~----~~~~ni~~~~~  255 (372)
T 1db3_A          206 NIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMMLQQEQ----PEDFVIATGVQ  255 (372)
T ss_dssp             HHHTTSCCCEEESCTTCEECCEEHHHHHHHHHHTTSSSS----CCCEEECCCCC
T ss_pred             HHHcCCCCceeecCCCceeeeeEHHHHHHHHHHHHhcCC----CceEEEcCCCc
Confidence            111110        1122346789999999999887542    46788777653

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.87  E-value=9.4e-21  Score=170.50  Aligned_cols=226  Identities=14%  Similarity=0.064  Sum_probs=156.7

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchh--hhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLG--SVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRL  107 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~--~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~i  107 (305)
                      .++++|||||+|+||+++++.|+++|++|++++|+....  ..+.......++.++.+|++|.++++++++..     ++
T Consensus        13 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~   87 (335)
T 1rpn_A           13 MTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKA-----QP   87 (335)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHH-----CC
T ss_pred             cCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhccccCceEEEECCCCCHHHHHHHHHHc-----CC
Confidence            467999999999999999999999999999999876532  11211112345889999999999999888765     69


Q ss_pred             cEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-CCEEEEecccccccCCC---------
Q 021960          108 DILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRG-GGCIISTASVAGVMGGL---------  177 (305)
Q Consensus       108 d~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~---------  177 (305)
                      |+|||+||....        +.+.+++++.+++|+.++.++++++.+.    + .++||++||.+.+.+..         
T Consensus        88 d~Vih~A~~~~~--------~~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~~~~~v~~SS~~v~g~~~~~~~~E~~~  155 (335)
T 1rpn_A           88 QEVYNLAAQSFV--------GASWNQPVTTGVVDGLGVTHLLEAIRQF----SPETRFYQASTSEMFGLIQAERQDENTP  155 (335)
T ss_dssp             SEEEECCSCCCH--------HHHTTSHHHHHHHHTHHHHHHHHHHHHH----CTTSEEEEEEEGGGGCSCSSSSBCTTSC
T ss_pred             CEEEECccccch--------hhhhhChHHHHHHHHHHHHHHHHHHHHh----CCCCeEEEEeCHHHhCCCCCCCCCcccC
Confidence            999999996421        0112346788999999999998887653    4 37999999976553321         


Q ss_pred             --CCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHH-HHHHHH
Q 021960          178 --GPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVR-KMEEFV  254 (305)
Q Consensus       178 --~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  254 (305)
                        ....|+.+|.+.+.+++.++.++   ++.+..+.|+.+..+.....+.                  ...+. .+....
T Consensus       156 ~~p~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~v~Gp~~~~~~~------------------~~~~~~~~~~~~  214 (335)
T 1rpn_A          156 FYPRSPYGVAKLYGHWITVNYRESF---GLHASSGILFNHESPLRGIEFV------------------TRKVTDAVARIK  214 (335)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTSCTTSH------------------HHHHHHHHHHHH
T ss_pred             CCCCChhHHHHHHHHHHHHHHHHHc---CCcEEEEeeCcccCCCCCCCcc------------------hHHHHHHHHHHH
Confidence              24589999999999999998775   6888888998876653211000                  00011 111111


Q ss_pred             hhc------C--CCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCcc
Q 021960          255 SGL------G--NLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT  297 (305)
Q Consensus       255 ~~~------~--~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~  297 (305)
                      ...      +  .....++.++|+|++++.++....    ++++++.+|..
T Consensus       215 ~g~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~----~~~~ni~~~~~  261 (335)
T 1rpn_A          215 LGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQDK----ADDYVVATGVT  261 (335)
T ss_dssp             TTSCSCEEESCTTCEEECEEHHHHHHHHHHHHHSSS----CCCEEECCSCE
T ss_pred             cCCCceEEeCCCcceeceEEHHHHHHHHHHHHhcCC----CCEEEEeCCCC
Confidence            110      0  112235688999999999987653    46788877754

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.87  E-value=1.4e-20  Score=172.13  Aligned_cols=227  Identities=13%  Similarity=0.052  Sum_probs=156.7

Q ss_pred             CEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchh--hhHhhhc------CCCCeEEEEecCCCHHHHHHHHHHHHHh
Q 021960           32 KVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLG--SVLASTL------APAPVTFVHCDVSLEEDIENLINSTVSR  103 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~--~~~~~~~------~~~~v~~~~~D~~d~~~i~~~~~~~~~~  103 (305)
                      |++|||||+|+||+++++.|+++|++|++++|+....  ..+....      ...++.++.+|++|.++++++++.+   
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---  101 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV---  101 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH---
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhc---
Confidence            6899999999999999999999999999999875431  1111110      1345889999999999999888765   


Q ss_pred             cCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccC--------
Q 021960          104 YGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMG--------  175 (305)
Q Consensus       104 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~--------  175 (305)
                        ++|+||||||....        ..+.+++++.+++|+.++.++++++.+... ++.++||++||.+.+..        
T Consensus       102 --~~d~vih~A~~~~~--------~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~-~~~~~iv~~SS~~~~~~~~~~~~~E  170 (375)
T 1t2a_A          102 --KPTEIYNLGAQSHV--------KISFDLAEYTADVDGVGTLRLLDAVKTCGL-INSVKFYQASTSELYGKVQEIPQKE  170 (375)
T ss_dssp             --CCSEEEECCSCCCH--------HHHHHSHHHHHHHHTHHHHHHHHHHHHTTC-TTTCEEEEEEEGGGTCSCSSSSBCT
T ss_pred             --CCCEEEECCCcccc--------cccccCHHHHHHHHHHHHHHHHHHHHHhCC-CccceEEEecchhhhCCCCCCCCCc
Confidence              69999999996421        113466788999999999999998876442 12379999999876542        


Q ss_pred             ---CCCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHH-HHHH
Q 021960          176 ---GLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEV-RKME  251 (305)
Q Consensus       176 ---~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  251 (305)
                         ......|+.+|++.+.+++.++.++   ++.+..+.|+.+..+.....+.                  ...+ ..+.
T Consensus       171 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~~~gp~~~~~~~------------------~~~~~~~~~  229 (375)
T 1t2a_A          171 TTPFYPRSPYGAAKLYAYWIVVNFREAY---NLFAVNGILFNHESPRRGANFV------------------TRKISRSVA  229 (375)
T ss_dssp             TSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCTTSH------------------HHHHHHHHH
T ss_pred             cCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEecccccCCCCCCCcc------------------hHHHHHHHH
Confidence               1235689999999999999999875   6887778887665543110000                  0000 1111


Q ss_pred             HHHhhc--------CCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCcc
Q 021960          252 EFVSGL--------GNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT  297 (305)
Q Consensus       252 ~~~~~~--------~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~  297 (305)
                      ......        ......++.++|+|++++.++....    ++++++.+|..
T Consensus       230 ~~~~g~~~~~~~g~~~~~~~~i~v~Dva~a~~~~~~~~~----~~~~ni~~~~~  279 (375)
T 1t2a_A          230 KIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQNDE----PEDFVIATGEV  279 (375)
T ss_dssp             HHHHTSCSCEEESCTTCEECCEEHHHHHHHHHHHHHSSS----CCCEEECCSCC
T ss_pred             HHHcCCCceeEeCCCCceeeeEEHHHHHHHHHHHHhcCC----CceEEEeCCCc
Confidence            111110        0122346789999999999987642    35677766643

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.87  E-value=2.1e-20  Score=171.41  Aligned_cols=229  Identities=16%  Similarity=0.045  Sum_probs=156.6

Q ss_pred             CEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcch-----hhhHhhhc--CCC-CeEEEEecCCCHHHHHHHHHHHHHh
Q 021960           32 KVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTL-----GSVLASTL--APA-PVTFVHCDVSLEEDIENLINSTVSR  103 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~-----~~~~~~~~--~~~-~v~~~~~D~~d~~~i~~~~~~~~~~  103 (305)
                      |++|||||+|+||+++++.|+++|++|++++|+...     .+.+....  .+. ++.++.+|++|.++++++++.+   
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---  105 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVI---  105 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHH---
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhc---
Confidence            689999999999999999999999999999987543     11111000  012 5889999999999999888765   


Q ss_pred             cCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC-CCCEEEEeccccccc--------
Q 021960          104 YGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINR-GGGCIISTASVAGVM--------  174 (305)
Q Consensus       104 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~isS~~~~~--------  174 (305)
                        ++|+|||+||....        +.+.++++..+++|+.++.++++++.+...++ +.++||++||.+.+-        
T Consensus       106 --~~d~Vih~A~~~~~--------~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~E  175 (381)
T 1n7h_A          106 --KPDEVYNLAAQSHV--------AVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSE  175 (381)
T ss_dssp             --CCSEEEECCSCCCH--------HHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCT
T ss_pred             --CCCEEEECCcccCc--------cccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCCCCCC
Confidence              69999999996421        12356788899999999999999998876542 346999999987543        


Q ss_pred             --CCCCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHH-HHHH
Q 021960          175 --GGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEV-RKME  251 (305)
Q Consensus       175 --~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  251 (305)
                        +......|+.+|++.+.+++.++.++   ++.+..+.|..+..+.....+.                  ...+ ..+.
T Consensus       176 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~~r~~~~~gp~~~~~~~------------------~~~~~~~~~  234 (381)
T 1n7h_A          176 TTPFHPRSPYAASKCAAHWYTVNYREAY---GLFACNGILFNHESPRRGENFV------------------TRKITRALG  234 (381)
T ss_dssp             TSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCTTSH------------------HHHHHHHHH
T ss_pred             CCCCCCCCchHHHHHHHHHHHHHHHHHh---CCcEEEEEeCceeCCCCCCcch------------------hHHHHHHHH
Confidence              23346789999999999999999875   4544444443332221100000                  0000 0111


Q ss_pred             HHHhhc--------CCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          252 EFVSGL--------GNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       252 ~~~~~~--------~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      ......        +.....++.++|+|++++++++...    ++++++.+|...
T Consensus       235 ~~~~g~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~~~----~~~~~i~~~~~~  285 (381)
T 1n7h_A          235 RIKVGLQTKLFLGNLQASRDWGFAGDYVEAMWLMLQQEK----PDDYVVATEEGH  285 (381)
T ss_dssp             HHHHTSCCCEEESCTTCEEECEEHHHHHHHHHHHHTSSS----CCEEEECCSCEE
T ss_pred             HHHcCCCCeEEeCCCCceeeeEEHHHHHHHHHHHHhCCC----CCeEEeeCCCCC
Confidence            111110        1223346789999999999998653    478888888543

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=99.87  E-value=1.3e-20  Score=173.55  Aligned_cols=170  Identities=20%  Similarity=0.170  Sum_probs=131.9

Q ss_pred             CCEEEEecCCCchHHHHHHHHH-HcCCeEEEEecCcch---------hhhHh---hhcC----CCC---eEEEEecCCCH
Q 021960           31 GKVAIITGGARGIGEAAVRLFA-RHGAKVVIADVEDTL---------GSVLA---STLA----PAP---VTFVHCDVSLE   90 (305)
Q Consensus        31 ~k~vlVtGas~giG~~ia~~l~-~~g~~vv~~~r~~~~---------~~~~~---~~~~----~~~---v~~~~~D~~d~   90 (305)
                      ++++|||||+|+||+++++.|+ ++|++|++++|+...         .+.+.   +.+.    ..+   +.++.+|++|.
T Consensus         2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~   81 (397)
T 1gy8_A            2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (397)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCH
Confidence            4589999999999999999999 999999999886543         12221   1111    124   88999999999


Q ss_pred             HHHHHHHHHHHHhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEeccc
Q 021960           91 EDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASV  170 (305)
Q Consensus        91 ~~i~~~~~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~  170 (305)
                      +++++++++    ++++|+||||||.....        .+.+++++.+++|+.++.++++++..    .+.++||++||.
T Consensus        82 ~~~~~~~~~----~~~~d~vih~A~~~~~~--------~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~~~~iv~~SS~  145 (397)
T 1gy8_A           82 DFLNGVFTR----HGPIDAVVHMCAFLAVG--------ESVRDPLKYYDNNVVGILRLLQAMLL----HKCDKIIFSSSA  145 (397)
T ss_dssp             HHHHHHHHH----SCCCCEEEECCCCCCHH--------HHHHCHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEEEEG
T ss_pred             HHHHHHHHh----cCCCCEEEECCCccCcC--------cchhhHHHHHHHHhHHHHHHHHHHHH----hCCCEEEEECCH
Confidence            998877753    45699999999974210        13456788999999999998887643    456799999996


Q ss_pred             ccccCCC------------------CCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCcccccc
Q 021960          171 AGVMGGL------------------GPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSM  219 (305)
Q Consensus       171 ~~~~~~~------------------~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~  219 (305)
                      +.+-...                  ....|+.+|++.+.+++.++.++   ++++++++||.+..+.
T Consensus       146 ~v~g~~~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ilRp~~v~G~~  209 (397)
T 1gy8_A          146 AIFGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY---GIKGICLRYFNACGAH  209 (397)
T ss_dssp             GGTBSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECCC
T ss_pred             HHhCCCCcccccccccCcCccCCCCCCCchHHHHHHHHHHHHHHHHHH---CCcEEEEeccceeCCC
Confidence            5542211                  25689999999999999999886   7999999999998774

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.87  E-value=7.1e-22  Score=215.49  Aligned_cols=175  Identities=17%  Similarity=0.182  Sum_probs=135.5

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCe-EEEEecCcchhh---hHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHh
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAK-VVIADVEDTLGS---VLASTL--APAPVTFVHCDVSLEEDIENLINSTVSR  103 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~-vv~~~r~~~~~~---~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~  103 (305)
                      .+|++|||||++|||+++|+.|+++|++ |++++|+....+   ...+.+  .+.++.++.||++|.++++++++++.+ 
T Consensus      1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~- 1961 (2512)
T 2vz8_A         1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEATQ- 1961 (2512)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHHH-
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHHh-
Confidence            6899999999999999999999999997 778888754432   111111  356788999999999999999999874 


Q ss_pred             cCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccch
Q 021960          104 YGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYT  183 (305)
Q Consensus       104 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~  183 (305)
                      +++||+||||||....    ..+.+++.++|++.+++|+.+++++.+.+.+.|.+  .++||++||.++..+.+++..|+
T Consensus      1962 ~g~id~lVnnAgv~~~----~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~--~g~iV~iSS~ag~~g~~g~~~Y~ 2035 (2512)
T 2vz8_A         1962 LGPVGGVFNLAMVLRD----AVLENQTPEFFQDVSKPKYSGTANLDRVTREACPE--LDYFVIFSSVSCGRGNAGQANYG 2035 (2512)
T ss_dssp             HSCEEEEEECCCC--------------------CTTTTHHHHHHHHHHHHHHCTT--CCEEEEECCHHHHTTCTTCHHHH
T ss_pred             cCCCcEEEECCCcCCC----CchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhccc--CCEEEEecchhhcCCCCCcHHHH
Confidence            7899999999997643    56788999999999999999999999999888743  48999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHCcCCcEEEEEeCCcc
Q 021960          184 ASKHAIVGLTKNAACELGRYGIRVNCISPFGV  215 (305)
Q Consensus       184 ~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v  215 (305)
                      ++|+++++|++.++.+    |....++..|.+
T Consensus      2036 aaKaal~~l~~~rr~~----Gl~~~a~~~g~~ 2063 (2512)
T 2vz8_A         2036 FANSAMERICEKRRHD----GLPGLAVQWGAI 2063 (2512)
T ss_dssp             HHHHHHHHHHHHHHHT----TSCCCEEEECCB
T ss_pred             HHHHHHHHHHHHHHHC----CCcEEEEEccCc
Confidence            9999999999987765    666667776655

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=99.86  E-value=8.3e-21  Score=171.33  Aligned_cols=226  Identities=16%  Similarity=0.109  Sum_probs=157.3

Q ss_pred             CEEEEecCCCchHHHHHHHHHHc-CCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCC-HHHHHHHHHHHHHhcCCccE
Q 021960           32 KVAIITGGARGIGEAAVRLFARH-GAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSL-EEDIENLINSTVSRYGRLDI  109 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~-g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d-~~~i~~~~~~~~~~~g~id~  109 (305)
                      +++|||||+|+||+++++.|+++ |++|++++|+......+   ....++.++.+|++| .+.++++++       .+|+
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~-------~~d~   70 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRF---LNHPHFHFVEGDISIHSEWIEYHVK-------KCDV   70 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGG---TTCTTEEEEECCTTTCSHHHHHHHH-------HCSE
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHh---hcCCCeEEEeccccCcHHHHHhhcc-------CCCE
Confidence            47999999999999999999998 89999999976543322   223468899999998 456666654       4899


Q ss_pred             EEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCC------------
Q 021960          110 LYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGL------------  177 (305)
Q Consensus       110 li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~------------  177 (305)
                      |||+||.....        ...+++++.+++|+.++.++++.+..    .+ .+||++||.+.+-..+            
T Consensus        71 vih~A~~~~~~--------~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~v~~SS~~v~g~~~~~~~~e~~~~~~  137 (345)
T 2bll_A           71 VLPLVAIATPI--------EYTRNPLRVFELDFEENLRIIRYCVK----YR-KRIIFPSTSEVYGMCSDKYFDEDHSNLI  137 (345)
T ss_dssp             EEECBCCCCHH--------HHHHSHHHHHHHHTHHHHHHHHHHHH----TT-CEEEEECCGGGGBTCCCSSBCTTTCCCB
T ss_pred             EEEcccccCcc--------chhcCHHHHHHHHHHHHHHHHHHHHH----hC-CeEEEEecHHHcCCCCCCCcCCcccccc
Confidence            99999964210        11245677899999999888877754    44 7999999976542211            


Q ss_pred             ------CCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHH-HH
Q 021960          178 ------GPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVR-KM  250 (305)
Q Consensus       178 ------~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  250 (305)
                            ....|+.+|.+.+.+++.++.+.   +++++.++||.+.++...........            . ...+. .+
T Consensus       138 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~v~G~~~~~~~~~~~~------------~-~~~~~~~~  201 (345)
T 2bll_A          138 VGPVNKPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGPRLDNLNAARIG------------S-SRAITQLI  201 (345)
T ss_dssp             CCCTTCGGGHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEECSSCCCTTCSBSC------------B-CHHHHHHH
T ss_pred             cCcccCcccccHHHHHHHHHHHHHHHHhc---CCCEEEEcCCcccCCCcccccccccc------------c-ccHHHHHH
Confidence                  12379999999999999998774   79999999999988753211000000            0 00111 11


Q ss_pred             HHHHhhc-------CCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCc
Q 021960          251 EEFVSGL-------GNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGV  296 (305)
Q Consensus       251 ~~~~~~~-------~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~  296 (305)
                      .......       +.....++.++|+|+++++++.......+|+++++.+|.
T Consensus       202 ~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~g~~~~i~~~~  254 (345)
T 2bll_A          202 LNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPE  254 (345)
T ss_dssp             HHHHHTCCEEEGGGSCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCTT
T ss_pred             HHHHcCCCcEEECCCCEEEEEEEHHHHHHHHHHHHhhccccCCCceEEeCCCC
Confidence            1111110       112234679999999999999765434579999999873

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=99.86  E-value=1.6e-20  Score=168.67  Aligned_cols=231  Identities=16%  Similarity=0.110  Sum_probs=158.8

Q ss_pred             CEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEEE
Q 021960           32 KVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILY  111 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~li  111 (305)
                      +++|||||+|+||+++++.|+++|++|++++|+.....   +.+. .++.++.+|++|.+++++++++     ..+|+||
T Consensus         2 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~~~-~~~~~~~~D~~~~~~~~~~~~~-----~~~d~vi   72 (330)
T 2c20_A            2 NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHE---DAIT-EGAKFYNGDLRDKAFLRDVFTQ-----ENIEAVM   72 (330)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCG---GGSC-TTSEEEECCTTCHHHHHHHHHH-----SCEEEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCch---hhcC-CCcEEEECCCCCHHHHHHHHhh-----cCCCEEE
Confidence            57999999999999999999999999999988654322   1122 2588899999999998887764     3799999


Q ss_pred             EcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccC-----------CCCCc
Q 021960          112 NNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMG-----------GLGPH  180 (305)
Q Consensus       112 ~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~-----------~~~~~  180 (305)
                      |+||....        ..+.+++++.+++|+.++.++++++..    .+.++||++||.+.+..           .....
T Consensus        73 h~a~~~~~--------~~~~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~~v~~Ss~~~~~~~~~~~~~E~~~~~~~~  140 (330)
T 2c20_A           73 HFAADSLV--------GVSMEKPLQYYNNNVYGALCLLEVMDE----FKVDKFIFSSTAATYGEVDVDLITEETMTNPTN  140 (330)
T ss_dssp             ECCCCCCH--------HHHHHSHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEECCGGGGCSCSSSSBCTTSCCCCSS
T ss_pred             ECCcccCc--------cccccCHHHHHHHHhHHHHHHHHHHHH----cCCCEEEEeCCceeeCCCCCCCCCcCCCCCCCC
Confidence            99996421        013456788999999999888887643    45679999999765432           12357


Q ss_pred             cchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhc---
Q 021960          181 AYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGL---  257 (305)
Q Consensus       181 ~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  257 (305)
                      .|+.+|.+.+.+++.++.++   +++++.++||.+..+.....+... ..           +....+..+.......   
T Consensus       141 ~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~v~G~~~~~~~g~~-~~-----------~~~~~~~~~~~~~~~~~~~  205 (330)
T 2c20_A          141 TYGETKLAIEKMLHWYSQAS---NLRYKIFRYFNVAGATPNGIIGED-HR-----------PETHLIPLVLQVALGQREK  205 (330)
T ss_dssp             HHHHHHHHHHHHHHHHHHTS---SCEEEEEECSEEECCCTTCSSCCC-CS-----------SCCSHHHHHHHHHTTSSSC
T ss_pred             hHHHHHHHHHHHHHHHHHHh---CCcEEEEecCcccCCCCcCccccc-cc-----------cccchHHHHHHHHhhcCCC
Confidence            89999999999999998774   899999999999877421111000 00           0000111111111100   


Q ss_pred             ------------CCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          258 ------------GNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       258 ------------~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                                  +.....++.++|+|++++.++......-.++++++.+|...
T Consensus       206 ~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~  258 (330)
T 2c20_A          206 IMMFGDDYNTPDGTCIRDYIHVEDLVAAHFLGLKDLQNGGESDFYNLGNGNGF  258 (330)
T ss_dssp             EEEECSCCSSSSSSCEECEEEHHHHHHHHHHHHHHHHTTCCCEEEECCCTTCB
T ss_pred             eEEeCCccccCCCceeEeeEeHHHHHHHHHHHHhccccCCCCCeEEeCCCCCc
Confidence                        01122456799999999988864321123688988777543

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.86  E-value=4.4e-21  Score=173.25  Aligned_cols=171  Identities=19%  Similarity=0.183  Sum_probs=130.2

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcC-------CeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHH
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHG-------AKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINST  100 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g-------~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~  100 (305)
                      .++++++|||||+|+||+++++.|+++|       ++|++++|+......    ....++.++.+|++|.++++++++  
T Consensus        11 ~~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~----~~~~~~~~~~~Dl~d~~~~~~~~~--   84 (342)
T 2hrz_A           11 YFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA----GFSGAVDARAADLSAPGEAEKLVE--   84 (342)
T ss_dssp             CCSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT----TCCSEEEEEECCTTSTTHHHHHHH--
T ss_pred             CccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc----ccCCceeEEEcCCCCHHHHHHHHh--
Confidence            5678999999999999999999999999       899999987543221    123458889999999998888775  


Q ss_pred             HHhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC-CCCEEEEecccccccCC-C-
Q 021960          101 VSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINR-GGGCIISTASVAGVMGG-L-  177 (305)
Q Consensus       101 ~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~isS~~~~~~~-~-  177 (305)
                          +.+|+||||||...         ..+.+++++.+++|+.++.++++++.+...+. +.++||++||.+.+.+. + 
T Consensus        85 ----~~~d~vih~A~~~~---------~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~  151 (342)
T 2hrz_A           85 ----ARPDVIFHLAAIVS---------GEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLPY  151 (342)
T ss_dssp             ----TCCSEEEECCCCCH---------HHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCCS
T ss_pred             ----cCCCEEEECCccCc---------ccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCCCC
Confidence                37999999999642         12346788999999999999999887643222 25799999998765432 1 


Q ss_pred             ---------CCccchhhHHHHHHHHHHHHHHHC--cCCcEEEEEe--CCcccc
Q 021960          178 ---------GPHAYTASKHAIVGLTKNAACELG--RYGIRVNCIS--PFGVAT  217 (305)
Q Consensus       178 ---------~~~~Y~~sKaa~~~~~~~la~e~~--~~~i~v~~v~--PG~v~T  217 (305)
                               ....|+.+|++.+.+++.++.+..  ...++++.|.  ||.+.+
T Consensus       152 ~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~  204 (342)
T 2hrz_A          152 PIPDEFHTTPLTSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNA  204 (342)
T ss_dssp             SBCTTCCCCCSSHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCC
T ss_pred             CcCCCCCCCCcchHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcc
Confidence                     467899999999999999887631  1235555555  766544

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=99.86  E-value=5.5e-21  Score=172.18  Aligned_cols=189  Identities=13%  Similarity=0.031  Sum_probs=142.5

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHH-HcCCeEEEEecCcchhh------------hHhhh--cCCCCeEEEEecCCCHHH
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFA-RHGAKVVIADVEDTLGS------------VLAST--LAPAPVTFVHCDVSLEED   92 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~-~~g~~vv~~~r~~~~~~------------~~~~~--~~~~~v~~~~~D~~d~~~   92 (305)
                      .+.+|++||||||+|||++++..|+ ..|+.++++.+.....+            .+.+.  ..+.+...+.||++|.++
T Consensus        47 ~~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~  126 (401)
T 4ggo_A           47 AKAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEI  126 (401)
T ss_dssp             SCCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHH
T ss_pred             cCCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHH
Confidence            4568999999999999999999999 68999998877543321            11111  135568899999999999


Q ss_pred             HHHHHHHHHHhcCCccEEEEcCCCCCCCCCC------------------------------CcccCCCHHHHHHHHHHHh
Q 021960           93 IENLINSTVSRYGRLDILYNNAGVLGNQRKH------------------------------KSIIDFDADEFDNVMRVNV  142 (305)
Q Consensus        93 i~~~~~~~~~~~g~id~li~nag~~~~~~~~------------------------------~~~~~~~~~~~~~~~~~n~  142 (305)
                      ++++++++.+.+|+||+||||++......+.                              ..+...+.++++....+.-
T Consensus       127 i~~vi~~i~~~~G~IDiLVhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~ldt~~~~i~~~~l~pat~eeie~T~~vMg  206 (401)
T 4ggo_A          127 KAQVIEEAKKKGIKFDLIVYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTVDPFTGELKEISAEPANDEEAAATVKVMG  206 (401)
T ss_dssp             HHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEECTTTCCEEEEEECCCCHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHhcCCCCEEEEecccccccCCCCCceeeeeecccccccccccccccccccccccccCCcHHHHHHHHHHHh
Confidence            9999999999999999999999975311000                              0123346778877777765


Q ss_pred             HHHHH-HHHHH--HHHHHcCCCCEEEEecccccccCCCC--CccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCcccc
Q 021960          143 KGMAL-GIKHA--ARVMINRGGGCIISTASVAGVMGGLG--PHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVAT  217 (305)
Q Consensus       143 ~~~~~-l~~~~--~~~~~~~~~~~iv~isS~~~~~~~~~--~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T  217 (305)
                      .+.+. +.+++  .++|  ..++++|.+|+..+....|.  .+.+|.+|++|+..++.|+.+++  ++++++++||.+.|
T Consensus       207 ~s~~s~w~~al~~a~ll--a~G~siva~SYiGse~t~P~Y~~G~mG~AKaaLEa~~r~La~eL~--~~~a~v~v~~a~vT  282 (401)
T 4ggo_A          207 GEDWERWIKQLSKEGLL--EEGCITLAYSYIGPEATQALYRKGTIGKAKEHLEATAHRLNKENP--SIRAFVSVNKGLVT  282 (401)
T ss_dssp             SHHHHHHHHHHHHTTCE--EEEEEEEEEECCCCGGGHHHHTTSHHHHHHHHHHHHHHHHHHHCT--TEEEEEEECCCCCC
T ss_pred             hhHHHHHHHHHHhhhcc--cCCceEEEEeccCcceeecCCCccHHHHHHHHHHHHHHHHHHhcC--CCcEEEEEcCcccc
Confidence            55432 23333  3333  45689999999988765553  35799999999999999999986  48999999999999


Q ss_pred             ccc
Q 021960          218 SML  220 (305)
Q Consensus       218 ~~~  220 (305)
                      .-.
T Consensus       283 ~As  285 (401)
T 4ggo_A          283 RAS  285 (401)
T ss_dssp             TTG
T ss_pred             chh
Confidence            753

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.86  E-value=4.4e-21  Score=171.28  Aligned_cols=212  Identities=15%  Similarity=0.067  Sum_probs=124.7

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEE
Q 021960           31 GKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDIL  110 (305)
Q Consensus        31 ~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~l  110 (305)
                      +|++|||||+|+||++++++|+++|++|++++|+...        .  +  ++.+|++|.++++++++..     ++|+|
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~--------~--~--~~~~Dl~d~~~~~~~~~~~-----~~d~v   64 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR--------P--K--FEQVNLLDSNAVHHIIHDF-----QPHVI   64 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC------------------------------CHHHHHHH-----CCSEE
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC--------C--C--eEEecCCCHHHHHHHHHhh-----CCCEE
Confidence            5789999999999999999999999999999886432        1  1  5789999999988888754     69999


Q ss_pred             EEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccC----------CCCCc
Q 021960          111 YNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMG----------GLGPH  180 (305)
Q Consensus       111 i~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~----------~~~~~  180 (305)
                      |||||....        +.+.+++++.+++|+.++.++++++.+.    + ++||++||.+.+.+          .....
T Consensus        65 ih~A~~~~~--------~~~~~~~~~~~~~n~~~~~~l~~a~~~~----~-~~~v~~SS~~v~~~~~~~~~E~~~~~~~~  131 (315)
T 2ydy_A           65 VHCAAERRP--------DVVENQPDAASQLNVDASGNLAKEAAAV----G-AFLIYISSDYVFDGTNPPYREEDIPAPLN  131 (315)
T ss_dssp             EECC---------------------------CHHHHHHHHHHHHH----T-CEEEEEEEGGGSCSSSCSBCTTSCCCCCS
T ss_pred             EECCcccCh--------hhhhcCHHHHHHHHHHHHHHHHHHHHHc----C-CeEEEEchHHHcCCCCCCCCCCCCCCCcC
Confidence            999996432        1245678889999999999999988762    3 49999999886544          23457


Q ss_pred             cchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccch---hcccCCCCCchhhhhhccCCCcHHHHHHHH-H--HH
Q 021960          181 AYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLV---NAWRNSGDGEEEDECMNFGIPSQKEVRKME-E--FV  254 (305)
Q Consensus       181 ~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~  254 (305)
                      .|+.+|++.+.+++.++.+       +..|.|+.+..+...   ..+..                   ...... .  ..
T Consensus       132 ~Y~~sK~~~e~~~~~~~~~-------~~~lR~~~v~G~~~~~~~~~~~~-------------------~~~~~~~~~~~~  185 (315)
T 2ydy_A          132 LYGKTKLDGEKAVLENNLG-------AAVLRIPILYGEVEKLEESAVTV-------------------MFDKVQFSNKSA  185 (315)
T ss_dssp             HHHHHHHHHHHHHHHHCTT-------CEEEEECSEECSCSSGGGSTTGG-------------------GHHHHHCCSSCE
T ss_pred             HHHHHHHHHHHHHHHhCCC-------eEEEeeeeeeCCCCcccccHHHH-------------------HHHHHHhcCCCe
Confidence            8999999999999887533       244555555433211   00000                   000000 0  00


Q ss_pred             hhcCCCCCCCCCHHHHHHHHHHhccCC-CCceeccEEEecCCccc
Q 021960          255 SGLGNLKGTTLRSKDIAEAALYLASDE-SRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       255 ~~~~~~~~~~~~~~dva~~v~~l~s~~-~~~~tG~~i~idgG~~~  298 (305)
                      ...+.....++.++|+|+++++++++. .....|+++++.+|...
T Consensus       186 ~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~i~~~~~~  230 (315)
T 2ydy_A          186 NMDHWQQRFPTHVKDVATVCRQLAEKRMLDPSIKGTFHWSGNEQM  230 (315)
T ss_dssp             EEECSSBBCCEEHHHHHHHHHHHHHHHHTCTTCCEEEECCCSCCB
T ss_pred             eeccCceECcEEHHHHHHHHHHHHHhhccccCCCCeEEEcCCCcc
Confidence            001234456789999999999998753 12246899999988644

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.85  E-value=1.2e-21  Score=176.73  Aligned_cols=167  Identities=20%  Similarity=0.187  Sum_probs=121.1

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhh---HhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 021960           31 GKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSV---LASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRL  107 (305)
Q Consensus        31 ~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~---~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~i  107 (305)
                      +|++|||||+|+||+++++.|+++|++|+++.|+......   +.......++.++.+|++|.++++++++       .+
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   81 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQELGDLKIFRADLTDELSFEAPIA-------GC   81 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHGGGSCEEEEECCTTTSSSSHHHHT-------TC
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcCCCCcEEEEecCCCChHHHHHHHc-------CC
Confidence            6899999999999999999999999999988776442211   1111112358889999999888877664       58


Q ss_pred             cEEEEcCCCCCCCCCCCcccCCCHHH-HHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCC----------
Q 021960          108 DILYNNAGVLGNQRKHKSIIDFDADE-FDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGG----------  176 (305)
Q Consensus       108 d~li~nag~~~~~~~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~----------  176 (305)
                      |+|||+|+....          ..++ .++.+++|+.++.++++++.+..   +.++||++||.++..+.          
T Consensus        82 D~Vih~A~~~~~----------~~~~~~~~~~~~nv~gt~~ll~aa~~~~---~v~r~V~~SS~~~~~~~~~~~~~~~~~  148 (338)
T 2rh8_A           82 DFVFHVATPVHF----------ASEDPENDMIKPAIQGVVNVMKACTRAK---SVKRVILTSSAAAVTINQLDGTGLVVD  148 (338)
T ss_dssp             SEEEEESSCCCC-------------------CHHHHHHHHHHHHHHHHCT---TCCEEEEECCHHHHHHHHHTCSCCCCC
T ss_pred             CEEEEeCCccCC----------CCCCcHHHHHHHHHHHHHHHHHHHHHcC---CcCEEEEEecHHHeecCCcCCCCcccC
Confidence            999999985311          1122 24588999999999998876521   25799999997743210          


Q ss_pred             -----------C---CCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccc
Q 021960          177 -----------L---GPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSML  220 (305)
Q Consensus       177 -----------~---~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~  220 (305)
                                 +   ....|+.+|.+.+.+++.++.+   .|+++++++||.+.++..
T Consensus       149 E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gi~~~~lrp~~v~Gp~~  203 (338)
T 2rh8_A          149 EKNWTDIEFLTSAKPPTWGYPASKTLAEKAAWKFAEE---NNIDLITVIPTLMAGSSL  203 (338)
T ss_dssp             TTTTTCC-------CCCCCCTTSCCHHHHHHHHHHHH---HTCCEEEEEECEEESCCS
T ss_pred             hhhccchhhccccCCccchHHHHHHHHHHHHHHHHHH---cCCcEEEEeCCceECCCC
Confidence                       0   0125999999999998887765   489999999999999863

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.85  E-value=2.7e-20  Score=157.96  Aligned_cols=199  Identities=13%  Similarity=0.039  Sum_probs=140.6

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEEEE
Q 021960           33 VAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILYN  112 (305)
Q Consensus        33 ~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~li~  112 (305)
                      ++|||||+|+||+++++.|+++|++|++++|+......+    ....+.++.+|++|.++         +.++.+|+|||
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~----~~~~~~~~~~D~~d~~~---------~~~~~~d~vi~   68 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADR----LGATVATLVKEPLVLTE---------ADLDSVDAVVD   68 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH----TCTTSEEEECCGGGCCH---------HHHTTCSEEEE
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccc----cCCCceEEecccccccH---------hhcccCCEEEE
Confidence            599999999999999999999999999999987654432    23458999999999876         12257999999


Q ss_pred             cCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCC--------------
Q 021960          113 NAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLG--------------  178 (305)
Q Consensus       113 nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~--------------  178 (305)
                      |||....    ..    .       ..+|+.++    +.+++.+.+.+ +++|++||.++..+.+.              
T Consensus        69 ~ag~~~~----~~----~-------~~~n~~~~----~~l~~a~~~~~-~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~  128 (224)
T 3h2s_A           69 ALSVPWG----SG----R-------GYLHLDFA----THLVSLLRNSD-TLAVFILGSASLAMPGADHPMILDFPESAAS  128 (224)
T ss_dssp             CCCCCTT----SS----C-------THHHHHHH----HHHHHTCTTCC-CEEEEECCGGGSBCTTCSSCGGGGCCGGGGG
T ss_pred             CCccCCC----cc----h-------hhHHHHHH----HHHHHHHHHcC-CcEEEEecceeeccCCCCccccccCCCCCcc
Confidence            9997521    00    0       24566664    55556666666 99999999877654433              


Q ss_pred             CccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcC
Q 021960          179 PHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLG  258 (305)
Q Consensus       179 ~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (305)
                      ...|+.+|++.+.+ +.   .....+++++.|+||.+.++.....+..        ....  ++              ..
T Consensus       129 ~~~y~~sK~~~e~~-~~---~~~~~~i~~~ivrp~~v~g~~~~~~~~~--------~~~~--~~--------------~~  180 (224)
T 3h2s_A          129 QPWYDGALYQYYEY-QF---LQMNANVNWIGISPSEAFPSGPATSYVA--------GKDT--LL--------------VG  180 (224)
T ss_dssp             STTHHHHHHHHHHH-HH---HTTCTTSCEEEEEECSBCCCCCCCCEEE--------ESSB--CC--------------CC
T ss_pred             chhhHHHHHHHHHH-HH---HHhcCCCcEEEEcCccccCCCcccCcee--------cccc--cc--------------cC
Confidence            57899999998854 22   2235789999999999988732110000        0000  00              01


Q ss_pred             CCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecC
Q 021960          259 NLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDG  294 (305)
Q Consensus       259 ~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idg  294 (305)
                      .....++.++|+|+++++++.++.  ..|++|.+.|
T Consensus       181 ~~~~~~i~~~DvA~~~~~~l~~~~--~~g~~~~~~~  214 (224)
T 3h2s_A          181 EDGQSHITTGNMALAILDQLEHPT--AIRDRIVVRD  214 (224)
T ss_dssp             TTSCCBCCHHHHHHHHHHHHHSCC--CTTSEEEEEE
T ss_pred             CCCCceEeHHHHHHHHHHHhcCcc--ccCCEEEEec
Confidence            223467899999999999998753  4688888765

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=99.84  E-value=3.2e-20  Score=165.28  Aligned_cols=221  Identities=14%  Similarity=0.122  Sum_probs=155.7

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHc--CCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 021960           31 GKVAIITGGARGIGEAAVRLFARH--GAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLD  108 (305)
Q Consensus        31 ~k~vlVtGas~giG~~ia~~l~~~--g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id  108 (305)
                      ++++|||||+|+||++++++|+++  |++|++++|+.......      .++.++.+|++|.+++++++++.     .+|
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~------~~~~~~~~D~~d~~~~~~~~~~~-----~~d   70 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTDVV------NSGPFEVVNALDFNQIEHLVEVH-----KIT   70 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCHHH------HSSCEEECCTTCHHHHHHHHHHT-----TCC
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccccc------CCCceEEecCCCHHHHHHHHhhc-----CCC
Confidence            468999999999999999999999  89999999876543211      13678899999999998887653     699


Q ss_pred             EEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCC------------
Q 021960          109 ILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGG------------  176 (305)
Q Consensus       109 ~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~------------  176 (305)
                      +|||+||....         ...+++++.+++|+.++.++++++.+    .+.++||++||.+.+.+.            
T Consensus        71 ~vih~a~~~~~---------~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~  137 (312)
T 2yy7_A           71 DIYLMAALLSA---------TAEKNPAFAWDLNMNSLFHVLNLAKA----KKIKKIFWPSSIAVFGPTTPKENTPQYTIM  137 (312)
T ss_dssp             EEEECCCCCHH---------HHHHCHHHHHHHHHHHHHHHHHHHHT----TSCSEEECCEEGGGCCTTSCSSSBCSSCBC
T ss_pred             EEEECCccCCC---------chhhChHHHHHHHHHHHHHHHHHHHH----cCCCEEEEeccHHHhCCCCCCCCccccCcC
Confidence            99999996421         12356778899999999888887654    455799999998765431            


Q ss_pred             CCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHh-
Q 021960          177 LGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVS-  255 (305)
Q Consensus       177 ~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  255 (305)
                      .....|+.+|.+.+.+++.++.++   +++++.++||.+..+....   .  ..           ........+..... 
T Consensus       138 ~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~g~~~~~---~--~~-----------~~~~~~~~~~~~~~~  198 (312)
T 2yy7_A          138 EPSTVYGISKQAGERWCEYYHNIY---GVDVRSIRYPGLISWSTPP---G--GG-----------TTDYAVDIFYKAIAD  198 (312)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHHH---CCEEECEEECEEECSSSCC---C--SC-----------TTTHHHHHHHHHHHT
T ss_pred             CCCchhHHHHHHHHHHHHHHHHhc---CCcEEEEeCCeEecCCCCC---C--Cc-----------hhhhHHHHHHHHHcC
Confidence            225689999999999999988775   7999999999987753110   0  00           00001111111111 


Q ss_pred             h----c--CCCCCCCCCHHHHHHHHHHhccCCCCcee-ccEEEecC
Q 021960          256 G----L--GNLKGTTLRSKDIAEAALYLASDESRYVS-GHNLVVDG  294 (305)
Q Consensus       256 ~----~--~~~~~~~~~~~dva~~v~~l~s~~~~~~t-G~~i~idg  294 (305)
                      .    +  +.....++.++|+|++++.++........ |+++++.|
T Consensus       199 ~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~ni~~  244 (312)
T 2yy7_A          199 KKYECFLSSETKMPMMYMDDAIDATINIMKAPVEKIKIHSSYNLAA  244 (312)
T ss_dssp             SEEEESSCTTCCEEEEEHHHHHHHHHHHHHSCGGGCCCSSCEECCS
T ss_pred             CCeEEecCCCceeeeeeHHHHHHHHHHHHhCcccccccCceEEeCC
Confidence            0    0  11123356789999999999876533232 58888865

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.84  E-value=6.6e-21  Score=168.34  Aligned_cols=201  Identities=14%  Similarity=0.113  Sum_probs=146.8

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDI  109 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~  109 (305)
                      ..+++|||||+|+||+++++.|+++|++|++++|+                   .+|++|.++++++++..     ++|+
T Consensus        11 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~-------------------~~Dl~d~~~~~~~~~~~-----~~d~   66 (292)
T 1vl0_A           11 HHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ-------------------DLDITNVLAVNKFFNEK-----KPNV   66 (292)
T ss_dssp             -CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT-------------------TCCTTCHHHHHHHHHHH-----CCSE
T ss_pred             ccceEEEECCCChHHHHHHHHHHhCCCeEEeccCc-------------------cCCCCCHHHHHHHHHhc-----CCCE
Confidence            35799999999999999999999999999999886                   26999999998888755     6999


Q ss_pred             EEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCC-----------C
Q 021960          110 LYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGL-----------G  178 (305)
Q Consensus       110 li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~-----------~  178 (305)
                      |||+||....        +.+.+++++.+++|+.++.++++++.+    .+. +||++||.+.+.+..           .
T Consensus        67 vih~A~~~~~--------~~~~~~~~~~~~~nv~~~~~l~~a~~~----~~~-~iv~~SS~~v~~~~~~~~~~E~~~~~~  133 (292)
T 1vl0_A           67 VINCAAHTAV--------DKCEEQYDLAYKINAIGPKNLAAAAYS----VGA-EIVQISTDYVFDGEAKEPITEFDEVNP  133 (292)
T ss_dssp             EEECCCCCCH--------HHHHHCHHHHHHHHTHHHHHHHHHHHH----HTC-EEEEEEEGGGSCSCCSSCBCTTSCCCC
T ss_pred             EEECCccCCH--------HHHhcCHHHHHHHHHHHHHHHHHHHHH----cCC-eEEEechHHeECCCCCCCCCCCCCCCC
Confidence            9999996421        123467888999999999999998866    233 999999986654322           3


Q ss_pred             CccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHH--HHhh
Q 021960          179 PHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEE--FVSG  256 (305)
Q Consensus       179 ~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~  256 (305)
                      ...|+.+|.+.+.+++.++.       .+..+.|+.+..+ ....+                   .........  ....
T Consensus       134 ~~~Y~~sK~~~E~~~~~~~~-------~~~~lR~~~v~G~-~~~~~-------------------~~~~~~~~~~~~~~~  186 (292)
T 1vl0_A          134 QSAYGKTKLEGENFVKALNP-------KYYIVRTAWLYGD-GNNFV-------------------KTMINLGKTHDELKV  186 (292)
T ss_dssp             CSHHHHHHHHHHHHHHHHCS-------SEEEEEECSEESS-SSCHH-------------------HHHHHHHHHCSEEEE
T ss_pred             ccHHHHHHHHHHHHHHhhCC-------CeEEEeeeeeeCC-CcChH-------------------HHHHHHHhcCCcEEe
Confidence            56899999999999987653       3677888888654 11100                   011111110  0001


Q ss_pred             cCCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          257 LGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       257 ~~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      .+.....++.++|+|+++++++++.    +|+++++++|...
T Consensus       187 ~~~~~~~~i~v~Dva~~~~~~~~~~----~~~~~~i~~~~~~  224 (292)
T 1vl0_A          187 VHDQVGTPTSTVDLARVVLKVIDEK----NYGTFHCTCKGIC  224 (292)
T ss_dssp             ESSCEECCEEHHHHHHHHHHHHHHT----CCEEEECCCBSCE
T ss_pred             ecCeeeCCccHHHHHHHHHHHHhcC----CCcEEEecCCCCc
Confidence            1123355678999999999999875    6899999988543

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=99.84  E-value=6.2e-20  Score=163.70  Aligned_cols=211  Identities=17%  Similarity=0.106  Sum_probs=153.0

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEE
Q 021960           31 GKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDIL  110 (305)
Q Consensus        31 ~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~l  110 (305)
                      ++++|||||+|+||+++++.|+++|++|++++|+..... +.      ++.++.+|++ .+++.++++       ++|+|
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~------~~~~~~~Dl~-~~~~~~~~~-------~~d~V   66 (311)
T 3m2p_A            2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA-IN------DYEYRVSDYT-LEDLINQLN-------DVDAV   66 (311)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC------------CCEEEECCCC-HHHHHHHTT-------TCSEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc-CC------ceEEEEcccc-HHHHHHhhc-------CCCEE
Confidence            368999999999999999999999999999999843322 21      4889999999 888887765       69999


Q ss_pred             EEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCC-----------CCC
Q 021960          111 YNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGG-----------LGP  179 (305)
Q Consensus       111 i~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~-----------~~~  179 (305)
                      ||+||.....            +.++.+++|+.++.++++++..    .+..+||++||.+.+-..           ...
T Consensus        67 ih~a~~~~~~------------~~~~~~~~n~~~~~~ll~a~~~----~~~~r~v~~SS~~vyg~~~~~~~~E~~~~~p~  130 (311)
T 3m2p_A           67 VHLAATRGSQ------------GKISEFHDNEILTQNLYDACYE----NNISNIVYASTISAYSDETSLPWNEKELPLPD  130 (311)
T ss_dssp             EECCCCCCSS------------SCGGGTHHHHHHHHHHHHHHHH----TTCCEEEEEEEGGGCCCGGGCSBCTTSCCCCS
T ss_pred             EEccccCCCC------------ChHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEccHHHhCCCCCCCCCCCCCCCCC
Confidence            9999975331            3345678999998887777644    456789999996654221           134


Q ss_pred             ccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhc--
Q 021960          180 HAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGL--  257 (305)
Q Consensus       180 ~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  257 (305)
                      ..|+.+|.+.+.+++.++.+   .+++++.+.|+.+..+.....  .                  .....+.......  
T Consensus       131 ~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~~~~~--~------------------~~~~~~~~~~~~~~~  187 (311)
T 3m2p_A          131 LMYGVSKLACEHIGNIYSRK---KGLCIKNLRFAHLYGFNEKNN--Y------------------MINRFFRQAFHGEQL  187 (311)
T ss_dssp             SHHHHHHHHHHHHHHHHHHH---SCCEEEEEEECEEECSCC--C--C------------------HHHHHHHHHHTCCCE
T ss_pred             chhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCceeCcCCCCC--C------------------HHHHHHHHHHcCCCe
Confidence            68999999999999998876   589999999999987653210  0                  0000111111110  


Q ss_pred             -----CCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          258 -----GNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       258 -----~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                           +.....++.++|+|++++.+++...   .|+++++.+|...
T Consensus       188 ~~~g~~~~~~~~v~v~Dva~a~~~~~~~~~---~~~~~~i~~~~~~  230 (311)
T 3m2p_A          188 TLHANSVAKREFLYAKDAAKSVIYALKQEK---VSGTFNIGSGDAL  230 (311)
T ss_dssp             EESSBCCCCEEEEEHHHHHHHHHHHTTCTT---CCEEEEECCSCEE
T ss_pred             EEecCCCeEEceEEHHHHHHHHHHHHhcCC---CCCeEEeCCCCcc
Confidence                 1122346789999999999998764   7899999888644

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.84  E-value=4.6e-22  Score=167.79  Aligned_cols=201  Identities=12%  Similarity=-0.008  Sum_probs=145.1

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCC--eEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGA--KVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRL  107 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~--~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~i  107 (305)
                      .++++|||||+|+||+++++.|+++|+  +|++++|+...        ...++.++.+|++|.+++++++         +
T Consensus         4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~--------~~~~~~~~~~D~~~~~~~~~~~---------~   66 (215)
T 2a35_A            4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA--------EHPRLDNPVGPLAELLPQLDGS---------I   66 (215)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC--------CCTTEECCBSCHHHHGGGCCSC---------C
T ss_pred             CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc--------cCCCceEEeccccCHHHHHHhh---------h
Confidence            467999999999999999999999998  99999987654        1235788889998876665443         8


Q ss_pred             cEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhHH
Q 021960          108 DILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKH  187 (305)
Q Consensus       108 d~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKa  187 (305)
                      |+||||||....          +.+++++.+++|+.++..+++.+.+    .+.++||++||.....+  ....|+.+|+
T Consensus        67 d~vi~~a~~~~~----------~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~~~~--~~~~y~~sK~  130 (215)
T 2a35_A           67 DTAFCCLGTTIK----------EAGSEEAFRAVDFDLPLAVGKRALE----MGARHYLVVSALGADAK--SSIFYNRVKG  130 (215)
T ss_dssp             SEEEECCCCCHH----------HHSSHHHHHHHHTHHHHHHHHHHHH----TTCCEEEEECCTTCCTT--CSSHHHHHHH
T ss_pred             cEEEECeeeccc----------cCCCHHHHHHhhHHHHHHHHHHHHH----cCCCEEEEECCcccCCC--CccHHHHHHH
Confidence            999999996421          2345677889999999888887654    45678999999877643  4568999999


Q ss_pred             HHHHHHHHHHHHHCcCCcE-EEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCC
Q 021960          188 AIVGLTKNAACELGRYGIR-VNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLR  266 (305)
Q Consensus       188 a~~~~~~~la~e~~~~~i~-v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (305)
                      +++.+++.       .+++ ++.++||.+.++.....+...        ......+...              ....++.
T Consensus       131 ~~e~~~~~-------~~~~~~~~vrp~~v~g~~~~~~~~~~--------~~~~~~~~~~--------------~~~~~i~  181 (215)
T 2a35_A          131 ELEQALQE-------QGWPQLTIARPSLLFGPREEFRLAEI--------LAAPIARILP--------------GKYHGIE  181 (215)
T ss_dssp             HHHHHHTT-------SCCSEEEEEECCSEESTTSCEEGGGG--------TTCCCC------------------CHHHHHH
T ss_pred             HHHHHHHH-------cCCCeEEEEeCceeeCCCCcchHHHH--------HHHhhhhccC--------------CCcCcEe
Confidence            99988764       3798 999999999987532111100        0000000000              0112346


Q ss_pred             HHHHHHHHHHhccCCCCceeccEEEecCCc
Q 021960          267 SKDIAEAALYLASDESRYVSGHNLVVDGGV  296 (305)
Q Consensus       267 ~~dva~~v~~l~s~~~~~~tG~~i~idgG~  296 (305)
                      ++|+|+.++.++.+..    +.++++.++.
T Consensus       182 ~~Dva~~~~~~~~~~~----~~~~~i~~~~  207 (215)
T 2a35_A          182 ACDLARALWRLALEEG----KGVRFVESDE  207 (215)
T ss_dssp             HHHHHHHHHHHHTCCC----SEEEEEEHHH
T ss_pred             HHHHHHHHHHHHhcCC----CCceEEcHHH
Confidence            8999999999998763    7778877664

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.84  E-value=6.1e-20  Score=155.27  Aligned_cols=205  Identities=11%  Similarity=0.072  Sum_probs=134.4

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEEEE
Q 021960           33 VAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILYN  112 (305)
Q Consensus        33 ~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~li~  112 (305)
                      ++|||||+|+||+++++.|+++|++|++++|+......+.     ..+.++.+|++|.++  +       .+..+|+|||
T Consensus         2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-----~~~~~~~~D~~d~~~--~-------~~~~~d~vi~   67 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH-----KDINILQKDIFDLTL--S-------DLSDQNVVVD   67 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC-----SSSEEEECCGGGCCH--H-------HHTTCSEEEE
T ss_pred             eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc-----CCCeEEeccccChhh--h-------hhcCCCEEEE
Confidence            6899999999999999999999999999999876544332     458899999999876  2       2247999999


Q ss_pred             cCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCC------------CCc
Q 021960          113 NAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGL------------GPH  180 (305)
Q Consensus       113 nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~------------~~~  180 (305)
                      |||....                 ....|+.+    ++.+++.+.+.+.+++|++||..+..+.+            ...
T Consensus        68 ~ag~~~~-----------------~~~~~~~~----~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~  126 (221)
T 3ew7_A           68 AYGISPD-----------------EAEKHVTS----LDHLISVLNGTVSPRLLVVGGAASLQIDEDGNTLLESKGLREAP  126 (221)
T ss_dssp             CCCSSTT-----------------TTTSHHHH----HHHHHHHHCSCCSSEEEEECCCC-------------------CC
T ss_pred             CCcCCcc-----------------ccchHHHH----HHHHHHHHHhcCCceEEEEecceEEEcCCCCccccccCCCCCHH
Confidence            9997421                 02234544    45566666667778999999988765433            245


Q ss_pred             cchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchh-cccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCC
Q 021960          181 AYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVN-AWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGN  259 (305)
Q Consensus       181 ~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (305)
                      .|+.+|.+.+.+ +.+..  ...+++++.|+||.+.++.... .+..               . .+   .+.    . ..
T Consensus       127 ~y~~~k~~~e~~-~~~~~--~~~gi~~~ivrp~~v~g~~~~~~~~~~---------------~-~~---~~~----~-~~  179 (221)
T 3ew7_A          127 YYPTARAQAKQL-EHLKS--HQAEFSWTYISPSAMFEPGERTGDYQI---------------G-KD---HLL----F-GS  179 (221)
T ss_dssp             CSCCHHHHHHHH-HHHHT--TTTTSCEEEEECSSCCCCC-----------------------------------------
T ss_pred             HHHHHHHHHHHH-HHHHh--hccCccEEEEeCcceecCCCccCceEe---------------c-cc---cce----e-cC
Confidence            699999999887 33332  1468999999999998872110 0000               0 00   000    0 01


Q ss_pred             CCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCcccccc
Q 021960          260 LKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTSRN  301 (305)
Q Consensus       260 ~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~~~  301 (305)
                      ....+++++|+|++++.++.+..  ..|+.+++-|-...+.+
T Consensus       180 ~~~~~i~~~Dva~~~~~~l~~~~--~~g~~~~~~~~~~~~~~  219 (221)
T 3ew7_A          180 DGNSFISMEDYAIAVLDEIERPN--HLNEHFTVAGKLEHHHH  219 (221)
T ss_dssp             ----CCCHHHHHHHHHHHHHSCS--CTTSEEECCC-------
T ss_pred             CCCceEeHHHHHHHHHHHHhCcc--ccCCEEEECCCCccccc
Confidence            11347789999999999998763  46999999887665543

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.84  E-value=9.8e-20  Score=164.13  Aligned_cols=166  Identities=17%  Similarity=0.139  Sum_probs=124.5

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEEecCcch----hhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 021960           33 VAIITGGARGIGEAAVRLFARHGAKVVIADVEDTL----GSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLD  108 (305)
Q Consensus        33 ~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~----~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id  108 (305)
                      ++|||||+|+||++++++|+++|++|++++|....    ...+.. ..+.++.++.+|++|.++++++++..     ++|
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~D   75 (338)
T 1udb_A            2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIER-LGGKHPTFVEGDIRNEALMTEILHDH-----AID   75 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHH-HHTSCCEEEECCTTCHHHHHHHHHHT-----TCS
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHh-hcCCcceEEEccCCCHHHHHHHhhcc-----CCC
Confidence            68999999999999999999999999998764321    111111 11345788999999999988877642     599


Q ss_pred             EEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEeccccccc-----------CC-
Q 021960          109 ILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVM-----------GG-  176 (305)
Q Consensus       109 ~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~-----------~~-  176 (305)
                      +||||||.....        ...++.++.+++|+.++.++++.+.    +.+.++||++||.+.+-           +. 
T Consensus        76 ~vih~A~~~~~~--------~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~  143 (338)
T 1udb_A           76 TVIHFAGLKAVG--------ESVQKPLEYYDNNVNGTLRLISAMR----AANVKNFIFSSSATVYGDNPKIPYVESFPTG  143 (338)
T ss_dssp             EEEECCSCCCHH--------HHHHCHHHHHHHHHHHHHHHHHHHH----HHTCCEEEEEEEGGGGCSCCSSSBCTTSCCC
T ss_pred             EEEECCccCccc--------cchhcHHHHHHHHHHHHHHHHHHHH----hcCCCeEEEEccHHHhCCCCCCCcCcccCCC
Confidence            999999964210        1234566789999999988887653    34567999999976542           11 


Q ss_pred             CCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccc
Q 021960          177 LGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATS  218 (305)
Q Consensus       177 ~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~  218 (305)
                      +....|+.+|++.+.+++.++.+.  .++++..+.|+.+..+
T Consensus       144 ~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~  183 (338)
T 1udb_A          144 TPQSPYGKSKLMVEQILTDLQKAQ--PDWSIALLRYFNPVGA  183 (338)
T ss_dssp             CCSSHHHHHHHHHHHHHHHHHHHS--TTCEEEEEEECEEECC
T ss_pred             CCCChHHHHHHHHHHHHHHHHHhc--CCCceEEEeeceecCC
Confidence            236789999999999999999873  3789999998766544

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.83  E-value=6.6e-20  Score=179.85  Aligned_cols=230  Identities=16%  Similarity=0.119  Sum_probs=159.8

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHc-CCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHH-HHHHHHHHHHhcCC
Q 021960           29 LEGKVAIITGGARGIGEAAVRLFARH-GAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEED-IENLINSTVSRYGR  106 (305)
Q Consensus        29 l~~k~vlVtGas~giG~~ia~~l~~~-g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~-i~~~~~~~~~~~g~  106 (305)
                      ++++++|||||+|+||++++++|+++ |++|++++|+......+   ....++.++.+|++|.++ ++++++       .
T Consensus       313 ~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~---~~~~~v~~v~~Dl~d~~~~~~~~~~-------~  382 (660)
T 1z7e_A          313 RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRF---LNHPHFHFVEGDISIHSEWIEYHVK-------K  382 (660)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGG---TTCTTEEEEECCTTTCHHHHHHHHH-------H
T ss_pred             ccCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhh---ccCCceEEEECCCCCcHHHHHHhhc-------C
Confidence            46789999999999999999999998 89999999976543322   223468899999998654 555554       4


Q ss_pred             ccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCC----------
Q 021960          107 LDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGG----------  176 (305)
Q Consensus       107 id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~----------  176 (305)
                      +|+|||+||.....        ...+++++.+++|+.++.++++++..    .+ ++||++||.+.+.+.          
T Consensus       383 ~D~Vih~Aa~~~~~--------~~~~~~~~~~~~Nv~gt~~ll~aa~~----~~-~r~V~~SS~~vyg~~~~~~~~E~~~  449 (660)
T 1z7e_A          383 CDVVLPLVAIATPI--------EYTRNPLRVFELDFEENLRIIRYCVK----YR-KRIIFPSTSEVYGMCSDKYFDEDHS  449 (660)
T ss_dssp             CSEEEECCCCCCTH--------HHHHSHHHHHHHHTHHHHHHHHHHHH----TT-CEEEEECCGGGGBTCCSSSBCTTTC
T ss_pred             CCEEEECceecCcc--------ccccCHHHHHHhhhHHHHHHHHHHHH----hC-CEEEEEecHHHcCCCCCcccCCCcc
Confidence            89999999964320        12345678899999999888887754    34 799999997665321          


Q ss_pred             --------CCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHH
Q 021960          177 --------LGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVR  248 (305)
Q Consensus       177 --------~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (305)
                              .....|+.+|.+.+.+++.++.+.   +++++.++||.+.++........           ..+.. .....
T Consensus       450 ~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilRpg~v~Gp~~~~~~~~-----------~~~~~-~~~~~  514 (660)
T 1z7e_A          450 NLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGPRLDNLNAA-----------RIGSS-RAITQ  514 (660)
T ss_dssp             CEEECCTTCTTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEESTTSSCHHHH-----------TTTCS-CHHHH
T ss_pred             ccccCcccCCCCCcHHHHHHHHHHHHHHHHHc---CCCEEEECCCcccCCCccccccc-----------ccccc-chHHH
Confidence                    112369999999999999998774   79999999999988753210000           00000 00001


Q ss_pred             HHHHHHhhc-------CCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCc
Q 021960          249 KMEEFVSGL-------GNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGV  296 (305)
Q Consensus       249 ~~~~~~~~~-------~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~  296 (305)
                      .+.......       +.....++.++|+|++++++++......+|+++++++|.
T Consensus       515 ~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~~~~g~~~ni~~~~  569 (660)
T 1z7e_A          515 LILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPE  569 (660)
T ss_dssp             HHHHHHHTCCEEEEGGGCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCGG
T ss_pred             HHHHHHcCCCcEEeCCCCeEEEEEEHHHHHHHHHHHHhCccccCCCeEEEECCCC
Confidence            111111110       112234678999999999999875444679999999884

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=99.83  E-value=1.4e-19  Score=163.53  Aligned_cols=225  Identities=15%  Similarity=0.086  Sum_probs=150.8

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhh-hHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcC
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGS-VLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYG  105 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~-~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g  105 (305)
                      +.++++++|||||+|+||+++++.|+++|++|++++|+..... .........++.++.+|+.|..            +.
T Consensus        23 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~   90 (343)
T 2b69_A           23 MEKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPL------------YI   90 (343)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSCC------------CC
T ss_pred             cccCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhhccCCceEEEeCccCChh------------hc
Confidence            4567899999999999999999999999999999988643221 1222222356889999998741            35


Q ss_pred             CccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEeccccccc-----------
Q 021960          106 RLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVM-----------  174 (305)
Q Consensus       106 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~-----------  174 (305)
                      .+|+|||+||.....     ..   .+++++.+++|+.++.++++++.+.    + .++|++||.+.+-           
T Consensus        91 ~~d~vih~A~~~~~~-----~~---~~~~~~~~~~n~~~~~~l~~a~~~~----~-~~~v~~SS~~v~g~~~~~~~~E~~  157 (343)
T 2b69_A           91 EVDQIYHLASPASPP-----NY---MYNPIKTLKTNTIGTLNMLGLAKRV----G-ARLLLASTSEVYGDPEVHPQSEDY  157 (343)
T ss_dssp             CCSEEEECCSCCSHH-----HH---TTCHHHHHHHHHHHHHHHHHHHHHH----T-CEEEEEEEGGGGBSCSSSSBCTTC
T ss_pred             CCCEEEECccccCch-----hh---hhCHHHHHHHHHHHHHHHHHHHHHh----C-CcEEEECcHHHhCCCCCCCCcccc
Confidence            799999999964211     01   1235677899999999988887652    3 4899999976542           


Q ss_pred             -----CCCCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHH
Q 021960          175 -----GGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRK  249 (305)
Q Consensus       175 -----~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (305)
                           +......|+.+|++.+.+++.++.+.   +++++.++||.+.++.....     .. .         .....+..
T Consensus       158 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilrp~~v~G~~~~~~-----~~-~---------~~~~~~~~  219 (343)
T 2b69_A          158 WGHVNPIGPRACYDEGKRVAETMCYAYMKQE---GVEVRVARIFNTFGPRMHMN-----DG-R---------VVSNFILQ  219 (343)
T ss_dssp             CCBCCSSSTTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTCCTT-----CC-C---------HHHHHHHH
T ss_pred             cccCCCCCCCCchHHHHHHHHHHHHHHHHHh---CCcEEEEEEcceeCcCCCCC-----cc-c---------HHHHHHHH
Confidence                 22234679999999999999988774   79999999999988752110     00 0         00011111


Q ss_pred             HHHHHh--hc--CCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          250 MEEFVS--GL--GNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       250 ~~~~~~--~~--~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      ...-..  .+  +.....++.++|+|++++.++...    .++++++.+|...
T Consensus       220 ~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~----~~~~~~i~~~~~~  268 (343)
T 2b69_A          220 ALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSN----VSSPVNLGNPEEH  268 (343)
T ss_dssp             HHHTCCEEEESSSCCEEECEEHHHHHHHHHHHHTSS----CCSCEEESCCCEE
T ss_pred             HHcCCCceEcCCCCeEEeeEeHHHHHHHHHHHHhcC----CCCeEEecCCCCC
Confidence            111000  00  112234678999999999998764    2678888887543

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=99.83  E-value=6.6e-20  Score=163.98  Aligned_cols=218  Identities=16%  Similarity=0.125  Sum_probs=151.6

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDI  109 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~  109 (305)
                      .++++|||||+|+||++++++|+++|++|+++.|+.                  .+|++|.++++++++..     .+|+
T Consensus         2 ~~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~------------------~~D~~d~~~~~~~~~~~-----~~d~   58 (321)
T 1e6u_A            2 AKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD------------------ELNLLDSRAVHDFFASE-----RIDQ   58 (321)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT------------------TCCTTCHHHHHHHHHHH-----CCSE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc------------------cCCccCHHHHHHHHHhc-----CCCE
Confidence            467899999999999999999999999999887652                  26999999998887754     6999


Q ss_pred             EEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccC--------------
Q 021960          110 LYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMG--------------  175 (305)
Q Consensus       110 li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~--------------  175 (305)
                      |||+||....       .....++.++.+++|+.++.++++++.+    .+..+||++||...+-+              
T Consensus        59 vih~a~~~~~-------~~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~  127 (321)
T 1e6u_A           59 VYLAAAKVGG-------IVANNTYPADFIYQNMMIESNIIHAAHQ----NDVNKLLFLGSSCIYPKLAKQPMAESELLQG  127 (321)
T ss_dssp             EEECCCCCCC-------HHHHHHCHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEECCGGGSCTTCCSSBCGGGTTSS
T ss_pred             EEEcCeecCC-------cchhhhCHHHHHHHHHHHHHHHHHHHHH----hCCCeEEEEccHHHcCCCCCCCcCccccccC
Confidence            9999996421       1112345678899999999888887754    44569999999876521              


Q ss_pred             --CCCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHH
Q 021960          176 --GLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEF  253 (305)
Q Consensus       176 --~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (305)
                        .+....|+.+|.+.+.+++.++.++   +++++.++||.+..+........   . .         -....+..+...
T Consensus       128 ~~~p~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilrp~~v~G~~~~~~~~~---~-~---------~~~~~~~~~~~~  191 (321)
T 1e6u_A          128 TLEPTNEPYAIAKIAGIKLCESYNRQY---GRDYRSVMPTNLYGPHDNFHPSN---S-H---------VIPALLRRFHEA  191 (321)
T ss_dssp             CCCGGGHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEESTTCCCCTTC---S-S---------HHHHHHHHHHHH
T ss_pred             CCCCCCCccHHHHHHHHHHHHHHHHHh---CCCEEEEEeCCcCCcCCCCCCCC---C-c---------cHHHHHHHHHHh
Confidence              1113589999999999999998774   79999999999988642110000   0 0         000111111110


Q ss_pred             H----hh---c--CCCCCCCCCHHHHHHHHHHhccCCCCc------eeccEEEecCCcc
Q 021960          254 V----SG---L--GNLKGTTLRSKDIAEAALYLASDESRY------VSGHNLVVDGGVT  297 (305)
Q Consensus       254 ~----~~---~--~~~~~~~~~~~dva~~v~~l~s~~~~~------~tG~~i~idgG~~  297 (305)
                      .    ..   +  +.....++.++|+|++++.++......      ..|+++++.+|..
T Consensus       192 ~~~g~~~~~~~~~g~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~  250 (321)
T 1e6u_A          192 TAQKAPDVVVWGSGTPMREFLHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVD  250 (321)
T ss_dssp             HHHTCSEEEEESCSCCEECEEEHHHHHHHHHHHHHSCHHHHHHTSBTTBCCEEESCSCC
T ss_pred             hhcCCCceEEcCCCCEEEEeEEHHHHHHHHHHHHhCcccccccccccCCceEEeCCCCC
Confidence            0    01   1  122234678999999999998764211      1368899877753

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.82  E-value=2.3e-19  Score=160.23  Aligned_cols=217  Identities=17%  Similarity=0.183  Sum_probs=150.2

Q ss_pred             EEEEecCCCchHHHHHHHHHHc--CCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEE
Q 021960           33 VAIITGGARGIGEAAVRLFARH--GAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDIL  110 (305)
Q Consensus        33 ~vlVtGas~giG~~ia~~l~~~--g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~l  110 (305)
                      ++|||||+|+||+++++.|+++  |++|++++|+.....         .+.++.+|++|.+++++++++.     .+|+|
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~---------~~~~~~~D~~d~~~~~~~~~~~-----~~d~v   66 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG---------GIKFITLDVSNRDEIDRAVEKY-----SIDAI   66 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT---------TCCEEECCTTCHHHHHHHHHHT-----TCCEE
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc---------CceEEEecCCCHHHHHHHHhhc-----CCcEE
Confidence            3899999999999999999998  899999988754321         3567899999999998887642     69999


Q ss_pred             EEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCC------------CC
Q 021960          111 YNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGG------------LG  178 (305)
Q Consensus       111 i~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~------------~~  178 (305)
                      ||+||....         ...+++++.+++|+.++.++++++.+    .+.++||++||.+.+.+.            ..
T Consensus        67 ih~a~~~~~---------~~~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~p  133 (317)
T 3ajr_A           67 FHLAGILSA---------KGEKDPALAYKVNMNGTYNILEAAKQ----HRVEKVVIPSTIGVFGPETPKNKVPSITITRP  133 (317)
T ss_dssp             EECCCCCHH---------HHHHCHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEEEEGGGCCTTSCSSSBCSSSCCCC
T ss_pred             EECCcccCC---------ccccChHHHhhhhhHHHHHHHHHHHH----cCCCEEEEecCHHHhCCCCCCCCccccccCCC
Confidence            999996421         12355778899999999998887754    456799999998765432            13


Q ss_pred             CccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhc-
Q 021960          179 PHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGL-  257 (305)
Q Consensus       179 ~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  257 (305)
                      ...|+.+|.+.+.+++.++.++   +++++.+.|+.+..+...   +...             ........+....... 
T Consensus       134 ~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~~~g~~~~---~~~~-------------~~~~~~~~~~~~~~~~~  194 (317)
T 3ajr_A          134 RTMFGVTKIAAELLGQYYYEKF---GLDVRSLRYPGIISYKAE---PTAG-------------TTDYAVEIFYYAVKREK  194 (317)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECSSSC---CCSC-------------SSTHHHHHHHHHHTTCC
T ss_pred             CchHHHHHHHHHHHHHHHHHhc---CCeEEEEecCcEeccCCC---CCCc-------------chhHHHHHHHHHHhCCC
Confidence            5689999999999999888764   799999986655443210   0000             0000111111111100 


Q ss_pred             ------CCCCCCCCCHHHHHHHHHHhccCCC-CceeccEEEecCC
Q 021960          258 ------GNLKGTTLRSKDIAEAALYLASDES-RYVSGHNLVVDGG  295 (305)
Q Consensus       258 ------~~~~~~~~~~~dva~~v~~l~s~~~-~~~tG~~i~idgG  295 (305)
                            +.....++.++|+|++++.++.... ...+|+++++.|+
T Consensus       195 ~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~~~~g~~~~i~~~  239 (317)
T 3ajr_A          195 YKCYLAPNRALPMMYMPDALKALVDLYEADRDKLVLRNGYNVTAY  239 (317)
T ss_dssp             EEECSCTTCCEEEEEHHHHHHHHHHHHHCCGGGCSSCSCEECCSE
T ss_pred             ceeecCccceeeeeEHHHHHHHHHHHHhCCccccccCceEecCCc
Confidence                  0112234578999999988876543 2335788998764

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.82  E-value=4e-19  Score=156.39  Aligned_cols=202  Identities=14%  Similarity=0.091  Sum_probs=145.0

Q ss_pred             CEEEEecCCCchHHHHHHHHHHc--CCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 021960           32 KVAIITGGARGIGEAAVRLFARH--GAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDI  109 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~--g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~  109 (305)
                      |++|||||+|+||+++++.|+++  |++|++++|+......+..    ..+.++.+|++|.+++.++++       .+|+
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~----~~~~~~~~D~~d~~~l~~~~~-------~~d~   69 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLAD----QGVEVRHGDYNQPESLQKAFA-------GVSK   69 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHH----TTCEEEECCTTCHHHHHHHTT-------TCSE
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhh----cCCeEEEeccCCHHHHHHHHh-------cCCE
Confidence            46899999999999999999998  9999999998655443321    247889999999988887764       5899


Q ss_pred             EEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhHHHH
Q 021960          110 LYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAI  189 (305)
Q Consensus       110 li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKaa~  189 (305)
                      |||+||.. .          . +      ++|+.++.++++++.    +.+.++||++||.....   ....|+.+|.+.
T Consensus        70 vi~~a~~~-~----------~-~------~~n~~~~~~l~~a~~----~~~~~~~v~~Ss~~~~~---~~~~y~~~K~~~  124 (287)
T 2jl1_A           70 LLFISGPH-Y----------D-N------TLLIVQHANVVKAAR----DAGVKHIAYTGYAFAEE---SIIPLAHVHLAT  124 (287)
T ss_dssp             EEECCCCC-S----------C-H------HHHHHHHHHHHHHHH----HTTCSEEEEEEETTGGG---CCSTHHHHHHHH
T ss_pred             EEEcCCCC-c----------C-c------hHHHHHHHHHHHHHH----HcCCCEEEEECCCCCCC---CCCchHHHHHHH
Confidence            99999852 0          1 1      567888777777664    35567999999987642   234799999999


Q ss_pred             HHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCCHHH
Q 021960          190 VGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSKD  269 (305)
Q Consensus       190 ~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  269 (305)
                      +.+++.       .+++++.++||.+.+++....+.                   ..... .......+.....++.++|
T Consensus       125 E~~~~~-------~~~~~~ilrp~~~~~~~~~~~~~-------------------~~~~~-~~~~~~~~~~~~~~i~~~D  177 (287)
T 2jl1_A          125 EYAIRT-------TNIPYTFLRNALYTDFFVNEGLR-------------------ASTES-GAIVTNAGSGIVNSVTRNE  177 (287)
T ss_dssp             HHHHHH-------TTCCEEEEEECCBHHHHSSGGGH-------------------HHHHH-TEEEESCTTCCBCCBCHHH
T ss_pred             HHHHHH-------cCCCeEEEECCEeccccchhhHH-------------------HHhhC-CceeccCCCCccCccCHHH
Confidence            998753       58999999999987764111110                   00000 0000011123346789999


Q ss_pred             HHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          270 IAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       270 va~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      +|++++++++...  .+|+++++.||...
T Consensus       178 va~~~~~~~~~~~--~~g~~~~i~~~~~~  204 (287)
T 2jl1_A          178 LALAAATVLTEEG--HENKTYNLVSNQPW  204 (287)
T ss_dssp             HHHHHHHHHTSSS--CTTEEEEECCSSCB
T ss_pred             HHHHHHHHhcCCC--CCCcEEEecCCCcC
Confidence            9999999997643  47999999998543

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=99.82  E-value=1.1e-19  Score=161.43  Aligned_cols=224  Identities=13%  Similarity=0.121  Sum_probs=150.7

Q ss_pred             EEEEecCCCchHHHHHHHHHHcC-CeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEEE
Q 021960           33 VAIITGGARGIGEAAVRLFARHG-AKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILY  111 (305)
Q Consensus        33 ~vlVtGas~giG~~ia~~l~~~g-~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~li  111 (305)
                      ++|||||+|+||++++++|+++| +.|++++|+....... . ..+  +. +.+|++|.++++.+++...  ++++|+||
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~-~-~~~--~~-~~~d~~~~~~~~~~~~~~~--~~~~d~vi   73 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFV-N-LVD--LN-IADYMDKEDFLIQIMAGEE--FGDVEAIF   73 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGH-H-HHT--SC-CSEEEEHHHHHHHHHTTCC--CSSCCEEE
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCchhh-h-cCc--ce-eccccccHHHHHHHHhccc--cCCCcEEE
Confidence            48999999999999999999999 8999998876542111 1 111  22 6789998888777664110  12699999


Q ss_pred             EcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCC-----------CCc
Q 021960          112 NNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGL-----------GPH  180 (305)
Q Consensus       112 ~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~-----------~~~  180 (305)
                      |+||....          +.+++++.+++|+.++.++++++.+    .+. +||++||.+.+-+.+           ...
T Consensus        74 ~~a~~~~~----------~~~~~~~~~~~n~~~~~~l~~a~~~----~~~-~~v~~SS~~v~g~~~~~~~~E~~~~~p~~  138 (310)
T 1eq2_A           74 HEGACSST----------TEWDGKYMMDNNYQYSKELLHYCLE----REI-PFLYASSAATYGGRTSDFIESREYEKPLN  138 (310)
T ss_dssp             ECCSCCCT----------TCCCHHHHHHHTHHHHHHHHHHHHH----HTC-CEEEEEEGGGGTTCCSCBCSSGGGCCCSS
T ss_pred             ECcccccC----------cccCHHHHHHHHHHHHHHHHHHHHH----cCC-eEEEEeeHHHhCCCCCCCCCCCCCCCCCC
Confidence            99996422          1234577889999999988888765    344 899999986543221           246


Q ss_pred             cchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHH--HHhhc-
Q 021960          181 AYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEE--FVSGL-  257 (305)
Q Consensus       181 ~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-  257 (305)
                      .|+.+|.+.+.+++.++.+   .|++++.++||.+.++.........  .           .....++.+..  ....+ 
T Consensus       139 ~Y~~sK~~~e~~~~~~~~~---~g~~~~~lrp~~v~G~~~~~~~~~~--~-----------~~~~~~~~~~~~~~~~~~~  202 (310)
T 1eq2_A          139 VYGYSKFLFDEYVRQILPE---ANSQIVGFRYFNVYGPREGHKGSMA--S-----------VAFHLNTQLNNGESPKLFE  202 (310)
T ss_dssp             HHHHHHHHHHHHHHHHGGG---CSSCEEEEEECEEESSSCGGGGGGS--C-----------HHHHHHHHHHC--------
T ss_pred             hhHHHHHHHHHHHHHHHHH---cCCCEEEEeCCcEECcCCCCCCccc--h-----------HHHHHHHHHHcCCCcEEec
Confidence            7999999999999998866   4899999999999887532100000  0           00011111100  00000 


Q ss_pred             -CCC-CCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          258 -GNL-KGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       258 -~~~-~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                       +.. ...++.++|+|++++.++....    |+++++.+|...
T Consensus       203 ~g~~~~~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~~~  241 (310)
T 1eq2_A          203 GSENFKRDFVYVGDVADVNLWFLENGV----SGIFNLGTGRAE  241 (310)
T ss_dssp             -----CBCEEEHHHHHHHHHHHHHHCC----CEEEEESCSCCB
T ss_pred             CCCcceEccEEHHHHHHHHHHHHhcCC----CCeEEEeCCCcc
Confidence             112 3456789999999999997653    889999887543

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.82  E-value=1e-19  Score=158.89  Aligned_cols=194  Identities=17%  Similarity=0.158  Sum_probs=139.0

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEEEE
Q 021960           33 VAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILYN  112 (305)
Q Consensus        33 ~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~li~  112 (305)
                      ++|||||+|+||+++++.|++ |++|++++|+....       .+     +.+|++|.++++++++..     ++|+|||
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~-g~~V~~~~r~~~~~-------~~-----~~~Dl~~~~~~~~~~~~~-----~~d~vi~   63 (273)
T 2ggs_A            2 RTLITGASGQLGIELSRLLSE-RHEVIKVYNSSEIQ-------GG-----YKLDLTDFPRLEDFIIKK-----RPDVIIN   63 (273)
T ss_dssp             CEEEETTTSHHHHHHHHHHTT-TSCEEEEESSSCCT-------TC-----EECCTTSHHHHHHHHHHH-----CCSEEEE
T ss_pred             EEEEECCCChhHHHHHHHHhc-CCeEEEecCCCcCC-------CC-----ceeccCCHHHHHHHHHhc-----CCCEEEE
Confidence            689999999999999999994 89999999986421       11     789999999999988765     6999999


Q ss_pred             cCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCC----------CCccc
Q 021960          113 NAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGL----------GPHAY  182 (305)
Q Consensus       113 nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~----------~~~~Y  182 (305)
                      |||....        +.+.+++++.+++|+.++.++++++.+    .+ ++||++||...+.+.+          ....|
T Consensus        64 ~a~~~~~--------~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~iv~~SS~~~~~~~~~~~~e~~~~~~~~~Y  130 (273)
T 2ggs_A           64 AAAMTDV--------DKCEIEKEKAYKINAEAVRHIVRAGKV----ID-SYIVHISTDYVFDGEKGNYKEEDIPNPINYY  130 (273)
T ss_dssp             CCCCCCH--------HHHHHCHHHHHHHHTHHHHHHHHHHHH----TT-CEEEEEEEGGGSCSSSCSBCTTSCCCCSSHH
T ss_pred             CCcccCh--------hhhhhCHHHHHHHhHHHHHHHHHHHHH----hC-CeEEEEecceeEcCCCCCcCCCCCCCCCCHH
Confidence            9996421        123467889999999999999988864    33 5999999988765433          25689


Q ss_pred             hhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccc--cccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHH--HhhcC
Q 021960          183 TASKHAIVGLTKNAACELGRYGIRVNCISPFGVA--TSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEF--VSGLG  258 (305)
Q Consensus       183 ~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~--T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~  258 (305)
                      +.+|++++.+++.    +     ....+.|+.+.  +++...                       .......-  .....
T Consensus       131 ~~sK~~~e~~~~~----~-----~~~~iR~~~v~G~~~~~~~-----------------------~~~~~~~~~~~~~~~  178 (273)
T 2ggs_A          131 GLSKLLGETFALQ----D-----DSLIIRTSGIFRNKGFPIY-----------------------VYKTLKEGKTVFAFK  178 (273)
T ss_dssp             HHHHHHHHHHHCC----T-----TCEEEEECCCBSSSSHHHH-----------------------HHHHHHTTCCEEEES
T ss_pred             HHHHHHHHHHHhC----C-----CeEEEeccccccccHHHHH-----------------------HHHHHHcCCCEEeec
Confidence            9999999999877    2     23445555554  222110                       00010000  00001


Q ss_pred             CCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecC
Q 021960          259 NLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDG  294 (305)
Q Consensus       259 ~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idg  294 (305)
                      . ...++.++|+|+.+++++++..   +| +++++|
T Consensus       179 ~-~~~~~~~~dva~~i~~~~~~~~---~g-~~~i~~  209 (273)
T 2ggs_A          179 G-YYSPISARKLASAILELLELRK---TG-IIHVAG  209 (273)
T ss_dssp             C-EECCCBHHHHHHHHHHHHHHTC---CE-EEECCC
T ss_pred             C-CCCceEHHHHHHHHHHHHhcCc---CC-eEEECC
Confidence            1 3467899999999999998652   45 888887

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=99.81  E-value=5.6e-20  Score=164.12  Aligned_cols=217  Identities=14%  Similarity=0.058  Sum_probs=144.2

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcc----hhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHh
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDT----LGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSR  103 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~----~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~  103 (305)
                      .+.++++|||||+|+||+++++.|+++|++|++++|+..    ....+.......++.++.+|++               
T Consensus         4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~---------------   68 (321)
T 3vps_A            4 NTLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLS---------------   68 (321)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHHT---------------
T ss_pred             ccCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhccCCCeeEEeCccc---------------
Confidence            345789999999999999999999999999999998765    2222222122234555566655               


Q ss_pred             cCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCC-------
Q 021960          104 YGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGG-------  176 (305)
Q Consensus       104 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~-------  176 (305)
                        .+|+|||+||.....     .   ..++....++ |+.++.++++++..    .+..+||++||.+.+...       
T Consensus        69 --~~d~vi~~a~~~~~~-----~---~~~~~~~~~~-n~~~~~~ll~a~~~----~~v~~~v~~SS~~v~~~~~~~~~~E  133 (321)
T 3vps_A           69 --DVRLVYHLASHKSVP-----R---SFKQPLDYLD-NVDSGRHLLALCTS----VGVPKVVVGSTCEVYGQADTLPTPE  133 (321)
T ss_dssp             --TEEEEEECCCCCCHH-----H---HTTSTTTTHH-HHHHHHHHHHHHHH----HTCCEEEEEEEGGGGCSCSSSSBCT
T ss_pred             --cCCEEEECCccCChH-----H---HHhCHHHHHH-HHHHHHHHHHHHHH----cCCCeEEEecCHHHhCCCCCCCCCC
Confidence              699999999975321     0   0011223455 89998888877754    345699999998755332       


Q ss_pred             ----CCCccchhhHHHHHHHHHHHHHHHCcCCc-EEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHH
Q 021960          177 ----LGPHAYTASKHAIVGLTKNAACELGRYGI-RVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKME  251 (305)
Q Consensus       177 ----~~~~~Y~~sKaa~~~~~~~la~e~~~~~i-~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (305)
                          .....|+.+|.+.+.+++.++.+   .++ +++.++|+.+..+.....  .               .....+..+.
T Consensus       134 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~ilRp~~v~G~~~~~~--~---------------~~~~~~~~~~  193 (321)
T 3vps_A          134 DSPLSPRSPYAASKVGLEMVAGAHQRA---SVAPEVGIVRFFNVYGPGERPD--A---------------LVPRLCANLL  193 (321)
T ss_dssp             TSCCCCCSHHHHHHHHHHHHHHHHHHS---SSSCEEEEEEECEEECTTCCTT--S---------------HHHHHHHHHH
T ss_pred             CCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCceEEEEeccccCcCCCCC--C---------------hHHHHHHHHH
Confidence                22468999999999999998876   478 999999999987642210  0               0001111111


Q ss_pred             HHH--hhc--CCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          252 EFV--SGL--GNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       252 ~~~--~~~--~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      .-.  ...  +.....++.++|+|++++++++...   .| ++++.+|...
T Consensus       194 ~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~---~g-~~~i~~~~~~  240 (321)
T 3vps_A          194 TRNELPVEGDGEQRRDFTYITDVVDKLVALANRPL---PS-VVNFGSGQSL  240 (321)
T ss_dssp             HHSEEEEETTSCCEECEEEHHHHHHHHHHGGGSCC---CS-EEEESCSCCE
T ss_pred             cCCCeEEeCCCCceEceEEHHHHHHHHHHHHhcCC---CC-eEEecCCCcc
Confidence            100  000  1122345789999999999998764   38 9999988643

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=99.81  E-value=1.2e-19  Score=161.43  Aligned_cols=223  Identities=17%  Similarity=0.111  Sum_probs=149.0

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRL  107 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~i  107 (305)
                      .++++++|||||+|+||+++++.|+++|+      +....         ...+.++.+|++|.+++.++++..     ++
T Consensus         3 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~~~---------~~~~~~~~~D~~d~~~~~~~~~~~-----~~   62 (319)
T 4b8w_A            3 YFQSMRILVTGGSGLVGKAIQKVVADGAG------LPGED---------WVFVSSKDADLTDTAQTRALFEKV-----QP   62 (319)
T ss_dssp             CCCCCEEEEETCSSHHHHHHHHHHHTTTC------CTTCE---------EEECCTTTCCTTSHHHHHHHHHHS-----CC
T ss_pred             cccCCeEEEECCCcHHHHHHHHHHHhcCC------ccccc---------ccccCceecccCCHHHHHHHHhhc-----CC
Confidence            46789999999999999999999999997      11100         011334578999999998887753     69


Q ss_pred             cEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccC------------
Q 021960          108 DILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMG------------  175 (305)
Q Consensus       108 d~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~------------  175 (305)
                      |+|||+|+.....       ..+.++..+.+++|+.++.++++.+..    .+..+||++||.+.+-.            
T Consensus        63 d~Vih~A~~~~~~-------~~~~~~~~~~~~~nv~gt~~ll~a~~~----~~~~~~v~~SS~~vyg~~~~~~~~E~~~~  131 (319)
T 4b8w_A           63 THVIHLAAMVGGL-------FRNIKYNLDFWRKNVHMNDNVLHSAFE----VGARKVVSCLSTCIFPDKTTYPIDETMIH  131 (319)
T ss_dssp             SEEEECCCCCCCH-------HHHTTCHHHHHHHHHHHHHHHHHHHHH----TTCSEEEEECCGGGSCSSCCSSBCGGGGG
T ss_pred             CEEEECceecccc-------cccccCHHHHHHHHHHHHHHHHHHHHH----cCCCeEEEEcchhhcCCCCCCCccccccc
Confidence            9999999974210       012234567789999999888877644    45568999999865421            


Q ss_pred             ----CCCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHH
Q 021960          176 ----GLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKME  251 (305)
Q Consensus       176 ----~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (305)
                          .+....|+.+|.+.+.+++.++.+.   ++++..++|+.+..+........   .          .-....+..+.
T Consensus       132 ~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~Gp~~~~~~~~---~----------~~~~~~~~~~~  195 (319)
T 4b8w_A          132 NGPPHNSNFGYSYAKRMIDVQNRAYFQQY---GCTFTAVIPTNVFGPHDNFNIED---G----------HVLPGLIHKVH  195 (319)
T ss_dssp             BSCCCSSSHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECTTCCCCTTT---S----------CHHHHHHHHHH
T ss_pred             cCCCCCCcchHHHHHHHHHHHHHHHHHhh---CCCEEEEeeccccCCCCCCCCcc---c----------cccHHHHHHHH
Confidence                1122369999999999999998874   79999999999987742110000   0          00001111110


Q ss_pred             H-HHhh--c-----CCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          252 E-FVSG--L-----GNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       252 ~-~~~~--~-----~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      . ....  +     +.....++.++|+|++++.++..... ..|+++++.+|...
T Consensus       196 ~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~-~~~~~~ni~~~~~~  249 (319)
T 4b8w_A          196 LAKSSGSALTVWGTGNPRRQFIYSLDLAQLFIWVLREYNE-VEPIILSVGEEDEV  249 (319)
T ss_dssp             HHHHHTCCEEEESCSCCEECEEEHHHHHHHHHHHHHHCCC-SSCEEECCCGGGCE
T ss_pred             HHhccCCceEEeCCCCeeEEEEeHHHHHHHHHHHHhcccc-CCceEEEecCCCce
Confidence            0 1111  0     11223457899999999999876322 45778888876543

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.81  E-value=6.8e-20  Score=161.41  Aligned_cols=199  Identities=16%  Similarity=0.073  Sum_probs=144.0

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEEEE
Q 021960           33 VAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILYN  112 (305)
Q Consensus        33 ~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~li~  112 (305)
                      ++|||||+|+||+++++.|+++|++|++++|.                   .+|++|.++++++++..     ++|+|||
T Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~-------------------~~D~~d~~~~~~~~~~~-----~~d~vi~   62 (287)
T 3sc6_A            7 RVIITGANGQLGKQLQEELNPEEYDIYPFDKK-------------------LLDITNISQVQQVVQEI-----RPHIIIH   62 (287)
T ss_dssp             EEEEESTTSHHHHHHHHHSCTTTEEEEEECTT-------------------TSCTTCHHHHHHHHHHH-----CCSEEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeccc-------------------ccCCCCHHHHHHHHHhc-----CCCEEEE
Confidence            89999999999999999999999999999882                   27999999999888765     6999999


Q ss_pred             cCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCC-----------CCCcc
Q 021960          113 NAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGG-----------LGPHA  181 (305)
Q Consensus       113 nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~-----------~~~~~  181 (305)
                      +||....        +...+++++.+++|+.++.++++.+.+.    + .+||++||.+.+.+.           .....
T Consensus        63 ~a~~~~~--------~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~-~~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~  129 (287)
T 3sc6_A           63 CAAYTKV--------DQAEKERDLAYVINAIGARNVAVASQLV----G-AKLVYISTDYVFQGDRPEGYDEFHNPAPINI  129 (287)
T ss_dssp             CCCCCCH--------HHHTTCHHHHHHHHTHHHHHHHHHHHHH----T-CEEEEEEEGGGSCCCCSSCBCTTSCCCCCSH
T ss_pred             CCcccCh--------HHHhcCHHHHHHHHHHHHHHHHHHHHHc----C-CeEEEEchhhhcCCCCCCCCCCCCCCCCCCH
Confidence            9997532        1122457788999999999998887552    3 379999998765322           23568


Q ss_pred             chhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHH--HHhhcCC
Q 021960          182 YTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEE--FVSGLGN  259 (305)
Q Consensus       182 Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~  259 (305)
                      |+.+|.+.+.+++.++.       .+..++|+.+..+.......                   ........  .....+.
T Consensus       130 Y~~sK~~~E~~~~~~~~-------~~~ilR~~~v~G~~~~~~~~-------------------~~~~~~~~~~~~~~~~~  183 (287)
T 3sc6_A          130 YGASKYAGEQFVKELHN-------KYFIVRTSWLYGKYGNNFVK-------------------TMIRLGKEREEISVVAD  183 (287)
T ss_dssp             HHHHHHHHHHHHHHHCS-------SEEEEEECSEECSSSCCHHH-------------------HHHHHHTTCSEEEEECS
T ss_pred             HHHHHHHHHHHHHHhCC-------CcEEEeeeeecCCCCCcHHH-------------------HHHHHHHcCCCeEeecC
Confidence            99999999999987654       35789999987764211100                   00110000  0000112


Q ss_pred             CCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          260 LKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       260 ~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      ....++.++|+|+++++++....    ++++++.+|...
T Consensus       184 ~~~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~~~~  218 (287)
T 3sc6_A          184 QIGSPTYVADLNVMINKLIHTSL----YGTYHVSNTGSC  218 (287)
T ss_dssp             CEECCEEHHHHHHHHHHHHTSCC----CEEEECCCBSCE
T ss_pred             cccCceEHHHHHHHHHHHHhCCC----CCeEEEcCCCcc
Confidence            23456679999999999998764    668998887643

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.80  E-value=9.2e-19  Score=165.49  Aligned_cols=228  Identities=14%  Similarity=0.039  Sum_probs=155.3

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHc---CCeEEEEecCcchhhhHh---hhcC--------------CCCeEEEEec
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARH---GAKVVIADVEDTLGSVLA---STLA--------------PAPVTFVHCD   86 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~---g~~vv~~~r~~~~~~~~~---~~~~--------------~~~v~~~~~D   86 (305)
                      ...++|+||||||+|+||++++++|+++   |++|+++.|+........   +.+.              ..++.++.+|
T Consensus        69 ~~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~D  148 (478)
T 4dqv_A           69 PSPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGD  148 (478)
T ss_dssp             CCSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECC
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeE
Confidence            3557899999999999999999999999   899999999765432211   1111              2579999999


Q ss_pred             CC------CHHHHHHHHHHHHHhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC
Q 021960           87 VS------LEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRG  160 (305)
Q Consensus        87 ~~------d~~~i~~~~~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~  160 (305)
                      ++      |.++++.+++       .+|+||||||....            +.+++.+++|+.++.++++.+.    +.+
T Consensus       149 l~~~~~gld~~~~~~~~~-------~~D~Vih~Aa~~~~------------~~~~~~~~~Nv~gt~~ll~aa~----~~~  205 (478)
T 4dqv_A          149 KSEPDLGLDQPMWRRLAE-------TVDLIVDSAAMVNA------------FPYHELFGPNVAGTAELIRIAL----TTK  205 (478)
T ss_dssp             TTSGGGGCCHHHHHHHHH-------HCCEEEECCSSCSB------------SSCCEEHHHHHHHHHHHHHHHT----SSS
T ss_pred             CCCcccCCCHHHHHHHHc-------CCCEEEECccccCC------------cCHHHHHHHHHHHHHHHHHHHH----hCC
Confidence            98      6667776665       58999999997532            1234567899999888877664    345


Q ss_pred             CCEEEEecccccccCCC----------------------CCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccc
Q 021960          161 GGCIISTASVAGVMGGL----------------------GPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATS  218 (305)
Q Consensus       161 ~~~iv~isS~~~~~~~~----------------------~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~  218 (305)
                      ..+||++||.+.+....                      ....|+.+|.+.+.+++.++.+.   |+++++++||.|..+
T Consensus       206 ~~~~V~iSS~~v~~~~~~~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ivRpg~v~G~  282 (478)
T 4dqv_A          206 LKPFTYVSTADVGAAIEPSAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLC---ALPVAVFRCGMILAD  282 (478)
T ss_dssp             CCCEEEEEEGGGGTTSCTTTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECC
T ss_pred             CCeEEEEeehhhcCccCCCCcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHh---CCCeEEEECceeeCC
Confidence            56899999976533211                      11349999999999999998764   799999999999775


Q ss_pred             cc-hhcccCCCCCchhhhhhccCCCcHHHHHH-HHHHHh--hcC-------------CCCCCCCCHHHHHHHHHHhccCC
Q 021960          219 ML-VNAWRNSGDGEEEDECMNFGIPSQKEVRK-MEEFVS--GLG-------------NLKGTTLRSKDIAEAALYLASDE  281 (305)
Q Consensus       219 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~-------------~~~~~~~~~~dva~~v~~l~s~~  281 (305)
                      .. ...+..                 .+.+.. +.....  ...             ...-.++..+|+|++++.++...
T Consensus       283 ~~~~g~~~~-----------------~~~~~~l~~~~~~~g~~P~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~~~~  345 (478)
T 4dqv_A          283 TSYAGQLNM-----------------SDWVTRMVLSLMATGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARV  345 (478)
T ss_dssp             SSSSSCCCT-----------------TBHHHHHHHHHHHHCEEESCSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHHHTT
T ss_pred             CccCCcCCH-----------------HHHHHHHHHHHHHcCcccccccccccccccccceeeeeeHHHHHHHHHHHHhhc
Confidence            31 111000                 011111 111111  100             11224578999999999987641


Q ss_pred             C--CceeccEEEecCCcc
Q 021960          282 S--RYVSGHNLVVDGGVT  297 (305)
Q Consensus       282 ~--~~~tG~~i~idgG~~  297 (305)
                      .  ..-.|+++++.++..
T Consensus       346 ~~~~~~~~~~ynv~~~~~  363 (478)
T 4dqv_A          346 AGSSLAGFATYHVMNPHD  363 (478)
T ss_dssp             C-CCCCSEEEEEESCCCC
T ss_pred             ccCCCCCCceEEecCCCC
Confidence            1  123588999877754

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.80  E-value=1.6e-18  Score=171.19  Aligned_cols=174  Identities=16%  Similarity=0.147  Sum_probs=129.0

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHh---hhcCCCCeEEEEecCCCHHHHHHHHHHHHHh
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLA---STLAPAPVTFVHCDVSLEEDIENLINSTVSR  103 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~---~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~  103 (305)
                      ..+++|+||||||+|+||+++++.|+++|++|++++|+........   ......++.++.+|++|.+++++++++.   
T Consensus         7 ~~~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~~---   83 (699)
T 1z45_A            7 SESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEY---   83 (699)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHS---
T ss_pred             cccCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCHHHHHHHHHhC---
Confidence            4567899999999999999999999999999999988654321111   1112345788999999999998887643   


Q ss_pred             cCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccC--------
Q 021960          104 YGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMG--------  175 (305)
Q Consensus       104 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~--------  175 (305)
                        .+|+|||+||....    ..    ..+..++.+++|+.++.++++++..    .+.++||++||.+.+-.        
T Consensus        84 --~~D~Vih~A~~~~~----~~----~~~~~~~~~~~Nv~gt~~ll~a~~~----~~~~~iV~~SS~~vyg~~~~~~~~~  149 (699)
T 1z45_A           84 --KIDSVIHFAGLKAV----GE----STQIPLRYYHNNILGTVVLLELMQQ----YNVSKFVFSSSATVYGDATRFPNMI  149 (699)
T ss_dssp             --CCCEEEECCSCCCH----HH----HHHSHHHHHHHHHHHHHHHHHHHHH----HTCCEEEEEEEGGGGCCGGGSTTCC
T ss_pred             --CCCEEEECCcccCc----Cc----cccCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEECcHHHhCCCccccccC
Confidence              69999999996421    00    1233456789999999888776543    45679999999765421        


Q ss_pred             -------CCCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccc
Q 021960          176 -------GLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATS  218 (305)
Q Consensus       176 -------~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~  218 (305)
                             ......|+.+|++.+.+++.++.+. ..++++..++|+.+..+
T Consensus       150 ~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~g~~~~ilR~~~vyG~  198 (699)
T 1z45_A          150 PIPEECPLGPTNPYGHTKYAIENILNDLYNSD-KKSWKFAILRYFNPIGA  198 (699)
T ss_dssp             SBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHS-TTSCEEEEEEECEEECC
T ss_pred             CccccCCCCCCChHHHHHHHHHHHHHHHHHhc-cCCCcEEEEEeccccCC
Confidence                   1134689999999999999998775 35899999999888765

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=99.80  E-value=6.3e-20  Score=162.51  Aligned_cols=206  Identities=15%  Similarity=0.053  Sum_probs=144.8

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEEEE
Q 021960           33 VAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILYN  112 (305)
Q Consensus        33 ~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~li~  112 (305)
                      ++|||||+|+||+++++.|+ +|++|++++|+..               ++.+|++|.++++++++..     ++|+|||
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~---------------~~~~D~~d~~~~~~~~~~~-----~~d~vih   60 (299)
T 1n2s_A            2 NILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK---------------EFCGDFSNPKGVAETVRKL-----RPDVIVN   60 (299)
T ss_dssp             EEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS---------------SSCCCTTCHHHHHHHHHHH-----CCSEEEE
T ss_pred             eEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc---------------cccccCCCHHHHHHHHHhc-----CCCEEEE
Confidence            69999999999999999999 8999999998751               2568999999998887754     6999999


Q ss_pred             cCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCC-----------CCcc
Q 021960          113 NAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGL-----------GPHA  181 (305)
Q Consensus       113 nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~-----------~~~~  181 (305)
                      +||.....        .+.+++++.+++|+.++.++++++..    .+ .++|++||.+.+.+..           ....
T Consensus        61 ~a~~~~~~--------~~~~~~~~~~~~n~~~~~~l~~a~~~----~~-~~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~  127 (299)
T 1n2s_A           61 AAAHTAVD--------KAESEPELAQLLNATSVEAIAKAANE----TG-AWVVHYSTDYVFPGTGDIPWQETDATSPLNV  127 (299)
T ss_dssp             CCCCCCHH--------HHTTCHHHHHHHHTHHHHHHHHHHTT----TT-CEEEEEEEGGGSCCCTTCCBCTTSCCCCSSH
T ss_pred             CcccCCHh--------hhhcCHHHHHHHHHHHHHHHHHHHHH----cC-CcEEEEecccEEeCCCCCCCCCCCCCCCccH
Confidence            99964210        11234677889999999888887643    33 4899999986653321           2468


Q ss_pred             chhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHH--HhhcCC
Q 021960          182 YTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEF--VSGLGN  259 (305)
Q Consensus       182 Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~  259 (305)
                      |+.+|.+.+.+++.++.       +++.++||.+.++.....+                   ....+....-  ....+.
T Consensus       128 Y~~sK~~~E~~~~~~~~-------~~~ilRp~~v~G~~~~~~~-------------------~~~~~~~~~~~~~~~~~~  181 (299)
T 1n2s_A          128 YGKTKLAGEKALQDNCP-------KHLIFRTSWVYAGKGNNFA-------------------KTMLRLAKERQTLSVIND  181 (299)
T ss_dssp             HHHHHHHHHHHHHHHCS-------SEEEEEECSEECSSSCCHH-------------------HHHHHHHHHCSEEEEECS
T ss_pred             HHHHHHHHHHHHHHhCC-------CeEEEeeeeecCCCcCcHH-------------------HHHHHHHhcCCCEEeecC
Confidence            99999999999877642       6889999999887421110                   0111111110  000112


Q ss_pred             CCCCCCCHHHHHHHHHHhccCCCCce-eccEEEecCCccc
Q 021960          260 LKGTTLRSKDIAEAALYLASDESRYV-SGHNLVVDGGVTT  298 (305)
Q Consensus       260 ~~~~~~~~~dva~~v~~l~s~~~~~~-tG~~i~idgG~~~  298 (305)
                      ....++.++|+|+++++++....... .|+++++.+|...
T Consensus       182 ~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~i~~~~~~  221 (299)
T 1n2s_A          182 QYGAPTGAELLADCTAHAIRVALNKPEVAGLYHLVAGGTT  221 (299)
T ss_dssp             CEECCEEHHHHHHHHHHHHHHHHHCGGGCEEEECCCBSCE
T ss_pred             cccCCeeHHHHHHHHHHHHHHhccccccCceEEEeCCCCC
Confidence            22445679999999999987542112 4889999887543

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.80  E-value=1.3e-18  Score=153.00  Aligned_cols=198  Identities=16%  Similarity=0.129  Sum_probs=137.1

Q ss_pred             EEEEecCCCchHHHHHHHHHHc--CCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEE
Q 021960           33 VAIITGGARGIGEAAVRLFARH--GAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDIL  110 (305)
Q Consensus        33 ~vlVtGas~giG~~ia~~l~~~--g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~l  110 (305)
                      ++|||||+|+||+++++.|+++  |++|++++|+......+..    ..+.++.+|++|.++++++++       .+|+|
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~D~~d~~~~~~~~~-------~~d~v   69 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAA----QGITVRQADYGDEAALTSALQ-------GVEKL   69 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHH----TTCEEEECCTTCHHHHHHHTT-------TCSEE
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhc----CCCeEEEcCCCCHHHHHHHHh-------CCCEE
Confidence            3799999999999999999998  9999999998665443322    247889999999988887764       58999


Q ss_pred             EEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhHHHHH
Q 021960          111 YNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIV  190 (305)
Q Consensus       111 i~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKaa~~  190 (305)
                      ||+||...                    ..|+.++.++++++    .+.+.++||++||....   +....|+.+|.+.+
T Consensus        70 i~~a~~~~--------------------~~~~~~~~~l~~a~----~~~~~~~~v~~Ss~~~~---~~~~~y~~sK~~~e  122 (286)
T 2zcu_A           70 LLISSSEV--------------------GQRAPQHRNVINAA----KAAGVKFIAYTSLLHAD---TSPLGLADEHIETE  122 (286)
T ss_dssp             EECC----------------------------CHHHHHHHHH----HHHTCCEEEEEEETTTT---TCCSTTHHHHHHHH
T ss_pred             EEeCCCCc--------------------hHHHHHHHHHHHHH----HHcCCCEEEEECCCCCC---CCcchhHHHHHHHH
Confidence            99998420                    02455554555444    44556799999998765   23357999999999


Q ss_pred             HHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCCHHHH
Q 021960          191 GLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSKDI  270 (305)
Q Consensus       191 ~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv  270 (305)
                      .+++.       .+++++.++||++.+++.... .                   ...+ -.......+.....++.++|+
T Consensus       123 ~~~~~-------~~~~~~ilrp~~~~~~~~~~~-~-------------------~~~~-~~~~~~~~~~~~~~~i~~~Dv  174 (286)
T 2zcu_A          123 KMLAD-------SGIVYTLLRNGWYSENYLASA-P-------------------AALE-HGVFIGAAGDGKIASATRADY  174 (286)
T ss_dssp             HHHHH-------HCSEEEEEEECCBHHHHHTTH-H-------------------HHHH-HTEEEESCTTCCBCCBCHHHH
T ss_pred             HHHHH-------cCCCeEEEeChHHhhhhHHHh-H-------------------Hhhc-CCceeccCCCCccccccHHHH
Confidence            98763       479999999998877642100 0                   0000 000000001233457799999


Q ss_pred             HHHHHHhccCCCCceeccEEEecCCccc
Q 021960          271 AEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       271 a~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      |+++++++++..  .+|++++++||...
T Consensus       175 a~~~~~~~~~~~--~~g~~~~i~~~~~~  200 (286)
T 2zcu_A          175 AAAAARVISEAG--HEGKVYELAGDSAW  200 (286)
T ss_dssp             HHHHHHHHHSSS--CTTCEEEECCSSCB
T ss_pred             HHHHHHHhcCCC--CCCceEEEeCCCcC
Confidence            999999998643  37999999998543

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.78  E-value=1.5e-18  Score=165.29  Aligned_cols=224  Identities=13%  Similarity=0.039  Sum_probs=153.8

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHh---h-----------hcCCCCeEEEEecCCCHHHHHHH
Q 021960           31 GKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLA---S-----------TLAPAPVTFVHCDVSLEEDIENL   96 (305)
Q Consensus        31 ~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~---~-----------~~~~~~v~~~~~D~~d~~~i~~~   96 (305)
                      .++||||||+|+||++++++|.++|++|+++.|+........   +           .....++.++.+|++|.+++.  
T Consensus       150 ~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~--  227 (508)
T 4f6l_B          150 LGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV--  227 (508)
T ss_dssp             CEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC--
T ss_pred             CCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC--
Confidence            579999999999999999999999999999999876321111   1           012356999999999977766  


Q ss_pred             HHHHHHhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEeccccc--cc
Q 021960           97 INSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAG--VM  174 (305)
Q Consensus        97 ~~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~--~~  174 (305)
                            ....+|+|||||+....           ...++..+.+|+.++.++++.+..     ...++|++||.+.  ..
T Consensus       228 ------~~~~~D~Vih~Aa~~~~-----------~~~~~~~~~~Nv~gt~~ll~~a~~-----~~~~~v~iSS~~vG~~~  285 (508)
T 4f6l_B          228 ------LPENMDTIIHAGARTDH-----------FGDDDEFEKVNVQGTVDVIRLAQQ-----HHARLIYVSTISVGTYF  285 (508)
T ss_dssp             ------CSSCCSEEEECCCC-------------------CCHHHHHHHHHHHHHHHHT-----TTCEEEEEEESCTTSEE
T ss_pred             ------CccCCCEEEECCceecC-----------CCCHHHHhhhHHHHHHHHHHHHHh-----CCCcEEEeCChhhccCC
Confidence                  33579999999997521           234667789999999888887754     4578999999876  10


Q ss_pred             ----------------CCCCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhc
Q 021960          175 ----------------GGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMN  238 (305)
Q Consensus       175 ----------------~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~  238 (305)
                                      +......|+.+|.+.+.+++.++.    .|++++.+.||.+..+.....+....          
T Consensus       286 ~~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~gi~~~ilRp~~v~G~~~~~~~~~~~----------  351 (508)
T 4f6l_B          286 DIDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN----NGLDGRIVRVGNLTSPYNGRWHMRNI----------  351 (508)
T ss_dssp             CTTCSCCEECTTCSCSSBCCCSHHHHHHHHHHHHHHHHHH----TTCEEEEEEECCEESCSSSCCCCTTC----------
T ss_pred             ccCCcCcccccccccccccCCCcHHHHHHHHHHHHHHHHH----cCCCEEEEecceeccCCCCCcccCCc----------
Confidence                            011456899999999999988653    58999999999998875332211100          


Q ss_pred             cCCCcHHHHHHHHHHHhhcC------CCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          239 FGIPSQKEVRKMEEFVSGLG------NLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                         ........+........      .....++.++|+|+++++++....   .|+++++.+|...
T Consensus       352 ---~~~~~~~~i~~~~~~~~~~~~~g~~~~~~v~v~DvA~ai~~~~~~~~---~~~~~nl~~~~~~  411 (508)
T 4f6l_B          352 ---KTNRFSMVMNDLLQLDCIGVSMAEMPVDFSFVDTTARQIVALAQVNT---PQIIYHVLSPNKM  411 (508)
T ss_dssp             ---TTCHHHHHHHHHTTCSEEETTGGGSEEECEEHHHHHHHHHHHTTBCC---SCSEEEESCSCEE
T ss_pred             ---chHHHHHHHHHHHHcCCCCCCccCceEEEEcHHHHHHHHHHHHhCCC---CCCEEEeCCCCCC
Confidence               00011112222211111      112235689999999999998764   7999999988643

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=99.78  E-value=1.1e-19  Score=160.18  Aligned_cols=205  Identities=14%  Similarity=0.061  Sum_probs=145.2

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDI  109 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~  109 (305)
                      +++++|||| +|+||+++++.|+++|++|++++|+....        ..++.++.+|++|.++++++++      +++|+
T Consensus         2 ~~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~--------~~~~~~~~~Dl~d~~~~~~~~~------~~~d~   66 (286)
T 3gpi_A            2 SLSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM--------PAGVQTLIADVTRPDTLASIVH------LRPEI   66 (286)
T ss_dssp             CCCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC--------CTTCCEEECCTTCGGGCTTGGG------GCCSE
T ss_pred             CCCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc--------ccCCceEEccCCChHHHHHhhc------CCCCE
Confidence            467899999 59999999999999999999999986542        2458889999999988877664      36999


Q ss_pred             EEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCC-----------CC
Q 021960          110 LYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGG-----------LG  178 (305)
Q Consensus       110 li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~-----------~~  178 (305)
                      |||+||..             ..+.+..+++|+.++.++++++.    +.+.++||++||.+.+-..           ..
T Consensus        67 vih~a~~~-------------~~~~~~~~~~n~~~~~~ll~a~~----~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p  129 (286)
T 3gpi_A           67 LVYCVAAS-------------EYSDEHYRLSYVEGLRNTLSALE----GAPLQHVFFVSSTGVYGQEVEEWLDEDTPPIA  129 (286)
T ss_dssp             EEECHHHH-------------HHC-----CCSHHHHHHHHHHTT----TSCCCEEEEEEEGGGCCCCCSSEECTTSCCCC
T ss_pred             EEEeCCCC-------------CCCHHHHHHHHHHHHHHHHHHHh----hCCCCEEEEEcccEEEcCCCCCCCCCCCCCCC
Confidence            99999852             13345677889999877776654    4556799999998654321           13


Q ss_pred             CccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHH-HHhhc
Q 021960          179 PHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEE-FVSGL  257 (305)
Q Consensus       179 ~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  257 (305)
                      ...|+.+|.+.+.+ +..        ++++.+.|+.+..+........                       +.. .....
T Consensus       130 ~~~Y~~sK~~~E~~-~~~--------~~~~ilR~~~v~G~~~~~~~~~-----------------------~~~~~~~~~  177 (286)
T 3gpi_A          130 KDFSGKRMLEAEAL-LAA--------YSSTILRFSGIYGPGRLRMIRQ-----------------------AQTPEQWPA  177 (286)
T ss_dssp             CSHHHHHHHHHHHH-GGG--------SSEEEEEECEEEBTTBCHHHHH-----------------------TTCGGGSCS
T ss_pred             CChhhHHHHHHHHH-Hhc--------CCeEEEecccccCCCchhHHHH-----------------------HHhcccCCC
Confidence            56899999999888 442        8889999999987753211111                       000 00011


Q ss_pred             CCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          258 GNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       258 ~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      ......++.++|+|+++++++........|+++++.+|...
T Consensus       178 ~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (286)
T 3gpi_A          178 RNAWTNRIHRDDGAAFIAYLIQQRSHAVPERLYIVTDNQPL  218 (286)
T ss_dssp             SBCEECEEEHHHHHHHHHHHHHHHTTSCCCSEEEECCSCCE
T ss_pred             cCceeEEEEHHHHHHHHHHHHhhhccCCCCceEEEeCCCCC
Confidence            22334567899999999999986422356899999887643

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.76  E-value=5e-17  Score=143.25  Aligned_cols=196  Identities=12%  Similarity=0.077  Sum_probs=132.7

Q ss_pred             EEEEecCCCchHHHHHHHHHHc-CCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEEE
Q 021960           33 VAIITGGARGIGEAAVRLFARH-GAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILY  111 (305)
Q Consensus        33 ~vlVtGas~giG~~ia~~l~~~-g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~li  111 (305)
                      ++|||||+|+||+++++.|+++ |++|+++.|+......+    ....+.++.+|++|.++++++++       .+|+||
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~----~~~~v~~~~~D~~d~~~l~~~~~-------~~d~vi   70 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDD----WRGKVSVRQLDYFNQESMVEAFK-------GMDTVV   70 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGG----GBTTBEEEECCTTCHHHHHHHTT-------TCSEEE
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHh----hhCCCEEEEcCCCCHHHHHHHHh-------CCCEEE
Confidence            5899999999999999999998 99999999987654332    23458999999999998887764       689999


Q ss_pred             EcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhHHHHHH
Q 021960          112 NNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVG  191 (305)
Q Consensus       112 ~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKaa~~~  191 (305)
                      |+||....           .       ..|+.++    +.+++.+.+.+.++||++||......    ..|..++...  
T Consensus        71 ~~a~~~~~-----------~-------~~~~~~~----~~l~~aa~~~gv~~iv~~Ss~~~~~~----~~~~~~~~~~--  122 (289)
T 3e48_A           71 FIPSIIHP-----------S-------FKRIPEV----ENLVYAAKQSGVAHIIFIGYYADQHN----NPFHMSPYFG--  122 (289)
T ss_dssp             ECCCCCCS-----------H-------HHHHHHH----HHHHHHHHHTTCCEEEEEEESCCSTT----CCSTTHHHHH--
T ss_pred             EeCCCCcc-----------c-------hhhHHHH----HHHHHHHHHcCCCEEEEEcccCCCCC----CCCccchhHH--
Confidence            99986421           0       1244444    44455555567789999999654322    2344333221  


Q ss_pred             HHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCC----CCCCH
Q 021960          192 LTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKG----TTLRS  267 (305)
Q Consensus       192 ~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~  267 (305)
                         .+...+...|++++.++||++.+++....                        ...... .....+.+    .++.+
T Consensus       123 ---~~e~~~~~~g~~~~ilrp~~~~~~~~~~~------------------------~~~~~~-~~~~~~~g~~~~~~i~~  174 (289)
T 3e48_A          123 ---YASRLLSTSGIDYTYVRMAMYMDPLKPYL------------------------PELMNM-HKLIYPAGDGRINYITR  174 (289)
T ss_dssp             ---HHHHHHHHHCCEEEEEEECEESTTHHHHH------------------------HHHHHH-TEECCCCTTCEEEEECH
T ss_pred             ---HHHHHHHHcCCCEEEEeccccccccHHHH------------------------HHHHHC-CCEecCCCCceeeeEEH
Confidence               22233334689999999999988753110                        001000 00111222    26789


Q ss_pred             HHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          268 KDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       268 ~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      +|+|+.+++++++...+  |+++++. |...
T Consensus       175 ~Dva~~~~~~l~~~~~~--g~~~~~~-~~~~  202 (289)
T 3e48_A          175 NDIARGVIAIIKNPDTW--GKRYLLS-GYSY  202 (289)
T ss_dssp             HHHHHHHHHHHHCGGGT--TCEEEEC-CEEE
T ss_pred             HHHHHHHHHHHcCCCcC--CceEEeC-CCcC
Confidence            99999999999876433  9999999 7543

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.76  E-value=9.8e-18  Score=152.38  Aligned_cols=215  Identities=13%  Similarity=0.077  Sum_probs=139.4

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEec-CCCHHHHHHHHHHHHHhcCCcc
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCD-VSLEEDIENLINSTVSRYGRLD  108 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D-~~d~~~i~~~~~~~~~~~g~id  108 (305)
                      .++++|||||||+||+++++.|+++|++|+++.|+...... ........+.++.+| ++|.+++.++++       .+|
T Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~-~~l~~~~~v~~v~~D~l~d~~~l~~~~~-------~~d   75 (352)
T 1xgk_A            4 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIA-EELQAIPNVTLFQGPLLNNVPLMDTLFE-------GAH   75 (352)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHH-HHHHTSTTEEEEESCCTTCHHHHHHHHT-------TCS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhH-HHHhhcCCcEEEECCccCCHHHHHHHHh-------cCC
Confidence            46789999999999999999999999999999987654311 111122358889999 999999888764       589


Q ss_pred             EEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-CCEEEEecccc-cccCCCCCccchhhH
Q 021960          109 ILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRG-GGCIISTASVA-GVMGGLGPHAYTASK  186 (305)
Q Consensus       109 ~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~-~~~~~~~~~~Y~~sK  186 (305)
                      +||||++....                   ..|..+ .+    +++.+.+.+ .++||++||.. ...+.+....|+.+|
T Consensus        76 ~Vi~~a~~~~~-------------------~~~~~~-~~----l~~aa~~~g~v~~~V~~SS~~~~~~~~~~~~~y~~sK  131 (352)
T 1xgk_A           76 LAFINTTSQAG-------------------DEIAIG-KD----LADAAKRAGTIQHYIYSSMPDHSLYGPWPAVPMWAPK  131 (352)
T ss_dssp             EEEECCCSTTS-------------------CHHHHH-HH----HHHHHHHHSCCSEEEEEECCCGGGTSSCCCCTTTHHH
T ss_pred             EEEEcCCCCCc-------------------HHHHHH-HH----HHHHHHHcCCccEEEEeCCccccccCCCCCccHHHHH
Confidence            99999875310                   123333 33    334444455 67999999986 344445567899999


Q ss_pred             HHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCC
Q 021960          187 HAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLR  266 (305)
Q Consensus       187 aa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (305)
                      .+.+.+++.       .+++++.|+||++.+........................+..             ......++.
T Consensus       132 ~~~E~~~~~-------~gi~~~ivrpg~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~-------------~~~~~~~i~  191 (352)
T 1xgk_A          132 FTVENYVRQ-------LGLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWHAPFD-------------PDIPLPWLD  191 (352)
T ss_dssp             HHHHHHHHT-------SSSCEEEEEECEEGGGCBSSSCSSCBEEECTTSCEEEEESSC-------------TTSCEEEEC
T ss_pred             HHHHHHHHH-------cCCCEEEEecceecCCchhcccccccccccCCCceEEeeccC-------------CCCceeeEe
Confidence            999998865       279999999998765542211000000000000000000000             011123567


Q ss_pred             H-HHHHHHHHHhccCCCCceeccEEEecCCc
Q 021960          267 S-KDIAEAALYLASDESRYVSGHNLVVDGGV  296 (305)
Q Consensus       267 ~-~dva~~v~~l~s~~~~~~tG~~i~idgG~  296 (305)
                      + +|+|+++..++.+......|+++++.++.
T Consensus       192 v~~Dva~ai~~~l~~~~~~~~g~~~~l~~~~  222 (352)
T 1xgk_A          192 AEHDVGPALLQIFKDGPQKWNGHRIALTFET  222 (352)
T ss_dssp             HHHHHHHHHHHHHHHCHHHHTTCEEEECSEE
T ss_pred             cHHHHHHHHHHHHhCCchhhCCeEEEEecCC
Confidence            7 89999999999764334568999988653

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.75  E-value=1.5e-17  Score=147.35  Aligned_cols=211  Identities=14%  Similarity=0.126  Sum_probs=138.7

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHcC-CeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 021960           31 GKVAIITGGARGIGEAAVRLFARHG-AKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDI  109 (305)
Q Consensus        31 ~k~vlVtGas~giG~~ia~~l~~~g-~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~  109 (305)
                      .|++|||||+|+||+++++.|+++| ++|++++|+.......  .+....+.++.+|++|.++++++++       .+|+
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~--~l~~~~~~~~~~D~~d~~~l~~~~~-------~~d~   75 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAK--ELRLQGAEVVQGDQDDQVIMELALN-------GAYA   75 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHH--HHHHTTCEEEECCTTCHHHHHHHHT-------TCSE
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHH--HHHHCCCEEEEecCCCHHHHHHHHh-------cCCE
Confidence            5799999999999999999999999 9999999986543211  1112347889999999999888765       5899


Q ss_pred             EEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEeccccccc--CCCCCccchhhHH
Q 021960          110 LYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVM--GGLGPHAYTASKH  187 (305)
Q Consensus       110 li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~--~~~~~~~Y~~sKa  187 (305)
                      |||++|....         ..       ...|+.+.    +.+++.+.+.+.++||++|+.....  .......|+.+|.
T Consensus        76 vi~~a~~~~~---------~~-------~~~~~~~~----~~~~~aa~~~gv~~iv~~S~~~~~~~~~~~~~~~y~~sK~  135 (299)
T 2wm3_A           76 TFIVTNYWES---------CS-------QEQEVKQG----KLLADLARRLGLHYVVYSGLENIKKLTAGRLAAAHFDGKG  135 (299)
T ss_dssp             EEECCCHHHH---------TC-------HHHHHHHH----HHHHHHHHHHTCSEEEECCCCCHHHHTTTSCCCHHHHHHH
T ss_pred             EEEeCCCCcc---------cc-------chHHHHHH----HHHHHHHHHcCCCEEEEEcCccccccCCCcccCchhhHHH
Confidence            9999985311         01       12344443    4444555556678999966644322  1122467999999


Q ss_pred             HHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCCH
Q 021960          188 AIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRS  267 (305)
Q Consensus       188 a~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (305)
                      +++.+++.       .|++++.++||++.+++............+   ......|.              +.....++.+
T Consensus       136 ~~e~~~~~-------~gi~~~ilrp~~~~~~~~~~~~~~~~~~g~---~~~~~~~~--------------~~~~~~~i~~  191 (299)
T 2wm3_A          136 EVEEYFRD-------IGVPMTSVRLPCYFENLLSHFLPQKAPDGK---SYLLSLPT--------------GDVPMDGMSV  191 (299)
T ss_dssp             HHHHHHHH-------HTCCEEEEECCEEGGGGGTTTCCEECTTSS---SEEECCCC--------------TTSCEEEECG
T ss_pred             HHHHHHHH-------CCCCEEEEeecHHhhhchhhcCCcccCCCC---EEEEEecC--------------CCCccceecH
Confidence            99988764       379999999999998864322111000000   00000110              1112245689


Q ss_pred             HHHHHHHHHhccCCCCceeccEEEecCC
Q 021960          268 KDIAEAALYLASDESRYVSGHNLVVDGG  295 (305)
Q Consensus       268 ~dva~~v~~l~s~~~~~~tG~~i~idgG  295 (305)
                      +|+|+.+..++.+... ..|+++.+.|.
T Consensus       192 ~Dva~~~~~~l~~~~~-~~g~~~~~~g~  218 (299)
T 2wm3_A          192 SDLGPVVLSLLKMPEK-YVGQNIGLSTC  218 (299)
T ss_dssp             GGHHHHHHHHHHSHHH-HTTCEEECCSE
T ss_pred             HHHHHHHHHHHcChhh-hCCeEEEeeec
Confidence            9999999999876422 36889998863

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=99.71  E-value=3.2e-16  Score=137.78  Aligned_cols=195  Identities=8%  Similarity=-0.062  Sum_probs=134.8

Q ss_pred             CEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEEE
Q 021960           32 KVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILY  111 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~li  111 (305)
                      +++||||| |+||+++++.|+++|++|++++|+......+..    ..+.++.+|++|.+            ...+|+||
T Consensus         6 ~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~D~~d~~------------~~~~d~vi   68 (286)
T 3ius_A            6 GTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA----SGAEPLLWPGEEPS------------LDGVTHLL   68 (286)
T ss_dssp             CEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH----TTEEEEESSSSCCC------------CTTCCEEE
T ss_pred             CcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh----CCCeEEEecccccc------------cCCCCEEE
Confidence            68999998 999999999999999999999998765544332    34899999999832            35799999


Q ss_pred             EcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHc--CCCCEEEEecccccccCC-----------CC
Q 021960          112 NNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMIN--RGGGCIISTASVAGVMGG-----------LG  178 (305)
Q Consensus       112 ~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~~~iv~isS~~~~~~~-----------~~  178 (305)
                      |+|+.....         ..  .              .+.++..+.+  .+..+||++||.+.+-..           ..
T Consensus        69 ~~a~~~~~~---------~~--~--------------~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~p  123 (286)
T 3ius_A           69 ISTAPDSGG---------DP--V--------------LAALGDQIAARAAQFRWVGYLSTTAVYGDHDGAWVDETTPLTP  123 (286)
T ss_dssp             ECCCCBTTB---------CH--H--------------HHHHHHHHHHTGGGCSEEEEEEEGGGGCCCTTCEECTTSCCCC
T ss_pred             ECCCccccc---------cH--H--------------HHHHHHHHHhhcCCceEEEEeecceecCCCCCCCcCCCCCCCC
Confidence            999965321         10  0              1233333333  455799999997654221           12


Q ss_pred             CccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcC
Q 021960          179 PHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLG  258 (305)
Q Consensus       179 ~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (305)
                      ...|+.+|.+.+.+++.+      .+++++.++||.+..+..... ....          .+.+..         ... .
T Consensus       124 ~~~Y~~sK~~~E~~~~~~------~~~~~~ilRp~~v~G~~~~~~-~~~~----------~~~~~~---------~~~-~  176 (286)
T 3ius_A          124 TAARGRWRVMAEQQWQAV------PNLPLHVFRLAGIYGPGRGPF-SKLG----------KGGIRR---------IIK-P  176 (286)
T ss_dssp             CSHHHHHHHHHHHHHHHS------TTCCEEEEEECEEEBTTBSSS-TTSS----------SSCCCE---------EEC-T
T ss_pred             CCHHHHHHHHHHHHHHhh------cCCCEEEEeccceECCCchHH-HHHh----------cCCccc---------cCC-C
Confidence            357999999999998776      589999999999988753211 0000          000000         000 1


Q ss_pred             CCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          259 NLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       259 ~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      .....++.++|+|+++++++....   .|+++++.+|...
T Consensus       177 ~~~~~~i~v~Dva~a~~~~~~~~~---~g~~~~i~~~~~~  213 (286)
T 3ius_A          177 GQVFSRIHVEDIAQVLAASMARPD---PGAVYNVCDDEPV  213 (286)
T ss_dssp             TCCBCEEEHHHHHHHHHHHHHSCC---TTCEEEECCSCCB
T ss_pred             CcccceEEHHHHHHHHHHHHhCCC---CCCEEEEeCCCCc
Confidence            123356788999999999998764   6899999888644

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.70  E-value=7.8e-17  Score=147.05  Aligned_cols=193  Identities=15%  Similarity=0.078  Sum_probs=136.6

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCC-eEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEEE
Q 021960           33 VAIITGGARGIGEAAVRLFARHGA-KVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILY  111 (305)
Q Consensus        33 ~vlVtGas~giG~~ia~~l~~~g~-~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~li  111 (305)
                      +||||||+|+||++++++|+++|+ +|+.++|+                       .|.++++++++       .+|+||
T Consensus         2 ~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~-----------------------~d~~~l~~~~~-------~~d~Vi   51 (369)
T 3st7_A            2 NIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ-----------------------TKEEELESALL-------KADFIV   51 (369)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT-----------------------CCHHHHHHHHH-------HCSEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC-----------------------CCHHHHHHHhc-------cCCEEE
Confidence            699999999999999999999998 66655443                       78888888776       489999


Q ss_pred             EcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCC-EEEEecccccccCCCCCccchhhHHHHH
Q 021960          112 NNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGG-CIISTASVAGVMGGLGPHAYTASKHAIV  190 (305)
Q Consensus       112 ~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~-~iv~isS~~~~~~~~~~~~Y~~sKaa~~  190 (305)
                      |+||.....            +.++.+++|+.++.++++++.    +.+.. ++|++||.....    ...|+.+|.+.+
T Consensus        52 h~a~~~~~~------------~~~~~~~~n~~~~~~l~~a~~----~~~~~~~~v~~Ss~~~~~----~~~Y~~sK~~~E  111 (369)
T 3st7_A           52 HLAGVNRPE------------HDKEFSLGNVSYLDHVLDILT----RNTKKPAILLSSSIQATQ----DNPYGESKLQGE  111 (369)
T ss_dssp             ECCCSBCTT------------CSTTCSSSCCBHHHHHHHHHT----TCSSCCEEEEEEEGGGGS----CSHHHHHHHHHH
T ss_pred             ECCcCCCCC------------CHHHHHHHHHHHHHHHHHHHH----HhCCCCeEEEeCchhhcC----CCCchHHHHHHH
Confidence            999975321            123345678888877776653    34443 899999987654    678999999999


Q ss_pred             HHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHH-HHHHHhhcC------CCCCC
Q 021960          191 GLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRK-MEEFVSGLG------NLKGT  263 (305)
Q Consensus       191 ~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~------~~~~~  263 (305)
                      .+++.++++.   ++++..+.|+.+..+.....+..                   .+.. .........      .....
T Consensus       112 ~~~~~~~~~~---g~~~~i~R~~~v~G~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~  169 (369)
T 3st7_A          112 QLLREYAEEY---GNTVYIYRWPNLFGKWCKPNYNS-------------------VIATFCYKIARNEEIQVNDRNVELT  169 (369)
T ss_dssp             HHHHHHHHHH---CCCEEEEEECEEECTTCCTTSSC-------------------HHHHHHHHHHTTCCCCCSCTTCEEE
T ss_pred             HHHHHHHHHh---CCCEEEEECCceeCCCCCCCcch-------------------HHHHHHHHHHcCCCeEecCCCeEEE
Confidence            9999998874   78999999999987642211000                   0001 111111111      11123


Q ss_pred             CCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          264 TLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       264 ~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      ++.++|+|++++.++..... ..|+++++.+|...
T Consensus       170 ~i~v~Dva~~~~~~l~~~~~-~~~~~~~i~~~~~~  203 (369)
T 3st7_A          170 LNYVDDIVAEIKRAIEGTPT-IENGVPTVPNVFKV  203 (369)
T ss_dssp             EEEHHHHHHHHHHHHHTCCC-EETTEECCSCCEEE
T ss_pred             EEEHHHHHHHHHHHHhCCcc-cCCceEEeCCCCce
Confidence            56799999999999987642 24899999887543

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.69  E-value=3.9e-16  Score=138.50  Aligned_cols=201  Identities=17%  Similarity=0.190  Sum_probs=128.4

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCc-------chhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHh
Q 021960           31 GKVAIITGGARGIGEAAVRLFARHGAKVVIADVED-------TLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSR  103 (305)
Q Consensus        31 ~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~-------~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~  103 (305)
                      +++++||||+|+||+++++.|+++|++|+++.|+.       ...+.+.. +....+.++.+|++|.+++.++++     
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~-l~~~~v~~v~~D~~d~~~l~~~~~-----   75 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDN-YQSLGVILLEGDINDHETLVKAIK-----   75 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHH-HHHTTCEEEECCTTCHHHHHHHHT-----
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHH-HHhCCCEEEEeCCCCHHHHHHHHh-----
Confidence            46799999999999999999999999999999976       22222211 112347889999999998887775     


Q ss_pred             cCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-CCEEEEeccccccc------CC
Q 021960          104 YGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRG-GGCIISTASVAGVM------GG  176 (305)
Q Consensus       104 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~------~~  176 (305)
                        .+|+|||++|...                       +.+...++++    +.+.+ ..+||.  |..+..      ..
T Consensus        76 --~~d~vi~~a~~~~-----------------------~~~~~~l~~a----a~~~g~v~~~v~--S~~g~~~~~~~~~~  124 (307)
T 2gas_A           76 --QVDIVICAAGRLL-----------------------IEDQVKIIKA----IKEAGNVKKFFP--SEFGLDVDRHDAVE  124 (307)
T ss_dssp             --TCSEEEECSSSSC-----------------------GGGHHHHHHH----HHHHCCCSEEEC--SCCSSCTTSCCCCT
T ss_pred             --CCCEEEECCcccc-----------------------cccHHHHHHH----HHhcCCceEEee--cccccCcccccCCC
Confidence              5999999998631                       2222333333    33445 567773  433321      12


Q ss_pred             CCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhh
Q 021960          177 LGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSG  256 (305)
Q Consensus       177 ~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (305)
                      +....| .+|.+++.+++.       .+++++.++||++.+++....................                .
T Consensus       125 p~~~~y-~sK~~~e~~~~~-------~~i~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~  180 (307)
T 2gas_A          125 PVRQVF-EEKASIRRVIEA-------EGVPYTYLCCHAFTGYFLRNLAQLDATDPPRDKVVIL----------------G  180 (307)
T ss_dssp             THHHHH-HHHHHHHHHHHH-------HTCCBEEEECCEETTTTGGGTTCTTCSSCCSSEEEEE----------------T
T ss_pred             cchhHH-HHHHHHHHHHHH-------cCCCeEEEEcceeeccccccccccccccCCCCeEEEe----------------c
Confidence            234578 999999887752       3799999999999887643322110000000000000                0


Q ss_pred             cCCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecC
Q 021960          257 LGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDG  294 (305)
Q Consensus       257 ~~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idg  294 (305)
                      -+.....+..++|+|+++..++++..  ..|+.+.+.|
T Consensus       181 ~~~~~~~~i~~~Dva~~~~~~l~~~~--~~~~~~~~~~  216 (307)
T 2gas_A          181 DGNVKGAYVTEADVGTFTIRAANDPN--TLNKAVHIRL  216 (307)
T ss_dssp             TSCSEEEEECHHHHHHHHHHHHTCGG--GTTEEEECCC
T ss_pred             CCCcceEEeeHHHHHHHHHHHHcCcc--ccCceEEEeC
Confidence            01122346789999999999998653  2377777764

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.66  E-value=2e-15  Score=136.47  Aligned_cols=206  Identities=16%  Similarity=0.112  Sum_probs=133.7

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcc----hhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           29 LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDT----LGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        29 l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~----~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      |+.++||||||||+||+++++.|+++|++|+++.|+..    ....+. .+....+.++.+|++|.+++.+++++.    
T Consensus         8 M~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~-~l~~~~v~~~~~Dl~d~~~l~~~~~~~----   82 (346)
T 3i6i_A            8 SPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFK-ALEDKGAIIVYGLINEQEAMEKILKEH----   82 (346)
T ss_dssp             ---CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHH-HHHHTTCEEEECCTTCHHHHHHHHHHT----
T ss_pred             CCCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHH-HHHhCCcEEEEeecCCHHHHHHHHhhC----
Confidence            44678999999999999999999999999999999762    222111 122345889999999999998887653    


Q ss_pred             CCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-CCEEEEeccccccc----CCCCC
Q 021960          105 GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRG-GGCIISTASVAGVM----GGLGP  179 (305)
Q Consensus       105 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~----~~~~~  179 (305)
                       .+|+|||++|.                       .|+.++.++++++..    .+ ..+||+ |+.....    +.+..
T Consensus        83 -~~d~Vi~~a~~-----------------------~n~~~~~~l~~aa~~----~g~v~~~v~-S~~g~~~~e~~~~~p~  133 (346)
T 3i6i_A           83 -EIDIVVSTVGG-----------------------ESILDQIALVKAMKA----VGTIKRFLP-SEFGHDVNRADPVEPG  133 (346)
T ss_dssp             -TCCEEEECCCG-----------------------GGGGGHHHHHHHHHH----HCCCSEEEC-SCCSSCTTTCCCCTTH
T ss_pred             -CCCEEEECCch-----------------------hhHHHHHHHHHHHHH----cCCceEEee-cccCCCCCccCcCCCc
Confidence             69999999985                       166666666666544    44 456765 4432211    12345


Q ss_pred             ccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCC
Q 021960          180 HAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGN  259 (305)
Q Consensus       180 ~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (305)
                      ..|+.+|.+.+.+++.       .++.+..++||.+...+...............   ...+             -.-+.
T Consensus       134 ~~y~~sK~~~e~~l~~-------~g~~~tivrpg~~~g~~~~~~~~~~~~~~~~~---~~~~-------------~g~g~  190 (346)
T 3i6i_A          134 LNMYREKRRVRQLVEE-------SGIPFTYICCNSIASWPYYNNIHPSEVLPPTD---FFQI-------------YGDGN  190 (346)
T ss_dssp             HHHHHHHHHHHHHHHH-------TTCCBEEEECCEESSCCCSCC-----CCCCSS---CEEE-------------ETTSC
T ss_pred             chHHHHHHHHHHHHHH-------cCCCEEEEEecccccccCccccccccccCCCc---eEEE-------------ccCCC
Confidence            6899999998887754       47999999999987754322111000000000   0000             00012


Q ss_pred             CCCCCCCHHHHHHHHHHhccCCCCceeccEEEec
Q 021960          260 LKGTTLRSKDIAEAALYLASDESRYVSGHNLVVD  293 (305)
Q Consensus       260 ~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~id  293 (305)
                      ....++.++|+|++++.++.+..  ..|+++.+-
T Consensus       191 ~~~~~i~~~Dva~~~~~~l~~~~--~~~~~~~i~  222 (346)
T 3i6i_A          191 VKAYFVAGTDIGKFTMKTVDDVR--TLNKSVHFR  222 (346)
T ss_dssp             CCEEEECHHHHHHHHHHHTTCGG--GTTEEEECC
T ss_pred             ceEEecCHHHHHHHHHHHHhCcc--ccCeEEEEe
Confidence            23456789999999999998752  236667765

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.66  E-value=2.6e-16  Score=140.65  Aligned_cols=201  Identities=15%  Similarity=0.121  Sum_probs=127.3

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCc-c-----hhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           31 GKVAIITGGARGIGEAAVRLFARHGAKVVIADVED-T-----LGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        31 ~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~-~-----~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      .++++||||+|+||+++++.|+++|++|++++|+. .     ..+.+.. +....+.++.+|++|.+++.++++      
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~-~~~~~v~~v~~D~~d~~~l~~a~~------   76 (321)
T 3c1o_A            4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREE-FRSMGVTIIEGEMEEHEKMVSVLK------   76 (321)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHH-HHHTTCEEEECCTTCHHHHHHHHT------
T ss_pred             ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHH-hhcCCcEEEEecCCCHHHHHHHHc------
Confidence            36799999999999999999999999999999975 1     1111111 112348899999999999888775      


Q ss_pred             CCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-CCEEEEecccccccC------CC
Q 021960          105 GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRG-GGCIISTASVAGVMG------GL  177 (305)
Q Consensus       105 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~------~~  177 (305)
                       .+|+|||++|...                       +.+.    +.+++.+.+.+ ..+||  .|..+...      .+
T Consensus        77 -~~d~vi~~a~~~~-----------------------~~~~----~~l~~aa~~~g~v~~~v--~S~~g~~~~~~~~~~p  126 (321)
T 3c1o_A           77 -QVDIVISALPFPM-----------------------ISSQ----IHIINAIKAAGNIKRFL--PSDFGCEEDRIKPLPP  126 (321)
T ss_dssp             -TCSEEEECCCGGG-----------------------SGGG----HHHHHHHHHHCCCCEEE--CSCCSSCGGGCCCCHH
T ss_pred             -CCCEEEECCCccc-----------------------hhhH----HHHHHHHHHhCCccEEe--ccccccCccccccCCC
Confidence             5899999998531                       2222    33334444455 56777  34333211      11


Q ss_pred             CCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhc
Q 021960          178 GPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGL  257 (305)
Q Consensus       178 ~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (305)
                      ....| .+|.+++.+++.       .++.++.|+||++.+++....................                ..
T Consensus       127 ~~~~y-~sK~~~e~~~~~-------~~~~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~  182 (321)
T 3c1o_A          127 FESVL-EKKRIIRRAIEA-------AALPYTYVSANCFGAYFVNYLLHPSPHPNRNDDIVIY----------------GT  182 (321)
T ss_dssp             HHHHH-HHHHHHHHHHHH-------HTCCBEEEECCEEHHHHHHHHHCCCSSCCTTSCEEEE----------------TT
T ss_pred             cchHH-HHHHHHHHHHHH-------cCCCeEEEEeceeccccccccccccccccccCceEEe----------------cC
Confidence            24578 999999988752       3688888999998776533221110000000000000                00


Q ss_pred             CCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecC
Q 021960          258 GNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDG  294 (305)
Q Consensus       258 ~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idg  294 (305)
                      +.....++.++|+|+++..++++..  ..|+++.+.|
T Consensus       183 ~~~~~~~i~~~Dva~~~~~~l~~~~--~~g~~~~~~g  217 (321)
T 3c1o_A          183 GETKFVLNYEEDIAKYTIKVACDPR--CCNRIVIYRP  217 (321)
T ss_dssp             SCCEEEEECHHHHHHHHHHHHHCGG--GTTEEEECCC
T ss_pred             CCcceeEeeHHHHHHHHHHHHhCcc--ccCeEEEEeC
Confidence            1222346789999999999998653  2478888775

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=99.65  E-value=3.7e-15  Score=135.21  Aligned_cols=220  Identities=12%  Similarity=0.016  Sum_probs=139.9

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHcC-----CeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcC
Q 021960           31 GKVAIITGGARGIGEAAVRLFARHG-----AKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYG  105 (305)
Q Consensus        31 ~k~vlVtGas~giG~~ia~~l~~~g-----~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g  105 (305)
                      ++++|||||+|+||++++++|+++|     ++|++++|+.....     ....++.++.+|++|.+++.++++..    +
T Consensus         1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~-----~~~~~~~~~~~Dl~d~~~~~~~~~~~----~   71 (364)
T 2v6g_A            1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW-----HEDNPINYVQCDISDPDDSQAKLSPL----T   71 (364)
T ss_dssp             CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC-----CCSSCCEEEECCTTSHHHHHHHHTTC----T
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc-----cccCceEEEEeecCCHHHHHHHHhcC----C
Confidence            4689999999999999999999999     99999998765432     12345889999999998888776532    2


Q ss_pred             CccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEE-------EecccccccCC--
Q 021960          106 RLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCII-------STASVAGVMGG--  176 (305)
Q Consensus       106 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv-------~isS~~~~~~~--  176 (305)
                      ++|+|||+||...             ++.++.+++|+.++.++++++.+..  .+..++|       ++||.+.+-..  
T Consensus        72 ~~d~vih~a~~~~-------------~~~~~~~~~n~~~~~~l~~a~~~~~--~~~~~~v~~~g~~i~~Ss~~vyg~~~~  136 (364)
T 2v6g_A           72 DVTHVFYVTWANR-------------STEQENCEANSKMFRNVLDAVIPNC--PNLKHISLQTGRKHYMGPFESYGKIES  136 (364)
T ss_dssp             TCCEEEECCCCCC-------------SSHHHHHHHHHHHHHHHHHHHTTTC--TTCCEEEEECCTHHHHCCGGGTTTSCC
T ss_pred             CCCEEEECCCCCc-------------chHHHHHHHhHHHHHHHHHHHHHhc--cccceEEeccCceEEEechhhcccccc
Confidence            4999999999641             1356788999999988888775421  1345776       67876543111  


Q ss_pred             ------------CCCccchhhHHHHHHHHHHHHHHHCcCC-cEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCc
Q 021960          177 ------------LGPHAYTASKHAIVGLTKNAACELGRYG-IRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPS  243 (305)
Q Consensus       177 ------------~~~~~Y~~sKaa~~~~~~~la~e~~~~~-i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (305)
                                  +....|.    +.+.+++.++.   ..+ +++..++|+.+..+........      .        ..
T Consensus       137 ~~~~~~E~~~~~~~~~~y~----~~E~~~~~~~~---~~~~~~~~ilRp~~v~G~~~~~~~~~------~--------~~  195 (364)
T 2v6g_A          137 HDPPYTEDLPRLKYMNFYY----DLEDIMLEEVE---KKEGLTWSVHRPGNIFGFSPYSMMNL------V--------GT  195 (364)
T ss_dssp             CCSSBCTTSCCCSSCCHHH----HHHHHHHHHHT---TSTTCEEEEEEESSEECCCTTCSSCH------H--------HH
T ss_pred             CCCCCCccccCCccchhhH----HHHHHHHHHhh---cCCCceEEEECCCceeCCCCCcccch------H--------HH
Confidence                        1123462    34555544443   245 9999999999987643210000      0        00


Q ss_pred             HHHHHHHH-HHHhhcCCC--------CCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCcc
Q 021960          244 QKEVRKME-EFVSGLGNL--------KGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT  297 (305)
Q Consensus       244 ~~~~~~~~-~~~~~~~~~--------~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~  297 (305)
                      ....+.+. .....+..+        .-...+.+|+|++++.++....  ..|+++++.+|..
T Consensus       196 ~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~v~Dva~a~~~~~~~~~--~~g~~~ni~~~~~  256 (364)
T 2v6g_A          196 LCVYAAICKHEGKVLRFTGCKAAWDGYSDCSDADLIAEHHIWAAVDPY--AKNEAFNVSNGDV  256 (364)
T ss_dssp             HHHHHHHHHHHTCCBCCCSCHHHHHSCBCCEEHHHHHHHHHHHHHCGG--GTTEEEEECCSCC
T ss_pred             HHHHHHHHHhcCCceecCCCcccccccCCCCcHHHHHHHHHHHHhCCC--CCCceEEecCCCc
Confidence            00001110 000000000        1123456899999999987542  3689999988853

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.65  E-value=2.6e-15  Score=133.58  Aligned_cols=206  Identities=11%  Similarity=0.076  Sum_probs=130.3

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcch-----hhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcC
Q 021960           31 GKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTL-----GSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYG  105 (305)
Q Consensus        31 ~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~-----~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g  105 (305)
                      .++++||||||+||+++++.|+++|++|+++.|+...     .+.+. .+....+.++.+|++|.+++.++++       
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~-~~~~~~~~~~~~D~~d~~~l~~~~~-------   75 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLL-YFKQLGAKLIEASLDDHQRLVDALK-------   75 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHH-HHHTTTCEEECCCSSCHHHHHHHHT-------
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHH-HHHhCCeEEEeCCCCCHHHHHHHHh-------
Confidence            4679999999999999999999999999999997432     11111 1123458899999999998887765       


Q ss_pred             CccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-CCEEEEecccccccC------CCC
Q 021960          106 RLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRG-GGCIISTASVAGVMG------GLG  178 (305)
Q Consensus       106 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~------~~~  178 (305)
                      .+|+|||++|.....                   .|+.+..+++++    +.+.+ ..+||+ |+......      .+.
T Consensus        76 ~~d~vi~~a~~~~~~-------------------~~~~~~~~l~~a----a~~~g~v~~~v~-S~~g~~~~~~~~~~~p~  131 (313)
T 1qyd_A           76 QVDVVISALAGGVLS-------------------HHILEQLKLVEA----IKEAGNIKRFLP-SEFGMDPDIMEHALQPG  131 (313)
T ss_dssp             TCSEEEECCCCSSSS-------------------TTTTTHHHHHHH----HHHSCCCSEEEC-SCCSSCTTSCCCCCSST
T ss_pred             CCCEEEECCccccch-------------------hhHHHHHHHHHH----HHhcCCCceEEe-cCCcCCccccccCCCCC
Confidence            599999999964220                   144444444444    34455 578874 43221111      133


Q ss_pred             CccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCC-CCchhhhhhccCCCcHHHHHHHHHHHhhc
Q 021960          179 PHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSG-DGEEEDECMNFGIPSQKEVRKMEEFVSGL  257 (305)
Q Consensus       179 ~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (305)
                      ...| .+|.+++.+++       ..++.++.++||++.+++......... .....   .......             -
T Consensus       132 ~~~y-~sK~~~e~~~~-------~~g~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-------------~  187 (313)
T 1qyd_A          132 SITF-IDKRKVRRAIE-------AASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPR---DKVLIYG-------------D  187 (313)
T ss_dssp             THHH-HHHHHHHHHHH-------HTTCCBCEEECCEEHHHHTTTSSCTTCCSSCCS---SEECCBT-------------T
T ss_pred             cchH-HHHHHHHHHHH-------hcCCCeEEEEeceeccccccccccccccccCCC---CeEEEeC-------------C
Confidence            4568 99999988775       247888999999987765332211100 00000   0000000             0


Q ss_pred             CCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecC
Q 021960          258 GNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDG  294 (305)
Q Consensus       258 ~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idg  294 (305)
                      +.....+..++|+|+++..++.+..  ..|+.+.+.|
T Consensus       188 g~~~~~~i~~~Dva~~~~~~l~~~~--~~~~~~~~~g  222 (313)
T 1qyd_A          188 GNVKGIWVDEDDVGTYTIKSIDDPQ--TLNKTMYIRP  222 (313)
T ss_dssp             SCSEEEEECHHHHHHHHHHHTTCGG--GSSSEEECCC
T ss_pred             CCceEEEEEHHHHHHHHHHHHhCcc--cCCceEEEeC
Confidence            1122345789999999999997652  2367777665

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.62  E-value=1.9e-15  Score=134.98  Aligned_cols=197  Identities=15%  Similarity=0.140  Sum_probs=124.8

Q ss_pred             CEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcc-hhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEE
Q 021960           32 KVAIITGGARGIGEAAVRLFARHGAKVVIADVEDT-LGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDIL  110 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~-~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~l  110 (305)
                      +++|||||+|+||+++++.|+++|++|+++.|+.. ....+.. +....+.++.+|++|.+++.++++       .+|+|
T Consensus        12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~-l~~~~v~~v~~Dl~d~~~l~~a~~-------~~d~v   83 (318)
T 2r6j_A           12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDE-FQSLGAIIVKGELDEHEKLVELMK-------KVDVV   83 (318)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHH-HHHTTCEEEECCTTCHHHHHHHHT-------TCSEE
T ss_pred             CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHH-hhcCCCEEEEecCCCHHHHHHHHc-------CCCEE
Confidence            57999999999999999999999999999999864 2222211 112348889999999998888775       59999


Q ss_pred             EEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-CCEEEEecccccccC------CCCCccch
Q 021960          111 YNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRG-GGCIISTASVAGVMG------GLGPHAYT  183 (305)
Q Consensus       111 i~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~------~~~~~~Y~  183 (305)
                      ||+++...                       +.+.    +.+++.+.+.+ ..+||+ |+ .+...      .+....| 
T Consensus        84 i~~a~~~~-----------------------~~~~----~~l~~aa~~~g~v~~~v~-S~-~g~~~~~~~~~~p~~~~y-  133 (318)
T 2r6j_A           84 ISALAFPQ-----------------------ILDQ----FKILEAIKVAGNIKRFLP-SD-FGVEEDRINALPPFEALI-  133 (318)
T ss_dssp             EECCCGGG-----------------------STTH----HHHHHHHHHHCCCCEEEC-SC-CSSCTTTCCCCHHHHHHH-
T ss_pred             EECCchhh-----------------------hHHH----HHHHHHHHhcCCCCEEEe-ec-cccCcccccCCCCcchhH-
Confidence            99998521                       1222    23333344445 567774 43 33111      1123468 


Q ss_pred             hhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCC
Q 021960          184 ASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGT  263 (305)
Q Consensus       184 ~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (305)
                      .+|.+++.+++.       .++.+..++||++...+.............   ....                .-+.....
T Consensus       134 ~sK~~~e~~~~~-------~~~~~~~lr~~~~~~~~~~~~~~~~~~~~~---~~~~----------------~~~~~~~~  187 (318)
T 2r6j_A          134 ERKRMIRRAIEE-------ANIPYTYVSANCFASYFINYLLRPYDPKDE---ITVY----------------GTGEAKFA  187 (318)
T ss_dssp             HHHHHHHHHHHH-------TTCCBEEEECCEEHHHHHHHHHCTTCCCSE---EEEE----------------TTSCCEEE
T ss_pred             HHHHHHHHHHHh-------cCCCeEEEEcceehhhhhhhhccccCCCCc---eEEe----------------cCCCceee
Confidence            999998887753       478889999998876543222111000000   0000                00112234


Q ss_pred             CCCHHHHHHHHHHhccCCCCceeccEEEecC
Q 021960          264 TLRSKDIAEAALYLASDESRYVSGHNLVVDG  294 (305)
Q Consensus       264 ~~~~~dva~~v~~l~s~~~~~~tG~~i~idg  294 (305)
                      ++.++|+|+++..++.+...  .|+.+.+.|
T Consensus       188 ~i~~~Dva~~~~~~l~~~~~--~~~~~~~~g  216 (318)
T 2r6j_A          188 MNYEQDIGLYTIKVATDPRA--LNRVVIYRP  216 (318)
T ss_dssp             EECHHHHHHHHHHHTTCGGG--TTEEEECCC
T ss_pred             EeeHHHHHHHHHHHhcCccc--cCeEEEecC
Confidence            57899999999999976432  366777654

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.62  E-value=2.8e-15  Score=133.05  Aligned_cols=203  Identities=14%  Similarity=0.165  Sum_probs=126.0

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchh-----hhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcC
Q 021960           31 GKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLG-----SVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYG  105 (305)
Q Consensus        31 ~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~-----~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g  105 (305)
                      .++++||||+|+||+++++.|+++|++|+++.|+....     ......+....+.++.+|++|.+++.++++       
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~-------   76 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVK-------   76 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHH-------
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHc-------
Confidence            46799999999999999999999999999999874321     111111223458899999999999888775       


Q ss_pred             CccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-CCEEEEecccccccC-----CCCC
Q 021960          106 RLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRG-GGCIISTASVAGVMG-----GLGP  179 (305)
Q Consensus       106 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~-----~~~~  179 (305)
                      .+|+|||+++...                       +.+...++    +.+.+.+ ..+||+ |+......     .+..
T Consensus        77 ~~d~vi~~a~~~~-----------------------~~~~~~l~----~aa~~~g~v~~~v~-S~~g~~~~~~~~~~p~~  128 (308)
T 1qyc_A           77 NVDVVISTVGSLQ-----------------------IESQVNII----KAIKEVGTVKRFFP-SEFGNDVDNVHAVEPAK  128 (308)
T ss_dssp             TCSEEEECCCGGG-----------------------SGGGHHHH----HHHHHHCCCSEEEC-SCCSSCTTSCCCCTTHH
T ss_pred             CCCEEEECCcchh-----------------------hhhHHHHH----HHHHhcCCCceEee-cccccCccccccCCcch
Confidence            5899999998531                       12222333    3334445 567773 44321111     1223


Q ss_pred             ccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCC
Q 021960          180 HAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGN  259 (305)
Q Consensus       180 ~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (305)
                      ..| .+|.+++.+++.       .++.++.++||++.+.+...............   ....+             .-+.
T Consensus       129 ~~y-~sK~~~e~~~~~-------~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-------------~~~~  184 (308)
T 1qyc_A          129 SVF-EVKAKVRRAIEA-------EGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRD---KVVIL-------------GDGN  184 (308)
T ss_dssp             HHH-HHHHHHHHHHHH-------HTCCBEEEECCEEHHHHTTTTTCTTCSSCCSS---EEEEE-------------TTSC
T ss_pred             hHH-HHHHHHHHHHHh-------cCCCeEEEEeceeccccccccccccccCCCCC---ceEEe-------------cCCC
Confidence            568 999998887753       36888899999987765322111100000000   00000             0011


Q ss_pred             CCCCCCCHHHHHHHHHHhccCCCCceeccEEEecC
Q 021960          260 LKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDG  294 (305)
Q Consensus       260 ~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idg  294 (305)
                      ....+..++|+|+++..++++..  ..|+.+.+.|
T Consensus       185 ~~~~~i~~~Dva~~~~~~l~~~~--~~~~~~~~~g  217 (308)
T 1qyc_A          185 ARVVFVKEEDIGTFTIKAVDDPR--TLNKTLYLRL  217 (308)
T ss_dssp             CEEEEECHHHHHHHHHTTSSCGG--GTTEEEECCC
T ss_pred             ceEEEecHHHHHHHHHHHHhCcc--ccCeEEEEeC
Confidence            22345689999999999987642  2367777764

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.61  E-value=1.1e-14  Score=138.75  Aligned_cols=208  Identities=14%  Similarity=-0.008  Sum_probs=136.0

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEE
Q 021960           31 GKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDIL  110 (305)
Q Consensus        31 ~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~l  110 (305)
                      +++||||||+|+||+++++.|+++|++|++++|+.....            .+.+|+.+.  .       .+....+|+|
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~~------------~v~~d~~~~--~-------~~~l~~~D~V  205 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKPG------------KRFWDPLNP--A-------SDLLDGADVL  205 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCTT------------CEECCTTSC--C-------TTTTTTCSEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCcc------------ceeecccch--h-------HHhcCCCCEE
Confidence            579999999999999999999999999999999865421            155677642  1       2223479999


Q ss_pred             EEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccC-----------CCCC
Q 021960          111 YNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMG-----------GLGP  179 (305)
Q Consensus       111 i~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~-----------~~~~  179 (305)
                      ||+||....       ...+.+..+..+++|+.++.++++.+.   .+.+..+||++||.+.+-.           ....
T Consensus       206 ih~A~~~~~-------~~~~~~~~~~~~~~Nv~gt~~ll~a~a---~~~~~~r~V~~SS~~vyg~~~~~~~~~E~~~~~~  275 (516)
T 3oh8_A          206 VHLAGEPIF-------GRFNDSHKEAIRESRVLPTKFLAELVA---ESTQCTTMISASAVGFYGHDRGDEILTEESESGD  275 (516)
T ss_dssp             EECCCC------------CCGGGHHHHHHHTHHHHHHHHHHHH---HCSSCCEEEEEEEGGGGCSEEEEEEECTTSCCCS
T ss_pred             EECCCCccc-------cccchhHHHHHHHHHHHHHHHHHHHHH---hcCCCCEEEEeCcceEecCCCCCCccCCCCCCCc
Confidence            999997422       123456678889999999988888643   2345679999999765430           1133


Q ss_pred             ccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHH---hh
Q 021960          180 HAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFV---SG  256 (305)
Q Consensus       180 ~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~  256 (305)
                      ..|+.+|...+.+.+.    ....|++++.+.||.+.++... .+.                   .....+....   -.
T Consensus       276 ~~y~~~~~~~E~~~~~----~~~~gi~~~ilRp~~v~Gp~~~-~~~-------------------~~~~~~~~g~~~~~g  331 (516)
T 3oh8_A          276 DFLAEVCRDWEHATAP----ASDAGKRVAFIRTGVALSGRGG-MLP-------------------LLKTLFSTGLGGKFG  331 (516)
T ss_dssp             SHHHHHHHHHHHTTHH----HHHTTCEEEEEEECEEEBTTBS-HHH-------------------HHHHTTC---CCCCT
T ss_pred             ChHHHHHHHHHHHHHH----HHhCCCCEEEEEeeEEECCCCC-hHH-------------------HHHHHHHhCCCcccC
Confidence            4678888877666443    2346899999999999886410 000                   0000000000   00


Q ss_pred             cCCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCc
Q 021960          257 LGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGV  296 (305)
Q Consensus       257 ~~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~  296 (305)
                      -+.....++.++|+|+++++++....  ..| .+++-+|.
T Consensus       332 ~g~~~~~~i~v~Dva~ai~~~l~~~~--~~g-~~ni~~~~  368 (516)
T 3oh8_A          332 DGTSWFSWIAIDDLTDIYYRAIVDAQ--ISG-PINAVAPN  368 (516)
T ss_dssp             TSCCEECEEEHHHHHHHHHHHHHCTT--CCE-EEEESCSC
T ss_pred             CCCceEceEeHHHHHHHHHHHHhCcc--cCC-cEEEECCC
Confidence            01122346789999999999997653  345 56666654

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=99.41  E-value=1e-11  Score=109.62  Aligned_cols=208  Identities=15%  Similarity=0.054  Sum_probs=124.3

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEEEE
Q 021960           33 VAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILYN  112 (305)
Q Consensus        33 ~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~li~  112 (305)
                      .||||||||.||+++++.|.++|++|+++.|+....          ++   ..|     .+      ..+....+|.+||
T Consensus         2 kILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~~----------~~---~~~-----~~------~~~~l~~~d~vih   57 (298)
T 4b4o_A            2 RVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGPG----------RI---TWD-----EL------AASGLPSCDAAVN   57 (298)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTT----------EE---EHH-----HH------HHHCCCSCSEEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCcC----------ee---ecc-----hh------hHhhccCCCEEEE
Confidence            589999999999999999999999999999875321          11   111     11      1122357999999


Q ss_pred             cCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCC-----------CCCcc
Q 021960          113 NAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGG-----------LGPHA  181 (305)
Q Consensus       113 nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~-----------~~~~~  181 (305)
                      .||....    ......+.+..+..++.|+.++.++.+.+...  ..+...+|+.||.+.+-+.           .....
T Consensus        58 la~~~i~----~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~--~~~~~~~i~~Ss~~vyg~~~~~~~~E~~p~~~~~~  131 (298)
T 4b4o_A           58 LAGENIL----NPLRRWNETFQKEVLGSRLETTQLLAKAITKA--PQPPKAWVLVTGVAYYQPSLTAEYDEDSPGGDFDF  131 (298)
T ss_dssp             CCCCCSS----CTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHC--SSCCSEEEEEEEGGGSCCCSSCCBCTTCCCSCSSH
T ss_pred             eccCccc----chhhhhhhhhhhhhhhHHHHHHHHHHHHHHHh--CCCceEEEEEeeeeeecCCCCCcccccCCccccch
Confidence            9985322    23334567777888899998887666655431  1234457777776544221           11223


Q ss_pred             chhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHh---hcC
Q 021960          182 YTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVS---GLG  258 (305)
Q Consensus       182 Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~  258 (305)
                      |+..|...+.     +......++++..+.||.+..+.....                    ............   +.+
T Consensus       132 ~~~~~~~~e~-----~~~~~~~~~~~~~~r~~~v~g~~~~~~--------------------~~~~~~~~~~~~~~~g~g  186 (298)
T 4b4o_A          132 FSNLVTKWEA-----AARLPGDSTRQVVVRSGVVLGRGGGAM--------------------GHMLLPFRLGLGGPIGSG  186 (298)
T ss_dssp             HHHHHHHHHH-----HHCCSSSSSEEEEEEECEEECTTSHHH--------------------HHHHHHHHTTCCCCBTTS
T ss_pred             hHHHHHHHHH-----HHHhhccCCceeeeeeeeEEcCCCCch--------------------hHHHHHHhcCCcceeccc
Confidence            4444443332     123346789999999999877631100                    000000000000   001


Q ss_pred             CCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          259 NLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       259 ~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      .....++..+|+++++.+++.++.  ..| ++++-++...
T Consensus       187 ~~~~~~ihv~Dva~a~~~~~~~~~--~~g-~yn~~~~~~~  223 (298)
T 4b4o_A          187 HQFFPWIHIGDLAGILTHALEANH--VHG-VLNGVAPSSA  223 (298)
T ss_dssp             CSBCCEEEHHHHHHHHHHHHHCTT--CCE-EEEESCSCCC
T ss_pred             CceeecCcHHHHHHHHHHHHhCCC--CCC-eEEEECCCcc
Confidence            223345678999999999987653  345 7777766543

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=99.16  E-value=3.8e-11  Score=107.74  Aligned_cols=163  Identities=13%  Similarity=0.063  Sum_probs=103.9

Q ss_pred             CEEEEecCCCchHHHHHHHHHHcCC-------eEEEEecCcc--hhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHH
Q 021960           32 KVAIITGGARGIGEAAVRLFARHGA-------KVVIADVEDT--LGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVS  102 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~g~-------~vv~~~r~~~--~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~  102 (305)
                      ++++||||+|+||.+++..|+++|+       .|+++++...  ........+....+.++ .|+.+.+++.+.+     
T Consensus         5 mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~~~-~di~~~~~~~~a~-----   78 (327)
T 1y7t_A            5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLL-AGLEATDDPKVAF-----   78 (327)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTE-EEEEEESCHHHHT-----
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhccccccc-CCeEeccChHHHh-----
Confidence            4799999999999999999999986       7999988642  11111111111111122 4555433333333     


Q ss_pred             hcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccc--------c
Q 021960          103 RYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGV--------M  174 (305)
Q Consensus       103 ~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~--------~  174 (305)
                        ...|+|||.||.....       ..+   ..+.++.|+.++..+++.+...-  ....+++++|+....        .
T Consensus        79 --~~~D~Vih~Ag~~~~~-------~~~---~~~~~~~Nv~~t~~l~~a~~~~~--~~~~~vvv~snp~~~~~~~~~~~~  144 (327)
T 1y7t_A           79 --KDADYALLVGAAPRKA-------GME---RRDLLQVNGKIFTEQGRALAEVA--KKDVKVLVVGNPANTNALIAYKNA  144 (327)
T ss_dssp             --TTCSEEEECCCCCCCT-------TCC---HHHHHHHHHHHHHHHHHHHHHHS--CTTCEEEECSSSHHHHHHHHHHTC
T ss_pred             --CCCCEEEECCCcCCCC-------CCC---HHHHHHHHHHHHHHHHHHHHhhc--CCCeEEEEeCCchhhhHHHHHHHc
Confidence              3689999999975321       122   34578999999888887776531  134588888875521        1


Q ss_pred             -CCCCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCcccc
Q 021960          175 -GGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVAT  217 (305)
Q Consensus       175 -~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T  217 (305)
                       +.+....|+.+|...+.+.+.+++.+   |+.+..|+|..+..
T Consensus       145 ~~~~p~~~yg~tkl~~er~~~~~a~~~---g~~~~~vr~~~V~G  185 (327)
T 1y7t_A          145 PGLNPRNFTAMTRLDHNRAKAQLAKKT---GTGVDRIRRMTVWG  185 (327)
T ss_dssp             TTSCGGGEEECCHHHHHHHHHHHHHHH---TCCGGGEECCEEEB
T ss_pred             CCCChhheeccchHHHHHHHHHHHHHh---CcChhheeeeEEEc
Confidence             23445679999999999999888775   44444455544433

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=99.10  E-value=9e-11  Score=103.34  Aligned_cols=83  Identities=16%  Similarity=0.276  Sum_probs=66.7

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCC-CCeEEEEecCCCHHHHHHHHHHHHHhcCC
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAP-APVTFVHCDVSLEEDIENLINSTVSRYGR  106 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~i~~~~~~~~~~~g~  106 (305)
                      ++++|++|||||+||||+++++.|+++|++|++++|+..+.+.+.+.+.. ..+.++.+|++|.++++++++       .
T Consensus       116 ~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~  188 (287)
T 1lu9_A          116 SVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVK-------G  188 (287)
T ss_dssp             CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTT-------T
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHH-------h
Confidence            46889999999999999999999999999999999987665544433311 135678899999988877664       4


Q ss_pred             ccEEEEcCCCC
Q 021960          107 LDILYNNAGVL  117 (305)
Q Consensus       107 id~li~nag~~  117 (305)
                      +|+||||+|..
T Consensus       189 ~DvlVn~ag~g  199 (287)
T 1lu9_A          189 AHFVFTAGAIG  199 (287)
T ss_dssp             CSEEEECCCTT
T ss_pred             CCEEEECCCcc
Confidence            89999999853

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=98.99  E-value=1.9e-09  Score=90.78  Aligned_cols=153  Identities=15%  Similarity=0.099  Sum_probs=90.7

Q ss_pred             CCCCCEEEEecC----------------CCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHH
Q 021960           28 RLEGKVAIITGG----------------ARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEE   91 (305)
Q Consensus        28 ~l~~k~vlVtGa----------------s~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~   91 (305)
                      +|+||+||||||                |||+|.++|+.|+++|++|+++++... ..     . ...+  ..+|+++. 
T Consensus         5 ~l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~-l~-----~-~~g~--~~~dv~~~-   74 (226)
T 1u7z_A            5 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS-LP-----T-PPFV--KRVDVMTA-   74 (226)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC-CC-----C-CTTE--EEEECCSH-
T ss_pred             CCCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcc-cc-----c-CCCC--eEEccCcH-
Confidence            578999999999                699999999999999999999877642 11     0 1113  34688775 


Q ss_pred             HHHHHHHHHHHhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHH--HHHHhHHHHHHHHHHHHHHHcC-CCCEEEEec
Q 021960           92 DIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNV--MRVNVKGMALGIKHAARVMINR-GGGCIISTA  168 (305)
Q Consensus        92 ~i~~~~~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~--~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~is  168 (305)
                        +++++.+.+.++++|++|||||....    .++ +...+.+.+.  -..++.-.+..+..+++.+.+. ..+.++ ++
T Consensus        75 --~~~~~~v~~~~~~~Dili~~Aav~d~----~p~-~~~~~KIkk~~~~~~~l~l~L~~~pdIL~~l~~~~~~~~~~-VG  146 (226)
T 1u7z_A           75 --LEMEAAVNASVQQQNIFIGCAAVADY----RAA-TVAPEKIKKQATQGDELTIKMVKNPDIVAGVAALKDHRPYV-VG  146 (226)
T ss_dssp             --HHHHHHHHHHGGGCSEEEECCBCCSE----EES-SCCSSCC-------CEEEEEEEECCCHHHHHHHCSSSCCEE-EE
T ss_pred             --HHHHHHHHHhcCCCCEEEECCcccCC----CCc-cCChHHhccccccCCceEEEEeecHHHHHHHHhhhcCCcEE-EE
Confidence              44666777788899999999997532    122 1222233330  0112222222233445555443 233332 12


Q ss_pred             ccccccCCCCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCc
Q 021960          169 SVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFG  214 (305)
Q Consensus       169 S~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~  214 (305)
                      -..          +.      +.+.+....++.++|+.+.+.+|-.
T Consensus       147 Faa----------Et------~~l~e~A~~kL~~k~~d~ivaN~~~  176 (226)
T 1u7z_A          147 FAA----------ET------NNVEEYARQKRIRKNLDLICANDVS  176 (226)
T ss_dssp             EEE----------ES------SSHHHHHHHHHHHHTCSEEEEEECS
T ss_pred             cch----------hh------chHHHHHHHHHHhcCCCEEEEeecc
Confidence            111          11      2356666677777788777777654

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=98.78  E-value=2e-08  Score=84.75  Aligned_cols=78  Identities=13%  Similarity=0.270  Sum_probs=58.5

Q ss_pred             CCCEEEEecC----------------CCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHH
Q 021960           30 EGKVAIITGG----------------ARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDI   93 (305)
Q Consensus        30 ~~k~vlVtGa----------------s~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i   93 (305)
                      +||+||||||                ||++|.++|+.|+++|+.|++++|......    . ....+..  .|+.   ++
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~----~-~~~~~~~--~~v~---s~   71 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKP----E-PHPNLSI--REIT---NT   71 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCC----C-CCTTEEE--EECC---SH
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccccc----c-CCCCeEE--EEHh---HH
Confidence            5899999999                888999999999999999999988653211    0 0112433  3444   55


Q ss_pred             HHHHHHHHHhcCCccEEEEcCCCC
Q 021960           94 ENLINSTVSRYGRLDILYNNAGVL  117 (305)
Q Consensus        94 ~~~~~~~~~~~g~id~li~nag~~  117 (305)
                      +++++.+.+.++.+|++|+|||..
T Consensus        72 ~em~~~v~~~~~~~Dili~aAAvs   95 (232)
T 2gk4_A           72 KDLLIEMQERVQDYQVLIHSMAVS   95 (232)
T ss_dssp             HHHHHHHHHHGGGCSEEEECSBCC
T ss_pred             HHHHHHHHHhcCCCCEEEEcCccc
Confidence            667777777788899999999975

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=98.77  E-value=3e-08  Score=74.48  Aligned_cols=75  Identities=19%  Similarity=0.182  Sum_probs=61.4

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcC-CeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHG-AKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLD  108 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g-~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id  108 (305)
                      .+++++|+|+ |++|.++++.|.++| ++|++++|+....+.+.    ...+.++.+|+++.+++.++++       .+|
T Consensus         4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~----~~~~~~~~~d~~~~~~~~~~~~-------~~d   71 (118)
T 3ic5_A            4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN----RMGVATKQVDAKDEAGLAKALG-------GFD   71 (118)
T ss_dssp             TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH----TTTCEEEECCTTCHHHHHHHTT-------TCS
T ss_pred             CcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH----hCCCcEEEecCCCHHHHHHHHc-------CCC
Confidence            3578999999 999999999999999 89999999876655443    2346778999999887777653       689


Q ss_pred             EEEEcCCC
Q 021960          109 ILYNNAGV  116 (305)
Q Consensus       109 ~li~nag~  116 (305)
                      +||++++.
T Consensus        72 ~vi~~~~~   79 (118)
T 3ic5_A           72 AVISAAPF   79 (118)
T ss_dssp             EEEECSCG
T ss_pred             EEEECCCc
Confidence            99999863

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=98.56  E-value=9.3e-08  Score=76.29  Aligned_cols=75  Identities=20%  Similarity=0.222  Sum_probs=59.5

Q ss_pred             CchHHHHHHHHHHcCCeEEEEecCcchhhh---Hhhh--cCCCCeEEEEecCCCH--HHHHHHHHHHHHhcCCccEEEEc
Q 021960           41 RGIGEAAVRLFARHGAKVVIADVEDTLGSV---LAST--LAPAPVTFVHCDVSLE--EDIENLINSTVSRYGRLDILYNN  113 (305)
Q Consensus        41 ~giG~~ia~~l~~~g~~vv~~~r~~~~~~~---~~~~--~~~~~v~~~~~D~~d~--~~i~~~~~~~~~~~g~id~li~n  113 (305)
                      +-++.++++.|++.|++|++..|++.....   ..+.  ..+.++..+.+|+++.  ++++++++.+.+.+|+ |+||||
T Consensus        26 ~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~-dVLVnn  104 (157)
T 3gxh_A           26 GLPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQAGMDYVYIPVDWQNPKVEDVEAFFAAMDQHKGK-DVLVHC  104 (157)
T ss_dssp             BCCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHTTCEEEECCCCTTSCCHHHHHHHHHHHHHTTTS-CEEEEC
T ss_pred             CCCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHcCCeEEEecCCCCCCCHHHHHHHHHHHHhcCCC-CEEEEC
Confidence            357899999999999999998775443211   1111  1355678889999999  9999999999998999 999999


Q ss_pred             CCC
Q 021960          114 AGV  116 (305)
Q Consensus       114 ag~  116 (305)
                      ||.
T Consensus       105 Agg  107 (157)
T 3gxh_A          105 LAN  107 (157)
T ss_dssp             SBS
T ss_pred             CCC
Confidence            996

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.52  E-value=2.5e-07  Score=85.24  Aligned_cols=79  Identities=18%  Similarity=0.234  Sum_probs=66.2

Q ss_pred             CEEEEecCCCchHHHHHHHHHHcC---CeEEEEecCcchhhhHhhhcC---CCCeEEEEecCCCHHHHHHHHHHHHHhcC
Q 021960           32 KVAIITGGARGIGEAAVRLFARHG---AKVVIADVEDTLGSVLASTLA---PAPVTFVHCDVSLEEDIENLINSTVSRYG  105 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~g---~~vv~~~r~~~~~~~~~~~~~---~~~v~~~~~D~~d~~~i~~~~~~~~~~~g  105 (305)
                      ++++|+|| |+||+++++.|+++|   ..|++++|+..+.+.+.+.+.   +.++..+.+|++|.++++++++..     
T Consensus         2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~-----   75 (405)
T 4ina_A            2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEV-----   75 (405)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHH-----
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhh-----
Confidence            47899999 899999999999998   389999999877766655442   235888999999999999998865     


Q ss_pred             CccEEEEcCCC
Q 021960          106 RLDILYNNAGV  116 (305)
Q Consensus       106 ~id~li~nag~  116 (305)
                      ++|+||||++.
T Consensus        76 ~~DvVin~ag~   86 (405)
T 4ina_A           76 KPQIVLNIALP   86 (405)
T ss_dssp             CCSEEEECSCG
T ss_pred             CCCEEEECCCc
Confidence            69999999985

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.50  E-value=3.6e-07  Score=85.21  Aligned_cols=79  Identities=14%  Similarity=0.185  Sum_probs=61.9

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 021960           29 LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLD  108 (305)
Q Consensus        29 l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id  108 (305)
                      |++++++|+| +|++|+++++.|++.|++|++++|+....+.+.+...  .+..+.+|++|.++++++++       .+|
T Consensus         1 M~~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~~--~~~~~~~Dv~d~~~l~~~l~-------~~D   70 (450)
T 1ff9_A            1 MATKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQ--HSTPISLDVNDDAALDAEVA-------KHD   70 (450)
T ss_dssp             -CCCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTCT--TEEEEECCTTCHHHHHHHHT-------TSS
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhcC--CceEEEeecCCHHHHHHHHc-------CCc
Confidence            3578999998 7999999999999999999999998765544433221  36788899999988877663       699


Q ss_pred             EEEEcCCCC
Q 021960          109 ILYNNAGVL  117 (305)
Q Consensus       109 ~li~nag~~  117 (305)
                      +||||++..
T Consensus        71 vVIn~a~~~   79 (450)
T 1ff9_A           71 LVISLIPYT   79 (450)
T ss_dssp             EEEECCC--
T ss_pred             EEEECCccc
Confidence            999999853

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.46  E-value=2.8e-07  Score=76.03  Aligned_cols=79  Identities=20%  Similarity=0.246  Sum_probs=56.7

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDI  109 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~  109 (305)
                      .|+++|||||+||||.++++.+...|++|+++++++...+...+ . +..   ..+|.++.+..+.+.+...  .+.+|+
T Consensus        38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~-~-g~~---~~~d~~~~~~~~~~~~~~~--~~~~D~  110 (198)
T 1pqw_A           38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSR-L-GVE---YVGDSRSVDFADEILELTD--GYGVDV  110 (198)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHT-T-CCS---EEEETTCSTHHHHHHHHTT--TCCEEE
T ss_pred             CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-c-CCC---EEeeCCcHHHHHHHHHHhC--CCCCeE
Confidence            58999999999999999999999999999999998766554432 2 221   2357776544444333221  135999


Q ss_pred             EEEcCC
Q 021960          110 LYNNAG  115 (305)
Q Consensus       110 li~nag  115 (305)
                      +|+|+|
T Consensus       111 vi~~~g  116 (198)
T 1pqw_A          111 VLNSLA  116 (198)
T ss_dssp             EEECCC
T ss_pred             EEECCc
Confidence            999987

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=98.45  E-value=2.5e-07  Score=82.76  Aligned_cols=79  Identities=18%  Similarity=0.277  Sum_probs=59.1

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDI  109 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~  109 (305)
                      .|+++|||||+||||..+++.+...|++|+++++++.+.+.+ +.+...    ..+|.++.+++.+.+.++..  +.+|+
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~-~~~g~~----~~~d~~~~~~~~~~~~~~~~--~~~d~  217 (333)
T 1v3u_A          145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL-KQIGFD----AAFNYKTVNSLEEALKKASP--DGYDC  217 (333)
T ss_dssp             SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHTTCS----EEEETTSCSCHHHHHHHHCT--TCEEE
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HhcCCc----EEEecCCHHHHHHHHHHHhC--CCCeE
Confidence            589999999999999999999999999999999987766655 333221    23577764444444444432  47999


Q ss_pred             EEEcCC
Q 021960          110 LYNNAG  115 (305)
Q Consensus       110 li~nag  115 (305)
                      +|+|+|
T Consensus       218 vi~~~g  223 (333)
T 1v3u_A          218 YFDNVG  223 (333)
T ss_dssp             EEESSC
T ss_pred             EEECCC
Confidence            999998

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.40  E-value=5.6e-07  Score=81.84  Aligned_cols=107  Identities=22%  Similarity=0.294  Sum_probs=73.2

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRL  107 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~i  107 (305)
                      .+.+++++|+|+ |+||+.+++.+...|++|++++++..+.+.+.+.. +..   +.+|.++.++++++++       ..
T Consensus       163 ~l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~-g~~---~~~~~~~~~~l~~~~~-------~~  230 (369)
T 2eez_A          163 GVAPASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVF-GGR---VITLTATEANIKKSVQ-------HA  230 (369)
T ss_dssp             BBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT-TTS---EEEEECCHHHHHHHHH-------HC
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhc-Cce---EEEecCCHHHHHHHHh-------CC
Confidence            577899999999 99999999999999999999999877665554433 222   4567778877776653       58


Q ss_pred             cEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccc
Q 021960          108 DILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVA  171 (305)
Q Consensus       108 d~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~  171 (305)
                      |+||++++.....                       .+..+.+..++.|  ++++.||++++..
T Consensus       231 DvVi~~~g~~~~~-----------------------~~~li~~~~l~~m--k~gg~iV~v~~~~  269 (369)
T 2eez_A          231 DLLIGAVLVPGAK-----------------------APKLVTRDMLSLM--KEGAVIVDVAVDQ  269 (369)
T ss_dssp             SEEEECCC------------------------------CCSCHHHHTTS--CTTCEEEECC---
T ss_pred             CEEEECCCCCccc-----------------------cchhHHHHHHHhh--cCCCEEEEEecCC
Confidence            9999999853210                       0012234455656  4568899998754

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=98.39  E-value=1.6e-10  Score=107.49  Aligned_cols=42  Identities=21%  Similarity=0.502  Sum_probs=36.8

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhh
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGS   69 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~   69 (305)
                      ..+.||+++|||++ +||+++|+.|+..|++|++++++.....
T Consensus       261 ~~L~GKtVvVtGaG-gIG~aiA~~Laa~GA~Viv~D~~~~~a~  302 (488)
T 3ond_A          261 VMIAGKVAVVAGYG-DVGKGCAAALKQAGARVIVTEIDPICAL  302 (488)
T ss_dssp             CCCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCHHHHH
T ss_pred             CcccCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHH
Confidence            35789999999986 9999999999999999999998765443

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.30  E-value=1.9e-06  Score=80.52  Aligned_cols=81  Identities=15%  Similarity=0.187  Sum_probs=62.1

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHHc-CCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           26 HRRLEGKVAIITGGARGIGEAAVRLFARH-GAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        26 ~~~l~~k~vlVtGas~giG~~ia~~l~~~-g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      ...+++++++|+|+ |++|++++..|++. |++|++++|+..+.+.+.+.   ..+..+.+|+.|.+++.++++      
T Consensus        18 ~~~l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~---~~~~~~~~D~~d~~~l~~~l~------   87 (467)
T 2axq_A           18 EGRHMGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKP---SGSKAISLDVTDDSALDKVLA------   87 (467)
T ss_dssp             -----CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGG---GTCEEEECCTTCHHHHHHHHH------
T ss_pred             ccCCCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHh---cCCcEEEEecCCHHHHHHHHc------
Confidence            34667889999997 99999999999998 78999999987766555443   135667899999888877664      


Q ss_pred             CCccEEEEcCCCC
Q 021960          105 GRLDILYNNAGVL  117 (305)
Q Consensus       105 g~id~li~nag~~  117 (305)
                       .+|+|||+++..
T Consensus        88 -~~DvVIn~tp~~   99 (467)
T 2axq_A           88 -DNDVVISLIPYT   99 (467)
T ss_dssp             -TSSEEEECSCGG
T ss_pred             -CCCEEEECCchh
Confidence             589999999853

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=98.26  E-value=2e-06  Score=77.37  Aligned_cols=80  Identities=23%  Similarity=0.251  Sum_probs=60.1

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDI  109 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~  109 (305)
                      .|+++||+|++|+||..+++.+...|++|+++++++.+.+.+.+ +...    ..+|.++.+++.+.++++.+.  .+|+
T Consensus       169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~-~g~~----~~~d~~~~~~~~~~~~~~~~~--~~D~  241 (347)
T 2hcy_A          169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRS-IGGE----VFIDFTKEKDIVGAVLKATDG--GAHG  241 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHH-TTCC----EEEETTTCSCHHHHHHHHHTS--CEEE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHH-cCCc----eEEecCccHhHHHHHHHHhCC--CCCE
Confidence            58999999999999999999999999999999988776655443 3222    235877555555555554433  6999


Q ss_pred             EEEcCCC
Q 021960          110 LYNNAGV  116 (305)
Q Consensus       110 li~nag~  116 (305)
                      +|+|+|.
T Consensus       242 vi~~~g~  248 (347)
T 2hcy_A          242 VINVSVS  248 (347)
T ss_dssp             EEECSSC
T ss_pred             EEECCCc
Confidence            9999983

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.21  E-value=2.2e-06  Score=66.42  Aligned_cols=77  Identities=18%  Similarity=0.262  Sum_probs=56.2

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 021960           29 LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLD  108 (305)
Q Consensus        29 l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id  108 (305)
                      +++++++|+|+ |++|..+++.|.+.|++|+++++++...+.+.+    ....++..|.++.+.++++      .....|
T Consensus         4 ~~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~----~~~~~~~~d~~~~~~l~~~------~~~~~d   72 (144)
T 2hmt_A            4 IKNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYAS----YATHAVIANATEENELLSL------GIRNFE   72 (144)
T ss_dssp             --CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTT----TCSEEEECCTTCHHHHHTT------TGGGCS
T ss_pred             CcCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----hCCEEEEeCCCCHHHHHhc------CCCCCC
Confidence            45678999998 999999999999999999999987655443322    1245677899886655432      124689


Q ss_pred             EEEEcCCC
Q 021960          109 ILYNNAGV  116 (305)
Q Consensus       109 ~li~nag~  116 (305)
                      ++|++++.
T Consensus        73 ~vi~~~~~   80 (144)
T 2hmt_A           73 YVIVAIGA   80 (144)
T ss_dssp             EEEECCCS
T ss_pred             EEEECCCC
Confidence            99998873

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=98.20  E-value=1.7e-06  Score=77.69  Aligned_cols=80  Identities=18%  Similarity=0.269  Sum_probs=58.3

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDI  109 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~  109 (305)
                      .|+++||+||+|+||..+++.+...|++|+++++++.+.+.+.+.+...    ..+|.++.+++.+.++++..  +.+|+
T Consensus       155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~g~~----~~~d~~~~~~~~~~~~~~~~--~~~d~  228 (345)
T 2j3h_A          155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGFD----DAFNYKEESDLTAALKRCFP--NGIDI  228 (345)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTSCCS----EEEETTSCSCSHHHHHHHCT--TCEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCc----eEEecCCHHHHHHHHHHHhC--CCCcE
Confidence            5899999999999999999999999999999999877666554333222    22476654344444444322  46999


Q ss_pred             EEEcCC
Q 021960          110 LYNNAG  115 (305)
Q Consensus       110 li~nag  115 (305)
                      +|+|+|
T Consensus       229 vi~~~g  234 (345)
T 2j3h_A          229 YFENVG  234 (345)
T ss_dssp             EEESSC
T ss_pred             EEECCC
Confidence            999987

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=98.17  E-value=2.2e-06  Score=76.42  Aligned_cols=79  Identities=16%  Similarity=0.154  Sum_probs=57.6

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDI  109 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~  109 (305)
                      .|+++||+||+|+||..+++.+...|++|+++++++.+.+.+.+ +...    ..+|.++.+..+.+.+...  ...+|+
T Consensus       140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~-~g~~----~~~~~~~~~~~~~~~~~~~--~~~~D~  212 (327)
T 1qor_A          140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK-AGAW----QVINYREEDLVERLKEITG--GKKVRV  212 (327)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH-HTCS----EEEETTTSCHHHHHHHHTT--TCCEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cCCC----EEEECCCccHHHHHHHHhC--CCCceE
Confidence            58999999999999999999999999999999998776665544 2222    2357766544444433221  125999


Q ss_pred             EEEcCC
Q 021960          110 LYNNAG  115 (305)
Q Consensus       110 li~nag  115 (305)
                      +|+|+|
T Consensus       213 vi~~~g  218 (327)
T 1qor_A          213 VYDSVG  218 (327)
T ss_dssp             EEECSC
T ss_pred             EEECCc
Confidence            999998

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.17  E-value=6.4e-06  Score=63.91  Aligned_cols=75  Identities=19%  Similarity=0.159  Sum_probs=58.4

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDI  109 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~  109 (305)
                      ..+.++|+|+ |.+|.++++.|.++|++|+++++++...+.+.+.    .+.++.+|.+|.+.++++      .....|.
T Consensus         5 ~~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~----~~~~~~gd~~~~~~l~~~------~~~~~d~   73 (141)
T 3llv_A            5 GRYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDE----GFDAVIADPTDESFYRSL------DLEGVSA   73 (141)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHT----TCEEEECCTTCHHHHHHS------CCTTCSE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHC----CCcEEECCCCCHHHHHhC------CcccCCE
Confidence            3568999998 7899999999999999999999987766555432    267788999998776643      1236899


Q ss_pred             EEEcCC
Q 021960          110 LYNNAG  115 (305)
Q Consensus       110 li~nag  115 (305)
                      +|.+.+
T Consensus        74 vi~~~~   79 (141)
T 3llv_A           74 VLITGS   79 (141)
T ss_dssp             EEECCS
T ss_pred             EEEecC
Confidence            998765

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=98.16  E-value=3.5e-06  Score=75.26  Aligned_cols=80  Identities=20%  Similarity=0.245  Sum_probs=57.9

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDI  109 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~  109 (305)
                      .|+++||+||+|+||.++++.+...|++|+++++++.+.+.+.+ +...    ..+|.++.+..+.+.+.. .. ..+|+
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~-~g~~----~~~d~~~~~~~~~i~~~~-~~-~~~d~  217 (333)
T 1wly_A          145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARK-LGCH----HTINYSTQDFAEVVREIT-GG-KGVDV  217 (333)
T ss_dssp             TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-HTCS----EEEETTTSCHHHHHHHHH-TT-CCEEE
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCCC----EEEECCCHHHHHHHHHHh-CC-CCCeE
Confidence            57899999999999999999999999999999998766665543 3222    234776654444433322 11 25999


Q ss_pred             EEEcCCC
Q 021960          110 LYNNAGV  116 (305)
Q Consensus       110 li~nag~  116 (305)
                      +|+|+|.
T Consensus       218 vi~~~g~  224 (333)
T 1wly_A          218 VYDSIGK  224 (333)
T ss_dssp             EEECSCT
T ss_pred             EEECCcH
Confidence            9999984

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=98.15  E-value=8.5e-06  Score=75.81  Aligned_cols=85  Identities=20%  Similarity=0.337  Sum_probs=59.3

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCe-EEEEecCC---------CHHHHHHHHHH
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPV-TFVHCDVS---------LEEDIENLINS   99 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v-~~~~~D~~---------d~~~i~~~~~~   99 (305)
                      .|++|||+||+|+||..++..+...|++|+++.+++.+.+.+.+ +....+ .....|+.         +.++++.+.++
T Consensus       220 ~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~~-lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (447)
T 4a0s_A          220 QGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVRA-LGCDLVINRAELGITDDIADDPRRVVETGRKLAKL  298 (447)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-TTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-cCCCEEEecccccccccccccccccchhhhHHHHH
Confidence            58999999999999999999999999999999888777665543 322211 11111221         12455556666


Q ss_pred             HHHhcC-CccEEEEcCC
Q 021960          100 TVSRYG-RLDILYNNAG  115 (305)
Q Consensus       100 ~~~~~g-~id~li~nag  115 (305)
                      +.+..+ .+|++|.++|
T Consensus       299 v~~~~g~g~Dvvid~~G  315 (447)
T 4a0s_A          299 VVEKAGREPDIVFEHTG  315 (447)
T ss_dssp             HHHHHSSCCSEEEECSC
T ss_pred             HHHHhCCCceEEEECCC
Confidence            666554 5999999988

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=98.13  E-value=4.8e-06  Score=74.44  Aligned_cols=79  Identities=22%  Similarity=0.283  Sum_probs=57.2

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDI  109 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~  109 (305)
                      .|+++||+||+|+||..+++.+...|++|+++++++.+.+.+.+.+...    ..+|.++.+..+.+.+..   .+.+|+
T Consensus       149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~----~~~~~~~~~~~~~~~~~~---~~~~d~  221 (336)
T 4b7c_A          149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGFD----GAIDYKNEDLAAGLKREC---PKGIDV  221 (336)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCS----EEEETTTSCHHHHHHHHC---TTCEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCC----EEEECCCHHHHHHHHHhc---CCCceE
Confidence            5899999999999999999999999999999999887776653333222    234666643333332221   236999


Q ss_pred             EEEcCC
Q 021960          110 LYNNAG  115 (305)
Q Consensus       110 li~nag  115 (305)
                      +|+|+|
T Consensus       222 vi~~~g  227 (336)
T 4b7c_A          222 FFDNVG  227 (336)
T ss_dssp             EEESSC
T ss_pred             EEECCC
Confidence            999998

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=98.13  E-value=3.4e-06  Score=76.08  Aligned_cols=79  Identities=22%  Similarity=0.283  Sum_probs=56.3

Q ss_pred             CC--CEEEEecCCCchHHHHHHHHHHcCC-eEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCC
Q 021960           30 EG--KVAIITGGARGIGEAAVRLFARHGA-KVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGR  106 (305)
Q Consensus        30 ~~--k~vlVtGas~giG~~ia~~l~~~g~-~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~  106 (305)
                      .|  +++||+||+||||..+++.+...|+ +|+++++++.+.+.+.+.+...    ..+|.++.+..+.+ .+...  +.
T Consensus       158 ~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~~----~~~d~~~~~~~~~~-~~~~~--~~  230 (357)
T 2zb4_A          158 AGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFD----AAINYKKDNVAEQL-RESCP--AG  230 (357)
T ss_dssp             TTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCCS----EEEETTTSCHHHHH-HHHCT--TC
T ss_pred             CCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCc----eEEecCchHHHHHH-HHhcC--CC
Confidence            46  8999999999999999999999999 9999999876666555433222    23577663322222 22211  25


Q ss_pred             ccEEEEcCC
Q 021960          107 LDILYNNAG  115 (305)
Q Consensus       107 id~li~nag  115 (305)
                      +|++|+|+|
T Consensus       231 ~d~vi~~~G  239 (357)
T 2zb4_A          231 VDVYFDNVG  239 (357)
T ss_dssp             EEEEEESCC
T ss_pred             CCEEEECCC
Confidence            999999998

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=98.11  E-value=6.7e-06  Score=73.49  Aligned_cols=149  Identities=9%  Similarity=0.021  Sum_probs=90.8

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHcCC-------eEEEEecC----cchhhhHhhhc-CC-CCeEEEEecCCCHHHHHHHH
Q 021960           31 GKVAIITGGARGIGEAAVRLFARHGA-------KVVIADVE----DTLGSVLASTL-AP-APVTFVHCDVSLEEDIENLI   97 (305)
Q Consensus        31 ~k~vlVtGas~giG~~ia~~l~~~g~-------~vv~~~r~----~~~~~~~~~~~-~~-~~v~~~~~D~~d~~~i~~~~   97 (305)
                      ..+++||||+|.+|.+++..|+..|.       .|++++++    +.+.+.....+ .. ..+.   .|+....+..+.+
T Consensus         5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~~---~~i~~~~~~~~al   81 (329)
T 1b8p_A            5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPLL---AGMTAHADPMTAF   81 (329)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTTE---EEEEEESSHHHHT
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhccccc---CcEEEecCcHHHh
Confidence            45899999999999999999999885       68888887    33222111111 11 1121   2333222223322


Q ss_pred             HHHHHhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccc----
Q 021960           98 NSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGV----  173 (305)
Q Consensus        98 ~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~----  173 (305)
                             ...|+|||.||.....       ..+..   +.+..|+.....+.+.+....  ...++||++|.....    
T Consensus        82 -------~~aD~Vi~~ag~~~~~-------g~~r~---dl~~~N~~i~~~i~~~i~~~~--~p~a~ii~~SNPv~~~t~~  142 (329)
T 1b8p_A           82 -------KDADVALLVGARPRGP-------GMERK---DLLEANAQIFTVQGKAIDAVA--SRNIKVLVVGNPANTNAYI  142 (329)
T ss_dssp             -------TTCSEEEECCCCCCCT-------TCCHH---HHHHHHHHHHHHHHHHHHHHS--CTTCEEEECSSSHHHHHHH
T ss_pred             -------CCCCEEEEeCCCCCCC-------CCCHH---HHHHHHHHHHHHHHHHHHHhc--CCCeEEEEccCchHHHHHH
Confidence                   3689999999964321       12333   356788877666666655431  145689999874421    


Q ss_pred             ----c-CCCCCccchhhHHHHHHHHHHHHHHHC
Q 021960          174 ----M-GGLGPHAYTASKHAIVGLTKNAACELG  201 (305)
Q Consensus       174 ----~-~~~~~~~Y~~sKaa~~~~~~~la~e~~  201 (305)
                          . +.|....|+.++.--..+...++..+.
T Consensus       143 ~~~~~~~~p~~~v~g~t~Ld~~r~~~~la~~lg  175 (329)
T 1b8p_A          143 AMKSAPSLPAKNFTAMLRLDHNRALSQIAAKTG  175 (329)
T ss_dssp             HHHTCTTSCGGGEEECCHHHHHHHHHHHHHHHT
T ss_pred             HHHHcCCCCHHHEEEeecHHHHHHHHHHHHHhC
Confidence                1 334444688887666677777887765

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=98.10  E-value=5.1e-07  Score=79.23  Aligned_cols=77  Identities=21%  Similarity=0.214  Sum_probs=54.8

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCC---CCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAP---APVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~---~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      ++++|+++|||++ |+|+++++.|++.| +|++++|+.++.+.+.+.+..   ... .+.+|+++.          .+..
T Consensus       125 ~l~~k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~-~~~~d~~~~----------~~~~  191 (287)
T 1nvt_A          125 RVKDKNIVIYGAG-GAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKF-GEEVKFSGL----------DVDL  191 (287)
T ss_dssp             CCCSCEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCH-HHHEEEECT----------TCCC
T ss_pred             CcCCCEEEEECch-HHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhccccc-ceeEEEeeH----------HHhh
Confidence            5678999999997 99999999999999 999999987665554433211   000 112344441          2345


Q ss_pred             CCccEEEEcCCCC
Q 021960          105 GRLDILYNNAGVL  117 (305)
Q Consensus       105 g~id~li~nag~~  117 (305)
                      +.+|+||+|+|..
T Consensus       192 ~~~DilVn~ag~~  204 (287)
T 1nvt_A          192 DGVDIIINATPIG  204 (287)
T ss_dssp             TTCCEEEECSCTT
T ss_pred             CCCCEEEECCCCC
Confidence            6899999999864

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=98.08  E-value=4.9e-06  Score=75.03  Aligned_cols=80  Identities=20%  Similarity=0.263  Sum_probs=57.3

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDI  109 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~  109 (305)
                      .|+++||+||+|+||..+++.+...|++|+++++++.+.+.+. .+...    ..+|.++.+..+.+.+.. . .+.+|+
T Consensus       162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~g~~----~~~~~~~~~~~~~~~~~~-~-~~~~d~  234 (354)
T 2j8z_A          162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAE-KLGAA----AGFNYKKEDFSEATLKFT-K-GAGVNL  234 (354)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HHTCS----EEEETTTSCHHHHHHHHT-T-TSCEEE
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCc----EEEecCChHHHHHHHHHh-c-CCCceE
Confidence            5899999999999999999999999999999999877666553 33222    235766644333332221 1 125999


Q ss_pred             EEEcCCC
Q 021960          110 LYNNAGV  116 (305)
Q Consensus       110 li~nag~  116 (305)
                      +|+|+|.
T Consensus       235 vi~~~G~  241 (354)
T 2j8z_A          235 ILDCIGG  241 (354)
T ss_dssp             EEESSCG
T ss_pred             EEECCCc
Confidence            9999984

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=98.07  E-value=5.8e-07  Score=85.44  Aligned_cols=102  Identities=20%  Similarity=0.178  Sum_probs=60.8

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRL  107 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~i  107 (305)
                      .+++|+++|||| ||+|++++..|++.|++|++++|+..+.+.+.+.+.. ++.    ++.|   ++++      ..+.+
T Consensus       361 ~l~~k~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~~~~a~~la~~~~~-~~~----~~~d---l~~~------~~~~~  425 (523)
T 2o7s_A          361 PLASKTVVVIGA-GGAGKALAYGAKEKGAKVVIANRTYERALELAEAIGG-KAL----SLTD---LDNY------HPEDG  425 (523)
T ss_dssp             -----CEEEECC-SHHHHHHHHHHHHHCC-CEEEESSHHHHHHHHHHTTC--CE----ETTT---TTTC--------CCS
T ss_pred             ccCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCC-cee----eHHH---hhhc------cccCc
Confidence            467899999999 5999999999999999999999987776666555422 221    2222   1110      11358


Q ss_pred             cEEEEcCCCCCCCC-CCCcccCCCHHHHHHHHHHHhHH
Q 021960          108 DILYNNAGVLGNQR-KHKSIIDFDADEFDNVMRVNVKG  144 (305)
Q Consensus       108 d~li~nag~~~~~~-~~~~~~~~~~~~~~~~~~~n~~~  144 (305)
                      |+||||+|...... ...++.+.+.+.+...+++|+.+
T Consensus       426 DilVN~agvg~~~~~~~~~~~~~~~~~~~~v~Dvny~p  463 (523)
T 2o7s_A          426 MVLANTTSMGMQPNVEETPISKDALKHYALVFDAVYTP  463 (523)
T ss_dssp             EEEEECSSTTCTTCTTCCSSCTTTGGGEEEEEECCCSS
T ss_pred             eEEEECCCCCCCCCCCCCCCChHHcCcCcEEEEEeeCC
Confidence            99999999642210 01234444445555666666654

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=98.06  E-value=7.3e-06  Score=73.84  Aligned_cols=79  Identities=14%  Similarity=0.186  Sum_probs=56.6

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDI  109 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~  109 (305)
                      .|+++||+||+|+||..+++.+...|++|+++++++.+.+...+ +...    ..+|.++.+..+.+.+.. . ...+|+
T Consensus       170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-~ga~----~~~d~~~~~~~~~~~~~~-~-~~~~D~  242 (351)
T 1yb5_A          170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQ-NGAH----EVFNHREVNYIDKIKKYV-G-EKGIDI  242 (351)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-TTCS----EEEETTSTTHHHHHHHHH-C-TTCEEE
T ss_pred             CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHH-cCCC----EEEeCCCchHHHHHHHHc-C-CCCcEE
Confidence            58899999999999999999999999999999998776664432 3222    235776654333333222 1 126999


Q ss_pred             EEEcCC
Q 021960          110 LYNNAG  115 (305)
Q Consensus       110 li~nag  115 (305)
                      +|+|+|
T Consensus       243 vi~~~G  248 (351)
T 1yb5_A          243 IIEMLA  248 (351)
T ss_dssp             EEESCH
T ss_pred             EEECCC
Confidence            999988

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=98.03  E-value=2e-05  Score=69.72  Aligned_cols=82  Identities=20%  Similarity=0.200  Sum_probs=58.5

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCC-eEEEEecC---cchhhhHhhhcCC-CCeEEEEecCCCHHHHHHHHHHHH
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGA-KVVIADVE---DTLGSVLASTLAP-APVTFVHCDVSLEEDIENLINSTV  101 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~-~vv~~~r~---~~~~~~~~~~~~~-~~v~~~~~D~~d~~~i~~~~~~~~  101 (305)
                      .++++|++||+|+ ||+|++++..|++.|+ +|++++|+   .++.+.+.+.+.. ..+.+...++.+.+++.+.+.   
T Consensus       150 ~~l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~---  225 (315)
T 3tnl_A          150 HDIIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIA---  225 (315)
T ss_dssp             CCCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHH---
T ss_pred             CCccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhc---
Confidence            3578999999997 7999999999999999 79999998   5555544433311 113334557777666655443   


Q ss_pred             HhcCCccEEEEcCCC
Q 021960          102 SRYGRLDILYNNAGV  116 (305)
Q Consensus       102 ~~~g~id~li~nag~  116 (305)
                          ..|+||++...
T Consensus       226 ----~aDiIINaTp~  236 (315)
T 3tnl_A          226 ----ESVIFTNATGV  236 (315)
T ss_dssp             ----TCSEEEECSST
T ss_pred             ----CCCEEEECccC
Confidence                58999987643

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=98.00  E-value=8.6e-06  Score=70.73  Aligned_cols=75  Identities=13%  Similarity=0.187  Sum_probs=54.4

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCC-CCeEEEEecCCCHHHHHHHHHHHHHhcCC
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAP-APVTFVHCDVSLEEDIENLINSTVSRYGR  106 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~i~~~~~~~~~~~g~  106 (305)
                      ++.+|+++|+|+ ||+|++++..|++.|++|++++|+.++.+.+.+.+.. ..+  ...|+   +++       .+  +.
T Consensus       116 ~l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~~~--~~~~~---~~~-------~~--~~  180 (271)
T 1nyt_A          116 IRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSI--QALSM---DEL-------EG--HE  180 (271)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSE--EECCS---GGG-------TT--CC
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccCCe--eEecH---HHh-------cc--CC
Confidence            467899999998 7999999999999999999999987766555544321 122  12333   111       11  57


Q ss_pred             ccEEEEcCCCC
Q 021960          107 LDILYNNAGVL  117 (305)
Q Consensus       107 id~li~nag~~  117 (305)
                      .|+||+|++..
T Consensus       181 ~DivVn~t~~~  191 (271)
T 1nyt_A          181 FDLIINATSSG  191 (271)
T ss_dssp             CSEEEECCSCG
T ss_pred             CCEEEECCCCC
Confidence            99999999864

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=97.93  E-value=1.6e-05  Score=71.34  Aligned_cols=80  Identities=15%  Similarity=0.257  Sum_probs=56.3

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHc-CCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARH-GAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLD  108 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~-g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id  108 (305)
                      .|+++||+|++|+||..+++.+... |++|+++++++.+.+.+.+ +...    ..+|.++.+..+.+. ++... +.+|
T Consensus       170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~-~g~~----~~~~~~~~~~~~~~~-~~~~~-~~~d  242 (347)
T 1jvb_A          170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKR-AGAD----YVINASMQDPLAEIR-RITES-KGVD  242 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHH-HTCS----EEEETTTSCHHHHHH-HHTTT-SCEE
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH-hCCC----EEecCCCccHHHHHH-HHhcC-CCce
Confidence            5789999999999999999999998 9999999988776665543 3222    224666543333222 22111 4799


Q ss_pred             EEEEcCCC
Q 021960          109 ILYNNAGV  116 (305)
Q Consensus       109 ~li~nag~  116 (305)
                      ++|+|+|.
T Consensus       243 ~vi~~~g~  250 (347)
T 1jvb_A          243 AVIDLNNS  250 (347)
T ss_dssp             EEEESCCC
T ss_pred             EEEECCCC
Confidence            99999984

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=97.93  E-value=0.0001  Score=66.16  Aligned_cols=79  Identities=14%  Similarity=0.133  Sum_probs=55.2

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEE
Q 021960           31 GKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDIL  110 (305)
Q Consensus        31 ~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~l  110 (305)
                      ++++||+||+|+||..++..+...|++|+++++++.+.+.+.+ +...    ..+|..+.+-.+.+.+.. .. ..+|++
T Consensus       165 ~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~-~Ga~----~~~~~~~~~~~~~v~~~~-~~-~g~D~v  237 (349)
T 3pi7_A          165 EKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKD-IGAA----HVLNEKAPDFEATLREVM-KA-EQPRIF  237 (349)
T ss_dssp             CSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHHH-HTCS----EEEETTSTTHHHHHHHHH-HH-HCCCEE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCCC----EEEECCcHHHHHHHHHHh-cC-CCCcEE
Confidence            3899999999999999999998999999999988877766543 3222    224555533333332222 21 259999


Q ss_pred             EEcCCC
Q 021960          111 YNNAGV  116 (305)
Q Consensus       111 i~nag~  116 (305)
                      |.++|.
T Consensus       238 id~~g~  243 (349)
T 3pi7_A          238 LDAVTG  243 (349)
T ss_dssp             EESSCH
T ss_pred             EECCCC
Confidence            999883

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=97.86  E-value=3.6e-05  Score=69.27  Aligned_cols=79  Identities=23%  Similarity=0.293  Sum_probs=57.5

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDI  109 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~  109 (305)
                      .|+++||+||+|+||..++..+...|++|+++++++.+.+.+.+ +...    ..+|.++.+..+.+.+ ..  .+.+|+
T Consensus       167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-lGa~----~~~~~~~~~~~~~~~~-~~--~~g~Dv  238 (353)
T 4dup_A          167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACER-LGAK----RGINYRSEDFAAVIKA-ET--GQGVDI  238 (353)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-HTCS----EEEETTTSCHHHHHHH-HH--SSCEEE
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-cCCC----EEEeCCchHHHHHHHH-Hh--CCCceE
Confidence            58899999999999999999999999999999998877766554 3222    2246655433333332 22  346999


Q ss_pred             EEEcCCC
Q 021960          110 LYNNAGV  116 (305)
Q Consensus       110 li~nag~  116 (305)
                      +|.|+|.
T Consensus       239 vid~~g~  245 (353)
T 4dup_A          239 ILDMIGA  245 (353)
T ss_dssp             EEESCCG
T ss_pred             EEECCCH
Confidence            9999983

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=97.81  E-value=9.7e-05  Score=58.06  Aligned_cols=78  Identities=10%  Similarity=0.066  Sum_probs=56.6

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCc-chhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVED-TLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLD  108 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~-~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id  108 (305)
                      ..+.++|.|+ |.+|..+++.|.+.|++|++++++. ...+.+..... ..+.++..|.+|.+.+++.      .....|
T Consensus         2 ~~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~-~~~~~i~gd~~~~~~l~~a------~i~~ad   73 (153)
T 1id1_A            2 RKDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLG-DNADVIPGDSNDSSVLKKA------GIDRCR   73 (153)
T ss_dssp             CCSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHC-TTCEEEESCTTSHHHHHHH------TTTTCS
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhc-CCCeEEEcCCCCHHHHHHc------ChhhCC
Confidence            3567889986 9999999999999999999999873 33333333222 2377889999998766543      123678


Q ss_pred             EEEEcCC
Q 021960          109 ILYNNAG  115 (305)
Q Consensus       109 ~li~nag  115 (305)
                      .+|.+.+
T Consensus        74 ~vi~~~~   80 (153)
T 1id1_A           74 AILALSD   80 (153)
T ss_dssp             EEEECSS
T ss_pred             EEEEecC
Confidence            8988765

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=97.79  E-value=4.5e-05  Score=68.35  Aligned_cols=77  Identities=13%  Similarity=0.161  Sum_probs=56.1

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhc--CCc
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRY--GRL  107 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~--g~i  107 (305)
                      .|+++||+|++|++|..+++.+...|++|+++++++.+.+.+.+ +...    ..+|.++.+-.    +++.+..  ..+
T Consensus       166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~-~ga~----~~~d~~~~~~~----~~~~~~~~~~~~  236 (343)
T 2eih_A          166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKA-LGAD----ETVNYTHPDWP----KEVRRLTGGKGA  236 (343)
T ss_dssp             TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-HTCS----EEEETTSTTHH----HHHHHHTTTTCE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh-cCCC----EEEcCCcccHH----HHHHHHhCCCCc
Confidence            57899999999999999999999999999999998777665543 3222    12577664322    2222222  369


Q ss_pred             cEEEEcCC
Q 021960          108 DILYNNAG  115 (305)
Q Consensus       108 d~li~nag  115 (305)
                      |++|+++|
T Consensus       237 d~vi~~~g  244 (343)
T 2eih_A          237 DKVVDHTG  244 (343)
T ss_dssp             EEEEESSC
T ss_pred             eEEEECCC
Confidence            99999998

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=97.79  E-value=6.7e-05  Score=67.75  Aligned_cols=78  Identities=23%  Similarity=0.348  Sum_probs=54.4

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDI  109 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~  109 (305)
                      .|+++||+||+|+||..++..+...|++|+++++++.+.+.+.+ +...    ..+|..+.+ +.+.+.+..  .+.+|+
T Consensus       163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~-~Ga~----~~~~~~~~~-~~~~~~~~~--~~g~D~  234 (362)
T 2c0c_A          163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKS-LGCD----RPINYKTEP-VGTVLKQEY--PEGVDV  234 (362)
T ss_dssp             TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-TTCS----EEEETTTSC-HHHHHHHHC--TTCEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH-cCCc----EEEecCChh-HHHHHHHhc--CCCCCE
Confidence            57899999999999999999999999999999998776665543 3222    123554422 222222221  135999


Q ss_pred             EEEcCC
Q 021960          110 LYNNAG  115 (305)
Q Consensus       110 li~nag  115 (305)
                      +|.++|
T Consensus       235 vid~~g  240 (362)
T 2c0c_A          235 VYESVG  240 (362)
T ss_dssp             EEECSC
T ss_pred             EEECCC
Confidence            999987

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=97.79  E-value=0.00025  Score=63.16  Aligned_cols=116  Identities=18%  Similarity=0.211  Sum_probs=68.7

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHcC--CeEEEEecCcchhhhHhhhcC-CCCeEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 021960           31 GKVAIITGGARGIGEAAVRLFARHG--AKVVIADVEDTLGSVLASTLA-PAPVTFVHCDVSLEEDIENLINSTVSRYGRL  107 (305)
Q Consensus        31 ~k~vlVtGas~giG~~ia~~l~~~g--~~vv~~~r~~~~~~~~~~~~~-~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~i  107 (305)
                      ..+++||||+|.+|..++..|+++|  ..|+++++++... ...+... .....+ .. +.+..+.++.+       ...
T Consensus         8 ~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~~~-~~~dL~~~~~~~~v-~~-~~~t~d~~~al-------~ga   77 (326)
T 1smk_A            8 GFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPG-VTADISHMDTGAVV-RG-FLGQQQLEAAL-------TGM   77 (326)
T ss_dssp             CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSHHH-HHHHHHTSCSSCEE-EE-EESHHHHHHHH-------TTC
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCcHh-HHHHhhcccccceE-EE-EeCCCCHHHHc-------CCC
Confidence            3579999999999999999999988  6888898776521 1111111 111111 11 22334444433       368


Q ss_pred             cEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecc
Q 021960          108 DILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTAS  169 (305)
Q Consensus       108 d~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS  169 (305)
                      |+||++||.....   +    .+..   ..+..|+.....+.+.+...   ...+.|+++|-
T Consensus        78 DvVi~~ag~~~~~---g----~~r~---dl~~~N~~~~~~i~~~i~~~---~p~~~viv~SN  126 (326)
T 1smk_A           78 DLIIVPAGVPRKP---G----MTRD---DLFKINAGIVKTLCEGIAKC---CPRAIVNLISN  126 (326)
T ss_dssp             SEEEECCCCCCCS---S----CCCS---HHHHHHHHHHHHHHHHHHHH---CTTSEEEECCS
T ss_pred             CEEEEcCCcCCCC---C----CCHH---HHHHHHHHHHHHHHHHHHhh---CCCeEEEEECC
Confidence            9999999965321   1    1111   34678887776666666543   23445555443

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=97.77  E-value=3.5e-05  Score=68.71  Aligned_cols=78  Identities=15%  Similarity=0.239  Sum_probs=56.0

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhc--CCc
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRY--GRL  107 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~--g~i  107 (305)
                      .|+++||+||+|+||..++..+...|++|+++++++.+.+.+.+ +...    ..+|.++.+..+    .+.+..  ..+
T Consensus       148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-~ga~----~~~~~~~~~~~~----~~~~~~~~~g~  218 (334)
T 3qwb_A          148 KGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKE-YGAE----YLINASKEDILR----QVLKFTNGKGV  218 (334)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-TTCS----EEEETTTSCHHH----HHHHHTTTSCE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCCc----EEEeCCCchHHH----HHHHHhCCCCc
Confidence            58999999999999999999999999999999998777665443 3222    224555533333    233322  259


Q ss_pred             cEEEEcCCC
Q 021960          108 DILYNNAGV  116 (305)
Q Consensus       108 d~li~nag~  116 (305)
                      |++|+|+|.
T Consensus       219 D~vid~~g~  227 (334)
T 3qwb_A          219 DASFDSVGK  227 (334)
T ss_dssp             EEEEECCGG
T ss_pred             eEEEECCCh
Confidence            999999983

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=97.76  E-value=3.9e-05  Score=68.16  Aligned_cols=78  Identities=18%  Similarity=0.250  Sum_probs=56.4

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhc--CCc
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRY--GRL  107 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~--g~i  107 (305)
                      .|+++||+||+|+||..++..+...|++|+++++++.+.+.+.+ +...    ..+|.++.+..+.    +.+..  ..+
T Consensus       140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-~Ga~----~~~~~~~~~~~~~----~~~~~~~~g~  210 (325)
T 3jyn_A          140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKA-LGAW----ETIDYSHEDVAKR----VLELTDGKKC  210 (325)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH-HTCS----EEEETTTSCHHHH----HHHHTTTCCE
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCCC----EEEeCCCccHHHH----HHHHhCCCCc
Confidence            58899999999999999999999999999999998877665543 3222    2246655433333    33322  259


Q ss_pred             cEEEEcCCC
Q 021960          108 DILYNNAGV  116 (305)
Q Consensus       108 d~li~nag~  116 (305)
                      |++|.|+|.
T Consensus       211 Dvvid~~g~  219 (325)
T 3jyn_A          211 PVVYDGVGQ  219 (325)
T ss_dssp             EEEEESSCG
T ss_pred             eEEEECCCh
Confidence            999999984

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=97.74  E-value=5.3e-05  Score=67.78  Aligned_cols=78  Identities=15%  Similarity=0.110  Sum_probs=56.2

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhc--CCc
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRY--GRL  107 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~--g~i  107 (305)
                      .|++|||+||+|+||..++..+...|++|+++++++.+.+.+.+ +...    ..+|..+.+..+.    +.+..  ..+
T Consensus       144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-lga~----~~~~~~~~~~~~~----~~~~~~~~g~  214 (340)
T 3gms_A          144 RNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLR-LGAA----YVIDTSTAPLYET----VMELTNGIGA  214 (340)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH-HTCS----EEEETTTSCHHHH----HHHHTTTSCE
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-CCCc----EEEeCCcccHHHH----HHHHhCCCCC
Confidence            58899999999999999999988899999999998887766554 3222    2246555333332    22222  259


Q ss_pred             cEEEEcCCC
Q 021960          108 DILYNNAGV  116 (305)
Q Consensus       108 d~li~nag~  116 (305)
                      |++|.|+|.
T Consensus       215 Dvvid~~g~  223 (340)
T 3gms_A          215 DAAIDSIGG  223 (340)
T ss_dssp             EEEEESSCH
T ss_pred             cEEEECCCC
Confidence            999999984

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=97.69  E-value=0.00016  Score=55.38  Aligned_cols=75  Identities=16%  Similarity=0.311  Sum_probs=54.9

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEE
Q 021960           31 GKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDIL  110 (305)
Q Consensus        31 ~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~l  110 (305)
                      ++.++|+|+ |.+|..+++.|.+.|++|+++++++...+.+.+..   .+.++..|.++.+.+.+.      .....|++
T Consensus         4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~---~~~~~~~d~~~~~~l~~~------~~~~~d~v   73 (140)
T 1lss_A            4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEI---DALVINGDCTKIKTLEDA------GIEDADMY   73 (140)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC---SSEEEESCTTSHHHHHHT------TTTTCSEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhc---CcEEEEcCCCCHHHHHHc------CcccCCEE
Confidence            457899987 99999999999999999999999876555443321   255677898887654321      12468999


Q ss_pred             EEcCC
Q 021960          111 YNNAG  115 (305)
Q Consensus       111 i~nag  115 (305)
                      |++.+
T Consensus        74 i~~~~   78 (140)
T 1lss_A           74 IAVTG   78 (140)
T ss_dssp             EECCS
T ss_pred             EEeeC
Confidence            99864

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=97.69  E-value=5.6e-05  Score=70.47  Aligned_cols=84  Identities=14%  Similarity=0.240  Sum_probs=60.9

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEE--Eec--------CCCHHHHHHHHHH
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFV--HCD--------VSLEEDIENLINS   99 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~--~~D--------~~d~~~i~~~~~~   99 (305)
                      .|++|||+||+|+||...+..+...|++|+++.+++.+.+.+.+ +... ..+-  ..|        ..+.++++.+.++
T Consensus       228 ~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~~~-lGa~-~vi~~~~~d~~~~~~~~~~~~~~~~~~~~~  305 (456)
T 3krt_A          228 QGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICRA-MGAE-AIIDRNAEGYRFWKDENTQDPKEWKRFGKR  305 (456)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-HTCC-EEEETTTTTCCSEEETTEECHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHHHh-hCCc-EEEecCcCcccccccccccchHHHHHHHHH
Confidence            58899999999999999999888999999998887777665543 3222 1111  111        2355667777777


Q ss_pred             HHHhcC--CccEEEEcCC
Q 021960          100 TVSRYG--RLDILYNNAG  115 (305)
Q Consensus       100 ~~~~~g--~id~li~nag  115 (305)
                      +.+..+  .+|++|.++|
T Consensus       306 i~~~t~g~g~Dvvid~~G  323 (456)
T 3krt_A          306 IRELTGGEDIDIVFEHPG  323 (456)
T ss_dssp             HHHHHTSCCEEEEEECSC
T ss_pred             HHHHhCCCCCcEEEEcCC
Confidence            776543  6999999988

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=97.68  E-value=0.00012  Score=57.64  Aligned_cols=78  Identities=19%  Similarity=0.201  Sum_probs=55.8

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRL  107 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~i  107 (305)
                      +..++.++|+|+ |.+|..+++.|.+.|++|++++++....+.+..   ...+.++..|..+.+.+.+.      .....
T Consensus        16 ~~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~---~~g~~~~~~d~~~~~~l~~~------~~~~a   85 (155)
T 2g1u_A           16 KQKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNS---EFSGFTVVGDAAEFETLKEC------GMEKA   85 (155)
T ss_dssp             -CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCT---TCCSEEEESCTTSHHHHHTT------TGGGC
T ss_pred             ccCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHh---cCCCcEEEecCCCHHHHHHc------CcccC
Confidence            446789999996 999999999999999999999998766543321   12245677888886544321      12358


Q ss_pred             cEEEEcCC
Q 021960          108 DILYNNAG  115 (305)
Q Consensus       108 d~li~nag  115 (305)
                      |+||.+.+
T Consensus        86 d~Vi~~~~   93 (155)
T 2g1u_A           86 DMVFAFTN   93 (155)
T ss_dssp             SEEEECSS
T ss_pred             CEEEEEeC
Confidence            99998866

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=97.67  E-value=0.00012  Score=65.59  Aligned_cols=77  Identities=22%  Similarity=0.349  Sum_probs=54.4

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcC--Cc
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYG--RL  107 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g--~i  107 (305)
                      .|++|||+||+|+||..++..+...|++|+++++++.+.+.+.+ +...  .+  +|..  +++   .+++.+..+  .+
T Consensus       159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-~ga~--~v--~~~~--~~~---~~~v~~~~~~~g~  228 (342)
T 4eye_A          159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKS-VGAD--IV--LPLE--EGW---AKAVREATGGAGV  228 (342)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-HTCS--EE--EESS--TTH---HHHHHHHTTTSCE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-cCCc--EE--ecCc--hhH---HHHHHHHhCCCCc
Confidence            58899999999999999999999999999999998777665544 3222  12  2443  222   233333322  59


Q ss_pred             cEEEEcCCC
Q 021960          108 DILYNNAGV  116 (305)
Q Consensus       108 d~li~nag~  116 (305)
                      |++|.|+|.
T Consensus       229 Dvvid~~g~  237 (342)
T 4eye_A          229 DMVVDPIGG  237 (342)
T ss_dssp             EEEEESCC-
T ss_pred             eEEEECCch
Confidence            999999984

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=97.66  E-value=0.00069  Score=60.98  Aligned_cols=81  Identities=19%  Similarity=0.190  Sum_probs=57.9

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCe-EEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhc--CC
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAK-VVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRY--GR  106 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~-vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~--g~  106 (305)
                      .|++|||+|+ |++|...+..+...|++ |+++++++.+.+.+.+.  ...+..+..|-.+.+++.+   ++.+..  ..
T Consensus       179 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l--~~~~~~~~~~~~~~~~~~~---~v~~~t~g~g  252 (363)
T 3m6i_A          179 LGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI--CPEVVTHKVERLSAEESAK---KIVESFGGIE  252 (363)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH--CTTCEEEECCSCCHHHHHH---HHHHHTSSCC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh--chhcccccccccchHHHHH---HHHHHhCCCC
Confidence            4789999998 99999999888889997 88888888777766554  3334444555555554443   333333  25


Q ss_pred             ccEEEEcCCC
Q 021960          107 LDILYNNAGV  116 (305)
Q Consensus       107 id~li~nag~  116 (305)
                      +|++|.+.|.
T Consensus       253 ~Dvvid~~g~  262 (363)
T 3m6i_A          253 PAVALECTGV  262 (363)
T ss_dssp             CSEEEECSCC
T ss_pred             CCEEEECCCC
Confidence            9999999883

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=97.64  E-value=8.8e-05  Score=67.05  Aligned_cols=76  Identities=20%  Similarity=0.361  Sum_probs=53.7

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCc---chhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVED---TLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~---~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      .++|++|||+|+ |+||..+++.+...|++|+++++++   .+.+.+.+ +.   ...+  | .+ +-.+.+. + . . 
T Consensus       178 ~~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~-~g---a~~v--~-~~-~~~~~~~-~-~-~-  244 (366)
T 2cdc_A          178 TLNCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEE-TK---TNYY--N-SS-NGYDKLK-D-S-V-  244 (366)
T ss_dssp             SSTTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHH-HT---CEEE--E-CT-TCSHHHH-H-H-H-
T ss_pred             cCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHH-hC---Ccee--c-hH-HHHHHHH-H-h-C-
Confidence            455999999999 9999999999999999999999887   55544432 22   2223  5 54 2222222 2 1 2 


Q ss_pred             CCccEEEEcCCC
Q 021960          105 GRLDILYNNAGV  116 (305)
Q Consensus       105 g~id~li~nag~  116 (305)
                      +.+|++|.++|.
T Consensus       245 ~~~d~vid~~g~  256 (366)
T 2cdc_A          245 GKFDVIIDATGA  256 (366)
T ss_dssp             CCEEEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            579999999984

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=97.61  E-value=0.00017  Score=63.69  Aligned_cols=82  Identities=17%  Similarity=0.209  Sum_probs=55.2

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCC-eEEEEecC---cchhhhHhhhcCC-CCeEEEEecCCCHHHHHHHHHHHH
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGA-KVVIADVE---DTLGSVLASTLAP-APVTFVHCDVSLEEDIENLINSTV  101 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~-~vv~~~r~---~~~~~~~~~~~~~-~~v~~~~~D~~d~~~i~~~~~~~~  101 (305)
                      .++.+|++||+|+ ||.|++++..|++.|+ +|.++.|+   ..+.+.+.+.+.. ........++.+.+.+.+.+.   
T Consensus       144 ~~l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~---  219 (312)
T 3t4e_A          144 FDMRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALA---  219 (312)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHH---
T ss_pred             CCcCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhcc---
Confidence            3568999999997 8999999999999999 79999998   5445444433311 112233456666433333222   


Q ss_pred             HhcCCccEEEEcCCC
Q 021960          102 SRYGRLDILYNNAGV  116 (305)
Q Consensus       102 ~~~g~id~li~nag~  116 (305)
                          ..|+|||+-..
T Consensus       220 ----~~DiIINaTp~  230 (312)
T 3t4e_A          220 ----SADILTNGTKV  230 (312)
T ss_dssp             ----HCSEEEECSST
T ss_pred             ----CceEEEECCcC
Confidence                47999987643

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=97.58  E-value=0.00018  Score=65.09  Aligned_cols=72  Identities=17%  Similarity=0.183  Sum_probs=57.5

Q ss_pred             CEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEEE
Q 021960           32 KVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILY  111 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~li  111 (305)
                      +.|+|.|| |++|+.+++.|++. +.|.+.+++....+.+.+     .+..+.+|++|.+++.++++       +.|+||
T Consensus        17 mkilvlGa-G~vG~~~~~~L~~~-~~v~~~~~~~~~~~~~~~-----~~~~~~~d~~d~~~l~~~~~-------~~DvVi   82 (365)
T 3abi_A           17 MKVLILGA-GNIGRAIAWDLKDE-FDVYIGDVNNENLEKVKE-----FATPLKVDASNFDKLVEVMK-------EFELVI   82 (365)
T ss_dssp             CEEEEECC-SHHHHHHHHHHTTT-SEEEEEESCHHHHHHHTT-----TSEEEECCTTCHHHHHHHHT-------TCSEEE
T ss_pred             cEEEEECC-CHHHHHHHHHHhcC-CCeEEEEcCHHHHHHHhc-----cCCcEEEecCCHHHHHHHHh-------CCCEEE
Confidence            46999998 99999999998764 789999998766555432     35678899999998888775       689999


Q ss_pred             EcCCCC
Q 021960          112 NNAGVL  117 (305)
Q Consensus       112 ~nag~~  117 (305)
                      ++++..
T Consensus        83 ~~~p~~   88 (365)
T 3abi_A           83 GALPGF   88 (365)
T ss_dssp             ECCCGG
T ss_pred             EecCCc
Confidence            988753

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=97.56  E-value=0.00013  Score=63.60  Aligned_cols=78  Identities=22%  Similarity=0.315  Sum_probs=54.3

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCC-eEEEEecCcchhhhHhhhcCC--CCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGA-KVVIADVEDTLGSVLASTLAP--APVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~-~vv~~~r~~~~~~~~~~~~~~--~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      ++++|+++|+|+ ||+|++++..|++.|+ +|++++|+..+.+.+.+.+..  ..+.+...++.+.   .+.++      
T Consensus       124 ~l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~l---~~~l~------  193 (283)
T 3jyo_A          124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGI---EDVIA------  193 (283)
T ss_dssp             TCCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTTH---HHHHH------
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHHH---HHHHh------
Confidence            568999999998 8999999999999999 699999998776655544321  1122334454343   22222      


Q ss_pred             CCccEEEEcCCC
Q 021960          105 GRLDILYNNAGV  116 (305)
Q Consensus       105 g~id~li~nag~  116 (305)
                       ..|+||++...
T Consensus       194 -~~DiVInaTp~  204 (283)
T 3jyo_A          194 -AADGVVNATPM  204 (283)
T ss_dssp             -HSSEEEECSST
T ss_pred             -cCCEEEECCCC
Confidence             47999987643

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=97.51  E-value=0.00027  Score=64.21  Aligned_cols=78  Identities=21%  Similarity=0.266  Sum_probs=57.9

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRL  107 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~i  107 (305)
                      .+.+++++|+|+ |+||+.+++.+...|++|++++++..+.+.+.+... ..+   .++.++.+++.+++.       ..
T Consensus       165 ~l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g-~~~---~~~~~~~~~l~~~l~-------~a  232 (377)
T 2vhw_A          165 GVEPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFC-GRI---HTRYSSAYELEGAVK-------RA  232 (377)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTT-TSS---EEEECCHHHHHHHHH-------HC
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcC-Cee---EeccCCHHHHHHHHc-------CC
Confidence            578999999998 999999999999999999999998776655544332 222   234445555555443       48


Q ss_pred             cEEEEcCCCC
Q 021960          108 DILYNNAGVL  117 (305)
Q Consensus       108 d~li~nag~~  117 (305)
                      |+||++++..
T Consensus       233 DvVi~~~~~p  242 (377)
T 2vhw_A          233 DLVIGAVLVP  242 (377)
T ss_dssp             SEEEECCCCT
T ss_pred             CEEEECCCcC
Confidence            9999988753

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=97.50  E-value=0.00017  Score=62.55  Aligned_cols=75  Identities=15%  Similarity=0.196  Sum_probs=53.5

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCC-CCeEEEEecCCCHHHHHHHHHHHHHhcCC
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAP-APVTFVHCDVSLEEDIENLINSTVSRYGR  106 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~i~~~~~~~~~~~g~  106 (305)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+.+.+.... ..+..  +|+.   ++.       +  +.
T Consensus       116 ~~~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~~~~~--~~~~---~~~-------~--~~  180 (272)
T 1p77_A          116 LRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQA--VSMD---SIP-------L--QT  180 (272)
T ss_dssp             CCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEE--EEGG---GCC-------C--SC
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccCCeEE--eeHH---Hhc-------c--CC
Confidence            567899999998 7999999999999999999999997766665544321 12322  3331   110       1  47


Q ss_pred             ccEEEEcCCCC
Q 021960          107 LDILYNNAGVL  117 (305)
Q Consensus       107 id~li~nag~~  117 (305)
                      .|+||++.+..
T Consensus       181 ~DivIn~t~~~  191 (272)
T 1p77_A          181 YDLVINATSAG  191 (272)
T ss_dssp             CSEEEECCCC-
T ss_pred             CCEEEECCCCC
Confidence            99999999863

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=97.48  E-value=0.0032  Score=55.53  Aligned_cols=144  Identities=13%  Similarity=0.059  Sum_probs=84.3

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCC--eEEEEec--Ccchhhh----Hhhh--cCCCCeEEEEecCCCHHHHHHHHHHHHH
Q 021960           33 VAIITGGARGIGEAAVRLFARHGA--KVVIADV--EDTLGSV----LAST--LAPAPVTFVHCDVSLEEDIENLINSTVS  102 (305)
Q Consensus        33 ~vlVtGas~giG~~ia~~l~~~g~--~vv~~~r--~~~~~~~----~~~~--~~~~~v~~~~~D~~d~~~i~~~~~~~~~  102 (305)
                      +++||||+|++|.+++..|+..|.  .++++++  ++.+.+.    +...  ..+..+.+...|  |  ++.+       
T Consensus         2 KI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~--d--~l~~-------   70 (313)
T 1hye_A            2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVES--D--ENLR-------   70 (313)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEE--T--TCGG-------
T ss_pred             EEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCC--c--chHH-------
Confidence            689999999999999999998875  5788887  5432211    1111  111122222211  0  1111       


Q ss_pred             hcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccc--------c
Q 021960          103 RYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGV--------M  174 (305)
Q Consensus       103 ~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~--------~  174 (305)
                      .+...|+|||.||.....       ..+.   ...+..|+.....+.+.+...    ..+.|+++|.....        .
T Consensus        71 al~gaD~Vi~~Ag~~~~~-------g~~r---~dl~~~N~~i~~~i~~~i~~~----~~~~vlv~SNPv~~~t~~~~k~~  136 (313)
T 1hye_A           71 IIDESDVVIITSGVPRKE-------GMSR---MDLAKTNAKIVGKYAKKIAEI----CDTKIFVITNPVDVMTYKALVDS  136 (313)
T ss_dssp             GGTTCSEEEECCSCCCCT-------TCCH---HHHHHHHHHHHHHHHHHHHHH----CCCEEEECSSSHHHHHHHHHHHH
T ss_pred             HhCCCCEEEECCCCCCCC-------CCcH---HHHHHHHHHHHHHHHHHHHHh----CCeEEEEecCcHHHHHHHHHHhh
Confidence            223699999999964321       1233   344788888877777776553    24455555543332        1


Q ss_pred             CCCCCccchh-hHHHHHHHHHHHHHHHC
Q 021960          175 GGLGPHAYTA-SKHAIVGLTKNAACELG  201 (305)
Q Consensus       175 ~~~~~~~Y~~-sKaa~~~~~~~la~e~~  201 (305)
                      +.|..-.+|. +..-...+...+++.+.
T Consensus       137 ~~p~~rviG~gt~LD~~r~~~~la~~lg  164 (313)
T 1hye_A          137 KFERNQVFGLGTHLDSLRFKVAIAKFFG  164 (313)
T ss_dssp             CCCTTSEEECTTHHHHHHHHHHHHHHHT
T ss_pred             CcChhcEEEeCccHHHHHHHHHHHHHhC
Confidence            3444456777 66555666677777764

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=97.47  E-value=0.00034  Score=62.47  Aligned_cols=77  Identities=21%  Similarity=0.226  Sum_probs=54.8

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDI  109 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~  109 (305)
                      .|+++||+|+ |++|..++..+...|++|+.+++++.+.+.+.+ +...    ..+|.++.+-.+. +.+.   .+.+|+
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-lGa~----~~~d~~~~~~~~~-~~~~---~~~~d~  233 (339)
T 1rjw_A          164 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKE-LGAD----LVVNPLKEDAAKF-MKEK---VGGVHA  233 (339)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-TTCS----EEECTTTSCHHHH-HHHH---HSSEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-CCCC----EEecCCCccHHHH-HHHH---hCCCCE
Confidence            4789999999 889999999999999999999988777665543 3222    2257765322222 2222   257999


Q ss_pred             EEEcCCC
Q 021960          110 LYNNAGV  116 (305)
Q Consensus       110 li~nag~  116 (305)
                      +|.++|.
T Consensus       234 vid~~g~  240 (339)
T 1rjw_A          234 AVVTAVS  240 (339)
T ss_dssp             EEESSCC
T ss_pred             EEECCCC
Confidence            9999884

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=97.47  E-value=0.00021  Score=62.70  Aligned_cols=77  Identities=18%  Similarity=0.184  Sum_probs=54.5

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCC-eEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCC
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGA-KVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGR  106 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~-~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~  106 (305)
                      ++.+++++|+|+ ||+|++++..|++.|+ +|++++|+.++.+.+.+..... ..    ++.+.+++.       +....
T Consensus       138 ~l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~-~~----~~~~~~~~~-------~~~~~  204 (297)
T 2egg_A          138 TLDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDER-RS----AYFSLAEAE-------TRLAE  204 (297)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSS-SC----CEECHHHHH-------HTGGG
T ss_pred             CCCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhc-cC----ceeeHHHHH-------hhhcc
Confidence            467899999997 7999999999999998 8999999987766665554221 00    111222222       22346


Q ss_pred             ccEEEEcCCCC
Q 021960          107 LDILYNNAGVL  117 (305)
Q Consensus       107 id~li~nag~~  117 (305)
                      .|+||++.+..
T Consensus       205 aDivIn~t~~~  215 (297)
T 2egg_A          205 YDIIINTTSVG  215 (297)
T ss_dssp             CSEEEECSCTT
T ss_pred             CCEEEECCCCC
Confidence            89999998754

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=97.46  E-value=0.00028  Score=63.70  Aligned_cols=78  Identities=24%  Similarity=0.279  Sum_probs=55.7

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRL  107 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~i  107 (305)
                      .+.+++++|+|+ |++|++++..+...|++|++++|+..+.+.+.+... ..+..   +..+.+++.+.+.       ..
T Consensus       164 ~l~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~-~~~~~---~~~~~~~~~~~~~-------~~  231 (361)
T 1pjc_A          164 GVKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFG-SRVEL---LYSNSAEIETAVA-------EA  231 (361)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG-GGSEE---EECCHHHHHHHHH-------TC
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhC-ceeEe---eeCCHHHHHHHHc-------CC
Confidence            356799999999 999999999999999999999998877665544322 12222   2234444443332       68


Q ss_pred             cEEEEcCCCC
Q 021960          108 DILYNNAGVL  117 (305)
Q Consensus       108 d~li~nag~~  117 (305)
                      |+||++++..
T Consensus       232 DvVI~~~~~~  241 (361)
T 1pjc_A          232 DLLIGAVLVP  241 (361)
T ss_dssp             SEEEECCCCT
T ss_pred             CEEEECCCcC
Confidence            9999998853

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=97.44  E-value=0.00035  Score=61.47  Aligned_cols=38  Identities=18%  Similarity=0.297  Sum_probs=31.3

Q ss_pred             CCCCCE-EEEec-CC-----------------CchHHHHHHHHHHcCCeEEEEecCc
Q 021960           28 RLEGKV-AIITG-GA-----------------RGIGEAAVRLFARHGAKVVIADVED   65 (305)
Q Consensus        28 ~l~~k~-vlVtG-as-----------------~giG~~ia~~l~~~g~~vv~~~r~~   65 (305)
                      ++.||. ||||+ +|                 |-.|.++|+.++++|+.|+++.+..
T Consensus        33 ~l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~   89 (313)
T 1p9o_A           33 GAQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRAR   89 (313)
T ss_dssp             HHTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETT
T ss_pred             hhcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCC
Confidence            357777 99994 45                 5599999999999999999987743

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=97.43  E-value=0.00033  Score=61.45  Aligned_cols=73  Identities=19%  Similarity=0.237  Sum_probs=53.2

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCC-HHHHHHHHHHHHHhcCCcc
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSL-EEDIENLINSTVSRYGRLD  108 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d-~~~i~~~~~~~~~~~g~id  108 (305)
                      .|+++||+|++|++|..++..+...|++|+.+++++.+.+.+.+ +...    ..+|..+ .+    +.+.+    +.+|
T Consensus       125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-~ga~----~~~~~~~~~~----~~~~~----~~~d  191 (302)
T 1iz0_A          125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLA-LGAE----EAATYAEVPE----RAKAW----GGLD  191 (302)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHH-TTCS----EEEEGGGHHH----HHHHT----TSEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh-cCCC----EEEECCcchh----HHHHh----cCce
Confidence            58899999999999999999999999999999998777665543 3222    1245554 22    22222    4699


Q ss_pred             EEEEcCCC
Q 021960          109 ILYNNAGV  116 (305)
Q Consensus       109 ~li~nag~  116 (305)
                      ++|. +|.
T Consensus       192 ~vid-~g~  198 (302)
T 1iz0_A          192 LVLE-VRG  198 (302)
T ss_dssp             EEEE-CSC
T ss_pred             EEEE-CCH
Confidence            9999 874

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=97.43  E-value=0.00047  Score=61.72  Aligned_cols=78  Identities=17%  Similarity=0.262  Sum_probs=54.6

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDI  109 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~  109 (305)
                      .|++|||+||+|++|...+..+...|++|+++++++.+.+.+.+ +...    ..+|..+  +..+.+.+.  ..+.+|+
T Consensus       150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~-lGa~----~vi~~~~--~~~~~~~~~--~~~g~Dv  220 (346)
T 3fbg_A          150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKK-MGAD----IVLNHKE--SLLNQFKTQ--GIELVDY  220 (346)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHH-HTCS----EEECTTS--CHHHHHHHH--TCCCEEE
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-cCCc----EEEECCc--cHHHHHHHh--CCCCccE
Confidence            58999999999999999999998999999999998777666554 3222    1234443  222222222  2236999


Q ss_pred             EEEcCCC
Q 021960          110 LYNNAGV  116 (305)
Q Consensus       110 li~nag~  116 (305)
                      +|.++|.
T Consensus       221 v~d~~g~  227 (346)
T 3fbg_A          221 VFCTFNT  227 (346)
T ss_dssp             EEESSCH
T ss_pred             EEECCCc
Confidence            9999873

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=97.40  E-value=0.00058  Score=61.66  Aligned_cols=75  Identities=20%  Similarity=0.256  Sum_probs=55.4

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDI  109 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~  109 (305)
                      .|++|||+|+ |+||..++..+...|++|+++++++.+.+...+.+...    ..+|..+.+.+++       ..+.+|+
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa~----~v~~~~~~~~~~~-------~~~~~D~  254 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGAD----SFLVSRDQEQMQA-------AAGTLDG  254 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCCS----EEEETTCHHHHHH-------TTTCEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCc----eEEeccCHHHHHH-------hhCCCCE
Confidence            6889999996 99999999999899999999998877766554344322    2246666543332       2247999


Q ss_pred             EEEcCCC
Q 021960          110 LYNNAGV  116 (305)
Q Consensus       110 li~nag~  116 (305)
                      +|.++|.
T Consensus       255 vid~~g~  261 (366)
T 1yqd_A          255 IIDTVSA  261 (366)
T ss_dssp             EEECCSS
T ss_pred             EEECCCc
Confidence            9999985

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.39  E-value=0.00026  Score=57.24  Aligned_cols=78  Identities=13%  Similarity=0.106  Sum_probs=56.9

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHc-CCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCC
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARH-GAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGR  106 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~-g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~  106 (305)
                      ++.++.++|.|+ |.+|..+++.|.+. |++|+++++++...+.+.+.    .+..+..|.++.+.+.++     .....
T Consensus        36 ~~~~~~v~IiG~-G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~----g~~~~~gd~~~~~~l~~~-----~~~~~  105 (183)
T 3c85_A           36 NPGHAQVLILGM-GRIGTGAYDELRARYGKISLGIEIREEAAQQHRSE----GRNVISGDATDPDFWERI-----LDTGH  105 (183)
T ss_dssp             CCTTCSEEEECC-SHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHHT----TCCEEECCTTCHHHHHTB-----CSCCC
T ss_pred             CCCCCcEEEECC-CHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHHC----CCCEEEcCCCCHHHHHhc-----cCCCC
Confidence            455778889984 99999999999999 99999999987765554322    255677899987654432     01236


Q ss_pred             ccEEEEcCC
Q 021960          107 LDILYNNAG  115 (305)
Q Consensus       107 id~li~nag  115 (305)
                      .|.||.+.+
T Consensus       106 ad~vi~~~~  114 (183)
T 3c85_A          106 VKLVLLAMP  114 (183)
T ss_dssp             CCEEEECCS
T ss_pred             CCEEEEeCC
Confidence            899998765

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=97.39  E-value=0.00028  Score=63.10  Aligned_cols=76  Identities=25%  Similarity=0.451  Sum_probs=51.3

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDI  109 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~  109 (305)
                      .|++|||+||+|+||..++..+...|++|+++ +++.+.+.+.+ +. .  ..  +| .+.+ +.+.+.+.... ..+|+
T Consensus       150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~~~-lG-a--~~--i~-~~~~-~~~~~~~~~~~-~g~D~  219 (343)
T 3gaz_A          150 DGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYVRD-LG-A--TP--ID-ASRE-PEDYAAEHTAG-QGFDL  219 (343)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHHHH-HT-S--EE--EE-TTSC-HHHHHHHHHTT-SCEEE
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHHHH-cC-C--CE--ec-cCCC-HHHHHHHHhcC-CCceE
Confidence            58899999999999999999999999999988 66665554433 32 2  22  44 3322 22222222211 25999


Q ss_pred             EEEcCC
Q 021960          110 LYNNAG  115 (305)
Q Consensus       110 li~nag  115 (305)
                      +|.++|
T Consensus       220 vid~~g  225 (343)
T 3gaz_A          220 VYDTLG  225 (343)
T ss_dssp             EEESSC
T ss_pred             EEECCC
Confidence            999988

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=97.37  E-value=0.00058  Score=61.12  Aligned_cols=77  Identities=17%  Similarity=0.299  Sum_probs=53.9

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCC-eEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcC--C
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGA-KVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYG--R  106 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~-~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g--~  106 (305)
                      .|+++||+|+ |++|..+++.+...|+ +|+++++++.+.+.+.+ +...    ..+|..+.+    +.+++.+..+  .
T Consensus       167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~-~Ga~----~~~~~~~~~----~~~~v~~~~~g~g  236 (348)
T 2d8a_A          167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKK-VGAD----YVINPFEED----VVKEVMDITDGNG  236 (348)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHH-HTCS----EEECTTTSC----HHHHHHHHTTTSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-hCCC----EEECCCCcC----HHHHHHHHcCCCC
Confidence            7899999999 9999999999889999 89999988776665543 3222    124655432    2223333222  5


Q ss_pred             ccEEEEcCCC
Q 021960          107 LDILYNNAGV  116 (305)
Q Consensus       107 id~li~nag~  116 (305)
                      +|++|.++|.
T Consensus       237 ~D~vid~~g~  246 (348)
T 2d8a_A          237 VDVFLEFSGA  246 (348)
T ss_dssp             EEEEEECSCC
T ss_pred             CCEEEECCCC
Confidence            9999999883

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.32  E-value=0.00085  Score=51.76  Aligned_cols=73  Identities=15%  Similarity=0.064  Sum_probs=55.8

Q ss_pred             CEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEEE
Q 021960           32 KVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILY  111 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~li  111 (305)
                      +.++|.|+ |.+|..+++.|.+.|++|+++++++...+.+.+    ..+.++..|.++.+.++++      .....|.+|
T Consensus         8 ~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~----~g~~~i~gd~~~~~~l~~a------~i~~ad~vi   76 (140)
T 3fwz_A            8 NHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDELRE----RGVRAVLGNAANEEIMQLA------HLECAKWLI   76 (140)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----TTCEEEESCTTSHHHHHHT------TGGGCSEEE
T ss_pred             CCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH----cCCCEEECCCCCHHHHHhc------CcccCCEEE
Confidence            45788886 899999999999999999999999877665543    2367788999998765543      112578888


Q ss_pred             EcCC
Q 021960          112 NNAG  115 (305)
Q Consensus       112 ~nag  115 (305)
                      .+.+
T Consensus        77 ~~~~   80 (140)
T 3fwz_A           77 LTIP   80 (140)
T ss_dssp             ECCS
T ss_pred             EECC
Confidence            7655

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=97.27  E-value=0.0035  Score=55.05  Aligned_cols=141  Identities=12%  Similarity=0.008  Sum_probs=76.4

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCC--eEEEEec--CcchhhhHhhhc-----CCCCeEEEEecCCCHHHHHHHHHHHHHh
Q 021960           33 VAIITGGARGIGEAAVRLFARHGA--KVVIADV--EDTLGSVLASTL-----APAPVTFVHCDVSLEEDIENLINSTVSR  103 (305)
Q Consensus        33 ~vlVtGas~giG~~ia~~l~~~g~--~vv~~~r--~~~~~~~~~~~~-----~~~~v~~~~~D~~d~~~i~~~~~~~~~~  103 (305)
                      +++||||+|.+|.+++..|+..|.  .++++++  ++.+.+.....+     ....+.+.. +  +.           +.
T Consensus         2 KI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~-~--~~-----------~a   67 (303)
T 1o6z_A            2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ-G--GY-----------ED   67 (303)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE-C--CG-----------GG
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe-C--CH-----------HH
Confidence            689999999999999999998875  5888887  543322111110     011222222 1  21           11


Q ss_pred             cCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCC-CEEEEecccccc--------c
Q 021960          104 YGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGG-GCIISTASVAGV--------M  174 (305)
Q Consensus       104 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~iv~isS~~~~--------~  174 (305)
                      +...|+|||.||.....       ..+..   ..+..|+.....+.+.+.    +... +.|+++|-....        .
T Consensus        68 ~~~aDvVi~~ag~~~~~-------g~~r~---dl~~~N~~i~~~i~~~i~----~~~p~~~viv~SNPv~~~~~~~~~~~  133 (303)
T 1o6z_A           68 TAGSDVVVITAGIPRQP-------GQTRI---DLAGDNAPIMEDIQSSLD----EHNDDYISLTTSNPVDLLNRHLYEAG  133 (303)
T ss_dssp             GTTCSEEEECCCCCCCT-------TCCHH---HHHHHHHHHHHHHHHHHH----TTCSCCEEEECCSSHHHHHHHHHHHS
T ss_pred             hCCCCEEEEcCCCCCCC-------CCCHH---HHHHHHHHHHHHHHHHHH----HHCCCcEEEEeCChHHHHHHHHHHHc
Confidence            23689999999964321       12333   347788877655555543    3443 444444433222        1


Q ss_pred             CCCCCccchh-hHHHHHHHHHHHHHHHC
Q 021960          175 GGLGPHAYTA-SKHAIVGLTKNAACELG  201 (305)
Q Consensus       175 ~~~~~~~Y~~-sKaa~~~~~~~la~e~~  201 (305)
                      +.|..-..|. +..=...+-..++..+.
T Consensus       134 ~~p~~rviG~gt~Ld~~r~~~~la~~l~  161 (303)
T 1o6z_A          134 DRSREQVIGFGGRLDSARFRYVLSEEFD  161 (303)
T ss_dssp             SSCGGGEEECCHHHHHHHHHHHHHHHHT
T ss_pred             CCCHHHeeecccchhHHHHHHHHHHHhC
Confidence            2333344555 33323455555666654

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=97.26  E-value=0.0021  Score=57.59  Aligned_cols=81  Identities=20%  Similarity=0.139  Sum_probs=52.5

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCC-HHHHHHHHHHHHH-hcCCc
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSL-EEDIENLINSTVS-RYGRL  107 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d-~~~i~~~~~~~~~-~~g~i  107 (305)
                      .|++|||+|+ |++|...+..+...|++|+++++++.+.+.+.+ +...    ..+|..+ .+..+++.+...+ ..+.+
T Consensus       168 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~-lGa~----~~~~~~~~~~~~~~i~~~~~~~~g~g~  241 (352)
T 1e3j_A          168 LGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKN-CGAD----VTLVVDPAKEEESSIIERIRSAIGDLP  241 (352)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-TTCS----EEEECCTTTSCHHHHHHHHHHHSSSCC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHH-hCCC----EEEcCcccccHHHHHHHHhccccCCCC
Confidence            5789999997 899999998888899999888888777665543 3222    1234443 2222222221110 01359


Q ss_pred             cEEEEcCCC
Q 021960          108 DILYNNAGV  116 (305)
Q Consensus       108 d~li~nag~  116 (305)
                      |++|.++|.
T Consensus       242 D~vid~~g~  250 (352)
T 1e3j_A          242 NVTIDCSGN  250 (352)
T ss_dssp             SEEEECSCC
T ss_pred             CEEEECCCC
Confidence            999999884

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=97.20  E-value=0.0009  Score=60.55  Aligned_cols=76  Identities=20%  Similarity=0.257  Sum_probs=51.6

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDI  109 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~  109 (305)
                      .|++|||+||+|+||..++..+...|++|+.+++ +.+.+.+ +.+...    ..+|..+.+-    .+++.+. +.+|+
T Consensus       183 ~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~-~~~~~~~-~~lGa~----~v~~~~~~~~----~~~~~~~-~g~D~  251 (375)
T 2vn8_A          183 TGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCS-QDASELV-RKLGAD----DVIDYKSGSV----EEQLKSL-KPFDF  251 (375)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-GGGHHHH-HHTTCS----EEEETTSSCH----HHHHHTS-CCBSE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEeC-hHHHHHH-HHcCCC----EEEECCchHH----HHHHhhc-CCCCE
Confidence            5889999999999999999888889999988874 4444443 333222    1235554322    2233322 46999


Q ss_pred             EEEcCCC
Q 021960          110 LYNNAGV  116 (305)
Q Consensus       110 li~nag~  116 (305)
                      +|.++|.
T Consensus       252 vid~~g~  258 (375)
T 2vn8_A          252 ILDNVGG  258 (375)
T ss_dssp             EEESSCT
T ss_pred             EEECCCC
Confidence            9999984

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=97.16  E-value=0.0026  Score=57.38  Aligned_cols=79  Identities=18%  Similarity=0.228  Sum_probs=53.3

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCC-eEEEEecCcchhhhHhhhcCCCCeEEEEecCCC-HHHHHHHHHHHHHhcCCc
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGA-KVVIADVEDTLGSVLASTLAPAPVTFVHCDVSL-EEDIENLINSTVSRYGRL  107 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~-~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d-~~~i~~~~~~~~~~~g~i  107 (305)
                      .|++|||+|+ |++|...+..+...|+ +|+.+++++.+.+.+.+ +...    ..+|..+ .+++.+.+.++..  +.+
T Consensus       192 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~-lGa~----~vi~~~~~~~~~~~~~~~~~~--~g~  263 (374)
T 1cdo_A          192 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKV-FGAT----DFVNPNDHSEPISQVLSKMTN--GGV  263 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-TTCC----EEECGGGCSSCHHHHHHHHHT--SCB
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH-hCCc----eEEeccccchhHHHHHHHHhC--CCC
Confidence            4789999996 9999999988888999 78888888877665543 3222    1235442 1223333333322  369


Q ss_pred             cEEEEcCCC
Q 021960          108 DILYNNAGV  116 (305)
Q Consensus       108 d~li~nag~  116 (305)
                      |++|.++|.
T Consensus       264 D~vid~~g~  272 (374)
T 1cdo_A          264 DFSLECVGN  272 (374)
T ss_dssp             SEEEECSCC
T ss_pred             CEEEECCCC
Confidence            999999884

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=97.16  E-value=0.0071  Score=54.15  Aligned_cols=79  Identities=18%  Similarity=0.289  Sum_probs=52.3

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCC-eEEEEecCcchhhhHhhhcCCCCeEEEEecCC--CHHHHHHHHHHHHHhcCC
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGA-KVVIADVEDTLGSVLASTLAPAPVTFVHCDVS--LEEDIENLINSTVSRYGR  106 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~-~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~--d~~~i~~~~~~~~~~~g~  106 (305)
                      .|++|||+|+ |++|...+..+...|+ +|+++++++.+.+.+.+ +...    ..+|..  |.++..+.+.+...  +.
T Consensus       171 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~-lGa~----~vi~~~~~~~~~~~~~i~~~~~--~g  242 (356)
T 1pl8_A          171 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKE-IGAD----LVLQISKESPQEIARKVEGQLG--CK  242 (356)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH-TTCS----EEEECSSCCHHHHHHHHHHHHT--SC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-hCCC----EEEcCcccccchHHHHHHHHhC--CC
Confidence            4789999996 8999999988888999 89999888776665543 3222    123554  22222222222221  46


Q ss_pred             ccEEEEcCCC
Q 021960          107 LDILYNNAGV  116 (305)
Q Consensus       107 id~li~nag~  116 (305)
                      +|++|.++|.
T Consensus       243 ~D~vid~~g~  252 (356)
T 1pl8_A          243 PEVTIECTGA  252 (356)
T ss_dssp             CSEEEECSCC
T ss_pred             CCEEEECCCC
Confidence            9999999883

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=97.07  E-value=0.0027  Score=55.32  Aligned_cols=102  Identities=13%  Similarity=0.214  Sum_probs=56.4

Q ss_pred             CcceeeeccCCCC--------CCCCCCCCEEEEecCCCchHHHHHHHHHHcCC-eEEEEecCc-----------------
Q 021960           12 QGIHVLAWDDAPP--------SHRRLEGKVAIITGGARGIGEAAVRLFARHGA-KVVIADVED-----------------   65 (305)
Q Consensus        12 ~~~~~~~~~~~~~--------~~~~l~~k~vlVtGas~giG~~ia~~l~~~g~-~vv~~~r~~-----------------   65 (305)
                      -+...++|++...        ....+.+++|+|.|+ ||+|..+++.|+..|. ++.++|.+.                 
T Consensus         9 ~~~~~~~y~r~i~L~~~G~~~~q~kL~~~~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG   87 (292)
T 3h8v_A            9 HHSSGLVPRGSMALKRMGIVSDYEKIRTFAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAG   87 (292)
T ss_dssp             -----------------------CGGGGCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTT
T ss_pred             cccCCCCchHhhcccccChHHHHHHHhCCeEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcC
Confidence            3444566665422        123456789999996 7999999999999997 577776543                 


Q ss_pred             -chhhhHhhhc----CCCCeEEEEecCCCHHHHHHHHHHHHHh----cCCccEEEEcC
Q 021960           66 -TLGSVLASTL----APAPVTFVHCDVSLEEDIENLINSTVSR----YGRLDILYNNA  114 (305)
Q Consensus        66 -~~~~~~~~~~----~~~~v~~~~~D~~d~~~i~~~~~~~~~~----~g~id~li~na  114 (305)
                       .+.+.+++.+    ...++..+..++++.+.++.+++.+...    ....|+||.+.
T Consensus        88 ~~Ka~aa~~~L~~iNP~v~v~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~  145 (292)
T 3h8v_A           88 LSKVQAAEHTLRNINPDVLFEVHNYNITTVENFQHFMDRISNGGLEEGKPVDLVLSCV  145 (292)
T ss_dssp             SBHHHHHHHHHHHHCTTSEEEEECCCTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECC
T ss_pred             chHHHHHHHHHHhhCCCcEEEEecccCCcHHHHHHHhhhhcccccccCCCCCEEEECC
Confidence             2222222221    3345666666777666676666544321    13578888653

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=97.05  E-value=0.0038  Score=56.29  Aligned_cols=79  Identities=14%  Similarity=0.258  Sum_probs=52.7

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCC-eEEEEecCcchhhhHhhhcCCCCeEEEEecCCC-HHHHHHHHHHHHHhcCCc
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGA-KVVIADVEDTLGSVLASTLAPAPVTFVHCDVSL-EEDIENLINSTVSRYGRL  107 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~-~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d-~~~i~~~~~~~~~~~g~i  107 (305)
                      .|++|||+|+ |++|...+..+...|+ +|+.+++++.+.+.+.+ +...    ..+|..+ .+++.+.+.++..  +.+
T Consensus       191 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~-lGa~----~vi~~~~~~~~~~~~~~~~~~--~g~  262 (374)
T 2jhf_A          191 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKE-VGAT----ECVNPQDYKKPIQEVLTEMSN--GGV  262 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-TTCS----EEECGGGCSSCHHHHHHHHTT--SCB
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH-hCCc----eEecccccchhHHHHHHHHhC--CCC
Confidence            4789999995 8999999998888999 78888888777665543 3222    1235442 1223333333222  369


Q ss_pred             cEEEEcCCC
Q 021960          108 DILYNNAGV  116 (305)
Q Consensus       108 d~li~nag~  116 (305)
                      |++|.++|.
T Consensus       263 D~vid~~g~  271 (374)
T 2jhf_A          263 DFSFEVIGR  271 (374)
T ss_dssp             SEEEECSCC
T ss_pred             cEEEECCCC
Confidence            999999884

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=97.03  E-value=0.0014  Score=54.47  Aligned_cols=73  Identities=23%  Similarity=0.235  Sum_probs=56.2

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEEEE
Q 021960           33 VAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILYN  112 (305)
Q Consensus        33 ~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~li~  112 (305)
                      .++|.|+ |.+|..+++.|.++|++|+++++++...+.+.+..   .+.++..|.+|.+.+++.      .....|.+|.
T Consensus         2 ~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~---~~~~i~gd~~~~~~l~~a------~i~~ad~vi~   71 (218)
T 3l4b_C            2 KVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKL---KATIIHGDGSHKEILRDA------EVSKNDVVVI   71 (218)
T ss_dssp             CEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHS---SSEEEESCTTSHHHHHHH------TCCTTCEEEE
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHc---CCeEEEcCCCCHHHHHhc------CcccCCEEEE
Confidence            5789996 89999999999999999999999877666544332   366789999998766543      1236788887


Q ss_pred             cCC
Q 021960          113 NAG  115 (305)
Q Consensus       113 nag  115 (305)
                      +.+
T Consensus        72 ~~~   74 (218)
T 3l4b_C           72 LTP   74 (218)
T ss_dssp             CCS
T ss_pred             ecC
Confidence            654

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=97.01  E-value=0.0015  Score=58.35  Aligned_cols=77  Identities=19%  Similarity=0.250  Sum_probs=53.6

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCC-eEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGA-KVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLD  108 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~-~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id  108 (305)
                      .|+++||+|+ |++|..++..+...|+ +|+.+++++.+.+.+.+.  ..    ..+|..+. ++.+.+.++.  ...+|
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l--a~----~v~~~~~~-~~~~~~~~~~--~~g~D  233 (343)
T 2dq4_A          164 SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY--AD----RLVNPLEE-DLLEVVRRVT--GSGVE  233 (343)
T ss_dssp             TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT--CS----EEECTTTS-CHHHHHHHHH--SSCEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh--HH----hccCcCcc-CHHHHHHHhc--CCCCC
Confidence            6889999999 9999999998888999 899999887665554332  22    22465542 2233333332  23699


Q ss_pred             EEEEcCCC
Q 021960          109 ILYNNAGV  116 (305)
Q Consensus       109 ~li~nag~  116 (305)
                      ++|.++|.
T Consensus       234 ~vid~~g~  241 (343)
T 2dq4_A          234 VLLEFSGN  241 (343)
T ss_dssp             EEEECSCC
T ss_pred             EEEECCCC
Confidence            99999883

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=97.00  E-value=0.00072  Score=59.91  Aligned_cols=75  Identities=19%  Similarity=0.168  Sum_probs=49.4

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEEEE
Q 021960           33 VAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILYN  112 (305)
Q Consensus        33 ~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~li~  112 (305)
                      ++||+||+|++|...+..+...|++|+.+++++.+.+.+.+ +... .   .+|..+.+  .+.++++.  .+.+|++|.
T Consensus       152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~-lGa~-~---~i~~~~~~--~~~~~~~~--~~~~d~vid  222 (328)
T 1xa0_A          152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRV-LGAK-E---VLAREDVM--AERIRPLD--KQRWAAAVD  222 (328)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHH-TTCS-E---EEECC-----------CC--SCCEEEEEE
T ss_pred             eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-cCCc-E---EEecCCcH--HHHHHHhc--CCcccEEEE
Confidence            79999999999999999888899999999988776665543 3222 1   23555432  12222221  136999999


Q ss_pred             cCCC
Q 021960          113 NAGV  116 (305)
Q Consensus       113 nag~  116 (305)
                      ++|.
T Consensus       223 ~~g~  226 (328)
T 1xa0_A          223 PVGG  226 (328)
T ss_dssp             CSTT
T ss_pred             CCcH
Confidence            9884

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=96.98  E-value=0.0023  Score=54.59  Aligned_cols=79  Identities=20%  Similarity=0.325  Sum_probs=53.1

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCC-eEEEEecCc-------------------chhhhHhhhc----CCCCeEEE
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGA-KVVIADVED-------------------TLGSVLASTL----APAPVTFV   83 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~-~vv~~~r~~-------------------~~~~~~~~~~----~~~~v~~~   83 (305)
                      .+.+++|+|.|+ ||+|..+++.|+..|. ++.+++++.                   .+.+.+++.+    ...++..+
T Consensus        28 ~l~~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~  106 (249)
T 1jw9_B           28 ALKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPV  106 (249)
T ss_dssp             HHHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred             HHhCCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEE
Confidence            456789999996 7999999999999998 788888775                   3433333322    22345555


Q ss_pred             EecCCCHHHHHHHHHHHHHhcCCccEEEEcCC
Q 021960           84 HCDVSLEEDIENLINSTVSRYGRLDILYNNAG  115 (305)
Q Consensus        84 ~~D~~d~~~i~~~~~~~~~~~g~id~li~nag  115 (305)
                      ..+++ .+.+.++++       ..|+||.+..
T Consensus       107 ~~~~~-~~~~~~~~~-------~~DvVi~~~d  130 (249)
T 1jw9_B          107 NALLD-DAELAALIA-------EHDLVLDCTD  130 (249)
T ss_dssp             CSCCC-HHHHHHHHH-------TSSEEEECCS
T ss_pred             eccCC-HhHHHHHHh-------CCCEEEEeCC
Confidence            55565 344444332       6899998754

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=96.98  E-value=0.0014  Score=56.63  Aligned_cols=74  Identities=20%  Similarity=0.313  Sum_probs=53.9

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCC-eEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCC
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGA-KVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGR  106 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~-~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~  106 (305)
                      ++++|+++|+|+ ||+|++++..|++.|+ +|++++|+.++.+.+.+.+....+..+  ++.+   +.       .  ..
T Consensus       117 ~l~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~--~~~~---l~-------~--~~  181 (272)
T 3pwz_A          117 PLRNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRLRIS--RYEA---LE-------G--QS  181 (272)
T ss_dssp             CCTTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCCTTEEEE--CSGG---GT-------T--CC
T ss_pred             CccCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhccCCeeEe--eHHH---hc-------c--cC
Confidence            568999999997 7999999999999996 899999998777766665543223332  3322   11       0  36


Q ss_pred             ccEEEEcCCC
Q 021960          107 LDILYNNAGV  116 (305)
Q Consensus       107 id~li~nag~  116 (305)
                      .|+||++...
T Consensus       182 ~DivInaTp~  191 (272)
T 3pwz_A          182 FDIVVNATSA  191 (272)
T ss_dssp             CSEEEECSSG
T ss_pred             CCEEEECCCC
Confidence            8999997643

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=96.98  E-value=0.00028  Score=54.76  Aligned_cols=70  Identities=16%  Similarity=0.211  Sum_probs=50.9

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEE
Q 021960           31 GKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDIL  110 (305)
Q Consensus        31 ~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~l  110 (305)
                      +++++|.|+ |++|+.+++.|.+.|++|++.+|+..+.+.+.+...   +...  +..+.   .+.++       ..|+|
T Consensus        21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~---~~~~--~~~~~---~~~~~-------~~Div   84 (144)
T 3oj0_A           21 GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYE---YEYV--LINDI---DSLIK-------NNDVI   84 (144)
T ss_dssp             CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHT---CEEE--ECSCH---HHHHH-------TCSEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhC---CceE--eecCH---HHHhc-------CCCEE
Confidence            789999996 999999999999999999999998877666555443   2221  23333   22222       58999


Q ss_pred             EEcCCC
Q 021960          111 YNNAGV  116 (305)
Q Consensus       111 i~nag~  116 (305)
                      |.+.+.
T Consensus        85 i~at~~   90 (144)
T 3oj0_A           85 ITATSS   90 (144)
T ss_dssp             EECSCC
T ss_pred             EEeCCC
Confidence            998764

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=96.93  E-value=0.0017  Score=58.41  Aligned_cols=78  Identities=18%  Similarity=0.253  Sum_probs=53.0

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDI  109 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~  109 (305)
                      .|++|||+| +|++|...+..+...|++|+++++++.+.+.+.+ +...    ..+| .+.+++.+.+.++... ..+|+
T Consensus       189 ~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~-lGa~----~vi~-~~~~~~~~~v~~~~~g-~g~D~  260 (363)
T 3uog_A          189 AGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDRAFA-LGAD----HGIN-RLEEDWVERVYALTGD-RGADH  260 (363)
T ss_dssp             TTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-HTCS----EEEE-TTTSCHHHHHHHHHTT-CCEEE
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHH-cCCC----EEEc-CCcccHHHHHHHHhCC-CCceE
Confidence            478999999 8999999998888899999999988777666543 3222    1234 3322233322222221 25999


Q ss_pred             EEEcCC
Q 021960          110 LYNNAG  115 (305)
Q Consensus       110 li~nag  115 (305)
                      +|.++|
T Consensus       261 vid~~g  266 (363)
T 3uog_A          261 ILEIAG  266 (363)
T ss_dssp             EEEETT
T ss_pred             EEECCC
Confidence            999998

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=96.89  E-value=0.0026  Score=56.55  Aligned_cols=77  Identities=21%  Similarity=0.253  Sum_probs=54.3

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDI  109 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~  109 (305)
                      .|+++||+|+ |++|...+..+...|++|+.+++++.+.+.+.+ +...    ..+|..+.+..+.+.    +..+.+|.
T Consensus       166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~-lGa~----~~i~~~~~~~~~~~~----~~~g~~d~  235 (340)
T 3s2e_A          166 PGQWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKLNLARR-LGAE----VAVNARDTDPAAWLQ----KEIGGAHG  235 (340)
T ss_dssp             TTSEEEEECC-STTHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-TTCS----EEEETTTSCHHHHHH----HHHSSEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH-cCCC----EEEeCCCcCHHHHHH----HhCCCCCE
Confidence            5889999997 899999998888899999999998877765543 3222    124555533333332    23357999


Q ss_pred             EEEcCCC
Q 021960          110 LYNNAGV  116 (305)
Q Consensus       110 li~nag~  116 (305)
                      +|.++|.
T Consensus       236 vid~~g~  242 (340)
T 3s2e_A          236 VLVTAVS  242 (340)
T ss_dssp             EEESSCC
T ss_pred             EEEeCCC
Confidence            9998873

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=96.85  E-value=0.00057  Score=59.30  Aligned_cols=43  Identities=12%  Similarity=0.099  Sum_probs=37.0

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCC-eEEEEecCcchhhhH
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGA-KVVIADVEDTLGSVL   71 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~-~vv~~~r~~~~~~~~   71 (305)
                      ++.+|+++|+|+ ||.|++++..|++.|+ +|.+++|+.++.+.+
T Consensus       114 ~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~l  157 (277)
T 3don_A          114 GIEDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNNW  157 (277)
T ss_dssp             TGGGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTTC
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHH
Confidence            467899999997 7999999999999999 899999987665443

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=96.79  E-value=0.0039  Score=56.26  Aligned_cols=74  Identities=18%  Similarity=0.289  Sum_probs=53.8

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDI  109 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~  109 (305)
                      .|.+|||+|+ |++|...+..+...|++|+++++++.+.+.+.+ +...    ..+|..+.+.+++    +.   +.+|+
T Consensus       194 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~-lGa~----~vi~~~~~~~~~~----~~---~g~Dv  260 (369)
T 1uuf_A          194 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKA-LGAD----EVVNSRNADEMAA----HL---KSFDF  260 (369)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-HTCS----EEEETTCHHHHHT----TT---TCEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCCc----EEeccccHHHHHH----hh---cCCCE
Confidence            4789999998 899999998888899999999988877666544 3322    2246666543322    21   46999


Q ss_pred             EEEcCCC
Q 021960          110 LYNNAGV  116 (305)
Q Consensus       110 li~nag~  116 (305)
                      +|.++|.
T Consensus       261 vid~~g~  267 (369)
T 1uuf_A          261 ILNTVAA  267 (369)
T ss_dssp             EEECCSS
T ss_pred             EEECCCC
Confidence            9999885

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=96.79  E-value=0.0029  Score=56.82  Aligned_cols=75  Identities=17%  Similarity=0.170  Sum_probs=53.9

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDI  109 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~  109 (305)
                      .|++|||+|+ |++|...+..+...|++|+++++++.+.+.+.+.+....+    +|..+.+.++       +..+.+|+
T Consensus       180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lGa~~v----i~~~~~~~~~-------~~~~g~D~  247 (357)
T 2cf5_A          180 PGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDY----VIGSDQAKMS-------ELADSLDY  247 (357)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTSCCSCE----EETTCHHHHH-------HSTTTEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHcCCcee----eccccHHHHH-------HhcCCCCE
Confidence            6889999995 9999999988888899999999887776655534432222    3555543332       22246999


Q ss_pred             EEEcCCC
Q 021960          110 LYNNAGV  116 (305)
Q Consensus       110 li~nag~  116 (305)
                      +|.++|.
T Consensus       248 vid~~g~  254 (357)
T 2cf5_A          248 VIDTVPV  254 (357)
T ss_dssp             EEECCCS
T ss_pred             EEECCCC
Confidence            9999985

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=96.74  E-value=0.0071  Score=53.34  Aligned_cols=115  Identities=19%  Similarity=0.191  Sum_probs=66.4

Q ss_pred             EEEEecCCCchHHHHHHHHHHcC--CeEEEEecCcchhhhHhhhcCC---CCeEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 021960           33 VAIITGGARGIGEAAVRLFARHG--AKVVIADVEDTLGSVLASTLAP---APVTFVHCDVSLEEDIENLINSTVSRYGRL  107 (305)
Q Consensus        33 ~vlVtGas~giG~~ia~~l~~~g--~~vv~~~r~~~~~~~~~~~~~~---~~v~~~~~D~~d~~~i~~~~~~~~~~~g~i  107 (305)
                      ++.|+||+|.+|..++..|+..|  ..|+++++++... ...+....   .++....    ...+.++.+       ..-
T Consensus         2 KI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~~~~-~a~dL~~~~~~~~l~~~~----~t~d~~~a~-------~~a   69 (314)
T 1mld_A            2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPG-VAADLSHIETRATVKGYL----GPEQLPDCL-------KGC   69 (314)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHH-HHHHHTTSSSSCEEEEEE----SGGGHHHHH-------TTC
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCccHH-HHHHHhccCcCceEEEec----CCCCHHHHh-------CCC
Confidence            58999999999999999999888  6799999987222 11111111   1121110    011222222       368


Q ss_pred             cEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEeccccc
Q 021960          108 DILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAG  172 (305)
Q Consensus       108 d~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~  172 (305)
                      |++|+.+|.....+       .+..   ..+..|+.....+.+.+.+.   ...+.|+++|-...
T Consensus        70 DvVvi~ag~~~~~g-------~~r~---dl~~~n~~i~~~i~~~i~~~---~p~a~viv~sNPv~  121 (314)
T 1mld_A           70 DVVVIPAGVPRKPG-------MTRD---DLFNTNATIVATLTAACAQH---CPDAMICIISNPVN  121 (314)
T ss_dssp             SEEEECCSCCCCTT-------CCGG---GGHHHHHHHHHHHHHHHHHH---CTTSEEEECSSCHH
T ss_pred             CEEEECCCcCCCCC-------CcHH---HHHHHHHHHHHHHHHHHHhh---CCCeEEEEECCCcc
Confidence            99999999753211       1111   13566666554555554443   35578888765433

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=96.74  E-value=0.004  Score=55.92  Aligned_cols=78  Identities=19%  Similarity=0.220  Sum_probs=53.5

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHc-CCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARH-GAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLD  108 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~-g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id  108 (305)
                      .|++|||+|+ |++|...+..+... |++|+.+++++.+.+.+.+ +...    ..+|..+.  +.+.++++.. ...+|
T Consensus       186 ~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~~-lGa~----~vi~~~~~--~~~~v~~~~~-g~g~D  256 (359)
T 1h2b_A          186 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAER-LGAD----HVVDARRD--PVKQVMELTR-GRGVN  256 (359)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHH-TTCS----EEEETTSC--HHHHHHHHTT-TCCEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH-hCCC----EEEeccch--HHHHHHHHhC-CCCCc
Confidence            5789999999 89999999888888 9999999988777665543 3222    12465553  3232222211 11599


Q ss_pred             EEEEcCCC
Q 021960          109 ILYNNAGV  116 (305)
Q Consensus       109 ~li~nag~  116 (305)
                      ++|.++|.
T Consensus       257 vvid~~G~  264 (359)
T 1h2b_A          257 VAMDFVGS  264 (359)
T ss_dssp             EEEESSCC
T ss_pred             EEEECCCC
Confidence            99999884

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=96.73  E-value=0.003  Score=57.79  Aligned_cols=73  Identities=16%  Similarity=0.312  Sum_probs=52.0

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCC-eEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCC
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGA-KVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGR  106 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~-~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~  106 (305)
                      ++.|++++|.|+ |++|+.+++.|...|+ +|++++|+..+.+.+.+.+.   ...  .+..   ++.+.+       ..
T Consensus       164 ~l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g---~~~--~~~~---~l~~~l-------~~  227 (404)
T 1gpj_A          164 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLG---GEA--VRFD---ELVDHL-------AR  227 (404)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHT---CEE--CCGG---GHHHHH-------HT
T ss_pred             cccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcC---Cce--ecHH---hHHHHh-------cC
Confidence            467999999998 9999999999999999 89999998766544444332   111  2332   233332       25


Q ss_pred             ccEEEEcCCC
Q 021960          107 LDILYNNAGV  116 (305)
Q Consensus       107 id~li~nag~  116 (305)
                      .|+||.+.+.
T Consensus       228 aDvVi~at~~  237 (404)
T 1gpj_A          228 SDVVVSATAA  237 (404)
T ss_dssp             CSEEEECCSS
T ss_pred             CCEEEEccCC
Confidence            8999998764

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=96.71  E-value=0.0021  Score=57.81  Aligned_cols=75  Identities=16%  Similarity=0.144  Sum_probs=52.5

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDI  109 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~  109 (305)
                      .|++|||+|+ |++|...+..+...|++|+.+++++.+.+.+.+ +... . +  +|..+..   ++.+++.   +.+|+
T Consensus       179 ~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~-lGa~-~-v--~~~~~~~---~~~~~~~---~~~D~  246 (360)
T 1piw_A          179 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMK-MGAD-H-Y--IATLEEG---DWGEKYF---DTFDL  246 (360)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH-HTCS-E-E--EEGGGTS---CHHHHSC---SCEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH-cCCC-E-E--EcCcCch---HHHHHhh---cCCCE
Confidence            5789999999 999999998888899999999988877766544 3222 1 1  3443320   1122221   47999


Q ss_pred             EEEcCCC
Q 021960          110 LYNNAGV  116 (305)
Q Consensus       110 li~nag~  116 (305)
                      +|.++|.
T Consensus       247 vid~~g~  253 (360)
T 1piw_A          247 IVVCASS  253 (360)
T ss_dssp             EEECCSC
T ss_pred             EEECCCC
Confidence            9999985

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=96.68  E-value=0.002  Score=55.97  Aligned_cols=73  Identities=14%  Similarity=0.260  Sum_probs=52.2

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCC-eEEEEecCcchhhhHhhhcCC-CCeEEEEecCCCHHHHHHHHHHHHHhcC
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGA-KVVIADVEDTLGSVLASTLAP-APVTFVHCDVSLEEDIENLINSTVSRYG  105 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~-~vv~~~r~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~i~~~~~~~~~~~g  105 (305)
                      ++.+|+++|+|+ ||+|++++..|++.|+ +|.+++|+..+.+.+.+.... ..+...  ++.+   +.          .
T Consensus       123 ~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~--~~~~---l~----------~  186 (281)
T 3o8q_A          123 LLKGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQ--AFEQ---LK----------Q  186 (281)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEEEE--EGGG---CC----------S
T ss_pred             CccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCCeeEe--eHHH---hc----------C
Confidence            568999999997 7999999999999997 899999988776665554422 123333  2211   10          3


Q ss_pred             CccEEEEcCCC
Q 021960          106 RLDILYNNAGV  116 (305)
Q Consensus       106 ~id~li~nag~  116 (305)
                      ..|+||++...
T Consensus       187 ~aDiIInaTp~  197 (281)
T 3o8q_A          187 SYDVIINSTSA  197 (281)
T ss_dssp             CEEEEEECSCC
T ss_pred             CCCEEEEcCcC
Confidence            68999987654

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=96.64  E-value=0.026  Score=48.74  Aligned_cols=39  Identities=18%  Similarity=0.123  Sum_probs=33.0

Q ss_pred             CEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhH
Q 021960           32 KVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVL   71 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~   71 (305)
                      +++.|.|+ |.+|..+|..|++.|++|++.+++++..+..
T Consensus         5 ~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~   43 (283)
T 4e12_A            5 TNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDINTDALDAA   43 (283)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHH
Confidence            67888885 8899999999999999999999987665443

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=96.63  E-value=0.0036  Score=56.29  Aligned_cols=77  Identities=19%  Similarity=0.254  Sum_probs=52.2

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHH-cCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhc-CCc
Q 021960           30 EGKVAIITGGARGIGEAAVRLFAR-HGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRY-GRL  107 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~-~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~-g~i  107 (305)
                      .|++|||+||+|++|...+..+.. .|++|+.+++++.+.+.+.+ +...    ..+|..+  +   +.+++.+.. +.+
T Consensus       171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~-lGad----~vi~~~~--~---~~~~v~~~~~~g~  240 (363)
T 4dvj_A          171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKS-LGAH----HVIDHSK--P---LAAEVAALGLGAP  240 (363)
T ss_dssp             SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHH-TTCS----EEECTTS--C---HHHHHHTTCSCCE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHH-cCCC----EEEeCCC--C---HHHHHHHhcCCCc
Confidence            578999999999999888766655 58999999998777666543 3222    1235443  1   223333332 369


Q ss_pred             cEEEEcCCC
Q 021960          108 DILYNNAGV  116 (305)
Q Consensus       108 d~li~nag~  116 (305)
                      |++|.++|.
T Consensus       241 Dvvid~~g~  249 (363)
T 4dvj_A          241 AFVFSTTHT  249 (363)
T ss_dssp             EEEEECSCH
T ss_pred             eEEEECCCc
Confidence            999998873

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=96.63  E-value=0.0023  Score=57.19  Aligned_cols=117  Identities=15%  Similarity=0.045  Sum_probs=65.8

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCC--eEEEEecCcchhhhHhhhc-----CCCCeEEEEecCCCHHHHHHHHHHH
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGA--KVVIADVEDTLGSVLASTL-----APAPVTFVHCDVSLEEDIENLINST  100 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~--~vv~~~r~~~~~~~~~~~~-----~~~~v~~~~~D~~d~~~i~~~~~~~  100 (305)
                      -+++++|.|+|++|.+|..++..++.+|.  .|++++.++.+.+.....+     ...++.+ .   +|.   .+.+   
T Consensus         5 ~~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~~-t---~d~---~~al---   74 (343)
T 3fi9_A            5 YLTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLTF-T---SDI---KEAL---   74 (343)
T ss_dssp             CSCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCEE-E---SCH---HHHH---
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceEE-c---CCH---HHHh---
Confidence            34578899999999999999999999984  7999998765433211111     1112221 0   121   2222   


Q ss_pred             HHhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCE-EEEecccc
Q 021960          101 VSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGC-IISTASVA  171 (305)
Q Consensus       101 ~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~-iv~isS~~  171 (305)
                          ..-|++|.+||....       ...+   -...+..|......+.+.+...   ...+. ++++|-..
T Consensus        75 ----~dADvVvitaG~p~k-------pG~~---R~dLl~~N~~I~~~i~~~i~~~---~p~a~~vlvvsNPv  129 (343)
T 3fi9_A           75 ----TDAKYIVSSGGAPRK-------EGMT---REDLLKGNAEIAAQLGKDIKSY---CPDCKHVIIIFNPA  129 (343)
T ss_dssp             ----TTEEEEEECCC--------------C---HHHHHHHHHHHHHHHHHHHHHH---CTTCCEEEECSSSH
T ss_pred             ----CCCCEEEEccCCCCC-------CCCC---HHHHHHHHHHHHHHHHHHHHHh---ccCcEEEEEecCch
Confidence                368999999996421       1122   2344566665544444444332   34463 67776543

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=96.63  E-value=0.008  Score=54.20  Aligned_cols=78  Identities=8%  Similarity=0.039  Sum_probs=52.7

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhc-CCc
Q 021960           29 LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRY-GRL  107 (305)
Q Consensus        29 l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~-g~i  107 (305)
                      ..|++|||+||+|++|...+..+...|++|+.+. ++.+.+.+ +.+...    ..+|..+.+    +.+++.+.. +++
T Consensus       163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~~~-~~lGa~----~vi~~~~~~----~~~~v~~~t~g~~  232 (371)
T 3gqv_A          163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFDLA-KSRGAE----EVFDYRAPN----LAQTIRTYTKNNL  232 (371)
T ss_dssp             SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHH-HHTTCS----EEEETTSTT----HHHHHHHHTTTCC
T ss_pred             CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHHHH-HHcCCc----EEEECCCch----HHHHHHHHccCCc
Confidence            4689999999999999999999888999988775 45544433 333322    224555533    222333322 359


Q ss_pred             cEEEEcCCC
Q 021960          108 DILYNNAGV  116 (305)
Q Consensus       108 d~li~nag~  116 (305)
                      |++|.+.|.
T Consensus       233 d~v~d~~g~  241 (371)
T 3gqv_A          233 RYALDCITN  241 (371)
T ss_dssp             CEEEESSCS
T ss_pred             cEEEECCCc
Confidence            999999884

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=96.61  E-value=0.0042  Score=56.22  Aligned_cols=80  Identities=18%  Similarity=0.313  Sum_probs=54.5

Q ss_pred             CCCEEEEec-CCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 021960           30 EGKVAIITG-GARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLD  108 (305)
Q Consensus        30 ~~k~vlVtG-as~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id  108 (305)
                      .|.++||.| |+|++|...+..+...|++|+.+++++.+.+.+.+ +....+    +|..+.+-.+.+.+.. .. ..+|
T Consensus       170 ~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~~~-lGa~~~----~~~~~~~~~~~v~~~t-~~-~g~d  242 (379)
T 3iup_A          170 EGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLKA-QGAVHV----CNAASPTFMQDLTEAL-VS-TGAT  242 (379)
T ss_dssp             TTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHHHH-TTCSCE----EETTSTTHHHHHHHHH-HH-HCCC
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHh-CCCcEE----EeCCChHHHHHHHHHh-cC-CCce
Confidence            578899997 89999999998888899999999988777666543 332212    3554433222222222 21 1599


Q ss_pred             EEEEcCCC
Q 021960          109 ILYNNAGV  116 (305)
Q Consensus       109 ~li~nag~  116 (305)
                      ++|.+.|.
T Consensus       243 ~v~d~~g~  250 (379)
T 3iup_A          243 IAFDATGG  250 (379)
T ss_dssp             EEEESCEE
T ss_pred             EEEECCCc
Confidence            99999984

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=96.60  E-value=0.0029  Score=53.13  Aligned_cols=72  Identities=19%  Similarity=0.210  Sum_probs=53.6

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEE
Q 021960           31 GKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDIL  110 (305)
Q Consensus        31 ~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~l  110 (305)
                      .+.++|.|+ |.+|..+++.|.+.|+ |++++++....+.+.     ..+.++.+|.+|.+.++++      .....|.+
T Consensus         9 ~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~-----~~~~~i~gd~~~~~~l~~a------~i~~ad~v   75 (234)
T 2aef_A            9 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKVLR-----SGANFVHGDPTRVSDLEKA------NVRGARAV   75 (234)
T ss_dssp             -CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH-----TTCEEEESCTTCHHHHHHT------TCTTCSEE
T ss_pred             CCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh-----cCCeEEEcCCCCHHHHHhc------CcchhcEE
Confidence            457899997 8999999999999999 999988876554433     2377889999998665543      12357888


Q ss_pred             EEcCC
Q 021960          111 YNNAG  115 (305)
Q Consensus       111 i~nag  115 (305)
                      |.+.+
T Consensus        76 i~~~~   80 (234)
T 2aef_A           76 IVDLE   80 (234)
T ss_dssp             EECCS
T ss_pred             EEcCC
Confidence            87644

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=96.54  E-value=0.0061  Score=54.99  Aligned_cols=79  Identities=16%  Similarity=0.240  Sum_probs=52.5

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCC-eEEEEecCcchhhhHhhhcCCCCeEEEEecCCC-HHHHHHHHHHHHHhcCCc
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGA-KVVIADVEDTLGSVLASTLAPAPVTFVHCDVSL-EEDIENLINSTVSRYGRL  107 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~-~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d-~~~i~~~~~~~~~~~g~i  107 (305)
                      .|++|||+|+ |++|...+..+...|+ +|+.+++++.+.+.+.+ +...    ..+|..+ .+++.+.+.++..  +.+
T Consensus       195 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~-lGa~----~vi~~~~~~~~~~~~v~~~~~--~g~  266 (376)
T 1e3i_A          195 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKA-LGAT----DCLNPRELDKPVQDVITELTA--GGV  266 (376)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-TTCS----EEECGGGCSSCHHHHHHHHHT--SCB
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH-hCCc----EEEccccccchHHHHHHHHhC--CCc
Confidence            4789999996 8999999988888999 78888888877665543 3222    1234442 1122332333222  369


Q ss_pred             cEEEEcCCC
Q 021960          108 DILYNNAGV  116 (305)
Q Consensus       108 d~li~nag~  116 (305)
                      |++|.+.|.
T Consensus       267 Dvvid~~G~  275 (376)
T 1e3i_A          267 DYSLDCAGT  275 (376)
T ss_dssp             SEEEESSCC
T ss_pred             cEEEECCCC
Confidence            999999884

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=96.52  E-value=0.0048  Score=55.58  Aligned_cols=79  Identities=16%  Similarity=0.236  Sum_probs=52.5

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCC-eEEEEecCcchhhhHhhhcCCCCeEEEEecCCC-HHHHHHHHHHHHHhcCCc
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGA-KVVIADVEDTLGSVLASTLAPAPVTFVHCDVSL-EEDIENLINSTVSRYGRL  107 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~-~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d-~~~i~~~~~~~~~~~g~i  107 (305)
                      .|++|||+|+ |++|...+..+...|+ +|+.+++++.+.+.+.+ +...    ..+|..+ .+++.+.+.++..  +.+
T Consensus       190 ~g~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~-lGa~----~vi~~~~~~~~~~~~v~~~~~--~g~  261 (373)
T 2fzw_A          190 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAKE-FGAT----ECINPQDFSKPIQEVLIEMTD--GGV  261 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH-HTCS----EEECGGGCSSCHHHHHHHHTT--SCB
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH-cCCc----eEeccccccccHHHHHHHHhC--CCC
Confidence            4789999996 8999999988888899 78888888777665543 3222    1234432 1223332332221  369


Q ss_pred             cEEEEcCCC
Q 021960          108 DILYNNAGV  116 (305)
Q Consensus       108 d~li~nag~  116 (305)
                      |++|.++|.
T Consensus       262 D~vid~~g~  270 (373)
T 2fzw_A          262 DYSFECIGN  270 (373)
T ss_dssp             SEEEECSCC
T ss_pred             CEEEECCCc
Confidence            999999883

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=96.52  E-value=0.0085  Score=53.29  Aligned_cols=116  Identities=15%  Similarity=0.125  Sum_probs=64.1

Q ss_pred             CEEEEecCCCchHHHHHHHHHHcCC--e-----EEEEecCcc--hhhh-HhhhcC-C-CCeEEEEecCCCHHHHHHHHHH
Q 021960           32 KVAIITGGARGIGEAAVRLFARHGA--K-----VVIADVEDT--LGSV-LASTLA-P-APVTFVHCDVSLEEDIENLINS   99 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~g~--~-----vv~~~r~~~--~~~~-~~~~~~-~-~~v~~~~~D~~d~~~i~~~~~~   99 (305)
                      .+|+||||+|.||.+++..|+..|.  .     ++++++.+.  ..+- ..+... . .-+.-+..- .+   ..     
T Consensus         4 ~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~~~~~~~~-~~---~~-----   74 (333)
T 5mdh_A            4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIAT-DK---EE-----   74 (333)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEEE-SC---HH-----
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhcccCCEEEc-CC---cH-----
Confidence            5799999999999999999998875  4     888888642  1111 111111 1 112111111 11   11     


Q ss_pred             HHHhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCC-EEEEecccc
Q 021960          100 TVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGG-CIISTASVA  171 (305)
Q Consensus       100 ~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~-~iv~isS~~  171 (305)
                        +.+..-|++|+.||.....       ..+.   ...++.|......+.+.+...   ...+ .++++|-..
T Consensus        75 --~~~~daDvVvitAg~prkp-------G~tR---~dll~~N~~i~~~i~~~i~~~---~~~~~~vivvsNPv  132 (333)
T 5mdh_A           75 --IAFKDLDVAILVGSMPRRD-------GMER---KDLLKANVKIFKCQGAALDKY---AKKSVKVIVVGNPA  132 (333)
T ss_dssp             --HHTTTCSEEEECCSCCCCT-------TCCT---TTTHHHHHHHHHHHHHHHHHH---SCTTCEEEECSSSH
T ss_pred             --HHhCCCCEEEEeCCCCCCC-------CCCH---HHHHHHHHHHHHHHHHHHHHh---CCCCeEEEEcCCch
Confidence              1123689999999864221       1122   234566776654444444332   2345 578877543

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=96.48  E-value=0.0038  Score=56.42  Aligned_cols=79  Identities=16%  Similarity=0.206  Sum_probs=53.1

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCC-eEEEEecCcchhhhHhhhcCCCCeEEEEecCCC-HHHHHHHHHHHHHhcCCc
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGA-KVVIADVEDTLGSVLASTLAPAPVTFVHCDVSL-EEDIENLINSTVSRYGRL  107 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~-~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d-~~~i~~~~~~~~~~~g~i  107 (305)
                      .|++|||+|+ |++|...+..+...|+ +|+.+++++.+.+.+.+ +... .   .+|..+ .+++.+.+.++..  +.+
T Consensus       193 ~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~-lGa~-~---vi~~~~~~~~~~~~i~~~~~--gg~  264 (378)
T 3uko_A          193 PGSNVAIFGL-GTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKK-FGVN-E---FVNPKDHDKPIQEVIVDLTD--GGV  264 (378)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHT-TTCC-E---EECGGGCSSCHHHHHHHHTT--SCB
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH-cCCc-E---EEccccCchhHHHHHHHhcC--CCC
Confidence            4789999998 9999999988888899 79999988887775543 3222 1   234432 1222332322221  369


Q ss_pred             cEEEEcCCC
Q 021960          108 DILYNNAGV  116 (305)
Q Consensus       108 d~li~nag~  116 (305)
                      |++|.++|.
T Consensus       265 D~vid~~g~  273 (378)
T 3uko_A          265 DYSFECIGN  273 (378)
T ss_dssp             SEEEECSCC
T ss_pred             CEEEECCCC
Confidence            999999884

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=96.48  E-value=0.0071  Score=54.25  Aligned_cols=38  Identities=16%  Similarity=0.143  Sum_probs=32.2

Q ss_pred             CC-CEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcch
Q 021960           30 EG-KVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTL   67 (305)
Q Consensus        30 ~~-k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~   67 (305)
                      .| ++|||+||+|++|...+..+...|++|+++.++...
T Consensus       166 ~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~  204 (364)
T 1gu7_A          166 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPN  204 (364)
T ss_dssp             TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTT
T ss_pred             CCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccc
Confidence            47 899999999999999988887889998888765543

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=96.47  E-value=0.012  Score=53.29  Aligned_cols=78  Identities=15%  Similarity=0.181  Sum_probs=53.6

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcC-CeEEEEecCcchhhhHhhhcCCCCeEEEEecCC--CHHHHHHHHHHHHHhcC-
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHG-AKVVIADVEDTLGSVLASTLAPAPVTFVHCDVS--LEEDIENLINSTVSRYG-  105 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g-~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~--d~~~i~~~~~~~~~~~g-  105 (305)
                      .|++|||+| +|++|...+..+...| ++|+.+++++.+.+.+.+ +...  .+  +|..  +.+++.   +++.+..+ 
T Consensus       195 ~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~-lGa~--~v--i~~~~~~~~~~~---~~v~~~~~g  265 (380)
T 1vj0_A          195 AGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEE-IGAD--LT--LNRRETSVEERR---KAIMDITHG  265 (380)
T ss_dssp             BTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHH-TTCS--EE--EETTTSCHHHHH---HHHHHHTTT
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHH-cCCc--EE--EeccccCcchHH---HHHHHHhCC
Confidence            478999999 8999999998888899 599999988877665543 3222  12  3443  133333   33333322 


Q ss_pred             -CccEEEEcCCC
Q 021960          106 -RLDILYNNAGV  116 (305)
Q Consensus       106 -~id~li~nag~  116 (305)
                       .+|++|.++|.
T Consensus       266 ~g~Dvvid~~g~  277 (380)
T 1vj0_A          266 RGADFILEATGD  277 (380)
T ss_dssp             SCEEEEEECSSC
T ss_pred             CCCcEEEECCCC
Confidence             59999999884

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=96.47  E-value=0.0043  Score=55.63  Aligned_cols=75  Identities=20%  Similarity=0.392  Sum_probs=50.9

Q ss_pred             CCCEEEEecCCCchHHHH-HHHH-HHcCCe-EEEEecCcc---hhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHh
Q 021960           30 EGKVAIITGGARGIGEAA-VRLF-ARHGAK-VVIADVEDT---LGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSR  103 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~i-a~~l-~~~g~~-vv~~~r~~~---~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~  103 (305)
                      ++++|||+|+ |++|... +..+ ...|++ |+.+++++.   +.+.+.+ +.   ...+  |..+.+ +.+ +.++   
T Consensus       172 ~~~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~-lG---a~~v--~~~~~~-~~~-i~~~---  239 (357)
T 2b5w_A          172 DPSSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEE-LD---ATYV--DSRQTP-VED-VPDV---  239 (357)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHH-TT---CEEE--ETTTSC-GGG-HHHH---
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHH-cC---Cccc--CCCccC-HHH-HHHh---
Confidence            3489999999 9999999 7666 567997 999998877   6665543 32   2223  555422 222 3333   


Q ss_pred             cCCccEEEEcCCC
Q 021960          104 YGRLDILYNNAGV  116 (305)
Q Consensus       104 ~g~id~li~nag~  116 (305)
                      .+.+|++|.+.|.
T Consensus       240 ~gg~Dvvid~~g~  252 (357)
T 2b5w_A          240 YEQMDFIYEATGF  252 (357)
T ss_dssp             SCCEEEEEECSCC
T ss_pred             CCCCCEEEECCCC
Confidence            2369999999884

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=96.47  E-value=0.0087  Score=54.65  Aligned_cols=44  Identities=18%  Similarity=0.174  Sum_probs=37.9

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHh
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLA   72 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~   72 (305)
                      .+.+++|+|+|+ |.+|+.+++.+...|++|++++++....+...
T Consensus       169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~~  212 (401)
T 1x13_A          169 KVPPAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQ  212 (401)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGGHHHHH
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH
Confidence            357899999996 89999999999999999999999877665543

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=96.46  E-value=0.0086  Score=52.74  Aligned_cols=82  Identities=20%  Similarity=0.186  Sum_probs=55.2

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRL  107 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~i  107 (305)
                      ++.|+.++|.|++.=+|+.+|+.|+..|++|.+++|+..+.....+.+.........+..++.+++.+.+.       .-
T Consensus       174 ~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~~~~~t~~~~t~~~~L~e~l~-------~A  246 (320)
T 1edz_A          174 RLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSL-------DS  246 (320)
T ss_dssp             TTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHH-------HC
T ss_pred             CCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHhhhcccccccccccHhHHHHHhc-------cC
Confidence            78899999999877789999999999999999998874432222222221111111122244566666665       46


Q ss_pred             cEEEEcCCC
Q 021960          108 DILYNNAGV  116 (305)
Q Consensus       108 d~li~nag~  116 (305)
                      |+||.+.|.
T Consensus       247 DIVIsAtg~  255 (320)
T 1edz_A          247 DVVITGVPS  255 (320)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999998885

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=96.45  E-value=0.005  Score=54.85  Aligned_cols=77  Identities=16%  Similarity=0.149  Sum_probs=52.3

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHc--CCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARH--GAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRL  107 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~--g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~i  107 (305)
                      .|++|||+|+ |++|...+..+...  |++|+.+++++.+.+.+.+ +...  .  .+|..+.   .+.++++.+ ...+
T Consensus       170 ~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~-lGa~--~--vi~~~~~---~~~~~~~~~-g~g~  239 (344)
T 2h6e_A          170 AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHRDFALE-LGAD--Y--VSEMKDA---ESLINKLTD-GLGA  239 (344)
T ss_dssp             SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHH-HTCS--E--EECHHHH---HHHHHHHHT-TCCE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHH-hCCC--E--Eeccccc---hHHHHHhhc-CCCc
Confidence            6889999999 89999999888888  9999999988777665543 3222  1  1343320   122333332 1269


Q ss_pred             cEEEEcCCC
Q 021960          108 DILYNNAGV  116 (305)
Q Consensus       108 d~li~nag~  116 (305)
                      |++|.++|.
T Consensus       240 D~vid~~g~  248 (344)
T 2h6e_A          240 SIAIDLVGT  248 (344)
T ss_dssp             EEEEESSCC
T ss_pred             cEEEECCCC
Confidence            999999883

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=96.44  E-value=0.0067  Score=55.35  Aligned_cols=77  Identities=23%  Similarity=0.398  Sum_probs=53.2

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCC-eEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcC--C
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGA-KVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYG--R  106 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~-~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g--~  106 (305)
                      .|++|||+|+ |++|...+..+...|+ +|+.+++++.+.+.+.+ +...    ..+|..+.+    +.+++.+..+  .
T Consensus       213 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~-lGa~----~vi~~~~~~----~~~~i~~~t~g~g  282 (404)
T 3ip1_A          213 PGDNVVILGG-GPIGLAAVAILKHAGASKVILSEPSEVRRNLAKE-LGAD----HVIDPTKEN----FVEAVLDYTNGLG  282 (404)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHH-HTCS----EEECTTTSC----HHHHHHHHTTTCC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-cCCC----EEEcCCCCC----HHHHHHHHhCCCC
Confidence            5889999998 8999999988888999 78888888777665543 3222    123554432    2233333322  5


Q ss_pred             ccEEEEcCCC
Q 021960          107 LDILYNNAGV  116 (305)
Q Consensus       107 id~li~nag~  116 (305)
                      +|++|.+.|.
T Consensus       283 ~D~vid~~g~  292 (404)
T 3ip1_A          283 AKLFLEATGV  292 (404)
T ss_dssp             CSEEEECSSC
T ss_pred             CCEEEECCCC
Confidence            9999999884

>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*

Probab=96.38  E-value=0.09  Score=45.22  Aligned_cols=161  Identities=16%  Similarity=0.076  Sum_probs=93.1

Q ss_pred             CEEEEecCCCchHHHHHHHHHH-cCCeEE-EEecCcch--h-----------------hhHhhhcCCCCeEEEEecCCCH
Q 021960           32 KVAIITGGARGIGEAAVRLFAR-HGAKVV-IADVEDTL--G-----------------SVLASTLAPAPVTFVHCDVSLE   90 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~-~g~~vv-~~~r~~~~--~-----------------~~~~~~~~~~~v~~~~~D~~d~   90 (305)
                      ..++|+|++|.+|+.+++.+.+ .|+.++ +++++...  .                 ..+.+.+...   =+.+|++.+
T Consensus         6 mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~~g~d~~~~~g~~~~~v~~~~dl~~~l~~~---DvVIDft~p   82 (273)
T 1dih_A            6 IRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDDF---DVFIDFTRP   82 (273)
T ss_dssp             EEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTTSC---SEEEECSCH
T ss_pred             cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhhhhhhHHHHcCCCcCCceecCCHHHHhcCC---CEEEEcCCh
Confidence            4799999999999999999875 467766 55554321  0                 0011111111   244689999


Q ss_pred             HHHHHHHHHHHHhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHH----------------HHhHHHHHHHHHHHH
Q 021960           91 EDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMR----------------VNVKGMALGIKHAAR  154 (305)
Q Consensus        91 ~~i~~~~~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~----------------~n~~~~~~l~~~~~~  154 (305)
                      +.....+....+.  .+++|+-..|.             +.++.+++..                +|+  .+.+++.+.+
T Consensus        83 ~~~~~~~~~a~~~--G~~vVigTtG~-------------~~e~~~~L~~~a~~~~vv~a~N~siGvn~--~~~l~~~aa~  145 (273)
T 1dih_A           83 EGTLNHLAFCRQH--GKGMVIGTTGF-------------DEAGKQAIRDAAADIAIVFAANFSVGVNV--MLKLLEKAAK  145 (273)
T ss_dssp             HHHHHHHHHHHHT--TCEEEECCCCC-------------CHHHHHHHHHHTTTSCEEECSCCCHHHHH--HHHHHHHHHH
T ss_pred             HHHHHHHHHHHhC--CCCEEEECCCC-------------CHHHHHHHHHhcCCCCEEEEecCcHHHHH--HHHHHHHHHH
Confidence            9888888777655  46777766653             2232222221                121  2334555555


Q ss_pred             HHHcCCCCEEEEecccccccCCCCCccchhhHHHHHHHHHHHHHHHC---------------cCCcEEEEEeCCcccc
Q 021960          155 VMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELG---------------RYGIRVNCISPFGVAT  217 (305)
Q Consensus       155 ~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~---------------~~~i~v~~v~PG~v~T  217 (305)
                      .|..  .-.|=.+=   .+...+--++||.++...+.+.+.+...+.               +.+|.|.++.-|.+-.
T Consensus       146 ~~~~--~~dieiiE---~Hh~~K~DaPSGTA~~~ae~i~~~~~~~~~~~~~~~r~~~~~~r~~~~i~i~s~R~g~vvg  218 (273)
T 1dih_A          146 VMGD--YTDIEIIE---AHHRHKVDAPSGTALAMGEAIAHALDKDLKDCAVYSREGHTGERVPGTIGFATVRAGDIVG  218 (273)
T ss_dssp             HHTT--TSEEEEEE---EECTTCCSSSCHHHHHHHHHHHHHTTCCGGGTEECCCCSCCCSCCTTCEEEEEEECTTCCE
T ss_pred             hcCC--CCCEEEEE---eecCCCCCCCCHHHHHHHHHHHHhhCCCccccccccccCccCCCCCCcceEEEEeCCCCCc
Confidence            5521  11222222   223344456789999888888766554321               3568899998665544

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=96.33  E-value=0.0046  Score=55.77  Aligned_cols=77  Identities=25%  Similarity=0.368  Sum_probs=52.4

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCC-eEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHH---h-c
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGA-KVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVS---R-Y  104 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~-~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~---~-~  104 (305)
                      .|++|||+|+ |++|...+..+...|+ +|+++++++.+.+...+ +...    ..+|.++.+    +.+.+.+   . .
T Consensus       182 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~-lGa~----~vi~~~~~~----~~~~i~~~~~~~~  251 (370)
T 4ej6_A          182 AGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKRRLAEE-VGAT----ATVDPSAGD----VVEAIAGPVGLVP  251 (370)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHH-HTCS----EEECTTSSC----HHHHHHSTTSSST
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-cCCC----EEECCCCcC----HHHHHHhhhhccC
Confidence            4789999998 8999999988888999 78888888776665443 3222    224655432    2223332   1 2


Q ss_pred             CCccEEEEcCCC
Q 021960          105 GRLDILYNNAGV  116 (305)
Q Consensus       105 g~id~li~nag~  116 (305)
                      +.+|++|.++|.
T Consensus       252 gg~Dvvid~~G~  263 (370)
T 4ej6_A          252 GGVDVVIECAGV  263 (370)
T ss_dssp             TCEEEEEECSCC
T ss_pred             CCCCEEEECCCC
Confidence            369999999873

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=96.32  E-value=0.0074  Score=54.36  Aligned_cols=79  Identities=18%  Similarity=0.192  Sum_probs=51.7

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCC-eEEEEecCcchhhhHhhhcCCCCeEEEEecCCC-HHHHHHHHHHHHHhcCCc
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGA-KVVIADVEDTLGSVLASTLAPAPVTFVHCDVSL-EEDIENLINSTVSRYGRL  107 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~-~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d-~~~i~~~~~~~~~~~g~i  107 (305)
                      .|++|||+|+ |++|...+..+...|+ +|+.+++++.+.+.+.+ +...    ..+|..+ .+++.+.+.++..  +.+
T Consensus       191 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~-lGa~----~vi~~~~~~~~~~~~i~~~t~--gg~  262 (373)
T 1p0f_A          191 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIE-LGAT----ECLNPKDYDKPIYEVICEKTN--GGV  262 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH-TTCS----EEECGGGCSSCHHHHHHHHTT--SCB
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHH-cCCc----EEEecccccchHHHHHHHHhC--CCC
Confidence            4789999996 8999999988888899 78888888777665543 3222    1234432 1122222222211  369


Q ss_pred             cEEEEcCCC
Q 021960          108 DILYNNAGV  116 (305)
Q Consensus       108 d~li~nag~  116 (305)
                      |++|.++|.
T Consensus       263 Dvvid~~g~  271 (373)
T 1p0f_A          263 DYAVECAGR  271 (373)
T ss_dssp             SEEEECSCC
T ss_pred             CEEEECCCC
Confidence            999999884

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=96.32  E-value=0.0047  Score=54.46  Aligned_cols=73  Identities=22%  Similarity=0.360  Sum_probs=49.6

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDI  109 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~  109 (305)
                      .|+++||+||+|++|...+..+...|++|+.+.+.+. .+.+ +.+...    ..+|..+.+.+.+       ....+|+
T Consensus       152 ~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~~-~~~~-~~lGa~----~~i~~~~~~~~~~-------~~~g~D~  218 (321)
T 3tqh_A          152 QGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASKRN-HAFL-KALGAE----QCINYHEEDFLLA-------ISTPVDA  218 (321)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECHHH-HHHH-HHHTCS----EEEETTTSCHHHH-------CCSCEEE
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeccch-HHHH-HHcCCC----EEEeCCCcchhhh-------hccCCCE
Confidence            5789999999999999999999899999988875443 3333 333322    1235554331221       1246999


Q ss_pred             EEEcCC
Q 021960          110 LYNNAG  115 (305)
Q Consensus       110 li~nag  115 (305)
                      +|.+.|
T Consensus       219 v~d~~g  224 (321)
T 3tqh_A          219 VIDLVG  224 (321)
T ss_dssp             EEESSC
T ss_pred             EEECCC
Confidence            999887

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=96.23  E-value=0.0051  Score=54.91  Aligned_cols=69  Identities=17%  Similarity=0.216  Sum_probs=50.5

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDI  109 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~  109 (305)
                      .|++|||+|+ |++|...+..+...|++|+++++++.+.+.+.+ +....+  +    ++.+.+.+          .+|+
T Consensus       176 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~-lGa~~v--~----~~~~~~~~----------~~D~  237 (348)
T 3two_A          176 KGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDALS-MGVKHF--Y----TDPKQCKE----------ELDF  237 (348)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHH-TTCSEE--E----SSGGGCCS----------CEEE
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHh-cCCCee--c----CCHHHHhc----------CCCE
Confidence            5889999997 899999998888899999999988887776544 332212  2    33322211          6999


Q ss_pred             EEEcCCC
Q 021960          110 LYNNAGV  116 (305)
Q Consensus       110 li~nag~  116 (305)
                      +|.+.|.
T Consensus       238 vid~~g~  244 (348)
T 3two_A          238 IISTIPT  244 (348)
T ss_dssp             EEECCCS
T ss_pred             EEECCCc
Confidence            9999884

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=96.19  E-value=0.0092  Score=54.26  Aligned_cols=77  Identities=18%  Similarity=0.246  Sum_probs=51.9

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCC-eEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhc--CC
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGA-KVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRY--GR  106 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~-~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~--g~  106 (305)
                      .|++|||.|+ |++|...+..+...|+ +|+.+++++.+.+.+.+ + +.  ..  +|.++.+.+.   +++.+..  ..
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~-l-Ga--~~--i~~~~~~~~~---~~v~~~t~g~g  254 (398)
T 1kol_A          185 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAKA-Q-GF--EI--ADLSLDTPLH---EQIAALLGEPE  254 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH-T-TC--EE--EETTSSSCHH---HHHHHHHSSSC
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHH-c-CC--cE--EccCCcchHH---HHHHHHhCCCC
Confidence            5789999995 9999999888778899 68888888777665543 3 22  22  4554432222   2232222  25


Q ss_pred             ccEEEEcCCC
Q 021960          107 LDILYNNAGV  116 (305)
Q Consensus       107 id~li~nag~  116 (305)
                      +|++|.++|.
T Consensus       255 ~Dvvid~~G~  264 (398)
T 1kol_A          255 VDCAVDAVGF  264 (398)
T ss_dssp             EEEEEECCCT
T ss_pred             CCEEEECCCC
Confidence            9999999985

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=96.15  E-value=0.071  Score=47.49  Aligned_cols=117  Identities=16%  Similarity=0.214  Sum_probs=65.4

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCC-------eEEEEecCcchh--hhHhhhc----CCCCeEEEEecCCCHHHH
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGA-------KVVIADVEDTLG--SVLASTL----APAPVTFVHCDVSLEEDI   93 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~-------~vv~~~r~~~~~--~~~~~~~----~~~~v~~~~~D~~d~~~i   93 (305)
                      ..++.-+|.|+||+|+||..++..|+....       .+++++..+...  +-....+    .......+..  +|.   
T Consensus        20 ~s~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~--~~~---   94 (345)
T 4h7p_A           20 GSMSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVVT--ADP---   94 (345)
T ss_dssp             --CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEE--SCH---
T ss_pred             CCCCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEEEc--CCh---
Confidence            455667999999999999999999987543       588888765321  1111111    1111222222  122   


Q ss_pred             HHHHHHHHHhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC--CCCEEEEecc
Q 021960           94 ENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINR--GGGCIISTAS  169 (305)
Q Consensus        94 ~~~~~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~~~iv~isS  169 (305)
                      .+       .+..-|++|..||....       ...+.+++   ++.|..-.    +.+.+.+.+.  +...|+++|-
T Consensus        95 ~~-------a~~~advVvi~aG~prk-------pGmtR~DL---l~~Na~I~----~~~~~~i~~~a~~~~~vlvvsN  151 (345)
T 4h7p_A           95 RV-------AFDGVAIAIMCGAFPRK-------AGMERKDL---LEMNARIF----KEQGEAIAAVAASDCRVVVVGN  151 (345)
T ss_dssp             HH-------HTTTCSEEEECCCCCCC-------TTCCHHHH---HHHHHHHH----HHHHHHHHHHSCTTCEEEECSS
T ss_pred             HH-------HhCCCCEEEECCCCCCC-------CCCCHHHH---HHHhHHHH----HHHHHHHHhhccCceEEEEeCC
Confidence            11       22468999999997432       12355444   56666543    4444444332  3456666664

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=96.13  E-value=0.0069  Score=52.53  Aligned_cols=45  Identities=11%  Similarity=0.255  Sum_probs=38.5

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCC-eEEEEecCcchhhhHhh
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGA-KVVIADVEDTLGSVLAS   73 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~-~vv~~~r~~~~~~~~~~   73 (305)
                      ++.++.++|+|+ ||.|++++..|++.|+ +|.++.|+.++.+.+.+
T Consensus       119 ~~~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~  164 (282)
T 3fbt_A          119 EIKNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYG  164 (282)
T ss_dssp             CCTTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCT
T ss_pred             CccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH
Confidence            467999999997 7999999999999998 89999998776655543

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=96.08  E-value=0.013  Score=53.17  Aligned_cols=45  Identities=22%  Similarity=0.206  Sum_probs=38.4

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhh
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLAS   73 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~   73 (305)
                      .+.+++|+|+|+ |++|+.+++.+...|++|++++++..+.+...+
T Consensus       169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~~  213 (384)
T 1l7d_A          169 TVPPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVES  213 (384)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHH
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence            457899999996 899999999999999999999998776655543

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=96.08  E-value=0.049  Score=48.16  Aligned_cols=115  Identities=16%  Similarity=0.111  Sum_probs=67.4

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCC--eEEEEecCcchhhh----Hhhhc--CCCCeEEEEecCCCHHHHHHHHHHHH
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGA--KVVIADVEDTLGSV----LASTL--APAPVTFVHCDVSLEEDIENLINSTV  101 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~--~vv~~~r~~~~~~~----~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~  101 (305)
                      +.+++.|+|+ |.+|.+++..|+..|.  .|+++++++.+.+.    +....  .+..+.....|   .           
T Consensus         4 ~~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~---~-----------   68 (326)
T 3pqe_A            4 HVNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGT---Y-----------   68 (326)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEEC---G-----------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCc---H-----------
Confidence            3568999996 9999999999999987  79999987654333    11111  11223333222   1           


Q ss_pred             HhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEeccccc
Q 021960          102 SRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAG  172 (305)
Q Consensus       102 ~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~  172 (305)
                      +....-|++|.++|.....       ..+..   ..+..|......+.+.+...   .+.+.++++|-...
T Consensus        69 ~a~~~aDvVvi~ag~p~kp-------G~~R~---dL~~~N~~Iv~~i~~~I~~~---~p~a~vlvvtNPvd  126 (326)
T 3pqe_A           69 EDCKDADIVCICAGANQKP-------GETRL---ELVEKNLKIFKGIVSEVMAS---GFDGIFLVATNPVD  126 (326)
T ss_dssp             GGGTTCSEEEECCSCCCCT-------TCCHH---HHHHHHHHHHHHHHHHHHHT---TCCSEEEECSSSHH
T ss_pred             HHhCCCCEEEEecccCCCC-------CccHH---HHHHHHHHHHHHHHHHHHHh---cCCeEEEEcCChHH
Confidence            1223689999999964211       12333   33566665443344443332   34577777775443

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=95.98  E-value=0.023  Score=51.62  Aligned_cols=77  Identities=17%  Similarity=0.160  Sum_probs=51.9

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCC-eEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhc-C-C
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGA-KVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRY-G-R  106 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~-~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~-g-~  106 (305)
                      .|++|||+|+ |++|...+..+...|+ +|+.+++++.+.+.+.+ + +.  ..  +|..+.+.+.   +++.+.. + .
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~-l-Ga--~~--i~~~~~~~~~---~~~~~~~~g~g  254 (398)
T 2dph_A          185 PGSHVYIAGA-GPVGRCAAAGARLLGAACVIVGDQNPERLKLLSD-A-GF--ET--IDLRNSAPLR---DQIDQILGKPE  254 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHT-T-TC--EE--EETTSSSCHH---HHHHHHHSSSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH-c-CC--cE--EcCCCcchHH---HHHHHHhCCCC
Confidence            5789999997 9999999888878899 89999988777665543 2 22  22  4554422111   1222221 2 5


Q ss_pred             ccEEEEcCCC
Q 021960          107 LDILYNNAGV  116 (305)
Q Consensus       107 id~li~nag~  116 (305)
                      +|++|.++|.
T Consensus       255 ~Dvvid~~g~  264 (398)
T 2dph_A          255 VDCGVDAVGF  264 (398)
T ss_dssp             EEEEEECSCT
T ss_pred             CCEEEECCCC
Confidence            9999999985

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=95.95  E-value=0.054  Score=48.84  Aligned_cols=83  Identities=19%  Similarity=0.194  Sum_probs=55.1

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCC-----------CHHHHHHHH
Q 021960           29 LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVS-----------LEEDIENLI   97 (305)
Q Consensus        29 l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~-----------d~~~i~~~~   97 (305)
                      +.+++|+|+|+ |.+|..+++.+...|++|++++++..+.+.+.+.  +  ..++..|+.           ..+....-.
T Consensus       182 v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~l--G--a~~~~l~~~~~~~~gya~~~~~~~~~~~~  256 (381)
T 3p2y_A          182 VKPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQVRSV--G--AQWLDLGIDAAGEGGYARELSEAERAQQQ  256 (381)
T ss_dssp             ECCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHHT--T--CEECCCC-------------CHHHHHHHH
T ss_pred             cCCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc--C--CeEEeccccccccccchhhhhHHHHhhhH
Confidence            46789999998 8999999999999999999999998776665542  2  223222210           011122223


Q ss_pred             HHHHHhcCCccEEEEcCCC
Q 021960           98 NSTVSRYGRLDILYNNAGV  116 (305)
Q Consensus        98 ~~~~~~~g~id~li~nag~  116 (305)
                      +.+.+.....|+||.++..
T Consensus       257 ~~l~e~l~~aDIVI~tv~i  275 (381)
T 3p2y_A          257 QALEDAITKFDIVITTALV  275 (381)
T ss_dssp             HHHHHHHTTCSEEEECCCC
T ss_pred             HHHHHHHhcCCEEEECCCC
Confidence            3344444679999988754

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=95.92  E-value=0.0084  Score=53.54  Aligned_cols=77  Identities=10%  Similarity=0.112  Sum_probs=52.1

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCC-eEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcC--C
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGA-KVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYG--R  106 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~-~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g--~  106 (305)
                      .|++|||+|+ |++|...+..+...|+ +|+.+++++.+.+...+ +...    ..+|..+.+    +.+++.+..+  .
T Consensus       166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~-lGa~----~vi~~~~~~----~~~~v~~~t~g~g  235 (352)
T 3fpc_A          166 LGDTVCVIGI-GPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALE-YGAT----DIINYKNGD----IVEQILKATDGKG  235 (352)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHH-HTCC----EEECGGGSC----HHHHHHHHTTTCC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHH-hCCc----eEEcCCCcC----HHHHHHHHcCCCC
Confidence            4789999995 8999999888888899 79999888776665543 3222    123444432    2233333322  5


Q ss_pred             ccEEEEcCCC
Q 021960          107 LDILYNNAGV  116 (305)
Q Consensus       107 id~li~nag~  116 (305)
                      +|++|.+.|.
T Consensus       236 ~D~v~d~~g~  245 (352)
T 3fpc_A          236 VDKVVIAGGD  245 (352)
T ss_dssp             EEEEEECSSC
T ss_pred             CCEEEECCCC
Confidence            9999998884

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=95.92  E-value=0.042  Score=48.61  Aligned_cols=115  Identities=16%  Similarity=0.171  Sum_probs=61.1

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCC--eEEEEecCcchhhhHhhhcCC-----CCeEEEEecCCCHHHHHHHHHHH
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGA--KVVIADVEDTLGSVLASTLAP-----APVTFVHCDVSLEEDIENLINST  100 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~--~vv~~~r~~~~~~~~~~~~~~-----~~v~~~~~D~~d~~~i~~~~~~~  100 (305)
                      ..+++++.|+|+ |.+|.+++..|+..|.  .++++++++...+-....+..     ..+.... |  +.          
T Consensus         6 ~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~-~--~~----------   71 (326)
T 3vku_A            6 DKDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYS-A--EY----------   71 (326)
T ss_dssp             -CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEE-C--CG----------
T ss_pred             cCCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEE-C--cH----------
Confidence            345678999996 9999999999999887  799999876544322111110     1222222 1  21          


Q ss_pred             HHhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC-CCCEEEEecccc
Q 021960          101 VSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINR-GGGCIISTASVA  171 (305)
Q Consensus       101 ~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~isS~~  171 (305)
                       +.+..-|++|..||.....          -++-...++.|..-    ++.+.+.+.+. +.+.++++|-..
T Consensus        72 -~a~~~aDiVvi~ag~~~kp----------G~tR~dL~~~N~~I----~~~i~~~i~~~~p~a~ilvvtNPv  128 (326)
T 3vku_A           72 -SDAKDADLVVITAGAPQKP----------GETRLDLVNKNLKI----LKSIVDPIVDSGFNGIFLVAANPV  128 (326)
T ss_dssp             -GGGTTCSEEEECCCCC--------------------------C----HHHHHHHHHTTTCCSEEEECSSSH
T ss_pred             -HHhcCCCEEEECCCCCCCC----------CchHHHHHHHHHHH----HHHHHHHHHhcCCceEEEEccCch
Confidence             1234689999999964211          11223345555544    34444444333 457777777543

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=95.91  E-value=0.0059  Score=52.14  Aligned_cols=43  Identities=12%  Similarity=0.256  Sum_probs=35.9

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCC-eEEEEecCcchhhhHh
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGA-KVVIADVEDTLGSVLA   72 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~-~vv~~~r~~~~~~~~~   72 (305)
                      .+.+ +++|.|+ ||.|++++..|++.|+ +|.+++|+.++.+.+.
T Consensus       106 ~~~~-~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la  149 (253)
T 3u62_A          106 EVKE-PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIERAKALD  149 (253)
T ss_dssp             CCCS-SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCC
T ss_pred             CCCC-eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHH
Confidence            3467 8999997 8999999999999998 8999999876655443

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=95.88  E-value=0.015  Score=52.20  Aligned_cols=77  Identities=12%  Similarity=0.171  Sum_probs=51.1

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCC-eEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhc-CCc
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGA-KVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRY-GRL  107 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~-~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~-g~i  107 (305)
                      .|++|||+|+ |++|...+..+...|+ .|+.+++++.+.+.+.+ +... .   .+|..+.+    +.+++.+.. +.+
T Consensus       190 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~-lGa~-~---vi~~~~~~----~~~~~~~~~~gg~  259 (371)
T 1f8f_A          190 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAKQ-LGAT-H---VINSKTQD----PVAAIKEITDGGV  259 (371)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHH-HTCS-E---EEETTTSC----HHHHHHHHTTSCE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHH-cCCC-E---EecCCccC----HHHHHHHhcCCCC
Confidence            4789999995 8999999988878899 58888888777665543 3222 1   23444322    222233222 369


Q ss_pred             cEEEEcCCC
Q 021960          108 DILYNNAGV  116 (305)
Q Consensus       108 d~li~nag~  116 (305)
                      |++|.++|.
T Consensus       260 D~vid~~g~  268 (371)
T 1f8f_A          260 NFALESTGS  268 (371)
T ss_dssp             EEEEECSCC
T ss_pred             cEEEECCCC
Confidence            999999883

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=95.87  E-value=0.015  Score=53.38  Aligned_cols=73  Identities=21%  Similarity=0.230  Sum_probs=53.4

Q ss_pred             CEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEEE
Q 021960           32 KVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILY  111 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~li  111 (305)
                      ..|+|.|. |.+|..+++.|.++|+.|++++++....+.+...    .+.++..|.++.+.++++      ...+.|.||
T Consensus         5 ~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~----g~~vi~GDat~~~~L~~a------gi~~A~~vi   73 (413)
T 3l9w_A            5 MRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKF----GMKVFYGDATRMDLLESA------GAAKAEVLI   73 (413)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHT----TCCCEESCTTCHHHHHHT------TTTTCSEEE
T ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHhC----CCeEEEcCCCCHHHHHhc------CCCccCEEE
Confidence            46889996 7899999999999999999999998776655432    245677888887655543      112467777


Q ss_pred             EcCC
Q 021960          112 NNAG  115 (305)
Q Consensus       112 ~nag  115 (305)
                      .+.+
T Consensus        74 v~~~   77 (413)
T 3l9w_A           74 NAID   77 (413)
T ss_dssp             ECCS
T ss_pred             ECCC
Confidence            6543

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=95.84  E-value=0.023  Score=48.35  Aligned_cols=36  Identities=31%  Similarity=0.472  Sum_probs=29.9

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCC-eEEEEecC
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGA-KVVIADVE   64 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~-~vv~~~r~   64 (305)
                      .+.+++|+|.|+ ||+|.++++.|+..|. ++.+++.+
T Consensus        25 ~l~~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d   61 (251)
T 1zud_1           25 KLLDSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDD   61 (251)
T ss_dssp             HHHTCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCC
T ss_pred             HHhcCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            456789999997 7899999999999998 57777543

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=95.80  E-value=0.14  Score=45.22  Aligned_cols=115  Identities=16%  Similarity=0.121  Sum_probs=65.9

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHcCC-eEEEEecCcchhhhHhhhc--------CCCCeEEEEecCCCHHHHHHHHHH
Q 021960           29 LEGKVAIITGGARGIGEAAVRLFARHGA-KVVIADVEDTLGSVLASTL--------APAPVTFVHCDVSLEEDIENLINS   99 (305)
Q Consensus        29 l~~k~vlVtGas~giG~~ia~~l~~~g~-~vv~~~r~~~~~~~~~~~~--------~~~~v~~~~~D~~d~~~i~~~~~~   99 (305)
                      |+.+.+.|+|+ |.+|.+++..|+..|. .|++.++++...+.....+        ...++.. .   .|.         
T Consensus         5 m~~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~-t---~d~---------   70 (324)
T 3gvi_A            5 MARNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTG-A---NDY---------   70 (324)
T ss_dssp             -CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEE-E---SSG---------
T ss_pred             CcCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEE-e---CCH---------
Confidence            45678999998 9999999999999998 8999999876543211111        1222221 1   121         


Q ss_pred             HHHhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEeccccc
Q 021960          100 TVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAG  172 (305)
Q Consensus       100 ~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~  172 (305)
                        +.+..-|+||..+|.....   +    .+.   ...+..|..-...+.+.+...   .+.+.++++|-...
T Consensus        71 --~a~~~aDiVIiaag~p~k~---G----~~R---~dl~~~N~~i~~~i~~~i~~~---~p~a~iivvtNPvd  128 (324)
T 3gvi_A           71 --AAIEGADVVIVTAGVPRKP---G----MSR---DDLLGINLKVMEQVGAGIKKY---APEAFVICITNPLD  128 (324)
T ss_dssp             --GGGTTCSEEEECCSCCCC---------------CHHHHHHHHHHHHHHHHHHHH---CTTCEEEECCSSHH
T ss_pred             --HHHCCCCEEEEccCcCCCC---C----CCH---HHHHHhhHHHHHHHHHHHHHH---CCCeEEEecCCCcH
Confidence              1123689999999864221   1    122   223455554443334443332   34577788775443

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=95.75  E-value=0.012  Score=48.43  Aligned_cols=40  Identities=18%  Similarity=0.314  Sum_probs=34.4

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHh
Q 021960           33 VAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLA   72 (305)
Q Consensus        33 ~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~   72 (305)
                      +++|+||+|.+|.++++.|++.|++|++.+|+....+.+.
T Consensus         2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~   41 (212)
T 1jay_A            2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKA   41 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHH
T ss_pred             eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            5789999999999999999999999999999876554443

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=95.73  E-value=0.014  Score=50.12  Aligned_cols=41  Identities=17%  Similarity=0.190  Sum_probs=37.2

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHh
Q 021960           31 GKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLA   72 (305)
Q Consensus        31 ~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~   72 (305)
                      +|+++|.|+ ||.|++++..|++.|.+|.++.|+.++.+.+.
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la  158 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQ  158 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            899999997 89999999999999999999999988776665

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=95.72  E-value=0.038  Score=49.03  Aligned_cols=78  Identities=13%  Similarity=0.286  Sum_probs=50.5

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHc-CCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARH-GAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLD  108 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~-g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id  108 (305)
                      .|+++||+|+ |++|...+..+... |.+|+.+++++.+.+.+.+ +... . +  +|..+ +..+.+. +.... ..+|
T Consensus       171 ~g~~vlv~Ga-G~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~-lGa~-~-~--i~~~~-~~~~~v~-~~t~g-~g~d  241 (345)
T 3jv7_A          171 PGSTAVVIGV-GGLGHVGIQILRAVSAARVIAVDLDDDRLALARE-VGAD-A-A--VKSGA-GAADAIR-ELTGG-QGAT  241 (345)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHH-TTCS-E-E--EECST-THHHHHH-HHHGG-GCEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH-cCCC-E-E--EcCCC-cHHHHHH-HHhCC-CCCe
Confidence            5789999998 99999988777666 7899999998877765543 3222 1 2  23333 2222222 22111 1699


Q ss_pred             EEEEcCCC
Q 021960          109 ILYNNAGV  116 (305)
Q Consensus       109 ~li~nag~  116 (305)
                      ++|.+.|.
T Consensus       242 ~v~d~~G~  249 (345)
T 3jv7_A          242 AVFDFVGA  249 (345)
T ss_dssp             EEEESSCC
T ss_pred             EEEECCCC
Confidence            99999884

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=95.67  E-value=0.1  Score=46.02  Aligned_cols=116  Identities=16%  Similarity=0.152  Sum_probs=66.9

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHcCC-eEEEEecCcchhhhHhhhcC------CCCeEEEEecCCCHHHHHHHHHHHH
Q 021960           29 LEGKVAIITGGARGIGEAAVRLFARHGA-KVVIADVEDTLGSVLASTLA------PAPVTFVHCDVSLEEDIENLINSTV  101 (305)
Q Consensus        29 l~~k~vlVtGas~giG~~ia~~l~~~g~-~vv~~~r~~~~~~~~~~~~~------~~~v~~~~~D~~d~~~i~~~~~~~~  101 (305)
                      |+.+++.|+|+ |.+|.+++..|+..|. .|++.++++...+.....+.      +....+...  .|.+          
T Consensus         3 m~~~kI~iiGa-G~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t--~d~~----------   69 (321)
T 3p7m_A            3 MARKKITLVGA-GNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGT--NDYK----------   69 (321)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SCGG----------
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEc--CCHH----------
Confidence            34567889995 9999999999999888 89999998765432211111      111222211  1221          


Q ss_pred             HhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccc
Q 021960          102 SRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVA  171 (305)
Q Consensus       102 ~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~  171 (305)
                       .+..-|++|..+|.....       ..+..+   .+..|......+.+.+...   .+.+.++++|-..
T Consensus        70 -a~~~aDvVIi~ag~p~k~-------G~~R~d---l~~~N~~i~~~i~~~i~~~---~p~a~vivvtNPv  125 (321)
T 3p7m_A           70 -DLENSDVVIVTAGVPRKP-------GMSRDD---LLGINIKVMQTVGEGIKHN---CPNAFVICITNPL  125 (321)
T ss_dssp             -GGTTCSEEEECCSCCCCT-------TCCHHH---HHHHHHHHHHHHHHHHHHH---CTTCEEEECCSSH
T ss_pred             -HHCCCCEEEEcCCcCCCC-------CCCHHH---HHHHhHHHHHHHHHHHHHH---CCCcEEEEecCch
Confidence             123589999999864221       124333   3455655544444444332   3456777776543

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=95.65  E-value=0.22  Score=43.67  Aligned_cols=114  Identities=18%  Similarity=0.160  Sum_probs=67.1

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHcCC-eEEEEecCc--chhhhHhhhc--------CCCCeEEEEecCCCHHHHHHHH
Q 021960           29 LEGKVAIITGGARGIGEAAVRLFARHGA-KVVIADVED--TLGSVLASTL--------APAPVTFVHCDVSLEEDIENLI   97 (305)
Q Consensus        29 l~~k~vlVtGas~giG~~ia~~l~~~g~-~vv~~~r~~--~~~~~~~~~~--------~~~~v~~~~~D~~d~~~i~~~~   97 (305)
                      ++.+.+.|+|+ |.+|.+++..|+..|. .|++.++++  ...+.....+        ...++..  .  .|.       
T Consensus         6 ~~~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~--t--~d~-------   73 (315)
T 3tl2_A            6 IKRKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIG--T--SDY-------   73 (315)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEE--E--SCG-------
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEE--c--CCH-------
Confidence            45678999997 9999999999999999 999999983  3222111100        0111211  1  111       


Q ss_pred             HHHHHhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccc
Q 021960           98 NSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVA  171 (305)
Q Consensus        98 ~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~  171 (305)
                          +.+..-|++|.++|.....       ..+..   ..+..|..-.-.+.+.+..+   .+.+.++++|-..
T Consensus        74 ----~a~~~aDvVIiaag~p~kp-------g~~R~---dl~~~N~~i~~~i~~~i~~~---~p~a~vlvvsNPv  130 (315)
T 3tl2_A           74 ----ADTADSDVVVITAGIARKP-------GMSRD---DLVATNSKIMKSITRDIAKH---SPNAIIVVLTNPV  130 (315)
T ss_dssp             ----GGGTTCSEEEECCSCCCCT-------TCCHH---HHHHHHHHHHHHHHHHHHHH---CTTCEEEECCSSH
T ss_pred             ----HHhCCCCEEEEeCCCCCCC-------CCCHH---HHHHHHHHHHHHHHHHHHHh---CCCeEEEECCChH
Confidence                2234689999999974221       12333   34566665544444444332   3557778877543

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=95.64  E-value=0.056  Score=49.14  Aligned_cols=44  Identities=25%  Similarity=0.246  Sum_probs=38.2

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhh
Q 021960           29 LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLAS   73 (305)
Q Consensus        29 l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~   73 (305)
                      +.+.+|+|+|+ |.+|..+++.+...|++|++++++..+.+.+.+
T Consensus       188 v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~  231 (405)
T 4dio_A          188 VPAAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQVAS  231 (405)
T ss_dssp             ECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHH
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH
Confidence            45789999998 799999999999999999999999877666554

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=95.58  E-value=0.087  Score=46.59  Aligned_cols=79  Identities=20%  Similarity=0.212  Sum_probs=50.0

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeE-EEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKV-VIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLD  108 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~v-v~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id  108 (305)
                      .|+++||+|+ |++|...+..+...|+.+ +++++++.+.+... .+...  .  .+|.++.+. .+..+.+.+ ...+|
T Consensus       160 ~g~~VlV~Ga-G~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~-~lGa~--~--~i~~~~~~~-~~~~~~~~~-~~g~d  231 (346)
T 4a2c_A          160 ENKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDISSEKLALAK-SFGAM--Q--TFNSSEMSA-PQMQSVLRE-LRFNQ  231 (346)
T ss_dssp             TTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HTTCS--E--EEETTTSCH-HHHHHHHGG-GCSSE
T ss_pred             CCCEEEEECC-CCcchHHHHHHHHcCCcEEEEEechHHHHHHHH-HcCCe--E--EEeCCCCCH-HHHHHhhcc-cCCcc
Confidence            5889999987 899999998888899875 56677776655443 33222  1  234443222 222333322 24589


Q ss_pred             EEEEcCCC
Q 021960          109 ILYNNAGV  116 (305)
Q Consensus       109 ~li~nag~  116 (305)
                      +++.+.|.
T Consensus       232 ~v~d~~G~  239 (346)
T 4a2c_A          232 LILETAGV  239 (346)
T ss_dssp             EEEECSCS
T ss_pred             cccccccc
Confidence            99988873

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=95.52  E-value=0.021  Score=49.99  Aligned_cols=68  Identities=7%  Similarity=0.094  Sum_probs=46.3

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDI  109 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~  109 (305)
                      .|++|||+|+ |++|...+..+...|++|+.++ ++.+.+.+.+ +...  .++  |  |   .++    +   .+.+|+
T Consensus       142 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~~~-lGa~--~v~--~--d---~~~----v---~~g~Dv  202 (315)
T 3goh_A          142 KQREVLIVGF-GAVNNLLTQMLNNAGYVVDLVS-ASLSQALAAK-RGVR--HLY--R--E---PSQ----V---TQKYFA  202 (315)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHHTCEEEEEC-SSCCHHHHHH-HTEE--EEE--S--S---GGG----C---CSCEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEE-ChhhHHHHHH-cCCC--EEE--c--C---HHH----h---CCCccE
Confidence            5889999999 9999999988888899999998 6666665543 3211  122  3  2   122    2   346999


Q ss_pred             EEEcCCC
Q 021960          110 LYNNAGV  116 (305)
Q Consensus       110 li~nag~  116 (305)
                      +|.+.|.
T Consensus       203 v~d~~g~  209 (315)
T 3goh_A          203 IFDAVNS  209 (315)
T ss_dssp             EECC---
T ss_pred             EEECCCc
Confidence            9998874

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=95.46  E-value=0.3  Score=42.82  Aligned_cols=113  Identities=19%  Similarity=0.249  Sum_probs=64.6

Q ss_pred             EEEEecCCCchHHHHHHHHHHc-C--CeEEEEecCcchhhhHhhhcC-CCCeEEEEe-cCCCHHHHHHHHHHHHHhcCCc
Q 021960           33 VAIITGGARGIGEAAVRLFARH-G--AKVVIADVEDTLGSVLASTLA-PAPVTFVHC-DVSLEEDIENLINSTVSRYGRL  107 (305)
Q Consensus        33 ~vlVtGas~giG~~ia~~l~~~-g--~~vv~~~r~~~~~~~~~~~~~-~~~v~~~~~-D~~d~~~i~~~~~~~~~~~g~i  107 (305)
                      +|.|+||+|.+|.+++..|+.+ +  ..++++++.+.......+... ...+..... .-.+.+.+           ..-
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~~~~G~a~Dl~~~~~~~~v~~~~~~~~~~~~-----------~~a   70 (312)
T 3hhp_A            2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDATPAL-----------EGA   70 (312)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSSTTHHHHHHHHHTSCSSEEEEEECSSCCHHHH-----------TTC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCCCchhHHHHhhCCCCCceEEEecCCCcHHHh-----------CCC
Confidence            5889999999999999999876 5  368999887621111111111 112222211 11122222           368


Q ss_pred             cEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecc
Q 021960          108 DILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTAS  169 (305)
Q Consensus       108 d~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS  169 (305)
                      |++|..||....       ...+.   ...++.|..-...+.+.+..+   .+.+.++++|-
T Consensus        71 Divii~ag~~rk-------pG~~R---~dll~~N~~I~~~i~~~i~~~---~p~a~vlvvtN  119 (312)
T 3hhp_A           71 DVVLISAGVARK-------PGMDR---SDLFNVNAGIVKNLVQQVAKT---CPKACIGIITN  119 (312)
T ss_dssp             SEEEECCSCSCC-------TTCCH---HHHHHHHHHHHHHHHHHHHHH---CTTSEEEECSS
T ss_pred             CEEEEeCCCCCC-------CCCCH---HHHHHHHHHHHHHHHHHHHHH---CCCcEEEEecC
Confidence            999999996421       12243   334566665544444544443   35577888775

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=95.45  E-value=0.014  Score=51.55  Aligned_cols=43  Identities=26%  Similarity=0.438  Sum_probs=36.5

Q ss_pred             CC-EEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhh
Q 021960           31 GK-VAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLAS   73 (305)
Q Consensus        31 ~k-~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~   73 (305)
                      |+ ++||+||+|++|...+..+...|++|+.+++++.+.+.+.+
T Consensus       150 g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~  193 (330)
T 1tt7_A          150 EKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQ  193 (330)
T ss_dssp             GGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHH
T ss_pred             CCceEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence            44 89999999999999999888899999999988777665543

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=95.43  E-value=0.061  Score=46.75  Aligned_cols=38  Identities=24%  Similarity=0.399  Sum_probs=34.4

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecC
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVE   64 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~   64 (305)
                      .++.||.++|.|+++-+|+.++..|...|++|.++.|.
T Consensus       161 i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~  198 (300)
T 4a26_A          161 IEMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSG  198 (300)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence            46789999999998889999999999999999999774

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=95.40  E-value=0.011  Score=52.92  Aligned_cols=36  Identities=19%  Similarity=0.374  Sum_probs=30.5

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCc
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVED   65 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~   65 (305)
                      .|++|||+||+|++|...+..+...|++++++.+..
T Consensus       167 ~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~  202 (357)
T 1zsy_A          167 PGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDR  202 (357)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCC
T ss_pred             CCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCc
Confidence            588999999999999999888778899887776543

>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}

Probab=95.37  E-value=0.096  Score=43.01  Aligned_cols=76  Identities=14%  Similarity=0.184  Sum_probs=50.5

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRL  107 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~i  107 (305)
                      .++.+++.|.| .|.+|.+++..|++.|++|++.+|++.       ...+.++.++.+  . ..+++.+++++.+... =
T Consensus        16 ~~~~~~I~iiG-~G~mG~~la~~l~~~g~~V~~~~~~~~-------~~~~aD~vi~av--~-~~~~~~v~~~l~~~~~-~   83 (209)
T 2raf_A           16 YFQGMEITIFG-KGNMGQAIGHNFEIAGHEVTYYGSKDQ-------ATTLGEIVIMAV--P-YPALAALAKQYATQLK-G   83 (209)
T ss_dssp             ----CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECTTCC-------CSSCCSEEEECS--C-HHHHHHHHHHTHHHHT-T
T ss_pred             ccCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCCHH-------HhccCCEEEEcC--C-cHHHHHHHHHHHHhcC-C
Confidence            45677899999 689999999999999999999988765       122334444433  3 6677777777655443 2


Q ss_pred             cEEEEcCC
Q 021960          108 DILYNNAG  115 (305)
Q Consensus       108 d~li~nag  115 (305)
                      .++|..+.
T Consensus        84 ~~vi~~~~   91 (209)
T 2raf_A           84 KIVVDITN   91 (209)
T ss_dssp             SEEEECCC
T ss_pred             CEEEEECC
Confidence            35565544

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=95.34  E-value=0.075  Score=44.95  Aligned_cols=76  Identities=16%  Similarity=0.204  Sum_probs=53.5

Q ss_pred             EEEEecCCCchHHHHHHHHHHc-CCeEEEE-ecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEE
Q 021960           33 VAIITGGARGIGEAAVRLFARH-GAKVVIA-DVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDIL  110 (305)
Q Consensus        33 ~vlVtGas~giG~~ia~~l~~~-g~~vv~~-~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~l  110 (305)
                      .++|.|++|.+|+.+++.+.+. ++.++.+ ++.+. .+.+..  ...+   +.+|+++++.+...++...+.  .+++|
T Consensus         2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~d-l~~~~~--~~~D---vvIDfT~p~a~~~~~~~a~~~--g~~~V   73 (245)
T 1p9l_A            2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDP-LSLLTD--GNTE---VVIDFTHPDVVMGNLEFLIDN--GIHAV   73 (245)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCC-THHHHH--TTCC---EEEECSCTTTHHHHHHHHHHT--TCEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCC-HHHHhc--cCCc---EEEEccChHHHHHHHHHHHHc--CCCEE
Confidence            5899999999999999999865 8887754 44332 222221  1222   567999999888887766554  57888


Q ss_pred             EEcCCC
Q 021960          111 YNNAGV  116 (305)
Q Consensus       111 i~nag~  116 (305)
                      |...|.
T Consensus        74 igTTG~   79 (245)
T 1p9l_A           74 VGTTGF   79 (245)
T ss_dssp             ECCCCC
T ss_pred             EcCCCC
Confidence            877763

>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A

Probab=95.30  E-value=0.088  Score=47.39  Aligned_cols=71  Identities=20%  Similarity=0.241  Sum_probs=51.6

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRL  107 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~i  107 (305)
                      .+.+++++|.|+ |.+|+.+++.+.+.|++|++++.......  ....    -..+..|..|.+.+.+++++       +
T Consensus         9 ~~~~~~IlIlG~-G~lg~~la~aa~~lG~~viv~d~~~~~p~--~~~a----d~~~~~~~~d~~~l~~~~~~-------~   74 (377)
T 3orq_A            9 LKFGATIGIIGG-GQLGKMMAQSAQKMGYKVVVLDPSEDCPC--RYVA----HEFIQAKYDDEKALNQLGQK-------C   74 (377)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCTTCTT--GGGS----SEEEECCTTCHHHHHHHHHH-------C
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCChh--hhhC----CEEEECCCCCHHHHHHHHHh-------C
Confidence            456899999996 78999999999999999999987543211  1111    13566899999888887753       6


Q ss_pred             cEEEE
Q 021960          108 DILYN  112 (305)
Q Consensus       108 d~li~  112 (305)
                      |+++.
T Consensus        75 dvi~~   79 (377)
T 3orq_A           75 DVITY   79 (377)
T ss_dssp             SEEEE
T ss_pred             Cccee
Confidence            76643

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=95.27  E-value=0.9  Score=42.75  Aligned_cols=161  Identities=11%  Similarity=0.069  Sum_probs=95.9

Q ss_pred             eeccCCCCC----CCCCCCCEEEEecCCC-chHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHH
Q 021960           17 LAWDDAPPS----HRRLEGKVAIITGGAR-GIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEE   91 (305)
Q Consensus        17 ~~~~~~~~~----~~~l~~k~vlVtGas~-giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~   91 (305)
                      ..|...+..    .....|.|.++....+ +++..++..|.++|.+|+.+.....                     .|.+
T Consensus        32 ~~W~~~~~~~~~~~~~~~g~wlv~~~~~~~~~~~~l~~~L~~~G~~v~~v~~~~~---------------------~~~~   90 (525)
T 3qp9_A           32 IDWKRLAVADASERAGLSGRWLVVVPEDRSAEAAPVLAALSGAGADPVQLDVSPL---------------------GDRQ   90 (525)
T ss_dssp             EEEEECCCC------CCCSEEEEEEEGGGCTTTHHHHHHHHHTTCEEEEEEECTT---------------------CCHH
T ss_pred             eeeeECCCcccccCCCCCCeEEEEECCCcchHHHHHHHHHHhcCCeEEEEeCCCC---------------------CCHH
Confidence            456544333    2355677877775543 2889999999999999887643321                     1677


Q ss_pred             HHHHHHHHHH-HhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEeccc
Q 021960           92 DIENLINSTV-SRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASV  170 (305)
Q Consensus        92 ~i~~~~~~~~-~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~  170 (305)
                      .+...+++.. ...+.++.|+|..+.-....  .......        ...+.+.+.++|.+...   ....++.+++..
T Consensus        91 ~~~~~l~~~~~~~~~~~~~v~~l~~~~~~~~--~~~~~~~--------~~g~~~~l~l~qal~~~---~~~~~l~~vT~g  157 (525)
T 3qp9_A           91 RLAATLGEALAAAGGAVDGVLSLLAWDESAH--PGHPAPF--------TRGTGATLTLVQALEDA---GVAAPLWCVTHG  157 (525)
T ss_dssp             HHHHHHHHHHHHTTSCCSEEEECGGGCCCBC--TTSCTTC--------BHHHHHHHHHHHHHHHT---TCCSCEEEEEES
T ss_pred             HHHHHHHhhhhcccCCCCeEEEcccCCCCcc--ccccccc--------cchHHHHHHHHHHHHhc---CCCCcEEEEECC
Confidence            7777666333 45567899999877532210  0001111        12345667777776542   234567777765


Q ss_pred             ccccCCCCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeC
Q 021960          171 AGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISP  212 (305)
Q Consensus       171 ~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~P  212 (305)
                      +.... +....-...++++-+|.|+++.|+....++...+-+
T Consensus       158 a~~~~-~~~~~~~p~~a~l~Gl~r~~~~E~p~~~~~~vDl~~  198 (525)
T 3qp9_A          158 AVSVG-RADHVTSPAQAMVWGMGRVAALEHPERWGGLIDLPS  198 (525)
T ss_dssp             CCCCB-TTBCCSCHHHHHHHHHHHHHHHHSTTTEEEEEEECS
T ss_pred             CEeCC-CCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEEcCC
Confidence            43322 112223678899999999999998654444455543

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=95.26  E-value=0.07  Score=46.42  Aligned_cols=78  Identities=23%  Similarity=0.217  Sum_probs=51.0

Q ss_pred             CEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCcc-EE
Q 021960           32 KVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLD-IL  110 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id-~l  110 (305)
                      +++.|.||.|.+|.+++..|++.|++|++.+|+....  ..+.....++.++.+-..   .+..+++++..... .+ +|
T Consensus        22 ~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~~~--~~~~~~~aDvVilavp~~---~~~~vl~~l~~~l~-~~~iv   95 (298)
T 2pv7_A           22 HKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAV--AESILANADVVIVSVPIN---LTLETIERLKPYLT-ENMLL   95 (298)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGG--HHHHHTTCSEEEECSCGG---GHHHHHHHHGGGCC-TTSEE
T ss_pred             CEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCcccC--HHHHhcCCCEEEEeCCHH---HHHHHHHHHHhhcC-CCcEE
Confidence            5789999899999999999999999999999876431  222233445655544332   36666666644332 33 44


Q ss_pred             EEcCC
Q 021960          111 YNNAG  115 (305)
Q Consensus       111 i~nag  115 (305)
                      +..++
T Consensus        96 ~~~~s  100 (298)
T 2pv7_A           96 ADLTS  100 (298)
T ss_dssp             EECCS
T ss_pred             EECCC
Confidence            44443

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*

Probab=95.20  E-value=0.017  Score=47.78  Aligned_cols=57  Identities=18%  Similarity=0.097  Sum_probs=33.3

Q ss_pred             ceeeeccCCCCCCCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhH
Q 021960           14 IHVLAWDDAPPSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVL   71 (305)
Q Consensus        14 ~~~~~~~~~~~~~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~   71 (305)
                      .|.++.+...........+++.|+| +|.+|.++++.|++.|++|++.+|+....+.+
T Consensus        11 ~~~~~~~~~~~~~~~~~~~~I~iiG-~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~~   67 (215)
T 2vns_A           11 SLHLVDSDSSLAKVPDEAPKVGILG-SGDFARSLATRLVGSGFKVVVGSRNPKRTARL   67 (215)
T ss_dssp             ------------------CCEEEEC-CSHHHHHHHHHHHHTTCCEEEEESSHHHHHHH
T ss_pred             cceeecccccccCCCCCCCEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            4555555544322212345788998 79999999999999999999999987655443

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=95.19  E-value=0.023  Score=49.88  Aligned_cols=73  Identities=19%  Similarity=0.253  Sum_probs=49.1

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEE
Q 021960           31 GKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDIL  110 (305)
Q Consensus        31 ~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~l  110 (305)
                      ++ +||+||+|++|...+..+...|++|+.+++++.+.+.+.+ +... ..   +|..+.+.    ++++  ..+.+|++
T Consensus       148 g~-VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~~-lGa~-~v---i~~~~~~~----~~~~--~~~~~d~v  215 (324)
T 3nx4_A          148 GE-VVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLKS-LGAN-RI---LSRDEFAE----SRPL--EKQLWAGA  215 (324)
T ss_dssp             CC-EEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHH-HTCS-EE---EEGGGSSC----CCSS--CCCCEEEE
T ss_pred             Ce-EEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-cCCC-EE---EecCCHHH----HHhh--cCCCccEE
Confidence            45 9999999999999999888999999999988877766644 3222 11   23322111    1111  11368999


Q ss_pred             EEcCC
Q 021960          111 YNNAG  115 (305)
Q Consensus       111 i~nag  115 (305)
                      |.+.|
T Consensus       216 ~d~~g  220 (324)
T 3nx4_A          216 IDTVG  220 (324)
T ss_dssp             EESSC
T ss_pred             EECCC
Confidence            98876

>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*

Probab=95.15  E-value=0.073  Score=47.22  Aligned_cols=36  Identities=17%  Similarity=0.300  Sum_probs=30.6

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCC-eEEEEecC
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGA-KVVIADVE   64 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~-~vv~~~r~   64 (305)
                      .+.+++|+|.|+ ||+|.++++.|+..|. ++.+++.+
T Consensus        31 kL~~~~VlIvGa-GGlGs~va~~La~aGVg~ItlvD~D   67 (340)
T 3rui_A           31 IIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNG   67 (340)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred             HHhCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEecCC
Confidence            557899999997 7999999999999998 57777654

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=95.14  E-value=0.026  Score=52.49  Aligned_cols=73  Identities=15%  Similarity=0.139  Sum_probs=56.0

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEE
Q 021960           31 GKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDIL  110 (305)
Q Consensus        31 ~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~l  110 (305)
                      ...++|.|+ |.+|..+|+.|.++|++|++++.++...+.+.+.+   .+.++..|.++.+.++++=      ...-|.+
T Consensus         3 ~M~iiI~G~-G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~---~~~~i~Gd~~~~~~L~~Ag------i~~ad~~   72 (461)
T 4g65_A            3 AMKIIILGA-GQVGGTLAENLVGENNDITIVDKDGDRLRELQDKY---DLRVVNGHASHPDVLHEAG------AQDADML   72 (461)
T ss_dssp             CEEEEEECC-SHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS---SCEEEESCTTCHHHHHHHT------TTTCSEE
T ss_pred             cCEEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc---CcEEEEEcCCCHHHHHhcC------CCcCCEE
Confidence            346888887 79999999999999999999999987776665443   3678889999987666541      1246777


Q ss_pred             EEc
Q 021960          111 YNN  113 (305)
Q Consensus       111 i~n  113 (305)
                      |..
T Consensus        73 ia~   75 (461)
T 4g65_A           73 VAV   75 (461)
T ss_dssp             EEC
T ss_pred             EEE
Confidence            754

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=95.11  E-value=0.12  Score=45.46  Aligned_cols=111  Identities=15%  Similarity=0.095  Sum_probs=61.6

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHcCC--eEEEEecCcchhhhHhhhcCCC-----CeEEEEecCCCHHHHHHHHHHHHHh
Q 021960           31 GKVAIITGGARGIGEAAVRLFARHGA--KVVIADVEDTLGSVLASTLAPA-----PVTFVHCDVSLEEDIENLINSTVSR  103 (305)
Q Consensus        31 ~k~vlVtGas~giG~~ia~~l~~~g~--~vv~~~r~~~~~~~~~~~~~~~-----~v~~~~~D~~d~~~i~~~~~~~~~~  103 (305)
                      ..++.|+|+ |.+|..++..|+..|.  .|++++.++.+.+.....+...     .+.+.   ..+.           +.
T Consensus         7 ~~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~---~~~~-----------~a   71 (318)
T 1y6j_A            7 RSKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLY---AGDY-----------SD   71 (318)
T ss_dssp             CCCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----CG-----------GG
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEE---ECCH-----------HH
Confidence            357889998 9999999999999987  7999998865543222222111     12111   1121           12


Q ss_pred             cCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecc
Q 021960          104 YGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTAS  169 (305)
Q Consensus       104 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS  169 (305)
                      +..-|++|..+|.....       ..+..   ..+..|+.....+.+.+.++   .+.+.++++|-
T Consensus        72 ~~~aDvVii~~g~p~k~-------g~~r~---dl~~~n~~i~~~i~~~i~~~---~p~a~viv~tN  124 (318)
T 1y6j_A           72 VKDCDVIVVTAGANRKP-------GETRL---DLAKKNVMIAKEVTQNIMKY---YNHGVILVVSN  124 (318)
T ss_dssp             GTTCSEEEECCCC-------------CHH---HHHHHHHHHHHHHHHHHHHH---CCSCEEEECSS
T ss_pred             hCCCCEEEEcCCCCCCC-------CcCHH---HHHHhhHHHHHHHHHHHHHh---CCCcEEEEecC
Confidence            34689999999864211       11222   34566665544444444443   35566777654

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=95.10  E-value=0.066  Score=47.42  Aligned_cols=117  Identities=11%  Similarity=0.042  Sum_probs=68.1

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHcCC--eEEEEecCcchhhhHhhhcC-----CCCeEEEEecCCCHHHHHHHHHHHH
Q 021960           29 LEGKVAIITGGARGIGEAAVRLFARHGA--KVVIADVEDTLGSVLASTLA-----PAPVTFVHCDVSLEEDIENLINSTV  101 (305)
Q Consensus        29 l~~k~vlVtGas~giG~~ia~~l~~~g~--~vv~~~r~~~~~~~~~~~~~-----~~~v~~~~~D~~d~~~i~~~~~~~~  101 (305)
                      ...+.+.|+|+ |.+|.+++..|+..|.  .|++.++++...+.....+.     ......+..  .|.+          
T Consensus        17 ~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~--~d~~----------   83 (331)
T 4aj2_A           17 VPQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSS--KDYS----------   83 (331)
T ss_dssp             CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEEC--SSGG----------
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEc--CCHH----------
Confidence            35678999997 9999999999999987  79999987654332221111     011112211  2321          


Q ss_pred             HhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEeccccc
Q 021960          102 SRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAG  172 (305)
Q Consensus       102 ~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~  172 (305)
                       ....-|++|..||.....       ..+..   ..++.|..-...+.+.+..+   .+.+.++++|-...
T Consensus        84 -~~~~aDiVvi~aG~~~kp-------G~tR~---dL~~~N~~I~~~i~~~i~~~---~p~a~vlvvtNPvd  140 (331)
T 4aj2_A           84 -VTANSKLVIITAGARQQE-------GESRL---NLVQRNVNIFKFIIPNVVKY---SPQCKLLIVSNPVD  140 (331)
T ss_dssp             -GGTTEEEEEECCSCCCCT-------TCCGG---GGHHHHHHHHHHHHHHHHHH---CTTCEEEECSSSHH
T ss_pred             -HhCCCCEEEEccCCCCCC-------CccHH---HHHHHHHHHHHHHHHHHHHH---CCCeEEEEecChHH
Confidence             123689999999974221       12222   24556655444444444432   45578888876443

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=95.07  E-value=0.085  Score=46.38  Aligned_cols=83  Identities=11%  Similarity=0.115  Sum_probs=55.2

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhh-----------cCCCCeEEEEecCCCHHHHHHHHH
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLAST-----------LAPAPVTFVHCDVSLEEDIENLIN   98 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~-----------~~~~~v~~~~~D~~d~~~i~~~~~   98 (305)
                      ..+++.|.|. |.+|..++..|++.|++|++.+|+....+.+.+.           ....++  +..=+.+...++.++.
T Consensus        30 ~~~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~e~~~~aDv--Vi~~vp~~~~~~~v~~  106 (320)
T 4dll_A           30 YARKITFLGT-GSMGLPMARRLCEAGYALQVWNRTPARAASLAALGATIHEQARAAARDADI--VVSMLENGAVVQDVLF  106 (320)
T ss_dssp             CCSEEEEECC-TTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCEEESSHHHHHTTCSE--EEECCSSHHHHHHHHT
T ss_pred             CCCEEEEECc-cHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCEeeCCHHHHHhcCCE--EEEECCCHHHHHHHHc
Confidence            4568888875 8999999999999999999999987665544321           122223  3344556677777765


Q ss_pred             --HHHHhcCCccEEEEcCC
Q 021960           99 --STVSRYGRLDILYNNAG  115 (305)
Q Consensus        99 --~~~~~~g~id~li~nag  115 (305)
                        .+.+...+=.+||+...
T Consensus       107 ~~~~~~~l~~~~~vi~~st  125 (320)
T 4dll_A          107 AQGVAAAMKPGSLFLDMAS  125 (320)
T ss_dssp             TTCHHHHCCTTCEEEECSC
T ss_pred             chhHHhhCCCCCEEEecCC
Confidence              55544433455666543

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=95.06  E-value=0.044  Score=47.30  Aligned_cols=38  Identities=29%  Similarity=0.503  Sum_probs=34.6

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecC
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVE   64 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~   64 (305)
                      .++.||.++|.|+++-+|+.++..|+..|++|.++.++
T Consensus       156 i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~  193 (285)
T 3p2o_A          156 IDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIK  193 (285)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence            46789999999999889999999999999999998764

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=95.05  E-value=0.045  Score=48.55  Aligned_cols=77  Identities=18%  Similarity=0.247  Sum_probs=48.8

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHc-CCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcC--C
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARH-GAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYG--R  106 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~-g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g--~  106 (305)
                      .|.++||.|+ |++|...+..++.. |++|+.+++++.+.+...+ +...    ..+|.++.+..++    +.+..+  .
T Consensus       163 ~g~~VlV~Ga-G~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~-~Ga~----~~i~~~~~~~~~~----v~~~t~g~g  232 (348)
T 4eez_A          163 PGDWQVIFGA-GGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKK-IGAD----VTINSGDVNPVDE----IKKITGGLG  232 (348)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHH-TTCS----EEEEC-CCCHHHH----HHHHTTSSC
T ss_pred             CCCEEEEEcC-CCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhh-cCCe----EEEeCCCCCHHHH----hhhhcCCCC
Confidence            4789999987 78888777777765 7899999998877655443 2222    2245555433333    333322  4


Q ss_pred             ccEEEEcCCC
Q 021960          107 LDILYNNAGV  116 (305)
Q Consensus       107 id~li~nag~  116 (305)
                      +|.++.+++.
T Consensus       233 ~d~~~~~~~~  242 (348)
T 4eez_A          233 VQSAIVCAVA  242 (348)
T ss_dssp             EEEEEECCSC
T ss_pred             ceEEEEeccC
Confidence            7788887763

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1

Probab=95.00  E-value=0.031  Score=50.22  Aligned_cols=46  Identities=26%  Similarity=0.381  Sum_probs=38.9

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhh
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLAST   74 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~   74 (305)
                      +++||+++|.|. |.+|..+|+.|.+.|++|++.+++....+...+.
T Consensus       170 ~L~GktV~V~G~-G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~  215 (364)
T 1leh_A          170 SLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAE  215 (364)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH
T ss_pred             CCCcCEEEEECc-hHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH
Confidence            689999999996 8999999999999999999988876655544443

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=94.98  E-value=0.026  Score=49.99  Aligned_cols=72  Identities=17%  Similarity=0.181  Sum_probs=54.2

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEE
Q 021960           31 GKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDIL  110 (305)
Q Consensus        31 ~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~l  110 (305)
                      .+.++|.|+ |.+|..+++.|.++|. |++++++++..+ +.+    ..+.++..|.+|.+.++++      ...+.|.+
T Consensus       115 ~~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~----~~~~~i~gd~~~~~~L~~a------~i~~a~~v  181 (336)
T 1lnq_A          115 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKK-VLR----SGANFVHGDPTRVSDLEKA------NVRGARAV  181 (336)
T ss_dssp             -CEEEEESC-CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HHH----TTCEEEESCTTSHHHHHHT------CSTTEEEE
T ss_pred             cCCEEEECC-cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HHh----CCcEEEEeCCCCHHHHHhc------ChhhccEE
Confidence            457999996 8999999999999999 999998877665 432    2478899999998776654      11256777


Q ss_pred             EEcCC
Q 021960          111 YNNAG  115 (305)
Q Consensus       111 i~nag  115 (305)
                      |...+
T Consensus       182 i~~~~  186 (336)
T 1lnq_A          182 IVDLE  186 (336)
T ss_dssp             EECCS
T ss_pred             EEcCC
Confidence            76543

>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A

Probab=94.93  E-value=0.11  Score=47.47  Aligned_cols=72  Identities=14%  Similarity=0.123  Sum_probs=52.7

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCC
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGR  106 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~  106 (305)
                      +.+.+++++|.|+ |.+|+.+++.+.+.|++|++++........  ...    -..+..|..|.+.+.++++       +
T Consensus        31 ~~~~~~~IlIlG~-G~lg~~~~~aa~~lG~~v~v~d~~~~~p~~--~~a----d~~~~~~~~d~~~l~~~a~-------~   96 (419)
T 4e4t_A           31 PILPGAWLGMVGG-GQLGRMFCFAAQSMGYRVAVLDPDPASPAG--AVA----DRHLRAAYDDEAALAELAG-------L   96 (419)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCTTCHHH--HHS----SEEECCCTTCHHHHHHHHH-------H
T ss_pred             cCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCCcCchh--hhC----CEEEECCcCCHHHHHHHHh-------c
Confidence            3567899999986 689999999999999999998765332211  111    1245588899988888773       4


Q ss_pred             ccEEEE
Q 021960          107 LDILYN  112 (305)
Q Consensus       107 id~li~  112 (305)
                      +|+|+.
T Consensus        97 ~D~V~~  102 (419)
T 4e4t_A           97 CEAVST  102 (419)
T ss_dssp             CSEEEE
T ss_pred             CCEEEE
Confidence            888884

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=94.89  E-value=0.021  Score=56.75  Aligned_cols=76  Identities=21%  Similarity=0.303  Sum_probs=49.7

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcC--Cc
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYG--RL  107 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g--~i  107 (305)
                      .|++|||.||+|++|...+......|++|+.+.++++ .+.+.  +....    .+|..+.+    +.+.+.+..+  .+
T Consensus       345 ~G~~VLI~gaaGgvG~~aiqlAk~~Ga~V~~t~~~~k-~~~l~--lga~~----v~~~~~~~----~~~~i~~~t~g~Gv  413 (795)
T 3slk_A          345 PGESLLVHSAAGGVGMAAIQLARHLGAEVYATASEDK-WQAVE--LSREH----LASSRTCD----FEQQFLGATGGRGV  413 (795)
T ss_dssp             TTCCEEEESTTBHHHHHHHHHHHHTTCCEEEECCGGG-GGGSC--SCGGG----EECSSSST----HHHHHHHHSCSSCC
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeChHH-hhhhh--cChhh----eeecCChh----HHHHHHHHcCCCCe
Confidence            5889999999999999999888889999998876652 22221  22121    13444432    2333444332  49


Q ss_pred             cEEEEcCCC
Q 021960          108 DILYNNAGV  116 (305)
Q Consensus       108 d~li~nag~  116 (305)
                      |+++++.|.
T Consensus       414 DvVld~~gg  422 (795)
T 3slk_A          414 DVVLNSLAG  422 (795)
T ss_dssp             SEEEECCCT
T ss_pred             EEEEECCCc
Confidence            999998763

>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A

Probab=94.81  E-value=0.07  Score=46.92  Aligned_cols=40  Identities=13%  Similarity=0.017  Sum_probs=35.7

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcc
Q 021960           26 HRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDT   66 (305)
Q Consensus        26 ~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~   66 (305)
                      ...+.||++.|.|. |.||+++|+.|...|++|+..+|+..
T Consensus       134 ~~~l~g~tvGIiG~-G~IG~~vA~~l~~~G~~V~~~dr~~~  173 (315)
T 3pp8_A          134 EYTREEFSVGIMGA-GVLGAKVAESLQAWGFPLRCWSRSRK  173 (315)
T ss_dssp             CCCSTTCCEEEECC-SHHHHHHHHHHHTTTCCEEEEESSCC
T ss_pred             CCCcCCCEEEEEee-CHHHHHHHHHHHHCCCEEEEEcCCch
Confidence            35788999999995 89999999999999999999988754

>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}

Probab=94.80  E-value=0.16  Score=43.66  Aligned_cols=82  Identities=10%  Similarity=0.026  Sum_probs=55.3

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHcCC---eEEEEecCcchhhhHhhhc------------CCCCeEEEEecCCCHHHHHH
Q 021960           31 GKVAIITGGARGIGEAAVRLFARHGA---KVVIADVEDTLGSVLASTL------------APAPVTFVHCDVSLEEDIEN   95 (305)
Q Consensus        31 ~k~vlVtGas~giG~~ia~~l~~~g~---~vv~~~r~~~~~~~~~~~~------------~~~~v~~~~~D~~d~~~i~~   95 (305)
                      .+++.|.|+ |.+|.+++..|++.|+   +|++.+|+....+.+.+..            ...++.++-+   ....++.
T Consensus         3 ~~~I~iIG~-G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~~~~~~~~~~aDvVilav---~p~~~~~   78 (280)
T 3tri_A            3 TSNITFIGG-GNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTTQDNRQGALNADVVVLAV---KPHQIKM   78 (280)
T ss_dssp             CSCEEEESC-SHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEESCHHHHHSSCSEEEECS---CGGGHHH
T ss_pred             CCEEEEEcc-cHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEeCChHHHHhcCCeEEEEe---CHHHHHH
Confidence            456888886 8999999999999998   8999999887766554431            1223433333   3456677


Q ss_pred             HHHHHHHh-cCCccEEEEcCCC
Q 021960           96 LINSTVSR-YGRLDILYNNAGV  116 (305)
Q Consensus        96 ~~~~~~~~-~g~id~li~nag~  116 (305)
                      +++++... ..+=.+||++++.
T Consensus        79 vl~~l~~~~l~~~~iiiS~~ag  100 (280)
T 3tri_A           79 VCEELKDILSETKILVISLAVG  100 (280)
T ss_dssp             HHHHHHHHHHTTTCEEEECCTT
T ss_pred             HHHHHHhhccCCCeEEEEecCC
Confidence            77777654 4322377877654

>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}

Probab=94.79  E-value=0.038  Score=46.09  Aligned_cols=61  Identities=16%  Similarity=0.258  Sum_probs=42.8

Q ss_pred             CCCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCC
Q 021960           25 SHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVS   88 (305)
Q Consensus        25 ~~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~   88 (305)
                      ...+++|+.+||.|| |.+|...++.|++.|++|++++.+...  .+.+.....++.++.-++.
T Consensus        25 ifl~L~gk~VLVVGg-G~va~~ka~~Ll~~GA~VtVvap~~~~--~l~~l~~~~~i~~i~~~~~   85 (223)
T 3dfz_A           25 VMLDLKGRSVLVVGG-GTIATRRIKGFLQEGAAITVVAPTVSA--EINEWEAKGQLRVKRKKVG   85 (223)
T ss_dssp             EEECCTTCCEEEECC-SHHHHHHHHHHGGGCCCEEEECSSCCH--HHHHHHHTTSCEEECSCCC
T ss_pred             cEEEcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCCCH--HHHHHHHcCCcEEEECCCC
Confidence            344789999999997 699999999999999999999865432  1222222234566554443

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=94.74  E-value=0.046  Score=47.66  Aligned_cols=72  Identities=17%  Similarity=0.249  Sum_probs=50.5

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCC
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGR  106 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~  106 (305)
                      ..+.+++++|.|+ |+||+++++.|...|++|++.+|+....+.+.+ . +  +..+  +.   +++++++       ..
T Consensus       153 ~~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~-~-g--~~~~--~~---~~l~~~l-------~~  215 (300)
T 2rir_A          153 YTIHGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHLARITE-M-G--LVPF--HT---DELKEHV-------KD  215 (300)
T ss_dssp             SCSTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-T-T--CEEE--EG---GGHHHHS-------TT
T ss_pred             CCCCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-C-C--CeEE--ch---hhHHHHh-------hC
Confidence            4678999999996 899999999999999999999998755443322 1 2  2222  11   2233322       36


Q ss_pred             ccEEEEcCC
Q 021960          107 LDILYNNAG  115 (305)
Q Consensus       107 id~li~nag  115 (305)
                      .|+||.+..
T Consensus       216 aDvVi~~~p  224 (300)
T 2rir_A          216 IDICINTIP  224 (300)
T ss_dssp             CSEEEECCS
T ss_pred             CCEEEECCC
Confidence            899998765

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=94.73  E-value=0.21  Score=42.95  Aligned_cols=40  Identities=15%  Similarity=0.197  Sum_probs=34.7

Q ss_pred             CEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhH
Q 021960           32 KVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVL   71 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~   71 (305)
                      +++.|.|++|.+|.++++.|++.|++|++.+|+....+.+
T Consensus        12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~   51 (286)
T 3c24_A           12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRL   51 (286)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHH
Confidence            4799999999999999999999999999999987655444

>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*

Probab=94.72  E-value=0.17  Score=45.53  Aligned_cols=72  Identities=21%  Similarity=0.187  Sum_probs=50.8

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCC
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGR  106 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~  106 (305)
                      +.+.+|+++|.|+ |.+|+.+++.+.+.|++|++++.......  .. .  . -..+..|..|.+.+.++++       .
T Consensus        10 ~~~~~k~IlIlG~-G~~g~~la~aa~~~G~~vi~~d~~~~~~~--~~-~--a-d~~~~~~~~d~~~l~~~~~-------~   75 (389)
T 3q2o_A           10 IILPGKTIGIIGG-GQLGRMMALAAKEMGYKIAVLDPTKNSPC--AQ-V--A-DIEIVASYDDLKAIQHLAE-------I   75 (389)
T ss_dssp             CCCTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSTTCTT--TT-T--C-SEEEECCTTCHHHHHHHHH-------T
T ss_pred             cCCCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCCch--HH-h--C-CceEecCcCCHHHHHHHHH-------h
Confidence            3467899999996 57999999999999999999976542211  00 0  1 1235578889888877775       3


Q ss_pred             ccEEEE
Q 021960          107 LDILYN  112 (305)
Q Consensus       107 id~li~  112 (305)
                      .|++..
T Consensus        76 ~dvI~~   81 (389)
T 3q2o_A           76 SDVVTY   81 (389)
T ss_dssp             CSEEEE
T ss_pred             CCEeee
Confidence            676643

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=94.65  E-value=0.029  Score=48.28  Aligned_cols=45  Identities=22%  Similarity=0.342  Sum_probs=37.8

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhh
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLAS   73 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~   73 (305)
                      ++.+++++|.|+ |++|++++..|.+.|++|.+++|+.++.+.+.+
T Consensus       126 ~~~~~~v~iiGa-G~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~  170 (275)
T 2hk9_A          126 EVKEKSILVLGA-GGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQ  170 (275)
T ss_dssp             TGGGSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSHHHHHHHTT
T ss_pred             CcCCCEEEEECc-hHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHH
Confidence            467899999996 799999999999999999999998766555443

>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}

Probab=94.59  E-value=0.07  Score=49.34  Aligned_cols=38  Identities=37%  Similarity=0.480  Sum_probs=34.1

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCc
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVED   65 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~   65 (305)
                      ..+++|.++|.|. |+.|.++|+.|+++|+.|.+.+++.
T Consensus         5 ~~~~~k~v~viG~-G~sG~s~A~~l~~~G~~V~~~D~~~   42 (451)
T 3lk7_A            5 TTFENKKVLVLGL-ARSGEAAARLLAKLGAIVTVNDGKP   42 (451)
T ss_dssp             CTTTTCEEEEECC-TTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred             hhcCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEeCCc
Confidence            3567999999998 7899999999999999999999865

>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}

Probab=94.56  E-value=0.15  Score=43.20  Aligned_cols=87  Identities=13%  Similarity=0.236  Sum_probs=54.5

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHcCCe-EEEEecCcchhhhHhhhcC-----C-----CCeEEEEecCCCHHHHHHHH
Q 021960           29 LEGKVAIITGGARGIGEAAVRLFARHGAK-VVIADVEDTLGSVLASTLA-----P-----APVTFVHCDVSLEEDIENLI   97 (305)
Q Consensus        29 l~~k~vlVtGas~giG~~ia~~l~~~g~~-vv~~~r~~~~~~~~~~~~~-----~-----~~v~~~~~D~~d~~~i~~~~   97 (305)
                      +.+.++.|.|+ |.+|..++..|++.|++ |.+.+|+....+.+.+...     .     .+..++..=+ -...+..++
T Consensus         8 ~~~m~i~iiG~-G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~av-~~~~~~~v~   85 (266)
T 3d1l_A            8 IEDTPIVLIGA-GNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYTTDLAEVNPYAKLYIVSL-KDSAFAELL   85 (266)
T ss_dssp             GGGCCEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEESCGGGSCSCCSEEEECC-CHHHHHHHH
T ss_pred             CCCCeEEEEcC-CHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCceeCCHHHHhcCCCEEEEec-CHHHHHHHH
Confidence            33457889996 89999999999999998 8888888766554433210     0     1122222222 344667777


Q ss_pred             HHHHHhcCCccEEEEcCCCC
Q 021960           98 NSTVSRYGRLDILYNNAGVL  117 (305)
Q Consensus        98 ~~~~~~~g~id~li~nag~~  117 (305)
                      +++.+...+=.+||++.+..
T Consensus        86 ~~l~~~~~~~~ivv~~s~~~  105 (266)
T 3d1l_A           86 QGIVEGKREEALMVHTAGSI  105 (266)
T ss_dssp             HHHHTTCCTTCEEEECCTTS
T ss_pred             HHHHhhcCCCcEEEECCCCC
Confidence            77765432234677776543

>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A

Probab=94.52  E-value=0.041  Score=49.26  Aligned_cols=37  Identities=24%  Similarity=0.525  Sum_probs=31.3

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCC-eEEEEecCc
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGA-KVVIADVED   65 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~-~vv~~~r~~   65 (305)
                      .+.++.|+|.|+ ||+|.++++.|+..|. ++.+++.+.
T Consensus       115 ~L~~~~VlvvG~-GglGs~va~~La~aGvg~i~lvD~D~  152 (353)
T 3h5n_A          115 KLKNAKVVILGC-GGIGNHVSVILATSGIGEIILIDNDQ  152 (353)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEECCB
T ss_pred             HHhCCeEEEECC-CHHHHHHHHHHHhCCCCeEEEECCCc
Confidence            456889999997 8999999999999998 577887653

>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A

Probab=94.46  E-value=0.12  Score=49.33  Aligned_cols=36  Identities=17%  Similarity=0.300  Sum_probs=30.5

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCC-eEEEEecC
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGA-KVVIADVE   64 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~-~vv~~~r~   64 (305)
                      .+.++.|+|.|+ ||+|.++++.|+..|. ++.+++.+
T Consensus       323 kL~~arVLIVGa-GGLGs~vA~~La~aGVG~ItLvD~D  359 (615)
T 4gsl_A          323 IIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNG  359 (615)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred             HHhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            456889999997 7999999999999998 57777654

>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}

Probab=94.45  E-value=0.068  Score=46.42  Aligned_cols=39  Identities=28%  Similarity=0.314  Sum_probs=35.3

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcc
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDT   66 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~   66 (305)
                      ..+.|+++.|.|- |.||..+|+.|...|++|+..+|+..
T Consensus       118 ~~l~g~tvGIIGl-G~IG~~vA~~l~~~G~~V~~~dr~~~  156 (290)
T 3gvx_A          118 TLLYGKALGILGY-GGIGRRVAHLAKAFGMRVIAYTRSSV  156 (290)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSCC
T ss_pred             eeeecchheeecc-CchhHHHHHHHHhhCcEEEEEecccc
Confidence            5789999999995 89999999999999999999988754

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=94.41  E-value=0.061  Score=46.71  Aligned_cols=43  Identities=28%  Similarity=0.324  Sum_probs=37.1

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhh
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSV   70 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~   70 (305)
                      ..+.|++++|.|+ |+||+++++.|...|++|++.+|+....+.
T Consensus       151 ~~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~  193 (293)
T 3d4o_A          151 FTIHGANVAVLGL-GRVGMSVARKFAALGAKVKVGARESDLLAR  193 (293)
T ss_dssp             SCSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHH
T ss_pred             CCCCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEECCHHHHHH
Confidence            3678999999995 899999999999999999999998755433

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=94.35  E-value=0.25  Score=43.36  Aligned_cols=111  Identities=15%  Similarity=0.183  Sum_probs=62.4

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCC--eEEEEecCcchhhhHhhhc------CCCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           33 VAIITGGARGIGEAAVRLFARHGA--KVVIADVEDTLGSVLASTL------APAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        33 ~vlVtGas~giG~~ia~~l~~~g~--~vv~~~r~~~~~~~~~~~~------~~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      ++.|+|+ |.+|.+++..|+..|.  .|+++++++...+-....+      ....+.+...|  +.           +.+
T Consensus         2 kv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~--~~-----------~a~   67 (314)
T 3nep_X            2 KVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTN--DY-----------GPT   67 (314)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEES--SS-----------GGG
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECC--CH-----------HHh
Confidence            5789997 9999999999999887  7999999875533211111      01112222112  11           123


Q ss_pred             CCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC-CCCEEEEecccc
Q 021960          105 GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINR-GGGCIISTASVA  171 (305)
Q Consensus       105 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~isS~~  171 (305)
                      ..-|++|.++|.....       ..+   -...++.|..-    ++.+.+.+.+. +.+.++++|-..
T Consensus        68 ~~aDvVii~ag~~~kp-------G~~---R~dl~~~N~~i----~~~i~~~i~~~~p~a~vivvtNPv  121 (314)
T 3nep_X           68 EDSDVCIITAGLPRSP-------GMS---RDDLLAKNTEI----VGGVTEQFVEGSPDSTIIVVANPL  121 (314)
T ss_dssp             TTCSEEEECCCC-----------------CHHHHHHHHHH----HHHHHHHHHTTCTTCEEEECCSSH
T ss_pred             CCCCEEEECCCCCCCC-------CCC---HHHHHHhhHHH----HHHHHHHHHHhCCCcEEEecCCch
Confidence            4689999999864211       112   22345556544    34444444433 457777777543

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=94.30  E-value=0.23  Score=43.64  Aligned_cols=37  Identities=16%  Similarity=0.381  Sum_probs=31.1

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCC--eEEEEecCcch
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGA--KVVIADVEDTL   67 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~--~vv~~~r~~~~   67 (305)
                      +..++.|+|+ |.+|.+++..|+..|.  .|+++++++.+
T Consensus         5 ~~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~   43 (317)
T 3d0o_A            5 KGNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEK   43 (317)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhH
Confidence            4568999998 9999999999998884  79999887643

>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}

Probab=94.25  E-value=0.26  Score=43.93  Aligned_cols=36  Identities=31%  Similarity=0.429  Sum_probs=25.3

Q ss_pred             CCCEEEEecCCCch---HHHHHHHHHHcCCeEEEEecCc
Q 021960           30 EGKVAIITGGARGI---GEAAVRLFARHGAKVVIADVED   65 (305)
Q Consensus        30 ~~k~vlVtGas~gi---G~~ia~~l~~~g~~vv~~~r~~   65 (305)
                      ++|.++.+|||||-   +.++|+.|.++|++|..++...
T Consensus         2 ~~~i~i~~GGTgGHi~palala~~L~~~g~~V~~vg~~~   40 (365)
T 3s2u_A            2 KGNVLIMAGGTGGHVFPALACAREFQARGYAVHWLGTPR   40 (365)
T ss_dssp             -CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECSS
T ss_pred             CCcEEEEcCCCHHHHHHHHHHHHHHHhCCCEEEEEECCc
Confidence            44555555666553   6889999999999998776443

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*

Probab=94.18  E-value=0.46  Score=41.87  Aligned_cols=115  Identities=15%  Similarity=0.132  Sum_probs=65.3

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCC--eEEEEecCcchhhhHhhhc-CC----CCeEEEEecCCCHHHHHHHHHHHHH
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGA--KVVIADVEDTLGSVLASTL-AP----APVTFVHCDVSLEEDIENLINSTVS  102 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~--~vv~~~r~~~~~~~~~~~~-~~----~~v~~~~~D~~d~~~i~~~~~~~~~  102 (305)
                      +..++.|+|| |.+|.+++..|+..+.  .++++++++.+.+.....+ ..    ..+.+.. |  +.+.          
T Consensus         8 ~~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~-~--~~~a----------   73 (326)
T 2zqz_A            8 DHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYS-A--EYSD----------   73 (326)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEE-C--CGGG----------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEE-C--CHHH----------
Confidence            3468999998 9999999999998875  7999998765443322211 11    1232222 2  2211          


Q ss_pred             hcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEeccccc
Q 021960          103 RYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAG  172 (305)
Q Consensus       103 ~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~  172 (305)
                       +..-|+||..+|.....       ..+..   ..+..|......+.+.+..+   .+.+.++++|-...
T Consensus        74 -~~~aDvVii~ag~~~k~-------g~~R~---dl~~~n~~i~~~i~~~i~~~---~p~a~iiv~tNPv~  129 (326)
T 2zqz_A           74 -AKDADLVVITAGAPQKP-------GETRL---DLVNKNLKILKSIVDPIVDS---GFNGIFLVAANPVD  129 (326)
T ss_dssp             -GGGCSEEEECCCCC------------CHH---HHHHHHHHHHHHHHHHHHHH---TCCSEEEECSSSHH
T ss_pred             -hCCCCEEEEcCCCCCCC-------CCCHH---HHHHHHHHHHHHHHHHHHHH---CCCeEEEEeCCcHH
Confidence             23589999999864211       12333   23455554443334443332   35677888765443

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=94.15  E-value=0.095  Score=45.18  Aligned_cols=38  Identities=18%  Similarity=0.231  Sum_probs=34.3

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecC
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVE   64 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~   64 (305)
                      .++.||.++|.|.|+-+|+.++..|+..|++|.++.+.
T Consensus       157 i~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~  194 (286)
T 4a5o_A          157 ADLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRF  194 (286)
T ss_dssp             CCCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTT
T ss_pred             CCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCC
Confidence            46789999999998889999999999999999998664

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=94.11  E-value=0.097  Score=44.89  Aligned_cols=36  Identities=8%  Similarity=0.151  Sum_probs=33.2

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecC
Q 021960           29 LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVE   64 (305)
Q Consensus        29 l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~   64 (305)
                      +.||.++|.|+++-+|+.++..|...|++|.++.++
T Consensus       148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~  183 (276)
T 3ngx_A          148 YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSK  183 (276)
T ss_dssp             CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred             cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCC
Confidence            789999999998889999999999999999998654

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=94.00  E-value=0.37  Score=41.96  Aligned_cols=36  Identities=17%  Similarity=0.270  Sum_probs=31.4

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCC--eEEEEecCcchhh
Q 021960           33 VAIITGGARGIGEAAVRLFARHGA--KVVIADVEDTLGS   69 (305)
Q Consensus        33 ~vlVtGas~giG~~ia~~l~~~g~--~vv~~~r~~~~~~   69 (305)
                      ++.|+|+ |.+|..++..|+..|.  .|++.++++.+.+
T Consensus         2 kI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~   39 (304)
T 2v6b_A            2 KVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQ   39 (304)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHH
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHH
Confidence            6789998 9999999999999998  8999999875443

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=93.99  E-value=0.11  Score=44.79  Aligned_cols=38  Identities=21%  Similarity=0.324  Sum_probs=33.9

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecC
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVE   64 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~   64 (305)
                      .++.||.++|.|+++=+|+.++..|...|++|.++.++
T Consensus       157 i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~  194 (285)
T 3l07_A          157 IKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRF  194 (285)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred             CCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCC
Confidence            36789999999998879999999999999999988654

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=93.91  E-value=0.4  Score=41.83  Aligned_cols=37  Identities=19%  Similarity=0.301  Sum_probs=31.8

Q ss_pred             CEEEEecCCCchHHHHHHHHHHcCC-eEEEEecCcchhh
Q 021960           32 KVAIITGGARGIGEAAVRLFARHGA-KVVIADVEDTLGS   69 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~g~-~vv~~~r~~~~~~   69 (305)
                      +++.|+|| |.+|..++..|+..|. +|+++++++.+.+
T Consensus         3 ~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~   40 (309)
T 1ur5_A            3 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQ   40 (309)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHH
Confidence            47899998 9999999999999996 8999998875543

>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A

Probab=93.88  E-value=0.1  Score=49.74  Aligned_cols=35  Identities=17%  Similarity=0.316  Sum_probs=29.6

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCC-eEEEEec
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGA-KVVIADV   63 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~-~vv~~~r   63 (305)
                      .+.++.|+|.|+ ||+|.++++.|+..|. ++.+++.
T Consensus       324 kL~~~kVLIVGa-GGLGs~va~~La~aGVG~ItLvD~  359 (598)
T 3vh1_A          324 IIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDN  359 (598)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHTTTCCEEEEECC
T ss_pred             HHhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEECC
Confidence            456789999996 7999999999999998 5777754

>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}

Probab=93.85  E-value=0.27  Score=43.68  Aligned_cols=39  Identities=21%  Similarity=0.130  Sum_probs=35.2

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCc
Q 021960           26 HRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVED   65 (305)
Q Consensus        26 ~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~   65 (305)
                      ...+.||++.|.|- |.||+++|+.|...|++|+..+|+.
T Consensus       168 g~~l~gktvGIIGl-G~IG~~vA~~l~~~G~~V~~~dr~~  206 (345)
T 4g2n_A          168 GMGLTGRRLGIFGM-GRIGRAIATRARGFGLAIHYHNRTR  206 (345)
T ss_dssp             BCCCTTCEEEEESC-SHHHHHHHHHHHTTTCEEEEECSSC
T ss_pred             ccccCCCEEEEEEe-ChhHHHHHHHHHHCCCEEEEECCCC
Confidence            35789999999994 8999999999999999999998875

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=93.84  E-value=0.96  Score=39.17  Aligned_cols=111  Identities=14%  Similarity=0.103  Sum_probs=64.8

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCC--eEEEEecCcchhhh----Hhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           33 VAIITGGARGIGEAAVRLFARHGA--KVVIADVEDTLGSV----LASTL--APAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        33 ~vlVtGas~giG~~ia~~l~~~g~--~vv~~~r~~~~~~~----~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      ++.|+|+ |.+|.+++..|+..|.  .|++.++++...+.    +....  ......+...  +|.+.           .
T Consensus         2 kI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d~~a-----------~   67 (294)
T 1oju_A            2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADYSL-----------L   67 (294)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SCGGG-----------G
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEe--CCHHH-----------h
Confidence            5789999 9999999999999987  89999998765431    11111  1111222211  12211           1


Q ss_pred             CCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC-CCCEEEEecccc
Q 021960          105 GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINR-GGGCIISTASVA  171 (305)
Q Consensus       105 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~isS~~  171 (305)
                      ..-|++|..+|.....       ..+..+   .++.|..-    ++.+.+.+.+. +.+.++++|-..
T Consensus        68 ~~aDiVViaag~~~kp-------G~~R~d---l~~~N~~i----~~~i~~~i~~~~p~a~iivvsNPv  121 (294)
T 1oju_A           68 KGSEIIVVTAGLARKP-------GMTRLD---LAHKNAGI----IKDIAKKIVENAPESKILVVTNPM  121 (294)
T ss_dssp             TTCSEEEECCCCCCCS-------SCCHHH---HHHHHHHH----HHHHHHHHHTTSTTCEEEECSSSH
T ss_pred             CCCCEEEECCCCCCCC-------CCcHHH---HHHHHHHH----HHHHHHHHHhhCCCeEEEEeCCcc
Confidence            3579999999864221       124433   35555433    44444555444 457777777543

>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*

Probab=93.84  E-value=0.46  Score=41.15  Aligned_cols=37  Identities=24%  Similarity=0.391  Sum_probs=32.3

Q ss_pred             CEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhh
Q 021960           32 KVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGS   69 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~   69 (305)
                      +++.|.|+ |.+|..+|..|++.|++|++.++++...+
T Consensus        16 ~~I~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~   52 (302)
T 1f0y_A           16 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILA   52 (302)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHH
Confidence            57889997 89999999999999999999999865543

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}

Probab=93.75  E-value=0.12  Score=45.83  Aligned_cols=76  Identities=13%  Similarity=0.178  Sum_probs=44.5

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcC-CeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHG-AKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLD  108 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g-~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id  108 (305)
                      .|++|||+|++|++|...+..+...| .+|+.+.+ +.+.+.+.  ....  .+  +| .+.+-.+. +.++.  -+.+|
T Consensus       142 ~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~~-~~~~~~~~--~ga~--~~--~~-~~~~~~~~-~~~~~--~~g~D  210 (349)
T 4a27_A          142 EGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTAS-TFKHEAIK--DSVT--HL--FD-RNADYVQE-VKRIS--AEGVD  210 (349)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEEC-GGGHHHHG--GGSS--EE--EE-TTSCHHHH-HHHHC--TTCEE
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeCC-HHHHHHHH--cCCc--EE--Ec-CCccHHHH-HHHhc--CCCce
Confidence            58899999999999998887665564 57777663 33333333  2211  12  23 33222222 22221  13699


Q ss_pred             EEEEcCCC
Q 021960          109 ILYNNAGV  116 (305)
Q Consensus       109 ~li~nag~  116 (305)
                      ++|.+.|.
T Consensus       211 vv~d~~g~  218 (349)
T 4a27_A          211 IVLDCLCG  218 (349)
T ss_dssp             EEEEECC-
T ss_pred             EEEECCCc
Confidence            99999874

>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}

Probab=93.68  E-value=0.37  Score=43.90  Aligned_cols=47  Identities=28%  Similarity=0.406  Sum_probs=38.4

Q ss_pred             eccCCCCCCCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCc
Q 021960           18 AWDDAPPSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVED   65 (305)
Q Consensus        18 ~~~~~~~~~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~   65 (305)
                      .|.........+.||++.|.| .|.||+.+|+.+...|++|+..+++.
T Consensus       143 ~W~~~~~~~~el~gktvGIIG-lG~IG~~vA~~l~~~G~~V~~yd~~~  189 (416)
T 3k5p_A          143 GWEKTAIGSREVRGKTLGIVG-YGNIGSQVGNLAESLGMTVRYYDTSD  189 (416)
T ss_dssp             CCCCCCTTCCCSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECTTC
T ss_pred             cccccCCCCccCCCCEEEEEe-eCHHHHHHHHHHHHCCCEEEEECCcc
Confidence            454443334578999999999 58999999999999999999998764

>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}

Probab=93.67  E-value=0.28  Score=43.50  Aligned_cols=40  Identities=20%  Similarity=0.098  Sum_probs=35.7

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcc
Q 021960           26 HRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDT   66 (305)
Q Consensus        26 ~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~   66 (305)
                      ..++.||++.|.|. |.||+++|+.|...|++|+..+|+..
T Consensus       166 ~~~l~gktiGIIGl-G~IG~~vA~~l~~~G~~V~~~dr~~~  205 (340)
T 4dgs_A          166 GHSPKGKRIGVLGL-GQIGRALASRAEAFGMSVRYWNRSTL  205 (340)
T ss_dssp             CCCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCC
T ss_pred             cccccCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCcc
Confidence            35789999999996 89999999999999999999988754

>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*

Probab=93.59  E-value=0.97  Score=40.55  Aligned_cols=116  Identities=7%  Similarity=-0.042  Sum_probs=62.7

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCC-----eEEEEecCcch----hhhHh-hhcCCC--CeEEEEecCCCHHHHHHHH
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGA-----KVVIADVEDTL----GSVLA-STLAPA--PVTFVHCDVSLEEDIENLI   97 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~-----~vv~~~r~~~~----~~~~~-~~~~~~--~v~~~~~D~~d~~~i~~~~   97 (305)
                      +..+|.|+||+|.||.+++..|+..+.     .+++.+.+...    .+-.. +.....  -..-+.. -++.       
T Consensus        31 ~~~KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~~~~~~~~~G~amDL~h~~~p~~~~v~i-~~~~-------  102 (375)
T 7mdh_A           31 KLVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSI-GIDP-------  102 (375)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEE-ESCH-------
T ss_pred             CCCEEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEecCccchhhhhHHHHHhHHhhhhhhcCCcEE-ecCC-------
Confidence            456899999999999999999998764     16665443221    11111 111111  1111111 1111       


Q ss_pred             HHHHHhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHc--CCCCEEEEeccc
Q 021960           98 NSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMIN--RGGGCIISTASV  170 (305)
Q Consensus        98 ~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~~~iv~isS~  170 (305)
                         .+.+..-|++|..||....       ...+..   ..++.|..-    ++.+.+.+.+  ...+.|+++|-.
T Consensus       103 ---y~~~~daDvVVitag~prk-------pG~tR~---DLl~~N~~I----~k~i~~~i~~~a~p~~ivlVvsNP  160 (375)
T 7mdh_A          103 ---YEVFEDVDWALLIGAKPRG-------PGMERA---ALLDINGQI----FADQGKALNAVASKNVKVLVVGNP  160 (375)
T ss_dssp             ---HHHTTTCSEEEECCCCCCC-------TTCCHH---HHHHHHHHH----HHHHHHHHHHHSCTTCEEEECSSS
T ss_pred             ---HHHhCCCCEEEEcCCCCCC-------CCCCHH---HHHHHHHHH----HHHHHHHHHHhcCCCeEEEEecCc
Confidence               1223468999999886421       112433   345566544    3444444443  356788887754

>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36

Probab=93.53  E-value=0.41  Score=38.75  Aligned_cols=74  Identities=12%  Similarity=0.145  Sum_probs=52.4

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcC---------------CCCeEEEEecCCCHHHHH
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLA---------------PAPVTFVHCDVSLEEDIE   94 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~---------------~~~v~~~~~D~~d~~~i~   94 (305)
                      .+..||..|.+.|.   .+..|+++|++|+.++.++...+...+...               ..++.++.+|+.+...-.
T Consensus        22 ~~~~vLD~GCG~G~---~~~~la~~g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~~   98 (203)
T 1pjz_A           22 PGARVLVPLCGKSQ---DMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARD   98 (203)
T ss_dssp             TTCEEEETTTCCSH---HHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHH
T ss_pred             CCCEEEEeCCCCcH---hHHHHHHCCCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCccc
Confidence            46789999987663   345677889999999999887766654432               346899999998753211


Q ss_pred             HHHHHHHHhcCCccEEEEcCC
Q 021960           95 NLINSTVSRYGRLDILYNNAG  115 (305)
Q Consensus        95 ~~~~~~~~~~g~id~li~nag  115 (305)
                               .+.+|.|+.+..
T Consensus        99 ---------~~~fD~v~~~~~  110 (203)
T 1pjz_A           99 ---------IGHCAAFYDRAA  110 (203)
T ss_dssp             ---------HHSEEEEEEESC
T ss_pred             ---------CCCEEEEEECcc
Confidence                     136899987654

>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A

Probab=93.47  E-value=0.94  Score=39.52  Aligned_cols=141  Identities=17%  Similarity=0.118  Sum_probs=76.2

Q ss_pred             EEEEecCCCchHHHHHHHHHHcC--CeEEEEecCcchhhhHhhhc-CC----CCeEEEEecCCCHHHHHHHHHHHHHhcC
Q 021960           33 VAIITGGARGIGEAAVRLFARHG--AKVVIADVEDTLGSVLASTL-AP----APVTFVHCDVSLEEDIENLINSTVSRYG  105 (305)
Q Consensus        33 ~vlVtGas~giG~~ia~~l~~~g--~~vv~~~r~~~~~~~~~~~~-~~----~~v~~~~~D~~d~~~i~~~~~~~~~~~g  105 (305)
                      ++.|+|+ |.+|.+++..|+..+  ..++++++++.+.+.....+ ..    ..+.+.. |  +.+.           +.
T Consensus         2 KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~-~--~~~a-----------~~   66 (310)
T 2xxj_A            2 KVGIVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVWA-G--SYGD-----------LE   66 (310)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEEE-C--CGGG-----------GT
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEEE-C--CHHH-----------hC
Confidence            6889998 999999999999887  47999998865444322221 11    1222222 2  2221           23


Q ss_pred             CccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEeccccccc--------CCC
Q 021960          106 RLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVM--------GGL  177 (305)
Q Consensus       106 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~--------~~~  177 (305)
                      .-|+||..+|.....       ..+..+   .+..|......+.+.+..+   .+.+.++++|-.....        +.|
T Consensus        67 ~aD~Vii~ag~~~~~-------g~~r~d---l~~~n~~i~~~i~~~i~~~---~p~a~iiv~tNPv~~~t~~~~k~s~~p  133 (310)
T 2xxj_A           67 GARAVVLAAGVAQRP-------GETRLQ---LLDRNAQVFAQVVPRVLEA---APEAVLLVATNPVDVMTQVAYALSGLP  133 (310)
T ss_dssp             TEEEEEECCCCCCCT-------TCCHHH---HHHHHHHHHHHHHHHHHHH---CTTCEEEECSSSHHHHHHHHHHHHTCC
T ss_pred             CCCEEEECCCCCCCC-------CcCHHH---HHHhhHHHHHHHHHHHHHH---CCCcEEEEecCchHHHHHHHHHHcCCC
Confidence            689999999864321       123333   3455554433333333332   4567788776543322        233


Q ss_pred             CCccchh-hHHHHHHHHHHHHHHHC
Q 021960          178 GPHAYTA-SKHAIVGLTKNAACELG  201 (305)
Q Consensus       178 ~~~~Y~~-sKaa~~~~~~~la~e~~  201 (305)
                      ..-..+. +..-...+-..++..+.
T Consensus       134 ~~rviG~gt~LD~~R~~~~la~~lg  158 (310)
T 2xxj_A          134 PGRVVGSGTILDTARFRALLAEYLR  158 (310)
T ss_dssp             GGGEEECTTHHHHHHHHHHHHHHHT
T ss_pred             HHHEEecCcchhHHHHHHHHHHHhC
Confidence            3233344 33223444555566554

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	305
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	6e-76
d2ew8a1	247	c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas	7e-71
d1spxa_	264	c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato	1e-69
d2bgka1	268	c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de	4e-69
d1xkqa_	272	c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh	7e-67
d1ydea1	250	c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase	6e-66
d1zk4a1	251	c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase	6e-65
d1hdca_	254	c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr	6e-63
d1hxha_	253	c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge	1e-62
d1xhla_	274	c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh	8e-62
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	7e-61
d2ae2a_	259	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	2e-60
d1ulsa_	242	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	4e-60
d1xq1a_	259	c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara	6e-60
d2c07a1	251	c.2.1.2 (A:54-304) beta-keto acyl carrier protein	1e-59
d1gz6a_	302	c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do	6e-59
d1cyda_	242	c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul	1e-58
d1iy8a_	258	c.2.1.2 (A:) Levodione reductase {Corynebacterium	2e-58
d1g0oa_	272	c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase	9e-58
d1ae1a_	258	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	5e-57
d1zema1	260	c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba	6e-57
d1bdba_	276	c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy	1e-56
d1fmca_	255	c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase	4e-56
d2ag5a1	245	c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami	6e-56
d1yxma1	297	c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re	1e-55
d1h5qa_	260	c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga	1e-55
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	2e-55
d2gdza1	254	c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog	3e-55
d1ja9a_	259	c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc	1e-54
d1q7ba_	243	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	2e-54
d1nffa_	244	c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob	4e-54
d1vl8a_	251	c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga	4e-54
d2rhca1	257	c.2.1.2 (A:5-261) beta-keto acyl carrier protein r	5e-54
d1w6ua_	294	c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr	7e-54
d1zmta1	252	c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag	2e-53
d2a4ka1	241	c.2.1.2 (A:2-242) beta-keto acyl carrier protein r	4e-52
d1sbya1	254	c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase	5e-52
d1x1ta1	260	c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge	3e-51
d1yb1a_	244	c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase	5e-51
d1k2wa_	256	c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s	6e-50
d1edoa_	244	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	9e-50
d1geea_	261	c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat	1e-49
d1o5ia_	234	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	6e-49
d1uzma1	237	c.2.1.2 (A:9-245) beta-keto acyl carrier protein r	1e-48
d1ulua_	256	c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermoph	9e-48
d1gega_	255	c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl	4e-46
d1mxha_	266	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	1e-45
d1uaya_	241	c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogena	4e-45
d2bd0a1	240	c.2.1.2 (A:2-241) Bacterial sepiapterin reductase	8e-45
d1xu9a_	269	c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase	3e-41
d1qsga_	258	c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli	3e-40
d1oaaa_	259	c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus mus	2e-39
d1jtva_	285	c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi	1e-38
d2o23a1	248	c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydr	2e-38
d1dhra_	236	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	3e-38
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	1e-35
d1fjha_	257	c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase	1e-35
d2pd4a1	274	c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacte	1e-33
d1wmaa1	275	c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox	9e-33
d1e7wa_	284	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	2e-31
d1ooea_	235	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	8e-30
d2h7ma1	268	c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacteri	4e-28
d1uh5a_	329	c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite	5e-25
d1snya_	248	c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly	9e-24
d1d7oa_	297	c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (B	3e-22
d1luaa1	191	c.2.1.7 (A:98-288) Methylene-tetrahydromethanopter	7e-18
d2fr1a1	259	c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI	7e-15
d1jaya_	212	c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase	5e-14
d1t2aa_	347	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H	6e-06
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	1e-05
d1kewa_	361	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	6e-05
d1z45a2	347	c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep	2e-04
d1udca_	338	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	2e-04
d1rkxa_	356	c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia	6e-04
d1orra_	338	c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella	0.001
d1n7ha_	339	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cr	0.002
d2blla1	342	c.2.1.2 (A:316-657) Polymyxin resistance protein A	0.002

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score =  230 bits (588), Expect = 6e-76
 Identities = 82/272 (30%), Positives = 122/272 (44%), Gaps = 26/272 (9%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDV 87
              GK  ++TGGARGIG A  + FAR GA V + D+      V  +        F   D+
Sbjct: 2   LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEAIGG----AFFQVDL 57

Query: 88  SLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMAL 147
             E +    +       GR+D+L NNA +        S +     E+  V+ VN+     
Sbjct: 58  EDERERVRFVEEAAYALGRVDVLVNNAAIAA----PGSALTVRLPEWRRVLEVNLTAPMH 113

Query: 148 GIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRV 207
               AAR M   GGG I++ ASV G+       AY ASK  +V LT++ A +L    IRV
Sbjct: 114 LSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAPLRIRV 173

Query: 208 NCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRS 267
           N ++P  +AT  ++ A   S D E                                  + 
Sbjct: 174 NAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHAL------------------RRLGKP 215

Query: 268 KDIAEAALYLASDESRYVSGHNLVVDGGVTTS 299
           +++AEA L+LAS+++ +++G  L VDGG+T S
Sbjct: 216 EEVAEAVLFLASEKASFITGAILPVDGGMTAS 247

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

 Score =  217 bits (554), Expect = 7e-71
 Identities = 81/270 (30%), Positives = 118/270 (43%), Gaps = 26/270 (9%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDV 87
           RL+ K+A+ITGGA GIG A    FA  GA + IAD+     +  A       V  V CDV
Sbjct: 2   RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDV 61

Query: 88  SLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMAL 147
           S   D+E      +S +GR DIL NNAG+           +   +++     +NV    L
Sbjct: 62  SQPGDVEAFGKQVISTFGRCDILVNNAGIY----PLIPFDELTFEQWKKTFEINVDSGFL 117

Query: 148 GIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRV 207
             K     M   G G II+  S    +       Y ++K A +G T+  A +LG+ GI V
Sbjct: 118 MAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDLGKDGITV 177

Query: 208 NCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRS 267
           N I+P  V T+        S      D               +   +  +  L+      
Sbjct: 178 NAIAPSLVRTAT----TEASALSAMFDV--------------LPNMLQAIPRLQ----VP 215

Query: 268 KDIAEAALYLASDESRYVSGHNLVVDGGVT 297
            D+  AA +LASD++ +++G  L VDGG+ 
Sbjct: 216 LDLTGAAAFLASDDASFITGQTLAVDGGMV 245

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score =  215 bits (548), Expect = 1e-69
 Identities = 87/276 (31%), Positives = 136/276 (49%), Gaps = 21/276 (7%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIAD-----VEDTLGSVLASTLAPAPVTF 82
           R   KVAIITG + GIG A   LFAR GAKV I       +E+T   +LA+ ++   V  
Sbjct: 2   RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNS 61

Query: 83  VHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNV 142
           V  DV+ +   + ++++T+ ++G+LDIL NNAG      + K+      + +D  + +N+
Sbjct: 62  VVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNL 121

Query: 143 KGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGR 202
           + +    K A   + +  G  +  ++  +G+        Y+ +K AI   T+N A +L +
Sbjct: 122 RSVIALTKKAVPHLSSTKGEIVNISSIASGLHATPDFPYYSIAKAAIDQYTRNTAIDLIQ 181

Query: 203 YGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKG 262
           +GIRVN ISP  VAT          G  EE  +     + + KE               G
Sbjct: 182 HGIRVNSISPGLVATGF----GSAMGMPEETSKKFYSTMATMKECVPA-----------G 226

Query: 263 TTLRSKDIAEAALYLASDE-SRYVSGHNLVVDGGVT 297
              + +DIAE   +LA  + S Y+ GH LVVDGG +
Sbjct: 227 VMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGSS 262

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

 Score =  213 bits (544), Expect = 4e-69
 Identities = 124/274 (45%), Positives = 173/274 (63%), Gaps = 23/274 (8%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADV-EDTLGSVLASTLAPAPVTFVHCD 86
           RL+ KVAIITGGA GIGE   +LF R+GAKVVIAD+ +D    V  +  +P  ++FVHCD
Sbjct: 3   RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCD 62

Query: 87  VSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMA 146
           V+ +ED+ NL+++T++++G+LDI++ N GV        SI++   ++F  VM +NV G  
Sbjct: 63  VTKDEDVRNLVDTTIAKHGKLDIMFGNVGV--LSTTPYSILEAGNEDFKRVMDINVYGAF 120

Query: 147 LGIKHAARVMINRGGGCIISTASVAGVMGGLGPHA-YTASKHAIVGLTKNAACELGRYGI 205
           L  KHAARVMI    G I+ TAS++    G G    YTA+KHA++GLT +   ELG YGI
Sbjct: 121 LVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLCTELGEYGI 180

Query: 206 RVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL 265
           RVNC+SP+ VA+ +L + +                        ++EE      NLKGT L
Sbjct: 181 RVNCVSPYIVASPLLTDVFGVDSS-------------------RVEELAHQAANLKGTLL 221

Query: 266 RSKDIAEAALYLASDESRYVSGHNLVVDGGVTTS 299
           R++D+A+A  YLA DES+YVSG NLV+DGG T +
Sbjct: 222 RAEDVADAVAYLAGDESKYVSGLNLVIDGGYTRT 255

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  208 bits (530), Expect = 7e-67
 Identities = 76/276 (27%), Positives = 126/276 (45%), Gaps = 21/276 (7%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIAD-----VEDTLGSVLASTLAPAPVTF 82
           R   K  IITG + GIG     LFA+ GA V I       +E+T   +L S ++   V  
Sbjct: 2   RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNS 61

Query: 83  VHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNV 142
           V  DV+ E+  + +INST+ ++G++D+L NNAG         +  D   D +   +++N+
Sbjct: 62  VVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNL 121

Query: 143 KGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGR 202
           + +    K     ++   G  +  ++ VAG         Y  +K A+   T++ A +L +
Sbjct: 122 QAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTRSTAIDLAK 181

Query: 203 YGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKG 262
           +GIRVN +SP  V T          G  ++  +     + S KE   +           G
Sbjct: 182 FGIRVNSVSPGMVETGF----TNAMGMPDQASQKFYNFMASHKECIPI-----------G 226

Query: 263 TTLRSKDIAEAALYLASDE-SRYVSGHNLVVDGGVT 297
              + + IA   L+LA    S Y+ G ++V DGG +
Sbjct: 227 AAGKPEHIANIILFLADRNLSFYILGQSIVADGGTS 262

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  205 bits (522), Expect = 6e-66
 Identities = 82/270 (30%), Positives = 129/270 (47%), Gaps = 25/270 (9%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDV 87
           R  GKV ++TGG RGIG   VR F   GA+VVI D +++ G  L   L  A   F+ CDV
Sbjct: 3   RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGA--VFILCDV 60

Query: 88  SLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMAL 147
           + E+D++ L++ T+ R+GRLD + NNAG   +    +   +  A  F  ++ +N+ G   
Sbjct: 61  TQEDDVKTLVSETIRRFGRLDCVVNNAG---HHPPPQRPEETSAQGFRQLLELNLLGTYT 117

Query: 148 GIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRV 207
             K A   +  +  G +I+ +S+ G +G      Y A+K A+  +TK  A +   YG+RV
Sbjct: 118 LTKLALPYLR-KSQGNVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALDESPYGVRV 176

Query: 208 NCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRS 267
           NCISP  + T +         D            P                   G   + 
Sbjct: 177 NCISPGNIWTPLWEELAALMPDPRASIREGMLAQPL------------------GRMGQP 218

Query: 268 KDIAEAALYLASDESRYVSGHNLVVDGGVT 297
            ++  AA++LAS+ + + +G  L+V GG  
Sbjct: 219 AEVGAAAVFLASE-ANFCTGIELLVTGGAE 247

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

 Score =  202 bits (515), Expect = 6e-65
 Identities = 90/274 (32%), Positives = 129/274 (47%), Gaps = 31/274 (11%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADV-EDTLGSVLASTLAPAPVTFVHCD 86
           RL+GKVAIITGG  GIG A    F   GAKV+I     D       S   P  + F   D
Sbjct: 3   RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHD 62

Query: 87  VSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMA 146
            S E+    L ++T   +G +  L NNAG+      +KS+ +    E+  ++ VN+ G+ 
Sbjct: 63  SSDEDGWTKLFDATEKAFGPVSTLVNNAGI----AVNKSVEETTTAEWRKLLAVNLDGVF 118

Query: 147 LGIKHAARVMINRG-GGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAA--CELGRY 203
            G +   + M N+G G  II+ +S+ G +G     AY ASK A+  ++K+AA  C L  Y
Sbjct: 119 FGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDY 178

Query: 204 GIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGT 263
            +RVN + P  + T ++ +       G EE        P                   G 
Sbjct: 179 DVRVNTVHPGYIKTPLVDDLP-----GAEEAMSQRTKTPM------------------GH 215

Query: 264 TLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
                DIA   +YLAS+ES++ +G   VVDGG T
Sbjct: 216 IGEPNDIAYICVYLASNESKFATGSEFVVDGGYT 249

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

 Score =  197 bits (502), Expect = 6e-63
 Identities = 94/270 (34%), Positives = 129/270 (47%), Gaps = 28/270 (10%)

Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVS 88
           L GK  IITGGARG+G  A R     GA+VV+ADV D  G+  A  L  A   + H DV+
Sbjct: 3   LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDA-ARYQHLDVT 61

Query: 89  LEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALG 148
           +EED + ++      +G +D L NNAG          +     + F  V+ +N+ G+ +G
Sbjct: 62  IEEDWQRVVAYAREEFGSVDGLVNNAG----ISTGMFLETESVERFRKVVEINLTGVFIG 117

Query: 149 IKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVN 208
           +K     M + GGG I++ +S AG+MG     +Y ASK  + GL+K AA ELG   IRVN
Sbjct: 118 MKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIRVN 177

Query: 209 CISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSK 268
            + P    T M          G  + E      P  +   +                   
Sbjct: 178 SVHPGMTYTPMTAET------GIRQGEGNYPNTPMGRVGNEPG----------------- 214

Query: 269 DIAEAALYLASDESRYVSGHNLVVDGGVTT 298
           +IA A + L SD S YV+G  L VDGG TT
Sbjct: 215 EIAGAVVKLLSDTSSYVTGAELAVDGGWTT 244

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score =  196 bits (500), Expect = 1e-62
 Identities = 86/272 (31%), Positives = 127/272 (46%), Gaps = 27/272 (9%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDV 87
           RL+GKVA++TGGA G+G   V+L    GAKV  +D+ +  G  LA+ L      FV  DV
Sbjct: 3   RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL-GERSMFVRHDV 61

Query: 88  SLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMAL 147
           S E D   ++ +   R G L++L NNAG+L        +     ++F  ++++N + + +
Sbjct: 62  SSEADWTLVMAAVQRRLGTLNVLVNNAGIL----LPGDMETGRLEDFSRLLKINTESVFI 117

Query: 148 GIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGR--YGI 205
           G +     M    GG II+ ASV+  +       Y+ASK A+  LT+ AA    +  Y I
Sbjct: 118 GCQQGIAAMK-ETGGSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCRKQGYAI 176

Query: 206 RVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL 265
           RVN I P G+ T M     + S       E +                     N  G   
Sbjct: 177 RVNSIHPDGIYTPM----MQASLPKGVSKEMVLHDPKL---------------NRAGRAY 217

Query: 266 RSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
             + IA+  L+LASDES  +SG  L  D  + 
Sbjct: 218 MPERIAQLVLFLASDESSVMSGSELHADNSIL 249

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  195 bits (496), Expect = 8e-62
 Identities = 77/276 (27%), Positives = 132/276 (47%), Gaps = 23/276 (8%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIAD-----VEDTLGSVLASTLAPAPVTF 82
           R  GK  IITG + GIG +A  +FA+ GA+V I       +E+T   +L + +    +  
Sbjct: 1   RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINA 60

Query: 83  VHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNV 142
           V  DV+     +++IN+T++++G++DIL NNAG   N     +  D   + +    ++N 
Sbjct: 61  VVADVTEASGQDDIINTTLAKFGKIDILVNNAGA--NLADGTANTDQPVELYQKTFKLNF 118

Query: 143 KGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGR 202
           + +    +     +I   G  +  ++ VAG     G   Y  +K A+   T+  A +L +
Sbjct: 119 QAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTAIDLIQ 178

Query: 203 YGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKG 262
           +G+RVN +SP  VAT          G  E   + +   I S+KE   +           G
Sbjct: 179 HGVRVNSVSPGAVATGF----MGAMGLPETASDKLYSFIGSRKECIPV-----------G 223

Query: 263 TTLRSKDIAEAALYLAS-DESRYVSGHNLVVDGGVT 297
              + ++IA   ++LA  + S Y+ G ++V DGG T
Sbjct: 224 HCGKPEEIANIIVFLADRNLSSYIIGQSIVADGGST 259

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  192 bits (489), Expect = 7e-61
 Identities = 71/284 (25%), Positives = 122/284 (42%), Gaps = 38/284 (13%)

Query: 22  APPSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVE----DTLGSVLASTLAP 77
           A P   R   ++A++TG + GIG A  R   + G KVV         + L +   S   P
Sbjct: 1   ARPGMERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYP 60

Query: 78  APVTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNV 137
             +    CD+S EEDI ++ ++  S++  +DI  NNAG+     +  +++      + ++
Sbjct: 61  GTLIPYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLA----RPDTLLSGSTSGWKDM 116

Query: 138 MRVNVKGMALGIKHAARVMINRG--GGCIISTASVAG--VMGGLGPHAYTASKHAIVGLT 193
             VNV  +++  + A + M  R    G II+  S++G  V+     H Y+A+K+A+  LT
Sbjct: 117 FNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALT 176

Query: 194 KNAACEL--GRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKME 251
           +    EL   +  IR  CISP  V T             +++ E                
Sbjct: 177 EGLRQELREAQTHIRATCISPGVVETQFAFKLH------DKDPEKAAATYE--------- 221

Query: 252 EFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
                    +   L+ +D+AEA +Y+ S  +    G   +   G
Sbjct: 222 ---------QMKCLKPEDVAEAVIYVLSTPAHIQIGDIQMRPTG 256

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

 Score =  190 bits (485), Expect = 2e-60
 Identities = 66/272 (24%), Positives = 117/272 (43%), Gaps = 26/272 (9%)

Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL--APAPVTFVHCD 86
           LEG  A++TGG+RGIG   V   A  GA V          +   +        V    CD
Sbjct: 6   LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCD 65

Query: 87  VSLEEDIENLINSTVSRY-GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGM 145
           +S   + + L+N+  + + G+L+IL NNAG++     +K   D+  +++  +M +N +  
Sbjct: 66  LSSRSERQELMNTVANHFHGKLNILVNNAGIVI----YKEAKDYTVEDYSLIMSINFEAA 121

Query: 146 ALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGI 205
                 A   +     G ++  +SV+G +       Y A+K A+  LT+  A E  +  I
Sbjct: 122 YHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNI 181

Query: 206 RVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL 265
           RVN + P  +ATS++    ++    E  ++ ++                           
Sbjct: 182 RVNGVGPGVIATSLVEMTIQDPEQKENLNKLID-RCAL------------------RRMG 222

Query: 266 RSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
             K++A    +L    + YV+G  + VDGG+ 
Sbjct: 223 EPKELAAMVAFLCFPAASYVTGQIIYVDGGLM 254

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

 Score =  189 bits (482), Expect = 4e-60
 Identities = 87/270 (32%), Positives = 127/270 (47%), Gaps = 32/270 (11%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDV 87
           RL+ K  +ITG A GIG A + LFA+ GA++V  D+E+     L           V  DV
Sbjct: 2   RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEE---GPLREAAEAVGAHPVVMDV 58

Query: 88  SLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMAL 147
           +    +E      ++  GRLD + + AG      +         ++++ V+RVN+ G  L
Sbjct: 59  ADPASVERGFAEALAHLGRLDGVVHYAG----ITRDNFHWKMPLEDWELVLRVNLTGSFL 114

Query: 148 GIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRV 207
             K A+  M  +  G I+ TAS    +G LG   Y AS   +VGLT+  A ELGR+GIRV
Sbjct: 115 VAKAASEAMREKNPGSIVLTASRVY-LGNLGQANYAASMAGVVGLTRTLALELGRWGIRV 173

Query: 208 NCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRS 267
           N ++P  + T M       +   E+  E      P                   G   + 
Sbjct: 174 NTLAPGFIETRM------TAKVPEKVREKAIAATPL------------------GRAGKP 209

Query: 268 KDIAEAALYLASDESRYVSGHNLVVDGGVT 297
            ++A AAL+L SDES +++G  L VDGG T
Sbjct: 210 LEVAYAALFLLSDESSFITGQVLFVDGGRT 239

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  189 bits (482), Expect = 6e-60
 Identities = 73/272 (26%), Positives = 121/272 (44%), Gaps = 30/272 (11%)

Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAP--VTFVHCD 86
           L+ K  ++TGG +GIG A V  FA  GA +      +   +   S        VT   CD
Sbjct: 6   LKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCD 65

Query: 87  VSLEEDIENLINSTVSRY-GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGM 145
            SL  + E L+ +  S + G+LDIL NN G +      K  +D+ A++F   +  N++  
Sbjct: 66  ASLRPEREKLMQTVSSMFGGKLDILINNLGAIR----SKPTLDYTAEDFSFHISTNLESA 121

Query: 146 ALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGI 205
               + A  ++   G G II  +S+AGV+       Y+A+K A+  L +N ACE    GI
Sbjct: 122 YHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWASDGI 181

Query: 206 RVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL 265
           R N ++P  +AT +    +      +E  + +    P                   G   
Sbjct: 182 RANAVAPAVIATPLAEAVYD-----DEFKKVVISRKPL------------------GRFG 218

Query: 266 RSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
             ++++    +L    + Y++G  + VDGG+T
Sbjct: 219 EPEEVSSLVAFLCMPAASYITGQTICVDGGLT 250

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score =  189 bits (480), Expect = 1e-59
 Identities = 70/272 (25%), Positives = 127/272 (46%), Gaps = 30/272 (11%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL--APAPVTFVHC 85
             E KVA++TG  RGIG    ++ A+  + V+           +   +       +    
Sbjct: 7   CGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAG 66

Query: 86  DVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGM 145
           DVS +E+I  +IN  ++ +  +DIL NN        +    +    DE+++V+R N+  +
Sbjct: 67  DVSKKEEISEVINKILTEHKNVDILVNN----AGITRDNLFLRMKNDEWEDVLRTNLNSL 122

Query: 146 ALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGI 205
               +  ++ MIN   G II+ +S+ G+ G +G   Y++SK  ++G TK+ A EL    I
Sbjct: 123 FYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGVIGFTKSLAKELASRNI 182

Query: 206 RVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL 265
            VN I+P  +++ M           E+  + +   IP+                  G   
Sbjct: 183 TVNAIAPGFISSDMTDKIS------EQIKKNIISNIPA------------------GRMG 218

Query: 266 RSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
             +++A  A +L+SD+S Y++G   V+DGG++
Sbjct: 219 TPEEVANLACFLSSDKSGYINGRVFVIDGGLS 250

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  188 bits (479), Expect = 6e-59
 Identities = 63/278 (22%), Positives = 110/278 (39%), Gaps = 47/278 (16%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLA--------PAP 79
           R +G+V ++TG   G+G A    FA  GA VV+ D+      V   + A           
Sbjct: 4   RFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRR 63

Query: 80  VTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMR 139
                 +    E  E L+ + +  +GR+D++ NNAG+L      +S      +++D + R
Sbjct: 64  GGKAVANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILR----DRSFSRISDEDWDIIQR 119

Query: 140 VNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACE 199
           V+++G     + A   M  +  G II TAS +G+ G  G   Y+A+K  ++GL      E
Sbjct: 120 VHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQANYSAAKLGLLGLANTLVIE 179

Query: 200 LGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGN 259
             +  I  N I+P    + M                     +P  +++ +          
Sbjct: 180 GRKNNIHCNTIAP-NAGSRM-----------------TETVMP--EDLVEA--------- 210

Query: 260 LKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
                L+ + +A   L+L  +     +G    V  G  
Sbjct: 211 -----LKPEYVAPLVLWLCHESC-EENGGLFEVGAGWI 242

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  186 bits (473), Expect = 1e-58
 Identities = 70/273 (25%), Positives = 112/273 (41%), Gaps = 33/273 (12%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDV 87
              G  A++TG  +GIG   V+     GAKVV     ++    LA       +  V  D+
Sbjct: 2   NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPG--IEPVCVDL 59

Query: 88  SLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMAL 147
              +  E      +   G +D+L NNA ++      +  ++   + FD    VN++ +  
Sbjct: 60  GDWDATEK----ALGGIGPVDLLVNNAALVI----MQPFLEVTKEAFDRSFSVNLRSVFQ 111

Query: 148 GIKHAARVMINRGG-GCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIR 206
             +  AR MINRG  G I++ +S+   +       Y+++K A+  LTK  A ELG + IR
Sbjct: 112 VSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHKIR 171

Query: 207 VNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLR 266
           VN ++P  V T M     +      E    +    P                        
Sbjct: 172 VNSVNPTVVLTDM----GKKVSADPEFARKLKERHPL------------------RKFAE 209

Query: 267 SKDIAEAALYLASDESRYVSGHNLVVDGGVTTS 299
            +D+  + L+L SD S   SG  ++VD G   S
Sbjct: 210 VEDVVNSILFLLSDRSASTSGGGILVDAGYLAS 242

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

 Score =  186 bits (473), Expect = 2e-58
 Identities = 89/276 (32%), Positives = 140/276 (50%), Gaps = 23/276 (8%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADV----EDTLGSVLASTLAPAPVTFV 83
           R   +V +ITGG  G+G A     A  GAK+ + DV     +   + +  T   A V   
Sbjct: 1   RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTT 60

Query: 84  HCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVK 143
             DVS E  +E  + +T  R+GR+D  +NNAG    + K      F A EFD V+ +N++
Sbjct: 61  VADVSDEAQVEAYVTATTERFGRIDGFFNNAG---IEGKQNPTESFTAAEFDKVVSINLR 117

Query: 144 GMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRY 203
           G+ LG++   ++M  +G G +++TASV G+ G      Y A+KH +VGLT+N+A E GRY
Sbjct: 118 GVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRY 177

Query: 204 GIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGT 263
           GIR+N I+P  + T M+ N+ +                      +  EEF+    N    
Sbjct: 178 GIRINAIAPGAIWTPMVENSMKQLDPENPR--------------KAAEEFIQ--VNPSKR 221

Query: 264 TLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTS 299
              + +IA    +L SD++ YV+   + +DGG + +
Sbjct: 222 YGEAPEIAAVVAFLLSDDASYVNATVVPIDGGQSAA 257

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score =  184 bits (469), Expect = 9e-58
 Identities = 69/278 (24%), Positives = 117/278 (42%), Gaps = 21/278 (7%)

Query: 24  PSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADV--EDTLGSVLAS-TLAPAPV 80
           P    LEGKVA++TG  RGIG        R G KV++      ++   V+A+     +  
Sbjct: 11  PQSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDA 70

Query: 81  TFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRV 140
             V  +V + EDI  +    V  +G+LDI+ +N+G          + D   +EFD V  +
Sbjct: 71  ACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSG----VVSFGHVKDVTPEEFDRVFTI 126

Query: 141 NVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAY-TASKHAIVGLTKNAACE 199
           N +G     + A + +   G   ++ +  + G    +  HA  + SK AI    +  A +
Sbjct: 127 NTRGQFFVAREAYKHLEIGGRLILMGS--ITGQAKAVPKHAVYSGSKGAIETFARCMAID 184

Query: 200 LGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGN 259
           +    I VN ++P G+ T M             E       + +++         S L  
Sbjct: 185 MADKKITVNVVAPGGIKTDMYHAVC-------REYIPNGENLSNEEVDEYAAVQWSPLRR 237

Query: 260 LKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
           +        DIA    +LAS++  +V+G  + +DGG  
Sbjct: 238 V----GLPIDIARVVCFLASNDGGWVTGKVIGIDGGAC 271

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

 Score =  182 bits (463), Expect = 5e-57
 Identities = 67/272 (24%), Positives = 116/272 (42%), Gaps = 25/272 (9%)

Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL--APAPVTFVHCD 86
           L+G  A++TGG++GIG A V   A  GA+V      +                V    CD
Sbjct: 4   LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCD 63

Query: 87  VSLEEDIENLINSTVSRY-GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGM 145
           +    + + L+ +    + G+L+IL NNA        HK   DF   +++ +M  N +  
Sbjct: 64  LLSRTERDKLMQTVAHVFDGKLNILVNNA----GVVIHKEAKDFTEKDYNIIMGTNFEAA 119

Query: 146 ALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGI 205
               + A  ++     G +I  +S+AG         Y+ASK AI  +TK+ ACE  +  I
Sbjct: 120 YHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWAKDNI 179

Query: 206 RVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL 265
           RVN ++P  + T ++  A + +   +EE +      P                   G   
Sbjct: 180 RVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPM------------------GRAG 221

Query: 266 RSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
           + ++++    +L    + Y++G  +  DGG T
Sbjct: 222 KPQEVSALIAFLCFPAASYITGQIIWADGGFT 253

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

 Score =  182 bits (462), Expect = 6e-57
 Identities = 78/271 (28%), Positives = 126/271 (46%), Gaps = 13/271 (4%)

Query: 27  RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL--APAPVTFVH 84
           ++  GKV ++TG    IG A     A  G  + + D+         +++           
Sbjct: 1   KKFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYV 60

Query: 85  CDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKG 144
           CDV+ EE +   ++S V  +G++D L+NNAG    Q     + D+ +D+F  V+ +NV G
Sbjct: 61  CDVTSEEAVIGTVDSVVRDFGKIDFLFNNAG---YQGAFAPVQDYPSDDFARVLTINVTG 117

Query: 145 MALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYG 204
               +K  +R MI +  G I++TAS+AGV G     AY  SK AI+ LT+ AA +L  Y 
Sbjct: 118 AFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALDLAPYN 177

Query: 205 IRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT 264
           IRVN ISP  +    +   W    + + +     F    +   ++M   V          
Sbjct: 178 IRVNAISPGYMGPGFM---WERQVELQAKVGSQYFSTDPKVVAQQMIGSVP-----MRRY 229

Query: 265 LRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
               +I     +L  D+S +++G NL + GG
Sbjct: 230 GDINEIPGVVAFLLGDDSSFMTGVNLPIAGG 260

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

 Score =  182 bits (462), Expect = 1e-56
 Identities = 76/272 (27%), Positives = 120/272 (44%), Gaps = 19/272 (6%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDV 87
           +L+G+  +ITGGA G+G A V  F   GAKV + D      + L +      V  +  DV
Sbjct: 2   KLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDH-GDNVLGIVGDV 60

Query: 88  SLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDAD-EFDNVMRVNVKGMA 146
              ED +   +  V+R+G++D L  NAG+         + +   D  FD V  +NVKG  
Sbjct: 61  RSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYI 120

Query: 147 LGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIR 206
             +K     ++   G  +I T S AG     G   YTA+KHAIVGL +  A EL  Y +R
Sbjct: 121 HAVKACLPALVASRGN-VIFTISNAGFYPNGGGPLYTAAKHAIVGLVRELAFELAPY-VR 178

Query: 207 VNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLR 266
           VN +   G+ + +   +    G        +   + S   + +M E              
Sbjct: 179 VNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPIGRMPE-------------- 224

Query: 267 SKDIAEAALYLAS-DESRYVSGHNLVVDGGVT 297
            ++   A ++ A+  ++   +G  L  DGG+ 
Sbjct: 225 VEEYTGAYVFFATRGDAAPATGALLNYDGGLG 256

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score =  180 bits (457), Expect = 4e-56
 Identities = 81/276 (29%), Positives = 120/276 (43%), Gaps = 30/276 (10%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL--APAPVTFVHC 85
           RL+GK AIITG   GIG+     FA  GA VV++D+     + +   +           C
Sbjct: 8   RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRC 67

Query: 86  DVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGM 145
           D++ E+++  L +  +S+ G++DIL NNAG  G         D    +F     +NV   
Sbjct: 68  DITSEQELSALADFAISKLGKVDILVNNAGGGGP-----KPFDMPMADFRRAYELNVFSF 122

Query: 146 ALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGI 205
               +  A  M   GGG I++  S+A     +   +Y +SK A   L +N A +LG   I
Sbjct: 123 FHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEKNI 182

Query: 206 RVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL 265
           RVN I+P  + T  L +         E ++ M    P                       
Sbjct: 183 RVNGIAPGAILTDALKSVI-----TPEIEQKMLQHTPI------------------RRLG 219

Query: 266 RSKDIAEAALYLASDESRYVSGHNLVVDGGVTTSRN 301
           + +DIA AAL+L S  + +VSG  L V GG     N
Sbjct: 220 QPQDIANAALFLCSPAASWVSGQILTVSGGGVQELN 255

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  179 bits (455), Expect = 6e-56
 Identities = 84/271 (30%), Positives = 133/271 (49%), Gaps = 30/271 (11%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDV 87
           RL+GKV I+T  A+GIG+AA   FAR GAKV+  D+ ++    L                
Sbjct: 3   RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTK- 61

Query: 88  SLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMAL 147
                 +  I+   +   RLD+L+N AG +     H +++D +  ++D  M +NV+ M L
Sbjct: 62  ------KKQIDQFANEVERLDVLFNVAGFVH----HGTVLDCEEKDWDFSMNLNVRSMYL 111

Query: 148 GIKHAARVMINRGGGCIISTASVAGVMGGLGPH-AYTASKHAIVGLTKNAACELGRYGIR 206
            IK     M+ +  G II+ +SVA  + G+     Y+ +K A++GLTK+ A +  + GIR
Sbjct: 112 MIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIR 171

Query: 207 VNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLR 266
            NC+ P  V T  L    +  G+ EE          +                  G    
Sbjct: 172 CNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKT------------------GRFAT 213

Query: 267 SKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
           +++IA   +YLASDES YV+G+ +++DGG +
Sbjct: 214 AEEIAMLCVYLASDESAYVTGNPVIIDGGWS 244

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  180 bits (457), Expect = 1e-55
 Identities = 69/277 (24%), Positives = 119/277 (42%), Gaps = 32/277 (11%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADV-EDTLGSVLASTLAPAP------V 80
            L+G+VAI+TGGA GIG+A V+     G+ VVIA    + L S      A  P      V
Sbjct: 9   LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARV 68

Query: 81  TFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRV 140
             + C++  EE++ NL+ ST+  +G+++ L NN G     +         +  +  V+  
Sbjct: 69  IPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGG----GQFLSPAEHISSKGWHAVLET 124

Query: 141 NVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACEL 200
           N+ G     K      +   GG I++   V    G        A++  +  LTK+ A E 
Sbjct: 125 NLTGTFYMCKAVYSSWMKEHGGSIVNI-IVPTKAGFPLAVHSGAARAGVYNLTKSLALEW 183

Query: 201 GRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNL 260
              GIR+NC++P  + +   V  +     G+   E     IP+                 
Sbjct: 184 ACSGIRINCVAPGVIYSQTAVENY--GSWGQSFFEGSFQKIPA----------------- 224

Query: 261 KGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
                  ++++    +L S  + +++G ++ VDGG +
Sbjct: 225 -KRIGVPEEVSSVVCFLLSPAASFITGQSVDVDGGRS 260

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

 Score =  179 bits (454), Expect = 1e-55
 Identities = 65/282 (23%), Positives = 99/282 (35%), Gaps = 41/282 (14%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLA---PAPVTFVH 84
               K  I+TGG RGIG A  R  A  GA V +          +   +            
Sbjct: 6   SFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQ 65

Query: 85  CDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKG 144
           CDVS  + +   I    +  G +  L  NA         K   +   ++F  V  VNV G
Sbjct: 66  CDVSNTDIVTKTIQQIDADLGPISGLIANA----GVSVVKPATELTHEDFAFVYDVNVFG 121

Query: 145 MALGIKHAARVMINRGGGCII--------STASVAGVMGGLGPHAYTASKHAIVGLTKNA 196
           +    +  A++ + +     I           + + + G L    Y +SK A   L K  
Sbjct: 122 VFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGL 181

Query: 197 ACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMN-FGIPSQKEVRKMEEFVS 255
           A E    GIRVN +SP  V T    +  +   D +  +  +N F  P             
Sbjct: 182 AAEWASAGIRVNALSPGYVNTDQTAHMDKKIRDHQASNIPLNRFAQPE------------ 229

Query: 256 GLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
                        ++   A+ L SD + Y++G    +DGG  
Sbjct: 230 -------------EMTGQAILLLSDHATYMTGGEYFIDGGQL 258

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  178 bits (452), Expect = 2e-55
 Identities = 68/271 (25%), Positives = 106/271 (39%), Gaps = 33/271 (12%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDV 87
            L G+  ++TG  +GIG   V+     GA+VV           L        +  V  D+
Sbjct: 4   FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPG--IEPVCVDL 61

Query: 88  SLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMAL 147
              E  E  +       G +D+L NNA         +  ++   + FD    VN++ +  
Sbjct: 62  GDWEATERALG----SVGPVDLLVNNAA----VALLQPFLEVTKEAFDRSFEVNLRAVIQ 113

Query: 148 GIKHAARVMINRGGGC-IISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIR 206
             +  AR +I RG    I++ +S            Y ++K A+  LTK  A ELG + IR
Sbjct: 114 VSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIR 173

Query: 207 VNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLR 266
           VN ++P  V TSM     + +     + + M   IP                   G    
Sbjct: 174 VNAVNPTVVMTSM----GQATWSDPHKAKTMLNRIPL------------------GKFAE 211

Query: 267 SKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
            + +  A L+L SD S   +G  L V+GG  
Sbjct: 212 VEHVVNAILFLLSDRSGMTTGSTLPVEGGFW 242

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  177 bits (451), Expect = 3e-55
 Identities = 76/275 (27%), Positives = 120/275 (43%), Gaps = 39/275 (14%)

Query: 30  EGKVAIITGGARGIGEAAVRLFARHGAKVVIADV----EDTLGSVLASTLAPAPVTFVHC 85
            GKVA++TG A+GIG A        GAKV + D          + L     P    F+ C
Sbjct: 2   NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQC 61

Query: 86  DVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGM 145
           DV+ ++ + +     V  +GRLDIL NNAGV             +   ++  +++N+  +
Sbjct: 62  DVADQQQLRDTFRKVVDHFGRLDILVNNAGV------------NNEKNWEKTLQINLVSV 109

Query: 146 ALGIKHAARVMI---NRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNA--ACEL 200
             G       M       GG II+ +S+AG+M       Y ASKH IVG T++A  A  L
Sbjct: 110 ISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAANL 169

Query: 201 GRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNL 260
              G+R+N I P  V T++L        +  E++E M   I  +  ++ M ++       
Sbjct: 170 MNSGVRLNAICPGFVNTAIL--------ESIEKEENMGQYIEYKDHIKDMIKY------- 214

Query: 261 KGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
               L    IA   + L  D+   ++G  + +   
Sbjct: 215 -YGILDPPLIANGLITLIEDD--ALNGAIMKITTS 246

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score =  176 bits (448), Expect = 1e-54
 Identities = 75/273 (27%), Positives = 119/273 (43%), Gaps = 21/273 (7%)

Query: 27  RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADV--EDTLGSVLAS-TLAPAPVTFV 83
           + L GKVA+ TG  RGIG        R GA VV+           V+A      A    +
Sbjct: 2   KPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAI 61

Query: 84  HCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVK 143
             D+S   ++  L +  VS +G LD + +N+G+          ++   + FD V  +N +
Sbjct: 62  QADISKPSEVVALFDKAVSHFGGLDFVMSNSGME----VWCDELEVTQELFDKVFNLNTR 117

Query: 144 GMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTA-SKHAIVGLTKNAACELGR 202
           G     +   +    R GG II T+S+A VM G+  HA  A SK A+ G  +  A + G 
Sbjct: 118 GQFFVAQQGLKHC--RRGGRIILTSSIAAVMTGIPNHALYAGSKAAVEGFCRAFAVDCGA 175

Query: 203 YGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKG 262
            G+ VNCI+P GV T M      +            +    Q+++ +    ++ L  +  
Sbjct: 176 KGVTVNCIAPGGVKTDMFDENSWHYAP-------GGYKGMPQEKIDEGLANMNPLKRI-- 226

Query: 263 TTLRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
                 DI  A   L  +ES +++G  + + GG
Sbjct: 227 --GYPADIGRAVSALCQEESEWINGQVIKLTGG 257

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

 Score =  175 bits (444), Expect = 2e-54
 Identities = 72/270 (26%), Positives = 120/270 (44%), Gaps = 31/270 (11%)

Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVS 88
            EGK+A++TG +RGIG A     A  GAKV+     +     ++  L  A    +  +V+
Sbjct: 2   FEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYL-GANGKGLMLNVT 60

Query: 89  LEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALG 148
               IE+++    + +G +DIL NNA       +   ++    +E+++++  N+  +   
Sbjct: 61  DPASIESVLEKIRAEFGEVDILVNNA----GITRDNLLMRMKDEEWNDIIETNLSSVFRL 116

Query: 149 IKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVN 208
            K   R M+ +  G II+  SV G MG  G   Y A+K  ++G +K+ A E+   GI VN
Sbjct: 117 SKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVASRGITVN 176

Query: 209 CISPFGVATSMLVNAWRNSGDGEEEDECMN-FGIPSQKEVRKMEEFVSGLGNLKGTTLRS 267
            ++P  + T M      +   G          G                           
Sbjct: 177 VVAPGFIETDMTRALSDDQRAGILAQVPAGRLGGAQ------------------------ 212

Query: 268 KDIAEAALYLASDESRYVSGHNLVVDGGVT 297
            +IA A  +LASDE+ Y++G  L V+GG+ 
Sbjct: 213 -EIANAVAFLASDEAAYITGETLHVNGGMY 241

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  174 bits (443), Expect = 4e-54
 Identities = 98/270 (36%), Positives = 137/270 (50%), Gaps = 34/270 (12%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDV 87
           RL GKVA+++GGARG+G + VR     GAKVV  D+ D  G  +A+ LA A   +VH DV
Sbjct: 3   RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADA-ARYVHLDV 61

Query: 88  SLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMAL 147
           +     +  +++ V+ +G L +L NNAG+L          D+   E+  ++ VN+ G+ L
Sbjct: 62  TQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIE----DYALTEWQRILDVNLTGVFL 117

Query: 148 GIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRV 207
           GI+   + M   G G II+ +S+ G+ G +  H YTA+K A+ GLTK+ A ELG  GIRV
Sbjct: 118 GIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRV 177

Query: 208 NCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRS 267
           N I P  V T M         D   ED    F                      G     
Sbjct: 178 NSIHPGLVKTPMT--------DWVPEDI---FQTAL------------------GRAAEP 208

Query: 268 KDIAEAALYLASDESRYVSGHNLVVDGGVT 297
            +++   +YLASDES Y +G   VVDGG  
Sbjct: 209 VEVSNLVVYLASDESSYSTGAEFVVDGGTV 238

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score =  174 bits (443), Expect = 4e-54
 Identities = 84/275 (30%), Positives = 125/275 (45%), Gaps = 30/275 (10%)

Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPA---PVTFVHC 85
           L G+VA++TGG+RG+G    +  A  G  VV+A       S  A  L            C
Sbjct: 3   LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRC 62

Query: 86  DVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGM 145
           DVS  E+++ L+ +   ++G+LD + N AG+     +     +F  DEF  V+ VN+ G 
Sbjct: 63  DVSNYEEVKKLLEAVKEKFGKLDTVVNAAGIN----RRHPAEEFPLDEFRQVIEVNLFGT 118

Query: 146 ALGIKHAARVMINRGGGCIISTASVAGVMGGLG-PHAYTASKHAIVGLTKNAACELGRYG 204
               + A  ++       II+  S+      +    AY ASK  +  LTK  A E GRYG
Sbjct: 119 YYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGGVASLTKALAKEWGRYG 178

Query: 205 IRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT 264
           IRVN I+P    T M            E+ + M   IP                   G T
Sbjct: 179 IRVNVIAPGWYRTKM----TEAVFSDPEKLDYMLKRIPL------------------GRT 216

Query: 265 LRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTS 299
              +D+   A++LAS+E++YV+G  + VDGG T +
Sbjct: 217 GVPEDLKGVAVFLASEEAKYVTGQIIFVDGGWTAN 251

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

 Score =  174 bits (442), Expect = 5e-54
 Identities = 74/272 (27%), Positives = 114/272 (41%), Gaps = 21/272 (7%)

Query: 31  GKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL--APAPVTFVHCDVS 88
            +VA++TG   GIG    R   + G +V +    +         L  A        CDV 
Sbjct: 2   SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVR 61

Query: 89  LEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALG 148
              +IE L+ + V RYG +D+L NNAG    +    +  +   + + +V+  N+ G+   
Sbjct: 62  SVPEIEALVAAVVERYGPVDVLVNNAG----RPGGGATAELADELWLDVVETNLTGVFRV 117

Query: 149 IKHAARV--MINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIR 206
            K   +   M+ RG G I++ AS  G  G +    Y+ASKH +VG TK    EL R GI 
Sbjct: 118 TKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGIT 177

Query: 207 VNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLR 266
           VN + P  V T M  +   +  D  E            +E          +G      ++
Sbjct: 178 VNAVCPGFVETPMAASVREHYSDIWEVST---------EEAFDRITARVPIGRY----VQ 224

Query: 267 SKDIAEAALYLASDESRYVSGHNLVVDGGVTT 298
             ++AE   YL    +  V+   L V GG+  
Sbjct: 225 PSEVAEMVAYLIGPGAAAVTAQALNVCGGLGN 256

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

 Score =  175 bits (445), Expect = 7e-54
 Identities = 59/274 (21%), Positives = 113/274 (41%), Gaps = 29/274 (10%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLA---PAPVTFVH 84
             +GKVA ITGG  G+G+    L +  GA+ VIA  +  +    A  ++      V  + 
Sbjct: 22  SFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQ 81

Query: 85  CDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKG 144
           CDV   + ++N ++  +   G  +I+ NNA                 + +  +  + + G
Sbjct: 82  CDVRDPDMVQNTVSELIKVAGHPNIVINNA----AGNFISPTERLSPNAWKTITDIVLNG 137

Query: 145 -MALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRY 203
              + ++   +++  + G   +S  ++    G        ++K  +  ++K+ A E G+Y
Sbjct: 138 TAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAMSKSLAAEWGKY 197

Query: 204 GIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGT 263
           G+R N I P  + T    +    +G  E+E   M   IP                   G 
Sbjct: 198 GMRFNVIQPGPIKTKGAFSRLDPTGTFEKE---MIGRIPC------------------GR 236

Query: 264 TLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
               +++A  A +L SD + +++G  +  DGG  
Sbjct: 237 LGTVEELANLAAFLCSDYASWINGAVIKFDGGEE 270

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

 Score =  173 bits (439), Expect = 2e-53
 Identities = 50/266 (18%), Positives = 85/266 (31%), Gaps = 27/266 (10%)

Query: 34  AIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDI 93
           AI+T      G  +    +  G  V   D        L +       T+       E++ 
Sbjct: 3   AIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAE----TYPQLKPMSEQEP 58

Query: 94  ENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAA 153
             LI +  S YG++D+L +N        + + I  +  +++   +          +   A
Sbjct: 59  AELIEAVTSAYGQVDVLVSNDIF---APEFQPIDKYAVEDYRGAVEALQIRPFALVNAVA 115

Query: 154 RVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPF 213
             M  R  G II   S            YT+++     L    + ELG Y I V  I P 
Sbjct: 116 SQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTLANALSKELGEYNIPVFAIGPN 175

Query: 214 GVATSMLVNAWRN--SGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSKDIA 271
            + +      +         E    +      Q+           LG         K++ 
Sbjct: 176 YLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQR-----------LG-------TQKELG 217

Query: 272 EAALYLASDESRYVSGHNLVVDGGVT 297
           E   +LAS    Y++G    + GG  
Sbjct: 218 ELVAFLASGSCDYLTGQVFWLAGGFP 243

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

 Score =  169 bits (429), Expect = 4e-52
 Identities = 82/270 (30%), Positives = 122/270 (45%), Gaps = 32/270 (11%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDV 87
           RL GK  ++TG A GIG AA+ LFAR GA +V  D E+ L +   + L  A    V  DV
Sbjct: 2   RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL-EAEAIAVVADV 60

Query: 88  SLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMAL 147
           S  + +E +    +  +GRL  + + AGV  +        +   + ++ V+RVN+ G  L
Sbjct: 61  SDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSW----NLPLEAWEKVLRVNLTGSFL 116

Query: 148 GIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRV 207
             + A  V+   G   +  + +  G     G   Y A K  +VGL +  A EL R G+RV
Sbjct: 117 VARKAGEVLEEGGSLVLTGSVAGLGAF---GLAHYAAGKLGVVGLARTLALELARKGVRV 173

Query: 208 NCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRS 267
           N + P  + T M               E      P                   G   R 
Sbjct: 174 NVLLPGLIQTPMTAGLP------PWAWEQEVGASPL------------------GRAGRP 209

Query: 268 KDIAEAALYLASDESRYVSGHNLVVDGGVT 297
           +++A+AAL+L S+ES Y++G  L VDGG +
Sbjct: 210 EEVAQAALFLLSEESAYITGQALYVDGGRS 239

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

 Score =  169 bits (429), Expect = 5e-52
 Identities = 53/279 (18%), Positives = 87/279 (31%), Gaps = 44/279 (15%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAP---VTFVH 84
            L  K  I      GIG    R   +   K  +        + LA   A  P   +TF  
Sbjct: 2   DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHT 61

Query: 85  CDVSL-EEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVK 143
            DV++   + + L+     +   +DIL N AG              D  + +  + +N  
Sbjct: 62  YDVTVPVAESKKLLKKIFDQLKTVDILINGAG------------ILDDHQIERTIAINFT 109

Query: 144 GMALGIKHAARVMINR---GGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACEL 200
           G+             R    GG I +  SV G         Y+ASK A+V  T + A   
Sbjct: 110 GLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSLAKLA 169

Query: 201 GRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNL 260
              G+    I+P    T ++ + + +  D E     +    P+Q                
Sbjct: 170 PITGVTAYSINPGITRTPLV-HTFNSWLDVEPRVAELLLSHPTQTS-------------- 214

Query: 261 KGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTS 299
                   +        A +     +G    +D G   +
Sbjct: 215 --------EQCGQNFVKAIEA--NKNGAIWKLDLGTLEA 243

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

 Score =  168 bits (425), Expect = 3e-51
 Identities = 75/273 (27%), Positives = 122/273 (44%), Gaps = 20/273 (7%)

Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADV-EDTLGSVLASTLA---PAPVTFVH 84
           L+GKVA++TG   GIG       A  GA +V+    +      + + LA      V +  
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDG 61

Query: 85  CDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKG 144
            D+S  E +  L+++ V + GR+DIL NN       +    I DF  +++D ++ +N+  
Sbjct: 62  ADLSKGEAVRGLVDNAVRQMGRIDILVNN----AGIQHTALIEDFPTEKWDAILALNLSA 117

Query: 145 MALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYG 204
           +  G   A   M  +G G II+ AS  G++      AY A+KH +VG TK  A E    G
Sbjct: 118 VFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQG 177

Query: 205 IRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT 264
           I  N I P  V T ++        +          G+  +   R++              
Sbjct: 178 ITANAICPGWVRTPLVEKQISALAEKN--------GVDQETAARELLSEKQPSLQF---- 225

Query: 265 LRSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
           +  + +   A++LASD +  ++G  + VDGG T
Sbjct: 226 VTPEQLGGTAVFLASDAAAQITGTTVSVDGGWT 258

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  166 bits (422), Expect = 5e-51
 Identities = 59/217 (27%), Positives = 88/217 (40%), Gaps = 9/217 (4%)

Query: 27  RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL--APAPVTFVH 84
           + + G++ +ITG   GIG      FA+  +K+V+ D+        A+      A V    
Sbjct: 3   KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFV 62

Query: 85  CDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKG 144
            D S  EDI +      +  G + IL NNAGV+        +      + +    VNV  
Sbjct: 63  VDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVY----TSDLFATQDPQIEKTFEVNVLA 118

Query: 145 MALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRY- 203
                K     M     G I++ AS AG +      AY +SK A VG  K    EL    
Sbjct: 119 HFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDELAALQ 178

Query: 204 --GIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMN 238
             G++  C+ P  V T  + N   + G   E +E +N
Sbjct: 179 ITGVKTTCLCPNFVNTGFIKNPSTSLGPTLEPEEVVN 215

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

 Score =  164 bits (415), Expect = 6e-50
 Identities = 86/273 (31%), Positives = 130/273 (47%), Gaps = 19/273 (6%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDV 87
           RL+GK A+ITG ARGIG A    + R GA+V IAD+        A+ + PA    +  DV
Sbjct: 2   RLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPA-ACAIALDV 60

Query: 88  SLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMAL 147
           + +  I+  +   + R+G +DIL NN            I++   + +D +  +NV G   
Sbjct: 61  TDQASIDRCVAELLDRWGSIDILVNN----AALFDLAPIVEITRESYDRLFAINVSGTLF 116

Query: 148 GIKHAARVMI-NRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIR 206
            ++  AR MI    GG II+ AS AG  G      Y A+K A++ LT++A   L R+GI 
Sbjct: 117 MMQAVARAMIAGGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLIRHGIN 176

Query: 207 VNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLR 266
           VN I+P  V             D E         +P  ++ R++   V       G   R
Sbjct: 177 VNAIAPGVVDGEHWDGVDAKFADYE--------NLPRGEKKRQVGAAVP-----FGRMGR 223

Query: 267 SKDIAEAALYLASDESRYVSGHNLVVDGGVTTS 299
           ++D+   A++LA+ E+ Y+      VDGG   S
Sbjct: 224 AEDLTGMAIFLATPEADYIVAQTYNVDGGNWMS 256

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score =  163 bits (413), Expect = 9e-50
 Identities = 68/270 (25%), Positives = 122/270 (45%), Gaps = 32/270 (11%)

Query: 32  KVAIITGGARGIGEAAVRLFARHGAKVVIADV--EDTLGSVLASTLA-PAPVTFVHCDVS 88
            V ++TG +RGIG+A      + G KV++           V     A          DVS
Sbjct: 2   PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVS 61

Query: 89  LEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALG 148
            E D+E ++ + +  +G +D++ NN        +   +I     ++D V+ +N+ G+ L 
Sbjct: 62  KEADVEAMMKTAIDAWGTIDVVVNN----AGITRDTLLIRMKKSQWDEVIDLNLTGVFLC 117

Query: 149 IKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVN 208
            + A ++M+ +  G II+ ASV G++G +G   Y A+K  ++G +K AA E     I VN
Sbjct: 118 TQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVN 177

Query: 209 CISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSK 268
            + P  +A+ M           E+ ++ +   IP                   G T + +
Sbjct: 178 VVCPGFIASDMTAKLG------EDMEKKILGTIPL------------------GRTGQPE 213

Query: 269 DIAEAALYLA-SDESRYVSGHNLVVDGGVT 297
           ++A    +LA S  + Y++G    +DGG+ 
Sbjct: 214 NVAGLVEFLALSPAASYITGQAFTIDGGIA 243

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

 Score =  163 bits (414), Expect = 1e-49
 Identities = 82/276 (29%), Positives = 126/276 (45%), Gaps = 30/276 (10%)

Query: 26  HRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADV--EDTLGSVLAS-TLAPAPVTF 82
           ++ LEGKV +ITG + G+G++    FA   AKVV+     ED   SVL            
Sbjct: 2   YKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIA 61

Query: 83  VHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNV 142
           V  DV++E D+ NL+ S +  +G+LD++ NNAG+      H    +    +++ V+  N+
Sbjct: 62  VKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSH----EMSLSDWNKVIDTNL 117

Query: 143 KGMALGIKHAAR-VMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELG 201
            G  LG + A +  + N   G +I+ +SV   +       Y ASK  +  +T+  A E  
Sbjct: 118 TGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYA 177

Query: 202 RYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLK 261
             GIRVN I P  + T +            E+   +   IP                   
Sbjct: 178 PKGIRVNNIGPGAINTPI----NAEKFADPEQRADVESMIPM------------------ 215

Query: 262 GTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
           G     ++IA  A +LAS E+ YV+G  L  DGG+T
Sbjct: 216 GYIGEPEEIAAVAAWLASSEASYVTGITLFADGGMT 251

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

 Score =  160 bits (407), Expect = 6e-49
 Identities = 55/269 (20%), Positives = 108/269 (40%), Gaps = 40/269 (14%)

Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVS 88
           +  K  ++   +RGIG A   + ++ GA+V I    + L       L  +   +V CD+ 
Sbjct: 2   IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEEL-------LKRSGHRYVVCDLR 54

Query: 89  LEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALG 148
                   ++    +   +DIL  NA       K     +   ++F   +      M   
Sbjct: 55  ------KDLDLLFEKVKEVDILVLNA----GGPKAGFFDELTNEDFKEAIDSLFLNMIKI 104

Query: 149 IKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVN 208
           +++    M  +G G I++  S + +      +   +++ A+ G  K  + E+  YGI VN
Sbjct: 105 VRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEVAPYGITVN 164

Query: 209 CISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSK 268
           C++P    T  +          EE+ + +   IP                       + +
Sbjct: 165 CVAPGWTETERVKELL-----SEEKKKQVESQIPM------------------RRMAKPE 201

Query: 269 DIAEAALYLASDESRYVSGHNLVVDGGVT 297
           +IA    +L S+++ Y++G  +VVDGG++
Sbjct: 202 EIASVVAFLCSEKASYLTGQTIVVDGGLS 230

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  159 bits (404), Expect = 1e-48
 Identities = 62/276 (22%), Positives = 112/276 (40%), Gaps = 40/276 (14%)

Query: 22  APPSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVT 81
           A P       +  ++TGG RGIG A  +  A  G KV +               AP  + 
Sbjct: 1   AKPP---FVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSG---------APKGLF 48

Query: 82  FVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVN 141
            V  DV+  + ++    +     G +++L +NA           ++    ++F+ V+  N
Sbjct: 49  GVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNA----GLSADAFLMRMTEEKFEKVINAN 104

Query: 142 VKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELG 201
           + G     + A+R M     G +I   SV+G+ G      Y ASK  ++G+ ++ A EL 
Sbjct: 105 LTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAGVIGMARSIARELS 164

Query: 202 RYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLK 261
           +  +  N ++P  + T M              DE +  G       +++           
Sbjct: 165 KANVTANVVAPGYIDTDMT----------RALDERIQQGALQFIPAKRV----------- 203

Query: 262 GTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
                  ++A    +LAS+++ Y+SG  + VDGG+ 
Sbjct: 204 ---GTPAEVAGVVSFLASEDASYISGAVIPVDGGMG 236

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

 Score =  158 bits (400), Expect = 9e-48
 Identities = 50/272 (18%), Positives = 92/272 (33%), Gaps = 27/272 (9%)

Query: 29  LEGKVAIITG--GARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAP-APVTFVHC 85
           L GK A++ G    R +G A        GA+V ++   + L                   
Sbjct: 6   LSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRA 65

Query: 86  DVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGM 145
           DV+ +E+++ L       +G LD L +       +      ID    ++   + V+   +
Sbjct: 66  DVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSL 125

Query: 146 ALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGI 205
               + A  ++    GG I++    A        +    +K A+    +  A ELG  G+
Sbjct: 126 VAVARRAEPLLRE--GGGIVTLTYYASEKVVPKYNVMAIAKAALEASVRYLAYELGPKGV 183

Query: 206 RVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL 265
           RVN IS   V T    +    +   +   +         +E                   
Sbjct: 184 RVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQE------------------- 224

Query: 266 RSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
              ++    L+L S  +  ++G  + VD G  
Sbjct: 225 ---EVGNLGLFLLSPLASGITGEVVYVDAGYH 253

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

 Score =  154 bits (390), Expect = 4e-46
 Identities = 78/269 (28%), Positives = 114/269 (42%), Gaps = 20/269 (7%)

Query: 32  KVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL--APAPVTFVHCDVSL 89
           KVA++TG  +GIG+A      + G  V IAD  D     +AS +  A      V  DVS 
Sbjct: 2   KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSD 61

Query: 90  EEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMA-LG 148
            + +   +       G  D++ NNAG          I     +  D V  +NVKG+    
Sbjct: 62  RDQVFAAVEQARKTLGGFDVIVNNAG----VAPSTPIESITPEIVDKVYNINVKGVIWGI 117

Query: 149 IKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVN 208
                       GG II+  S AG +G      Y++SK A+ GLT+ AA +L   GI VN
Sbjct: 118 QAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVN 177

Query: 209 CISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSK 268
              P  V T M     R   +          G P      +  + ++      G     +
Sbjct: 178 GYCPGIVKTPMWAEIDRQVSEAA--------GKPLGYGTAEFAKRIT-----LGRLSEPE 224

Query: 269 DIAEAALYLASDESRYVSGHNLVVDGGVT 297
           D+A    YLAS +S Y++G +L++DGG+ 
Sbjct: 225 DVAACVSYLASPDSDYMTGQSLLIDGGMV 253

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} Length = 266

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

 Score =  153 bits (386), Expect = 1e-45
 Identities = 68/288 (23%), Positives = 107/288 (37%), Gaps = 45/288 (15%)

Query: 33  VAIITGGARGIGEAAVRLFARHGAKVVIADV-EDTLGSVLASTL-------APAPVTFVH 84
            A+ITGGAR IG +      + G +VV+     +     L + L       A      + 
Sbjct: 3   AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLS 62

Query: 85  CDVSLEEDIENLINSTVSRYGRLDILYNNAGVL-------GNQRKHKSIIDFDADEFDNV 137
              SL +  E++I+ +   +GR D+L NNA          G+     +       +   +
Sbjct: 63  LSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAEL 122

Query: 138 MRVNVKGMALGIKHAARVMINRGGGCIIST-----ASVAGVMGGLGPHAYTASKHAIVGL 192
              N       I+  AR     G     +            +   G   YT +KHA+ GL
Sbjct: 123 FGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFCVYTMAKHALGGL 182

Query: 193 TKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEE 252
           T+ AA EL    IRVN ++P                  +E  E     +P          
Sbjct: 183 TRAAALELAPRHIRVNAVAPGLSLLPP--------AMPQETQEEYRRKVP---------- 224

Query: 253 FVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTSR 300
               LG  + +      IA+A  +L S ++ Y++G  L VDGG+  +R
Sbjct: 225 ----LGQSEASA---AQIADAIAFLVSKDAGYITGTTLKVDGGLILAR 265

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score =  151 bits (382), Expect = 4e-45
 Identities = 66/272 (24%), Positives = 109/272 (40%), Gaps = 42/272 (15%)

Query: 32  KVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEE 91
           + A++TGGA G+G AA       G +VV+ D+      ++           V  DV+ EE
Sbjct: 2   RSALVTGGASGLGRAAALALKARGYRVVVLDLRREGEDLIY----------VEGDVTREE 51

Query: 92  DIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKH 151
           D+   +         L  + + AGV   ++          + F  V+ VN+ G    ++ 
Sbjct: 52  DVRRAVA-RAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRL 110

Query: 152 AARV------MINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGI 205
           AA              G I++TASVA   G +G  AY ASK  +V LT  AA EL  +GI
Sbjct: 111 AAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASKGGVVALTLPAARELAGWGI 170

Query: 206 RVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL 265
           RV  ++P    T +L          E+    +   +P    + + E              
Sbjct: 171 RVVTVAPGLFDTPLLQGLP------EKAKASLAAQVPFPPRLGRPE-------------- 210

Query: 266 RSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
              + A   L++  +    ++G  + +DG + 
Sbjct: 211 ---EYAALVLHILEN--PMLNGEVVRLDGALR 237

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} Length = 240

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

 Score =  150 bits (380), Expect = 8e-45
 Identities = 58/276 (21%), Positives = 92/276 (33%), Gaps = 48/276 (17%)

Query: 32  KVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL---------APAPVTF 82
            + +ITG  +GIG A    FAR        +    L S  A+ L           A    
Sbjct: 2   HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDT 61

Query: 83  VHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNV 142
           +  D+S   D+  L    V RYG +D L NN        +  ++ D   ++FD  M  N+
Sbjct: 62  ITADISDMADVRRLTTHIVERYGHIDCLVNN----AGVGRFGALSDLTEEDFDYTMNTNL 117

Query: 143 KGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGR 202
           KG     +    +M  +  G I    SVA          Y  SK    GL +       +
Sbjct: 118 KGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRLYARK 177

Query: 203 YGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKG 262
             +R+  + P  V T M                             K+++       ++ 
Sbjct: 178 CNVRITDVQPGAVYTPMW---------------------------GKVDD------EMQA 204

Query: 263 TTLRSKDIAEAALYLASDESRYVSGHNLV--VDGGV 296
             +  +DIA   +      SR V    ++    G +
Sbjct: 205 LMMMPEDIAAPVVQAYLQPSRTVVEEIILRPTSGDI 240

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  141 bits (357), Expect = 3e-41
 Identities = 54/267 (20%), Positives = 97/267 (36%), Gaps = 31/267 (11%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADV-EDTLGSVLASTLA--PAPVTFVH 84
            L+GK  I+TG ++GIG       A+ GA VV+    ++TL  V++  L    A   ++ 
Sbjct: 11  MLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIA 70

Query: 85  CDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKG 144
             +      E  +       G LD+L  N           ++   D       M VN   
Sbjct: 71  GTMEDMTFAEQFVAQAGKLMGGLDMLILNHIT----NTSLNLFHDDIHHVRKSMEVNFLS 126

Query: 145 MALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELG--R 202
             +    A  ++  +  G I+  +S+AG +      AY+ASK A+ G   +   E    R
Sbjct: 127 YVVLTVAALPMLK-QSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSR 185

Query: 203 YGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKG 262
             + +       + T   + A                  P ++   ++         +KG
Sbjct: 186 VNVSITLCVLGLIDTETAMKAV--------SGIVHMQAAPKEECALEI---------IKG 228

Query: 263 TTLRSKDI----AEAALYLASDESRYV 285
             LR +++    +     L  + SR +
Sbjct: 229 GALRQEEVYYDSSLWTTLLIRNPSRKI 255

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

 Score =  139 bits (350), Expect = 3e-40
 Identities = 45/276 (16%), Positives = 88/276 (31%), Gaps = 28/276 (10%)

Query: 28  RLEGKVAIITGGAR--GIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAP-VTFVH 84
            L GK  ++TG A    I     +   R GA++      D L   +    A       + 
Sbjct: 2   FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQ 61

Query: 85  CDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQR-KHKSIIDFDADEFDNVMRVNVK 143
           CDV+ +  I+ +       + + D   ++ G     +     +     + F     ++  
Sbjct: 62  CDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSY 121

Query: 144 GMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRY 203
                 K    ++    G  +++ + +         +    +K ++    +  A  +G  
Sbjct: 122 SFVAMAKACRSMLNP--GSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMGPE 179

Query: 204 GIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGT 263
           G+RVN IS   + T                +           E                 
Sbjct: 180 GVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIE----------------- 222

Query: 264 TLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTS 299
                D+  +A +L SD S  +SG  + VDGG + +
Sbjct: 223 -----DVGNSAAFLCSDLSAGISGEVVHVDGGFSIA 253

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  136 bits (344), Expect = 2e-39
 Identities = 54/278 (19%), Positives = 94/278 (33%), Gaps = 36/278 (12%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFAR---HGAKVVIADV-EDTLGSV---LASTLAPAPV 80
            L   V ++TG +RG G A     AR    G+ ++++   E  L  +   L +      V
Sbjct: 3   GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKV 62

Query: 81  TFVHCDVSLEEDIENLINSTVS----RYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDN 136
                D+  E  ++ L+++          +  +L NNA  LG+  K   +   D  E +N
Sbjct: 63  VLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSK-GFLNVNDLAEVNN 121

Query: 137 VMRVNVKGMALGIKHAARVMINRGGGCII--STASVAGVMGGLGPHAYTASKHAIVGLTK 194
              +N+  M            +  G      + +S+  +    G   Y A K A   L +
Sbjct: 122 YWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKGWGLYCAGKAARDMLYQ 181

Query: 195 NAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFV 254
             A E     +RV   +P  +   M   A   S D  E    +                 
Sbjct: 182 VLAAE--EPSVRVLSYAPGPLDNDMQQLARETSKD-PELRSKLQKLKSD----------- 227

Query: 255 SGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVV 292
                  G  +     A+  L L   ++ + SG ++  
Sbjct: 228 -------GALVDCGTSAQKLLGLLQKDT-FQSGAHVDF 257

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  135 bits (341), Expect = 1e-38
 Identities = 50/267 (18%), Positives = 86/267 (32%), Gaps = 24/267 (8%)

Query: 32  KVAIITGGARGIGEAAVRLFARHGAKVVIADV--------EDTLGSVLASTLAPAPVTFV 83
            V +ITG + GIG       A   ++                   +  A    P  +  +
Sbjct: 3   TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETL 62

Query: 84  HCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVK 143
             DV   + +                  +             +     D   +V+ VNV 
Sbjct: 63  QLDVRDSKSVAAARERVTEGR------VDVLVCNAGLGLLGPLEALGEDAVASVLDVNVV 116

Query: 144 GMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRY 203
           G    ++     M  RG G ++ T SV G+MG      Y ASK A+ GL ++ A  L  +
Sbjct: 117 GTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPF 176

Query: 204 GIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGT 263
           G+ ++ I    V T+ +     +  +  +  +   F    Q      + F     N    
Sbjct: 177 GVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQN---- 232

Query: 264 TLRSKDIAEAALYLASDES---RYVSG 287
               +++AE  L          RY + 
Sbjct: 233 ---PEEVAEVFLTALRAPKPTLRYFTT 256

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  133 bits (336), Expect = 2e-38
 Identities = 65/273 (23%), Positives = 101/273 (36%), Gaps = 32/273 (11%)

Query: 27  RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCD 86
           R ++G VA+ITGGA G+G A        GA  V+ D+ ++ G   A  L    V      
Sbjct: 1   RSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADV 60

Query: 87  VSLEEDIENLINSTVSRYGRLDILYNN-AGVLGNQRKHKSIIDFDADEFDNVMRVNVKGM 145
            S ++    L  +          +      V       K       ++F  V+ VN+ G 
Sbjct: 61  TSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGT 120

Query: 146 ALGIKHAARVMINR------GGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACE 199
              I+  A  M           G II+TASVA   G +G  AY+ASK  IVG+T   A +
Sbjct: 121 FNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARD 180

Query: 200 LGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGN 259
           L   GIRV  I+P    T +L +        E+    +   +P                 
Sbjct: 181 LAPIGIRVMTIAPGLFGTPLLTSLP------EKVCNFLASQVP----------------- 217

Query: 260 LKGTTLRSKDIAEAALYLASDESRYVSGHNLVV 292
                    + A     +    + +++G  + +
Sbjct: 218 FPSRLGDPAEYAHLVQAIIE--NPFLNGEVIRL 248

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  133 bits (335), Expect = 3e-38
 Identities = 38/275 (13%), Positives = 76/275 (27%), Gaps = 51/275 (18%)

Query: 30  EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSL 89
           E +  ++ GG   +G   V+ F      V   D        +      +    V    S 
Sbjct: 1   EARRVLVYGGRGALGSRCVQAFRARNWWVASID--------VVENEEASASVIVKMTDSF 52

Query: 90  EEDIENLINSTVSRYG--RLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMAL 147
            E  + +        G  ++D +   A   G      +         D + + ++    +
Sbjct: 53  TEQADQVTAEVGKLLGDQKVDAILCVA---GGWAGGNAKSKSLFKNCDLMWKQSIWTSTI 109

Query: 148 GIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELG--RYGI 205
               A + +     G +    + A + G  G   Y  +K A+  L ++ A +      G 
Sbjct: 110 SSHLATKHLKEG--GLLTLAGAKAALDGTPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGA 167

Query: 206 RVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL 265
               + P  + T                        P  ++     +F         +  
Sbjct: 168 AAIAVLPVTLDT------------------------PMNRKSMPEADF--------SSWT 195

Query: 266 RSKDIAEAALYLASDESRYVSGHNLVV--DGGVTT 298
             + + E      +   R  SG  + V    G T 
Sbjct: 196 PLEFLVETFHDWITGNKRPNSGSLIQVVTTDGKTE 230

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  127 bits (319), Expect = 1e-35
 Identities = 39/212 (18%), Positives = 73/212 (34%), Gaps = 24/212 (11%)

Query: 29  LEGKVAIITGGARGIGEAAVRLFARHGAKV-VIADVEDTLGSVLASTLAPAPVTFVHCDV 87
           +     ++TG  RGIG   V+   +      +IA   D   +    ++  + V  +   V
Sbjct: 1   MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTV 60

Query: 88  SLEEDIENLINSTVSRYGR--LDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGM 145
           + ++ ++  ++      G   L +L NNAGVL +   + +  + +       + VN   +
Sbjct: 61  TCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLS---YGTNTEPNRAVIAEQLDVNTTSV 117

Query: 146 ALGIKHAARVMINRGGGCIISTASV------------------AGVMGGLGPHAYTASKH 187
            L  +    ++ N          SV                            AY  SK 
Sbjct: 118 VLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKA 177

Query: 188 AIVGLTKNAACELGRYGIRVNCISPFGVATSM 219
           AI    +  A +L    + V    P  V T++
Sbjct: 178 AINMFGRTLAVDLKDDNVLVVNFCPGWVQTNL 209

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score =  127 bits (319), Expect = 1e-35
 Identities = 52/284 (18%), Positives = 100/284 (35%), Gaps = 54/284 (19%)

Query: 32  KVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEE 91
            + +I+G A GIG A  ++    G ++V  D+ D                 V  D+S  E
Sbjct: 2   SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRD---------------AEVIADLSTAE 46

Query: 92  DIENLINSTVSRY-GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMR----------- 139
             +  I   +++    +D L   AG+    +   +++  +      +M            
Sbjct: 47  GRKQAIADVLAKCSKGMDGLVLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQ 106

Query: 140 -----VNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPH-AYTASKHAIVGLT 193
                ++    A        + +    G      ++    G  G + AY  SK+A+    
Sbjct: 107 PAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAYAGSKNALTVAV 166

Query: 194 KNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEF 253
           +  A   G  G+R+N I+P    T +L    ++                  +    + +F
Sbjct: 167 RKRAAAWGEAGVRLNTIAPGATETPLLQAGLQD-----------------PRYGESIAKF 209

Query: 254 VSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT 297
           V  +G          ++A    +L S  + YV G  +V+DGG+ 
Sbjct: 210 VPPMGRR----AEPSEMASVIAFLMSPAASYVHGAQIVIDGGID 249

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

 Score =  122 bits (305), Expect = 1e-33
 Identities = 51/274 (18%), Positives = 95/274 (34%), Gaps = 27/274 (9%)

Query: 28  RLEGKVAIITGGA--RGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLA-PAPVTFVH 84
            L+GK  +I G A  + I     +     GA +    + ++L   +              
Sbjct: 2   FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYE 61

Query: 85  CDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKG 144
            DVS EE  ++L NS     G LD + ++      +    S+++     F+  M ++V  
Sbjct: 62  LDVSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISV-- 119

Query: 145 MALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYG 204
            +L         +   G  +++ + +         +    +K A+    +  A +LG++ 
Sbjct: 120 YSLIELTNTLKPLLNNGASVLTLSYLGSTKYMAHYNVMGLAKAALESAVRYLAVDLGKHH 179

Query: 205 IRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT 264
           IRVN +S   + T        +           N      ++   +E             
Sbjct: 180 IRVNALSAGPIRT-----LASSGIADFRMILKWNEINAPLRKNVSLE------------- 221

Query: 265 LRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT 298
               ++  A +YL S  S  VSG    VD G   
Sbjct: 222 ----EVGNAGMYLLSSLSSGVSGEVHFVDAGYHV 251

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  119 bits (300), Expect = 9e-33
 Identities = 58/315 (18%), Positives = 91/315 (28%), Gaps = 96/315 (30%)

Query: 32  KVAIITGGARGIGEAAVRLFAR-HGAKVVIADVEDTLGSVLASTL--APAPVTFVHCDVS 88
            VA++TGG +GIG A VR   R     VV+   + T G      L        F   D+ 
Sbjct: 4   HVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDID 63

Query: 89  LEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALG 148
             + I  L +     YG LD+L NNAG+        +       + +  M+ N  G    
Sbjct: 64  DLQSIRALRDFLRKEYGGLDVLVNNAGIAF----KVADPTPFHIQAEVTMKTNFFGTRDV 119

Query: 149 IKHAARVMINRGGGCIISTASVAGVMG--------------------------------- 175
                 ++  +  G +++ +S+  V                                   
Sbjct: 120 CTELLPLI--KPQGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDT 177

Query: 176 --------GLGPHAYTASKHAIVGLTKNAACELGRY----GIRVNCISPFGVATSMLVNA 223
                   G    AY  +K  +  L++  A +L        I +N   P  V T M    
Sbjct: 178 KKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDM---- 233

Query: 224 WRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSKDIAEAALYLA--SDE 281
                    E                                   + AE  +YLA    +
Sbjct: 234 AGPKATKSPE-----------------------------------EGAETPVYLALLPPD 258

Query: 282 SRYVSGHNLVVDGGV 296
           +    G   V +  V
Sbjct: 259 AEGPHGQ-FVSEKRV 272

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} Length = 284

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

 Score =  117 bits (292), Expect = 2e-31
 Identities = 56/305 (18%), Positives = 96/305 (31%), Gaps = 62/305 (20%)

Query: 33  VAIITGGARGIGEAAVRLFARHGAKVVIADV-EDTLGSVLASTLA--------------- 76
           VA++TG A+ +G +        G  V +         + L++TL                
Sbjct: 4   VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLS 63

Query: 77  -----PAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLG----------NQR 121
                P         V+L      L+ +  + +GR D+L NNA                 
Sbjct: 64  NVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHE 123

Query: 122 KHKSIIDFDADEFDNVMRVNVKGMALGIKHA------ARVMINRGGGCIISTASVAGVMG 175
                 +       ++   N       IK                   II+         
Sbjct: 124 PCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQP 183

Query: 176 GLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDE 235
            LG   YT +K A+ GLT++AA EL    IRVN + P                      E
Sbjct: 184 LLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD--------DMPPAVWE 235

Query: 236 CMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGG 295
                +P  +                       ++++  ++L S +++Y++G  + VDGG
Sbjct: 236 GHRSKVPLYQRDSSAA-----------------EVSDVVIFLCSSKAKYITGTCVKVDGG 278

Query: 296 VTTSR 300
            + +R
Sbjct: 279 YSLTR 283

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score =  111 bits (277), Expect = 8e-30
 Identities = 51/275 (18%), Positives = 94/275 (34%), Gaps = 53/275 (19%)

Query: 31  GKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLE 90
           GKV I+ GG   +G A +  F ++G  V+  D+        A+  A + +  V  + +  
Sbjct: 3   GKV-IVYGGKGALGSAILEFFKKNGYTVLNIDLS-------ANDQADSNI-LVDGNKNWT 53

Query: 91  EDIENLINSTVS--RYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALG 148
           E  ++++  T S  +  ++D ++  A   G      +         D +++ +V   A+ 
Sbjct: 54  EQEQSILEQTASSLQGSQVDGVFCVA---GGWAGGSASSKDFVKNADLMIKQSVWSSAIA 110

Query: 149 IKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELG--RYGIR 206
            K        + GG +  T + A +        Y  +K A+  LT + A +         
Sbjct: 111 AKL--ATTHLKPGGLLQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSA 168

Query: 207 VNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLR 266
           V  I P  + T M              +   +   P                        
Sbjct: 169 VLTIMPVTLDTPMNRKWM--------PNADHSSWTPLS---------------------- 198

Query: 267 SKDIAEAAL-YLASDESRYVSGHNLVV--DGGVTT 298
              I+E  L +     SR  SG  L +  + G +T
Sbjct: 199 --FISEHLLKWTTETSSRPSSGALLKITTENGTST 231

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

 Score =  107 bits (267), Expect = 4e-28
 Identities = 43/277 (15%), Positives = 89/277 (32%), Gaps = 18/277 (6%)

Query: 28  RLEGKVAIITGGA--RGIGEAAVRLFARHGAKVVIADV-EDTLGSVLASTLAP--APVTF 82
            L+GK  +++G      I     R+    GA++V+       L   +   L      +  
Sbjct: 3   LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLEL 62

Query: 83  VHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNV 142
              +      +   +   +    +LD + ++ G     +    I  F    + +V +   
Sbjct: 63  DVQNEEHLASLAGRVTEAIGAGNKLDGVVHSIGF--MPQTGMGINPFFDAPYADVSKGIH 120

Query: 143 KGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGR 202
                    A  ++     G  I              +  T +K A+  + +  A E G+
Sbjct: 121 ISAYSYASMAKALLPIMNPGGSIVGMDFDPSRAMPAYNWMTVAKSALESVNRFVAREAGK 180

Query: 203 YGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKG 262
           YG+R N ++   + T  +      +   E   +           ++ +EE       +  
Sbjct: 181 YGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQ-----------IQLLEEGWDQRAPIGW 229

Query: 263 TTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTS 299
               +  +A+    L SD     +G  +  DGG  T 
Sbjct: 230 NMKDATPVAKTVCALLSDWLPATTGDIIYADGGAHTQ 266

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 329

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score =  100 bits (248), Expect = 5e-25
 Identities = 40/325 (12%), Positives = 93/325 (28%), Gaps = 61/325 (18%)

Query: 31  GKVAIITGGA--RGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPA---------- 78
             +  I G     G G    +  ++   K++           + +               
Sbjct: 2   EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKD 61

Query: 79  ------------------------PVTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNA 114
                                          ++     IE++ N    +YG++++L ++ 
Sbjct: 62  KKMNILDMLPFDASFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSL 121

Query: 115 GVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVM 174
                 +K   +++     + + +  +   +    K+   +M  +     ++    +  +
Sbjct: 122 ANAKEVQK--DLLNTSRKGYLDALSKSSYSLISLCKYFVNIMKPQSSIISLTY-HASQKV 178

Query: 175 GGLGPHAYTASKHAIVGLTKNAACELGR-YGIRVNCISPFGVATSMLVNAWRNSGDGEEE 233
                   +++K A+   T+  A  LGR Y IR+N IS   + +       + +   E  
Sbjct: 179 VPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYENN 238

Query: 234 DECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSK---------------------DIAE 272
                                     +  +   +                      DI  
Sbjct: 239 TNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGS 298

Query: 273 AALYLASDESRYVSGHNLVVDGGVT 297
            A +L S ESR ++G  + VD G+ 
Sbjct: 299 VASFLLSRESRAITGQTIYVDNGLN 323

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 95.2 bits (235), Expect = 9e-24
 Identities = 40/212 (18%), Positives = 79/212 (37%), Gaps = 23/212 (10%)

Query: 32  KVAIITGGARGIGEAAVRLF---ARHGAKVVIADV-EDTLGSVLASTLAPAPVTFVHCDV 87
              +ITG  RG+G   V+      +    +       +    +       + +  +  D+
Sbjct: 3   NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDL 62

Query: 88  SLEEDIENLINST--VSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGM 145
              +  + L+     V++   L++L+NNAG+     K   I    + E  + ++ N    
Sbjct: 63  RNFDAYDKLVADIEGVTKDQGLNVLFNNAGI---APKSARITAVRSQELLDTLQTNTVVP 119

Query: 146 ALGIKHAARVMINRGG-----------GCIISTASVAGVMGGL---GPHAYTASKHAIVG 191
            +  K    ++                  II+ +S+ G + G    G +AY  SK A+  
Sbjct: 120 IMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSALNA 179

Query: 192 LTKNAACELGRYGIRVNCISPFGVATSMLVNA 223
            TK+ + +L    I    + P  V T M  ++
Sbjct: 180 ATKSLSVDLYPQRIMCVSLHPGWVKTDMGGSS 211

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 92.5 bits (228), Expect = 3e-22
 Identities = 48/307 (15%), Positives = 88/307 (28%), Gaps = 60/307 (19%)

Query: 28  RLEGKVAIITGGA--RGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAP------ 79
            L GK A I G A   G G A  +  A  GA++++      L     S            
Sbjct: 5   DLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVL 64

Query: 80  ----------------------------VTFVHCDVSLEEDIENLINSTVSRYGRLDILY 111
                                               S    ++         +G +DIL 
Sbjct: 65  PDGSLMEIKKVYPLDAVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILV 124

Query: 112 NNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVA 171
           ++          K +++     +   +  +       + H   +M   G    ++  +  
Sbjct: 125 HSLA--NGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNPGGASISLTYIASE 182

Query: 172 GVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGE 231
            ++ G G    +A           A     +  IRVN IS       +   A +  G  +
Sbjct: 183 RIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAG----PLGSRAAKAIGFID 238

Query: 232 EEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLV 291
              E      P QK +                   + ++  AA +L S  +  ++G  + 
Sbjct: 239 TMIEYSYNNAPIQKTLT------------------ADEVGNAAAFLVSPLASAITGATIY 280

Query: 292 VDGGVTT 298
           VD G+ +
Sbjct: 281 VDNGLNS 287

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} Length = 191

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

 Score = 78.0 bits (191), Expect = 7e-18
 Identities = 22/180 (12%), Positives = 51/180 (28%), Gaps = 18/180 (10%)

Query: 28  RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL-APAPVTFVHCD 86
            ++GK A++  G   +G  +  L A  GA+VV+   +       A ++     V     +
Sbjct: 20  SVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAE 79

Query: 87  VSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMA 146
            + +      +            ++    +         +       + N   + +    
Sbjct: 80  TADDASRAEAV-------KGAHFVFTAGAI--------GLELLPQAAWQNESSIEIVADY 124

Query: 147 LGIKHAARVMIN-RGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGI 205
                     I+    G         G +G +G       +  I  L +++        I
Sbjct: 125 NAQPPLGIGGIDATDKGKEYGGKRAFGALG-IGGLKLKLHRACIAKLFESSEGVFDAEEI 183

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

 Score = 70.8 bits (172), Expect = 7e-15
 Identities = 27/194 (13%), Positives = 55/194 (28%), Gaps = 9/194 (4%)

Query: 31  GKVAIITGGARGIGEAAVRLFARHGAK-VVIADVEDTLGSVLASTLAPAPVTFVHCDVSL 89
               ++TGG  G+G    R  AR GA  +++              +A          V+ 
Sbjct: 9   TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAA 68

Query: 90  EEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGI 149
            +  +      +      D+  +            ++     +  +   R  V G     
Sbjct: 69  CDVTDRESVRELLGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGA---- 124

Query: 150 KHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNC 209
           ++   +         +  +S A   G  G   Y      + GL    A +    G+    
Sbjct: 125 RNLHELTRELDLTAFVLFSSFASAFGAPGLGGYAPGNAYLDGL----AQQRRSDGLPATA 180

Query: 210 ISPFGVATSMLVNA 223
           ++    A S +   
Sbjct: 181 VAWGTWAGSGMAEG 194

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

 Score = 67.8 bits (164), Expect = 5e-14
 Identities = 22/194 (11%), Positives = 53/194 (27%), Gaps = 7/194 (3%)

Query: 32  KVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPA--PVTFVHCDVSL 89
           +VA++ GG   +G+      A  G ++V+    +      A+         +        
Sbjct: 2   RVALL-GGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASITGMKNED 60

Query: 90  EEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGI 149
             +  ++   T+     +D   +      N  + K ++                      
Sbjct: 61  AAEACDIAVLTIPWEHAIDTARDL----KNILREKIVVSPLVPVSRGAKGFTYSSERSAA 116

Query: 150 KHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNC 209
           +  A V+ +      + T   A          +          +K     L      +  
Sbjct: 117 EIVAEVLESEKVVSALHTIPAARFANLDEKFDWDVPVCGDDDESKKVVMSLISEIDGLRP 176

Query: 210 ISPFGVATSMLVNA 223
           +    ++ S LV +
Sbjct: 177 LDAGPLSNSRLVES 190

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.6 bits (104), Expect = 6e-06
 Identities = 27/197 (13%), Positives = 49/197 (24%), Gaps = 22/197 (11%)

Query: 32  KVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSV-LASTLAPAPVTFVHCDVSLE 90
            VA+ITG     G          G +V       +  +      L   P   +  ++ L 
Sbjct: 2   NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLH 61

Query: 91  E-DIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGI 149
             D+ +             I+             +S +    D  +    V+  G    +
Sbjct: 62  YGDLTDSTCLV-------KIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLL 114

Query: 150 KHAARVMINRGGGCI-ISTASVAGVMGG--------LGPH-AYTASKHAIVGLTKNAACE 199
                  +         ST+ + G +            P   Y A+K     +  N    
Sbjct: 115 DAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFR-- 172

Query: 200 LGRYGIRVNCISPFGVA 216
              Y +       F   
Sbjct: 173 -EAYNLFAVNGILFNHE 188

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score = 44.0 bits (103), Expect = 1e-05
 Identities = 31/208 (14%), Positives = 55/208 (26%), Gaps = 47/208 (22%)

Query: 32  KVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSV-------LASTLAPAPVTFVH 84
           KVA+ITG     G          G +V       +  +                     +
Sbjct: 2   KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHY 61

Query: 85  CDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKG 144
            D+S   ++  ++        + D +YN   +       +S              V+  G
Sbjct: 62  GDLSDTSNLTRILREV-----QPDEVYNLGAMSHVAVSFESPEYT--------ADVDAMG 108

Query: 145 M--------ALGIKHAARVMINRGGGCIISTASVAGVMGG--------LGPH-AYTASKH 187
                     LG++   R           ST+ + G++            P   Y  +K 
Sbjct: 109 TLRLLEAIRFLGLEKKTRFY-------QASTSELYGLVQEIPQKETTPFYPRSPYAVAKL 161

Query: 188 AIVGLTKNAACELGRYGIRVNCISPFGV 215
               +T N       YG+       F  
Sbjct: 162 YAYWITVNYR---ESYGMYACNGILFNH 186

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 41.7 bits (97), Expect = 6e-05
 Identities = 36/210 (17%), Positives = 63/210 (30%), Gaps = 45/210 (21%)

Query: 35  IITGGARGIGEAAVRLFARHGAKVVIA-DVEDTLGSV--LASTLAPAPVTFVHCDVSLEE 91
           +ITGGA  IG A VR   ++    V+  D     G++  L+         F H D+    
Sbjct: 4   LITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSA 63

Query: 92  DIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKG----MAL 147
           +I  +         + D + + A      R       F        +  N+ G    + +
Sbjct: 64  EITRIFEQ-----YQPDAVMHLAAESHVDRSITGPAAF--------IETNIVGTYALLEV 110

Query: 148 GIKHAARVMINRGGGCIISTASVAGVMGGLGPH----------------------AYTAS 185
             K+ + +  ++         S   V G L                          Y+AS
Sbjct: 111 ARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSAS 170

Query: 186 KHAIVGLTKNAACELGRYGIRVNCISPFGV 215
           K +   L +        YG+     +    
Sbjct: 171 KASSDHLVRAWR---RTYGLPTIVTNCSNN 197

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 40.4 bits (93), Expect = 2e-04
 Identities = 29/194 (14%), Positives = 60/194 (30%), Gaps = 12/194 (6%)

Query: 32  KVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAP---VTFVHCDVS 88
           K+ ++TGGA  IG   V     +G   V+AD          + L       + F   D+ 
Sbjct: 2   KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLC 61

Query: 89  LEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALG 148
             + +E +         ++D + + AG+       +  + +  +     + +        
Sbjct: 62  DRKGLEKVFKE-----YKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYN 116

Query: 149 IKH--AARVMINRGGGCIISTASVAGVMGGLGPH-AYTASKHAIVGLTKNAACELGRYGI 205
           +     +      G                LGP   Y  +K+AI  +  N      +   
Sbjct: 117 VSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIENI-LNDLYNSDKKSW 175

Query: 206 RVNCISPFGVATSM 219
           +   +  F    + 
Sbjct: 176 KFAILRYFNPIGAH 189

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

 Score = 40.3 bits (93), Expect = 2e-04
 Identities = 27/184 (14%), Positives = 59/184 (32%), Gaps = 10/184 (5%)

Query: 35  IITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAP---VTFVHCDVSLEE 91
           ++TGG+  IG        ++G  V+I D        +   +        TFV  D+  E 
Sbjct: 4   LVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEA 63

Query: 92  DIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKH 151
            +  +++        +D + + AG+       +  +++  +  +  +R+     A  +K+
Sbjct: 64  LMTEILHDH-----AIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKN 118

Query: 152 AARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCIS 211
                     G       V     G     Y  SK  +  +  +           +  + 
Sbjct: 119 FIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQ--PDWSIALLR 176

Query: 212 PFGV 215
            F  
Sbjct: 177 YFNP 180

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

 Score = 38.7 bits (88), Expect = 6e-04
 Identities = 11/59 (18%), Positives = 18/59 (30%), Gaps = 1/59 (1%)

Query: 31 GKVAIITGGARGIGEAAVRLFARHGAKVVIADV-EDTLGSVLASTLAPAPVTFVHCDVS 88
          GK   +TG     G          GA V    +   T+ S+  +      +     D+ 
Sbjct: 8  GKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIR 66

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

 Score = 37.8 bits (86), Expect = 0.001
 Identities = 17/69 (24%), Positives = 28/69 (40%), Gaps = 3/69 (4%)

Query: 32 KVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSV--LASTLAPAPVTFVHCDVSL 89
          K+ +ITGG   +G          G  +++ D     G+   L    +     FVH D+  
Sbjct: 2  KL-LITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRN 60

Query: 90 EEDIENLIN 98
          + D+  LI 
Sbjct: 61 KNDVTRLIT 69

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 339

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 37.0 bits (84), Expect = 0.002
 Identities = 11/75 (14%), Positives = 23/75 (30%), Gaps = 8/75 (10%)

Query: 32 KVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSV--------LASTLAPAPVTFV 83
          K+A+ITG     G          G +V       +  +             +  A +   
Sbjct: 2  KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLH 61

Query: 84 HCDVSLEEDIENLIN 98
          + D++    +   I+
Sbjct: 62 YADLTDASSLRRWID 76

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

 Score = 37.2 bits (84), Expect = 0.002
 Identities = 12/63 (19%), Positives = 18/63 (28%), Gaps = 2/63 (3%)

Query: 35 IITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIE 94
          +I G    IG        R     V     D     ++  L      FV  D+S+  +  
Sbjct: 4  LILGVNGFIGNHLTERLLREDHYEVYGL--DIGSDAISRFLNHPHFHFVEGDISIHSEWI 61

Query: 95 NLI 97
             
Sbjct: 62 EYH 64

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	305
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	100.0
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	100.0
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	100.0
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	100.0
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	100.0
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	100.0
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	100.0
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	100.0
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	100.0
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	100.0
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	100.0
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	100.0
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	100.0
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	100.0
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	100.0
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	100.0
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	100.0
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	100.0
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	100.0
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	100.0
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	100.0
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	100.0
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	100.0
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	100.0
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	100.0
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	100.0
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	100.0
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	100.0
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	100.0
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	100.0
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	100.0
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	100.0
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	100.0
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	100.0
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	100.0
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	100.0
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	100.0
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	100.0
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	100.0
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	100.0
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	100.0
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	100.0
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	100.0
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	100.0
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	100.0
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	100.0
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	100.0
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	100.0
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	100.0
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	100.0
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	100.0
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	100.0
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	100.0
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	100.0
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	100.0
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	100.0
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	100.0
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	100.0
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	100.0
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	100.0
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	100.0
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	100.0
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	100.0
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.97
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	99.83
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.77
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.76
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.75
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.74
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	99.73
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	99.71
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.71
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	99.7
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.7
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.7
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.69
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	99.69
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.69
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.69
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	99.68
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	99.67
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	99.67
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.66
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	99.64
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.63
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.62
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.6
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.56
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.37
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	99.34
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.31
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.29
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	99.22
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.17
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	99.08
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	98.63
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	97.95
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	97.8
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	97.77
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	97.77
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	97.73
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	97.64
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	97.62
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.59
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	97.57
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	97.56
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.42
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	97.35
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	97.32
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	97.29
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.28
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	97.23
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	97.13
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.07
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	97.07
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	97.02
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	97.01
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	96.99
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	96.88
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	96.88
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	96.84
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	96.81
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	96.8
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	96.8
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	96.79
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.78
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	96.77
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	96.72
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	96.69
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	96.67
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	96.65
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	96.61
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	96.57
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	96.52
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	96.51
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	96.44
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.43
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	96.42
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	96.39
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	96.35
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	96.25
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	96.2
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	96.15
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	96.14
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	95.96
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	95.92
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	95.89
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	95.83
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	95.83
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	95.76
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.76
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	95.73
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	95.72
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	95.69
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	95.64
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	95.61
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	95.6
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	95.51
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	95.49
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	95.47
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	95.46
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	95.32
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	95.31
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	95.25
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	95.24
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	95.14
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	95.05
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	95.02
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	94.89
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	94.87
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	94.87
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	94.85
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	94.82
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	94.81
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	94.69
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	94.67
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	94.46
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	94.4
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	94.3
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	94.24
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	94.17
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	94.15
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	93.9
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	93.84
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	93.76
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	93.67
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	93.54
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	93.53
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	93.51
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	93.35
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	93.31
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	93.3
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	93.02
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	92.77
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	92.7
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	92.68
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	92.66
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	92.6
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	92.39
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	92.38
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	92.19
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	92.14
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	91.99
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	91.98
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	91.95
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	91.92
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	91.54
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	91.45
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	91.38
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	91.37
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	91.26
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	91.2
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	90.97
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	90.96
d2fr1a2	209	Erythromycin synthase, eryAI, 1st ketoreductase mo	90.78
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	90.73
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	90.58
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	90.35
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	89.99
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	89.93
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	89.76
d1byia_	224	Dethiobiotin synthetase {Escherichia coli [TaxId:	89.37
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	89.23
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	89.16
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	89.14
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	88.95
d1wy7a1	201	Hypothetical protein PH1948 {Archaeon Pyrococcus h	88.91
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	88.9
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	88.88
d2b78a2	317	Hypothetical protein SMu776, middle and C-terminal	88.68
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	88.56
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	88.38
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	88.36
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	88.36
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	88.34
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	88.32
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	88.06
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	87.96
d2csua3	163	Acetate-CoA ligase alpha chain, AcdA, domains 2 an	87.76
d2igta1	309	Putative methyltransferase Atu0340 {Agrobacterium	87.29
d2csua1	129	Acetate-CoA ligase alpha chain, AcdA, N-terminal d	86.99
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	86.91
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	86.63
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	86.57
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	86.56
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	86.44
d1g3qa_	237	Cell division regulator MinD {Archaeon Pyrococcus	86.37
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	86.09
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	85.87
d1u0sy_	118	CheY protein {Thermotoga maritima [TaxId: 2336]}	85.56
d1ihua2	279	Arsenite-translocating ATPase ArsA {Escherichia co	85.3
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	84.98
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	84.78
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	84.16
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	84.1
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	83.72
d1hyqa_	232	Cell division regulator MinD {Archaeon Archaeoglob	83.65
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	83.6
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	83.21
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	82.99
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	82.99
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	82.48
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	82.45
d1w4xa2	235	Phenylacetone monooxygenase {Thermobifida fusca [T	82.1
d1gsoa2	105	Glycinamide ribonucleotide synthetase (GAR-syn), N	82.02
d1peya_	119	Sporulation response regulator Spo0F {Bacillus sub	81.94
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	81.89
d1iuka_	136	Hypothetical protein TT1466 {Thermus thermophilus	81.67
d1y0pa2	308	Flavocytochrome c3 (respiratory fumarate reductase	81.65
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	81.56
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	81.41
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	81.25
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	80.85
d1m1na_	477	Nitrogenase iron-molybdenum protein, alpha chain {	80.58
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	80.14
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	80.13
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	80.1

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=100.00  E-value=4.4e-55  Score=380.18  Aligned_cols=253  Identities=36%  Similarity=0.591  Sum_probs=221.3

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc----CCCCeEEEEecCCCHHHHHHHHHHHHHh
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL----APAPVTFVHCDVSLEEDIENLINSTVSR  103 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~----~~~~v~~~~~D~~d~~~i~~~~~~~~~~  103 (305)
                      +|+||++|||||++|||+++|+.|+++|++|++++|+.+..+...+.+    .+.++.++.||++|+++++++++++.++
T Consensus         1 rl~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~   80 (258)
T d1iy8a_           1 RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTER   80 (258)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999887665544333    4567999999999999999999999999


Q ss_pred             cCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccch
Q 021960          104 YGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYT  183 (305)
Q Consensus       104 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~  183 (305)
                      +|+||+||||||.....   .++.+++.++|++.+++|+.++++++|+++|.|++++.|+||++||.++..+.++...|+
T Consensus        81 ~G~iDiLVnnAG~~~~~---~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~  157 (258)
T d1iy8a_          81 FGRIDGFFNNAGIEGKQ---NPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYA  157 (258)
T ss_dssp             HSCCSEEEECCCCCCCC---BCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSSBHHHH
T ss_pred             hCCCCEEEECCcccccC---CchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhccCCCCchHHH
Confidence            99999999999976432   578889999999999999999999999999999999999999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCC
Q 021960          184 ASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGT  263 (305)
Q Consensus       184 ~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (305)
                      ++|+|+.+|+|+||.|++++||+||+|+||+++|+|....+.....+           ..++   ....+..  ..|.+|
T Consensus       158 asKaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~~~~~~~~-----------~~~~---~~~~~~~--~~pl~R  221 (258)
T d1iy8a_         158 AAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPE-----------NPRK---AAEEFIQ--VNPSKR  221 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTT-----------CHHH---HHHHHHT--TCTTCS
T ss_pred             HHHHHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHHHhhcCcc-----------cHHH---HHHHHHh--cCCCCC
Confidence            99999999999999999999999999999999999976654331111           0111   1222222  368899


Q ss_pred             CCCHHHHHHHHHHhccCCCCceeccEEEecCCcccc
Q 021960          264 TLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTS  299 (305)
Q Consensus       264 ~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~  299 (305)
                      +.+|+|+|+.++||+|++++|+|||+|.+|||++..
T Consensus       222 ~~~p~dvA~~v~fL~S~~s~~itG~~i~VDGG~saa  257 (258)
T d1iy8a_         222 YGEAPEIAAVVAFLLSDDASYVNATVVPIDGGQSAA  257 (258)
T ss_dssp             CBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTTTB
T ss_pred             CcCHHHHHHHHHHHhCchhcCCcCceEEcCcchhcc
Confidence            999999999999999999999999999999999863

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=100.00  E-value=6.5e-55  Score=376.92  Aligned_cols=245  Identities=32%  Similarity=0.421  Sum_probs=208.6

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRL  107 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~i  107 (305)
                      +|+||++|||||++|||+++|+.|+++|++|++++|++...........+.++.++.+|++|.++++++++++.+++|+|
T Consensus         2 rL~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~i   81 (247)
T d2ew8a1           2 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRC   81 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence            58999999999999999999999999999999999976543332222345679999999999999999999999999999


Q ss_pred             cEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhHH
Q 021960          108 DILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKH  187 (305)
Q Consensus       108 d~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKa  187 (305)
                      |+||||||....    .++.+++.++|++.+++|+.++++++|.++|.|.+++.|+||++||.++..+.++...|++||+
T Consensus        82 DilVnnAG~~~~----~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKa  157 (247)
T d2ew8a1          82 DILVNNAGIYPL----IPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKA  157 (247)
T ss_dssp             CEEEECCCCCCC----CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSSCHHHHHHHH
T ss_pred             CEEEECCCCCCC----CChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhcccCcccccchhhhc
Confidence            999999998643    6889999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCCH
Q 021960          188 AIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRS  267 (305)
Q Consensus       188 a~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (305)
                      |+.+|+|++|.|++++|||||+|+||+++|+|........                  ..    +.......+.+++.+|
T Consensus       158 al~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~------------------~~----~~~~~~~~~l~r~~~p  215 (247)
T d2ew8a1         158 ANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSA------------------MF----DVLPNMLQAIPRLQVP  215 (247)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECCC----------------------------------------CTTSSSCSCCCT
T ss_pred             cHHHHHHHHHHHhcccCeEEEEEeeCCCCCccccccccch------------------hH----HHHHHHhccCCCCCCH
Confidence            9999999999999999999999999999999965432220                  00    1111113577899999


Q ss_pred             HHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          268 KDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       268 ~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      ||||+.++||+|++++|+|||+|.+|||+++
T Consensus       216 edvA~~v~fL~S~~s~~itG~~i~vDGG~~~  246 (247)
T d2ew8a1         216 LDLTGAAAFLASDDASFITGQTLAVDGGMVR  246 (247)
T ss_dssp             HHHHHHHHHHTSGGGTTCCSCEEEESSSCCC
T ss_pred             HHHHHHHHHHhCchhcCCcCCeEEECCCEec
Confidence            9999999999999999999999999999864

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=4.1e-55  Score=377.19  Aligned_cols=242  Identities=30%  Similarity=0.476  Sum_probs=219.4

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRL  107 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~i  107 (305)
                      +|+||++|||||++|||+++|+.|+++|++|++++|+++..+.+.+++ +.+...+.+|++|+++++++++++.+++|+|
T Consensus         1 dl~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   79 (243)
T d1q7ba_           1 NFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYL-GANGKGLMLNVTDPASIESVLEKIRAEFGEV   79 (243)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH-GGGEEEEECCTTCHHHHHHHHHHHHHHTCSC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh-CCCCcEEEEEecCHHHhhhhhhhhhcccCCc
Confidence            579999999999999999999999999999999999988877776665 3458889999999999999999999999999


Q ss_pred             cEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhHH
Q 021960          108 DILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKH  187 (305)
Q Consensus       108 d~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKa  187 (305)
                      |+||||||....    .++.+++.++|++.+++|+.++++++|+++|.|++++.|+||++||.++..+.++.+.|++||+
T Consensus        80 DilVnnAg~~~~----~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKa  155 (243)
T d1q7ba_          80 DILVNNAGITRD----NLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKA  155 (243)
T ss_dssp             SEEEECCCCCCC----CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHH
T ss_pred             ceehhhhhhccc----cccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcCCCCCCHHHHHHHH
Confidence            999999998654    6788999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCCH
Q 021960          188 AIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRS  267 (305)
Q Consensus       188 a~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (305)
                      |+++|+|++|.|++++|||||+|+||+++|+|.....+                   +..+.   +..  ..|.+|+.+|
T Consensus       156 al~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~-------------------~~~~~---~~~--~~pl~R~~~p  211 (243)
T d1q7ba_         156 GLIGFSKSLAREVASRGITVNVVAPGFIETDMTRALSD-------------------DQRAG---ILA--QVPAGRLGGA  211 (243)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCH-------------------HHHHH---HHT--TCTTSSCBCH
T ss_pred             HHHHHHHHHHHHhCccCeEEEEEecceEechhhhhhhh-------------------hHHHH---HHh--cCCCCCCCCH
Confidence            99999999999999999999999999999999654322                   11111   222  3688999999


Q ss_pred             HHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          268 KDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       268 ~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      ||+|+.+.||+|++++|+|||+|.+|||+++
T Consensus       212 edvA~~v~fL~S~~s~~itGq~i~vdGG~~~  242 (243)
T d1q7ba_         212 QEIANAVAFLASDEAAYITGETLHVNGGMYM  242 (243)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESTTSSC
T ss_pred             HHHHHHHHHHhCchhcCCcCCeEEECCCeEe
Confidence            9999999999999999999999999999875

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=1.5e-54  Score=375.30  Aligned_cols=245  Identities=33%  Similarity=0.468  Sum_probs=217.6

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc---CCCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL---APAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~---~~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      +|+||++|||||++|||+++|+.|+++|++|++++|+++..+...+.+   .+.++.++.+|++|+++++++++++.+++
T Consensus         2 ~l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   81 (251)
T d1vl8a_           2 DLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKF   81 (251)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            689999999999999999999999999999999999877765544333   24568899999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccc-cCCCCCccch
Q 021960          105 GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGV-MGGLGPHAYT  183 (305)
Q Consensus       105 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~-~~~~~~~~Y~  183 (305)
                      |+||+||||||....    .++.+++.++|++.+++|+.++++++|.++|.|.+++.|+||+++|..+. .+.++...|+
T Consensus        82 g~iDiLVnnAG~~~~----~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~~~~~~~~Y~  157 (251)
T d1vl8a_          82 GKLDTVVNAAGINRR----HPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYA  157 (251)
T ss_dssp             SCCCEEEECCCCCCC----CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSSCHHHH
T ss_pred             CCCCEEEECCCCCCC----CChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhccccCccccchH
Confidence            999999999997643    68899999999999999999999999999999999999999999998764 4778889999


Q ss_pred             hhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCC
Q 021960          184 ASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGT  263 (305)
Q Consensus       184 ~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (305)
                      ++|+|+++|+|+||.|++++|||||+|+||+++|+|....+..                 ++..+.+..     ..|.+|
T Consensus       158 asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~~~-----------------~~~~~~~~~-----~~pl~R  215 (251)
T d1vl8a_         158 ASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSD-----------------PEKLDYMLK-----RIPLGR  215 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTC-----------------HHHHHHHHH-----TCTTSS
T ss_pred             HHHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhccCC-----------------HHHHHHHHh-----cCCCCC
Confidence            9999999999999999999999999999999999997665432                 222222222     378899


Q ss_pred             CCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          264 TLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       264 ~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      +.+|||||+.++||+|++++|+|||+|.+|||++.
T Consensus       216 ~~~pedvA~~v~fL~S~~a~~itG~~i~vDGG~ta  250 (251)
T d1vl8a_         216 TGVPEDLKGVAVFLASEEAKYVTGQIIFVDGGWTA  250 (251)
T ss_dssp             CBCGGGGHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CCCHHHHHHHHHHHhCchhCCCcCcEEEeCcCeeC
Confidence            99999999999999999999999999999999985

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=1.3e-54  Score=375.05  Aligned_cols=246  Identities=33%  Similarity=0.477  Sum_probs=215.2

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRL  107 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~i  107 (305)
                      .|+||++|||||++|||+++|+.|+++|++|++++|+++..+..+ ..   ...++.+|++|.++++++++++.+++|+|
T Consensus         2 ~l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~-~~---~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i   77 (248)
T d2d1ya1           2 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAE-AI---GGAFFQVDLEDERERVRFVEEAAYALGRV   77 (248)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHHHHH-HH---TCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-Hc---CCeEEEEeCCCHHHHHHHHHHHHHhcCCC
Confidence            579999999999999999999999999999999999877654433 22   24678999999999999999999999999


Q ss_pred             cEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhHH
Q 021960          108 DILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKH  187 (305)
Q Consensus       108 d~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKa  187 (305)
                      |+||||||....    .++.+.+.++|++.+++|+.++++++|+++|.|++++.|+||++||.++..+.++...|+++|+
T Consensus        78 DiLVnnAG~~~~----~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKa  153 (248)
T d2d1ya1          78 DVLVNNAAIAAP----GSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKG  153 (248)
T ss_dssp             CEEEECCCCCCC----BCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTTBHHHHHHHH
T ss_pred             CeEEEeCcCCCC----CChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccccccccccccchhHHHHH
Confidence            999999998654    6788999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCCH
Q 021960          188 AIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRS  267 (305)
Q Consensus       188 a~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (305)
                      |+++|+|++|.|++++||+||+|+||+++|+|..+.+....+.             ++..+.+   ..  ..|.+|+.+|
T Consensus       154 al~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~-------------~~~~~~~---~~--~~pl~R~~~p  215 (248)
T d2d1ya1         154 GLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDP-------------ERTRRDW---ED--LHALRRLGKP  215 (248)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC---------------------CHHH---HT--TSTTSSCBCH
T ss_pred             HHHHHHHHHHHHhhhhCcEEEEEeeCCCCCchHHHHhhcCCCH-------------HHHHHHH---Hh--cCCCCCCcCH
Confidence            9999999999999999999999999999999976654332111             1111111   11  3688999999


Q ss_pred             HHHHHHHHHhccCCCCceeccEEEecCCcccc
Q 021960          268 KDIAEAALYLASDESRYVSGHNLVVDGGVTTS  299 (305)
Q Consensus       268 ~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~  299 (305)
                      ||+|+.+.||+|++++|+|||+|.+|||++.+
T Consensus       216 edia~~v~fL~S~~s~~itG~~i~vDGG~tas  247 (248)
T d2d1ya1         216 EEVAEAVLFLASEKASFITGAILPVDGGMTAS  247 (248)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESTTGGGB
T ss_pred             HHHHHHHHHHhCchhcCCCCcEEEcCcCcccc
Confidence            99999999999999999999999999999764

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=100.00  E-value=5.1e-54  Score=373.78  Aligned_cols=252  Identities=25%  Similarity=0.357  Sum_probs=222.9

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHh
Q 021960           26 HRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSR  103 (305)
Q Consensus        26 ~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~  103 (305)
                      +.+|+||++|||||++|||+++|+.|+++|++|++++|+++..+...+++  .+.++.++.+|++|+++++++++++.++
T Consensus         3 ~f~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   82 (259)
T d2ae2a_           3 RWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANH   82 (259)
T ss_dssp             TTCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999999987776665554  3456889999999999999999999998


Q ss_pred             cC-CccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccc
Q 021960          104 YG-RLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAY  182 (305)
Q Consensus       104 ~g-~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y  182 (305)
                      ++ ++|+||||||....    .++.+.+.++|++.+++|+.++++++|.++|.|.+++.|+||++||..+..+.++...|
T Consensus        83 ~~~~idilvnnAG~~~~----~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y  158 (259)
T d2ae2a_          83 FHGKLNILVNNAGIVIY----KEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVY  158 (259)
T ss_dssp             TTTCCCEEEECCCCCCC----CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTTCHHH
T ss_pred             hCCCceEEEECCceecc----CccccCCHHHHHHHHhcccceeEEEEeeccchhhhhcccccccccccccccccccccch
Confidence            87 79999999998644    67889999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCC
Q 021960          183 TASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKG  262 (305)
Q Consensus       183 ~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (305)
                      +++|+|+++|+|++|.|++++|||||+|+||+|+|+|.+..+..                 .+..+....+..  ..|.+
T Consensus       159 ~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~-----------------~~~~~~~~~~~~--~~pl~  219 (259)
T d2ae2a_         159 GATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQD-----------------PEQKENLNKLID--RCALR  219 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTS-----------------HHHHHHHHHHHH--TSTTC
T ss_pred             HHHHHHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhhhc-----------------hhhHHHHHHHHh--cCCCC
Confidence            99999999999999999999999999999999999997655432                 111112222222  37899


Q ss_pred             CCCCHHHHHHHHHHhccCCCCceeccEEEecCCccccc
Q 021960          263 TTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTSR  300 (305)
Q Consensus       263 ~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~~  300 (305)
                      |+.+|||||+.++||+|++++|+|||+|.+|||++...
T Consensus       220 R~g~pedvA~~v~fL~S~~s~~itG~~i~VDGG~~a~~  257 (259)
T d2ae2a_         220 RMGEPKELAAMVAFLCFPAASYVTGQIIYVDGGLMANC  257 (259)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCS
T ss_pred             CCcCHHHHHHHHHHHhCchhCCCcCcEEEECCCeEeeC
Confidence            99999999999999999999999999999999998754

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=100.00  E-value=4.8e-54  Score=374.09  Aligned_cols=251  Identities=29%  Similarity=0.415  Sum_probs=218.8

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcc-hhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHH
Q 021960           26 HRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDT-LGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVS  102 (305)
Q Consensus        26 ~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~-~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~  102 (305)
                      ..+|+||++|||||++|||+++|+.|+++|++|++++|+.+ ..+.+.+.+  .+.++..+.+|++|+++++++++++.+
T Consensus         2 ~~dL~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (261)
T d1geea_           2 YKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIK   81 (261)
T ss_dssp             CGGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            34789999999999999999999999999999999999754 333333333  355788999999999999999999999


Q ss_pred             hcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCC-EEEEecccccccCCCCCcc
Q 021960          103 RYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGG-CIISTASVAGVMGGLGPHA  181 (305)
Q Consensus       103 ~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~-~iv~isS~~~~~~~~~~~~  181 (305)
                      ++|+||+||||||....    .++.+++.++|++.+++|+.++++++|.++|.|.+++.+ +||++||.++..+.++...
T Consensus        82 ~~G~iDiLVnnAG~~~~----~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~~~~~~~  157 (261)
T d1geea_          82 EFGKLDVMINNAGLENP----VSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVH  157 (261)
T ss_dssp             HHSCCCEEEECCCCCCC----CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHH
T ss_pred             HhCCCCEeeccceecCC----cchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcccCccccc
Confidence            99999999999998654    678899999999999999999999999999999877654 6889999999999999999


Q ss_pred             chhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCC
Q 021960          182 YTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLK  261 (305)
Q Consensus       182 Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (305)
                      |+++|+|+.+|+|+||.|++++||+||+|+||+++|+|..+.+..                 ++..+.+.   .  ..|.
T Consensus       158 Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~-----------------~~~~~~~~---~--~~pl  215 (261)
T d1geea_         158 YAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFAD-----------------PEQRADVE---S--MIPM  215 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHS-----------------HHHHHHHH---T--TCTT
T ss_pred             cccCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhhhcCC-----------------HHHHHHHH---h--cCCC
Confidence            999999999999999999999999999999999999997654332                 12222222   1  3688


Q ss_pred             CCCCCHHHHHHHHHHhccCCCCceeccEEEecCCccccccc
Q 021960          262 GTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTSRNC  302 (305)
Q Consensus       262 ~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~~~~  302 (305)
                      +|+.+|||||+.++||+|++++|+|||+|.+|||+++.-+.
T Consensus       216 ~R~~~pediA~~v~fL~S~~s~~itG~~i~vDGG~sl~p~~  256 (261)
T d1geea_         216 GYIGEPEEIAAVAAWLASSEASYVTGITLFADGGMTLYPSF  256 (261)
T ss_dssp             SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCGGG
T ss_pred             CCCCCHHHHHHHHHHHhCchhcCCcCCeEEECCCeeCCCCC
Confidence            99999999999999999999999999999999999986443

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=3.8e-54  Score=370.83  Aligned_cols=238  Identities=39%  Similarity=0.635  Sum_probs=217.9

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRL  107 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~i  107 (305)
                      +|+||++|||||++|||+++|+.|+++|++|++++|+++..+.+.+++. .++.++.+|++|+++++++++++.+++|++
T Consensus         3 ~L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   81 (244)
T d1nffa_           3 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELA-DAARYVHLDVTQPAQWKAAVDTAVTAFGGL   81 (244)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTG-GGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh-CcceEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            6899999999999999999999999999999999999887777666653 458899999999999999999999999999


Q ss_pred             cEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhHH
Q 021960          108 DILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKH  187 (305)
Q Consensus       108 d~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKa  187 (305)
                      |+||||||....    .++.+++.++|++.+++|+.++++++|.++|.|.+++.|+||++||..+..+.++...|+++|+
T Consensus        82 dilinnAG~~~~----~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKa  157 (244)
T d1nffa_          82 HVLVNNAGILNI----GTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKF  157 (244)
T ss_dssp             CEEEECCCCCCC----BCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred             eEEEECCcccCC----CchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEeccccccccccccccchhhHHH
Confidence            999999998644    6788999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCCH
Q 021960          188 AIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRS  267 (305)
Q Consensus       188 a~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (305)
                      ++++|+|++|.|++++||+||+|+||+++|+|.....+.                             ....|.+++++|
T Consensus       158 al~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~-----------------------------~~~~pl~R~~~p  208 (244)
T d1nffa_         158 AVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWVPED-----------------------------IFQTALGRAAEP  208 (244)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTSCTT-----------------------------CSCCSSSSCBCH
T ss_pred             HHHHHHHHHHHHhcccCEEEEEEeeCCccChhHhhhhHH-----------------------------HHhccccCCCCH
Confidence            999999999999999999999999999999996432111                             013678999999


Q ss_pred             HHHHHHHHHhccCCCCceeccEEEecCCcccc
Q 021960          268 KDIAEAALYLASDESRYVSGHNLVVDGGVTTS  299 (305)
Q Consensus       268 ~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~  299 (305)
                      +|+|+.++||+|++++|+|||+|.+|||++..
T Consensus       209 ~diA~~v~fL~s~~s~~itG~~i~vDGG~~ag  240 (244)
T d1nffa_         209 VEVSNLVVYLASDESSYSTGAEFVVDGGTVAG  240 (244)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESTTGGGS
T ss_pred             HHHHHHHHHHhChhhCCCcCCEEEECCCeecc
Confidence            99999999999999999999999999999764

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=100.00  E-value=3.3e-54  Score=374.49  Aligned_cols=255  Identities=32%  Similarity=0.462  Sum_probs=221.5

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCC
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGR  106 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~  106 (305)
                      ++|+||++|||||++|||+++|+.|+++|++|++++|+.+..+.+.+++ +.++.++.+|++|+++++++++++.+++|+
T Consensus         1 M~L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~-~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~   79 (256)
T d1k2wa_           1 MRLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEI-GPAACAIALDVTDQASIDRCVAELLDRWGS   79 (256)
T ss_dssp             CTTTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHH-CTTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-CCceEEEEeeCCCHHHHHHHHHHHHHHhCC
Confidence            3589999999999999999999999999999999999988777776666 456889999999999999999999999999


Q ss_pred             ccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC-CCCEEEEecccccccCCCCCccchhh
Q 021960          107 LDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINR-GGGCIISTASVAGVMGGLGPHAYTAS  185 (305)
Q Consensus       107 id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~isS~~~~~~~~~~~~Y~~s  185 (305)
                      ||+||||||....    .++.+++.++|++.+++|+.++++++|.++|.|.++ ..|+||++||.++..+.++...|+++
T Consensus        80 iDilVnnAg~~~~----~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~as  155 (256)
T d1k2wa_          80 IDILVNNAALFDL----APIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGEALVGVYCAT  155 (256)
T ss_dssp             CCEEEECCCCCCC----CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             ccEEEeecccccc----cccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhccccccccchhhh
Confidence            9999999998644    678899999999999999999999999999986654 56999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCC
Q 021960          186 KHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL  265 (305)
Q Consensus       186 Kaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (305)
                      |+|+++|+|++|.|++++|||||+|+||+++|+|.......        .......+.++..+.+..     ..|.+|+.
T Consensus       156 Kaal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~~~~~~~~--------~~~~~~~~~~~~~~~~~~-----~~PlgR~~  222 (256)
T d1k2wa_         156 KAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEHWDGVDAK--------FADYENLPRGEKKRQVGA-----AVPFGRMG  222 (256)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTHHHHHHH--------HHHHHTCCTTHHHHHHHH-----HSTTSSCB
T ss_pred             hhHHHHHHHHHHHHhcccCeEEEEEecCCCCchhhhhhhhh--------hhhhccCChHHHHHHHHh-----cCCCCCCc
Confidence            99999999999999999999999999999999996544321        011112222333333322     36889999


Q ss_pred             CHHHHHHHHHHhccCCCCceeccEEEecCCcccc
Q 021960          266 RSKDIAEAALYLASDESRYVSGHNLVVDGGVTTS  299 (305)
Q Consensus       266 ~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~  299 (305)
                      +|+|||+.++||+|++++|+|||+|.+|||.+++
T Consensus       223 ~p~evA~~v~fL~S~~a~~iTG~~i~vDGG~~ms  256 (256)
T d1k2wa_         223 RAEDLTGMAIFLATPEADYIVAQTYNVDGGNWMS  256 (256)
T ss_dssp             CHHHHHHHHHHTTSGGGTTCCSCEEEESTTSSCC
T ss_pred             CHHHHHHHHHHHhCchhCCccCceEEECcchhhC
Confidence            9999999999999999999999999999998753

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=100.00  E-value=3e-54  Score=375.72  Aligned_cols=254  Identities=31%  Similarity=0.463  Sum_probs=209.9

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcc-hhhhHhhhc---CCCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           29 LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDT-LGSVLASTL---APAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        29 l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~-~~~~~~~~~---~~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      |+||++|||||++|||+++|+.|+++|++|++++|++. ..+.+.+.+   .+.++.++.+|++|.++++++++++.+++
T Consensus         2 L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   81 (260)
T d1x1ta1           2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            68999999999999999999999999999999999753 333333222   35679999999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchh
Q 021960          105 GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTA  184 (305)
Q Consensus       105 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~  184 (305)
                      |+||+||||||....    .++.+.+.++|++.+++|+.++++++|+++|.|++++.|+||++||.++..+.++...|++
T Consensus        82 G~iDiLVnnAG~~~~----~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~a  157 (260)
T d1x1ta1          82 GRIDILVNNAGIQHT----ALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVA  157 (260)
T ss_dssp             SCCSEEEECCCCCCC----CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHH
T ss_pred             CCCcEEEeecccccC----CchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccceeccCCcchhhh
Confidence            999999999998654    6788999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCC
Q 021960          185 SKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT  264 (305)
Q Consensus       185 sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (305)
                      +|+|+.+|+|++|.|++++||+||+|+||+++|+|....+......        .+...++..   .+.... ..|.+|+
T Consensus       158 sKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~--------~~~~~~~~~---~~~~~~-~~Pl~R~  225 (260)
T d1x1ta1         158 AKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEK--------NGVDQETAA---RELLSE-KQPSLQF  225 (260)
T ss_dssp             HHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC-----------------------------------CHHH-HCTTCCC
T ss_pred             hhhhHHHhHHHHHHHhchhCcEEEEEecCCCCChhhhhhhhhhhhh--------cCCChHHHH---HHHHHh-cCCCCCC
Confidence            9999999999999999999999999999999999976654432111        011111111   111111 3688999


Q ss_pred             CCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          265 LRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       265 ~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      .+|+|+|+.++||||++++|+|||+|.+|||++.
T Consensus       226 g~pediA~~v~fL~S~~a~~itG~~i~vDGG~ta  259 (260)
T d1x1ta1         226 VTPEQLGGTAVFLASDAAAQITGTTVSVDGGWTA  259 (260)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             cCHHHHHHHHHHHhChhhCCCcCCEEEECcchhc
Confidence            9999999999999999999999999999999874

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=3.7e-54  Score=373.02  Aligned_cols=243  Identities=29%  Similarity=0.447  Sum_probs=215.6

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      ..|+||++|||||++|||+++|+.|+++|++|++++|+++..+.+.+++  .+.++.++.+|++|+++++++++++.+++
T Consensus         6 f~lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~   85 (251)
T d2c07a1           6 YCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEH   85 (251)
T ss_dssp             CCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhc
Confidence            4678999999999999999999999999999999999988776665554  34578999999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchh
Q 021960          105 GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTA  184 (305)
Q Consensus       105 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~  184 (305)
                      |+||+||||||....    .++.+.+.++|++.+++|+.++++++|+++|.|++++.|+||++||.++..+.++...|++
T Consensus        86 g~iDilvnnag~~~~----~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~~~Y~a  161 (251)
T d2c07a1          86 KNVDILVNNAGITRD----NLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSS  161 (251)
T ss_dssp             SCCCEEEECCCCCCC----CCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHH
T ss_pred             CCceeeeeccccccc----cccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcCCCCCCHHHHH
Confidence            999999999998654    6778899999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCC
Q 021960          185 SKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT  264 (305)
Q Consensus       185 sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (305)
                      ||+|+++|+|+||.|++++|||||+|+||+++|+|.....                   ++..+.+.   .  ..|.+|+
T Consensus       162 sKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~~~-------------------~~~~~~~~---~--~~pl~R~  217 (251)
T d2c07a1         162 SKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKIS-------------------EQIKKNII---S--NIPAGRM  217 (251)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CC-------------------HHHHHHHH---T--TCTTSSC
T ss_pred             HHHHHHHHHHHHHHHhhhhCeEEEEEccCCEecccccccC-------------------HHHHHHHH---h--cCCCCCC
Confidence            9999999999999999999999999999999999864321                   12222222   2  3788999


Q ss_pred             CCHHHHHHHHHHhccCCCCceeccEEEecCCcc
Q 021960          265 LRSKDIAEAALYLASDESRYVSGHNLVVDGGVT  297 (305)
Q Consensus       265 ~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~  297 (305)
                      .+|+|+|+.+.||+|++++|+|||+|.+|||++
T Consensus       218 ~~pedvA~~v~fL~S~~s~~itG~~i~vDGG~s  250 (251)
T d2c07a1         218 GTPEEVANLACFLSSDKSGYINGRVFVIDGGLS  250 (251)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSC
T ss_pred             cCHHHHHHHHHHHhCchhCCCcCcEEEECCCcC
Confidence            999999999999999999999999999999986

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=100.00  E-value=3.6e-54  Score=374.62  Aligned_cols=251  Identities=29%  Similarity=0.437  Sum_probs=219.9

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRYGRL  107 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~i  107 (305)
                      .||++|||||++|||+++|+.|+++|++|++++|+++..+...+++  .+.++.++.+|++|+++++++++++.+++|+|
T Consensus         1 DgKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~i   80 (257)
T d2rhca1           1 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPV   80 (257)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            4899999999999999999999999999999999987766665544  35579999999999999999999999999999


Q ss_pred             cEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHH--HHcCCCCEEEEecccccccCCCCCccchhh
Q 021960          108 DILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARV--MINRGGGCIISTASVAGVMGGLGPHAYTAS  185 (305)
Q Consensus       108 d~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  185 (305)
                      |+||||||....    .++.+++.++|++.+++|+.++++++|+++|+  |.+++.++||++||..+..+.++...|+++
T Consensus        81 DilVnnAG~~~~----~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~~~~~~~Y~as  156 (257)
T d2rhca1          81 DVLVNNAGRPGG----GATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSAS  156 (257)
T ss_dssp             SEEEECCCCCCC----SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             CEEEecccccCC----CChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCcccccccccccccccccchhHHHH
Confidence            999999998644    67889999999999999999999999999997  566777999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCC
Q 021960          186 KHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL  265 (305)
Q Consensus       186 Kaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (305)
                      |+|+.+|+|+||.|++++|||||+|+||+++|+|.......        .........++..+.+..     ..|.+|+.
T Consensus       157 Kaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~--------~~~~~~~~~~e~~~~~~~-----~~PlgR~~  223 (257)
T d2rhca1         157 KHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREH--------YSDIWEVSTEEAFDRITA-----RVPIGRYV  223 (257)
T ss_dssp             HHHHHHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHH--------HHHHTTCCHHHHHHHHHT-----TSTTSSCB
T ss_pred             HHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhh--------hhhhcccChHHHHHHHHh-----cCCCCCCc
Confidence            99999999999999999999999999999999997654322        111222333444333332     47899999


Q ss_pred             CHHHHHHHHHHhccCCCCceeccEEEecCCcc
Q 021960          266 RSKDIAEAALYLASDESRYVSGHNLVVDGGVT  297 (305)
Q Consensus       266 ~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~  297 (305)
                      +|||+|+.++||||++++|+|||+|.+|||++
T Consensus       224 ~pedia~~v~fL~S~~s~~itG~~i~vDGG~~  255 (257)
T d2rhca1         224 QPSEVAEMVAYLIGPGAAAVTAQALNVCGGLG  255 (257)
T ss_dssp             CHHHHHHHHHHHTSGGGTTCCSCEEEESTTCC
T ss_pred             CHHHHHHHHHHHhCchhcCCcCceEEECcCcc
Confidence            99999999999999999999999999999985

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=6.4e-54  Score=372.21  Aligned_cols=245  Identities=33%  Similarity=0.464  Sum_probs=218.6

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHh
Q 021960           26 HRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSR  103 (305)
Q Consensus        26 ~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~  103 (305)
                      .++|+||++|||||++|||+++|+.|+++|++|++++|+++..+.+.+++  .+.++.++.+|++|+++++++++++.++
T Consensus         6 ~m~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~   85 (255)
T d1fmca_           6 NLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISK   85 (255)
T ss_dssp             GGCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999999887766665544  3557899999999999999999999999


Q ss_pred             cCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccch
Q 021960          104 YGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYT  183 (305)
Q Consensus       104 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~  183 (305)
                      +|+||+||||||....    .++ +.+.++|++.+++|+.++++++|.++|.|.+++.++||++||.++..+.++...|+
T Consensus        86 ~g~iDilvnnAG~~~~----~~~-e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~~~~~~~~Y~  160 (255)
T d1fmca_          86 LGKVDILVNNAGGGGP----KPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYA  160 (255)
T ss_dssp             HSSCCEEEECCCCCCC----CCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHH
T ss_pred             cCCCCEeeeCCcCCCC----Ccc-cCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhccccccccch
Confidence            9999999999997643    333 78999999999999999999999999999999999999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCC
Q 021960          184 ASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGT  263 (305)
Q Consensus       184 ~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (305)
                      ++|+|+.+|+|++|.|++++||+||+|+||+++|+|..+.+..                  +..+.+..     ..|.+|
T Consensus       161 asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~------------------e~~~~~~~-----~~pl~R  217 (255)
T d1fmca_         161 SSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITP------------------EIEQKMLQ-----HTPIRR  217 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCH------------------HHHHHHHH-----TCSSCS
T ss_pred             hHHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhhccCCH------------------HHHHHHHh-----cCCCCC
Confidence            9999999999999999999999999999999999996554321                  22222222     378999


Q ss_pred             CCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          264 TLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       264 ~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      +.+|||||+.+.||+|++++|+|||+|.+|||+..
T Consensus       218 ~g~pedvA~~v~fL~S~~s~~itG~~i~vDGG~~~  252 (255)
T d1fmca_         218 LGQPQDIANAALFLCSPAASWVSGQILTVSGGGVQ  252 (255)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSCC
T ss_pred             CcCHHHHHHHHHHHhCchhcCCcCCEEEECcCccc
Confidence            99999999999999999999999999999999854

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=100.00  E-value=7.2e-54  Score=371.25  Aligned_cols=243  Identities=38%  Similarity=0.541  Sum_probs=219.2

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRL  107 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~i  107 (305)
                      +|+||++|||||++|||+++|+.|+++|++|++++|+++..+...+++ +.++.++.+|++|+++++++++++.+++|+|
T Consensus         2 dL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   80 (254)
T d1hdca_           2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL-GDAARYQHLDVTIEEDWQRVVAYAREEFGSV   80 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-GGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-CCceEEEEcccCCHHHHHHHHHHHHHHcCCc
Confidence            689999999999999999999999999999999999988777666655 4568999999999999999999999999999


Q ss_pred             cEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhHH
Q 021960          108 DILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKH  187 (305)
Q Consensus       108 d~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKa  187 (305)
                      |+||||||....    .++.+.+.++|++.+++|+.++++++|.++|.|++++.|+||++||.++..+.++...|+++|+
T Consensus        81 DilVnnAg~~~~----~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKa  156 (254)
T d1hdca_          81 DGLVNNAGISTG----MFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKW  156 (254)
T ss_dssp             CEEEECCCCCCC----SCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             cEEEecCccccc----cccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhcccccchhhHHHHHH
Confidence            999999998644    6788999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCC-C
Q 021960          188 AIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL-R  266 (305)
Q Consensus       188 a~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  266 (305)
                      |+.+|+|+||.|++++|||||+|+||+++|+|..+........                      ..  -..|.+|+. .
T Consensus       157 al~~lt~~lA~e~a~~gIrVN~I~PG~v~T~~~~~~~~~~~~~----------------------~~--~~~pl~R~g~~  212 (254)
T d1hdca_         157 GVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQGEG----------------------NY--PNTPMGRVGNE  212 (254)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTCCCSTT----------------------SC--TTSTTSSCB-C
T ss_pred             HHHHHHHHHHHHhCCCceEEEEeeeCcccCccchhcCHHHHHH----------------------HH--hCCCCCCCCCC
Confidence            9999999999999999999999999999999976653331111                      00  035778887 6


Q ss_pred             HHHHHHHHHHhccCCCCceeccEEEecCCcccc
Q 021960          267 SKDIAEAALYLASDESRYVSGHNLVVDGGVTTS  299 (305)
Q Consensus       267 ~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~  299 (305)
                      |||||+.++||+|++++|+|||+|.+|||++..
T Consensus       213 PedvA~~v~fL~S~~a~~itG~~i~vDGG~t~g  245 (254)
T d1hdca_         213 PGEIAGAVVKLLSDTSSYVTGAELAVDGGWTTG  245 (254)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTTTTTS
T ss_pred             HHHHHHHHHHHhchhhCCCCCceEEeCCCccCC
Confidence            999999999999999999999999999999763

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-53  Score=369.46  Aligned_cols=247  Identities=33%  Similarity=0.531  Sum_probs=216.8

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCC
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGR  106 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~  106 (305)
                      .+|+||++|||||++|||+++|+.|+++|++|++++|+++..+.+.++..  ++.++.||++|.++++++++++.+++|+
T Consensus         2 ~rl~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~--~~~~~~~Dvs~~~~v~~~~~~~~~~~g~   79 (250)
T d1ydea1           2 TRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELP--GAVFILCDVTQEDDVKTLVSETIRRFGR   79 (250)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCT--TEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcC--CCeEEEccCCCHHHHHHHHHHHHHhcCC
Confidence            36899999999999999999999999999999999999888777766653  4788999999999999999999999999


Q ss_pred             ccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhH
Q 021960          107 LDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASK  186 (305)
Q Consensus       107 id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  186 (305)
                      ||+||||||.....   .++++++.++|++.+++|+.++++++|.++|.|+++ +|+||++||.++..+.++...|+++|
T Consensus        80 iDilVnnAG~~~~~---~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~-~G~Ii~isS~~~~~~~~~~~~Y~asK  155 (250)
T d1ydea1          80 LDCVVNNAGHHPPP---QRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS-QGNVINISSLVGAIGQAQAVPYVATK  155 (250)
T ss_dssp             CCEEEECCCCCCCC---CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCHHHHHCCTTCHHHHHHH
T ss_pred             CCEEEecccccccc---cccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhC-CCCCcccccccccccccCcchhHHHH
Confidence            99999999975432   567889999999999999999999999999999765 58999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCC
Q 021960          187 HAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLR  266 (305)
Q Consensus       187 aa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (305)
                      +|+.+|+|+||.|++++|||||+|+||+|+|+|..+......+                ..+.+.+...  ..|.+|+.+
T Consensus       156 aal~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~~~~~----------------~~~~~~~~~~--~~pl~R~g~  217 (250)
T d1ydea1         156 GAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPD----------------PRASIREGML--AQPLGRMGQ  217 (250)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSS----------------HHHHHHHHHH--TSTTSSCBC
T ss_pred             hhHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHHhhcCCC----------------HHHHHHHHHh--cCCCCCCCC
Confidence            9999999999999999999999999999999997655332111                1112222222  368899999


Q ss_pred             HHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          267 SKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       267 ~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      |||+|+.+.||+|+ ++|+|||+|.+|||+++
T Consensus       218 p~eva~~v~fL~Sd-a~~itG~~i~vDGG~~l  248 (250)
T d1ydea1         218 PAEVGAAAVFLASE-ANFCTGIELLVTGGAEL  248 (250)
T ss_dssp             HHHHHHHHHHHHHH-CTTCCSCEEEESTTTTS
T ss_pred             HHHHHHHHHHHhCc-cCCCcCCeEEECCCccc
Confidence            99999999999997 78999999999999876

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=100.00  E-value=3.9e-53  Score=370.28  Aligned_cols=253  Identities=50%  Similarity=0.829  Sum_probs=220.6

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcC-CCCeEEEEecCCCHHHHHHHHHHHHHhcCC
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLA-PAPVTFVHCDVSLEEDIENLINSTVSRYGR  106 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~-~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~  106 (305)
                      +|+||++|||||++|||+++|+.|+++|++|++++|++...+...+++. ..++.++.||++|+++++++++++.+++|+
T Consensus         3 rL~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (268)
T d2bgka1           3 RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGK   82 (268)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            6899999999999999999999999999999999999888777666653 456888999999999999999999999999


Q ss_pred             ccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCC-ccchhh
Q 021960          107 LDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGP-HAYTAS  185 (305)
Q Consensus       107 id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~-~~Y~~s  185 (305)
                      +|+||||||.....  ...+.+.+.++|++.+++|+.++++++|.++|.|.+++.|+||++||.++..+.++. ..|+++
T Consensus        83 iD~lVnnAG~~~~~--~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~~Y~as  160 (268)
T d2bgka1          83 LDIMFGNVGVLSTT--PYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTAT  160 (268)
T ss_dssp             CCEEEECCCCCCSS--CSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTTSCHHHHHH
T ss_pred             cceeccccccccCC--CcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCccccccccccccccccccccchh
Confidence            99999999976542  135778899999999999999999999999999999999999999999998876654 489999


Q ss_pred             HHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCC
Q 021960          186 KHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL  265 (305)
Q Consensus       186 Kaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (305)
                      |+|+++|+|++|.|++++|||||+|+||+++|+|..+.+...                .+.   ..........+.++++
T Consensus       161 Kaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~----------------~~~---~~~~~~~~~~~~gr~~  221 (268)
T d2bgka1         161 KHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVD----------------SSR---VEELAHQAANLKGTLL  221 (268)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCC----------------HHH---HHHHHHHTCSSCSCCC
T ss_pred             HHHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhhcCC----------------HHH---HHHHHHhccccCCCCc
Confidence            999999999999999999999999999999999976654320                111   1112222245788999


Q ss_pred             CHHHHHHHHHHhccCCCCceeccEEEecCCcccccc
Q 021960          266 RSKDIAEAALYLASDESRYVSGHNLVVDGGVTTSRN  301 (305)
Q Consensus       266 ~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~~~  301 (305)
                      +|||||+.++||+|++++|+|||+|.+|||+++..+
T Consensus       222 ~pedvA~~v~fL~S~~s~~itGq~i~VDGG~t~~~p  257 (268)
T d2bgka1         222 RAEDVADAVAYLAGDESKYVSGLNLVIDGGYTRTNP  257 (268)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCCT
T ss_pred             CHHHHHHHHHHHhChhhCCccCceEEECcCcccCCC
Confidence            999999999999999999999999999999988765

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=100.00  E-value=1.4e-53  Score=369.41  Aligned_cols=244  Identities=35%  Similarity=0.525  Sum_probs=217.0

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc-CCCCeEEEEecCCCHHHHHHHHHHHHHhcCC
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL-APAPVTFVHCDVSLEEDIENLINSTVSRYGR  106 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~-~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~  106 (305)
                      +|+||++|||||++|||+++|+.|+++|++|++++|+.+..+.+.+.+ .+.++.++.+|++|+++++++++++.+++|+
T Consensus         3 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~   82 (251)
T d1zk4a1           3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGP   82 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            589999999999999999999999999999999999987777666555 3457999999999999999999999999999


Q ss_pred             ccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCC-CEEEEecccccccCCCCCccchhh
Q 021960          107 LDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGG-GCIISTASVAGVMGGLGPHAYTAS  185 (305)
Q Consensus       107 id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~iv~isS~~~~~~~~~~~~Y~~s  185 (305)
                      ||+||||||....    .++.+++.++|++.+++|+.+++++++.++|.|.+++. ++||++||..+..+.++...|+++
T Consensus        83 iDiLVnnAg~~~~----~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~~~~~~~Y~as  158 (251)
T d1zk4a1          83 VSTLVNNAGIAVN----KSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNAS  158 (251)
T ss_dssp             CCEEEECCCCCCC----CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             ceEEEeccccccc----cchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceeccCCCchhHHHH
Confidence            9999999998754    67889999999999999999999999999999988875 489999999999999999999999


Q ss_pred             HHHHHHHHHHHHHH--HCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCC
Q 021960          186 KHAIVGLTKNAACE--LGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGT  263 (305)
Q Consensus       186 Kaa~~~~~~~la~e--~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (305)
                      |+|+.+|+|++|.|  ++++||+||+|+||+++|+|.......                  +....   .  .-..|.+|
T Consensus       159 Kaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~~~~------------------~~~~~---~--~~~~pl~R  215 (251)
T d1zk4a1         159 KGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGA------------------EEAMS---Q--RTKTPMGH  215 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTH------------------HHHHT---S--TTTCTTSS
T ss_pred             HHHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhcCCH------------------HHHHH---H--HhCCCCCC
Confidence            99999999999998  568999999999999999996543211                  11111   1  11368899


Q ss_pred             CCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          264 TLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       264 ~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      +++|||||+.++||+|++++|+|||+|.+|||++.
T Consensus       216 ~~~pedvA~~v~fL~S~~s~~itG~~i~vDGG~ta  250 (251)
T d1zk4a1         216 IGEPNDIAYICVYLASNESKFATGSEFVVDGGYTA  250 (251)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CcCHHHHHHHHHHHhCchhCCCcCcEEEECccccc
Confidence            99999999999999999999999999999999874

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=7.1e-54  Score=372.76  Aligned_cols=246  Identities=29%  Similarity=0.441  Sum_probs=193.8

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      .+|+||++|||||++|||+++|+.|+++|++|++++|++...+...+.+  .+.++.++.||++|.++++++++++.+++
T Consensus         4 F~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   83 (259)
T d1xq1a_           4 WSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMF   83 (259)
T ss_dssp             TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHh
Confidence            4789999999999999999999999999999999999987776665544  34579999999999999999999999998


Q ss_pred             -CCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccch
Q 021960          105 -GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYT  183 (305)
Q Consensus       105 -g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~  183 (305)
                       |++|+||||||....    .++.+.+.++|++.+++|+.++++++|.++|.|++++.|+||++||..+..+.++...|+
T Consensus        84 ~g~idilvnnAG~~~~----~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~  159 (259)
T d1xq1a_          84 GGKLDILINNLGAIRS----KPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYS  159 (259)
T ss_dssp             TTCCSEEEEECCC----------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------CCHHH
T ss_pred             CCCcccccccccccCC----CchhhCCHHHHHHHHHHHhhhheeeehhhhhccccccccccccccccccccccccccccc
Confidence             689999999998754    678899999999999999999999999999999999999999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCC
Q 021960          184 ASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGT  263 (305)
Q Consensus       184 ~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (305)
                      ++|+|+.+|+|++|.|++++|||||+|+||+++|+|....+..                  +..+.+..     ..|.+|
T Consensus       160 asKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~~~~------------------~~~~~~~~-----~~pl~R  216 (259)
T d1xq1a_         160 ATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDD------------------EFKKVVIS-----RKPLGR  216 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC-----------------------------------------------
T ss_pred             ccccchhhhhHHHHHHhcccCeEEEEeccCcccCHHhhhhchH------------------HHHHHHHh-----CCCCCC
Confidence            9999999999999999999999999999999999996554322                  11111111     367899


Q ss_pred             CCCHHHHHHHHHHhccCCCCceeccEEEecCCcccc
Q 021960          264 TLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTS  299 (305)
Q Consensus       264 ~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~  299 (305)
                      +.+|||||+.++||+|++++|+|||+|.+|||+++.
T Consensus       217 ~~~pedvA~~v~fL~S~~s~~iTG~~i~vDGG~s~~  252 (259)
T d1xq1a_         217 FGEPEEVSSLVAFLCMPAASYITGQTICVDGGLTVN  252 (259)
T ss_dssp             -CCGGGGHHHHHHHTSGGGTTCCSCEEECCCCEEET
T ss_pred             CcCHHHHHHHHHHHhCchhcCCcCcEEEeCCCEECC
Confidence            999999999999999999999999999999999875

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=100.00  E-value=9.4e-54  Score=372.42  Aligned_cols=257  Identities=30%  Similarity=0.445  Sum_probs=219.9

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhcC
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRYG  105 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g  105 (305)
                      +|+||++|||||++|||+++|+.|+++|++|++++|+++..+.+.+.+  .+.++..+.||++|+++++++++++.+++|
T Consensus         2 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   81 (260)
T d1zema1           2 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFG   81 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            589999999999999999999999999999999999987776665554  345789999999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhh
Q 021960          106 RLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTAS  185 (305)
Q Consensus       106 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  185 (305)
                      +||+||||||.....   .++.+++.++|++.+++|+.++++++++++|.|.+++.|+||++||.++..+.++...|+++
T Consensus        82 ~iDilVnnaG~~~~~---~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~~~Y~as  158 (260)
T d1zema1          82 KIDFLFNNAGYQGAF---APVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTS  158 (260)
T ss_dssp             CCCEEEECCCCCCCC---BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTTBHHHHHH
T ss_pred             CCCeehhhhcccccc---CccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhccCCcchHHHHHH
Confidence            999999999976442   57889999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCC
Q 021960          186 KHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL  265 (305)
Q Consensus       186 Kaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (305)
                      |+|+.+|+|++|.|++++|||||+|+||+|+|+|.++......   ............++..+.+..     ..|.+|++
T Consensus       159 Kaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~-----~~Pl~R~g  230 (260)
T d1zema1         159 KGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQ---AKVGSQYFSTDPKVVAQQMIG-----SVPMRRYG  230 (260)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHH---HHHTCTTSCSSHHHHHHHHHH-----TSTTSSCB
T ss_pred             HHHHHHHHHHHHHHhhhhCCEEEEeccCcccCcchhhcchhhh---hhhcccccccCHHHHHHHHHh-----cCCCCCCc
Confidence            9999999999999999999999999999999999755432100   000000111111222222222     37899999


Q ss_pred             CHHHHHHHHHHhccCCCCceeccEEEecCC
Q 021960          266 RSKDIAEAALYLASDESRYVSGHNLVVDGG  295 (305)
Q Consensus       266 ~~~dva~~v~~l~s~~~~~~tG~~i~idgG  295 (305)
                      +|||+|+.++||+|++++|+|||+|.+|||
T Consensus       231 ~pedvA~~v~fL~S~~s~~itG~~i~VDGG  260 (260)
T d1zema1         231 DINEIPGVVAFLLGDDSSFMTGVNLPIAGG  260 (260)
T ss_dssp             CGGGSHHHHHHHHSGGGTTCCSCEEEESCC
T ss_pred             CHHHHHHHHHHHhCchhcCccCCeEEeCCC
Confidence            999999999999999999999999999998

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=1.5e-53  Score=365.89  Aligned_cols=235  Identities=24%  Similarity=0.361  Sum_probs=203.5

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCC
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGR  106 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~  106 (305)
                      ++|+||++|||||++|||+++|+.|+++|++|++++|++...+         ++..+.+|++|.++++++++++.+++|+
T Consensus         3 psl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~---------~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   73 (237)
T d1uzma1           3 PPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPK---------GLFGVEVDVTDSDAVDRAFTAVEEHQGP   73 (237)
T ss_dssp             CCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT---------TSEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchhc---------CceEEEEecCCHHHHHHHHHHHHHhcCC
Confidence            4689999999999999999999999999999999999865432         3677999999999999999999999999


Q ss_pred             ccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhH
Q 021960          107 LDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASK  186 (305)
Q Consensus       107 id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  186 (305)
                      ||+||||||....    .++.+.+.++|++.+++|+.++++++|.++|.|.+++.|+||++||.++..+.++...|+++|
T Consensus        74 iDiLVnnAG~~~~----~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~asK  149 (237)
T d1uzma1          74 VEVLVSNAGLSAD----AFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASK  149 (237)
T ss_dssp             CSEEEEECSCCC---------CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----CCHHHHHHH
T ss_pred             ceEEEeeeccccc----ccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhccCCcccHHHHHHH
Confidence            9999999998644    678899999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCC
Q 021960          187 HAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLR  266 (305)
Q Consensus       187 aa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (305)
                      +|+++|+|+++.|++++||+||+|+||+++|+|.....                   ++..+..   ..  ..|.+|+.+
T Consensus       150 aal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~-------------------~~~~~~~---~~--~~pl~R~~~  205 (237)
T d1uzma1         150 AGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALD-------------------ERIQQGA---LQ--FIPAKRVGT  205 (237)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHSC-------------------HHHHHHH---GG--GCTTCSCBC
T ss_pred             HHHHHHHHHHHhhhhcCCceeeeeeeCcCCChhhhccC-------------------HHHHHHH---Hh--cCCCCCCcC
Confidence            99999999999999999999999999999999965431                   1111111   11  368899999


Q ss_pred             HHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          267 SKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       267 ~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      |||+|+.+.||+|++++|+|||+|.+|||+++
T Consensus       206 pedvA~~v~fL~S~~s~~itG~~i~vdGG~~m  237 (237)
T d1uzma1         206 PAEVAGVVSFLASEDASYISGAVIPVDGGMGM  237 (237)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTTTTC
T ss_pred             HHHHHHHHHHHhCchhcCCcCCeEEECCCCCC
Confidence            99999999999999999999999999999763

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=4e-53  Score=364.49  Aligned_cols=241  Identities=36%  Similarity=0.501  Sum_probs=213.5

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCC
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGR  106 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~  106 (305)
                      +.|+||++|||||++|||+++|+.|+++|++|++++|+++..+...+.+   ++.++.||++|+++++++++++.+++|+
T Consensus         1 M~L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~---~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   77 (242)
T d1ulsa_           1 MRLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV---GAHPVVMDVADPASVERGFAEALAHLGR   77 (242)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT---TCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc---CCeEEEEecCCHHHHHHHHHHHHHhcCC
Confidence            3589999999999999999999999999999999999987776665543   4678999999999999999999999999


Q ss_pred             ccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhH
Q 021960          107 LDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASK  186 (305)
Q Consensus       107 id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  186 (305)
                      ||+||||||....    .++.+.+.++|++.+++|+.++++++|+++|.|.+++.+.++++|| .+..+.++...|+++|
T Consensus        78 iDilVnnAG~~~~----~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss-~~~~~~~~~~~Y~asK  152 (242)
T d1ulsa_          78 LDGVVHYAGITRD----NFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTAS-RVYLGNLGQANYAASM  152 (242)
T ss_dssp             CCEEEECCCCCCC----CCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECC-GGGGCCTTCHHHHHHH
T ss_pred             ceEEEECCccccc----CchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeecc-ccccCCCCCcchHHHH
Confidence            9999999998644    6788999999999999999999999999999998888888888777 4677888999999999


Q ss_pred             HHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCC
Q 021960          187 HAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLR  266 (305)
Q Consensus       187 aa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (305)
                      +|+.+|+|++|.|++++|||||+|+||+++|+|..+..                   ++..+.+..     ..|.+|+.+
T Consensus       153 aal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~-------------------~~~~~~~~~-----~~pl~R~~~  208 (242)
T d1ulsa_         153 AGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVP-------------------EKVREKAIA-----ATPLGRAGK  208 (242)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSC-------------------HHHHHHHHH-----TCTTCSCBC
T ss_pred             HHHHHHHHHHHHHHhhhCcEEEEEeeCcccChhhhcCC-------------------HHHHHHHHh-----cCCCCCCCC
Confidence            99999999999999999999999999999999864321                   122222222     378899999


Q ss_pred             HHHHHHHHHHhccCCCCceeccEEEecCCcccc
Q 021960          267 SKDIAEAALYLASDESRYVSGHNLVVDGGVTTS  299 (305)
Q Consensus       267 ~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~  299 (305)
                      |||+|+.+.||+|++++|+|||+|.+|||+++.
T Consensus       209 pedia~~v~fL~S~~s~~itG~~i~vDGG~t~g  241 (242)
T d1ulsa_         209 PLEVAYAALFLLSDESSFITGQVLFVDGGRTIG  241 (242)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTTTTTT
T ss_pred             HHHHHHHHHHHhchhhCCCCCcEEEECCCccCC
Confidence            999999999999999999999999999999864

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=100.00  E-value=8.4e-53  Score=365.47  Aligned_cols=250  Identities=33%  Similarity=0.473  Sum_probs=216.1

Q ss_pred             CEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 021960           32 KVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRYGRLDI  109 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~  109 (305)
                      |++|||||++|||+++|+.|+++|++|++++|++...+.+.+++  .+.++.++.||++|+++++++++++.+++|+||+
T Consensus         2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   81 (255)
T d1gega_           2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDV   81 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCE
T ss_pred             CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCccE
Confidence            78899999999999999999999999999999988776665544  3567899999999999999999999999999999


Q ss_pred             EEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-CCEEEEecccccccCCCCCccchhhHHH
Q 021960          110 LYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRG-GGCIISTASVAGVMGGLGPHAYTASKHA  188 (305)
Q Consensus       110 li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sKaa  188 (305)
                      ||||||....    .++.+++.++|++.+++|+.++++++|+++|.|.+++ .++|+++||.++..+.++...|+++|+|
T Consensus        82 lVnnAG~~~~----~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa  157 (255)
T d1gega_          82 IVNNAGVAPS----TPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFA  157 (255)
T ss_dssp             EEECCCCCCC----BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHH
T ss_pred             EEeccccccc----CcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcccCcccccchhCHHH
Confidence            9999998643    6889999999999999999999999999999877664 5789999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCCHH
Q 021960          189 IVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSK  268 (305)
Q Consensus       189 ~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (305)
                      +++|+|+||.|++++|||||+|+||+++|+|.......        .......+.++..+.+..     ..|.+|+.+||
T Consensus       158 l~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~--------~~~~~~~~~~~~~~~~~~-----~~pl~R~~~pe  224 (255)
T d1gega_         158 VRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQ--------VSEAAGKPLGYGTAEFAK-----RITLGRLSEPE  224 (255)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHH--------HHHHHTCCTTHHHHHHHT-----TCTTCSCBCHH
T ss_pred             HHhhHHHHHHHhhhhCcEEEEEecCcccChHHhhhhhh--------hHhhhcccchhHHHHHHh-----cCCCCCCcCHH
Confidence            99999999999999999999999999999997654322        011111222222222222     37899999999


Q ss_pred             HHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          269 DIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       269 dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      |+|+.++||+|++++|+|||+|.+|||+..
T Consensus       225 evA~~v~fL~S~~a~~itG~~i~vDGG~~~  254 (255)
T d1gega_         225 DVAACVSYLASPDSDYMTGQSLLIDGGMVF  254 (255)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESSSSSC
T ss_pred             HHHHHHHHHhCchhCCccCcEEEecCCEEe
Confidence            999999999999999999999999999864

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=100.00  E-value=1.2e-53  Score=370.29  Aligned_cols=250  Identities=19%  Similarity=0.204  Sum_probs=217.6

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEEEE
Q 021960           33 VAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILYN  112 (305)
Q Consensus        33 ~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~li~  112 (305)
                      |+|||||++|||+++|+.|+++|++|++++|+.+..+.++...    ..+..+|++|.++++++++++.+++|+||+|||
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~----~~~~~~dv~~~~~~~~~~~~~~~~~G~iDiLVn   77 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFA----ETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVS   77 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHH----HHCTTSEECCCCSHHHHHHHHHHHHSCCCEEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhh----CcEEEeccCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            8999999999999999999999999999999877766654432    223568999999999999999999999999999


Q ss_pred             cCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhHHHHHHH
Q 021960          113 NAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGL  192 (305)
Q Consensus       113 nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~  192 (305)
                      |||.....   .++.+++.++|++.+++|+.++++++|+++|.|++++.|+||++||.++..+.++...|+++|+|+.+|
T Consensus        78 NAg~~~~~---~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~~~~~~~~Y~asKaal~~l  154 (252)
T d1zmta1          78 NDIFAPEF---QPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTL  154 (252)
T ss_dssp             ECCCCCCC---CCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTTCHHHHHHHHHHHHH
T ss_pred             CCcCCCCC---CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeecccccccccccccccccccccccHHHH
Confidence            99976432   678899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCCHHHHHH
Q 021960          193 TKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSKDIAE  272 (305)
Q Consensus       193 ~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  272 (305)
                      +|++|.|++++|||||+|+||+++|+|....+....           ....++..+.+..     ..|.+|+.+|||||+
T Consensus       155 t~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~-----------~~~~~e~~~~~~~-----~~pl~R~g~pedvA~  218 (252)
T d1zmta1         155 ANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEP-----------WKTNPEHVAHVKK-----VTALQRLGTQKELGE  218 (252)
T ss_dssp             HHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHH-----------HTTCHHHHHHHHH-----HSSSSSCBCHHHHHH
T ss_pred             HHHHHHHhcccCcEEEEEecCCCcCcchhhhhhccc-----------ccCCHHHHHHHHh-----cCCCCCCcCHHHHHH
Confidence            999999999999999999999999998655432200           0011222222222     268899999999999


Q ss_pred             HHHHhccCCCCceeccEEEecCCcccccccccC
Q 021960          273 AALYLASDESRYVSGHNLVVDGGVTTSRNCVGL  305 (305)
Q Consensus       273 ~v~~l~s~~~~~~tG~~i~idgG~~~~~~~~~~  305 (305)
                      .+.||+|++++|+|||+|.+|||+++..+|+||
T Consensus       219 ~v~fL~S~~s~~iTG~~i~vdGG~~~~~~~p~~  251 (252)
T d1zmta1         219 LVAFLASGSCDYLTGQVFWLAGGFPMIERWPGM  251 (252)
T ss_dssp             HHHHHHTTSCGGGTTCEEEESTTCCCCCCCTTC
T ss_pred             HHHHHhCchhcCCcCCeEEECCCceeCCCCCcC
Confidence            999999999999999999999999999999997

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=7.1e-53  Score=363.31  Aligned_cols=239  Identities=28%  Similarity=0.492  Sum_probs=210.9

Q ss_pred             CEEEEecCCCchHHHHHHHHHHcCCeEEEEec-CcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 021960           32 KVAIITGGARGIGEAAVRLFARHGAKVVIADV-EDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRYGRLD  108 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r-~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id  108 (305)
                      +++|||||++|||+++|+.|+++|++|++.++ ++...+.+.+.+  .+.++.++.+|++|.++++++++++.+++|+||
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   81 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTID   81 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            48999999999999999999999999998754 544444444433  245788999999999999999999999999999


Q ss_pred             EEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhHHH
Q 021960          109 ILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHA  188 (305)
Q Consensus       109 ~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKaa  188 (305)
                      +||||||....    .++.+.+.++|++.+++|+.++++++|.++|.|++++.|+||++||.++..+.++...|+++|+|
T Consensus        82 iLVnnAg~~~~----~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~~~Y~asKaa  157 (244)
T d1edoa_          82 VVVNNAGITRD----TLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAG  157 (244)
T ss_dssp             EEEECCCCCCC----CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHH
T ss_pred             ccccccccccc----cchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcCCCCCCHHHHHHHHH
Confidence            99999998654    67889999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCCHH
Q 021960          189 IVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSK  268 (305)
Q Consensus       189 ~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (305)
                      +.+|+|+||.|++++|||||+|+||+++|+|.....                   ++..+.+.   .  ..|.+|+++||
T Consensus       158 l~~ltk~lA~el~~~gIrvN~I~PG~i~T~~~~~~~-------------------~~~~~~~~---~--~~pl~R~~~p~  213 (244)
T d1edoa_         158 VIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLG-------------------EDMEKKIL---G--TIPLGRTGQPE  213 (244)
T ss_dssp             HHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTC-------------------HHHHHHHH---T--SCTTCSCBCHH
T ss_pred             HHHChHHHHHHHhhhCcEEEEEecceeccHHHHHhh-------------------HHHHHHHH---h--cCCCCCCcCHH
Confidence            999999999999999999999999999999865431                   12222221   1  47889999999


Q ss_pred             HHHHHHHHhc-cCCCCceeccEEEecCCccc
Q 021960          269 DIAEAALYLA-SDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       269 dva~~v~~l~-s~~~~~~tG~~i~idgG~~~  298 (305)
                      |+|+.+.||+ |++++|+|||+|.+|||+++
T Consensus       214 dvA~~v~fLa~S~~a~~itG~~i~vdGG~si  244 (244)
T d1edoa_         214 NVAGLVEFLALSPAASYITGQAFTIDGGIAI  244 (244)
T ss_dssp             HHHHHHHHHHHCSGGGGCCSCEEEESTTTTC
T ss_pred             HHHHHHHHHHCCchhcCCcCCeEEeCCCeeC
Confidence            9999999996 89999999999999999874

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=2.1e-52  Score=366.24  Aligned_cols=257  Identities=27%  Similarity=0.383  Sum_probs=215.9

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc-----CCCCeEEEEecCCCHHHHHHHHHHHH
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL-----APAPVTFVHCDVSLEEDIENLINSTV  101 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~-----~~~~v~~~~~D~~d~~~i~~~~~~~~  101 (305)
                      ++|+||++|||||++|||+++|+.|+++|++|++++|+++..+.+.+.+     .+.++.++.||++|.++++++++++.
T Consensus         1 prL~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~   80 (272)
T d1xkqa_           1 PRFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTL   80 (272)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999999987776665544     23468999999999999999999999


Q ss_pred             HhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCcc
Q 021960          102 SRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHA  181 (305)
Q Consensus       102 ~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~  181 (305)
                      +++|+||+||||||............+.+.++|++.+++|+.++++++|+++|.|++++++.|+++||.++..+.++...
T Consensus        81 ~~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~Ss~a~~~~~~~~~~  160 (272)
T d1xkqa_          81 KQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDFLY  160 (272)
T ss_dssp             HHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSSCCCSSHH
T ss_pred             HHhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccCCccccccchhccccCCCCcch
Confidence            99999999999999876543334445778899999999999999999999999998776555555566678899999999


Q ss_pred             chhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHh--hcCC
Q 021960          182 YTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVS--GLGN  259 (305)
Q Consensus       182 Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~  259 (305)
                      |+++|+|+.+|+|+||.|++++|||||+|+||+|+|+|.......                 ++..+...+...  .-..
T Consensus       161 Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~  223 (272)
T d1xkqa_         161 YAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMP-----------------DQASQKFYNFMASHKECI  223 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCC-----------------HHHHHHHHHHHHHCTTTC
T ss_pred             hhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccCCc-----------------hHHHHHHHHHHHHHhcCC
Confidence            999999999999999999999999999999999999997654322                 111112222111  1247


Q ss_pred             CCCCCCCHHHHHHHHHHhccCC-CCceeccEEEecCCccccc
Q 021960          260 LKGTTLRSKDIAEAALYLASDE-SRYVSGHNLVVDGGVTTSR  300 (305)
Q Consensus       260 ~~~~~~~~~dva~~v~~l~s~~-~~~~tG~~i~idgG~~~~~  300 (305)
                      |.+|+.+|||||+.++||+|++ +.|+|||+|.+|||+++..
T Consensus       224 PlgR~g~pediA~~v~fL~S~~as~~iTG~~i~vDGG~~l~~  265 (272)
T d1xkqa_         224 PIGAAGKPEHIANIILFLADRNLSFYILGQSIVADGGTSLVM  265 (272)
T ss_dssp             TTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGCB
T ss_pred             CCCCCcCHHHHHHHHHHHhCcchhCCccCeEEEeCcCHHHhc
Confidence            8999999999999999999975 5799999999999998864

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=3.5e-52  Score=365.17  Aligned_cols=255  Identities=27%  Similarity=0.401  Sum_probs=219.4

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc-----CCCCeEEEEecCCCHHHHHHHHHHHHH
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL-----APAPVTFVHCDVSLEEDIENLINSTVS  102 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~-----~~~~v~~~~~D~~d~~~i~~~~~~~~~  102 (305)
                      +|+||++|||||++|||+++|+.|+++|++|++++|+++..+.+.+++     ...++.++.+|++|.++++++++++.+
T Consensus         1 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   80 (274)
T d1xhla_           1 RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLA   80 (274)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999987766655444     234689999999999999999999999


Q ss_pred             hcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccc
Q 021960          103 RYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAY  182 (305)
Q Consensus       103 ~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y  182 (305)
                      ++|+||++|||||......  ..+.+.+.++|++.+++|+.++++++|+++|.|.+++.++|+++||.++..+.++...|
T Consensus        81 ~~G~iDilVnnAG~~~~~~--~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~~~~~~~~Y  158 (274)
T d1xhla_          81 KFGKIDILVNNAGANLADG--TANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYY  158 (274)
T ss_dssp             HHSCCCEEEECCCCCCCCS--CCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSCCTTSHHH
T ss_pred             HcCCceEEEeecccccccc--cccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhccccCCCCcee
Confidence            9999999999999754421  34556788999999999999999999999999999989999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhh--cCCC
Q 021960          183 TASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSG--LGNL  260 (305)
Q Consensus       183 ~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~  260 (305)
                      +++|+|+.+|+|++|.|++++|||||+|+||+|+|+|....+..                 +...+...++...  -..|
T Consensus       159 ~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~iP  221 (274)
T d1xhla_         159 ACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLP-----------------ETASDKLYSFIGSRKECIP  221 (274)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCC-----------------HHHHHHHHHHHHHCTTTCT
T ss_pred             hhhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhccc-----------------chhhHHHHHHHHHHHcCCC
Confidence            99999999999999999999999999999999999997654332                 1111222222221  1368


Q ss_pred             CCCCCCHHHHHHHHHHhccC-CCCceeccEEEecCCcccccc
Q 021960          261 KGTTLRSKDIAEAALYLASD-ESRYVSGHNLVVDGGVTTSRN  301 (305)
Q Consensus       261 ~~~~~~~~dva~~v~~l~s~-~~~~~tG~~i~idgG~~~~~~  301 (305)
                      .+|+.+|||||+.++||+|+ +++|+|||+|.+|||+++...
T Consensus       222 lgR~g~pediA~~v~fL~S~d~s~~itG~~i~vDGG~~l~~g  263 (274)
T d1xhla_         222 VGHCGKPEEIANIIVFLADRNLSSYIIGQSIVADGGSTLVMG  263 (274)
T ss_dssp             TSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGCCG
T ss_pred             CCCCcCHHHHHHHHHHHcCCccccCccCcEEEeCcCHHHhcC
Confidence            99999999999999999995 689999999999999988654

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=1.7e-52  Score=365.43  Aligned_cols=255  Identities=32%  Similarity=0.417  Sum_probs=201.3

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc-----CCCCeEEEEecCCCHHHHHHHHHHHHH
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL-----APAPVTFVHCDVSLEEDIENLINSTVS  102 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~-----~~~~v~~~~~D~~d~~~i~~~~~~~~~  102 (305)
                      +|+||++|||||++|||+++|+.|+++|++|++++|+++..+.+.+++     ...++.++.+|++|.++++++++++.+
T Consensus         2 rl~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (264)
T d1spxa_           2 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG   81 (264)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHH
Confidence            689999999999999999999999999999999999987776665543     234689999999999999999999999


Q ss_pred             hcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecc-cccccCCCCCcc
Q 021960          103 RYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTAS-VAGVMGGLGPHA  181 (305)
Q Consensus       103 ~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS-~~~~~~~~~~~~  181 (305)
                      ++|+||+||||||..........+.+.+.++|++.+++|+.++++++|.++|.|++++ +.+|+++| .++..+.++...
T Consensus        82 ~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~-g~iI~~~S~~~~~~~~~~~~~  160 (264)
T d1spxa_          82 KFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLHATPDFPY  160 (264)
T ss_dssp             HHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSSCCTTSHH
T ss_pred             HhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCcccccc-CcceeeeeeccccccCCCchh
Confidence            9999999999999865443445667789999999999999999999999999998765 45555555 556789999999


Q ss_pred             chhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCC
Q 021960          182 YTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLK  261 (305)
Q Consensus       182 Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (305)
                      |+++|+|+++|+|+||.|++++|||||+|+||+++|+|...........             ++..+.......  ..|.
T Consensus       161 Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~-------------~~~~~~~~~~~~--~~Pl  225 (264)
T d1spxa_         161 YSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETS-------------KKFYSTMATMKE--CVPA  225 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC---------------------------HHHHHHHHH--HCTT
T ss_pred             hhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccCCcHHHH-------------HHHHHHHHHHHh--cCCC
Confidence            9999999999999999999999999999999999999865443221000             011111111122  3789


Q ss_pred             CCCCCHHHHHHHHHHhccC-CCCceeccEEEecCCccc
Q 021960          262 GTTLRSKDIAEAALYLASD-ESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       262 ~~~~~~~dva~~v~~l~s~-~~~~~tG~~i~idgG~~~  298 (305)
                      +|+++|+|||+.++||+|+ .++|+|||+|.+|||+++
T Consensus       226 ~R~g~pedvA~~v~fL~S~~~s~~itG~~i~vDGG~sl  263 (264)
T d1spxa_         226 GVMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGSSL  263 (264)
T ss_dssp             SSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGG
T ss_pred             CCCcCHHHHHHHHHHHhCCcccCCccCceEEeCCChhh
Confidence            9999999999999999995 489999999999999986

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=100.00  E-value=7.3e-52  Score=359.82  Aligned_cols=251  Identities=26%  Similarity=0.389  Sum_probs=216.0

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      .+|+||++|||||++|||+++|+.|+++|++|++++|+++..+.+.+.+  .+.++.++.+|++|.++++++++++.+++
T Consensus         2 f~L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~   81 (258)
T d1ae1a_           2 WSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVF   81 (258)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHh
Confidence            3689999999999999999999999999999999999987776665554  35668899999999999999999999998


Q ss_pred             -CCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccch
Q 021960          105 -GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYT  183 (305)
Q Consensus       105 -g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~  183 (305)
                       +.+|+||||||....    .++.+++.++|++.+++|+.+++++++++.|.|.+++.|+||++||.++..+.++...|+
T Consensus        82 ~g~idilinnag~~~~----~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~~~~~~~~Y~  157 (258)
T d1ae1a_          82 DGKLNILVNNAGVVIH----KEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYS  157 (258)
T ss_dssp             TSCCCEEEECCCCCCC----CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTTCHHHH
T ss_pred             CCCcEEEecccccccc----CccccCCHHHHhhhhhhccccccccccccccccccccccccccccccccccccccchhHH
Confidence             579999999998755    678899999999999999999999999999999999999999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCC
Q 021960          184 ASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGT  263 (305)
Q Consensus       184 ~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (305)
                      ++|+|+++|+|.+|+|++++|||||+|+||+++|+|....+.....             .++.++.+..     ..|.+|
T Consensus       158 ~sK~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~-------------~~~~~~~~~~-----~~plgR  219 (258)
T d1ae1a_         158 ASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPH-------------QKEEIDNFIV-----KTPMGR  219 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC--------------------------CHHHHHHHHH-----HSTTCS
T ss_pred             HHHHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhhhhhh-------------hHHHHHHHHh-----cCCCCC
Confidence            9999999999999999999999999999999999997665443211             1223333322     268899


Q ss_pred             CCCHHHHHHHHHHhccCCCCceeccEEEecCCcccc
Q 021960          264 TLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTS  299 (305)
Q Consensus       264 ~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~  299 (305)
                      +++|+|||+++.||+|++++|+|||+|.+|||++..
T Consensus       220 ~~~pediA~~v~fL~S~~s~~itG~~i~vDGG~s~~  255 (258)
T d1ae1a_         220 AGKPQEVSALIAFLCFPAASYITGQIIWADGGFTAN  255 (258)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             CcCHHHHHHHHHHHhChhhCCCcCcEEEeCCCeecc
Confidence            999999999999999999999999999999999874

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=3.2e-52  Score=358.75  Aligned_cols=241  Identities=29%  Similarity=0.360  Sum_probs=211.3

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCC
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGR  106 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~  106 (305)
                      ++|+||++|||||++|||+++|+.|+++|++|++++|+++..+.+.+++.  .+..+.+|++|.+++++++    +++|+
T Consensus         1 mdl~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~--~~~~~~~Dv~~~~~v~~~~----~~~g~   74 (242)
T d1cyda_           1 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECP--GIEPVCVDLGDWDATEKAL----GGIGP   74 (242)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST--TCEEEECCTTCHHHHHHHH----TTCCC
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcC--CCeEEEEeCCCHHHHHHHH----HHcCC
Confidence            36899999999999999999999999999999999999877776666553  3778999999999887665    45799


Q ss_pred             ccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHc-CCCCEEEEecccccccCCCCCccchhh
Q 021960          107 LDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMIN-RGGGCIISTASVAGVMGGLGPHAYTAS  185 (305)
Q Consensus       107 id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~~iv~isS~~~~~~~~~~~~Y~~s  185 (305)
                      ||+||||||....    .++.+++.++|++.+++|+.++++++|.+.|.|.+ +.+|+||++||..+..+.++...|+++
T Consensus        75 iDilVnnAg~~~~----~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~as  150 (242)
T d1cyda_          75 VDLLVNNAALVIM----QPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSST  150 (242)
T ss_dssp             CSEEEECCCCCCC----BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred             CeEEEECCccccc----hhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccccCCccccccch
Confidence            9999999998644    68899999999999999999999999999998654 457899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCC
Q 021960          186 KHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL  265 (305)
Q Consensus       186 Kaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (305)
                      |+|+.+|+|++|.|++++|||||+|+||+++|+|.......                 ++..+.+..     ..|.+|+.
T Consensus       151 Kaal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~-----------------~~~~~~~~~-----~~pl~R~~  208 (242)
T d1cyda_         151 KGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSAD-----------------PEFARKLKE-----RHPLRKFA  208 (242)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCC-----------------HHHHHHHHH-----HSTTSSCB
T ss_pred             HHHHHHHHHHHHHHhCccCeecccCCCCCccCHHHHhhcCC-----------------HHHHHHHHh-----cCCCCCCc
Confidence            99999999999999999999999999999999997654322                 222222222     26889999


Q ss_pred             CHHHHHHHHHHhccCCCCceeccEEEecCCcccc
Q 021960          266 RSKDIAEAALYLASDESRYVSGHNLVVDGGVTTS  299 (305)
Q Consensus       266 ~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~  299 (305)
                      +|||+|+.+.||+|++++|+|||+|.+|||++.+
T Consensus       209 ~peeva~~v~fL~S~~s~~itG~~i~vDGG~~as  242 (242)
T d1cyda_         209 EVEDVVNSILFLLSDRSASTSGGGILVDAGYLAS  242 (242)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSSEEEESTTGGGC
T ss_pred             CHHHHHHHHHHHhCchhcCcCCceEEeCcchhcc
Confidence            9999999999999999999999999999999764

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.7e-52  Score=358.28  Aligned_cols=241  Identities=27%  Similarity=0.365  Sum_probs=211.4

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcC
Q 021960           26 HRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYG  105 (305)
Q Consensus        26 ~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g  105 (305)
                      ...|+||++|||||++|||+++|+.|+++|++|++++|+++..+.+.+++.  .+..+.+|++|.+++++++    +++|
T Consensus         2 ~~~L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~--~~~~~~~Dv~d~~~v~~~~----~~~g   75 (244)
T d1pr9a_           2 ELFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP--GIEPVCVDLGDWEATERAL----GSVG   75 (244)
T ss_dssp             CCCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST--TCEEEECCTTCHHHHHHHH----TTCC
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcC--CCeEEEEeCCCHHHHHHHH----HHhC
Confidence            456899999999999999999999999999999999999888777766654  3778899999999987765    4569


Q ss_pred             CccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-cCCCCEEEEecccccccCCCCCccchh
Q 021960          106 RLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMI-NRGGGCIISTASVAGVMGGLGPHAYTA  184 (305)
Q Consensus       106 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~~iv~isS~~~~~~~~~~~~Y~~  184 (305)
                      +||+||||||....    .++.+.+.++|++.+++|+.+++++++.++|.|. +++.|+||++||.++..+.++...|++
T Consensus        76 ~iDilVnnAg~~~~----~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~~~Y~a  151 (244)
T d1pr9a_          76 PVDLLVNNAAVALL----QPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCS  151 (244)
T ss_dssp             CCCEEEECCCCCCC----BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHH
T ss_pred             CceEEEeccccccc----cchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccccccchhhhhh
Confidence            99999999998654    6888999999999999999999999999999754 556799999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCC
Q 021960          185 SKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT  264 (305)
Q Consensus       185 sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (305)
                      +|+|+++|+|++|.|++++|||||+|+||+++|+|....+..                 .+..+.   +..  ..|.+|+
T Consensus       152 sKaal~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~-----------------~~~~~~---~~~--~~pl~R~  209 (244)
T d1pr9a_         152 TKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSD-----------------PHKAKT---MLN--RIPLGKF  209 (244)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTTSCS-----------------HHHHHH---HHT--TCTTCSC
T ss_pred             hHHHHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhhccC-----------------hHHHHH---HHh--cCCCCCC
Confidence            999999999999999999999999999999999997654432                 111122   222  3688999


Q ss_pred             CCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          265 LRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       265 ~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      .+|||||+.+.||+|++++|+|||+|.+|||++.
T Consensus       210 ~~peevA~~v~fL~S~~a~~itG~~i~vDGG~~A  243 (244)
T d1pr9a_         210 AEVEHVVNAILFLLSDRSGMTTGSTLPVEGGFWA  243 (244)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             cCHHHHHHHHHHHhCchhCCcCCcEEEECccHhh
Confidence            9999999999999999999999999999999974

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=100.00  E-value=1.5e-52  Score=363.13  Aligned_cols=246  Identities=35%  Similarity=0.490  Sum_probs=215.7

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRL  107 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~i  107 (305)
                      +|+||++|||||++|||+++|+.|+++|++|++++|+++..+.+.+++ +.+..++.+|++|.++++++++++.+++|++
T Consensus         3 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i   81 (253)
T d1hxha_           3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL-GERSMFVRHDVSSEADWTLVMAAVQRRLGTL   81 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH-CTTEEEECCCTTCHHHHHHHHHHHHHHHCSC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-CCCeEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            589999999999999999999999999999999999988877776666 4458889999999999999999999999999


Q ss_pred             cEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhHH
Q 021960          108 DILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKH  187 (305)
Q Consensus       108 d~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKa  187 (305)
                      |+||||||....    .++.+.+.++|++.+++|+.+++++++.++|.|+++ +|+||++||.++..+.++...|+++|+
T Consensus        82 DilVnnAG~~~~----~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~-~G~Iv~isS~~~~~~~~~~~~Y~asKa  156 (253)
T d1hxha_          82 NVLVNNAGILLP----GDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKET-GGSIINMASVSSWLPIEQYAGYSASKA  156 (253)
T ss_dssp             CEEEECCCCCCC----BCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT-CEEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred             CeEEecccccCC----CCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhc-CCceecccchhhhcCccccccccchhH
Confidence            999999998654    678899999999999999999999999999999654 599999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCc--CCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCC
Q 021960          188 AIVGLTKNAACELGR--YGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL  265 (305)
Q Consensus       188 a~~~~~~~la~e~~~--~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (305)
                      |+.+|+|++|.|+++  +|||||+|+||+++|+|....++.....              +..   .. . ....+.+++.
T Consensus       157 al~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~~~~~~~~~~--------------~~~---~~-~-~~~~~~gr~~  217 (253)
T d1hxha_         157 AVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSK--------------EMV---LH-D-PKLNRAGRAY  217 (253)
T ss_dssp             HHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCH--------------HHH---BC-B-TTTBTTCCEE
T ss_pred             HHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHhHHhhCcchhhH--------------HHH---Hh-C-ccccccCCCC
Confidence            999999999999987  4699999999999999977655442110              000   00 0 0024678999


Q ss_pred             CHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          266 RSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       266 ~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      +|||+|+.++||+|++++|+|||+|.+|||+..
T Consensus       218 ~pedvA~~v~fL~S~~s~~itG~~i~VDGG~~~  250 (253)
T d1hxha_         218 MPERIAQLVLFLASDESSVMSGSELHADNSILG  250 (253)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESSSCTT
T ss_pred             CHHHHHHHHHHHhChhhCCCcCcEEEECccHhh
Confidence            999999999999999999999999999999753

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=100.00  E-value=2.2e-51  Score=357.57  Aligned_cols=249  Identities=27%  Similarity=0.325  Sum_probs=214.1

Q ss_pred             CCCCCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc---CCCCeEEEEecCCCHHHHHHHHHH
Q 021960           23 PPSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL---APAPVTFVHCDVSLEEDIENLINS   99 (305)
Q Consensus        23 ~~~~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~---~~~~v~~~~~D~~d~~~i~~~~~~   99 (305)
                      |.+.++|+||++|||||++|||+++|+.|+++|++|++++|+....+...+++   .+.++.++.||++|++++++++++
T Consensus         1 p~~~m~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~   80 (260)
T d1h5qa_           1 PGFTISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQ   80 (260)
T ss_dssp             CCEEECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCcccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHH
Confidence            45667899999999999999999999999999999999999887765544433   256789999999999999999999


Q ss_pred             HHHhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC-CCCEEEEecccccccC---
Q 021960          100 TVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINR-GGGCIISTASVAGVMG---  175 (305)
Q Consensus       100 ~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~isS~~~~~~---  175 (305)
                      +.+++|++|+||||||....    .++.+.+.++|++.+++|+.+++++++.+.|.|.++ ..++|++++|......   
T Consensus        81 ~~~~~g~iDilVnnAg~~~~----~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~  156 (260)
T d1h5qa_          81 IDADLGPISGLIANAGVSVV----KPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQS  156 (260)
T ss_dssp             HHHHSCSEEEEEECCCCCCC----SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEE
T ss_pred             HHHHhCCCcEeccccccccc----CCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeecccccccccc
Confidence            99999999999999998644    678899999999999999999999999999998654 5677777777665533   


Q ss_pred             ----CCCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHH
Q 021960          176 ----GLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKME  251 (305)
Q Consensus       176 ----~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (305)
                          .++...|+++|+|+.+|+|++|.|++++|||||+|+||+++|+|.....                   ++..+.+.
T Consensus       157 ~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~-------------------~~~~~~~~  217 (260)
T d1h5qa_         157 SLNGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMD-------------------KKIRDHQA  217 (260)
T ss_dssp             ETTEECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSC-------------------HHHHHHHH
T ss_pred             ccccCccccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhccC-------------------HHHHHHHH
Confidence                3567899999999999999999999999999999999999999865421                   12222222


Q ss_pred             HHHhhcCCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCcccc
Q 021960          252 EFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTS  299 (305)
Q Consensus       252 ~~~~~~~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~  299 (305)
                      .     ..|.+|+.+|||||+.++||+|++++|+|||+|.+|||++++
T Consensus       218 ~-----~~pl~R~g~pedvA~~v~fL~S~~s~~itG~~i~VDGG~~~~  260 (260)
T d1h5qa_         218 S-----NIPLNRFAQPEEMTGQAILLLSDHATYMTGGEYFIDGGQLIW  260 (260)
T ss_dssp             H-----TCTTSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEECTTGGGC
T ss_pred             h-----cCCCCCCcCHHHHHHHHHHHhcchhCCCcCceEEECCCeecC
Confidence            2     478899999999999999999999999999999999999764

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5e-51  Score=361.24  Aligned_cols=250  Identities=26%  Similarity=0.374  Sum_probs=216.1

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc-------CCCCeEEEEecCCCHHHHHHHHHH
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL-------APAPVTFVHCDVSLEEDIENLINS   99 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~-------~~~~v~~~~~D~~d~~~i~~~~~~   99 (305)
                      ..|+||++|||||++|||+++|+.|+++|++|++++|+.+..+...+++       .+.++..+.||++|.+++++++++
T Consensus         8 g~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~   87 (297)
T d1yxma1           8 GLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKS   87 (297)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHH
Confidence            3689999999999999999999999999999999999877665544332       245799999999999999999999


Q ss_pred             HHHhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCC
Q 021960          100 TVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGP  179 (305)
Q Consensus       100 ~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~  179 (305)
                      +.+.+|+||+||||||....    .++.+.+.++|++.+++|+.++++++|+++|.|.+++.++||++|| ++..+.++.
T Consensus        88 ~~~~~G~iDiLVnnAg~~~~----~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss-~~~~~~~~~  162 (297)
T d1yxma1          88 TLDTFGKINFLVNNGGGQFL----SPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIV-PTKAGFPLA  162 (297)
T ss_dssp             HHHHHSCCCEEEECCCCCCC----CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECC-CCTTCCTTC
T ss_pred             HHHHhCCeEEEEeecccccc----CchhhhhhhhhhhhhcccccchhhHHHHHHHhhccccccccccccc-ccccccccc
Confidence            99999999999999997644    6788999999999999999999999999999999999999998866 455678889


Q ss_pred             ccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCC
Q 021960          180 HAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGN  259 (305)
Q Consensus       180 ~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (305)
                      ..|+++|+|+.+|+|++|.|++++||+||+|+||+|+|+|..+.+.....               +   .......  ..
T Consensus       163 ~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~---------------~---~~~~~~~--~~  222 (297)
T d1yxma1         163 VHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQ---------------S---FFEGSFQ--KI  222 (297)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGG---------------G---GGTTGGG--GS
T ss_pred             ccchhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhccccCH---------------H---HHHHHHh--cC
Confidence            99999999999999999999999999999999999999996554332100               0   0011111  36


Q ss_pred             CCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCcccccc
Q 021960          260 LKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTSRN  301 (305)
Q Consensus       260 ~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~~~  301 (305)
                      |.+|+++|||||+.++||||++++|+|||+|.||||+++...
T Consensus       223 plgR~g~pedvA~~v~fL~Sd~s~~iTG~~i~VDGG~sl~~~  264 (297)
T d1yxma1         223 PAKRIGVPEEVSSVVCFLLSPAASFITGQSVDVDGGRSLYTH  264 (297)
T ss_dssp             TTSSCBCTHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCBT
T ss_pred             CCCCCcCHHHHHHHHHHHhCchhcCcCCcEEEeCcChhhhcC
Confidence            789999999999999999999999999999999999987543

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=8.9e-51  Score=353.06  Aligned_cols=250  Identities=20%  Similarity=0.238  Sum_probs=208.2

Q ss_pred             CCCCCCCEEEEecCCC--chHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc-CCCCeEEEEecCCCHHHHHHHHHHHHH
Q 021960           26 HRRLEGKVAIITGGAR--GIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL-APAPVTFVHCDVSLEEDIENLINSTVS  102 (305)
Q Consensus        26 ~~~l~~k~vlVtGas~--giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~-~~~~v~~~~~D~~d~~~i~~~~~~~~~  102 (305)
                      ..+|+||++|||||+|  |||+++|+.|+++|++|++.+|++...+...+.. ...+...+.+|++|.++++++++++.+
T Consensus         3 ~~~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   82 (256)
T d1ulua_           3 TVDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKE   82 (256)
T ss_dssp             EECCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHH
Confidence            3478999999999987  9999999999999999999999876554433322 234577899999999999999999999


Q ss_pred             hcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccc
Q 021960          103 RYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAY  182 (305)
Q Consensus       103 ~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y  182 (305)
                      ++|+||+||||||.........++.+.+.++|++.+++|+.+++.+++.+.|.|.+  .|+||++||..+..+.++...|
T Consensus        83 ~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~--~G~Iv~isS~~~~~~~~~~~~Y  160 (256)
T d1ulua_          83 AFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE--GGGIVTLTYYASEKVVPKYNVM  160 (256)
T ss_dssp             HHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE--EEEEEEEECGGGTSBCTTCHHH
T ss_pred             hcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhcc--CCEEEEEeehHhcCCCCCchHH
Confidence            99999999999998654333356678899999999999999999999999998854  5899999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCC
Q 021960          183 TASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKG  262 (305)
Q Consensus       183 ~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (305)
                      +++|+|+++|+|++|.|++++|||||+|+||+++|++.......                 ++..+.+..     ..|.+
T Consensus       161 ~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~~~-----------------~~~~~~~~~-----~~pl~  218 (256)
T d1ulua_         161 AIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGF-----------------TKMYDRVAQ-----TAPLR  218 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------C-----------------HHHHHHHHH-----HSTTS
T ss_pred             HHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccchhhh-----------------HHHHHHHHh-----cCCCC
Confidence            99999999999999999999999999999999999985433211                 122222222     26889


Q ss_pred             CCCCHHHHHHHHHHhccCCCCceeccEEEecCCcccc
Q 021960          263 TTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTS  299 (305)
Q Consensus       263 ~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~  299 (305)
                      |+.+|||||+.+.||+|++++|+|||+|.+|||+++.
T Consensus       219 R~~~pedvA~~v~fL~S~~s~~itG~~i~VDGG~~~~  255 (256)
T d1ulua_         219 RNITQEEVGNLGLFLLSPLASGITGEVVYVDAGYHIM  255 (256)
T ss_dssp             SCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGB
T ss_pred             CCcCHHHHHHHHHHHhCchhCCccCCeEEECcCEeCc
Confidence            9999999999999999999999999999999999864

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=3.8e-50  Score=344.36  Aligned_cols=231  Identities=23%  Similarity=0.371  Sum_probs=201.8

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 021960           29 LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLD  108 (305)
Q Consensus        29 l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id  108 (305)
                      |+||++|||||++|||+++|+.|+++|++|++++|+++..+..       ...++.||+++.      ++.+.+++++||
T Consensus         2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~~-------~~~~~~~Dv~~~------~~~~~~~~g~iD   68 (234)
T d1o5ia_           2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRS-------GHRYVVCDLRKD------LDLLFEKVKEVD   68 (234)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHT-------CSEEEECCTTTC------HHHHHHHSCCCS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHhc-------CCcEEEcchHHH------HHHHHHHhCCCc
Confidence            6899999999999999999999999999999999986543322       145678999863      445667789999


Q ss_pred             EEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhHHH
Q 021960          109 ILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHA  188 (305)
Q Consensus       109 ~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKaa  188 (305)
                      +||||||....    .++.+.+.++|++.+++|+.++++++|.++|.|++++.|+||+++|..+..+.++...|+++|+|
T Consensus        69 ~lVnnAG~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~~~~~~~~Y~asKaa  144 (234)
T d1o5ia_          69 ILVLNAGGPKA----GFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMA  144 (234)
T ss_dssp             EEEECCCCCCC----BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHH
T ss_pred             EEEecccccCC----cchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccccccccccccccccccccccccchhHHHH
Confidence            99999997543    67889999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCCHH
Q 021960          189 IVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSK  268 (305)
Q Consensus       189 ~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (305)
                      +.+|+|++|.|++++|||||+|+||+++|+|..+.+..                  +..+.+.   +  ..|.+|+.+||
T Consensus       145 l~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~------------------~~~~~~~---~--~~pl~R~~~pe  201 (234)
T d1o5ia_         145 LTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSE------------------EKKKQVE---S--QIPMRRMAKPE  201 (234)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSCH------------------HHHHHHH---T--TSTTSSCBCHH
T ss_pred             HHHHHHHHHHHhcccCeEEeecccCccchhhhhhhcCH------------------HHHHHHH---h--cCCCCCCcCHH
Confidence            99999999999999999999999999999997654322                  2222222   1  37899999999


Q ss_pred             HHHHHHHHhccCCCCceeccEEEecCCcccc
Q 021960          269 DIAEAALYLASDESRYVSGHNLVVDGGVTTS  299 (305)
Q Consensus       269 dva~~v~~l~s~~~~~~tG~~i~idgG~~~~  299 (305)
                      |+|+.+.||+|++++|+|||+|.+|||++.+
T Consensus       202 diA~~v~fL~S~~s~~itG~~i~vDGG~s~~  232 (234)
T d1o5ia_         202 EIASVVAFLCSEKASYLTGQTIVVDGGLSKF  232 (234)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTTCCCC
T ss_pred             HHHHHHHHHhChhhcCCcCcEEEECcccccC
Confidence            9999999999999999999999999999753

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=100.00  E-value=3.3e-50  Score=352.88  Aligned_cols=259  Identities=29%  Similarity=0.385  Sum_probs=213.4

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCC
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGR  106 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~  106 (305)
                      ++|+||++|||||++|||+++|+.|+++|++|++++|+.+..+.+.+.+ +.++..+.+|++|.++++++++++.+++|+
T Consensus         1 M~L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~-~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~   79 (276)
T d1bdba_           1 MKLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDH-GDNVLGIVGDVRSLEDQKQAASRCVARFGK   79 (276)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-GGGEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-CCCeeEEecccccHHHHHHHHHHHHHHhCC
Confidence            3589999999999999999999999999999999999987776665554 356899999999999999999999999999


Q ss_pred             ccEEEEcCCCCCCCCCC-CcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhh
Q 021960          107 LDILYNNAGVLGNQRKH-KSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTAS  185 (305)
Q Consensus       107 id~li~nag~~~~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  185 (305)
                      +|++|||||........ ....+.+.++|++.+++|+.++++++|.++|.|++++ |++|+++|..+..+.++...|+++
T Consensus        80 idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-g~iI~i~S~~~~~~~~~~~~Y~as  158 (276)
T d1bdba_          80 IDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASR-GNVIFTISNAGFYPNGGGPLYTAA  158 (276)
T ss_dssp             CCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTSTTSSCHHHHHH
T ss_pred             cccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcC-CCceeeeechhccCCCCCchHHHH
Confidence            99999999976443211 2234455678999999999999999999999998764 889999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCC
Q 021960          186 KHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL  265 (305)
Q Consensus       186 Kaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (305)
                      |+|+.+|+|++|.|+++. ||||+|+||+|+|+|............         ..    .....+.... ..|.+|+.
T Consensus       159 Kaal~~ltr~lA~ela~~-IrVN~I~PG~i~T~~~~~~~~~~~~~~---------~~----~~~~~~~~~~-~~PlgR~g  223 (276)
T d1bdba_         159 KHAIVGLVRELAFELAPY-VRVNGVGSGGINSDLRGPSSLGMGSKA---------IS----TVPLADMLKS-VLPIGRMP  223 (276)
T ss_dssp             HHHHHHHHHHHHHHHTTT-CEEEEEEECCCCSCCCCCGGGC----------------------CHHHHHTT-TCTTSSCC
T ss_pred             HHHHHHHHHHHHHHhhcc-eEEcccCCCCEecCcCCccchhhhhhc---------cC----cHHHHHHHHh-cCCCCCCc
Confidence            999999999999999975 999999999999998654433211110         00    0111222222 37899999


Q ss_pred             CHHHHHHHHHHhccC-CCCceeccEEEecCCccccccc
Q 021960          266 RSKDIAEAALYLASD-ESRYVSGHNLVVDGGVTTSRNC  302 (305)
Q Consensus       266 ~~~dva~~v~~l~s~-~~~~~tG~~i~idgG~~~~~~~  302 (305)
                      +|||+|+.++||+|+ +++|+|||+|.||||+++..-+
T Consensus       224 ~peeva~~v~fL~S~~~a~~itG~~i~VDGG~~~~g~~  261 (276)
T d1bdba_         224 EVEEYTGAYVFFATRGDAAPATGALLNYDGGLGVRGFF  261 (276)
T ss_dssp             CGGGGSHHHHHHHCHHHHTTCSSCEEEESSSGGGCCSS
T ss_pred             CHHHHHHHHHHHcCCcccCCeeCcEEEECcChhhccee
Confidence            999999999999984 6899999999999999875433

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=100.00  E-value=8.3e-50  Score=343.55  Aligned_cols=239  Identities=36%  Similarity=0.535  Sum_probs=204.4

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRL  107 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~i  107 (305)
                      .|+||++|||||++|||+++|+.|+++|++|++++|+....+...+.+ +.++.++.+|++|+++++++++++.+++|++
T Consensus         2 ~l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dls~~~~i~~~~~~i~~~~g~i   80 (241)
T d2a4ka1           2 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL-EAEAIAVVADVSDPKAVEAVFAEALEEFGRL   80 (241)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC-CSSEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-CCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Confidence            579999999999999999999999999999999999988777666655 4568899999999999999999999999999


Q ss_pred             cEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhHH
Q 021960          108 DILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKH  187 (305)
Q Consensus       108 d~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKa  187 (305)
                      |+||||||....    .++.+.+.++|++.+++|+.+++.++|.++|.|.+  .+.++++||. +..+.+++..|+++|+
T Consensus        81 DiLinnAg~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~--~~~i~~~ss~-a~~~~~~~~~Y~~sK~  153 (241)
T d2a4ka1          81 HGVAHFAGVAHS----ALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEE--GGSLVLTGSV-AGLGAFGLAHYAAGKL  153 (241)
T ss_dssp             CEEEEGGGGTTT----TC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCT--TCEEEEECCC-TTCCHHHHHHHHHCSS
T ss_pred             cEeccccccccc----cchhhhhcccccccccccccccccccccccccccc--ccceeecccc-ccccccCccccchhhH
Confidence            999999997643    67889999999999999999999999999998844  4555555554 4555578899999999


Q ss_pred             HHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCCH
Q 021960          188 AIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRS  267 (305)
Q Consensus       188 a~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (305)
                      |+++|+|+||+|++++||+||+|+||+++|+|....                  + ++..+.+.   +  ..|.+++.+|
T Consensus       154 al~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~------------------~-~~~~~~~~---~--~~p~~r~~~p  209 (241)
T d2a4ka1         154 GVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGL------------------P-PWAWEQEV---G--ASPLGRAGRP  209 (241)
T ss_dssp             HHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTS------------------C-HHHHHHHH---H--TSTTCSCBCH
T ss_pred             HHHHHHHHHHHHHhHhCCEEeeeccCcCCCHHHHhh------------------h-HhHHHHHH---h--CCCCCCCcCH
Confidence            999999999999999999999999999999986432                  1 22223222   2  3788999999


Q ss_pred             HHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          268 KDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       268 ~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      +|||+.+.||+|++++|+|||+|.+|||+++
T Consensus       210 ~dva~~v~fL~S~~s~~itG~~i~vDGG~s~  240 (241)
T d2a4ka1         210 EEVAQAALFLLSEESAYITGQALYVDGGRSI  240 (241)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESTTTTT
T ss_pred             HHHHHHHHHHhcchhCCCcCceEEeCCCccc
Confidence            9999999999999999999999999999975

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=2.1e-49  Score=344.87  Aligned_cols=252  Identities=29%  Similarity=0.399  Sum_probs=209.9

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCc-chhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVED-TLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~-~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      .|+||+||||||++|||+++|+.|+++|++|+++.++. ...+.+.+.+  .+.++.++.+|++|.++++++++++.+++
T Consensus         3 ~L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~   82 (259)
T d1ja9a_           3 PLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHF   82 (259)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHc
Confidence            58999999999999999999999999999999875544 3344444433  35578999999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEeccccccc-CCCCCccch
Q 021960          105 GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVM-GGLGPHAYT  183 (305)
Q Consensus       105 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~-~~~~~~~Y~  183 (305)
                      |.||++|||||....    .++.+.+.++|++.+++|+.++++++|.++|.|+++  +++++++|..+.. +.++...|+
T Consensus        83 g~idilinnag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~--g~~iii~s~~~~~~~~~~~~~Y~  156 (259)
T d1ja9a_          83 GGLDFVMSNSGMEVW----CDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG--GRIILTSSIAAVMTGIPNHALYA  156 (259)
T ss_dssp             SCEEEEECCCCCCCC----CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE--EEEEEECCGGGTCCSCCSCHHHH
T ss_pred             CCCcEEEeccccccc----cccccchHHHHHHHHhhccceeeeehhhhhhhhhcC--CcccccccccccccCCCCchhHH
Confidence            999999999998644    678889999999999999999999999999999554  5677776665544 688999999


Q ss_pred             hhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCC
Q 021960          184 ASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGT  263 (305)
Q Consensus       184 ~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (305)
                      ++|+|+++|+|+||+|++++|||||+|+||+++|+|..+.......      ......+.++..+.+..     ..|.+|
T Consensus       157 asK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~-----~~pl~R  225 (259)
T d1ja9a_         157 GSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAP------GGYKGMPQEKIDEGLAN-----MNPLKR  225 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTST------TCCTTCCHHHHHHHHHH-----TSTTSS
T ss_pred             HHHHHHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhhhhhh------hhcccCCHHHHHHHHHh-----CCCCCC
Confidence            9999999999999999999999999999999999997765433111      11122233333333222     378899


Q ss_pred             CCCHHHHHHHHHHhccCCCCceeccEEEecCCc
Q 021960          264 TLRSKDIAEAALYLASDESRYVSGHNLVVDGGV  296 (305)
Q Consensus       264 ~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~  296 (305)
                      +++|+|||+++.||||++++|+||++|.+|||.
T Consensus       226 ~g~p~eVa~~v~fL~S~~a~~itG~~i~vDGG~  258 (259)
T d1ja9a_         226 IGYPADIGRAVSALCQEESEWINGQVIKLTGGG  258 (259)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             CcCHHHHHHHHHHHhCchhcCCcCceEEeCCCC
Confidence            999999999999999999999999999999996

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=2.6e-48  Score=340.30  Aligned_cols=256  Identities=28%  Similarity=0.424  Sum_probs=211.9

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcc-hhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHH
Q 021960           26 HRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDT-LGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVS  102 (305)
Q Consensus        26 ~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~-~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~  102 (305)
                      ..+|+||++|||||++|||+++|+.|+++|++|++++++.. ..+.+.+.+  .+.++.++.+|++|+++++++++++.+
T Consensus        13 ~~sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~   92 (272)
T d1g0oa_          13 SASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVK   92 (272)
T ss_dssp             GGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHH
Confidence            45799999999999999999999999999999999987643 333333322  356799999999999999999999999


Q ss_pred             hcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEeccccccc-CCCCCcc
Q 021960          103 RYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVM-GGLGPHA  181 (305)
Q Consensus       103 ~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~-~~~~~~~  181 (305)
                      .+|++|++|||+|....    .++.+.+.++|++.+++|+.+++++++.+.|.|.+  .+++++++|..+.. +.++...
T Consensus        93 ~~g~idilV~nag~~~~----~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~--~g~~i~i~s~~~~~~~~~~~~~  166 (272)
T d1g0oa_          93 IFGKLDIVCSNSGVVSF----GHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEI--GGRLILMGSITGQAKAVPKHAV  166 (272)
T ss_dssp             HHSCCCEEEECCCCCCC----CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCT--TCEEEEECCGGGTCSSCSSCHH
T ss_pred             HhCCCCccccccccchh----hhhhhhhhhHHHHHhhhccceeeeecccccccccc--ccccccccccccccccccchhh
Confidence            99999999999997654    67888999999999999999999999999999954  47888888877654 5667788


Q ss_pred             chhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCC
Q 021960          182 YTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLK  261 (305)
Q Consensus       182 Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (305)
                      |+++|+|+++|+|++|.|++++|||||+|+||+++|+|....+.......+       ..+ ++.....   ...-..|.
T Consensus       167 Y~asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~-------~~~-~~~~~~~---~~~~~~Pl  235 (272)
T d1g0oa_         167 YSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGE-------NLS-NEEVDEY---AAVQWSPL  235 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCT-------TCC-HHHHHHH---HHHHSCTT
T ss_pred             HHHHHHHHHHHHHHHHHHhchhCeEEEEEccCCcCChHHHHHHHhhhhccc-------ccc-hHHHHHH---HHHccCCC
Confidence            999999999999999999999999999999999999997766543211100       111 1211111   11124788


Q ss_pred             CCCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          262 GTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       262 ~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      +|+++|+|||+.+.||+|++++|+||++|.+|||.++
T Consensus       236 gR~~~peevA~~v~fL~s~~s~~itG~~i~vDGG~~m  272 (272)
T d1g0oa_         236 RRVGLPIDIARVVCFLASNDGGWVTGKVIGIDGGACM  272 (272)
T ss_dssp             CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTCCC
T ss_pred             CCCcCHHHHHHHHHHHhCchhcCccCceEeECCCCCC
Confidence            9999999999999999999999999999999999863

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-48  Score=336.79  Aligned_cols=242  Identities=34%  Similarity=0.535  Sum_probs=207.1

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRL  107 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~i  107 (305)
                      +|+||++|||||++|||+++|+.|+++|++|++++|+++..+.+.+   ...+....+|+.+.+.++.    ..+.++.+
T Consensus         3 ~l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~---~~~~~~~~~d~~~~~~~~~----~~~~~~~i   75 (245)
T d2ag5a1           3 RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEK---YPGIQTRVLDVTKKKQIDQ----FANEVERL   75 (245)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGG---STTEEEEECCTTCHHHHHH----HHHHCSCC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh---ccCCceeeeeccccccccc----cccccccc
Confidence            4899999999999999999999999999999999999876655443   2347888999988766554    44556899


Q ss_pred             cEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccc-cCCCCCccchhhH
Q 021960          108 DILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGV-MGGLGPHAYTASK  186 (305)
Q Consensus       108 d~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~-~~~~~~~~Y~~sK  186 (305)
                      |+||||||....    .++.+.+.++|++.+++|+.+++.++|.+.|.|.+++.|+||++||..+. .+.++..+|+++|
T Consensus        76 d~lVn~ag~~~~----~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~~~~Y~~sK  151 (245)
T d2ag5a1          76 DVLFNVAGFVHH----GTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTK  151 (245)
T ss_dssp             SEEEECCCCCCC----BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCTTBHHHHHHH
T ss_pred             eeEEecccccCC----CChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhccCCccchhHHHHHH
Confidence            999999998754    67889999999999999999999999999999999999999999998775 5778889999999


Q ss_pred             HHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCC
Q 021960          187 HAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLR  266 (305)
Q Consensus       187 aa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (305)
                      +|+++|+|++|.|++++|||||+|+||+++|+|.++......             ..++..+.+..     ..|.+|+.+
T Consensus       152 aal~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~-------------~~~~~~~~~~~-----~~pl~R~~~  213 (245)
T d2ag5a1         152 AAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARG-------------NPEEARNDFLK-----RQKTGRFAT  213 (245)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSS-------------SHHHHHHHHHH-----TCTTSSCEE
T ss_pred             HHHHHHHHHHHHHhhhhCcEEEEEeeceeechhhHhhhhhhh-------------hhHHHHHHHHh-----cCCCCCCcC
Confidence            999999999999999999999999999999999765433211             11122222222     478999999


Q ss_pred             HHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          267 SKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       267 ~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      |||+|+.+.||+|++++|+|||+|.||||+++
T Consensus       214 pedva~~v~fL~s~~s~~iTG~~i~VDGG~sl  245 (245)
T d2ag5a1         214 AEEIAMLCVYLASDESAYVTGNPVIIDGGWSL  245 (245)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEECTTGGG
T ss_pred             HHHHHHHHHHHhChhhCCCcCceEEeCCCcCC
Confidence            99999999999999999999999999999985

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=100.00  E-value=2.8e-48  Score=333.64  Aligned_cols=227  Identities=26%  Similarity=0.304  Sum_probs=203.0

Q ss_pred             CEEEEecCCCchHHHHHHHHHHcCCe-------EEEEecCcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHH
Q 021960           32 KVAIITGGARGIGEAAVRLFARHGAK-------VVIADVEDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVS  102 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~g~~-------vv~~~r~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~  102 (305)
                      ++||||||++|||+++|+.|+++|++       |++++|+....+.+.+++  .+.++.++.||++|.++++++++++.+
T Consensus         2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (240)
T d2bd0a1           2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVE   81 (240)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            46899999999999999999999997       888999887776665544  356788999999999999999999999


Q ss_pred             hcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccc
Q 021960          103 RYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAY  182 (305)
Q Consensus       103 ~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y  182 (305)
                      ++|++|+||||||....    .++.+.+.++|++.+++|+.++++++|.++|+|++++.|+||++||.++..+.++...|
T Consensus        82 ~~g~iDilvnnAg~~~~----~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y  157 (240)
T d2bd0a1          82 RYGHIDCLVNNAGVGRF----GALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIY  157 (240)
T ss_dssp             HTSCCSEEEECCCCCCC----CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHH
T ss_pred             HcCCcceeecccccccC----CccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcCCCCCChHH
Confidence            99999999999998644    68899999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCC
Q 021960          183 TASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKG  262 (305)
Q Consensus       183 ~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (305)
                      +++|+|+.+|+|+|+.|++++||+||+|+||+++|+|..+..+.                                 ...
T Consensus       158 ~asK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~~~~~~---------------------------------~~~  204 (240)
T d2bd0a1         158 CMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDDE---------------------------------MQA  204 (240)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCST---------------------------------TGG
T ss_pred             HHHHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhhhcCHh---------------------------------hHh
Confidence            99999999999999999999999999999999999986433111                                 123


Q ss_pred             CCCCHHHHHHHHHHhccCCCCceeccE-EEecCC
Q 021960          263 TTLRSKDIAEAALYLASDESRYVSGHN-LVVDGG  295 (305)
Q Consensus       263 ~~~~~~dva~~v~~l~s~~~~~~tG~~-i~idgG  295 (305)
                      ++++|||+|+.++||+++..++++|++ +..+||
T Consensus       205 ~~~~PedvA~~v~~l~s~~~~~~~~~~~i~p~~G  238 (240)
T d2bd0a1         205 LMMMPEDIAAPVVQAYLQPSRTVVEEIILRPTSG  238 (240)
T ss_dssp             GSBCHHHHHHHHHHHHTSCTTEEEEEEEEEETTC
T ss_pred             cCCCHHHHHHHHHHHHcCCccCccCCEEEEecCC
Confidence            567899999999999999999988875 557776

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-47  Score=331.68  Aligned_cols=241  Identities=28%  Similarity=0.373  Sum_probs=205.4

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc----CCCCeEEEEecCCCHHHHHHHHHHHHH
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL----APAPVTFVHCDVSLEEDIENLINSTVS  102 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~----~~~~v~~~~~D~~d~~~i~~~~~~~~~  102 (305)
                      .+|+||++|||||++|||+++|+.|+++|++|++++|++...+.+.+++    .+.++.++.||++|+++++++++++.+
T Consensus         6 ~~lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~   85 (257)
T d1xg5a_           6 ERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRS   85 (257)
T ss_dssp             GGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            3589999999999999999999999999999999999987776665544    235788999999999999999999999


Q ss_pred             hcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC--CCEEEEecccccccC--CCC
Q 021960          103 RYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRG--GGCIISTASVAGVMG--GLG  178 (305)
Q Consensus       103 ~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~~~iv~isS~~~~~~--~~~  178 (305)
                      ++|+||+||||||....    +++.+++.++|++.+++|+.+++++++.++|.|.+++  +|+||++||.++...  .+.
T Consensus        86 ~~g~iD~lVnnAg~~~~----~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~p~~~  161 (257)
T d1xg5a_          86 QHSGVDICINNAGLARP----DTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSV  161 (257)
T ss_dssp             HHCCCSEEEECCCCCCC----CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCGG
T ss_pred             hcCCCCEEEecccccCC----CccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCCCCcc
Confidence            99999999999998654    6888999999999999999999999999999987654  689999999998754  445


Q ss_pred             CccchhhHHHHHHHHHHHHHHH--CcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhh
Q 021960          179 PHAYTASKHAIVGLTKNAACEL--GRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSG  256 (305)
Q Consensus       179 ~~~Y~~sKaa~~~~~~~la~e~--~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (305)
                      ...|+++|+++.+|+|+|+.|+  +++||+||+|+||+++|++.....+..                   .+...   . 
T Consensus       162 ~~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~~~~~~~-------------------~~~~~---~-  218 (257)
T d1xg5a_         162 THFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKD-------------------PEKAA---A-  218 (257)
T ss_dssp             GHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTC-------------------HHHHH---H-
T ss_pred             cHHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhhhcChhh-------------------HHHHH---h-
Confidence            6779999999999999999998  788999999999999999976553320                   01111   1 


Q ss_pred             cCCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCC
Q 021960          257 LGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGG  295 (305)
Q Consensus       257 ~~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG  295 (305)
                       ..+.+++++|||||+.++||+|++++|+|||++..++|
T Consensus       219 -~~~~~r~~~pedvA~~v~fL~s~~a~~itG~i~i~~~g  256 (257)
T d1xg5a_         219 -TYEQMKCLKPEDVAEAVIYVLSTPAHIQIGDIQMRPTG  256 (257)
T ss_dssp             -HHC---CBCHHHHHHHHHHHHHSCTTEEEEEEEEEETT
T ss_pred             -cCCCCCCcCHHHHHHHHHHHhCChhcCeECCEEEEeCC
Confidence             14678899999999999999999999999998665555

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.5e-49  Score=339.94  Aligned_cols=240  Identities=30%  Similarity=0.440  Sum_probs=201.4

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc----CCCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           29 LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL----APAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        29 l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~----~~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      .+||++|||||++|||+++|+.|+++|++|++++|+.+..+...+.+    .+.++.++.||++|.++++++++++.+++
T Consensus         1 i~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (254)
T d2gdza1           1 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF   80 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHc
Confidence            37999999999999999999999999999999999987766555443    34578999999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC---CCEEEEecccccccCCCCCcc
Q 021960          105 GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRG---GGCIISTASVAGVMGGLGPHA  181 (305)
Q Consensus       105 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~---~~~iv~isS~~~~~~~~~~~~  181 (305)
                      |+||+||||||....            ++|++.+++|+.+++++++.++|.|.++.   .|+||++||.++..+.++...
T Consensus        81 G~iDilVnnAg~~~~------------~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~~~~~~~  148 (254)
T d2gdza1          81 GRLDILVNNAGVNNE------------KNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPV  148 (254)
T ss_dssp             SCCCEEEECCCCCCS------------SSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTCHH
T ss_pred             CCcCeeccccccccc------------ccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccCCCCccc
Confidence            999999999997532            34788999999999999999999997654   488999999999999999999


Q ss_pred             chhhHHHHHHHHHH--HHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCC
Q 021960          182 YTASKHAIVGLTKN--AACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGN  259 (305)
Q Consensus       182 Y~~sKaa~~~~~~~--la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (305)
                      |++||+|+.+|+|+  |+.|++++|||||+|+||+|+|+|....+....        ....   .+..+.+..     ..
T Consensus       149 Y~asKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~--------~~~~---~~~~~~~~~-----~~  212 (254)
T d2gdza1         149 YCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEEN--------MGQY---IEYKDHIKD-----MI  212 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHH--------HGGG---GGGHHHHHH-----HH
T ss_pred             hHHHHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChhhhhcccccc--------cccc---HHHHHHHHh-----cC
Confidence            99999999999997  788999999999999999999999765432200        0000   011111111     13


Q ss_pred             CCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          260 LKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       260 ~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      |.+++++|||||+.++||+|++  ++|||+|.||||.++
T Consensus       213 p~~r~~~pedvA~~v~fL~s~~--~itG~~i~VdGG~~~  249 (254)
T d2gdza1         213 KYYGILDPPLIANGLITLIEDD--ALNGAIMKITTSKGI  249 (254)
T ss_dssp             HHHCCBCHHHHHHHHHHHHHCT--TCSSCEEEEETTTEE
T ss_pred             CCCCCcCHHHHHHHHHHHHcCC--CCCCCEEEECCCCee
Confidence            5578899999999999999975  599999999999865

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=2.6e-48  Score=344.38  Aligned_cols=232  Identities=26%  Similarity=0.406  Sum_probs=200.0

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcc---------hhhhHhhhcCCCCeEEEEecCCCHHHHHHHH
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDT---------LGSVLASTLAPAPVTFVHCDVSLEEDIENLI   97 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~---------~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~   97 (305)
                      ++|+||++|||||++|||+++|+.|+++|++|++.+++..         ..+.+.+.+. .+.....+|++|.+++++++
T Consensus         3 m~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~v   81 (302)
T d1gz6a_           3 LRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIR-RRGGKAVANYDSVEAGEKLV   81 (302)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHH-HTTCEEEEECCCGGGHHHHH
T ss_pred             cCcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHh-hcccccccccchHHHHHHHH
Confidence            4689999999999999999999999999999999876532         1222222221 22456778999999999999


Q ss_pred             HHHHHhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCC
Q 021960           98 NSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGL  177 (305)
Q Consensus        98 ~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~  177 (305)
                      +++.+++|+||+||||||....    .++.+++.++|++.+++|+.++++++|.++|.|++++.|+||++||.++..+.+
T Consensus        82 ~~~~~~~G~iDiLVnNAGi~~~----~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~~~~~  157 (302)
T d1gz6a_          82 KTALDTFGRIDVVVNNAGILRD----RSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNF  157 (302)
T ss_dssp             HHHHHHTSCCCEEEECCCCCCC----CCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT
T ss_pred             HHHHHHcCCCCEEEECCccCCC----CChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhcCCCC
Confidence            9999999999999999998754    689999999999999999999999999999999999999999999999999999


Q ss_pred             CCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhc
Q 021960          178 GPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGL  257 (305)
Q Consensus       178 ~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (305)
                      +...|++||+|+.+|+|+|+.|++++||+||+|+||++.|++....                  + ++            
T Consensus       158 ~~~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~~~~~------------------~-~~------------  206 (302)
T d1gz6a_         158 GQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTETVM------------------P-ED------------  206 (302)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTGGGS------------------C-HH------------
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcchhhcC------------------c-Hh------------
Confidence            9999999999999999999999999999999999999988763221                  0 10            


Q ss_pred             CCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          258 GNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       258 ~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                         ..+.++|||||+.++||||+.+ ++||++|.+|||+..
T Consensus       207 ---~~~~~~PedvA~~v~fL~S~~a-~itG~~i~vdGG~~~  243 (302)
T d1gz6a_         207 ---LVEALKPEYVAPLVLWLCHESC-EENGGLFEVGAGWIG  243 (302)
T ss_dssp             ---HHHHSCGGGTHHHHHHHTSTTC-CCCSCEEEEETTEEE
T ss_pred             ---hHhcCCHHHHHHHHHHHcCCCc-CCCCcEEEeCCCcee
Confidence               1233479999999999999875 789999999999754

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=100.00  E-value=1.5e-46  Score=332.67  Aligned_cols=247  Identities=22%  Similarity=0.346  Sum_probs=209.0

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc---CCCCeEEEEecCCCHHHHHHHHHHHHHh
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL---APAPVTFVHCDVSLEEDIENLINSTVSR  103 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~---~~~~v~~~~~D~~d~~~i~~~~~~~~~~  103 (305)
                      .+|+||++|||||++|||+++|+.|+++|++|++++|+....+...+.+   .+.++.++.+|++|.++++++++.+.+.
T Consensus        21 ~~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~  100 (294)
T d1w6ua_          21 NSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKV  100 (294)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhh
Confidence            3899999999999999999999999999999999999987765544433   2566889999999999999999999999


Q ss_pred             cCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHc-CCCCEEEEecccccccCCCCCccc
Q 021960          104 YGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMIN-RGGGCIISTASVAGVMGGLGPHAY  182 (305)
Q Consensus       104 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~~iv~isS~~~~~~~~~~~~Y  182 (305)
                      ++++|+||||||....    .++.+.+.+++++.+.+|+.+.+.+.+...+.+.. +..+.+++++|..+..+.++...|
T Consensus       101 ~g~iDilvnnAg~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~~~~~~~Y  176 (294)
T d1w6ua_         101 AGHPNIVINNAAGNFI----SPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPS  176 (294)
T ss_dssp             TCSCSEEEECCCCCCC----SCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTCHHH
T ss_pred             ccccchhhhhhhhccc----cccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhcccccchH
Confidence            9999999999998654    57788899999999999999999998887666654 456778889999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCC
Q 021960          183 TASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKG  262 (305)
Q Consensus       183 ~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (305)
                      +++|+|+++|+|++|.|++++|||||+|+||+|+|++..+.+...                ++..+.   ...  ..|.+
T Consensus       177 sasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~----------------~~~~~~---~~~--~~pl~  235 (294)
T d1w6ua_         177 ASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPT----------------GTFEKE---MIG--RIPCG  235 (294)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTT----------------SHHHHH---HHT--TCTTS
T ss_pred             HHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhccCCc----------------HHHHHH---Hhh--cCCCC
Confidence            999999999999999999999999999999999999865543221                111111   122  36889


Q ss_pred             CCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          263 TTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       263 ~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      ++++|||||+.+.||||++++|+||++|.+|||.++
T Consensus       236 R~~~pediA~~v~fL~sd~s~~itG~~i~vDGG~~l  271 (294)
T d1w6ua_         236 RLGTVEELANLAAFLCSDYASWINGAVIKFDGGEEV  271 (294)
T ss_dssp             SCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTHHH
T ss_pred             CCCCHHHHHHHHHHHhCchhcCCCCcEEEECCChhh
Confidence            999999999999999999999999999999999764

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.3e-44  Score=314.52  Aligned_cols=242  Identities=21%  Similarity=0.233  Sum_probs=204.7

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHH---cCCeEEEEecCcchhhhHhhhc----CCCCeEEEEecCCCHHHHHHHHHHH
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFAR---HGAKVVIADVEDTLGSVLASTL----APAPVTFVHCDVSLEEDIENLINST  100 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~---~g~~vv~~~r~~~~~~~~~~~~----~~~~v~~~~~D~~d~~~i~~~~~~~  100 (305)
                      .|+||++|||||++|||+++|++|++   +|++|++++|++...+.+.+++    .+.++.++.||++|+++++++++.+
T Consensus         3 ~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~   82 (259)
T d1oaaa_           3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAV   82 (259)
T ss_dssp             CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHH
Confidence            57899999999999999999999996   7999999999988777665544    3557899999999999999999988


Q ss_pred             HHh----cCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC--CCEEEEeccccccc
Q 021960          101 VSR----YGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRG--GGCIISTASVAGVM  174 (305)
Q Consensus       101 ~~~----~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~~~iv~isS~~~~~  174 (305)
                      .+.    ++.+|++|||||..... ...++.+.+.++|++++++|+.++++++|.++|+|.+++  .++||++||.++..
T Consensus        83 ~~~~~~~~~~~~~lvnnag~~~~~-~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~  161 (259)
T d1oaaa_          83 RELPRPEGLQRLLLINNAATLGDV-SKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQ  161 (259)
T ss_dssp             HHSCCCTTCCEEEEEECCCCCCCC-SSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTS
T ss_pred             HHhhhhccCceEEEEecccccccC-CCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccccC
Confidence            763    45789999999976532 235678899999999999999999999999999998765  57999999999999


Q ss_pred             CCCCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHH
Q 021960          175 GGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFV  254 (305)
Q Consensus       175 ~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (305)
                      +.+++..|++||+|+++|+|+|+.|  .+||+||+|+||+|+|+|....+.....              ++..+.+... 
T Consensus       162 ~~~~~~~Y~asKaal~~lt~~la~e--~~gIrVn~v~PG~i~T~~~~~~~~~~~~--------------~~~~~~~~~~-  224 (259)
T d1oaaa_         162 PYKGWGLYCAGKAARDMLYQVLAAE--EPSVRVLSYAPGPLDNDMQQLARETSKD--------------PELRSKLQKL-  224 (259)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHH--CTTEEEEEEECCSBSSHHHHHHHHHCSC--------------HHHHHHHHHH-
T ss_pred             CCccchHHHHHHHHHHHHHHHHHhC--CCCCEEEEEEcCCCCCHHHHHhhhcCCC--------------HHHHHHHHhc-
Confidence            9999999999999999999999999  6799999999999999997655433111              1222222221 


Q ss_pred             hhcCCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEe
Q 021960          255 SGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVV  292 (305)
Q Consensus       255 ~~~~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~i  292 (305)
                          .+.+++.+|+|+|+.++||+++ .+|+||++|.+
T Consensus       225 ----~~~~r~~~p~evA~~i~~ll~~-~s~~TG~~idv  257 (259)
T d1oaaa_         225 ----KSDGALVDCGTSAQKLLGLLQK-DTFQSGAHVDF  257 (259)
T ss_dssp             ----HHTTCSBCHHHHHHHHHHHHHH-CCSCTTEEEET
T ss_pred             ----CCCCCCCCHHHHHHHHHHHhhh-ccCCCCCeEEe
Confidence                3467889999999999999986 46999999986

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=100.00  E-value=2.5e-44  Score=311.38  Aligned_cols=237  Identities=22%  Similarity=0.222  Sum_probs=194.3

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhh---hcCCCCeEEEEecCC-CHHHHHHHHHHHHH
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLAS---TLAPAPVTFVHCDVS-LEEDIENLINSTVS  102 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~---~~~~~~v~~~~~D~~-d~~~i~~~~~~~~~  102 (305)
                      ++|+||+||||||++|||+++|++|+++|++|++++|+.+..+...+   ...+.++.++.+|++ +.++++++++++.+
T Consensus         1 m~l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~   80 (254)
T d1sbya1           1 MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFD   80 (254)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHH
Confidence            36899999999999999999999999999999988776655443332   234567999999998 77899999999999


Q ss_pred             hcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC---CCCEEEEecccccccCCCCC
Q 021960          103 RYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINR---GGGCIISTASVAGVMGGLGP  179 (305)
Q Consensus       103 ~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~---~~~~iv~isS~~~~~~~~~~  179 (305)
                      ++|+||+||||||..            +.+.|++++++|+.+++++++.++|.|.++   ..|+||++||.++..+.+++
T Consensus        81 ~~g~iDilvnnAG~~------------~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~~~~~  148 (254)
T d1sbya1          81 QLKTVDILINGAGIL------------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQV  148 (254)
T ss_dssp             HHSCCCEEEECCCCC------------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTS
T ss_pred             HcCCCCEEEeCCCCC------------CHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccCCCCC
Confidence            999999999999964            346689999999999999999999999765   35899999999999999999


Q ss_pred             ccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCC
Q 021960          180 HAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGN  259 (305)
Q Consensus       180 ~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (305)
                      ..|+++|+|+.+|+++|+.|++++||+||+|+||+|+|+|..........            .  .   .+...     .
T Consensus       149 ~~Y~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~~~~~~~~~~~~------------~--~---~~~~~-----~  206 (254)
T d1sbya1         149 PVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDV------------E--P---RVAEL-----L  206 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGS------------C--T---THHHH-----H
T ss_pred             HHHHHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCccccccccchhH------------H--H---HHHhc-----c
Confidence            99999999999999999999999999999999999999985432111000            0  0   01110     1


Q ss_pred             CCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCccccc
Q 021960          260 LKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTSR  300 (305)
Q Consensus       260 ~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~~  300 (305)
                      ...+..+||++|+.++++.+..   .||++|.+|||.....
T Consensus       207 ~~~~~~~~e~va~~~~~~~~~~---~tG~vi~vdgG~l~~~  244 (254)
T d1sbya1         207 LSHPTQTSEQCGQNFVKAIEAN---KNGAIWKLDLGTLEAI  244 (254)
T ss_dssp             TTSCCEEHHHHHHHHHHHHHHC---CTTCEEEEETTEEEEC
T ss_pred             ccCCCCCHHHHHHHHHHhhhCC---CCCCEEEECCCEeCcc
Confidence            1234558999999998887643   5999999999974433

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.1e-43  Score=308.27  Aligned_cols=248  Identities=19%  Similarity=0.236  Sum_probs=207.8

Q ss_pred             CCCCCEEEEecCCC--chHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc-CCCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           28 RLEGKVAIITGGAR--GIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL-APAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        28 ~l~~k~vlVtGas~--giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~-~~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      .|+||++|||||++  |||+++|+.|+++|++|++++|+++..+...+.. ...+...+.+|+++..++...++++.+.+
T Consensus         2 ~L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (258)
T d1qsga_           2 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVW   81 (258)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTC
T ss_pred             cCCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhcc
Confidence            47899999999998  8999999999999999999999877655444333 23456778899999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCC-CcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccch
Q 021960          105 GRLDILYNNAGVLGNQRKH-KSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYT  183 (305)
Q Consensus       105 g~id~li~nag~~~~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~  183 (305)
                      +++|++|||++........ ....+...+.+...+++|+.+.+.+.+.+.+.+  ++++.|+++||..+..+.+....|+
T Consensus        82 ~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~Ii~iss~~~~~~~~~~~~Y~  159 (258)
T d1qsga_          82 PKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSML--NPGSALLTLSYLGAERAIPNYNVMG  159 (258)
T ss_dssp             SSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGE--EEEEEEEEEECGGGTSBCTTTTHHH
T ss_pred             cccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhc--cCCcEEEEecchhhccCCCCcHHHH
Confidence            9999999999876443211 223356778899999999999999999998877  3456799999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCC
Q 021960          184 ASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGT  263 (305)
Q Consensus       184 ~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (305)
                      ++|+|+++|+|++|.|++++|||||+|+||+|+|+|....+..                 +...+...   .  ..|.+|
T Consensus       160 ~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~-----------------~~~~~~~~---~--~~pl~R  217 (258)
T d1qsga_         160 LAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDF-----------------RKMLAHCE---A--VTPIRR  217 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTH-----------------HHHHHHHH---H--HSTTSS
T ss_pred             HHHHHHHHHHHHHHHHhCccCceeecccccccccccccccchh-----------------hhHHHHHH---h--CCCCCC
Confidence            9999999999999999999999999999999999986543211                 11112221   2  268899


Q ss_pred             CCCHHHHHHHHHHhccCCCCceeccEEEecCCcccc
Q 021960          264 TLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTS  299 (305)
Q Consensus       264 ~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~  299 (305)
                      +++|||+|+.+.||+|++++|+||++|.+|||+++.
T Consensus       218 ~~~peeia~~v~fL~s~~s~~itG~~i~vDGG~~i~  253 (258)
T d1qsga_         218 TVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGFSIA  253 (258)
T ss_dssp             CCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGGB
T ss_pred             CcCHHHHHHHHHHHhCchhcCccCceEEECcCHHHh
Confidence            999999999999999999999999999999999865

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.2e-43  Score=303.02  Aligned_cols=238  Identities=29%  Similarity=0.400  Sum_probs=200.3

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRL  107 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~i  107 (305)
                      +|+||++|||||++|||+++|++|+++|++|++++|+++..+...+.+. .+.....+|+.+.+.++...+.+....+.+
T Consensus         2 slkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (248)
T d2o23a1           2 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLG-NNCVFAPADVTSEKDVQTALALAKGKFGRV   80 (248)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHC-TTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhC-CCcccccccccccccccccccccccccccc
Confidence            6899999999999999999999999999999999999888777766653 458889999999999999999999998999


Q ss_pred             cEEEEcCCCCCCCC--CCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC------CCCEEEEecccccccCCCCC
Q 021960          108 DILYNNAGVLGNQR--KHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINR------GGGCIISTASVAGVMGGLGP  179 (305)
Q Consensus       108 d~li~nag~~~~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~------~~~~iv~isS~~~~~~~~~~  179 (305)
                      |.+++|++......  ...++.+.+.++|++.+++|+.+++++++++.|.|..+      +.|+||++||..+..+.++.
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~~~  160 (248)
T d2o23a1          81 DVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQ  160 (248)
T ss_dssp             CEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCTTC
T ss_pred             cccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhccCCCCc
Confidence            99999987654322  12455677899999999999999999999999998643      56899999999999999999


Q ss_pred             ccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCC
Q 021960          180 HAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGN  259 (305)
Q Consensus       180 ~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (305)
                      ..|+++|+|+++|+|+|++|++++||+||+|+||+++|+|..+..+.                   ..+..   ..  ..
T Consensus       161 ~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~~~~~~-------------------~~~~~---~~--~~  216 (248)
T d2o23a1         161 AAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEK-------------------VCNFL---AS--QV  216 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC-----------------------------CHH---HH--TC
T ss_pred             hHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhhcCCHH-------------------HHHHH---Hh--cC
Confidence            99999999999999999999999999999999999999986543221                   11111   11  24


Q ss_pred             C-CCCCCCHHHHHHHHHHhccCCCCceeccEEEe
Q 021960          260 L-KGTTLRSKDIAEAALYLASDESRYVSGHNLVV  292 (305)
Q Consensus       260 ~-~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~i  292 (305)
                      | .+|+++|||||+.+.||++  ++|+|||+|.|
T Consensus       217 pl~~R~g~peevA~~v~fL~s--~~~itGq~I~v  248 (248)
T d2o23a1         217 PFPSRLGDPAEYAHLVQAIIE--NPFLNGEVIRL  248 (248)
T ss_dssp             SSSCSCBCHHHHHHHHHHHHH--CTTCCSCEEEE
T ss_pred             CCCCCCcCHHHHHHHHHHHHh--CCCCCceEeEC
Confidence            4 4889999999999999997  47999999976

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.1e-44  Score=306.42  Aligned_cols=219  Identities=27%  Similarity=0.334  Sum_probs=193.5

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHh
Q 021960           26 HRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSR  103 (305)
Q Consensus        26 ~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~  103 (305)
                      +.+++||++|||||++|||+++|++|+++|++|++++|+.+..+.+.+.+  .+.++.++.||++|.++++++++++.++
T Consensus         2 ~~~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~   81 (244)
T d1yb1a_           2 RKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAE   81 (244)
T ss_dssp             CCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Confidence            34789999999999999999999999999999999999988777666554  4567999999999999999999999999


Q ss_pred             cCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccch
Q 021960          104 YGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYT  183 (305)
Q Consensus       104 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~  183 (305)
                      +|.+|++|||||....    ..+.+.+.+.|++++++|+.+++++++.++|.|.+++.|+||++||..+..+.++++.|+
T Consensus        82 ~g~idilinnag~~~~----~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~  157 (244)
T d1yb1a_          82 IGDVSILVNNAGVVYT----SDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYC  157 (244)
T ss_dssp             TCCCSEEEECCCCCCC----CCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHHHHHHH
T ss_pred             cCCCceeEeecccccc----ccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcCCCCCcHHHH
Confidence            9999999999998755    567788999999999999999999999999999999999999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHCc---CCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCC
Q 021960          184 ASKHAIVGLTKNAACELGR---YGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNL  260 (305)
Q Consensus       184 ~sKaa~~~~~~~la~e~~~---~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (305)
                      +||+|+.+|+++|+.|+++   +||+|++|+||+|+|+|.++..                                  .+
T Consensus       158 asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~~~~----------------------------------~~  203 (244)
T d1yb1a_         158 SSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNPS----------------------------------TS  203 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCTH----------------------------------HH
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhhCcC----------------------------------cc
Confidence            9999999999999999875   5899999999999999854210                                  11


Q ss_pred             CCCCCCHHHHHHHHHHhccCCC
Q 021960          261 KGTTLRSKDIAEAALYLASDES  282 (305)
Q Consensus       261 ~~~~~~~~dva~~v~~l~s~~~  282 (305)
                      .++..+||++|+.+...+..+.
T Consensus       204 ~~~~~~pe~va~~i~~~~~~~~  225 (244)
T d1yb1a_         204 LGPTLEPEEVVNRLMHGILTEQ  225 (244)
T ss_dssp             HCCCCCHHHHHHHHHHHHHTTC
T ss_pred             ccCCCCHHHHHHHHHHHHhcCC
Confidence            2456689999999988765543

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=100.00  E-value=9.1e-43  Score=306.42  Aligned_cols=239  Identities=25%  Similarity=0.310  Sum_probs=187.4

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEEecCcch-hhhHhhhc---CCCCe-----------------EEEEecCCCHH
Q 021960           33 VAIITGGARGIGEAAVRLFARHGAKVVIADVEDTL-GSVLASTL---APAPV-----------------TFVHCDVSLEE   91 (305)
Q Consensus        33 ~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~-~~~~~~~~---~~~~v-----------------~~~~~D~~d~~   91 (305)
                      ++|||||++|||+++|+.|+++|++|++++++... .+.+.+.+   .+...                 ....+|+++.+
T Consensus         4 VAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~~~   83 (284)
T d1e7wa_           4 VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLFT   83 (284)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHHH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCCHH
Confidence            78999999999999999999999999998765433 33332222   12223                 34556799999


Q ss_pred             HHHHHHHHHHHhcCCccEEEEcCCCCCCCCCCCcccCCCHHH--------------HHHHHHHHhHHHHHHHHHHHHHHH
Q 021960           92 DIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADE--------------FDNVMRVNVKGMALGIKHAARVMI  157 (305)
Q Consensus        92 ~i~~~~~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~--------------~~~~~~~n~~~~~~l~~~~~~~~~  157 (305)
                      +++++++++.+++|+||+||||||....    .++.+.+.++              +...+.+|+.+++++.+.+.+.+.
T Consensus        84 ~v~~~~~~~~~~~G~iDiLVnnAG~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~  159 (284)
T d1e7wa_          84 RCAELVAACYTHWGRCDVLVNNASSFYP----TPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVA  159 (284)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCCC----CCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCCEEEecCCccCC----CchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhh
Confidence            9999999999999999999999998754    3444444433              445789999999999999887653


Q ss_pred             ------cCCCCEEEEecccccccCCCCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCc
Q 021960          158 ------NRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGE  231 (305)
Q Consensus       158 ------~~~~~~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~  231 (305)
                            +.+.++|++++|.....+.++...|+++|+|+.+|+|++|+|++++||+||+|+||++.+....          
T Consensus       160 ~~~~~~~~~~~~ii~~~s~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~~~~~~----------  229 (284)
T d1e7wa_         160 GTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDM----------  229 (284)
T ss_dssp             TSCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGGGS----------
T ss_pred             hhHHHhcCCCCcccccccccccCCccceeeeccccccchhhhHHHHHHhCCccccccccccccccccccC----------
Confidence                  3356789999999999999999999999999999999999999999999999999986553210          


Q ss_pred             hhhhhhccCCCcHHHHHHHHHHHhhcCCC-CCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCcccccc
Q 021960          232 EEDECMNFGIPSQKEVRKMEEFVSGLGNL-KGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTSRN  301 (305)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~~~  301 (305)
                                + ++..+.   +...  .| .+|+.+|||||+.++||+|++++|+|||+|.+|||++++|.
T Consensus       230 ----------~-~~~~~~---~~~~--~pl~~R~~~peeiA~~v~fL~S~~s~~itG~~i~VDGG~sl~r~  284 (284)
T d1e7wa_         230 ----------P-PAVWEG---HRSK--VPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLTRA  284 (284)
T ss_dssp             ----------C-HHHHHH---HHTT--CTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCCC
T ss_pred             ----------C-HHHHHH---HHhc--CCCCCCCCCHHHHHHHHHHHhCchhcCccCCeEEECcChhccCc
Confidence                      1 122222   2222  34 58999999999999999999999999999999999998763

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=9e-43  Score=312.85  Aligned_cols=264  Identities=19%  Similarity=0.234  Sum_probs=196.3

Q ss_pred             CCCEEEEec--CCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc----------C----CCCeEEE----------
Q 021960           30 EGKVAIITG--GARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL----------A----PAPVTFV----------   83 (305)
Q Consensus        30 ~~k~vlVtG--as~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~----------~----~~~v~~~----------   83 (305)
                      ++|++||||  +++|||+++|+.|+++|++|++.++............          .    .......          
T Consensus         1 n~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (329)
T d1uh5a_           1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN   80 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGG
T ss_pred             CCcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhc
Confidence            479999999  6689999999999999999999887654322211100          0    0111222          


Q ss_pred             ----------EecCCCHHHHHHHHHHHHHhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHH
Q 021960           84 ----------HCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAA  153 (305)
Q Consensus        84 ----------~~D~~d~~~i~~~~~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~  153 (305)
                                .+|+++.++++.+++++.+.+|+||+||||||......  .++.++++++|++.+++|+.+++.++|+++
T Consensus        81 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~--~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~  158 (329)
T d1uh5a_          81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQ--KDLLNTSRKGYLDALSKSSYSLISLCKYFV  158 (329)
T ss_dssp             GCCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTT--SCGGGCCHHHHHHHHHHHTHHHHHHHHHHG
T ss_pred             ccchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccC--CChhhhhhhhhhhhcccchhHHHHHHHHHH
Confidence                      24667888899999999999999999999999765432  578899999999999999999999999999


Q ss_pred             HHHHcCCCCEEEEecccccccCCCC-CccchhhHHHHHHHHHHHHHHHCc-CCcEEEEEeCCccccccchhccc------
Q 021960          154 RVMINRGGGCIISTASVAGVMGGLG-PHAYTASKHAIVGLTKNAACELGR-YGIRVNCISPFGVATSMLVNAWR------  225 (305)
Q Consensus       154 ~~~~~~~~~~iv~isS~~~~~~~~~-~~~Y~~sKaa~~~~~~~la~e~~~-~~i~v~~v~PG~v~T~~~~~~~~------  225 (305)
                      |+|.  ..|+||++||.++..+.|+ ...|+++|+++++|+|+||.|+++ +|||||+|+||+|+|++....-.      
T Consensus       159 ~~m~--~~GsIv~iss~~~~~~~p~y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~T~a~~~i~g~~~~~~  236 (329)
T d1uh5a_         159 NIMK--PQSSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYE  236 (329)
T ss_dssp             GGEE--EEEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCTTGGGCC-------
T ss_pred             hhcc--cccccccceeehhcccccccchhhhhhhccccccchhhHHHHhcccCcEEEEEecCcccchhhhcccchhhhhh
Confidence            9994  3589999999999998886 567999999999999999999986 69999999999999964332100      


Q ss_pred             CCC----------------CCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHHhccCCCCceeccE
Q 021960          226 NSG----------------DGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHN  289 (305)
Q Consensus       226 ~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~  289 (305)
                      ...                ...................+...+.... ..|.+|+++|||||..++||+|+.++|+|||+
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Pl~R~~~pedvA~~v~fLaSd~s~~iTGq~  315 (329)
T d1uh5a_         237 NNTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEK-YAPLRQKLLSTDIGSVASFLLSRESRAITGQT  315 (329)
T ss_dssp             -----------------------------------CHHHHHHHHHHH-HSSSCSCCCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             hhhhhhhccccccccccccccccccchhhhhhhcccchHHHHHHHhc-cCCCCCCcCHHHHHHHHHHHhCchhCCccCCe
Confidence            000                0000000000001111111222222222 37899999999999999999999999999999


Q ss_pred             EEecCCccc
Q 021960          290 LVVDGGVTT  298 (305)
Q Consensus       290 i~idgG~~~  298 (305)
                      |.+|||+++
T Consensus       316 i~VDGG~~~  324 (329)
T d1uh5a_         316 IYVDNGLNI  324 (329)
T ss_dssp             EEESTTGGG
T ss_pred             EEECCCccc
Confidence            999999965

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=6e-42  Score=294.07  Aligned_cols=233  Identities=27%  Similarity=0.341  Sum_probs=193.7

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEE
Q 021960           31 GKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDIL  110 (305)
Q Consensus        31 ~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~l  110 (305)
                      +|++|||||++|||+++|+.|+++|++|++++|+++..          +.....+|+++...+..+.+...+.. ..+.+
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~----------~~~~~~~d~~~~~~~~~~~~~~~~~~-~~~~~   69 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRREGE----------DLIYVEGDVTREEDVRRAVARAQEEA-PLFAV   69 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCSS----------SSEEEECCTTCHHHHHHHHHHHHHHS-CEEEE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcccc----------cceEeeccccchhhhHHHHHhhhccc-cccch
Confidence            58999999999999999999999999999999986532          35668899999999999888877665 45666


Q ss_pred             EEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHH------HHcCCCCEEEEecccccccCCCCCccchh
Q 021960          111 YNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARV------MINRGGGCIISTASVAGVMGGLGPHAYTA  184 (305)
Q Consensus       111 i~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~------~~~~~~~~iv~isS~~~~~~~~~~~~Y~~  184 (305)
                      +++++..............+.+.+++.+++|+.+.+.+++.+.+.      |.+++.|+||++||..+..+.++...|++
T Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~~~~~Y~a  149 (241)
T d1uaya_          70 VSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAA  149 (241)
T ss_dssp             EECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTCHHHHH
T ss_pred             hhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccCCCCchhhHH
Confidence            667665544333345566788999999999999999999999888      44556799999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCC
Q 021960          185 SKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT  264 (305)
Q Consensus       185 sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (305)
                      +|+|+++|+|++|.|++++|||||+|+||+++|++.......                   ..   ...... ..+.+|+
T Consensus       150 sKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~-------------------~~---~~~~~~-~~~~~R~  206 (241)
T d1uaya_         150 SKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPEK-------------------AK---ASLAAQ-VPFPPRL  206 (241)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSCHH-------------------HH---HHHHTT-CCSSCSC
T ss_pred             HHHHHHHHHHHHHHHHhhcCCceeeecCCcccccccchhhhh-------------------HH---HHHHhc-CCCCCCC
Confidence            999999999999999999999999999999999986543211                   11   111222 2345899


Q ss_pred             CCHHHHHHHHHHhccCCCCceeccEEEecCCcccc
Q 021960          265 LRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTS  299 (305)
Q Consensus       265 ~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~  299 (305)
                      ++|||||+.+.||+|  ++|+|||+|.+|||+++.
T Consensus       207 g~pedvA~~v~fL~s--~~~iTG~~i~VDGG~~m~  239 (241)
T d1uaya_         207 GRPEEYAALVLHILE--NPMLNGEVVRLDGALRMA  239 (241)
T ss_dssp             CCHHHHHHHHHHHHH--CTTCCSCEEEESTTCCCC
T ss_pred             cCHHHHHHHHHHHHh--CCCCCCCEEEECCcccCC
Confidence            999999999999998  469999999999999865

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.1e-42  Score=304.22  Aligned_cols=246  Identities=23%  Similarity=0.279  Sum_probs=188.6

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHcCCeEEEE---ecCcchhhhHh---hhc--CCCCeEEEEecCCCHHHHHHHHHHHHH
Q 021960           31 GKVAIITGGARGIGEAAVRLFARHGAKVVIA---DVEDTLGSVLA---STL--APAPVTFVHCDVSLEEDIENLINSTVS  102 (305)
Q Consensus        31 ~k~vlVtGas~giG~~ia~~l~~~g~~vv~~---~r~~~~~~~~~---~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~  102 (305)
                      .|+|||||||+|||+++|+.|+++|++|+++   .|+....+.+.   +.+  .+.++..+.||++|.++++++++++.+
T Consensus         2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~   81 (285)
T d1jtva_           2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE   81 (285)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccc
Confidence            4789999999999999999999999986554   34333222222   222  356799999999999999999988743


Q ss_pred             hcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccc
Q 021960          103 RYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAY  182 (305)
Q Consensus       103 ~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y  182 (305)
                        |.+|+||||||....    .++.+.+.++|++.+++|+.+++++++.++|.|++++.|+||++||.++..+.++...|
T Consensus        82 --g~idilvnnag~~~~----~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~~~~~~~~Y  155 (285)
T d1jtva_          82 --GRVDVLVCNAGLGLL----GPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVY  155 (285)
T ss_dssp             --SCCSEEEECCCCCCC----SCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTTCHHH
T ss_pred             --cchhhhhhccccccc----ccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcCCCCCchHH
Confidence              789999999998654    67888999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhh-cCCCC
Q 021960          183 TASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSG-LGNLK  261 (305)
Q Consensus       183 ~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  261 (305)
                      ++||+|+.+|+++|+.|++++||+||+|+||+++|+|..+.+...    +.    .......+..+.+.+.... ...+.
T Consensus       156 ~asKaal~~l~~~la~El~~~gIrVn~V~PG~v~T~~~~~~~~~~----~~----~~~~~~~~~~~~~~~~~~~~~~~~~  227 (285)
T d1jtva_         156 CASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSP----EE----VLDRTDIHTFHRFYQYLAHSKQVFR  227 (285)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCH----HH----HHHTSCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCCChHHHHhccCH----HH----HhhccchhHHHHHHHHHHHHhhhhc
Confidence            999999999999999999999999999999999999976554320    00    0011112222222211110 01233


Q ss_pred             CCCCCHHHHHHHHHHhccC---CCCceeccEE
Q 021960          262 GTTLRSKDIAEAALYLASD---ESRYVSGHNL  290 (305)
Q Consensus       262 ~~~~~~~dva~~v~~l~s~---~~~~~tG~~i  290 (305)
                      ++..+|||||+.++++++.   ..+|++|+.+
T Consensus       228 ~~~~~PeeVA~~v~~~~~~~~p~~ry~~g~~~  259 (285)
T d1jtva_         228 EAAQNPEEVAEVFLTALRAPKPTLRYFTTERF  259 (285)
T ss_dssp             HHCBCHHHHHHHHHHHHHCSSCCSEEESCSTT
T ss_pred             ccCCCHHHHHHHHHHHHhCCCCCeEEecHHHH
Confidence            4677999999999999864   3578998754

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=4.9e-42  Score=303.70  Aligned_cols=248  Identities=20%  Similarity=0.185  Sum_probs=192.2

Q ss_pred             CCCCCCCCEEEEecCCC--chHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc----------C---CCC-eEEEEec--
Q 021960           25 SHRRLEGKVAIITGGAR--GIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL----------A---PAP-VTFVHCD--   86 (305)
Q Consensus        25 ~~~~l~~k~vlVtGas~--giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~----------~---~~~-v~~~~~D--   86 (305)
                      ++.+|+||++|||||+|  |||+++|+.|+++|++|++++|+...........          .   ... -....+|  
T Consensus         2 ~~~~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (297)
T d1d7oa_           2 LPIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAV   81 (297)
T ss_dssp             CCCCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTT
T ss_pred             CCcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhh
Confidence            56789999999999876  9999999999999999999988643221111100          0   000 1222333  


Q ss_pred             ------------------CCCHHHHHHHHHHHHHhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHH
Q 021960           87 ------------------VSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALG  148 (305)
Q Consensus        87 ------------------~~d~~~i~~~~~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l  148 (305)
                                        .++..+++++++++.+++|+||+||||||.....  ..++.+.+.++|++.+++|+.+++.+
T Consensus        82 ~~~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~--~~~~~~~~~~~~~~~~~vn~~~~~~~  159 (297)
T d1d7oa_          82 FDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEV--SKPLLETSRKGYLAAISASSYSFVSL  159 (297)
T ss_dssp             CCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTT--TSCGGGCCHHHHHHHHHHHTHHHHHH
T ss_pred             ccccccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCccccccccccccc--ccchhhhhcccccccccchhhhhhhh
Confidence                              2455667889999999999999999999975432  26788899999999999999999999


Q ss_pred             HHHHHHHHHcCCCCEEEEeccccccc-CCCCCccchhhHHHHHHHHHHHHHHHC-cCCcEEEEEeCCccccccchhcccC
Q 021960          149 IKHAARVMINRGGGCIISTASVAGVM-GGLGPHAYTASKHAIVGLTKNAACELG-RYGIRVNCISPFGVATSMLVNAWRN  226 (305)
Q Consensus       149 ~~~~~~~~~~~~~~~iv~isS~~~~~-~~~~~~~Y~~sKaa~~~~~~~la~e~~-~~~i~v~~v~PG~v~T~~~~~~~~~  226 (305)
                      ++++++.+.++  +.++.+++.+... ..+....|+++|+++.++++.++.|++ ++|||||+|+||+++|++.......
T Consensus       160 ~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~~~~~~~  237 (297)
T d1d7oa_         160 LSHFLPIMNPG--GASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFI  237 (297)
T ss_dssp             HHHHGGGEEEE--EEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSHH
T ss_pred             hhHHHHHhhcC--CcceeeeehhhcccccccccceecccccccccccccchhccccceEEecccccccccchhhhhccCC
Confidence            99999877544  5556666555443 446777899999999999999999996 6799999999999999985432111


Q ss_pred             CCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          227 SGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                                       ++..+...   .  ..|.+|+++|||||+.++||||+.++|+|||+|.+|||++.
T Consensus       238 -----------------~~~~~~~~---~--~~PlgR~~~peevA~~v~fL~S~~a~~itGq~i~vDGG~s~  287 (297)
T d1d7oa_         238 -----------------DTMIEYSY---N--NAPIQKTLTADEVGNAAAFLVSPLASAITGATIYVDNGLNS  287 (297)
T ss_dssp             -----------------HHHHHHHH---H--HSSSCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGG
T ss_pred             -----------------HHHHHHHH---h--CCCCCCCCCHHHHHHHHHHHhCchhcCCcCceEEECcCHhh
Confidence                             11122222   1  26889999999999999999999999999999999999875

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=100.00  E-value=1.5e-41  Score=297.32  Aligned_cols=248  Identities=20%  Similarity=0.233  Sum_probs=194.5

Q ss_pred             CCCCCEEEEecCCC--chHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc-CCCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           28 RLEGKVAIITGGAR--GIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL-APAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        28 ~l~~k~vlVtGas~--giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~-~~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      .|+||++|||||+|  |||+++|+.|+++|++|++++|+++..+.+.+.. ......++.+|+++.++++++++++.+.+
T Consensus         2 ~L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   81 (274)
T d2pd4a1           2 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDL   81 (274)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHHc
Confidence            47899999999875  9999999999999999999999875444333222 23446778999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchh
Q 021960          105 GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTA  184 (305)
Q Consensus       105 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~  184 (305)
                      |++|++|||+|..........+.+..++.+...+.++..+.....+...+..  +..+.|+++||.+...+.+....|++
T Consensus        82 g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~s~~~~~~~~~~~~~y~a  159 (274)
T d2pd4a1          82 GSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLL--NNGASVLTLSYLGSTKYMAHYNVMGL  159 (274)
T ss_dssp             SCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE--EEEEEEEEEECGGGTSBCTTCHHHHH
T ss_pred             CCCCeEEeecccccccccccccccccchhhhhhhcccccccccccccccccc--ccCcceeeecccccccccccchhhhH
Confidence            9999999999987654333445555666666666666666555554444322  23345667777777777888899999


Q ss_pred             hHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCC
Q 021960          185 SKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT  264 (305)
Q Consensus       185 sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (305)
                      +|+|+.+++|+++.|++++|||||+|+||+++|+|.....+.                  +.......   . ..+.+++
T Consensus       160 sK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~~~------------------~~~~~~~~---~-~~p~~r~  217 (274)
T d2pd4a1         160 AKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADF------------------RMILKWNE---I-NAPLRKN  217 (274)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTH------------------HHHHHHHH---H-HSTTSSC
T ss_pred             HHHHHHHHHHhhHHHhcCcCceecccccCcccCccccccCch------------------HHHHHHHh---h-hhhccCC
Confidence            999999999999999999999999999999999985443211                  11111111   1 3678999


Q ss_pred             CCHHHHHHHHHHhccCCCCceeccEEEecCCcccc
Q 021960          265 LRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTS  299 (305)
Q Consensus       265 ~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~  299 (305)
                      ++|+|||+.+.||+|+.++|+|||+|.+|||+++.
T Consensus       218 ~~pedIA~~v~fL~S~~s~~itG~~i~vDGG~~~~  252 (274)
T d2pd4a1         218 VSLEEVGNAGMYLLSSLSSGVSGEVHFVDAGYHVM  252 (274)
T ss_dssp             CCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGB
T ss_pred             cCHHHHHHHHHHHhChhhCCCcCceEEECCChhhc
Confidence            99999999999999999999999999999999864

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=100.00  E-value=8.2e-41  Score=291.52  Aligned_cols=255  Identities=19%  Similarity=0.209  Sum_probs=202.7

Q ss_pred             CCCCCEEEEecC--CCchHHHHHHHHHHcCCeEEEEecCcchhhh-HhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           28 RLEGKVAIITGG--ARGIGEAAVRLFARHGAKVVIADVEDTLGSV-LASTLAPAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        28 ~l~~k~vlVtGa--s~giG~~ia~~l~~~g~~vv~~~r~~~~~~~-~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      .|+||++|||||  ++|||+++|+.|+++|++|++++|++.+..+ +.+. .+.+...+.||+++.++++++++.+.+.+
T Consensus         3 ~l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~~-~~~~~~~~~~dv~~~~~~~~~~~~v~~~~   81 (268)
T d2h7ma1           3 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDR-LPAKAPLLELDVQNEEHLASLAGRVTEAI   81 (268)
T ss_dssp             TTTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTT-SSSCCCEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHH-cCCceeeEeeecccccccccccchhhhcc
Confidence            578999999994  5799999999999999999999998766533 3333 35567789999999999999999987764


Q ss_pred             ---CCccEEEEcCCCCCCCC-CCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCc
Q 021960          105 ---GRLDILYNNAGVLGNQR-KHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPH  180 (305)
Q Consensus       105 ---g~id~li~nag~~~~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~  180 (305)
                         +++|++|||+|...... ...++.+.+++.+.+.+++|+...+...+...+.+   ..+.+++++|.....+.|+..
T Consensus        82 ~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~i~~~s~~~~~~~p~~~  158 (268)
T d2h7ma1          82 GAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIM---NPGGSIVGMDFDPSRAMPAYN  158 (268)
T ss_dssp             CTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE---EEEEEEEEEECCCSSCCTTTH
T ss_pred             ccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhc---ccccccccccccccccCcccc
Confidence               67999999999754322 22456788999999999999999988877776543   234566667777778889999


Q ss_pred             cchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCC
Q 021960          181 AYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNL  260 (305)
Q Consensus       181 ~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (305)
                      .|+++|+|+.+|+|++++|++++|||||+|+||+++|++....+........           ....+...+.... ..|
T Consensus       159 ~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~-~~p  226 (268)
T d2h7ma1         159 WMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEA-----------GAQIQLLEEGWDQ-RAP  226 (268)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHH-----------HHHHHHHHHHHHH-HCT
T ss_pred             hhhccccchhhccccchhhhhccCCcceEEecCCCCChhhhhhccchhhhhh-----------ccchHHHHHHHHh-cCC
Confidence            9999999999999999999999999999999999999997766544222111           1222223332222 255


Q ss_pred             CCC-CCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          261 KGT-TLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       261 ~~~-~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      .++ +.+|+|+|+.+.||+|+.++|+|||+|.+|||++.
T Consensus       227 l~rr~~~p~dva~~v~fL~Sd~a~~iTG~~i~vDGG~~~  265 (268)
T d2h7ma1         227 IGWNMKDATPVAKTVCALLSDWLPATTGDIIYADGGAHT  265 (268)
T ss_dssp             TCCCTTCCHHHHHHHHHHHSSSCTTCCSEEEEESTTGGG
T ss_pred             CCCCCCCHHHHHHHHHHHhCchhcCccCCEEEECcCccc
Confidence            555 89999999999999999999999999999999964

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=3.4e-41  Score=288.82  Aligned_cols=224  Identities=17%  Similarity=0.173  Sum_probs=188.6

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcC--Cc
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYG--RL  107 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g--~i  107 (305)
                      +||++|||||++|||+++|+.|+++|++|+++++++....        .....+.+|.++.++++.+.+.+.+.++  ++
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i   72 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA--------SASVIVKMTDSFTEQADQVTAEVGKLLGDQKV   72 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS--------SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc--------cccceeecccCcHHHHHHHHHHHHHHhCCCCc
Confidence            5899999999999999999999999999999988764321        1244567788888888888888776643  69


Q ss_pred             cEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhHH
Q 021960          108 DILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKH  187 (305)
Q Consensus       108 d~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKa  187 (305)
                      |+||||||.....   ..+.+.+.++|++.+++|+.+++++++.++|+|.+  +|+||++||.++..+.++...|++||+
T Consensus        73 D~lInnAG~~~~~---~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~--~G~Iv~isS~~~~~~~~~~~~Y~asKa  147 (236)
T d1dhra_          73 DAILCVAGGWAGG---NAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE--GGLLTLAGAKAALDGTPGMIGYGMAKG  147 (236)
T ss_dssp             EEEEECCCCCCCB---CTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCCTTBHHHHHHHH
T ss_pred             eEEEECCcccccc---cchhcCCHHHHHHHHHHcchHHHHHHHHHHHhccc--ccceeEEccHHHcCCccCCcccHHHHH
Confidence            9999999975442   34556678999999999999999999999999944  589999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHC--cCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCC
Q 021960          188 AIVGLTKNAACELG--RYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL  265 (305)
Q Consensus       188 a~~~~~~~la~e~~--~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (305)
                      |+++|+|+|+.|++  ++||+||+|+||+++|+|.++..+.                                ...+++.
T Consensus       148 al~~lt~~la~El~~~~~gI~vn~v~PG~v~T~~~~~~~~~--------------------------------~~~~~~~  195 (236)
T d1dhra_         148 AVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMPE--------------------------------ADFSSWT  195 (236)
T ss_dssp             HHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHSTT--------------------------------SCGGGSE
T ss_pred             HHHHHHHHHHHHhccCCCcEEEEEEEeccCcCCcchhhCcc--------------------------------chhhcCC
Confidence            99999999999998  5799999999999999996554322                                1234566


Q ss_pred             CHHHHHHHHHHhccCCCCceeccEEEe--cCCccc
Q 021960          266 RSKDIAEAALYLASDESRYVSGHNLVV--DGGVTT  298 (305)
Q Consensus       266 ~~~dva~~v~~l~s~~~~~~tG~~i~i--dgG~~~  298 (305)
                      +||++|+.+.||+++..++++|+.|.+  ++|.+.
T Consensus       196 ~pe~va~~~~~l~s~~~~~i~G~~i~v~~~~g~t~  230 (236)
T d1dhra_         196 PLEFLVETFHDWITGNKRPNSGSLIQVVTTDGKTE  230 (236)
T ss_dssp             EHHHHHHHHHHHHTTTTCCCTTCEEEEEEETTEEE
T ss_pred             CHHHHHHHHHHHhCCCccCCCCCeEEEEEECCEEE
Confidence            899999999999999999999997765  555543

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=100.00  E-value=2.6e-40  Score=285.37  Aligned_cols=187  Identities=21%  Similarity=0.252  Sum_probs=164.3

Q ss_pred             CEEEEecCCCchHHHHHHHHH---HcCCeEEEEecCcchhhhHhhhc-CCCCeEEEEecCCCHHHHHHHHHHHHH--hcC
Q 021960           32 KVAIITGGARGIGEAAVRLFA---RHGAKVVIADVEDTLGSVLASTL-APAPVTFVHCDVSLEEDIENLINSTVS--RYG  105 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~---~~g~~vv~~~r~~~~~~~~~~~~-~~~~v~~~~~D~~d~~~i~~~~~~~~~--~~g  105 (305)
                      |+|||||||+|||+++|+.|+   ++|++|++++|+++..+.+.+.. ...++.++.||++|.++++++++++.+  .++
T Consensus         3 KtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~   82 (248)
T d1snya_           3 NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKDQ   82 (248)
T ss_dssp             SEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGGG
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhcC
Confidence            799999999999999999996   57999999999988776654432 345799999999999999999998854  678


Q ss_pred             CccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC-----------CCCEEEEeccccccc
Q 021960          106 RLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINR-----------GGGCIISTASVAGVM  174 (305)
Q Consensus       106 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----------~~~~iv~isS~~~~~  174 (305)
                      ++|+||||||.....   ..+.+.+.++|++.+++|+.+++++++.++|+|+++           +.+++|+++|..+..
T Consensus        83 ~iDiLvnNAg~~~~~---~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~~  159 (248)
T d1snya_          83 GLNVLFNNAGIAPKS---ARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSI  159 (248)
T ss_dssp             CCSEEEECCCCCCCC---CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCS
T ss_pred             CcceEEeeccccccC---cccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhcccccccccccccccccccccccc
Confidence            999999999986543   457788999999999999999999999999999753           468999999998775


Q ss_pred             C---CCCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccch
Q 021960          175 G---GLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLV  221 (305)
Q Consensus       175 ~---~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~  221 (305)
                      +   .+++.+|++||+|+.+|+++++.|++++||+||+|+||+++|+|..
T Consensus       160 ~~~~~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~m~~  209 (248)
T d1snya_         160 QGNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGG  209 (248)
T ss_dssp             TTCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTC
T ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCCccc
Confidence            3   4567799999999999999999999999999999999999999854

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=100.00  E-value=9.9e-40  Score=284.15  Aligned_cols=242  Identities=26%  Similarity=0.319  Sum_probs=189.2

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchh-hhHhhhc---CCCCeEEEEecCC----CHHHHHHHHHHHHHhc
Q 021960           33 VAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLG-SVLASTL---APAPVTFVHCDVS----LEEDIENLINSTVSRY  104 (305)
Q Consensus        33 ~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~-~~~~~~~---~~~~v~~~~~D~~----d~~~i~~~~~~~~~~~  104 (305)
                      ++|||||++|||+++|+.|+++|++|++++|+.+.. +.+.+++   .+.++..+.+|..    +.+.++++++++.+++
T Consensus         3 vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (266)
T d1mxha_           3 AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRAF   82 (266)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHHH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHHh
Confidence            789999999999999999999999999999885542 3332222   3455666666654    3677888889999999


Q ss_pred             CCccEEEEcCCCCCCCCCC-------CcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHc-----CCCCEEEEeccccc
Q 021960          105 GRLDILYNNAGVLGNQRKH-------KSIIDFDADEFDNVMRVNVKGMALGIKHAARVMIN-----RGGGCIISTASVAG  172 (305)
Q Consensus       105 g~id~li~nag~~~~~~~~-------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-----~~~~~iv~isS~~~  172 (305)
                      |+||++|||||........       ....+...+.+...+..|+.+.+...+...+.+..     ...+.+++++|..+
T Consensus        83 g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (266)
T d1mxha_          83 GRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMT  162 (266)
T ss_dssp             SCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCGGG
T ss_pred             CCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhhccc
Confidence            9999999999986542110       11122344567888899999988888877666643     24568888999999


Q ss_pred             ccCCCCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHH
Q 021960          173 VMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEE  252 (305)
Q Consensus       173 ~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (305)
                      ..+.++...|++||+++++|+|++|.|++++|||||+|+||+++|++...                     ++..+.+. 
T Consensus       163 ~~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~~---------------------~~~~~~~~-  220 (266)
T d1mxha_         163 DLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMP---------------------QETQEEYR-  220 (266)
T ss_dssp             GSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSSC---------------------HHHHHHHH-
T ss_pred             cccCcchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccCC---------------------HHHHHHHH-
Confidence            99999999999999999999999999999999999999999999986321                     12222222 


Q ss_pred             HHhhcCCCCCCC-CCHHHHHHHHHHhccCCCCceeccEEEecCCccccc
Q 021960          253 FVSGLGNLKGTT-LRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTSR  300 (305)
Q Consensus       253 ~~~~~~~~~~~~-~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~~~  300 (305)
                        .  ..|.++. .+|||+|++++||+|++++|+|||+|.+|||+++.+
T Consensus       221 --~--~~pl~r~~~~peeva~~v~fL~s~~s~~itG~~i~vDGG~~l~~  265 (266)
T d1mxha_         221 --R--KVPLGQSEASAAQIADAIAFLVSKDAGYITGTTLKVDGGLILAR  265 (266)
T ss_dssp             --T--TCTTTSCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCC
T ss_pred             --h--cCCCCCCCCCHHHHHHHHHHHhCchhCCccCCeEEECccHhhhC
Confidence              2  2566554 799999999999999999999999999999999875

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5e-40  Score=287.85  Aligned_cols=218  Identities=25%  Similarity=0.267  Sum_probs=184.0

Q ss_pred             CEEEEecCCCchHHHHHHHHHHc-CCeEEEEecCcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 021960           32 KVAIITGGARGIGEAAVRLFARH-GAKVVIADVEDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVSRYGRLD  108 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~-g~~vv~~~r~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id  108 (305)
                      +++|||||++|||+++|+.|+++ |++|++++|+.++.+...+.+  .+.++.++.||++|.++++++++++.+++|+||
T Consensus         4 rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~iD   83 (275)
T d1wmaa1           4 HVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGGLD   83 (275)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSSEE
T ss_pred             eEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcCCcE
Confidence            46699999999999999999986 899999999988876665554  355789999999999999999999999999999


Q ss_pred             EEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCC-----------
Q 021960          109 ILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGL-----------  177 (305)
Q Consensus       109 ~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~-----------  177 (305)
                      +||||||....    ..+.+.+.++|++.+++|+.+++++++.++|.|++  .|+||++||..+..+.+           
T Consensus        84 iLVnNAGi~~~----~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~--~g~ivnisS~~~~~~~~~~~~y~~~k~~  157 (275)
T d1wmaa1          84 VLVNNAGIAFK----VADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKP--QGRVVNVSSIMSVRALKSCSPELQQKFR  157 (275)
T ss_dssp             EEEECCCCCCC----TTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCHHHHHHHHTSCHHHHHHHH
T ss_pred             EEEEcCCcCCC----CCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cCCcccccccceeccccccchhhhhhhc
Confidence            99999998754    45666788899999999999999999999999954  58999999987653321           


Q ss_pred             ------------------------------CCccchhhHHHHHHHHHHHHHHHCc----CCcEEEEEeCCccccccchhc
Q 021960          178 ------------------------------GPHAYTASKHAIVGLTKNAACELGR----YGIRVNCISPFGVATSMLVNA  223 (305)
Q Consensus       178 ------------------------------~~~~Y~~sKaa~~~~~~~la~e~~~----~~i~v~~v~PG~v~T~~~~~~  223 (305)
                                                    ....|++||+++.+|++.+++|+++    .||+||+|+||+|+|+|....
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T~m~~~~  237 (275)
T d1wmaa1         158 SETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPK  237 (275)
T ss_dssp             CSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCTT
T ss_pred             ccccchhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccCCcccCc
Confidence                                          2346999999999999999999865    599999999999999984321


Q ss_pred             ccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHHhc--cCCCCceeccEEEecCC
Q 021960          224 WRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSKDIAEAALYLA--SDESRYVSGHNLVVDGG  295 (305)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~--s~~~~~~tG~~i~idgG  295 (305)
                                                             ...+|||+|+.++|++  +++....+|+.+. |.+
T Consensus       238 ---------------------------------------~~~~pee~A~~~~~~a~~~~~~~~~~G~~~~-~~~  271 (275)
T d1wmaa1         238 ---------------------------------------ATKSPEEGAETPVYLALLPPDAEGPHGQFVS-EKR  271 (275)
T ss_dssp             ---------------------------------------CSBCHHHHTHHHHHHHSCCTTCCCCCSCEEE-TTE
T ss_pred             ---------------------------------------ccCCHHHHHHHHHHHHcCChhhcCCCeEEEE-CCE
Confidence                                                   2237999999999986  4566678998886 554

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=3.9e-39  Score=278.36  Aligned_cols=224  Identities=18%  Similarity=0.217  Sum_probs=181.5

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHcCC--eEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCC
Q 021960           29 LEGKVAIITGGARGIGEAAVRLFARHGA--KVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGR  106 (305)
Q Consensus        29 l~~k~vlVtGas~giG~~ia~~l~~~g~--~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~  106 (305)
                      |+.|+||||||++|||+++|++|+++|+  .|++.+|+.+..+.+.+. .+.++.++.+|++|.++++++++++.+.++.
T Consensus         1 M~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~-~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~   79 (250)
T d1yo6a1           1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSI-KDSRVHVLPLTVTCDKSLDTFVSKVGEIVGS   79 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTC-CCTTEEEEECCTTCHHHHHHHHHHHHHHHGG
T ss_pred             CcCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHh-hCCceEEEEEecCCHHHHHHHHHHHHHHhCC
Confidence            4679999999999999999999999996  588889988877766544 3567999999999999999999999988764


Q ss_pred             --ccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC-----------CCCEEEEecccccc
Q 021960          107 --LDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINR-----------GGGCIISTASVAGV  173 (305)
Q Consensus       107 --id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----------~~~~iv~isS~~~~  173 (305)
                        ||+||||||.....   .++.+.+.++|++.+++|+.+++++++.++|+|+++           ..+++++++|....
T Consensus        80 ~~idilinnAG~~~~~---~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~  156 (250)
T d1yo6a1          80 DGLSLLINNAGVLLSY---GTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGS  156 (250)
T ss_dssp             GCCCEEEECCCCCCCB---CTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGC
T ss_pred             CCeEEEEEcCcccCCC---CccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceecccccccccccc
Confidence              99999999986543   466788999999999999999999999999999754           23788888887665


Q ss_pred             cCC-------CCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHH
Q 021960          174 MGG-------LGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKE  246 (305)
Q Consensus       174 ~~~-------~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (305)
                      .+.       .+..+|++||+|+.+|+++|+.|++++||+||+|+||+|+|+|..+                        
T Consensus       157 ~~~~~~~~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~m~~~------------------------  212 (250)
T d1yo6a1         157 ITDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK------------------------  212 (250)
T ss_dssp             STTCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC-------------------------------
T ss_pred             ccCCcccccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCCCCCC------------------------
Confidence            432       2345799999999999999999999999999999999999998421                        


Q ss_pred             HHHHHHHHhhcCCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCC
Q 021960          247 VRKMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGG  295 (305)
Q Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG  295 (305)
                                     ....+||+.++.++..+.+.....+|.++..||-
T Consensus       213 ---------------~~~~~~e~~a~~~~~~~~~~~~~~sG~f~~~~g~  246 (250)
T d1yo6a1         213 ---------------NAALTVEQSTAELISSFNKLDNSHNGRFFMRNLK  246 (250)
T ss_dssp             ---------------------HHHHHHHHHHHTTCCGGGTTCEEETTEE
T ss_pred             ---------------CCCCCHHHHHHHHHHHHhcCCCCCCeEEECCCCe
Confidence                           1224688999988888887666789999988763

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=6.7e-39  Score=274.36  Aligned_cols=217  Identities=21%  Similarity=0.193  Sum_probs=179.8

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHH--hcCCcc
Q 021960           31 GKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVS--RYGRLD  108 (305)
Q Consensus        31 ~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~--~~g~id  108 (305)
                      .++||||||++|||+++|++|+++|++|++++|++....        .....+.+|..+.++.....+.+..  ++++||
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iD   73 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA--------DSNILVDGNKNWTEQEQSILEQTASSLQGSQVD   73 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS--------SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhcc--------cccceeccccCchhHHHHHHHHHHHHhcCCCee
Confidence            356799999999999999999999999999999865321        1234566788888877777776665  358899


Q ss_pred             EEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhHHH
Q 021960          109 ILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHA  188 (305)
Q Consensus       109 ~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKaa  188 (305)
                      +||||||.....   ..+.+.+.+.|+.++++|+.+++++.+.++|+|++  +|+||++||..+..+.+++..|+++|+|
T Consensus        74 ~linnAG~~~~~---~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~--~g~Iv~isS~~~~~~~~~~~~Y~asKaa  148 (235)
T d1ooea_          74 GVFCVAGGWAGG---SASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP--GGLLQLTGAAAAMGPTPSMIGYGMAKAA  148 (235)
T ss_dssp             EEEECCCCCCCB---CTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCCTTBHHHHHHHHH
T ss_pred             EEEECCcccccc---cccccCcHHHHhhHhhhHHHHHHHHhhhccccccc--ceEEEEeccHHhcCCcccccchHHHHHH
Confidence            999999976442   33445566889999999999999999999999944  5899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHC--cCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCCC
Q 021960          189 IVGLTKNAACELG--RYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLR  266 (305)
Q Consensus       189 ~~~~~~~la~e~~--~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (305)
                      +++|+++|+.|++  ..+|+||+|+||+++|+|.++.++.                                ....++.+
T Consensus       149 l~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~~~~~~~~~--------------------------------~~~~~~~~  196 (235)
T d1ooea_         149 VHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWMPN--------------------------------ADHSSWTP  196 (235)
T ss_dssp             HHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHSTT--------------------------------CCGGGCBC
T ss_pred             HHHHHHHHHHHhccCCCceEEEEEecCcCcCcchhhhCcC--------------------------------CccccCCC
Confidence            9999999999998  4789999999999999987655432                                12345668


Q ss_pred             HHHHHHHHH-HhccCCCCceeccEEEe
Q 021960          267 SKDIAEAAL-YLASDESRYVSGHNLVV  292 (305)
Q Consensus       267 ~~dva~~v~-~l~s~~~~~~tG~~i~i  292 (305)
                      |+++++.++ |+.++..+++||+.+.+
T Consensus       197 ~~~va~~~~~~l~~~~~~~~tG~~i~v  223 (235)
T d1ooea_         197 LSFISEHLLKWTTETSSRPSSGALLKI  223 (235)
T ss_dssp             HHHHHHHHHHHHHCGGGCCCTTCEEEE
T ss_pred             HHHHHHHHHHHhcCccccCCCceEEEE
Confidence            999999987 56667788999999998

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.1e-38  Score=274.72  Aligned_cols=190  Identities=22%  Similarity=0.238  Sum_probs=173.2

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc---CCCCeEEEEecCCCHHHHHHHHHHHHHhcC
Q 021960           29 LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL---APAPVTFVHCDVSLEEDIENLINSTVSRYG  105 (305)
Q Consensus        29 l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~---~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g  105 (305)
                      |+||++||||||+|||+++|+.|+++|++|++++|+++..+.+.+..   .+..+..+.+|+++.+.+..+.+.+.+.++
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g   91 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMG   91 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHhC
Confidence            79999999999999999999999999999999999988777665443   456788999999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhh
Q 021960          106 RLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTAS  185 (305)
Q Consensus       106 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  185 (305)
                      .+|++|+|||....    ..+.+.+.++|++.+++|+.+++++++.++|.|++ ++|+||++||.++..+.++...|++|
T Consensus        92 ~~~~li~nag~~~~----~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~-~~G~ii~isS~~~~~~~p~~~~Y~as  166 (269)
T d1xu9a_          92 GLDMLILNHITNTS----LNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQ-SNGSIVVVSSLAGKVAYPMVAAYSAS  166 (269)
T ss_dssp             SCSEEEECCCCCCC----CCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-HTCEEEEEEEGGGTSCCTTCHHHHHH
T ss_pred             Cccccccccccccc----cccccCCHHHhhhheeeehhhHHHHHHHHHHHHHh-cCCcceEeccchhcCCCCCchHHHHH
Confidence            99999999998654    56778899999999999999999999999999964 46999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCc--CCcEEEEEeCCccccccchhc
Q 021960          186 KHAIVGLTKNAACELGR--YGIRVNCISPFGVATSMLVNA  223 (305)
Q Consensus       186 Kaa~~~~~~~la~e~~~--~~i~v~~v~PG~v~T~~~~~~  223 (305)
                      |+|+++|+++|+.|++.  .||+||+|+||+|+|+|..+.
T Consensus       167 Kaal~~~~~~La~El~~~~~~I~V~~v~PG~v~T~~~~~~  206 (269)
T d1xu9a_         167 KFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKA  206 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCcHHHHh
Confidence            99999999999999974  579999999999999986654

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=100.00  E-value=1.8e-37  Score=268.54  Aligned_cols=220  Identities=25%  Similarity=0.358  Sum_probs=165.5

Q ss_pred             CEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHh-cCCccEE
Q 021960           32 KVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSR-YGRLDIL  110 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~-~g~id~l  110 (305)
                      |+||||||++|||+++|+.|+++|++|++++|++..               ..+|+.+.+..+.....+..+ .+.+|++
T Consensus         2 kVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~---------------~~~d~~~~~~~~~~~~~~~~~~~~~id~l   66 (257)
T d1fjha_           2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE---------------VIADLSTAEGRKQAIADVLAKCSKGMDGL   66 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS---------------EECCTTSHHHHHHHHHHHHTTCTTCCSEE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHH---------------HHHHhcCHHHHHHHHHHHHHHhCCCCcEE
Confidence            799999999999999999999999999999987542               346899998888876665544 4579999


Q ss_pred             EEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccc-----------------
Q 021960          111 YNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGV-----------------  173 (305)
Q Consensus       111 i~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~-----------------  173 (305)
                      |+|||....           .+.+.+...+|..+...+.+...+.+.+.....+.++++....                 
T Consensus        67 v~~Ag~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  135 (257)
T d1fjha_          67 VLCAGLGPQ-----------TKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGE  135 (257)
T ss_dssp             EECCCCCTT-----------CSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTC
T ss_pred             EEcCCCCCc-----------HHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccchhhhhhhhhhhccCCc
Confidence            999997432           1346777889999999999999888877666666666554322                 


Q ss_pred             ----------cC-CCCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCC
Q 021960          174 ----------MG-GLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIP  242 (305)
Q Consensus       174 ----------~~-~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~  242 (305)
                                .+ .++..+|+++|+|+++|+|++|.|++++|||||+|+||+++|++....+...               
T Consensus       136 ~~~i~s~~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~---------------  200 (257)
T d1fjha_         136 EAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDP---------------  200 (257)
T ss_dssp             HHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC----------------------------
T ss_pred             EEEEeeehhccCCCcchHHHHHHhhhhhccccccccccccccccccccccCCcCChhHHhhcCCH---------------
Confidence                      11 1234579999999999999999999999999999999999999976544321               


Q ss_pred             cHHHHHHHHHHHhhcCCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          243 SQKEVRKMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                        +..+   ... ....|.+|+.+|||||+.+.||+|++++|+|||+|.+|||++.
T Consensus       201 --~~~~---~~~-~~~~PlgR~g~p~eva~~v~fL~S~~s~~itG~~i~vDGG~ta  250 (257)
T d1fjha_         201 --RYGE---SIA-KFVPPMGRRAEPSEMASVIAFLMSPAASYVHGAQIVIDGGIDA  250 (257)
T ss_dssp             --------------CCCSTTSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESTTHHH
T ss_pred             --HHHH---HHH-hcCCCCCCCcCHHHHHHHHHHHhCchhCCccCceEEeCCCccc
Confidence              0001   111 1125889999999999999999999999999999999999875

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.97  E-value=6.2e-30  Score=221.29  Aligned_cols=177  Identities=20%  Similarity=0.274  Sum_probs=146.7

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCe-EEEEecCcchhh---hHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHHh
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAK-VVIADVEDTLGS---VLASTL--APAPVTFVHCDVSLEEDIENLINSTVSR  103 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~-vv~~~r~~~~~~---~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~~  103 (305)
                      .++++|||||++|||+++|++|+++|++ |++++|+....+   .+.+.+  .+.++.++.||++|.++++++++++.+.
T Consensus         8 p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~~   87 (259)
T d2fr1a1           8 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDD   87 (259)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTT
T ss_pred             CcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhcccccc
Confidence            4679999999999999999999999994 888888643322   222221  4567999999999999999999987655


Q ss_pred             cCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccch
Q 021960          104 YGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYT  183 (305)
Q Consensus       104 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~  183 (305)
                       +++|.||||+|....    .++.+.+.+++++.+++|+.+++++.+.    +...+.++||++||+++..+.++++.|+
T Consensus        88 -~~i~~vv~~ag~~~~----~~~~~~~~~~~~~~~~~~~~g~~~l~~~----~~~~~~~~iv~~SS~a~~~g~~~~~~Ya  158 (259)
T d2fr1a1          88 -VPLSAVFHAAATLDD----GTVDTLTGERIERASRAKVLGARNLHEL----TRELDLTAFVLFSSFASAFGAPGLGGYA  158 (259)
T ss_dssp             -SCEEEEEECCCCCCC----CCGGGCCHHHHHHHTHHHHHHHHHHHHH----HTTSCCSEEEEEEEHHHHTCCTTCTTTH
T ss_pred             -ccccccccccccccc----cccccccHHHHHHHhhhhccchhHHHHH----hhccCCceEeeecchhhccCCcccHHHH
Confidence             579999999998755    6788999999999999999998877664    4446778999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHCcCCcEEEEEeCCcccccc
Q 021960          184 ASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSM  219 (305)
Q Consensus       184 ~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~  219 (305)
                      ++|++++.|++.++.    .|+++++|+||.+.++.
T Consensus       159 Aaka~l~~la~~~~~----~Gi~v~~I~pg~~~~~g  190 (259)
T d2fr1a1         159 PGNAYLDGLAQQRRS----DGLPATAVAWGTWAGSG  190 (259)
T ss_dssp             HHHHHHHHHHHHHHH----TTCCCEEEEECCBC---
T ss_pred             HHHHhHHHHHHHHHh----CCCCEEECCCCcccCCc
Confidence            999999988776654    58999999999986553

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=99.83  E-value=1.4e-19  Score=162.52  Aligned_cols=229  Identities=14%  Similarity=0.081  Sum_probs=156.1

Q ss_pred             CEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcch-----hhhHhh--hcCCCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           32 KVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTL-----GSVLAS--TLAPAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~-----~~~~~~--~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      |+||||||||.||.+++++|+++|+.|+.++|....     ...+..  .....++.++.+|++|.++++++++..    
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~----   77 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV----   77 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH----
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhcc----
Confidence            789999999999999999999999999999885321     111111  113457999999999999999998866    


Q ss_pred             CCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEeccccccc----------
Q 021960          105 GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVM----------  174 (305)
Q Consensus       105 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~----------  174 (305)
                       .+|+++|+|+.....        .+.++.++.+++|+.++.++++++...- .++..+||++||.+.+-          
T Consensus        78 -~~d~v~h~aa~~~~~--------~~~~~~~~~~~~Nv~gt~nllea~~~~~-~~~~~r~i~~SS~~vYG~~~~~~~~E~  147 (357)
T d1db3a_          78 -QPDEVYNLGAMSHVA--------VSFESPEYTADVDAMGTLRLLEAIRFLG-LEKKTRFYQASTSELYGLVQEIPQKET  147 (357)
T ss_dssp             -CCSEEEECCCCCTTT--------TTTSCHHHHHHHHTHHHHHHHHHHHHTT-CTTTCEEEEEEEGGGGTTCCSSSBCTT
T ss_pred             -CCCEEEEeecccccc--------hhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCCCcEEEEEEchhhhCCCCCCCcCCC
Confidence             699999999975432        1234566778999999999988875432 23345899999865431          


Q ss_pred             -CCCCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHH
Q 021960          175 -GGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEF  253 (305)
Q Consensus       175 -~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (305)
                       +..+...|+.+|.+.+.+++.+++.+   ++.+..+.|+.+..|......                 ........+...
T Consensus       148 ~~~~P~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~vyGp~~~~~~-----------------~~~~i~~~~~~~  207 (357)
T d1db3a_         148 TPFYPRSPYAVAKLYAYWITVNYRESY---GMYACNGILFNHESPRRGETF-----------------VTRKITRAIANI  207 (357)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTSCTTS-----------------HHHHHHHHHHHH
T ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHHh---CCCEEEEEeccccCCCCCcCC-----------------CchHHHHHHHHH
Confidence             11235689999999999999988774   688899999988777421100                 000111112211


Q ss_pred             Hhhc--------CCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          254 VSGL--------GNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       254 ~~~~--------~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      ....        +.....+..++|++++++.++...    .|+.+++..|...
T Consensus       208 ~~~~~~~~~~g~~~~~r~~~~v~D~~~a~~~~~~~~----~~~~yni~sg~~~  256 (357)
T d1db3a_         208 AQGLESCLYLGNMDSLRDWGHAKDYVKMQWMMLQQE----QPEDFVIATGVQY  256 (357)
T ss_dssp             HTTSCCCEEESCTTCEECCEEHHHHHHHHHHTTSSS----SCCCEEECCCCCE
T ss_pred             HhCCCceEEECCCCeeecceeechHHHHHHHHHhCC----CCCeEEECCCCce
Confidence            1111        112234678999999998887654    4677888776543

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=99.77  E-value=1.7e-17  Score=147.67  Aligned_cols=168  Identities=17%  Similarity=0.133  Sum_probs=127.4

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhh---hHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 021960           33 VAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGS---VLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDI  109 (305)
Q Consensus        33 ~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~---~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~  109 (305)
                      .||||||+|.||+++++.|+++|++|++++|......   ...+.....++.++.+|++|.+.+.++++..     ++|+
T Consensus         2 KiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~-----~~d~   76 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDH-----AIDT   76 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHT-----TCSE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhcc-----CCCE
Confidence            5999999999999999999999999999876322211   1112223456999999999999998887754     6999


Q ss_pred             EEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCC------------C
Q 021960          110 LYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGG------------L  177 (305)
Q Consensus       110 li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~------------~  177 (305)
                      |||+|+....        ..+.++.++.+++|+.++.++++.+...    +..++|++||.+.+.+.            .
T Consensus        77 ViHlAa~~~~--------~~~~~~~~~~~~~Nv~gt~nlL~~~~~~----~v~~~i~~Ss~~vy~~~~~~~~~e~~~~~~  144 (338)
T d1udca_          77 VIHFAGLKAV--------GESVQKPLEYYDNNVNGTLRLISAMRAA----NVKNFIFSSSATVYGDQPKIPYVESFPTGT  144 (338)
T ss_dssp             EEECCSCCCH--------HHHHHCHHHHHHHHHHHHHHHHHHHHHH----TCCEEEEEEEGGGGCSCCSSSBCTTSCCCC
T ss_pred             EEECCCccch--------hhHHhCHHHHHHhHHHHHHHHHHHHHHh----CCCEEEecCcceEEccccccccccccccCC
Confidence            9999986421        1233456688999999998888877653    44679999887765321            2


Q ss_pred             CCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCcccccc
Q 021960          178 GPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSM  219 (305)
Q Consensus       178 ~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~  219 (305)
                      ....|+.+|.+.+.+++..+.+.  .++.+..++|+.+..+.
T Consensus       145 p~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~  184 (338)
T d1udca_         145 PQSPYGKSKLMVEQILTDLQKAQ--PDWSIALLRYFNPVGAH  184 (338)
T ss_dssp             CSSHHHHHHHHHHHHHHHHHHHS--TTCEEEEEEECEEECCC
T ss_pred             CcchHHHHHhhhhHHHHHHHhhc--cCCeEEEEeeccEEecc
Confidence            35689999999999998877763  57888889998887764

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.76  E-value=1.1e-17  Score=150.30  Aligned_cols=230  Identities=16%  Similarity=0.080  Sum_probs=157.6

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEE-EecCcch--hhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 021960           33 VAIITGGARGIGEAAVRLFARHGAKVVI-ADVEDTL--GSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDI  109 (305)
Q Consensus        33 ~vlVtGas~giG~~ia~~l~~~g~~vv~-~~r~~~~--~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~  109 (305)
                      .||||||+|.||++++++|+++|+.|++ +++....  ...+.......++.++.+|++|.++++++++..     ++|+
T Consensus         2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~-----~~d~   76 (361)
T d1kewa_           2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQY-----QPDA   76 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHH-----CCSE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHHHhhhhcCCcEEEEccCCCHHHHHHHHHhC-----CCCE
Confidence            5899999999999999999999997554 4432211  122223334567999999999999999887754     6999


Q ss_pred             EEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC-----CCCEEEEecccccccC---------
Q 021960          110 LYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINR-----GGGCIISTASVAGVMG---------  175 (305)
Q Consensus       110 li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~~~iv~isS~~~~~~---------  175 (305)
                      |||+|+....        ..+.++..+.+++|+.++.++++.+.......     +..++|++||...+-.         
T Consensus        77 VihlAa~~~~--------~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~  148 (361)
T d1kewa_          77 VMHLAAESHV--------DRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVEN  148 (361)
T ss_dssp             EEECCSCCCH--------HHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCT
T ss_pred             EEECccccch--------hhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCcccc
Confidence            9999986421        11334456789999999999999887765332     3458999999775521         


Q ss_pred             ------------CCCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCc
Q 021960          176 ------------GLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPS  243 (305)
Q Consensus       176 ------------~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (305)
                                  ......|+.+|.+.+.+++.++..+   ++.+.+++|+.+..|.....  .               -.
T Consensus       149 ~~~~~~~~e~~~~~p~s~Yg~sK~~~E~~~~~~~~~~---~i~~~~lR~~~vyGp~~~~~--~---------------~i  208 (361)
T d1kewa_         149 SVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY---GLPTIVTNCSNNYGPYHFPE--K---------------LI  208 (361)
T ss_dssp             TSCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTTCCTT--S---------------HH
T ss_pred             ccCCCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEecCceECcCCCcC--c---------------HH
Confidence                        1123569999999999999998774   79999999999887642110  0               00


Q ss_pred             HHHHHHHHHHHh--hc--CCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          244 QKEVRKMEEFVS--GL--GNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       244 ~~~~~~~~~~~~--~~--~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      ...+.++..-..  -+  +.....++..+|+|+++..++....   .|..+++..|...
T Consensus       209 ~~~i~~~~~g~~~~v~g~g~~~r~~i~v~D~a~ai~~~~~~~~---~~~~~Ni~s~~~~  264 (361)
T d1kewa_         209 PLVILNALEGKPLPIYGKGDQIRDWLYVEDHARALHMVVTEGK---AGETYNIGGHNEK  264 (361)
T ss_dssp             HHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHCC---TTCEEEECCCCEE
T ss_pred             HHHHHHHHcCCCcEEeCCCCeEEeCEEHHHHHHHHHHHHhcCC---CCCeEEECCCCCc
Confidence            111122111000  00  1122235789999999999987652   4788998877543

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.75  E-value=6.8e-17  Score=146.44  Aligned_cols=173  Identities=14%  Similarity=0.031  Sum_probs=127.1

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCc-----------------chhhhH--hhhcCCCCeEEEEecCCCHH
Q 021960           31 GKVAIITGGARGIGEAAVRLFARHGAKVVIADVED-----------------TLGSVL--ASTLAPAPVTFVHCDVSLEE   91 (305)
Q Consensus        31 ~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~-----------------~~~~~~--~~~~~~~~v~~~~~D~~d~~   91 (305)
                      |+.||||||+|.||.+++++|+++|++|++++.-.                 .....+  .....+.++.++.+|++|.+
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~   80 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFE   80 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCHH
Confidence            68999999999999999999999999999886210                 000000  01112456899999999999


Q ss_pred             HHHHHHHHHHHhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccc
Q 021960           92 DIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVA  171 (305)
Q Consensus        92 ~i~~~~~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~  171 (305)
                      .++++++..     ++|+|||.|+....     .....+.+.....+++|+.++.++++.+...   ....++++.||..
T Consensus        81 ~l~~~~~~~-----~~d~ViHlAa~~~~-----~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~---~~~~~~i~~ss~~  147 (393)
T d1i24a_          81 FLAESFKSF-----EPDSVVHFGEQRSA-----PYSMIDRSRAVYTQHNNVIGTLNVLFAIKEF---GEECHLVKLGTMG  147 (393)
T ss_dssp             HHHHHHHHH-----CCSEEEECCSCCCH-----HHHTSCHHHHHHHHHHHHHHHHHHHHHHHHH---CTTCEEEEECCGG
T ss_pred             HHHHHHHhh-----cchheecccccccc-----ccccccccccccccccccccccHHHHHHHHh---ccccceeeccccc
Confidence            999988765     79999999986421     2223466778888999999999888877553   2334566666654


Q ss_pred             cccC------------------------CCCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCcccccc
Q 021960          172 GVMG------------------------GLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSM  219 (305)
Q Consensus       172 ~~~~------------------------~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~  219 (305)
                      ....                        ......|+.+|.+.+.+++.++.++   ++.+..+.|+.+..+.
T Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~---~l~~~~lR~~~v~G~~  216 (393)
T d1i24a_         148 EYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVK  216 (393)
T ss_dssp             GGCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECSC
T ss_pred             cccccccccccccccccccccccccccccccccHHHHHhhhhccccccccccc---ceeeeecccccccCCC
Confidence            4321                        1223469999999999999888774   7899999998887764

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.74  E-value=3.8e-20  Score=151.97  Aligned_cols=153  Identities=12%  Similarity=0.107  Sum_probs=108.6

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcC-CCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           26 HRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLA-PAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        26 ~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~-~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      ..+|+||++|||||+||||+++++.|+++|++|++++|+....+.+.+.+. ..++....+|++|.+++++++       
T Consensus        18 ~~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-------   90 (191)
T d1luaa1          18 GGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAV-------   90 (191)
T ss_dssp             TSCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHT-------
T ss_pred             CCCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhccchhhhhhhcccHHHHHHHh-------
Confidence            458899999999999999999999999999999999999877766655442 234566889999998888765       


Q ss_pred             CCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCC-CCCccch
Q 021960          105 GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGG-LGPHAYT  183 (305)
Q Consensus       105 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~-~~~~~Y~  183 (305)
                      +++|+||||||..        +...+.+.|++.+++|+.+.++.+..+.+.+.... .....+++.....+. .+...|+
T Consensus        91 ~~iDilin~Ag~g--------~~~~~~e~~~~~~~~nv~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~g~~~y~  161 (191)
T d1luaa1          91 KGAHFVFTAGAIG--------LELLPQAAWQNESSIEIVADYNAQPPLGIGGIDAT-DKGKEYGGKRAFGALGIGGLKLK  161 (191)
T ss_dssp             TTCSEEEECCCTT--------CCCBCHHHHHTCTTCCEEEECCCSSSCSBTTCCTT-CEEEEETTEEEECHHHHHHHHHH
T ss_pred             cCcCeeeecCccc--------cccCCHHHHHhhhcceeehhHhhHHHHHHHhhhhc-cCcEEecceEEEeccCcCcHHHH
Confidence            5799999999863        23468899999999998776654433322221111 122222322222111 1335699


Q ss_pred             hhHHHHHHHHH
Q 021960          184 ASKHAIVGLTK  194 (305)
Q Consensus       184 ~sKaa~~~~~~  194 (305)
                      ++|+++..+++
T Consensus       162 ~sk~a~~~l~~  172 (191)
T d1luaa1         162 LHRACIAKLFE  172 (191)
T ss_dssp             HHHHHHHHHTS
T ss_pred             HHHHHHHHHHh
Confidence            99999987764

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.73  E-value=2.2e-16  Score=141.42  Aligned_cols=224  Identities=16%  Similarity=0.043  Sum_probs=152.5

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDI  109 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~  109 (305)
                      +++.||||||+|.||++++++|.++|+.|+++++........  .  .....+..+|+.+.+++.++++       .+|.
T Consensus        14 ~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~--~--~~~~~~~~~D~~~~~~~~~~~~-------~~d~   82 (363)
T d2c5aa1          14 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTE--D--MFCDEFHLVDLRVMENCLKVTE-------GVDH   82 (363)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCG--G--GTCSEEEECCTTSHHHHHHHHT-------TCSE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccchhh--h--cccCcEEEeechhHHHHHHHhh-------cCCe
Confidence            577899999999999999999999999999998754432111  1  1235678889999887766553       6899


Q ss_pred             EEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCC-------------
Q 021960          110 LYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGG-------------  176 (305)
Q Consensus       110 li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~-------------  176 (305)
                      |||.|+.....       ....+.....+..|+.++.+++.++..    .+..++|++||...+...             
T Consensus        83 Vih~a~~~~~~-------~~~~~~~~~~~~~n~~gt~~ll~~~~~----~~vk~~i~~SS~~~~~~~~~~~~~~~~~~~~  151 (363)
T d2c5aa1          83 VFNLAADMGGM-------GFIQSNHSVIMYNNTMISFNMIEAARI----NGIKRFFYASSACIYPEFKQLETTNVSLKES  151 (363)
T ss_dssp             EEECCCCCCCH-------HHHTTCHHHHHHHHHHHHHHHHHHHHH----TTCSEEEEEEEGGGSCGGGSSSSSSCEECGG
T ss_pred             Eeecccccccc-------cccccccccccccccchhhHHHHhHHh----hCccccccccccccccccccccccccccccc
Confidence            99999865321       112234566788899998777777654    555689999997765321             


Q ss_pred             -----CCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHH
Q 021960          177 -----LGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKME  251 (305)
Q Consensus       177 -----~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (305)
                           .....|+.+|.+.+.+++.+++++   ++.+..+.|+.+..+........               . ........
T Consensus       152 e~~~~~p~~~Yg~sK~~~E~~~~~~~~~~---gl~~~ilR~~~vyG~~~~~~~~~---------------~-~~~~~~~~  212 (363)
T d2c5aa1         152 DAWPAEPQDAFGLEKLATEELCKHYNKDF---GIECRIGRFHNIYGPFGTWKGGR---------------E-KAPAAFCR  212 (363)
T ss_dssp             GGSSBCCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCCSSSC---------------C-CHHHHHHH
T ss_pred             cCCcCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEeeeEeccCCcccccc---------------c-cccccccc
Confidence                 124579999999999999888774   79999999998877642111000               0 01111111


Q ss_pred             -HHHhhc-------CCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          252 -EFVSGL-------GNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       252 -~~~~~~-------~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                       ......       +...+.++..+|+++++.+++...    .|..+++.+|...
T Consensus       213 ~~~~~~~~~~~~g~g~~~rd~i~v~D~~~~~~~~~~~~----~~~~~ni~~~~~~  263 (363)
T d2c5aa1         213 KAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEMV  263 (363)
T ss_dssp             HHHHCSSCEEEESCSCCEECCEEHHHHHHHHHHHHHSS----CCSCEEECCCCCE
T ss_pred             ccccccccccccCCCCeEEEEeehhHHHHHHHHHHhCC----CCCeEEEecCCcc
Confidence             111110       122445778999999999988654    4677888877654

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.71  E-value=2.5e-16  Score=138.54  Aligned_cols=225  Identities=14%  Similarity=0.072  Sum_probs=149.8

Q ss_pred             CEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcch--hhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 021960           32 KVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTL--GSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDI  109 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~--~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~  109 (305)
                      |+||||||+|.||++++++|+++|++|+.++|....  ...+.......++.++.+|++|.+++.+++...     ..++
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~~~   75 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKA-----QPQE   75 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHH-----CCSE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHHhcccCCcEEEEccccChHHhhhhhccc-----cccc
Confidence            689999999999999999999999999999886433  222333333456899999999999999887765     5788


Q ss_pred             EEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccC------------CC
Q 021960          110 LYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMG------------GL  177 (305)
Q Consensus       110 li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~------------~~  177 (305)
                      ++|+|+.....        ...+...+.+..|+.++.++++++...   ....++++.||.. ..+            ..
T Consensus        76 ~~~~a~~~~~~--------~~~~~~~~~~~~n~~g~~~~l~~~~~~---~~~~~~i~~Ss~~-~~~~~~~~~~~E~~~~~  143 (321)
T d1rpna_          76 VYNLAAQSFVG--------ASWNQPVTTGVVDGLGVTHLLEAIRQF---SPETRFYQASTSE-MFGLIQAERQDENTPFY  143 (321)
T ss_dssp             EEECCSCCCHH--------HHTTSHHHHHHHHTHHHHHHHHHHHHH---CTTSEEEEEEEGG-GGCSCSSSSBCTTSCCC
T ss_pred             ccccccccccc--------ccccchHHHHhhhhhchHHHHHHHHHh---CCCcccccccchh-hcCcccCCCCCCCCCcc
Confidence            88888754221        122345677899999998888777553   2234566655543 322            12


Q ss_pred             CCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHh-h
Q 021960          178 GPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVS-G  256 (305)
Q Consensus       178 ~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  256 (305)
                      ....|+.+|.+.+.+++.++.++   ++.+..+.|+.+..|........                 ......+..... .
T Consensus       144 p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lr~~~vyGp~~~~~~~~-----------------~~i~~~~~~~~~~~  203 (321)
T d1rpna_         144 PRSPYGVAKLYGHWITVNYRESF---GLHASSGILFNHESPLRGIEFVT-----------------RKVTDAVARIKLGK  203 (321)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTSCTTSHH-----------------HHHHHHHHHHHTTS
T ss_pred             ccChhHHHHHHHHHHHHHHHhhc---CCcEEEEEEecccCCCccccccH-----------------HHHHHHHHHHHhCC
Confidence            34689999999999999988774   68888888887766642110000                 000111111111 0


Q ss_pred             -----c--CCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCcc
Q 021960          257 -----L--GNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT  297 (305)
Q Consensus       257 -----~--~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~  297 (305)
                           +  +...+.++..+|+++++..++....    +..+++.+|..
T Consensus       204 ~~~i~~g~g~~~r~~i~v~D~~~~~~~~~~~~~----~~~~ni~~~~~  247 (321)
T d1rpna_         204 QQELRLGNVDAKRDWGFAGDYVEAMWLMLQQDK----ADDYVVATGVT  247 (321)
T ss_dssp             CSCEEESCTTCEEECEEHHHHHHHHHHHHHSSS----CCCEEECCSCE
T ss_pred             CCcEEECCCCeEEccEEeHHHHHHHHHHHhcCC----cCCceeccccc
Confidence                 0  1122346899999999999886542    34566666643

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.71  E-value=1.6e-16  Score=141.53  Aligned_cols=168  Identities=18%  Similarity=0.114  Sum_probs=123.0

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhh----cCCCCeEEEEecCCCHHHHHHHHHHHHHhcC
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLAST----LAPAPVTFVHCDVSLEEDIENLINSTVSRYG  105 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~----~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g  105 (305)
                      .||+||||||+|.||.+++++|+++|++|+.+.|+......+...    ........+..|++|.++++.++.       
T Consensus        10 ~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   82 (342)
T d1y1pa1          10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIK-------   82 (342)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTT-------
T ss_pred             CcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcc-------
Confidence            489999999999999999999999999999988876554433221    123334567789999887776553       


Q ss_pred             CccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCC---------
Q 021960          106 RLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGG---------  176 (305)
Q Consensus       106 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~---------  176 (305)
                      ..|+++|+++....        ..+   ....+..|+.++.++++.+..   ..+..++|++||..+....         
T Consensus        83 ~~~~v~~~a~~~~~--------~~~---~~~~~~~nv~gt~~ll~~~~~---~~~v~~~i~~SS~~~~~~~~~~~~~~~~  148 (342)
T d1y1pa1          83 GAAGVAHIASVVSF--------SNK---YDEVVTPAIGGTLNALRAAAA---TPSVKRFVLTSSTVSALIPKPNVEGIYL  148 (342)
T ss_dssp             TCSEEEECCCCCSC--------CSC---HHHHHHHHHHHHHHHHHHHHT---CTTCCEEEEECCGGGTCCCCTTCCCCEE
T ss_pred             cchhhhhhcccccc--------ccc---ccccccchhhhHHHHHHhhhc---ccccccccccccceeeccCCCCCCCccc
Confidence            68999999986432        122   344567899998777776543   1345789999997643211         


Q ss_pred             ----------------------CCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCcccccc
Q 021960          177 ----------------------LGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSM  219 (305)
Q Consensus       177 ----------------------~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~  219 (305)
                                            .....|+.+|.+.+.+++.++++.. .++++..++|+.+..+.
T Consensus       149 ~e~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~-~~~~~~~i~p~~v~Gp~  212 (342)
T d1y1pa1         149 DEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENK-PHFTLNAVLPNYTIGTI  212 (342)
T ss_dssp             CTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHC-CSSEEEEEEESEEECCC
T ss_pred             cccccccccccccccccccCCCCCcCcccchhHhHHHHHHHhhhhcc-cccccceecccceeCCC
Confidence                                  1124699999999999999988764 46888889998886653

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.70  E-value=2.9e-16  Score=138.07  Aligned_cols=220  Identities=14%  Similarity=0.065  Sum_probs=143.5

Q ss_pred             CEEEEecCCCchHHHHHHHHHHcCCeEEEEecCc-chhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEE
Q 021960           32 KVAIITGGARGIGEAAVRLFARHGAKVVIADVED-TLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDIL  110 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~-~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~l  110 (305)
                      |.||||||+|.||+++++.|+++|++|+.+++.. .....+.......++.....|+.+.            ...++|+|
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~~------------~~~~~d~V   69 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEP------------LYIEVDQI   69 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSC------------CCCCCSEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHHHhcCCCceEEEehHHHHH------------HHcCCCEE
Confidence            7899999999999999999999999999987632 2222222223334566666665431            12369999


Q ss_pred             EEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccC---------------
Q 021960          111 YNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMG---------------  175 (305)
Q Consensus       111 i~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~---------------  175 (305)
                      ||+|+.....     .   ..++..+.+++|+.++.++++++..    .+ .++|++||.+.+..               
T Consensus        70 ihlAa~~~~~-----~---~~~~~~~~~~~Nv~g~~~ll~~~~~----~~-~k~I~~SS~~vy~~~~~~~~~e~~~~~~~  136 (312)
T d2b69a1          70 YHLASPASPP-----N---YMYNPIKTLKTNTIGTLNMLGLAKR----VG-ARLLLASTSEVYGDPEVHPQSEDYWGHVN  136 (312)
T ss_dssp             EECCSCCSHH-----H---HTTCHHHHHHHHHHHHHHHHHHHHH----HT-CEEEEEEEGGGGBSCSSSSBCTTCCCBCC
T ss_pred             EECcccCCch-----h---HHhCHHHHHHHHHHHHHHHHHHHHH----cC-CcEEEEEChheecCCCCCCCCccccCCCC
Confidence            9999864321     0   1123466789999999888887643    22 47999998655421               


Q ss_pred             -CCCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHH
Q 021960          176 -GLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFV  254 (305)
Q Consensus       176 -~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (305)
                       ......|+.+|.+.+.+++.+++.+   |+.+..++|+.+..|........               -....+..+..-.
T Consensus       137 ~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~vyGp~~~~~~~~---------------~i~~~i~~~~~g~  198 (312)
T d2b69a1         137 PIGPRACYDEGKRVAETMCYAYMKQE---GVEVRVARIFNTFGPRMHMNDGR---------------VVSNFILQALQGE  198 (312)
T ss_dssp             SSSTTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTCCTTCCC---------------HHHHHHHHHHHTC
T ss_pred             CCCCccHHHHHHHHHHHHHHHHHHHh---CCcEEEEEeeeEECCCCCCCCcc---------------HHHHHHHHHHcCC
Confidence             1234679999999999999998874   79999999999987642110000               0001111111100


Q ss_pred             h----hcCCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          255 S----GLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       255 ~----~~~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      .    +-+.....++..+|++++++.++...    .+..+++.+|...
T Consensus       199 ~i~i~~~g~~~r~~i~v~D~~~~~~~~~~~~----~~~~~n~~~~~~~  242 (312)
T d2b69a1         199 PLTVYGSGSQTRAFQYVSDLVNGLVALMNSN----VSSPVNLGNPEEH  242 (312)
T ss_dssp             CEEEESSSCCEEECEEHHHHHHHHHHHHTSS----CCSCEEESCCCEE
T ss_pred             CeEEeCCCCeeEccEEHHHHHHHHHHHHhhc----cCCceEecCCccc
Confidence            0    01122335678999999999888654    3556788777554

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.70  E-value=7.9e-16  Score=136.18  Aligned_cols=172  Identities=17%  Similarity=0.064  Sum_probs=125.7

Q ss_pred             CEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcc-----hhhhH---hhhcCCCCeEEEEecCCCHHHHHHHHHHHHHh
Q 021960           32 KVAIITGGARGIGEAAVRLFARHGAKVVIADVEDT-----LGSVL---ASTLAPAPVTFVHCDVSLEEDIENLINSTVSR  103 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~-----~~~~~---~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~  103 (305)
                      |++|||||||.||++++++|+++|+.|+.++|...     +...+   ........+.++.+|+++.+++++.++..   
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~---   78 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVI---   78 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHH---
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhh---
Confidence            79999999999999999999999999999988532     11111   11112356889999999999999888754   


Q ss_pred             cCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-CCEEEEecccccccC-------
Q 021960          104 YGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRG-GGCIISTASVAGVMG-------  175 (305)
Q Consensus       104 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~-------  175 (305)
                        ++|+|||+|+....        ....++....+..|+.+...++.++.....+.. ..+++..||......       
T Consensus        79 --~~D~Vih~Aa~~~~--------~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~~~~~~E  148 (339)
T d1n7ha_          79 --KPDEVYNLAAQSHV--------AVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSE  148 (339)
T ss_dssp             --CCSEEEECCSCCCH--------HHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCT
T ss_pred             --ccchhhhccccccc--------cccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccCCCCCCC
Confidence              79999999986432        113355677889999999888888765544432 345555555443221       


Q ss_pred             ---CCCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCcccccc
Q 021960          176 ---GLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSM  219 (305)
Q Consensus       176 ---~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~  219 (305)
                         ......|+.+|.+.+.+++.+++.+   ++.+..+.|+.+..|.
T Consensus       149 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~vyGp~  192 (339)
T d1n7ha_         149 TTPFHPRSPYAASKCAAHWYTVNYREAY---GLFACNGILFNHESPR  192 (339)
T ss_dssp             TSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTT
T ss_pred             CCCCCCcchhhHHHHHHHHHHHHHHHHh---CCCEEEEEEccccCCC
Confidence               1235689999999999999988774   7999999998887764

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.70  E-value=1.4e-15  Score=125.60  Aligned_cols=199  Identities=15%  Similarity=0.139  Sum_probs=132.1

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 021960           29 LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLD  108 (305)
Q Consensus        29 l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id  108 (305)
                      |..|+|+||||||+||++++++|+++|++|.++.|+..+....    ....+.++.+|++|.+++.++++       ..|
T Consensus         1 m~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~----~~~~~~~~~gD~~d~~~l~~al~-------~~d   69 (205)
T d1hdoa_           1 MAVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE----GPRPAHVVVGDVLQAADVDKTVA-------GQD   69 (205)
T ss_dssp             CCCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS----SCCCSEEEESCTTSHHHHHHHHT-------TCS
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcccc----cccccccccccccchhhHHHHhc-------CCC
Confidence            4568899999999999999999999999999999986653322    23458899999999998887765       589


Q ss_pred             EEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCC----Cccchh
Q 021960          109 ILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLG----PHAYTA  184 (305)
Q Consensus       109 ~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~----~~~Y~~  184 (305)
                      +|||++|.....      ...         +++..+..+    ++..+.+.+-.++|++||.......+.    ...|..
T Consensus        70 ~vi~~~g~~~~~------~~~---------~~~~~~~~~----l~~aa~~~~v~r~i~~ss~~~~~~~~~~~~~~~~~~~  130 (205)
T d1hdoa_          70 AVIVLLGTRNDL------SPT---------TVMSEGARN----IVAAMKAHGVDKVVACTSAFLLWDPTKVPPRLQAVTD  130 (205)
T ss_dssp             EEEECCCCTTCC------SCC---------CHHHHHHHH----HHHHHHHHTCCEEEEECCGGGTSCTTCSCGGGHHHHH
T ss_pred             EEEEEeccCCch------hhh---------hhhHHHHHH----HHHHHHhcCCCeEEEEeeeeccCCCccccccccccch
Confidence            999999874321      111         122333333    334455566779999998765443222    234555


Q ss_pred             hHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCC
Q 021960          185 SKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTT  264 (305)
Q Consensus       185 sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (305)
                      .|...+.+.       ...++....|.||.+...........               +.             -+.....+
T Consensus       131 ~~~~~e~~l-------~~~~~~~tiirp~~~~~~~~~~~~~~---------------~~-------------~~~~~~~~  175 (205)
T d1hdoa_         131 DHIRMHKVL-------RESGLKYVAVMPPHIGDQPLTGAYTV---------------TL-------------DGRGPSRV  175 (205)
T ss_dssp             HHHHHHHHH-------HHTCSEEEEECCSEEECCCCCSCCEE---------------ES-------------SSCSSCSE
T ss_pred             HHHHHHHHH-------HhcCCceEEEecceecCCCCcccEEE---------------ee-------------CCCCCCCc
Confidence            565555433       24689999999998854321110000               00             01223456


Q ss_pred             CCHHHHHHHHHHhccCCCCceeccEEEecC
Q 021960          265 LRSKDIAEAALYLASDESRYVSGHNLVVDG  294 (305)
Q Consensus       265 ~~~~dva~~v~~l~s~~~~~~tG~~i~idg  294 (305)
                      ++.+|+|+.++.++.+..  ..|+.+.+-+
T Consensus       176 i~~~DvA~~~~~~l~~~~--~~g~~~~~s~  203 (205)
T d1hdoa_         176 ISKHDLGHFMLRCLTTDE--YDGHSTYPSH  203 (205)
T ss_dssp             EEHHHHHHHHHHTTSCST--TTTCEEEEEC
T ss_pred             CCHHHHHHHHHHHhCCCC--CCCEEEecCC
Confidence            789999999999997653  3488776643

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.69  E-value=8.4e-16  Score=136.70  Aligned_cols=237  Identities=15%  Similarity=0.107  Sum_probs=153.7

Q ss_pred             CEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcc------h-hh--hHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHH
Q 021960           32 KVAIITGGARGIGEAAVRLFARHGAKVVIADVEDT------L-GS--VLASTLAPAPVTFVHCDVSLEEDIENLINSTVS  102 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~------~-~~--~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~  102 (305)
                      |+||||||+|.||.+++++|+++|+.|+++++...      . ..  .........++.++.+|++|.+++.+++...  
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~--   80 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKY--   80 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHC--
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeecccccccccccccc--
Confidence            68899999999999999999999999998864111      0 11  1111223567899999999999998877643  


Q ss_pred             hcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCC------
Q 021960          103 RYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGG------  176 (305)
Q Consensus       103 ~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~------  176 (305)
                         .+++++|+|+....        ..+.++..+.+++|+.++.++++++..    .+-.+++++||.......      
T Consensus        81 ---~~~~i~h~Aa~~~~--------~~~~~~p~~~~~~Nv~gt~~l~~~~~~----~~v~~~i~~ss~~~~~~~~~~~~~  145 (346)
T d1ek6a_          81 ---SFMAVIHFAGLKAV--------GESVQKPLDYYRVNLTGTIQLLEIMKA----HGVKNLVFSSSATVYGNPQYLPLD  145 (346)
T ss_dssp             ---CEEEEEECCSCCCH--------HHHHHCHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEEEEGGGGCSCSSSSBC
T ss_pred             ---ccccccccccccCc--------HhhHhCHHHHHHhhhcccccccchhhh----cCcccccccccceeeecccccccc
Confidence               68899999996432        113344567789999998877776643    455678888876654321      


Q ss_pred             ------CCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHH
Q 021960          177 ------LGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKM  250 (305)
Q Consensus       177 ------~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (305)
                            .....|+.+|.+.+..++.+++.  ..++....+.|+.+..+.....+....          .+.+. ..+..+
T Consensus       146 ~~~~~~~~~~~Y~~~k~~~e~~~~~~~~~--~~~~~~~~lR~~~v~G~~~~~~~~~~~----------~~~~~-~~~~~~  212 (346)
T d1ek6a_         146 EAHPTGGCTNPYGKSKFFIEEMIRDLCQA--DKTWNAVLLRYFNPTGAHASGCIGEDP----------QGIPN-NLMPYV  212 (346)
T ss_dssp             TTSCCCCCSSHHHHHHHHHHHHHHHHHHH--CTTCEEEEEEECEEECCCTTSSCCCCC----------SSSCC-SHHHHH
T ss_pred             ccccccccCChHHHHHHHHHHHHHHHHHh--ccCCceEEEeecceeccCCCCCcCccc----------cccHH-HHHHHH
Confidence                  13457999999999998887654  357888888888776653211111000          00000 011111


Q ss_pred             HH-HHhh--------------cCCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          251 EE-FVSG--------------LGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       251 ~~-~~~~--------------~~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      .. ....              .+...+.++.++|+|..+..+.........++++++.+|...
T Consensus       213 ~~~~~~~~~~i~i~g~~~~~~~g~~~Rdfi~v~D~a~~~~~~~~~~~~~~~~~i~Ni~~~~~~  275 (346)
T d1ek6a_         213 SQVAIGRREALNVFGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGY  275 (346)
T ss_dssp             HHHHHTSSSCEEEECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCE
T ss_pred             HHHHHcCCCcEEEcCCcccCCCCCeeEeEEEEEeccchhhhhccccccccCceEEEeCCCCcc
Confidence            11 1100              011123468999999988877554434456889999887654

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.69  E-value=1.1e-15  Score=135.88  Aligned_cols=170  Identities=13%  Similarity=-0.003  Sum_probs=123.2

Q ss_pred             CEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchh-----hhHh---hhcCCCCeEEEEecCCCHHHHHHHHHHHHHh
Q 021960           32 KVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLG-----SVLA---STLAPAPVTFVHCDVSLEEDIENLINSTVSR  103 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~-----~~~~---~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~  103 (305)
                      |++|||||+|.||.+++++|.++|++|+.++|.....     +.+.   ......++.++.+|++|.+.+..+++..   
T Consensus         2 KI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---   78 (347)
T d1t2aa_           2 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV---   78 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH---
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhc---
Confidence            3459999999999999999999999999998854321     1110   0112346899999999999999988765   


Q ss_pred             cCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEeccccccc---------
Q 021960          104 YGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVM---------  174 (305)
Q Consensus       104 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~---------  174 (305)
                        .+++++|.++....        ....+.....+++|+.++.++++++..... .+..++|++||.+-+-         
T Consensus        79 --~~~~v~~~~a~~~~--------~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~-~~~~~~i~~SS~~vyg~~~~~~~~E  147 (347)
T d1t2aa_          79 --KPTEIYNLGAQSHV--------KISFDLAEYTADVDGVGTLRLLDAVKTCGL-INSVKFYQASTSELYGKVQEIPQKE  147 (347)
T ss_dssp             --CCSEEEECCSCCCH--------HHHHHSHHHHHHHHTHHHHHHHHHHHHTTC-TTTCEEEEEEEGGGTCSCSSSSBCT
T ss_pred             --ccceeeeeeecccc--------chhhccchhhhhhHHHHHHHHHHHHHHcCC-CCCcEEEEecchheecCCCCCCCCC
Confidence              68899999886422        123455566789999999888877755321 2335899999865431         


Q ss_pred             --CCCCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccc
Q 021960          175 --GGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATS  218 (305)
Q Consensus       175 --~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~  218 (305)
                        +..+...|+.+|.+.+.+++.++..+   ++.+..++|+.+..|
T Consensus       148 ~~~~~P~~~Yg~sK~~aE~~~~~~~~~~---~~~~~ilr~~~vyGp  190 (347)
T d1t2aa_         148 TTPFYPRSPYGAAKLYAYWIVVNFREAY---NLFAVNGILFNHESP  190 (347)
T ss_dssp             TSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECT
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEecceeCC
Confidence              11234579999999999999887774   688888898877665

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.69  E-value=8.2e-16  Score=135.63  Aligned_cols=229  Identities=18%  Similarity=0.198  Sum_probs=144.3

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEEecCcc--hhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEE
Q 021960           33 VAIITGGARGIGEAAVRLFARHGAKVVIADVEDT--LGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDIL  110 (305)
Q Consensus        33 ~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~--~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~l  110 (305)
                      .||||||+|.||++++++|+++|++|+++++-..  ....+.......++.++.+|++|.+++.++++..     ++|+|
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~~~~~l~~~~~~~-----~~d~V   76 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKY-----MPDSC   76 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHH-----CCSEE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhccCCcEEEEcccCCHHHHHHHHHhc-----CCceE
Confidence            5899999999999999999999999998864221  1222222223456899999999999999888765     69999


Q ss_pred             EEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCC--------------
Q 021960          111 YNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGG--------------  176 (305)
Q Consensus       111 i~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~--------------  176 (305)
                      ||+|+.....        ...++..+.+++|+.++.++++.+..    .+..++++.||.....+.              
T Consensus        77 ih~aa~~~~~--------~~~~~~~~~~~~Nv~gt~nll~~~~~----~~~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~  144 (338)
T d1orra_          77 FHLAGQVAMT--------TSIDNPCMDFEINVGGTLNLLEAVRQ----YNSNCNIIYSSTNKVYGDLEQYKYNETETRYT  144 (338)
T ss_dssp             EECCCCCCHH--------HHHHCHHHHHHHHHHHHHHHHHHHHH----HCTTCEEEEEEEGGGGTTCTTSCEEECSSCEE
T ss_pred             Eeeccccccc--------ccccChHHHHHHHHHHHHHHHHhhhc----cccccccccccccccccccccccccccccccc
Confidence            9999875321        12345678899999999988887655    344455666665543321              


Q ss_pred             --------------CCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCC
Q 021960          177 --------------LGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIP  242 (305)
Q Consensus       177 --------------~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~  242 (305)
                                    .....|+.+|...+.+.......+   ++....+.|..+..+........             ...
T Consensus       145 ~~~~~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~-------------~~~  208 (338)
T d1orra_         145 CVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIF---GLNTVVFRHSSMYGGRQFATYDQ-------------GWV  208 (338)
T ss_dssp             ETTCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTCCCBTTB-------------CHH
T ss_pred             ccccccCcccCCccccccccccccchhhhhhhhhhhcc---Ccccccccccceeeccccccccc-------------ccc
Confidence                          134579999999999998888876   34444333332222110000000             000


Q ss_pred             cHHHHHHHHHHHhhc---------CCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCc
Q 021960          243 SQKEVRKMEEFVSGL---------GNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGV  296 (305)
Q Consensus       243 ~~~~~~~~~~~~~~~---------~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~  296 (305)
                       ..............         +.....+...+|++++++.++... ....|+++++.+|.
T Consensus       209 -~~~~~~~~~~~~~~~~~~~~~g~g~~~r~~~~v~D~~~~~~~~l~~~-~~~~~~~~~i~~~~  269 (338)
T d1orra_         209 -GWFCQKAVEIKNGINKPFTISGNGKQVRDVLHAEDMISLYFTALANV-SKIRGNAFNIGGTI  269 (338)
T ss_dssp             -HHHHHHHHHHHTTCCCCEEEESSSCCEEECEEHHHHHHHHHHHHHTH-HHHTTCEEEESSCG
T ss_pred             -chhhHHHHHHHhccCCceEEeCCCceeEeeecccchhhHHHHHHhcc-ccccCccccccccc
Confidence             01111111111110         112234567899999999887553 23568888887664

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.69  E-value=3.8e-16  Score=139.17  Aligned_cols=169  Identities=16%  Similarity=0.147  Sum_probs=124.4

Q ss_pred             CEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcch-hhh--HhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 021960           32 KVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTL-GSV--LASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLD  108 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~-~~~--~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id  108 (305)
                      |+||||||+|.||++++++|+++|++|+++++.... ...  ........++.++.+|++|.++++++++..     ++|
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~-----~~d   76 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEY-----KID   76 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHS-----CCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhcc-----CCC
Confidence            789999999999999999999999999998753221 111  112223456889999999999999887643     699


Q ss_pred             EEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccC-------------
Q 021960          109 ILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMG-------------  175 (305)
Q Consensus       109 ~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~-------------  175 (305)
                      +|||+|+.....        ...+.....+.+|+.++.++++++..    .+..++|++||...+-.             
T Consensus        77 ~VihlAa~~~~~--------~~~~~~~~~~~~N~~~t~~ll~~~~~----~~i~~~i~~SS~~vyg~~~~~~~~~~~~e~  144 (347)
T d1z45a2          77 SVIHFAGLKAVG--------ESTQIPLRYYHNNILGTVVLLELMQQ----YNVSKFVFSSSATVYGDATRFPNMIPIPEE  144 (347)
T ss_dssp             EEEECCSCCCHH--------HHHHSHHHHHHHHHHHHHHHHHHHHH----HTCCEEEEEEEGGGGCCGGGSTTCCSBCTT
T ss_pred             EEEEcccccccc--------ccccCcccccccchhhhHHHHHHHHh----cccceEEeecceeeecCcccCCCCCccccc
Confidence            999999965321        12344567788999999888888754    34458999999765421             


Q ss_pred             --CCCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccc
Q 021960          176 --GLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATS  218 (305)
Q Consensus       176 --~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~  218 (305)
                        ..+...|+.+|.+.+.+++.+.... ..++.+..+.|+.+..+
T Consensus       145 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~~~lR~~~v~g~  188 (347)
T d1z45a2         145 CPLGPTNPYGHTKYAIENILNDLYNSD-KKSWKFAILRYFNPIGA  188 (347)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHHHHS-TTSCEEEEEEECEEECC
T ss_pred             cCCCCCChhHhHHHHHHHHHHHHHHhh-ccCCcEEEEeecceEee
Confidence              1134579999999999998887653 35688888887766544

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.68  E-value=1.2e-15  Score=135.37  Aligned_cols=229  Identities=16%  Similarity=0.054  Sum_probs=154.4

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchh----hhHhhh---cCCCCeEEEEecCCCHHHHHHHHHHHHH
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLG----SVLAST---LAPAPVTFVHCDVSLEEDIENLINSTVS  102 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~----~~~~~~---~~~~~v~~~~~D~~d~~~i~~~~~~~~~  102 (305)
                      +.|++|||||||.||++++++|.++|++|+.++|.....    ......   ....++.++.+|..|........     
T Consensus        15 ~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~-----   89 (341)
T d1sb8a_          15 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNAC-----   89 (341)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHH-----
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeecccccccccccc-----
Confidence            568999999999999999999999999999997632211    111111   11245889999999987666443     


Q ss_pred             hcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccC-------
Q 021960          103 RYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMG-------  175 (305)
Q Consensus       103 ~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~-------  175 (305)
                        ...+.++|.++....        ....++....+++|+.++.++++.+..    .+..++|++||.+.+..       
T Consensus        90 --~~~~~v~~~~a~~~~--------~~~~~~~~~~~~~Nv~gt~~ll~~~~~----~~~~~~i~~SS~~vyg~~~~~~~~  155 (341)
T d1sb8a_          90 --AGVDYVLHQAALGSV--------PRSINDPITSNATNIDGFLNMLIAARD----AKVQSFTYAASSSTYGDHPGLPKV  155 (341)
T ss_dssp             --TTCSEEEECCSCCCH--------HHHHHCHHHHHHHHTHHHHHHHHHHHH----TTCSEEEEEEEGGGGTTCCCSSBC
T ss_pred             --ccccccccccccccc--------cccccCccchhheeehhHHHHHHHHHh----cCCceEEEcccceeeCCCCCCCcc
Confidence              267889988875321        124566778899999999988887754    45568999999775532       


Q ss_pred             ----CCCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHH
Q 021960          176 ----GLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKME  251 (305)
Q Consensus       176 ----~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (305)
                          ......|+.+|.+.+.+++.+++..   ++++..+.|+.+.++........                ..-......
T Consensus       156 E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~i~~~ilR~~~v~G~~~~~~~~~----------------~~~i~~~~~  216 (341)
T d1sb8a_         156 EDTIGKPLSPYAVTKYVNELYADVFSRCY---GFSTIGLRYFNVFGRRQDPNGAY----------------AAVIPKWTS  216 (341)
T ss_dssp             TTCCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECCEECTTCCCCSTT----------------CCHHHHHHH
T ss_pred             CCCCCCCCCcchHHHHHHHHHHHHHHHHh---CCCeEEEEeceeeccCcCCCCch----------------hhhHHHHHH
Confidence                1234789999999999999988774   68889999998877642211000                000001111


Q ss_pred             HHHhhc-------CCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCcc
Q 021960          252 EFVSGL-------GNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVT  297 (305)
Q Consensus       252 ~~~~~~-------~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~  297 (305)
                      ....+-       +.....++-++|++.++..++..... ..|+.+++..+..
T Consensus       217 ~~~~g~~i~~~g~g~~~r~~i~v~D~~~a~~~~~~~~~~-~~~~~~~~~~~~~  268 (341)
T d1sb8a_         217 SMIQGDDVYINGDGETSRDFCYIENTVQANLLAATAGLD-ARNQVYNIAVGGR  268 (341)
T ss_dssp             HHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTCCGG-GCSEEEEESCSCC
T ss_pred             HHHcCCceEEcCCCCEEEEEEEEeccchhhhhhhhcccc-ccceeeeeccccc
Confidence            211110       12234577889999998887765432 4677888776643

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=99.67  E-value=2.5e-15  Score=133.34  Aligned_cols=226  Identities=15%  Similarity=0.083  Sum_probs=150.5

Q ss_pred             EEEEecCCCchHHHHHHHHHHcC-CeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEEE
Q 021960           33 VAIITGGARGIGEAAVRLFARHG-AKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILY  111 (305)
Q Consensus        33 ~vlVtGas~giG~~ia~~l~~~g-~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~li  111 (305)
                      +||||||||.||++++++|+++| ++|+.+++........   ....++.++.+|+++.+++.+.+.   +   .+|+||
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~---~~~~~~~~i~~Di~~~~~~~~~~~---~---~~d~Vi   72 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRF---LNHPHFHFVEGDISIHSEWIEYHV---K---KCDVVL   72 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGG---TTCTTEEEEECCTTTCSHHHHHHH---H---HCSEEE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhh---ccCCCeEEEECccCChHHHHHHHH---h---CCCccc
Confidence            58999999999999999999998 5788887765443322   234679999999998766554322   1   489999


Q ss_pred             EcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCC---------------
Q 021960          112 NNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGG---------------  176 (305)
Q Consensus       112 ~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~---------------  176 (305)
                      |+|+.....        ...++..+.+.+|+.++.++++.+..    . +.++++.||...+...               
T Consensus        73 h~a~~~~~~--------~~~~~~~~~~~~nv~gt~~ll~~~~~----~-~~~~~~~ss~~~~~~~~~~~~~~~~~~~~~~  139 (342)
T d2blla1          73 PLVAIATPI--------EYTRNPLRVFELDFEENLRIIRYCVK----Y-RKRIIFPSTSEVYGMCSDKYFDEDHSNLIVG  139 (342)
T ss_dssp             ECBCCCCHH--------HHHHSHHHHHHHHTHHHHHHHHHHHH----T-TCEEEEECCGGGGBTCCCSSBCTTTCCCBCC
T ss_pred             ccccccccc--------ccccCCcccccccccccccccccccc----c-ccccccccccccccccccccccccccccccc
Confidence            999975321        13344567889999999888888644    2 3456677765544321               


Q ss_pred             ---CCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHH
Q 021960          177 ---LGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEF  253 (305)
Q Consensus       177 ---~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (305)
                         .....|+.+|.+.+.+++.+++.+   |+.+..+.|..+..+..........            .........+.+.
T Consensus       140 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~r~~~~~g~~~~~~~~~~~------------~~~~~~~~~~~~~  204 (342)
T d2blla1         140 PVNKPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGPRLDNLNAARI------------GSSRAITQLILNL  204 (342)
T ss_dssp             CTTCGGGHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEECSSCCCTTCSBS------------CBCHHHHHHHHHH
T ss_pred             ccCCCcchhhhcccchhhhhhhhhccc---CceeEEeeccccccccccccccccc------------cccccchHHHHHH
Confidence               123579999999999999988874   7888899888887764322211100            0111111111221


Q ss_pred             Hhh-------cCCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCC
Q 021960          254 VSG-------LGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGG  295 (305)
Q Consensus       254 ~~~-------~~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG  295 (305)
                      ..+       -+.....++..+|+++++..++.....-..|+++++.+|
T Consensus       205 ~~g~~~~~~~~g~~~r~~i~v~D~~~a~~~~~~~~~~~~~g~~~Nig~~  253 (342)
T d2blla1         205 VEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNP  253 (342)
T ss_dssp             HHTCCEEEGGGSCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCT
T ss_pred             HhCCCccccCCCCeeeeecccccccceeeeehhhccccCCCeEEEEecc
Confidence            111       012233477999999999999876543345899998544

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=99.67  E-value=7.5e-17  Score=142.33  Aligned_cols=224  Identities=17%  Similarity=0.102  Sum_probs=151.8

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEE------EEecCc--chhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           33 VAIITGGARGIGEAAVRLFARHGAKVV------IADVED--TLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        33 ~vlVtGas~giG~~ia~~l~~~g~~vv------~~~r~~--~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      .||||||+|.||+++++.|+++|+.|.      ..+...  .....+.......++.++..|.++........       
T Consensus         2 kIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-------   74 (322)
T d1r6da_           2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLAREL-------   74 (322)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHT-------
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhhhhhcCCCeEEEEeccccchhhhccc-------
Confidence            589999999999999999999997643      333211  11111222223467999999999987666443       


Q ss_pred             CCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCC--------
Q 021960          105 GRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGG--------  176 (305)
Q Consensus       105 g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~--------  176 (305)
                      ..+|.++|+|+....        ........+.+++|+.++.++++.+..    .+..++|++||.+.+.+.        
T Consensus        75 ~~~d~vi~~a~~~~~--------~~~~~~~~~~~~~N~~gt~~ll~~~~~----~~~~~~I~~Ss~~~yg~~~~~~~~E~  142 (322)
T d1r6da_          75 RGVDAIVHFAAESHV--------DRSIAGASVFTETNVQGTQTLLQCAVD----AGVGRVVHVSTNQVYGSIDSGSWTES  142 (322)
T ss_dssp             TTCCEEEECCSCCCH--------HHHHHCCHHHHHHHTHHHHHHHHHHHH----TTCCEEEEEEEGGGGCCCSSSCBCTT
T ss_pred             cccceEEeecccccc--------cccccchHHHhhhhHHHHHHHHHHHHH----cCCceEEEeecceeecCCCCCCCCCC
Confidence            368999999986422        123455677789999999888887754    455689999987765322        


Q ss_pred             ---CCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHH
Q 021960          177 ---LGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEF  253 (305)
Q Consensus       177 ---~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (305)
                         .....|+.+|.+.+.+++.+++++   ++.+..+.|+.+..|.....  .               .....+.....-
T Consensus       143 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~vyGp~~~~~--~---------------~i~~~i~~~~~~  202 (322)
T d1r6da_         143 SPLEPNSPYAASKAGSDLVARAYHRTY---GLDVRITRCCNNYGPYQHPE--K---------------LIPLFVTNLLDG  202 (322)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTTCCTT--S---------------HHHHHHHHHHTT
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEeeeEECcCCCcC--c---------------HHHHHHHHHHcC
Confidence               234689999999999999998874   79999999999987631100  0               000111111110


Q ss_pred             --Hhhc--CCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          254 --VSGL--GNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       254 --~~~~--~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                        ..-+  +.....++..+|+|+++..++....   .|+++++..|...
T Consensus       203 ~~i~v~~~g~~~r~~i~v~D~a~ai~~~~~~~~---~~~~~ni~~~~~~  248 (322)
T d1r6da_         203 GTLPLYGDGANVREWVHTDDHCRGIALVLAGGR---AGEIYHIGGGLEL  248 (322)
T ss_dssp             CCEEEETTSCCEEEEEEHHHHHHHHHHHHHHCC---TTCEEEECCCCEE
T ss_pred             CCcEEecCCCeEEccEEHHHHHHHHHHHHhCCC---CCCeeEEeecccc
Confidence              0000  1223346799999999999997653   5889998877544

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.66  E-value=1.4e-15  Score=135.36  Aligned_cols=222  Identities=14%  Similarity=0.091  Sum_probs=144.4

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCc---chhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 021960           31 GKVAIITGGARGIGEAAVRLFARHGAKVVIADVED---TLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRL  107 (305)
Q Consensus        31 ~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~---~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~i  107 (305)
                      .|.||||||||.||++++++|.++|+.|.++.++.   .............++.++.+|+.|.+.+..+++       ..
T Consensus         2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~Di~d~~~~~~~~~-------~~   74 (346)
T d1oc2a_           2 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAA-------KA   74 (346)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHT-------TC
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHHhhcCCeEEEEccCCCHHHHHHHHh-------hh
Confidence            47899999999999999999999998755443321   111111122345679999999999988887764       57


Q ss_pred             cEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccC------------
Q 021960          108 DILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMG------------  175 (305)
Q Consensus       108 d~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~------------  175 (305)
                      +.++|.|+.....        ....+..+.+++|+.++.+++..+...     +.++|++||.+.+-.            
T Consensus        75 ~~v~~~a~~~~~~--------~~~~~~~~~~~~N~~g~~nll~~~~~~-----~~k~i~~ss~~vyg~~~~~~~~~~~~~  141 (346)
T d1oc2a_          75 DAIVHYAAESHND--------NSLNDPSPFIHTNFIGTYTLLEAARKY-----DIRFHHVSTDEVYGDLPLREDLPGHGE  141 (346)
T ss_dssp             SEEEECCSCCCHH--------HHHHCCHHHHHHHTHHHHHHHHHHHHH-----TCEEEEEEEGGGGCCBCCGGGSTTTTC
T ss_pred             hhhhhhhhccccc--------chhhCcccceeeehHhHHhhhhhhccc-----cccccccccceEecccCcccccccccc
Confidence            8899998864321        122345677899999999888776443     246777777654321            


Q ss_pred             -----------CCCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcH
Q 021960          176 -----------GLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQ  244 (305)
Q Consensus       176 -----------~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (305)
                                 ....+.|+.+|.+.+.+++.+.+++   ++++..+.|+.+..|....  ..               ...
T Consensus       142 ~~~~~~~e~~~~~p~s~Y~~sK~~~E~~~~~~~~~~---~i~~~ilR~~~vyGp~~~~--~~---------------~~~  201 (346)
T d1oc2a_         142 GPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF---GVKATISNCSNNYGPYQHI--EK---------------FIP  201 (346)
T ss_dssp             STTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEESTTCCT--TS---------------HHH
T ss_pred             CcccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHc---CCCEEEEeecceeCCCCCc--cc---------------hhH
Confidence                       1123579999999999999888774   7999999999887753110  00               000


Q ss_pred             HHHHHHHHH----HhhcCCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCC
Q 021960          245 KEVRKMEEF----VSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGG  295 (305)
Q Consensus       245 ~~~~~~~~~----~~~~~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG  295 (305)
                      ..+.....-    .-.-+.....++..+|++++++.++....   .|..+++-+|
T Consensus       202 ~~i~~~~~~~~~~i~~~g~~~r~~i~v~D~a~a~~~~~~~~~---~~~~~~~~~~  253 (346)
T d1oc2a_         202 RQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAILTKGR---MGETYLIGAD  253 (346)
T ss_dssp             HHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHHHHHHHHCC---TTCEEEECCS
T ss_pred             HHHHHHHcCCceeEeCCCCccccccchhhHHHHHHHHHhhcc---cCcccccccc
Confidence            111111110    00112334456889999999988876542   3555554444

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=99.64  E-value=2e-15  Score=132.28  Aligned_cols=152  Identities=15%  Similarity=0.123  Sum_probs=118.2

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEE
Q 021960           31 GKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDIL  110 (305)
Q Consensus        31 ~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~l  110 (305)
                      .|.||||||+|.||++++++|+++|+.++++++..+                  +|+.|.+.++.+++.-     .+|.+
T Consensus         2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~~------------------~~~~~~~~~~~~~~~~-----~~d~v   58 (315)
T d1e6ua_           2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDE------------------LNLLDSRAVHDFFASE-----RIDQV   58 (315)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTTT------------------CCTTCHHHHHHHHHHH-----CCSEE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCchh------------------ccccCHHHHHHHHhhc-----CCCEE
Confidence            468999999999999999999999999887754321                  5899999988887643     69999


Q ss_pred             EEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCC--------------
Q 021960          111 YNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGG--------------  176 (305)
Q Consensus       111 i~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~--------------  176 (305)
                      +|+|+.....       ........+.+++|+.++.++++++..    .+-.++|++||.+.+.+.              
T Consensus        59 ~~~a~~~~~~-------~~~~~~~~~~~~~Nv~gt~~ll~~a~~----~~v~~~i~~SS~~vyg~~~~~~~~E~~~~~~~  127 (315)
T d1e6ua_          59 YLAAAKVGGI-------VANNTYPADFIYQNMMIESNIIHAAHQ----NDVNKLLFLGSSCIYPKLAKQPMAESELLQGT  127 (315)
T ss_dssp             EECCCCCCCH-------HHHHHCHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEECCGGGSCTTCCSSBCGGGTTSSC
T ss_pred             EEcchhcccc-------ccchhhHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEECCceEcCCCCCCCccCCccccCC
Confidence            9999765321       113344566788999999888877654    445689999998865321              


Q ss_pred             --CCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCcccccc
Q 021960          177 --LGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSM  219 (305)
Q Consensus       177 --~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~  219 (305)
                        +....|+.+|.+.+.+++.++++.   |+++..+.|+.+..|.
T Consensus       128 ~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ilR~~~vyGp~  169 (315)
T d1e6ua_         128 LEPTNEPYAIAKIAGIKLCESYNRQY---GRDYRSVMPTNLYGPH  169 (315)
T ss_dssp             CCGGGHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEESTT
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEeeccEECCC
Confidence              123469999999999999998874   7999999999988764

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=99.63  E-value=1.2e-14  Score=130.99  Aligned_cols=170  Identities=22%  Similarity=0.202  Sum_probs=122.3

Q ss_pred             CCEEEEecCCCchHHHHHHHHHH-cCCeEEEEecC----------cchhhh---Hhh------hcCCCCeEEEEecCCCH
Q 021960           31 GKVAIITGGARGIGEAAVRLFAR-HGAKVVIADVE----------DTLGSV---LAS------TLAPAPVTFVHCDVSLE   90 (305)
Q Consensus        31 ~k~vlVtGas~giG~~ia~~l~~-~g~~vv~~~r~----------~~~~~~---~~~------~~~~~~v~~~~~D~~d~   90 (305)
                      +..||||||+|.||++++++|++ .|++|+++++-          +.....   +..      ......+.++.+|++|.
T Consensus         2 ~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~   81 (383)
T d1gy8a_           2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (383)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCH
Confidence            45799999999999999999986 68999988631          111110   000      01234588999999999


Q ss_pred             HHHHHHHHHHHHhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEeccc
Q 021960           91 EDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASV  170 (305)
Q Consensus        91 ~~i~~~~~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~  170 (305)
                      +.++++++..    .++|+|||+|+.....        ...+.....+++|+.++..+++.+..    .+..+++++||.
T Consensus        82 ~~l~~~~~~~----~~~d~ViH~Aa~~~~~--------~~~~~~~~~~~~N~~~t~~~l~~~~~----~~~~~~~~~~s~  145 (383)
T d1gy8a_          82 DFLNGVFTRH----GPIDAVVHMCAFLAVG--------ESVRDPLKYYDNNVVGILRLLQAMLL----HKCDKIIFSSSA  145 (383)
T ss_dssp             HHHHHHHHHS----CCCCEEEECCCCCCHH--------HHHHCHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEEEEG
T ss_pred             HHhhhhhhcc----ceeehhhccccccccc--------ccccccccccccccccccccchhhhc----cCCccccccccc
Confidence            8888877643    5789999999965321        12344566788999998887777654    455677777765


Q ss_pred             ccccC------------------CCCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCcccccc
Q 021960          171 AGVMG------------------GLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSM  219 (305)
Q Consensus       171 ~~~~~------------------~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~  219 (305)
                      .....                  ......|+.+|.+.+.+++.+...+   |+.+.+++|+.+..+.
T Consensus       146 ~~~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---gl~~~~lR~~~vyG~~  209 (383)
T d1gy8a_         146 AIFGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY---GIKGICLRYFNACGAH  209 (383)
T ss_dssp             GGTBSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECCC
T ss_pred             ccccccccccccccccccccccCCCCCCHHHhhHhHHHHHHHHHHHHh---CCCEEEEecceeeccC
Confidence            54321                  1234679999999999999888764   7999999999887765

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.62  E-value=1.4e-14  Score=128.92  Aligned_cols=174  Identities=17%  Similarity=0.077  Sum_probs=129.3

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc-CCCCeEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 021960           29 LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL-APAPVTFVHCDVSLEEDIENLINSTVSRYGRL  107 (305)
Q Consensus        29 l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~-~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~i  107 (305)
                      ++||+||||||||.||+++++.|+++|+.|++++|+........+.. ....++++.+|++|.+++.++++..     .+
T Consensus         6 ~~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~~~~-----~~   80 (356)
T d1rkxa_           6 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREF-----QP   80 (356)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHH-----CC
T ss_pred             hCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhhcccCCeEEEeeccChHhhhhhhhhc-----hh
Confidence            47899999999999999999999999999999998765433322222 2346899999999999999887765     79


Q ss_pred             cEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccC------------
Q 021960          108 DILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMG------------  175 (305)
Q Consensus       108 d~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~------------  175 (305)
                      |+++|.|+....        ..+.+.....+++|+.++.++++++...   .....+++.||......            
T Consensus        81 ~~v~~~aa~~~~--------~~~~~~~~~~~~~Nv~g~~n~l~~~~~~---~~~~~~~~~s~~~~~~~~~~~~~~~~~~~  149 (356)
T d1rkxa_          81 EIVFHMAAQPLV--------RLSYSEPVETYSTNVMGTVYLLEAIRHV---GGVKAVVNITSDKCYDNKEWIWGYRENEA  149 (356)
T ss_dssp             SEEEECCSCCCH--------HHHHHCHHHHHHHHTHHHHHHHHHHHHH---CCCCEEEEECCGGGBCCCCSSSCBCTTSC
T ss_pred             hhhhhhhccccc--------cccccCCccccccccccchhhhhhhhcc---ccccccccccccccccccccccccccccc
Confidence            999999986432        1234566778899999998888777542   23345555554433321            


Q ss_pred             CCCCccchhhHHHHHHHHHHHHHHHC------cCCcEEEEEeCCccccc
Q 021960          176 GLGPHAYTASKHAIVGLTKNAACELG------RYGIRVNCISPFGVATS  218 (305)
Q Consensus       176 ~~~~~~Y~~sKaa~~~~~~~la~e~~------~~~i~v~~v~PG~v~T~  218 (305)
                      ..+...|+.+|.+.+.+++.++.++.      ..++.+..+.|+.+..+
T Consensus       150 ~~p~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp  198 (356)
T d1rkxa_         150 MGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGG  198 (356)
T ss_dssp             BCCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECT
T ss_pred             cCCCCccccccccchhhhhHHhhhcccchhccccCceEEeccCCCeeCC
Confidence            11345799999999999998887763      34688889999877654

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=7.1e-15  Score=123.62  Aligned_cols=157  Identities=15%  Similarity=0.104  Sum_probs=113.6

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCC--eEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcC
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGA--KVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYG  105 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~--~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g  105 (305)
                      .|++|+||||||||.||++++++|+++|.  +|++++|+........    ..++....+|+.+.+++.+.+       .
T Consensus        11 ~m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~----~~~i~~~~~D~~~~~~~~~~~-------~   79 (232)
T d2bkaa1          11 RMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA----YKNVNQEVVDFEKLDDYASAF-------Q   79 (232)
T ss_dssp             HHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG----GGGCEEEECCGGGGGGGGGGG-------S
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccc----cceeeeeeecccccccccccc-------c
Confidence            46789999999999999999999999996  7999988754432211    124677778887765554433       4


Q ss_pred             CccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhh
Q 021960          106 RLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTAS  185 (305)
Q Consensus       106 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  185 (305)
                      ..|++||++|...           ..........+|+.++..+.+.+..    .+-.++|++||......  ....|+.+
T Consensus        80 ~~d~vi~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~a~~----~~v~~fi~~Ss~~~~~~--~~~~Y~~~  142 (232)
T d2bkaa1          80 GHDVGFCCLGTTR-----------GKAGAEGFVRVDRDYVLKSAELAKA----GGCKHFNLLSSKGADKS--SNFLYLQV  142 (232)
T ss_dssp             SCSEEEECCCCCH-----------HHHHHHHHHHHHTHHHHHHHHHHHH----TTCCEEEEECCTTCCTT--CSSHHHHH
T ss_pred             ccccccccccccc-----------cccchhhhhhhcccccceeeecccc----cCccccccCCccccccC--ccchhHHH
Confidence            6899999998531           2244556678898888777776643    56678999999876543  34579999


Q ss_pred             HHHHHHHHHHHHHHHCcCCc-EEEEEeCCcccccc
Q 021960          186 KHAIVGLTKNAACELGRYGI-RVNCISPFGVATSM  219 (305)
Q Consensus       186 Kaa~~~~~~~la~e~~~~~i-~v~~v~PG~v~T~~  219 (305)
                      |...+..++.       .+. .+..+.||.+..+.
T Consensus       143 K~~~E~~l~~-------~~~~~~~IlRP~~i~G~~  170 (232)
T d2bkaa1         143 KGEVEAKVEE-------LKFDRYSVFRPGVLLCDR  170 (232)
T ss_dssp             HHHHHHHHHT-------TCCSEEEEEECCEEECTT
T ss_pred             HHHhhhcccc-------ccccceEEecCceeecCC
Confidence            9988765532       233 46778999997764

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.56  E-value=2.1e-14  Score=119.92  Aligned_cols=219  Identities=12%  Similarity=0.026  Sum_probs=133.8

Q ss_pred             CEEEEecCCCchHHHHHHHHHHcCCeE--EEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 021960           32 KVAIITGGARGIGEAAVRLFARHGAKV--VIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDI  109 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~g~~v--v~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~  109 (305)
                      ++||||||+|+||+++++.|+++|+.|  +.+.|+.......     ..+++++.+|+++.+++.++++       .+|.
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~-----~~~~~~~~~d~~~~~~~~~~~~-------~~d~   71 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI-----GGEADVFIGDITDADSINPAFQ-------GIDA   71 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHT-----TCCTTEEECCTTSHHHHHHHHT-------TCSE
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhc-----cCCcEEEEeeeccccccccccc-------ccee
Confidence            699999999999999999999999764  4455655432221     2357889999999998887764       6899


Q ss_pred             EEEcCCCCCCCCCCCcc-----cCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchh
Q 021960          110 LYNNAGVLGNQRKHKSI-----IDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTA  184 (305)
Q Consensus       110 li~nag~~~~~~~~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~  184 (305)
                      +||+++...........     .............+|+.++..++.....    ...+...+.|+.....+......+..
T Consensus        72 vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~s~~~~~~~~~~~~~~~~  147 (252)
T d2q46a1          72 LVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKV----AGVKHIVVVGSMGGTNPDHPLNKLGN  147 (252)
T ss_dssp             EEECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHH----HTCSEEEEEEETTTTCTTCGGGGGGG
T ss_pred             eEEEEeeccccccccchhhhhhcccccccchhhhccccccceeecccccc----ccccccccccccccCCCCcccccccc
Confidence            99999865432111100     0111223445567788887666555433    44567777777666554433333322


Q ss_pred             hH-HHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCC
Q 021960          185 SK-HAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGT  263 (305)
Q Consensus       185 sK-aa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (305)
                      .+ .........+..   ..++.+..++||.+..+........          ....              .........
T Consensus       148 ~~~~~~~~~~~~~~~---~~~~~~~ilRp~~v~g~~~~~~~~~----------~~~~--------------~~~~~~~~~  200 (252)
T d2q46a1         148 GNILVWKRKAEQYLA---DSGTPYTIIRAGGLLDKEGGVRELL----------VGKD--------------DELLQTDTK  200 (252)
T ss_dssp             CCHHHHHHHHHHHHH---HSSSCEEEEEECEEECSCTTSSCEE----------EEST--------------TGGGGSSCC
T ss_pred             cchhhhhhhhhhhhh---cccccceeecceEEECCCcchhhhh----------hccC--------------cccccCCCC
Confidence            22 222222223233   3689999999999877642111000          0000              000012234


Q ss_pred             CCCHHHHHHHHHHhccCCCCceeccEEEecCC
Q 021960          264 TLRSKDIAEAALYLASDESRYVSGHNLVVDGG  295 (305)
Q Consensus       264 ~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG  295 (305)
                      ++.++|+|++++.++..+.  ..|+++++-++
T Consensus       201 ~i~~~Dva~a~~~~l~~~~--~~g~~~~i~~~  230 (252)
T d2q46a1         201 TVPRADVAEVCIQALLFEE--AKNKAFDLGSK  230 (252)
T ss_dssp             EEEHHHHHHHHHHHTTCGG--GTTEEEEEEEC
T ss_pred             eEEHHHHHHHHHHHhCCcc--ccCcEEEEeeC
Confidence            6689999999999887643  46889988654

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.37  E-value=3.5e-13  Score=111.26  Aligned_cols=149  Identities=13%  Similarity=0.076  Sum_probs=100.0

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHcCC--eEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 021960           31 GKVAIITGGARGIGEAAVRLFARHGA--KVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLD  108 (305)
Q Consensus        31 ~k~vlVtGas~giG~~ia~~l~~~g~--~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id  108 (305)
                      .|++|||||||.||++++++|+++|+  .|+...|+....        ..+   +..+..|..++..      ...+.+|
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~--------~~~---~~~~~~d~~~~~~------~~~~~~d   64 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAE--------HPR---LDNPVGPLAELLP------QLDGSID   64 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCC--------CTT---EECCBSCHHHHGG------GCCSCCS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhh--------ccc---ccccccchhhhhh------ccccchh
Confidence            48999999999999999999999997  455555543211        111   3345555443322      2234689


Q ss_pred             EEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhhHHH
Q 021960          109 ILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHA  188 (305)
Q Consensus       109 ~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKaa  188 (305)
                      .+|+++|....          .....+...++|+.++..+.+.+.    +.+-.+++++||..+..  .....|..+|..
T Consensus        65 ~vi~~~g~~~~----------~~~~~~~~~~~~~~~~~~~~~~a~----~~~v~~~i~~Ss~~~~~--~~~~~y~~~K~~  128 (212)
T d2a35a1          65 TAFCCLGTTIK----------EAGSEEAFRAVDFDLPLAVGKRAL----EMGARHYLVVSALGADA--KSSIFYNRVKGE  128 (212)
T ss_dssp             EEEECCCCCHH----------HHSSHHHHHHHHTHHHHHHHHHHH----HTTCCEEEEECCTTCCT--TCSSHHHHHHHH
T ss_pred             eeeeeeeeecc----------ccccccccccchhhhhhhcccccc----ccccccccccccccccc--ccccchhHHHHH
Confidence            99999986421          011234567888888877777653    35667899999977653  345679999988


Q ss_pred             HHHHHHHHHHHHCcCCc-EEEEEeCCcccccc
Q 021960          189 IVGLTKNAACELGRYGI-RVNCISPFGVATSM  219 (305)
Q Consensus       189 ~~~~~~~la~e~~~~~i-~v~~v~PG~v~T~~  219 (305)
                      .+..++       ..+. +...++|+.+..+.
T Consensus       129 ~E~~l~-------~~~~~~~~I~Rp~~v~G~~  153 (212)
T d2a35a1         129 LEQALQ-------EQGWPQLTIARPSLLFGPR  153 (212)
T ss_dssp             HHHHHT-------TSCCSEEEEEECCSEESTT
T ss_pred             Hhhhcc-------ccccccceeeCCcceeCCc
Confidence            776543       2343 57788999997664

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.34  E-value=5.7e-12  Score=107.73  Aligned_cols=196  Identities=16%  Similarity=0.155  Sum_probs=125.2

Q ss_pred             CEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEEE
Q 021960           32 KVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILY  111 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~li  111 (305)
                      ..||||||||.||++++++|.++|++|+.++|++                   +|++|.++++++++..     ++|+||
T Consensus         2 MKIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~-------------------~D~~d~~~~~~~l~~~-----~~d~vi   57 (281)
T d1vl0a_           2 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQD-------------------LDITNVLAVNKFFNEK-----KPNVVI   57 (281)
T ss_dssp             EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT-------------------CCTTCHHHHHHHHHHH-----CCSEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEeechh-------------------ccCCCHHHHHHHHHHc-----CCCEEE
Confidence            3589999999999999999999999999998753                   4899999999888765     689999


Q ss_pred             EcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccC-----------CCCCc
Q 021960          112 NNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMG-----------GLGPH  180 (305)
Q Consensus       112 ~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~-----------~~~~~  180 (305)
                      |+|+....        +......+..++.|+.....+.......     ...+++.||...+..           .....
T Consensus        58 h~a~~~~~--------~~~~~~~~~~~~~n~~~~~~~~~~~~~~-----~~~~~~~ss~~v~~~~~~~~~~e~~~~~~~~  124 (281)
T d1vl0a_          58 NCAAHTAV--------DKCEEQYDLAYKINAIGPKNLAAAAYSV-----GAEIVQISTDYVFDGEAKEPITEFDEVNPQS  124 (281)
T ss_dssp             ECCCCCCH--------HHHHHCHHHHHHHHTHHHHHHHHHHHHH-----TCEEEEEEEGGGSCSCCSSCBCTTSCCCCCS
T ss_pred             eecccccc--------ccccccchhhcccccccccccccccccc-----cccccccccceeeeccccccccccccccchh
Confidence            99986432        1123445566777777766555544332     234555555433221           12345


Q ss_pred             cchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHH--HhhcC
Q 021960          181 AYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEF--VSGLG  258 (305)
Q Consensus       181 ~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~  258 (305)
                      .|+.+|...+.+++.       .+.....+.|+.+..+...-.                    ...+......  .....
T Consensus       125 ~~~~~k~~~e~~~~~-------~~~~~~i~R~~~vyG~~~~~~--------------------~~~~~~~~~~~~~~~~~  177 (281)
T d1vl0a_         125 AYGKTKLEGENFVKA-------LNPKYYIVRTAWLYGDGNNFV--------------------KTMINLGKTHDELKVVH  177 (281)
T ss_dssp             HHHHHHHHHHHHHHH-------HCSSEEEEEECSEESSSSCHH--------------------HHHHHHHHHCSEEEEES
T ss_pred             hhhhhhhHHHHHHHH-------hCCCccccceeEEeCCCcccc--------------------cchhhhhccCCceeecC
Confidence            788888887766532       256677899998866531100                    0111111110  01112


Q ss_pred             CCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCC
Q 021960          259 NLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGG  295 (305)
Q Consensus       259 ~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG  295 (305)
                      ...+.+...+|+++++.+++....   +| .+++-++
T Consensus       178 ~~~~~~i~v~D~~~~~~~~~~~~~---~g-~~~~~~~  210 (281)
T d1vl0a_         178 DQVGTPTSTVDLARVVLKVIDEKN---YG-TFHCTCK  210 (281)
T ss_dssp             SCEECCEEHHHHHHHHHHHHHHTC---CE-EEECCCB
T ss_pred             Cceeccchhhhhhhhhhhhhhhcc---cC-ceeEeCC
Confidence            333456789999999999987652   45 4444443

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.31  E-value=1.8e-11  Score=105.73  Aligned_cols=218  Identities=10%  Similarity=0.010  Sum_probs=122.0

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhh----HhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCC
Q 021960           31 GKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSV----LASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGR  106 (305)
Q Consensus        31 ~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~----~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~  106 (305)
                      .++||||||||.||++++++|+++|++|+++.|+......    .........+.++.+|+.|.+++.+.++       .
T Consensus         3 k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~-------~   75 (312)
T d1qyda_           3 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALK-------Q   75 (312)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHT-------T
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhcc-------C
Confidence            3469999999999999999999999999999886543211    1112234558899999999988877664       5


Q ss_pred             ccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCC-CCccchhh
Q 021960          107 LDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGL-GPHAYTAS  185 (305)
Q Consensus       107 id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~-~~~~Y~~s  185 (305)
                      .+.++++++.....                   .|..+...++..+    .+....++++.||........ ....|...
T Consensus        76 ~~~~~~~~~~~~~~-------------------~~~~~~~~~l~~a----~~~~~~~~v~~Ss~g~~~~~~~~~~~~~~~  132 (312)
T d1qyda_          76 VDVVISALAGGVLS-------------------HHILEQLKLVEAI----KEAGNIKRFLPSEFGMDPDIMEHALQPGSI  132 (312)
T ss_dssp             CSEEEECCCCSSSS-------------------TTTTTHHHHHHHH----HHSCCCSEEECSCCSSCTTSCCCCCSSTTH
T ss_pred             cchhhhhhhhcccc-------------------cchhhhhHHHHHH----HHhcCCcEEEEeeccccCCCcccccchhhh
Confidence            78888888753221                   1222222223332    234455677777654332211 11223333


Q ss_pred             HHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCC
Q 021960          186 KHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL  265 (305)
Q Consensus       186 Kaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (305)
                      +......+..+..+   .++....+.||.+..+..............  ........             ..+.....++
T Consensus       133 ~~~~~~~~~~~~~~---~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~--~~~~~~~~-------------~~g~~~~~~i  194 (312)
T d1qyda_         133 TFIDKRKVRRAIEA---ASIPYTYVSSNMFAGYFAGSLAQLDGHMMP--PRDKVLIY-------------GDGNVKGIWV  194 (312)
T ss_dssp             HHHHHHHHHHHHHH---TTCCBCEEECCEEHHHHTTTSSCTTCCSSC--CSSEECCB-------------TTSCSEEEEE
T ss_pred             hhHHHHHHHHhhcc---cccceEEeccceeecCCccchhhHHHHhhh--cccccccc-------------ccccccccee
Confidence            43333333333333   578888899998866542221111000000  00000000             0012334467


Q ss_pred             CHHHHHHHHHHhccCCCCceeccEEEecCCcc
Q 021960          266 RSKDIAEAALYLASDESRYVSGHNLVVDGGVT  297 (305)
Q Consensus       266 ~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~  297 (305)
                      .++|+|++++.++.+. ....+.++.+.++..
T Consensus       195 ~v~Dva~a~~~~l~~~-~~~~~~~~~~~~~~~  225 (312)
T d1qyda_         195 DEDDVGTYTIKSIDDP-QTLNKTMYIRPPMNI  225 (312)
T ss_dssp             CHHHHHHHHHHHTTCG-GGSSSEEECCCGGGE
T ss_pred             eHHHHHHHHHHHhcCc-cccCceEEEeCCCcC
Confidence            8999999999888654 223344455655543

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.29  E-value=2.9e-11  Score=103.74  Aligned_cols=213  Identities=14%  Similarity=0.110  Sum_probs=122.2

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhH-----hhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcC
Q 021960           31 GKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVL-----ASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYG  105 (305)
Q Consensus        31 ~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~-----~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g  105 (305)
                      .|+||||||||.||+++++.|+++|++|++++|+.......     ........+.++.+|+.+..+..+.++       
T Consensus         3 kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------   75 (307)
T d1qyca_           3 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVK-------   75 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHH-------
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhhhh-------
Confidence            47899999999999999999999999999998865442211     111224458889999999988777665       


Q ss_pred             CccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCCCCCccchhh
Q 021960          106 RLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTAS  185 (305)
Q Consensus       106 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  185 (305)
                      ..+.++|+++....                       .+...+.++..    ..+...+++.||............+...
T Consensus        76 ~~~~vi~~~~~~~~-----------------------~~~~~~~~a~~----~~~~~~~~~~s~~~~~~~~~~~~~~~~~  128 (307)
T d1qyca_          76 NVDVVISTVGSLQI-----------------------ESQVNIIKAIK----EVGTVKRFFPSEFGNDVDNVHAVEPAKS  128 (307)
T ss_dssp             TCSEEEECCCGGGS-----------------------GGGHHHHHHHH----HHCCCSEEECSCCSSCTTSCCCCTTHHH
T ss_pred             hceeeeeccccccc-----------------------chhhHHHHHHH----Hhccccceeeeccccccccccccccccc
Confidence            57889998875321                       11112222222    2344456776665444333333334444


Q ss_pred             HHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHHHHhhcCCCCCCCC
Q 021960          186 KHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTL  265 (305)
Q Consensus       186 Kaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (305)
                      +............+   .++....+.|+.+..+.............+.......                ........+.
T Consensus       129 ~~~~~~~~~~~~~~---~~~~~~i~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~i  189 (307)
T d1qyca_         129 VFEVKAKVRRAIEA---EGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVIL----------------GDGNARVVFV  189 (307)
T ss_dssp             HHHHHHHHHHHHHH---HTCCBEEEECCEEHHHHTTTTTCTTCSSCCSSEEEEE----------------TTSCCEEEEE
T ss_pred             cccccccccchhhc---cCCCceecccceecCCCccchhhhhhhhhhcccceee----------------ecccccccCC
Confidence            44333333333333   4677888999988766432221110000000000000                0012334467


Q ss_pred             CHHHHHHHHHHhccCCCCceeccEEEecCCcc
Q 021960          266 RSKDIAEAALYLASDESRYVSGHNLVVDGGVT  297 (305)
Q Consensus       266 ~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~  297 (305)
                      ..+|+|++++.++.... ...+..+++.++..
T Consensus       190 ~v~Dva~~~~~~l~~~~-~~~~~~~~~~~~~~  220 (307)
T d1qyca_         190 KEEDIGTFTIKAVDDPR-TLNKTLYLRLPANT  220 (307)
T ss_dssp             CHHHHHHHHHTTSSCGG-GTTEEEECCCGGGE
T ss_pred             cHHHHHHHHHHHhcChh-hcCceeEEeCCCCc
Confidence            89999999999987542 23333444444443

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=99.22  E-value=8.9e-11  Score=103.78  Aligned_cols=151  Identities=13%  Similarity=0.008  Sum_probs=96.5

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHH-HHHHHHHHHHhcCCcc
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEED-IENLINSTVSRYGRLD  108 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~-i~~~~~~~~~~~g~id  108 (305)
                      +.|+|+||||||.||+++++.|+++|++|+++.|+....... .......+..+.+|+.|..+ ++.++       ...|
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~-~~~~~~~v~~~~gD~~d~~~~~~~a~-------~~~~   73 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAE-ELQAIPNVTLFQGPLLNNVPLMDTLF-------EGAH   73 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHH-HHHTSTTEEEEESCCTTCHHHHHHHH-------TTCS
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhhh-hhcccCCCEEEEeeCCCcHHHHHHHh-------cCCc
Confidence            468999999999999999999999999999999876543321 11233458899999998544 33332       3578


Q ss_pred             EEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCC--CCCccchhhH
Q 021960          109 ILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGG--LGPHAYTASK  186 (305)
Q Consensus       109 ~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~--~~~~~Y~~sK  186 (305)
                      .++++......          .          ++....+++.++.    +.+..++++.||.......  .....|..+|
T Consensus        74 ~~~~~~~~~~~----------~----------~~~~~~~~~~aa~----~agv~~~v~~Ss~~~~~~~~~~~~~~~~~~k  129 (350)
T d1xgka_          74 LAFINTTSQAG----------D----------EIAIGKDLADAAK----RAGTIQHYIYSSMPDHSLYGPWPAVPMWAPK  129 (350)
T ss_dssp             EEEECCCSTTS----------C----------HHHHHHHHHHHHH----HHSCCSEEEEEECCCGGGTSSCCCCTTTHHH
T ss_pred             eEEeecccccc----------h----------hhhhhhHHHHHHH----HhCCCceEEEeeccccccCCcccchhhhhhH
Confidence            77776543211          1          1122223333332    3455567888886654432  2345677788


Q ss_pred             HHHHHHHHHHHHHHCcCCcEEEEEeCCcccccc
Q 021960          187 HAIVGLTKNAACELGRYGIRVNCISPFGVATSM  219 (305)
Q Consensus       187 aa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~  219 (305)
                      ...+.+.+       ..++....+.||.+..++
T Consensus       130 ~~~~~~~~-------~~~~~~~~vr~~~~~~~~  155 (350)
T d1xgka_         130 FTVENYVR-------QLGLPSTFVYAGIYNNNF  155 (350)
T ss_dssp             HHHHHHHH-------TSSSCEEEEEECEEGGGC
T ss_pred             HHHHHHHH-------hhccCceeeeeceeeccc
Confidence            76655433       235777888888876654

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.17  E-value=4.5e-11  Score=102.62  Aligned_cols=129  Identities=17%  Similarity=0.132  Sum_probs=90.8

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEEEE
Q 021960           33 VAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILYN  112 (305)
Q Consensus        33 ~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~li~  112 (305)
                      .||||||+|.||+++++.|.++|..| .+++....               +.+|++|.+.++++++..     ++|+|||
T Consensus         2 KILItG~tGfiG~~l~~~L~~~g~~v-~~~~~~~~---------------~~~Dl~~~~~~~~~i~~~-----~~D~Vih   60 (298)
T d1n2sa_           2 NILLFGKTGQVGWELQRSLAPVGNLI-ALDVHSKE---------------FCGDFSNPKGVAETVRKL-----RPDVIVN   60 (298)
T ss_dssp             EEEEECTTSHHHHHHHHHTTTTSEEE-EECTTCSS---------------SCCCTTCHHHHHHHHHHH-----CCSEEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEE-EEECCCcc---------------ccCcCCCHHHHHHHHHHc-----CCCEEEE
Confidence            58999999999999999999998644 44444321               236999999999888765     6999999


Q ss_pred             cCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccCC-----------CCCcc
Q 021960          113 NAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGG-----------LGPHA  181 (305)
Q Consensus       113 nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~-----------~~~~~  181 (305)
                      +||.....        .+.+.....+++|+.++..+..++.     +.+.+++++||.....+.           .....
T Consensus        61 ~Aa~~~~~--------~~~~~~~~~~~~n~~~~~~l~~~~~-----~~~~~~~~~ss~~~~~~~~~~~~~E~~~~~p~~~  127 (298)
T d1n2sa_          61 AAAHTAVD--------KAESEPELAQLLNATSVEAIAKAAN-----ETGAWVVHYSTDYVFPGTGDIPWQETDATSPLNV  127 (298)
T ss_dssp             CCCCCCHH--------HHTTCHHHHHHHHTHHHHHHHHHHT-----TTTCEEEEEEEGGGSCCCTTCCBCTTSCCCCSSH
T ss_pred             eccccccc--------ccccCccccccccccccccchhhhh-----ccccccccccccccccCCCCCCCccccccCCCch
Confidence            99965321        1123345667888888877766653     234677887776544221           13458


Q ss_pred             chhhHHHHHHHHHH
Q 021960          182 YTASKHAIVGLTKN  195 (305)
Q Consensus       182 Y~~sKaa~~~~~~~  195 (305)
                      |+.+|.+.+.+.+.
T Consensus       128 y~~~k~~~e~~~~~  141 (298)
T d1n2sa_         128 YGKTKLAGEKALQD  141 (298)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             HhhhhhhhhhhHHh
Confidence            99999988876644

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=99.08  E-value=1.2e-09  Score=93.65  Aligned_cols=221  Identities=15%  Similarity=0.168  Sum_probs=122.1

Q ss_pred             EEEecCCCchHHHHHHHHHHcCC-eEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHH--hcCCccEE
Q 021960           34 AIITGGARGIGEAAVRLFARHGA-KVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVS--RYGRLDIL  110 (305)
Q Consensus        34 vlVtGas~giG~~ia~~l~~~g~-~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~--~~g~id~l  110 (305)
                      ||||||+|.||++++++|+++|+ .|+++++-....... ....     ...+|..+.+.   +.+....  ....++++
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~~-~~~~-----~~~~~~~~~~~---~~~~~~~~~~~~~~~~i   72 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFV-NLVD-----LNIADYMDKED---FLIQIMAGEEFGDVEAI   72 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGH-HHHT-----SCCSEEEEHHH---HHHHHHTTCCCSSCCEE
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchhh-cccc-----cchhhhccchH---HHHHHhhhhcccchhhh
Confidence            79999999999999999999996 587776432221111 1111     11123333332   2223322  23467889


Q ss_pred             EEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccC-----------CCCC
Q 021960          111 YNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMG-----------GLGP  179 (305)
Q Consensus       111 i~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~-----------~~~~  179 (305)
                      +|.|+.....       ..+   .+...+.|+.+...+++.+..    .+. ++++.||.....+           ....
T Consensus        73 ~~~aa~~~~~-------~~~---~~~~~~~~~~~~~~~l~~~~~----~~i-~~v~~ss~~~~~~~~~~~~~~~~~~~~~  137 (307)
T d1eq2a_          73 FHEGACSSTT-------EWD---GKYMMDNNYQYSKELLHYCLE----REI-PFLYASSAATYGGRTSDFIESREYEKPL  137 (307)
T ss_dssp             EECCSCCCTT-------CCC---HHHHHHHTHHHHHHHHHHHHH----HTC-CEEEEEEGGGGTTCCSCBCSSGGGCCCS
T ss_pred             hhhccccccc-------ccc---ccccccccccccccccccccc----ccc-cccccccccccccccccccccccccccc
Confidence            9988754221       112   334556777777666665543    222 3555555544432           1245


Q ss_pred             ccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCccccccchhcccCCCCCchhhhhhccCCCcHHHHHHHHH-----HH
Q 021960          180 HAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEE-----FV  254 (305)
Q Consensus       180 ~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~  254 (305)
                      ..|+.+|.+.+.+++.++.+   .++.+..+.|..+..|........             ........+.+..     ..
T Consensus       138 ~~Y~~~K~~~e~~~~~~~~~---~~~~~~~~r~~~vyGp~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~  201 (307)
T d1eq2a_         138 NVYGYSKFLFDEYVRQILPE---ANSQIVGFRYFNVYGPREGHKGSM-------------ASVAFHLNTQLNNGESPKLF  201 (307)
T ss_dssp             SHHHHHHHHHHHHHHHHGGG---CSSCEEEEEECEEESSSCGGGGGG-------------SCHHHHHHHHHHC-------
T ss_pred             cccccccchhhhhccccccc---cccccccccceeEeeccccccccc-------------cccccccccccccccceeee
Confidence            68999999999999888766   467888888887766532110000             0000001111110     00


Q ss_pred             hhcCCCCCCCCCHHHHHHHHHHhccCCCCceeccEEEecCCccc
Q 021960          255 SGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTT  298 (305)
Q Consensus       255 ~~~~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~i~idgG~~~  298 (305)
                      ..-......+...+|++.++..++....    ...+++.+|...
T Consensus       202 ~g~~~~~r~~~~v~d~~~~~~~~~~~~~----~~~~~~~~~~~~  241 (307)
T d1eq2a_         202 EGSENFKRDFVYVGDVADVNLWFLENGV----SGIFNLGTGRAE  241 (307)
T ss_dssp             ------CBCEEEHHHHHHHHHHHHHHCC----CEEEEESCSCCB
T ss_pred             cCccceeeeeeecccHHHHHHHHhhhcc----ccccccccccch
Confidence            0112223456788999999988876542    345667666433

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.63  E-value=8.4e-13  Score=107.00  Aligned_cols=168  Identities=13%  Similarity=0.060  Sum_probs=88.2

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcC----CCCe------------EEEEecCCCHHHHHHH
Q 021960           33 VAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLA----PAPV------------TFVHCDVSLEEDIENL   96 (305)
Q Consensus        33 ~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~----~~~v------------~~~~~D~~d~~~i~~~   96 (305)
                      ++.|+||+|++|+++|+.|+++|++|++.+|+++..+.+.+.+.    ...+            ............+...
T Consensus         2 ki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (212)
T d1jaya_           2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASITGMKNEDAAEACDIAVLTIPWEHAIDTA   81 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHHSSCCEEEEEHHHHHHHCSEEEECSCHHHHHHHH
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEeeccccccchhhhhhhheeeeccchHH
Confidence            46788888999999999999999999999999877665554431    1111            1122222222222222


Q ss_pred             HHHHHHhcCCccEEEEc-CCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccC
Q 021960           97 INSTVSRYGRLDILYNN-AGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMG  175 (305)
Q Consensus        97 ~~~~~~~~g~id~li~n-ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~  175 (305)
                      .......  ........ .......   ...              +......+.+.....+........+++.|.....+
T Consensus        82 ~~~~~~~--~~~~~~~~~~~~~~~~---~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  142 (212)
T d1jaya_          82 RDLKNIL--REKIVVSPLVPVSRGA---KGF--------------TYSSERSAAEIVAEVLESEKVVSALHTIPAARFAN  142 (212)
T ss_dssp             HHTHHHH--TTSEEEECCCCEECCT---TCC--------------EECCSSCHHHHHHHHHTCSCEEECCTTCCHHHHHC
T ss_pred             HHhhhhh--cccccccccccccccc---ccc--------------cccccchhhhhhhhhhhhhcccccceeecHHHhcC
Confidence            1111111  11222211 1111000   000              00000111122233333333333333444444444


Q ss_pred             CCCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEeCCcccccc
Q 021960          176 GLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSM  219 (305)
Q Consensus       176 ~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~PG~v~T~~  219 (305)
                      ......|+.++++.....+..+.++..+.+.++.++||.+++..
T Consensus       143 ~~~~~~~~~~~a~~~~~a~~~~~~~~~~~~g~~~~~~G~l~~a~  186 (212)
T d1jaya_         143 LDEKFDWDVPVCGDDDESKKVVMSLISEIDGLRPLDAGPLSNSR  186 (212)
T ss_dssp             TTCCCCEEEEEEESCHHHHHHHHHHHHHSTTEEEEEEESGGGHH
T ss_pred             cccccCccceEEeCCHHHHHHHHHHHhhCCCeEEEEeChHHHHH
Confidence            44555677777777777777777776667888999999987653

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=97.95  E-value=6.8e-05  Score=58.10  Aligned_cols=82  Identities=22%  Similarity=0.195  Sum_probs=56.3

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcC-Ccc
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYG-RLD  108 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g-~id  108 (305)
                      .|.+|+|+| +|++|...+..+...|++|+++++++.+.+...+.. .. . .+..|-. .++.....+.+.+..| .+|
T Consensus        26 ~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~~g-a~-~-~~~~~~~-~~~~~~~~~~~~~~~g~g~D  100 (170)
T d1e3ja2          26 LGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCG-AD-V-TLVVDPA-KEEESSIIERIRSAIGDLPN  100 (170)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-CS-E-EEECCTT-TSCHHHHHHHHHHHSSSCCS
T ss_pred             CCCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHHHHcC-Cc-E-EEecccc-ccccchhhhhhhcccccCCc
Confidence            477999997 689999999888889999999999988877665432 22 2 2223322 2233444445555444 589


Q ss_pred             EEEEcCCC
Q 021960          109 ILYNNAGV  116 (305)
Q Consensus       109 ~li~nag~  116 (305)
                      ++|.++|.
T Consensus       101 ~vid~~g~  108 (170)
T d1e3ja2         101 VTIDCSGN  108 (170)
T ss_dssp             EEEECSCC
T ss_pred             eeeecCCC
Confidence            99999884

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.80  E-value=6.1e-05  Score=58.45  Aligned_cols=75  Identities=15%  Similarity=0.197  Sum_probs=56.2

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDI  109 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~  109 (305)
                      +.|.|+|.|| |.+|+.+|+.|+++|++|++.+|+....+.+.+...  .......+..+.......+.       ..|.
T Consensus         1 ~~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~~--~~~~~~~~~~~~~~~~~~i~-------~~~~   70 (182)
T d1e5qa1           1 ATKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQ--HSTPISLDVNDDAALDAEVA-------KHDL   70 (182)
T ss_dssp             CCCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTCT--TEEEEECCTTCHHHHHHHHT-------TSSE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhccc--ccccccccccchhhhHhhhh-------ccce
Confidence            3689999987 999999999999999999999999988877766543  24445566666666655543       4666


Q ss_pred             EEEcC
Q 021960          110 LYNNA  114 (305)
Q Consensus       110 li~na  114 (305)
                      ++...
T Consensus        71 ~i~~~   75 (182)
T d1e5qa1          71 VISLI   75 (182)
T ss_dssp             EEECS
T ss_pred             eEeec
Confidence            76543

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.77  E-value=1.6e-05  Score=62.38  Aligned_cols=105  Identities=18%  Similarity=0.196  Sum_probs=66.9

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDI  109 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~  109 (305)
                      .|.+|||+||+||+|...++.....|++|+.+.+++++.+.+.+. ... ..   .|-.+.  ..+..+.+  ..+.+|+
T Consensus        31 ~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~~l-Ga~-~v---i~~~~~--~~~~~~~~--~~~gvD~  101 (176)
T d1xa0a2          31 ERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVL-GAK-EV---LAREDV--MAERIRPL--DKQRWAA  101 (176)
T ss_dssp             GGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHT-TCS-EE---EECC-----------C--CSCCEEE
T ss_pred             CCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHHhc-ccc-ee---eecchh--HHHHHHHh--hccCcCE
Confidence            478999999999999999988888999999999888776665543 222 21   233221  11211111  1236999


Q ss_pred             EEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccccC
Q 021960          110 LYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMG  175 (305)
Q Consensus       110 li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~  175 (305)
                      ++.+.|..            +                  +...+..+  +.+|+++.++...+..+
T Consensus       102 vid~vgg~------------~------------------~~~~l~~l--~~~Griv~~G~~~g~~~  135 (176)
T d1xa0a2         102 AVDPVGGR------------T------------------LATVLSRM--RYGGAVAVSGLTGGAEV  135 (176)
T ss_dssp             EEECSTTT------------T------------------HHHHHHTE--EEEEEEEECSCCSSSCC
T ss_pred             EEEcCCch------------h------------------HHHHHHHh--CCCceEEEeecccCccc
Confidence            99998841            1                  11223334  55789999998776654

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=97.77  E-value=2e-05  Score=62.05  Aligned_cols=79  Identities=18%  Similarity=0.252  Sum_probs=54.8

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDI  109 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~  109 (305)
                      .|.+|||+||+|++|...+......|++|+.+.+++++.+.+.+.  +....   +|-.+.+..+.+.+..  ....+|+
T Consensus        29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~--Ga~~v---i~~~~~~~~~~~~~~~--~~~Gvd~  101 (182)
T d1v3va2          29 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQI--GFDAA---FNYKTVNSLEEALKKA--SPDGYDC  101 (182)
T ss_dssp             SSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT--TCSEE---EETTSCSCHHHHHHHH--CTTCEEE
T ss_pred             CCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHHHhh--hhhhh---cccccccHHHHHHHHh--hcCCCce
Confidence            589999999999999999999999999999999887766655443  22222   3444433333333222  1135999


Q ss_pred             EEEcCC
Q 021960          110 LYNNAG  115 (305)
Q Consensus       110 li~nag  115 (305)
                      ++.+.|
T Consensus       102 v~D~vG  107 (182)
T d1v3va2         102 YFDNVG  107 (182)
T ss_dssp             EEESSC
T ss_pred             eEEecC
Confidence            999887

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.73  E-value=3.7e-05  Score=60.01  Aligned_cols=79  Identities=14%  Similarity=0.177  Sum_probs=54.1

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDI  109 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~  109 (305)
                      .|++|||+||+|++|...+..+...|++|+.+.+++++.+.+.+ +....    .+|.++.+-.+++.+...  -..+|+
T Consensus        28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~~~-~Ga~~----vi~~~~~~~~~~i~~~t~--~~g~d~  100 (174)
T d1yb5a2          28 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQ-NGAHE----VFNHREVNYIDKIKKYVG--EKGIDI  100 (174)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-TTCSE----EEETTSTTHHHHHHHHHC--TTCEEE
T ss_pred             CCCEEEEEeccccccccccccccccCcccccccccccccccccc-cCccc----ccccccccHHHHhhhhhc--cCCceE
Confidence            57899999999999999999888899999998887766554443 33221    246666443333322221  124899


Q ss_pred             EEEcCC
Q 021960          110 LYNNAG  115 (305)
Q Consensus       110 li~nag  115 (305)
                      ++.+.|
T Consensus       101 v~d~~g  106 (174)
T d1yb5a2         101 IIEMLA  106 (174)
T ss_dssp             EEESCH
T ss_pred             Eeeccc
Confidence            998876

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=97.64  E-value=0.00014  Score=57.13  Aligned_cols=82  Identities=17%  Similarity=0.198  Sum_probs=60.4

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCC-eEEEEecCcchhhhHhhh---c-CCCCeEEEEecCCCHHHHHHHHHHHH
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGA-KVVIADVEDTLGSVLAST---L-APAPVTFVHCDVSLEEDIENLINSTV  101 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~-~vv~~~r~~~~~~~~~~~---~-~~~~v~~~~~D~~d~~~i~~~~~~~~  101 (305)
                      .++++|+|+|.|+ ||.|++++..|++.|. +++++.|+....+.....   . ..........|+.+.+++...+.   
T Consensus        14 ~~l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---   89 (182)
T d1vi2a1          14 FDIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALA---   89 (182)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHH---
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchhhhhc---
Confidence            3678999999997 7999999999999998 588888876654433221   1 12234456789999887776553   


Q ss_pred             HhcCCccEEEEcCCC
Q 021960          102 SRYGRLDILYNNAGV  116 (305)
Q Consensus       102 ~~~g~id~li~nag~  116 (305)
                          ..|++||+...
T Consensus        90 ----~~diiIN~Tp~  100 (182)
T d1vi2a1          90 ----SADILTNGTKV  100 (182)
T ss_dssp             ----TCSEEEECSST
T ss_pred             ----ccceeccccCC
Confidence                68999998653

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=97.62  E-value=4.5e-05  Score=59.66  Aligned_cols=78  Identities=14%  Similarity=0.141  Sum_probs=56.7

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhc--CCc
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRY--GRL  107 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~--g~i  107 (305)
                      .|++|||+||+|++|..++......|++|+.+++++.+.+.+.+. ...    ..+|.++.+-.++    +.+..  ..+
T Consensus        28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~~l-Ga~----~vi~~~~~d~~~~----v~~~t~g~g~   98 (179)
T d1qora2          28 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKA-GAW----QVINYREEDLVER----LKEITGGKKV   98 (179)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHH-TCS----EEEETTTSCHHHH----HHHHTTTCCE
T ss_pred             CCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHHhc-CCe----EEEECCCCCHHHH----HHHHhCCCCe
Confidence            478999999999999999999888999999999998877766543 222    2246666433333    33332  258


Q ss_pred             cEEEEcCCC
Q 021960          108 DILYNNAGV  116 (305)
Q Consensus       108 d~li~nag~  116 (305)
                      |+++.+.|.
T Consensus        99 d~v~d~~g~  107 (179)
T d1qora2          99 RVVYDSVGR  107 (179)
T ss_dssp             EEEEECSCG
T ss_pred             EEEEeCccH
Confidence            999988773

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.59  E-value=0.00018  Score=55.27  Aligned_cols=74  Identities=16%  Similarity=0.303  Sum_probs=54.6

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCC-eEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCC
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGA-KVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGR  106 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~-~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~  106 (305)
                      +++++.+||.|+ |++|..+++.|.++|+ ++.++.|+..+.+.+...+.   ..+  .++   +++.+.+.       .
T Consensus        21 ~l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~---~~~--~~~---~~~~~~l~-------~   84 (159)
T d1gpja2          21 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLG---GEA--VRF---DELVDHLA-------R   84 (159)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHT---CEE--CCG---GGHHHHHH-------T
T ss_pred             CcccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhh---ccc--ccc---hhHHHHhc-------c
Confidence            678999999998 9999999999999998 58889998777666665543   222  222   33333332       6


Q ss_pred             ccEEEEcCCCC
Q 021960          107 LDILYNNAGVL  117 (305)
Q Consensus       107 id~li~nag~~  117 (305)
                      .|+||++.+..
T Consensus        85 ~Divi~atss~   95 (159)
T d1gpja2          85 SDVVVSATAAP   95 (159)
T ss_dssp             CSEEEECCSSS
T ss_pred             CCEEEEecCCC
Confidence            89999988753

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.57  E-value=0.0013  Score=50.69  Aligned_cols=80  Identities=18%  Similarity=0.299  Sum_probs=55.3

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCC-eEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcC-Cc
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGA-KVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYG-RL  107 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~-~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g-~i  107 (305)
                      .|.+|+|.|+ |++|...+..+...|+ +|+++++++.+.+...+ +...  +++..+-.+.....+.++   ...+ .+
T Consensus        26 ~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~~-~Ga~--~~~~~~~~~~~~~~~~~~---~~~g~g~   98 (171)
T d1pl8a2          26 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKE-IGAD--LVLQISKESPQEIARKVE---GQLGCKP   98 (171)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH-TTCS--EEEECSSCCHHHHHHHHH---HHHTSCC
T ss_pred             CCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHHHH-hCCc--cccccccccccccccccc---ccCCCCc
Confidence            4679999986 9999999999989999 68999999888776543 3222  233333345444444333   3333 58


Q ss_pred             cEEEEcCCC
Q 021960          108 DILYNNAGV  116 (305)
Q Consensus       108 d~li~nag~  116 (305)
                      |++|.+.|.
T Consensus        99 Dvvid~~G~  107 (171)
T d1pl8a2          99 EVTIECTGA  107 (171)
T ss_dssp             SEEEECSCC
T ss_pred             eEEEeccCC
Confidence            999999884

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.56  E-value=6.7e-05  Score=58.80  Aligned_cols=77  Identities=19%  Similarity=0.260  Sum_probs=54.4

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhc--CCc
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRY--GRL  107 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~--g~i  107 (305)
                      .|++|||+||+|++|...+..+...|++|+++.+++++.+.+.+ . +.. +  .+|-.+.+    +.+++.+..  ..+
T Consensus        25 ~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~l~~-~-Ga~-~--vi~~~~~~----~~~~v~~~t~~~g~   95 (183)
T d1pqwa_          25 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSR-L-GVE-Y--VGDSRSVD----FADEILELTDGYGV   95 (183)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHT-T-CCS-E--EEETTCST----HHHHHHHHTTTCCE
T ss_pred             CCCEEEEECCCCCcccccchhhccccccceeeeccccccccccc-c-ccc-c--cccCCccC----HHHHHHHHhCCCCE
Confidence            47899999999999999999888899999998887766655543 2 222 2  23555532    333444432  259


Q ss_pred             cEEEEcCC
Q 021960          108 DILYNNAG  115 (305)
Q Consensus       108 d~li~nag  115 (305)
                      |+++.+.|
T Consensus        96 d~v~d~~g  103 (183)
T d1pqwa_          96 DVVLNSLA  103 (183)
T ss_dssp             EEEEECCC
T ss_pred             EEEEeccc
Confidence            99999887

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.42  E-value=0.00011  Score=49.11  Aligned_cols=43  Identities=26%  Similarity=0.435  Sum_probs=37.2

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHh
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLA   72 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~   72 (305)
                      +++++||+||+||+|...+..+...|++|+.+.++++..+.+.
T Consensus        31 ~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~~~   73 (77)
T d1o8ca2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLK   73 (77)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHH
T ss_pred             CCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHHHH
Confidence            5789999999999999999988889999999888877666554

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=97.35  E-value=0.00046  Score=53.86  Aligned_cols=80  Identities=15%  Similarity=0.179  Sum_probs=53.7

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCC-eEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcC--C
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGA-KVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYG--R  106 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~-~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g--~  106 (305)
                      .|.+|||+|+ |++|...+..+...|+ +|+++++++.+.+.+.+ +...  .+  +|..+. +..+..+++.+..+  .
T Consensus        28 ~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~~-lGa~--~v--i~~~~~-~~~~~~~~i~~~~~~~g  100 (182)
T d1vj0a2          28 AGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEE-IGAD--LT--LNRRET-SVEERRKAIMDITHGRG  100 (182)
T ss_dssp             BTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHH-TTCS--EE--EETTTS-CHHHHHHHHHHHTTTSC
T ss_pred             CCCEEEEECC-Cccchhheeccccccccccccccccccccccccc-ccce--EE--Eecccc-chHHHHHHHHHhhCCCC
Confidence            5899999997 8999999999889998 79999999888776544 3222  12  344332 12222233333322  4


Q ss_pred             ccEEEEcCCC
Q 021960          107 LDILYNNAGV  116 (305)
Q Consensus       107 id~li~nag~  116 (305)
                      +|++|.+.|.
T Consensus       101 ~Dvvid~vG~  110 (182)
T d1vj0a2         101 ADFILEATGD  110 (182)
T ss_dssp             EEEEEECSSC
T ss_pred             ceEEeecCCc
Confidence            8999999885

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.32  E-value=0.00031  Score=51.94  Aligned_cols=71  Identities=14%  Similarity=0.270  Sum_probs=55.3

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEEEE
Q 021960           33 VAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILYN  112 (305)
Q Consensus        33 ~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~li~  112 (305)
                      .|+|.|+ |.+|+.+++.|.++|+.|++++.++...+.+.+..   .+.++..|.+|.+.++++      .....|.++.
T Consensus         2 ~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~---~~~vi~Gd~~~~~~l~~~------~i~~a~~vv~   71 (132)
T d1lssa_           2 YIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEI---DALVINGDCTKIKTLEDA------GIEDADMYIA   71 (132)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC---SSEEEESCTTSHHHHHHT------TTTTCSEEEE
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhh---hhhhccCcccchhhhhhc------Chhhhhhhcc
Confidence            6889997 89999999999999999999999887776655443   367788999998766654      1125677776


Q ss_pred             c
Q 021960          113 N  113 (305)
Q Consensus       113 n  113 (305)
                      .
T Consensus        72 ~   72 (132)
T d1lssa_          72 V   72 (132)
T ss_dssp             C
T ss_pred             c
Confidence            4

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=97.29  E-value=0.00044  Score=54.41  Aligned_cols=83  Identities=16%  Similarity=0.167  Sum_probs=48.2

Q ss_pred             CCEEEE-ecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhh---hcCCCCeEEEEecCCCHHHHHHHHHHHHH-hcC
Q 021960           31 GKVAII-TGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLAS---TLAPAPVTFVHCDVSLEEDIENLINSTVS-RYG  105 (305)
Q Consensus        31 ~k~vlV-tGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~---~~~~~~v~~~~~D~~d~~~i~~~~~~~~~-~~g  105 (305)
                      |++++| +||+|++|...+......|++|+.+.++....+...+   .+... . ++.-|-.+..+....++++.+ ..+
T Consensus        29 g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~lGad-~-vi~~~~~~~~~~~~~v~~~~~~~g~  106 (189)
T d1gu7a2          29 GKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGAT-Q-VITEDQNNSREFGPTIKEWIKQSGG  106 (189)
T ss_dssp             TTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCS-E-EEEHHHHHCGGGHHHHHHHHHHHTC
T ss_pred             CCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhcccc-E-EEeccccchhHHHHHHHHHHhhccC
Confidence            555555 7999999999998888889999988776554433222   22222 1 222211111222233333333 334


Q ss_pred             CccEEEEcCC
Q 021960          106 RLDILYNNAG  115 (305)
Q Consensus       106 ~id~li~nag  115 (305)
                      .+|+++.+.|
T Consensus       107 ~vdvv~D~vg  116 (189)
T d1gu7a2         107 EAKLALNCVG  116 (189)
T ss_dssp             CEEEEEESSC
T ss_pred             CceEEEECCC
Confidence            6999998876

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.28  E-value=0.00027  Score=54.79  Aligned_cols=74  Identities=19%  Similarity=0.278  Sum_probs=51.4

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDI  109 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~  109 (305)
                      .|++|||+||+|++|...+..+...|++|+.+.+++.+.+...+ +... .   .+|..+.      .++... ...+|+
T Consensus        27 ~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~~-lGa~-~---~i~~~~~------~~~~~~-~~g~D~   94 (171)
T d1iz0a2          27 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLA-LGAE-E---AATYAEV------PERAKA-WGGLDL   94 (171)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHH-TTCS-E---EEEGGGH------HHHHHH-TTSEEE
T ss_pred             CCCEEEEEeccccchhhhhhhhcccccccccccccccccccccc-cccc-e---eeehhhh------hhhhhc-cccccc
Confidence            58899999999999999998888899999998888776665543 3222 1   1244332      122222 245999


Q ss_pred             EEEcCC
Q 021960          110 LYNNAG  115 (305)
Q Consensus       110 li~nag  115 (305)
                      ++.+.|
T Consensus        95 v~d~~G  100 (171)
T d1iz0a2          95 VLEVRG  100 (171)
T ss_dssp             EEECSC
T ss_pred             cccccc
Confidence            998765

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.23  E-value=0.00037  Score=54.79  Aligned_cols=78  Identities=17%  Similarity=0.262  Sum_probs=50.8

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHcCCeEEE-EecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 021960           31 GKVAIITGGARGIGEAAVRLFARHGAKVVI-ADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDI  109 (305)
Q Consensus        31 ~k~vlVtGas~giG~~ia~~l~~~g~~vv~-~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~  109 (305)
                      +++|||+||+||+|...++.....|+++++ +..+++....+...+...    ...|..+.+ ..+.++++..  ..+|+
T Consensus        31 ~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~gad----~vi~~~~~~-~~~~~~~~~~--~GvDv  103 (187)
T d1vj1a2          31 NQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFD----AAVNYKTGN-VAEQLREACP--GGVDV  103 (187)
T ss_dssp             CCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCCS----EEEETTSSC-HHHHHHHHCT--TCEEE
T ss_pred             CCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccce----EEeeccchh-HHHHHHHHhc--cCceE
Confidence            489999999999999999888788987554 555655555454444333    334665432 2333333322  24999


Q ss_pred             EEEcCC
Q 021960          110 LYNNAG  115 (305)
Q Consensus       110 li~nag  115 (305)
                      ++-+.|
T Consensus       104 v~D~vG  109 (187)
T d1vj1a2         104 YFDNVG  109 (187)
T ss_dssp             EEESSC
T ss_pred             EEecCC
Confidence            999887

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=97.13  E-value=0.00049  Score=53.01  Aligned_cols=80  Identities=14%  Similarity=0.228  Sum_probs=54.2

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCC-eEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGA-KVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLD  108 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~-~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id  108 (305)
                      .+.+++|+|++|++|...+..+...|. +|+++++++++.+...+. ...  +.  .|.++.+..++..+...  -+.+|
T Consensus        27 ~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~~-Ga~--~~--i~~~~~~~~~~~~~~~~--~~~~d   99 (170)
T d1jvba2          27 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRA-GAD--YV--INASMQDPLAEIRRITE--SKGVD   99 (170)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHH-TCS--EE--EETTTSCHHHHHHHHTT--TSCEE
T ss_pred             CCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHHHc-CCc--ee--eccCCcCHHHHHHHHhh--cccch
Confidence            478999999999999999999988885 788888888776665543 222  22  34454433333332221  13489


Q ss_pred             EEEEcCCC
Q 021960          109 ILYNNAGV  116 (305)
Q Consensus       109 ~li~nag~  116 (305)
                      ++|.++|.
T Consensus       100 ~vid~~g~  107 (170)
T d1jvba2         100 AVIDLNNS  107 (170)
T ss_dssp             EEEESCCC
T ss_pred             hhhccccc
Confidence            99999874

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.07  E-value=0.00063  Score=52.55  Aligned_cols=74  Identities=14%  Similarity=0.140  Sum_probs=53.0

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCC-CCeEEEEecCCCHHHHHHHHHHHHHhcCC
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAP-APVTFVHCDVSLEEDIENLINSTVSRYGR  106 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~i~~~~~~~~~~~g~  106 (305)
                      .++||.|||.|+ ||.+++++..|.+.|.++.++.|+.++.+.+.+.... ..+..  .+..+.            ....
T Consensus        15 ~~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~~~~~--~~~~~~------------~~~~   79 (170)
T d1nyta1          15 IRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQA--LSMDEL------------EGHE   79 (170)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEE--CCSGGG------------TTCC
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhcccccc--cccccc------------cccc
Confidence            567999999996 8999999999999999999999998877766655422 22333  222211            1136


Q ss_pred             ccEEEEcCCC
Q 021960          107 LDILYNNAGV  116 (305)
Q Consensus       107 id~li~nag~  116 (305)
                      .|++||+...
T Consensus        80 ~dliIN~Tp~   89 (170)
T d1nyta1          80 FDLIINATSS   89 (170)
T ss_dssp             CSEEEECCSC
T ss_pred             cceeeccccc
Confidence            8999987643

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=97.07  E-value=0.0008  Score=54.41  Aligned_cols=80  Identities=26%  Similarity=0.279  Sum_probs=54.6

Q ss_pred             CCCCCCEEEEecC----------------CCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCH
Q 021960           27 RRLEGKVAIITGG----------------ARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLE   90 (305)
Q Consensus        27 ~~l~~k~vlVtGa----------------s~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~   90 (305)
                      .+|+|+.||||+|                ||..|.++|+.+..+|++|.++.......       ....+..+  .+...
T Consensus         2 ~dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~~-------~p~~~~~~--~~~t~   72 (223)
T d1u7za_           2 NDLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLP-------TPPFVKRV--DVMTA   72 (223)
T ss_dssp             CTTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCCC-------CCTTEEEE--ECCSH
T ss_pred             cccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhcccccC-------cccccccc--eehhh
Confidence            3788999999876                57899999999999999998875433211       12234444  34444


Q ss_pred             HHHHHHHHHHHHhcCCccEEEEcCCCCC
Q 021960           91 EDIENLINSTVSRYGRLDILYNNAGVLG  118 (305)
Q Consensus        91 ~~i~~~~~~~~~~~g~id~li~nag~~~  118 (305)
                      ++...   .+.+.....|++|++|+...
T Consensus        73 ~~m~~---~~~~~~~~~D~~i~aAAvsD   97 (223)
T d1u7za_          73 LEMEA---AVNASVQQQNIFIGCAAVAD   97 (223)
T ss_dssp             HHHHH---HHHHHGGGCSEEEECCBCCS
T ss_pred             HHHHH---HHHhhhccceeEeeeechhh
Confidence            44444   44444456899999998754

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=97.02  E-value=0.00039  Score=51.33  Aligned_cols=73  Identities=19%  Similarity=0.257  Sum_probs=53.6

Q ss_pred             CEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEEE
Q 021960           32 KVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILY  111 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~li  111 (305)
                      |.++|.|. |.+|+.+++.|.++|+.|++++.+++..+.+...    ....+.+|.++.+.+.++      ...+.|.+|
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~~~----~~~~~~gd~~~~~~l~~a------~i~~a~~vi   69 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYASY----ATHAVIANATEENELLSL------GIRNFEYVI   69 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHTTTT----CSEEEECCTTCTTHHHHH------TGGGCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHHHHh----CCcceeeecccchhhhcc------CCccccEEE
Confidence            45778876 7999999999999999999999987776655432    245677999997666543      112467777


Q ss_pred             EcCC
Q 021960          112 NNAG  115 (305)
Q Consensus       112 ~nag  115 (305)
                      ...+
T Consensus        70 ~~~~   73 (134)
T d2hmva1          70 VAIG   73 (134)
T ss_dssp             ECCC
T ss_pred             EEcC
Confidence            6544

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=97.01  E-value=0.002  Score=44.26  Aligned_cols=74  Identities=20%  Similarity=0.248  Sum_probs=50.1

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRL  107 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~i  107 (305)
                      +++||+++|.|. |.-|.++|+.|+++|++|.+.+.+......  +.+.. .+.+...+. +.+.    ++       .+
T Consensus         2 ~~~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~~~~~--~~~~~-~~~~~~~~~-~~~~----~~-------~~   65 (93)
T d2jfga1           2 DYQGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMTPPGL--DKLPE-AVERHTGSL-NDEW----LM-------AA   65 (93)
T ss_dssp             CCTTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSSCTTG--GGSCT-TSCEEESBC-CHHH----HH-------HC
T ss_pred             CcCCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcCchhH--HHHhh-ccceeeccc-chhh----hc-------cC
Confidence            578999999997 678999999999999999999876543221  11111 233333333 2221    11       47


Q ss_pred             cEEEEcCCCC
Q 021960          108 DILYNNAGVL  117 (305)
Q Consensus       108 d~li~nag~~  117 (305)
                      |.+|...|+.
T Consensus        66 d~vi~SPGi~   75 (93)
T d2jfga1          66 DLIVASPGIA   75 (93)
T ss_dssp             SEEEECTTSC
T ss_pred             CEEEECCCCC
Confidence            9999999974

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=96.99  E-value=0.0033  Score=46.96  Aligned_cols=116  Identities=15%  Similarity=0.186  Sum_probs=65.5

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCC--eEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEE
Q 021960           33 VAIITGGARGIGEAAVRLFARHGA--KVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDIL  110 (305)
Q Consensus        33 ~vlVtGas~giG~~ia~~l~~~g~--~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~l  110 (305)
                      ++.|+||+|.+|.++|..|+.+|.  .+++.+.++...+.. +......+.....-+. ..+..+.+       ..-|++
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a~-Dl~~~~~~~~~~~~~~-~~~~~~~~-------~~aDiv   72 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAA-DLSHIETRATVKGYLG-PEQLPDCL-------KGCDVV   72 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHH-HHTTSSSSCEEEEEES-GGGHHHHH-------TTCSEE
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhhH-HHhhhhhhcCCCeEEc-CCChHHHh-------CCCCEE
Confidence            578999999999999999999886  488888876543332 2221111111111121 22222222       268999


Q ss_pred             EEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC-CCCEEEEecccc
Q 021960          111 YNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINR-GGGCIISTASVA  171 (305)
Q Consensus       111 i~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~isS~~  171 (305)
                      |..||.....       ..+.   .+.++.|....    +.+.+.+.+. ..+.++++|-..
T Consensus        73 Vitag~~~~~-------g~sR---~~ll~~N~~i~----~~i~~~i~~~~p~~iiivvtNPv  120 (144)
T d1mlda1          73 VIPAGVPRKP-------GMTR---DDLFNTNATIV----ATLTAACAQHCPDAMICIISNPV  120 (144)
T ss_dssp             EECCSCCCCT-------TCCG---GGGHHHHHHHH----HHHHHHHHHHCTTSEEEECSSCH
T ss_pred             EECCCcCCCC-------CCCc---chHHHHHHHHH----HHHHHHHHhcCCCeEEEEecCch
Confidence            9999964221       1122   23456666554    4444444433 456777776543

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=96.88  E-value=0.0018  Score=49.70  Aligned_cols=74  Identities=18%  Similarity=0.283  Sum_probs=52.9

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDI  109 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~  109 (305)
                      .|.+|+|.|+ |++|...+..+...|++++++++++++.+... .+...    ..+|..+.+....       ..+.+|+
T Consensus        30 ~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~~a~-~lGad----~~i~~~~~~~~~~-------~~~~~D~   96 (168)
T d1uufa2          30 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAK-ALGAD----EVVNSRNADEMAA-------HLKSFDF   96 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-HHTCS----EEEETTCHHHHHT-------TTTCEEE
T ss_pred             CCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHHHHHh-ccCCc----EEEECchhhHHHH-------hcCCCce
Confidence            4789999986 89999998888889999999988877665443 33333    2246666543322       2246999


Q ss_pred             EEEcCCC
Q 021960          110 LYNNAGV  116 (305)
Q Consensus       110 li~nag~  116 (305)
                      +|.+.|.
T Consensus        97 vid~~g~  103 (168)
T d1uufa2          97 ILNTVAA  103 (168)
T ss_dssp             EEECCSS
T ss_pred             eeeeeec
Confidence            9999885

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.88  E-value=0.012  Score=43.74  Aligned_cols=33  Identities=24%  Similarity=0.361  Sum_probs=29.4

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCC--eEEEEecCc
Q 021960           33 VAIITGGARGIGEAAVRLFARHGA--KVVIADVED   65 (305)
Q Consensus        33 ~vlVtGas~giG~~ia~~l~~~g~--~vv~~~r~~   65 (305)
                      ++.|+||+|.+|.++|..|+.++.  +++++++++
T Consensus         2 KV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~   36 (145)
T d1hyea1           2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREH   36 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGG
T ss_pred             EEEEECCCChHHHHHHHHHHhCCcccccccccchh
Confidence            588999999999999999999884  789998875

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=96.84  E-value=0.00068  Score=52.62  Aligned_cols=77  Identities=9%  Similarity=0.032  Sum_probs=52.6

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCC-eEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcC--C
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGA-KVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYG--R  106 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~-~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g--~  106 (305)
                      .|.+|+|.|+ |++|...+..+...|+ +|+++++++++.+...+ +...    ..+|..+.+..+    ++.+..+  .
T Consensus        27 ~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~~-lGa~----~~i~~~~~~~~~----~v~~~t~g~G   96 (174)
T d1jqba2          27 MGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKF-YGAT----DILNYKNGHIED----QVMKLTNGKG   96 (174)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHHH-HTCS----EEECGGGSCHHH----HHHHHTTTSC
T ss_pred             CCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHHHh-hCcc----ccccccchhHHH----HHHHHhhccC
Confidence            4779999986 8999999988888898 68889998877666544 3222    224555433233    3333322  3


Q ss_pred             ccEEEEcCCC
Q 021960          107 LDILYNNAGV  116 (305)
Q Consensus       107 id~li~nag~  116 (305)
                      +|++|.++|.
T Consensus        97 ~D~vid~~g~  106 (174)
T d1jqba2          97 VDRVIMAGGG  106 (174)
T ss_dssp             EEEEEECSSC
T ss_pred             cceEEEccCC
Confidence            9999999985

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=96.81  E-value=0.0025  Score=49.15  Aligned_cols=75  Identities=16%  Similarity=0.203  Sum_probs=54.9

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCC-CCeEEEEecCCCHHHHHHHHHHHHHhcC
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAP-APVTFVHCDVSLEEDIENLINSTVSRYG  105 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~-~~v~~~~~D~~d~~~i~~~~~~~~~~~g  105 (305)
                      ..+++|.++|.|+ ||.+++++..|.+.+.+|.++.|+.++.+.+.+.... ..+.....|-.              ...
T Consensus        14 ~~~~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~~~~--------------~~~   78 (171)
T d1p77a1          14 WLRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSMDSI--------------PLQ   78 (171)
T ss_dssp             CCCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGC--------------CCS
T ss_pred             CCCCCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhccccchhhhccc--------------ccc
Confidence            3568999999986 7889999999999888999999998877776655432 23444443311              124


Q ss_pred             CccEEEEcCCC
Q 021960          106 RLDILYNNAGV  116 (305)
Q Consensus       106 ~id~li~nag~  116 (305)
                      ..|++||+...
T Consensus        79 ~~diiIN~tp~   89 (171)
T d1p77a1          79 TYDLVINATSA   89 (171)
T ss_dssp             CCSEEEECCCC
T ss_pred             ccceeeecccc
Confidence            68999998754

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=96.80  E-value=0.0013  Score=50.74  Aligned_cols=79  Identities=14%  Similarity=0.254  Sum_probs=52.4

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCC-eEEEEecCcchhhhHhhhcCCCCeEEEEecCCC-HHHHHHHHHHHHHhcCCc
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGA-KVVIADVEDTLGSVLASTLAPAPVTFVHCDVSL-EEDIENLINSTVSRYGRL  107 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~-~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d-~~~i~~~~~~~~~~~g~i  107 (305)
                      .|.+|+|.|+ ||+|...+..++..|+ +|+++++++++.+...+. ... ..   .|..+ .+.+.+..+....  +.+
T Consensus        28 ~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~~-Ga~-~~---i~~~~~~~~~~~~~~~~~~--~G~   99 (176)
T d2jhfa2          28 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEV-GAT-EC---VNPQDYKKPIQEVLTEMSN--GGV   99 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHT-TCS-EE---ECGGGCSSCHHHHHHHHTT--SCB
T ss_pred             CCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHHh-CCe-eE---EecCCchhHHHHHHHHHhc--CCC
Confidence            5789999998 7899999999999986 788888888876655433 222 11   22222 2233443333322  369


Q ss_pred             cEEEEcCCC
Q 021960          108 DILYNNAGV  116 (305)
Q Consensus       108 d~li~nag~  116 (305)
                      |++|-+.|.
T Consensus       100 D~vid~~G~  108 (176)
T d2jhfa2         100 DFSFEVIGR  108 (176)
T ss_dssp             SEEEECSCC
T ss_pred             CEEEecCCc
Confidence            999999885

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=96.80  E-value=0.013  Score=45.10  Aligned_cols=114  Identities=9%  Similarity=0.006  Sum_probs=61.1

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCC-------eEEEEecCcchh--hhHhhhc---CCCCeEEEEecCCCHHHHHHHH
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGA-------KVVIADVEDTLG--SVLASTL---APAPVTFVHCDVSLEEDIENLI   97 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~-------~vv~~~r~~~~~--~~~~~~~---~~~~v~~~~~D~~d~~~i~~~~   97 (305)
                      +.-.|.||||+|.||.+++..|+....       .+.+++......  +...-.+   .......+..- ++.   .   
T Consensus        23 ~~~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~~~~~~~~-~~~---~---   95 (175)
T d7mdha1          23 KLVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIG-IDP---Y---   95 (175)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEE-SCH---H---
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccccccccCcccc-ccc---h---
Confidence            345799999999999999999997432       355566554322  1111111   11122222221 221   1   


Q ss_pred             HHHHHhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC-C-CCEEEEec
Q 021960           98 NSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINR-G-GGCIISTA  168 (305)
Q Consensus        98 ~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~-~~~iv~is  168 (305)
                          +.+...|++|..+|....       ...+.++   .+..|..-    ++.+.+.+.+. + ...|+++|
T Consensus        96 ----~~~~~aDvVvi~ag~~rk-------pg~tR~D---ll~~N~~I----~k~~~~~i~~~a~~~~~vlvv~  150 (175)
T d7mdha1          96 ----EVFEDVDWALLIGAKPRG-------PGMERAA---LLDINGQI----FADQGKALNAVASKNVKVLVVG  150 (175)
T ss_dssp             ----HHTTTCSEEEECCCCCCC-------TTCCHHH---HHHHHHHH----HHHHHHHHHHHSCTTCEEEECS
T ss_pred             ----hhccCCceEEEeeccCCC-------CCCcHHH---HHHHHHHH----HHHHHHHHHhhCCCCcEEEEec
Confidence                122368999999987422       1234444   44555533    45555555543 3 35565654

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=96.79  E-value=0.00063  Score=52.48  Aligned_cols=45  Identities=24%  Similarity=0.402  Sum_probs=37.9

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhh
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLAST   74 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~   74 (305)
                      .+++|||+||+||+|...++.....|++|+.+.+++++.+.+.+.
T Consensus        23 ~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~~~l   67 (167)
T d1tt7a2          23 EKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQL   67 (167)
T ss_dssp             GGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHHH
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHHHhh
Confidence            466899999999999999988778899999999988776666543

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.78  E-value=0.0017  Score=50.30  Aligned_cols=79  Identities=11%  Similarity=0.156  Sum_probs=53.0

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCC-eEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHH-HHHHHHHHHHhcCCc
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGA-KVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEED-IENLINSTVSRYGRL  107 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~-~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~-i~~~~~~~~~~~g~i  107 (305)
                      .|.+|+|+|+ ||+|...+..+...|+ +|+.+++++++.+...+.- .. ..   +|..+.+. .+.+.+.. . ...+
T Consensus        29 ~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~~G-A~-~~---in~~~~~~~~~~~~~~~-~-g~G~  100 (176)
T d1d1ta2          29 PGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVG-AT-EC---ISPKDSTKPISEVLSEM-T-GNNV  100 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHHT-CS-EE---ECGGGCSSCHHHHHHHH-H-TSCC
T ss_pred             CCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHHHHhcC-Cc-EE---ECccccchHHHHHHHHh-c-cccc
Confidence            5889999986 8999999999999995 7999999988877655442 22 21   23333222 22222222 1 2359


Q ss_pred             cEEEEcCCC
Q 021960          108 DILYNNAGV  116 (305)
Q Consensus       108 d~li~nag~  116 (305)
                      |++|.+.|.
T Consensus       101 d~vi~~~g~  109 (176)
T d1d1ta2         101 GYTFEVIGH  109 (176)
T ss_dssp             CEEEECSCC
T ss_pred             eEEEEeCCc
Confidence            999998884

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=96.77  E-value=0.009  Score=44.59  Aligned_cols=110  Identities=17%  Similarity=0.231  Sum_probs=60.5

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcC--CeEEEEecCcchhhhHhhhc-----CCCCeEEEEecCCCHHHHHHHHHHHHH
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHG--AKVVIADVEDTLGSVLASTL-----APAPVTFVHCDVSLEEDIENLINSTVS  102 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g--~~vv~~~r~~~~~~~~~~~~-----~~~~v~~~~~D~~d~~~i~~~~~~~~~  102 (305)
                      +++++.|.|+ |.+|..+|..|+.+|  ..++++++++.........+     ..........|.   ++          
T Consensus         4 ~~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~---~~----------   69 (146)
T d1ez4a1           4 NHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEY---SD----------   69 (146)
T ss_dssp             TBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCG---GG----------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccH---HH----------
Confidence            3568888896 999999999999988  47999998875432211111     112233333332   11          


Q ss_pred             hcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC-CCCEEEEec
Q 021960          103 RYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINR-GGGCIISTA  168 (305)
Q Consensus       103 ~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~is  168 (305)
                       ...-|++|.+||....          ...+-.+.+..|..-    ++.+.+.+.+. ..+.++++|
T Consensus        70 -~~~adivvitag~~~~----------~g~~r~~l~~~N~~i----~~~~~~~i~~~~p~aivivvt  121 (146)
T d1ez4a1          70 -CKDADLVVITAGAPQK----------PGESRLDLVNKNLNI----LSSIVKPVVDSGFDGIFLVAA  121 (146)
T ss_dssp             -GTTCSEEEECCCC--------------------CHHHHHHH----HHHHHHHHHHTTCCSEEEECS
T ss_pred             -hccccEEEEecccccC----------CCCCHHHHHHHHHHH----HHHHHHHHhhcCCCcEEEEeC
Confidence             2357999999986422          112233344555533    44444444444 445555655

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=96.72  E-value=0.00088  Score=52.14  Aligned_cols=44  Identities=27%  Similarity=0.442  Sum_probs=37.3

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhh
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLAS   73 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~   73 (305)
                      .++++||+||+||+|...++.....|++|+.+.+++++.+.+.+
T Consensus        31 ~~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~~~   74 (177)
T d1o89a2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLKS   74 (177)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHH
T ss_pred             CCCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHHHh
Confidence            35689999999999999998888899999999888877665543

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=96.69  E-value=0.0021  Score=49.55  Aligned_cols=78  Identities=13%  Similarity=0.204  Sum_probs=50.7

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEE-EEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVV-IADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLD  108 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv-~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id  108 (305)
                      .|.+|+|.|+ |++|...+..+...|+.++ ++++++.+.+..++ +...  ++  +|..+.+. .+.++++.  .+.+|
T Consensus        28 ~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~~-~Ga~--~~--i~~~~~~~-~~~i~~~t--~gg~D   98 (174)
T d1f8fa2          28 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAKQ-LGAT--HV--INSKTQDP-VAAIKEIT--DGGVN   98 (174)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHH-HTCS--EE--EETTTSCH-HHHHHHHT--TSCEE
T ss_pred             CCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHHHH-cCCe--EE--EeCCCcCH-HHHHHHHc--CCCCc
Confidence            4789999997 8999999988888898654 55777766665544 3222  22  35555322 22222221  24699


Q ss_pred             EEEEcCCC
Q 021960          109 ILYNNAGV  116 (305)
Q Consensus       109 ~li~nag~  116 (305)
                      ++|.+.|.
T Consensus        99 ~vid~~G~  106 (174)
T d1f8fa2          99 FALESTGS  106 (174)
T ss_dssp             EEEECSCC
T ss_pred             EEEEcCCc
Confidence            99999884

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=96.67  E-value=0.016  Score=43.04  Aligned_cols=114  Identities=19%  Similarity=0.251  Sum_probs=62.4

Q ss_pred             EEEEecCCCchHHHHHHHHHHc-C--CeEEEEecCcchhhhHhhhcC-CCCe-EEEEecCCCHHHHHHHHHHHHHhcCCc
Q 021960           33 VAIITGGARGIGEAAVRLFARH-G--AKVVIADVEDTLGSVLASTLA-PAPV-TFVHCDVSLEEDIENLINSTVSRYGRL  107 (305)
Q Consensus        33 ~vlVtGas~giG~~ia~~l~~~-g--~~vv~~~r~~~~~~~~~~~~~-~~~v-~~~~~D~~d~~~i~~~~~~~~~~~g~i  107 (305)
                      ++.|+|++|.+|.+++..|+.+ +  ..+++.+..+.......+... .... ......-.+.+.++           .-
T Consensus         2 KV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~~~~g~a~Dl~h~~~~~~~~~~~~~~~~~~~~-----------~a   70 (145)
T d2cmda1           2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDATPALE-----------GA   70 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSSTTHHHHHHHHHTSCSSCEEEEECSSCCHHHHT-----------TC
T ss_pred             EEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccccchhHHHHHHCCccccCCcEEEcCCCccccC-----------CC
Confidence            5789999999999999988643 4  578999876543222222111 1111 11122233433222           57


Q ss_pred             cEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHc-CCCCEEEEecccc
Q 021960          108 DILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMIN-RGGGCIISTASVA  171 (305)
Q Consensus       108 d~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~~iv~isS~~  171 (305)
                      |++|..||.....       ..+.   .+.+..|..-.    +.+.+.+.+ .+.+.++++|...
T Consensus        71 DvvvitaG~~~k~-------g~~R---~dl~~~N~~i~----~~v~~~i~~~~p~aivivvtNPv  121 (145)
T d2cmda1          71 DVVLISAGVRRKP-------GMDR---SDLFNVNAGIV----KNLVQQVAKTCPKACIGIITNPV  121 (145)
T ss_dssp             SEEEECCSCCCCT-------TCCG---GGGHHHHHHHH----HHHHHHHHHHCTTSEEEECSSSH
T ss_pred             CEEEECCCccCCC-------Ccch---hhHHHHHHHHH----HHHHHHHHhhCCCcEEEEccCCc
Confidence            9999999974321       1122   22345565443    333344433 3456777777644

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=96.65  E-value=0.0028  Score=48.62  Aligned_cols=45  Identities=27%  Similarity=0.370  Sum_probs=37.9

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCC-eEEEEecCcchhhhHhhhc
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGA-KVVIADVEDTLGSVLASTL   75 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~-~vv~~~r~~~~~~~~~~~~   75 (305)
                      ++|.|+|.|+ ||.+++++..|.+.|+ ++.++.|+.++.+.+.+..
T Consensus        16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~   61 (167)
T d1npya1          16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALY   61 (167)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHH
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhh
Confidence            4688999997 8999999999999997 6899999987776665544

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=96.61  E-value=0.0078  Score=45.33  Aligned_cols=112  Identities=12%  Similarity=0.051  Sum_probs=59.9

Q ss_pred             CEEEEecCCCchHHHHHHHHHHcCC-------eEEEEe--cCcchhhhHhhhc---CCCCeEEEEecCCCHHHHHHHHHH
Q 021960           32 KVAIITGGARGIGEAAVRLFARHGA-------KVVIAD--VEDTLGSVLASTL---APAPVTFVHCDVSLEEDIENLINS   99 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~g~-------~vv~~~--r~~~~~~~~~~~~---~~~~v~~~~~D~~d~~~i~~~~~~   99 (305)
                      ..|.|+||+|.+|.+++..|+..+.       ...++.  ......+......   ....+..+...-.+.+.       
T Consensus         5 ~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------   77 (154)
T d1y7ta1           5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATDDPKVA-------   77 (154)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHH-------
T ss_pred             CEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccccccccccccCCchhhh-------
Confidence            4799999999999999999998653       122222  2222222211111   12234444443333222       


Q ss_pred             HHHhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC-C-CCEEEEec
Q 021960          100 TVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINR-G-GGCIISTA  168 (305)
Q Consensus       100 ~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~-~~~iv~is  168 (305)
                          ...-|++|..+|....       ...+.+++   ++.|+.-    ++.+.+.+.+. + .+.|+++|
T Consensus        78 ----~~~advViitaG~~~~-------pg~~r~dl---~~~N~~i----~~~~~~~i~k~a~~~~~vivvs  130 (154)
T d1y7ta1          78 ----FKDADYALLVGAAPRK-------AGMERRDL---LQVNGKI----FTEQGRALAEVAKKDVKVLVVG  130 (154)
T ss_dssp             ----TTTCSEEEECCCCCCC-------TTCCHHHH---HHHHHHH----HHHHHHHHHHHSCTTCEEEECS
T ss_pred             ----cccccEEEeecCcCCC-------CCCcHHHH---HHHHHHH----HHHHHHHHHHhCCCCcEEEEec
Confidence                2368999999997422       22344443   4555543    45555555542 3 35566655

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.57  E-value=0.0044  Score=47.10  Aligned_cols=76  Identities=21%  Similarity=0.271  Sum_probs=50.2

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDI  109 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~  109 (305)
                      .|.+|+|.|+ |++|...+..+...|++|+++++++.+.+...+ +...  ++  +|.++.+..+.+.    +..+..+.
T Consensus        27 ~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a~~-~Ga~--~~--i~~~~~~~~~~~~----~~~~g~~~   96 (166)
T d1llua2          27 PGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLELARK-LGAS--LT--VNARQEDPVEAIQ----RDIGGAHG   96 (166)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-TTCS--EE--EETTTSCHHHHHH----HHHSSEEE
T ss_pred             CCCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHhhhc-cCcc--cc--ccccchhHHHHHH----HhhcCCcc
Confidence            4789999886 999999988888889999999998887766544 3222  22  3555544443332    23344555


Q ss_pred             EEEcCC
Q 021960          110 LYNNAG  115 (305)
Q Consensus       110 li~nag  115 (305)
                      +|-+++
T Consensus        97 ~i~~~~  102 (166)
T d1llua2          97 VLVTAV  102 (166)
T ss_dssp             EEECCS
T ss_pred             cccccc
Confidence            555554

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.52  E-value=0.0079  Score=45.83  Aligned_cols=76  Identities=18%  Similarity=0.184  Sum_probs=50.9

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDI  109 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~  109 (305)
                      .|.+++|.|+ |++|...+..+...|++|+++++++.+.+...+. ... . ++  |..+...   ..   .+..+.+|.
T Consensus        27 ~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a~~l-Ga~-~-~i--~~~~~~~---~~---~~~~~~~d~   94 (168)
T d1piwa2          27 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMKM-GAD-H-YI--ATLEEGD---WG---EKYFDTFDL   94 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHH-TCS-E-EE--EGGGTSC---HH---HHSCSCEEE
T ss_pred             CCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHhhcc-CCc-E-Ee--eccchHH---HH---Hhhhcccce
Confidence            5789999987 8999998887778899999999998877765443 222 2 22  2222111   11   122346899


Q ss_pred             EEEcCCCC
Q 021960          110 LYNNAGVL  117 (305)
Q Consensus       110 li~nag~~  117 (305)
                      ++.+.+..
T Consensus        95 vi~~~~~~  102 (168)
T d1piwa2          95 IVVCASSL  102 (168)
T ss_dssp             EEECCSCS
T ss_pred             EEEEecCC
Confidence            99887753

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=96.51  E-value=0.0035  Score=48.39  Aligned_cols=79  Identities=16%  Similarity=0.230  Sum_probs=51.8

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCe-EEEEecCcchhhhHhhhcCCCCeEEEEecCCC-HHHHHHHHHHHHHhcCCc
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAK-VVIADVEDTLGSVLASTLAPAPVTFVHCDVSL-EEDIENLINSTVSRYGRL  107 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~-vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d-~~~i~~~~~~~~~~~g~i  107 (305)
                      .|.+|+|.|+ |+||...+..+...|++ |+++++++.+.+..++ +...  .+  +|... .+..+...+...  .+.+
T Consensus        28 ~G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~~-~Ga~--~~--i~~~~~~~~~~~~~~~~~--~~G~   99 (174)
T d1e3ia2          28 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKA-LGAT--DC--LNPRELDKPVQDVITELT--AGGV   99 (174)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-TTCS--EE--ECGGGCSSCHHHHHHHHH--TSCB
T ss_pred             CCCEEEEECC-ChHHHHHHHHHHHhCCceeeeeccchHHHHHHHH-hCCC--cc--cCCccchhhhhhhHhhhh--cCCC
Confidence            5789999975 99999999999999984 7777888877665544 3222  12  23221 122333333322  2469


Q ss_pred             cEEEEcCCC
Q 021960          108 DILYNNAGV  116 (305)
Q Consensus       108 d~li~nag~  116 (305)
                      |++|-+.|.
T Consensus       100 d~vie~~G~  108 (174)
T d1e3ia2         100 DYSLDCAGT  108 (174)
T ss_dssp             SEEEESSCC
T ss_pred             cEEEEeccc
Confidence            999999984

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=96.44  E-value=0.0094  Score=44.51  Aligned_cols=80  Identities=21%  Similarity=0.134  Sum_probs=52.6

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDI  109 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~  109 (305)
                      +-|++.|.||.|.+|..+++.|.+.|++|.+.+|+........  ..+..+.....   ...++..++.++.....+=.+
T Consensus         8 ~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~~~~--~~~~~~v~~~~---~~~~~~~v~~~~~~~~~~~~i   82 (152)
T d2pv7a2           8 DIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVAESI--LANADVVIVSV---PINLTLETIERLKPYLTENML   82 (152)
T ss_dssp             TCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGHHHH--HTTCSEEEECS---CGGGHHHHHHHHGGGCCTTSE
T ss_pred             CCCeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccccccchh--hhhcccccccc---chhhheeeeecccccccCCce
Confidence            3478999999999999999999999999999999876544322  23333433333   345566666666554332234


Q ss_pred             EEEcC
Q 021960          110 LYNNA  114 (305)
Q Consensus       110 li~na  114 (305)
                      ++..+
T Consensus        83 iiD~~   87 (152)
T d2pv7a2          83 LADLT   87 (152)
T ss_dssp             EEECC
T ss_pred             EEEec
Confidence            44443

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.43  E-value=0.0033  Score=48.24  Aligned_cols=79  Identities=16%  Similarity=0.220  Sum_probs=50.2

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCe-EEEEecCcchhhhHhhhcCCCCeEEEEecCCC-HHHHHHHHHHHHHhcCCc
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAK-VVIADVEDTLGSVLASTLAPAPVTFVHCDVSL-EEDIENLINSTVSRYGRL  107 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~-vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d-~~~i~~~~~~~~~~~g~i  107 (305)
                      .|.+|+|.|+ ||+|...+..+...|+. |+.+++++.+.+... .+...  ++  +|..+ .+.+.+.++...  .+.+
T Consensus        28 ~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~ak-~lGa~--~~--i~~~~~~~~~~~~~~~~~--~~g~   99 (176)
T d2fzwa2          28 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAK-EFGAT--EC--INPQDFSKPIQEVLIEMT--DGGV   99 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HHTCS--EE--ECGGGCSSCHHHHHHHHT--TSCB
T ss_pred             CCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHHHHH-HhCCc--EE--EeCCchhhHHHHHHHHHc--CCCC
Confidence            5789999998 59999999999999975 556666666655444 34322  12  23322 233344333332  2359


Q ss_pred             cEEEEcCCC
Q 021960          108 DILYNNAGV  116 (305)
Q Consensus       108 d~li~nag~  116 (305)
                      |++|.+.|.
T Consensus       100 D~vid~~G~  108 (176)
T d2fzwa2         100 DYSFECIGN  108 (176)
T ss_dssp             SEEEECSCC
T ss_pred             cEeeecCCC
Confidence            999999884

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.42  E-value=0.0024  Score=45.51  Aligned_cols=59  Identities=19%  Similarity=0.285  Sum_probs=42.5

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCC
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVS   88 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~   88 (305)
                      .+++||++||.|+ |.+|..-++.|++.|+.|++.+......  ........++.+..-++.
T Consensus         8 l~l~~k~vlVvG~-G~va~~ka~~ll~~ga~v~v~~~~~~~~--~~~~~~~~~i~~~~~~~~   66 (113)
T d1pjqa1           8 CQLRDRDCLIVGG-GDVAERKARLLLEAGARLTVNALTFIPQ--FTVWANEGMLTLVEGPFD   66 (113)
T ss_dssp             ECCBTCEEEEECC-SHHHHHHHHHHHHTTBEEEEEESSCCHH--HHHHHTTTSCEEEESSCC
T ss_pred             EEeCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeccCChH--HHHHHhcCCceeeccCCC
Confidence            4789999999997 6899999999999999999887654322  222223344666655554

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=96.39  E-value=0.0041  Score=47.04  Aligned_cols=37  Identities=11%  Similarity=0.011  Sum_probs=32.4

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhh
Q 021960           33 VAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSV   70 (305)
Q Consensus        33 ~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~   70 (305)
                      +++|.|+ |.+|..++..|++.|++|.+++|+......
T Consensus         2 kI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~~~~   38 (167)
T d1ks9a2           2 KITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQPYCS   38 (167)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSEEE
T ss_pred             EEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHHhhh
Confidence            6889998 999999999999999999999998765443

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=96.35  E-value=0.0051  Score=46.15  Aligned_cols=76  Identities=8%  Similarity=-0.007  Sum_probs=54.3

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEEEE
Q 021960           33 VAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILYN  112 (305)
Q Consensus        33 ~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~li~  112 (305)
                      .++|.|. |.+|..+++.|.++|.++++++.++.......+......+.++..|.+|++.++++-      ..+.+.+|.
T Consensus         5 HiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~~~vi~Gd~~d~~~L~~a~------i~~a~~vi~   77 (153)
T d1id1a_           5 HFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAG------IDRCRAILA   77 (153)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHT------TTTCSEEEE
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhcCCcEEEEccCcchHHHHHhc------cccCCEEEE
Confidence            5788886 799999999999999999999877654333333333345888999999986665531      125677876


Q ss_pred             cCC
Q 021960          113 NAG  115 (305)
Q Consensus       113 nag  115 (305)
                      ..+
T Consensus        78 ~~~   80 (153)
T d1id1a_          78 LSD   80 (153)
T ss_dssp             CSS
T ss_pred             ccc
Confidence            643

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=96.25  E-value=0.003  Score=48.71  Aligned_cols=79  Identities=18%  Similarity=0.175  Sum_probs=52.3

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCC-eEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHH-HHHHHHHHHHHhcCCc
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGA-KVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEE-DIENLINSTVSRYGRL  107 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~-~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~-~i~~~~~~~~~~~g~i  107 (305)
                      .|.+|+|.|+ |++|...+..+...|+ +|+++++++.+.+...+ +...  .+  +|.++.+ .+.+..+..  ..+.+
T Consensus        27 ~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~-lGa~--~~--i~~~~~d~~~~~~~~~~--~~~G~   98 (174)
T d1p0fa2          27 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIE-LGAT--EC--LNPKDYDKPIYEVICEK--TNGGV   98 (174)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH-TTCS--EE--ECGGGCSSCHHHHHHHH--TTSCB
T ss_pred             CCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHHHH-cCCc--EE--EcCCCchhHHHHHHHHh--cCCCC
Confidence            5789999986 8999999999999997 58888888887776544 3222  12  3443222 122222222  12359


Q ss_pred             cEEEEcCCC
Q 021960          108 DILYNNAGV  116 (305)
Q Consensus       108 d~li~nag~  116 (305)
                      |++|-+.|.
T Consensus        99 d~vid~~g~  107 (174)
T d1p0fa2          99 DYAVECAGR  107 (174)
T ss_dssp             SEEEECSCC
T ss_pred             cEEEEcCCC
Confidence            999998874

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.20  E-value=0.024  Score=42.26  Aligned_cols=37  Identities=19%  Similarity=0.395  Sum_probs=31.4

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCC--eEEEEecCcch
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGA--KVVIADVEDTL   67 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~--~vv~~~r~~~~   67 (305)
                      .++++.|+|+ |.+|.++|..|+.+|.  .++++++++..
T Consensus         5 ~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~   43 (148)
T d1ldna1           5 GGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESK   43 (148)
T ss_dssp             TSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHH
T ss_pred             CCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeecccc
Confidence            4678888897 9999999999999875  59999987655

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=96.15  E-value=0.01  Score=46.64  Aligned_cols=41  Identities=24%  Similarity=0.400  Sum_probs=35.6

Q ss_pred             CCCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcc
Q 021960           25 SHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDT   66 (305)
Q Consensus        25 ~~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~   66 (305)
                      ....+.||++.|.| .|.||+.+|+.|...|++|+..++...
T Consensus        37 ~g~el~gk~vgIiG-~G~IG~~va~~l~~fg~~V~~~d~~~~   77 (197)
T d1j4aa1          37 IGREVRDQVVGVVG-TGHIGQVFMQIMEGFGAKVITYDIFRN   77 (197)
T ss_dssp             CBCCGGGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             cCccccCCeEEEec-ccccchhHHHhHhhhcccccccCcccc
Confidence            34578999999999 589999999999999999999886544

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=96.14  E-value=0.022  Score=42.92  Aligned_cols=78  Identities=13%  Similarity=0.089  Sum_probs=51.9

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc------------CCCCeEEEEecCCCHHHHHHHHHHH
Q 021960           33 VAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL------------APAPVTFVHCDVSLEEDIENLINST  100 (305)
Q Consensus        33 ~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~------------~~~~v~~~~~D~~d~~~i~~~~~~~  100 (305)
                      .+.|.|. |-+|.++|+.|.+.|++|++.+|+++..+...+..            .+.++.++.   ...++++++++++
T Consensus         2 kI~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~DiIila---vp~~~~~~vl~~l   77 (165)
T d2f1ka2           2 KIGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLLQTAKIIFLC---TPIQLILPTLEKL   77 (165)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGGGGTTCSEEEEC---SCHHHHHHHHHHH
T ss_pred             EEEEEee-cHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHhhccceeeeeccccccccccccc---CcHhhhhhhhhhh
Confidence            4667775 99999999999999999999999876655433321            122333322   2467888888888


Q ss_pred             HHhcCCccEEEEcC
Q 021960          101 VSRYGRLDILYNNA  114 (305)
Q Consensus       101 ~~~~g~id~li~na  114 (305)
                      .+...+=.+|+..+
T Consensus        78 ~~~l~~~~iv~~~~   91 (165)
T d2f1ka2          78 IPHLSPTAIVTDVA   91 (165)
T ss_dssp             GGGSCTTCEEEECC
T ss_pred             hhhcccccceeecc
Confidence            66554334455443

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=95.96  E-value=0.044  Score=40.60  Aligned_cols=36  Identities=19%  Similarity=0.227  Sum_probs=29.7

Q ss_pred             CEEEEecCCCchHHHHHHHHHHcCC--eEEEEecCcchh
Q 021960           32 KVAIITGGARGIGEAAVRLFARHGA--KVVIADVEDTLG   68 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~g~--~vv~~~r~~~~~   68 (305)
                      |++.|+|+ |.+|..+|..|+.+|.  .++++++++...
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~   39 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKV   39 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHH
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchh
Confidence            56778895 9999999999998874  689999876653

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=95.92  E-value=0.014  Score=44.05  Aligned_cols=43  Identities=28%  Similarity=0.346  Sum_probs=35.9

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhh
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLAS   73 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~   73 (305)
                      .|.++||.|+ |++|...+..+...|++|+++++++.+.+..++
T Consensus        27 ~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~k~   69 (168)
T d1rjwa2          27 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKE   69 (168)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             CCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHhhhhhh
Confidence            4789999875 899999888888899999999988887766544

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=95.89  E-value=0.06  Score=37.83  Aligned_cols=71  Identities=8%  Similarity=0.109  Sum_probs=53.6

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDI  109 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~  109 (305)
                      ...++.|.|| |-+|+-++....+.|+++++++.++..-...  ..    -.++..|+.|.+.+.++..+.     .+|+
T Consensus        10 ~~~kigIlGg-GQL~rMla~aA~~lG~~v~v~d~~~~~PA~~--va----~~~i~~~~~d~~~l~~~~~~~-----~~Dv   77 (111)
T d1kjqa2          10 AATRVMLLGS-GELGKEVAIECQRLGVEVIAVDRYADAPAMH--VA----HRSHVINMLDGDALRRVVELE-----KPHY   77 (111)
T ss_dssp             TCCEEEEESC-SHHHHHHHHHHHTTTCEEEEEESSTTCGGGG--GS----SEEEECCTTCHHHHHHHHHHH-----CCSE
T ss_pred             CCCEEEEEeC-CHHHHHHHHHHHHCCCEEEEEcCCCCCchhh--cC----CeEEECCCCCHHHHHHHHHhh-----CCce
Confidence            3457999995 7999999999999999999998765432211  00    245778999999999887654     6888


Q ss_pred             EEE
Q 021960          110 LYN  112 (305)
Q Consensus       110 li~  112 (305)
                      |.+
T Consensus        78 iT~   80 (111)
T d1kjqa2          78 IVP   80 (111)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            865

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=95.83  E-value=0.067  Score=39.35  Aligned_cols=108  Identities=16%  Similarity=0.134  Sum_probs=57.5

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCC--eEEEEecCcchhhhHhhhcC-----CCCeEEEEecCCCHHHHHHHHHHHHHhcC
Q 021960           33 VAIITGGARGIGEAAVRLFARHGA--KVVIADVEDTLGSVLASTLA-----PAPVTFVHCDVSLEEDIENLINSTVSRYG  105 (305)
Q Consensus        33 ~vlVtGas~giG~~ia~~l~~~g~--~vv~~~r~~~~~~~~~~~~~-----~~~v~~~~~D~~d~~~i~~~~~~~~~~~g  105 (305)
                      ++.|.|+ |.+|.+++..++.++.  .++++++++.........+.     .........   +.+           ...
T Consensus         3 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~---~~~-----------~~~   67 (142)
T d1y6ja1           3 KVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAG---DYS-----------DVK   67 (142)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----CGG-----------GGT
T ss_pred             eEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeC---cHH-----------HhC
Confidence            4566697 9999999999998875  69999987654322222111     111221111   221           123


Q ss_pred             CccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHc-CCCCEEEEecc
Q 021960          106 RLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMIN-RGGGCIISTAS  169 (305)
Q Consensus       106 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~~iv~isS  169 (305)
                      .-|++|..||.....       .   ++-...+..|..-    ++.+.+.+.+ .+.+.++++|-
T Consensus        68 ~adivvitag~~~~~-------~---~~r~~l~~~N~~i----~~~i~~~i~~~~p~ai~ivvtN  118 (142)
T d1y6ja1          68 DCDVIVVTAGANRKP-------G---ETRLDLAKKNVMI----AKEVTQNIMKYYNHGVILVVSN  118 (142)
T ss_dssp             TCSEEEECCCC----------------CHHHHHHHHHHH----HHHHHHHHHHHCCSCEEEECSS
T ss_pred             CCceEEEecccccCc-------C---cchhHHhhHHHHH----HHHHHHHhhccCCCceEEEecC
Confidence            579999999864221       1   2233445566644    3444444444 34566666654

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=95.83  E-value=0.0098  Score=46.62  Aligned_cols=80  Identities=15%  Similarity=0.112  Sum_probs=51.2

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCC-eEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGA-KVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLD  108 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~-~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id  108 (305)
                      .|.+|||.|+ |++|...+..+...|+ +|+++++++.+.+...+.  +.  . ...|-.+.+-.+++. ++-.. ..+|
T Consensus        25 ~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~~--Ga--~-~~~~~~~~~~~~~i~-~~t~g-~g~D   96 (195)
T d1kola2          25 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQ--GF--E-IADLSLDTPLHEQIA-ALLGE-PEVD   96 (195)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT--TC--E-EEETTSSSCHHHHHH-HHHSS-SCEE
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhhhhc--cc--c-EEEeCCCcCHHHHHH-HHhCC-CCcE
Confidence            5789999986 8999888888777787 677888887776655433  22  1 223444432233222 22211 2489


Q ss_pred             EEEEcCCCC
Q 021960          109 ILYNNAGVL  117 (305)
Q Consensus       109 ~li~nag~~  117 (305)
                      ++|.+.|.-
T Consensus        97 ~vid~vG~~  105 (195)
T d1kola2          97 CAVDAVGFE  105 (195)
T ss_dssp             EEEECCCTT
T ss_pred             EEEECcccc
Confidence            999998853

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=95.76  E-value=0.064  Score=39.39  Aligned_cols=71  Identities=17%  Similarity=0.168  Sum_probs=45.3

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCC--eEEEEecCcchhhhHhhhc------CCCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           33 VAIITGGARGIGEAAVRLFARHGA--KVVIADVEDTLGSVLASTL------APAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        33 ~vlVtGas~giG~~ia~~l~~~g~--~vv~~~r~~~~~~~~~~~~------~~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      ++.|+|| |.+|.+++..|+..+.  .++++++++.........+      ...+..+...  .|.+.           .
T Consensus         2 KI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~--~~~~~-----------~   67 (142)
T d1guza1           2 KITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--NDYAD-----------T   67 (142)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SCGGG-----------G
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEec--CCHHH-----------h
Confidence            4677896 9999999999999874  7999998876543322111      1122323222  22222           2


Q ss_pred             CCccEEEEcCCCC
Q 021960          105 GRLDILYNNAGVL  117 (305)
Q Consensus       105 g~id~li~nag~~  117 (305)
                      ..-|++|.++|..
T Consensus        68 ~dadvvvitag~~   80 (142)
T d1guza1          68 ANSDIVIITAGLP   80 (142)
T ss_dssp             TTCSEEEECCSCC
T ss_pred             cCCeEEEEEEecC
Confidence            3679999999864

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.76  E-value=0.023  Score=43.38  Aligned_cols=82  Identities=21%  Similarity=0.197  Sum_probs=52.6

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecC--CCHHHHHHHHHHHHHhc
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDV--SLEEDIENLINSTVSRY  104 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~--~d~~~i~~~~~~~~~~~  104 (305)
                      .+++||.++|.|-|.=+|+-++..|+++|+.|.++..+...........  .-......|+  -..+.+++...      
T Consensus        25 ~~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~lk~~~~------   96 (171)
T d1edza1          25 NRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESL--KLNKHHVEDLGEYSEDLLKKCSL------   96 (171)
T ss_dssp             CTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCS--SCCCCEEEEEEECCHHHHHHHHH------
T ss_pred             CCCCCCEEEEECCccccHHHHHHHHHHCCCEEEEeccccccccccccce--eeeeeccccccccchhHHhhccc------
Confidence            4789999999999999999999999999999998865432210000000  0011112222  23455665544      


Q ss_pred             CCccEEEEcCCCC
Q 021960          105 GRLDILYNNAGVL  117 (305)
Q Consensus       105 g~id~li~nag~~  117 (305)
                       ..|++|...|..
T Consensus        97 -~aDIvIsavG~p  108 (171)
T d1edza1          97 -DSDVVITGVPSE  108 (171)
T ss_dssp             -HCSEEEECCCCT
T ss_pred             -cCCEEEEccCCC
Confidence             479999888753

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.73  E-value=0.024  Score=43.87  Aligned_cols=70  Identities=26%  Similarity=0.230  Sum_probs=47.7

Q ss_pred             ccCCCCCCCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHh---------hhcCCCCeEEEEecCCC
Q 021960           19 WDDAPPSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLA---------STLAPAPVTFVHCDVSL   89 (305)
Q Consensus        19 ~~~~~~~~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~---------~~~~~~~v~~~~~D~~d   89 (305)
                      |.........+.+|++.|.|. |.||+++++.+...|++|+..++.........         +.+...++..+.|.+++
T Consensus        32 W~~~~~~~~~l~~k~vgiiG~-G~IG~~va~~~~~fg~~v~~~d~~~~~~~~~~~~~~~~~l~ell~~sDiv~~~~Plt~  110 (184)
T d1ygya1          32 WKRSSFSGTEIFGKTVGVVGL-GRIGQLVAQRIAAFGAYVVAYDPYVSPARAAQLGIELLSLDDLLARADFISVHLPKTP  110 (184)
T ss_dssp             CCGGGCCBCCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSCHHHHHHHTCEECCHHHHHHHCSEEEECCCCST
T ss_pred             CCccccccccccceeeeeccc-cchhHHHHHHhhhccceEEeecCCCChhHHhhcCceeccHHHHHhhCCEEEEcCCCCc
Confidence            433333445778999999995 89999999999999999999987644322211         12233456666666664

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=95.72  E-value=0.014  Score=45.11  Aligned_cols=61  Identities=20%  Similarity=0.217  Sum_probs=44.6

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchh-----hhHhhhcCCCCeEEEEecCC
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLG-----SVLASTLAPAPVTFVHCDVS   88 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~-----~~~~~~~~~~~v~~~~~D~~   88 (305)
                      ..+.||++.|.|. |.||+.+++.+...|++|+..++.....     ..+.+.+...++..+.+.++
T Consensus        38 ~~l~gk~vgIiG~-G~IG~~va~~l~~~g~~v~~~d~~~~~~~~~~~~~l~ell~~sDiv~~~~pl~  103 (181)
T d1qp8a1          38 PLIQGEKVAVLGL-GEIGTRVGKILAALGAQVRGFSRTPKEGPWRFTNSLEEALREARAAVCALPLN  103 (181)
T ss_dssp             CCCTTCEEEEESC-STHHHHHHHHHHHTTCEEEEECSSCCCSSSCCBSCSHHHHTTCSEEEECCCCS
T ss_pred             CcccCceEEEecc-ccccccceeeeeccccccccccccccccceeeeechhhhhhccchhhcccccc
Confidence            3689999999996 6899999999999999999998864321     11223334555666666555

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=95.69  E-value=0.016  Score=44.15  Aligned_cols=78  Identities=18%  Similarity=0.265  Sum_probs=50.2

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCC-eEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGA-KVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLD  108 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~-~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id  108 (305)
                      .|.+|+|.|+ |++|...+..+...|+ .|+++++++.+.+.+.+. ...  ++  .|..+ +.++...+...  ...+|
T Consensus        32 ~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~~-ga~--~~--i~~~~-~~~~~~~~~~~--~~g~d  102 (172)
T d1h2ba2          32 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERL-GAD--HV--VDARR-DPVKQVMELTR--GRGVN  102 (172)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHT-TCS--EE--EETTS-CHHHHHHHHTT--TCCEE
T ss_pred             CCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHHhhc-ccc--ee--ecCcc-cHHHHHHHhhC--CCCce
Confidence            4789999986 9999999988888887 566677877766655443 222  22  34433 33333332211  12499


Q ss_pred             EEEEcCCC
Q 021960          109 ILYNNAGV  116 (305)
Q Consensus       109 ~li~nag~  116 (305)
                      ++|.++|.
T Consensus       103 ~vid~~g~  110 (172)
T d1h2ba2         103 VAMDFVGS  110 (172)
T ss_dssp             EEEESSCC
T ss_pred             EEEEecCc
Confidence            99999884

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=95.64  E-value=0.028  Score=42.06  Aligned_cols=34  Identities=18%  Similarity=0.238  Sum_probs=26.2

Q ss_pred             CEEEEecCCCchHHHHHHHHHHcCC-------eEEEEecCc
Q 021960           32 KVAIITGGARGIGEAAVRLFARHGA-------KVVIADVED   65 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~g~-------~vv~~~r~~   65 (305)
                      ..|.|+||+|.+|.+++..|+..+.       .+++.+..+
T Consensus         4 ~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~   44 (154)
T d5mdha1           4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITP   44 (154)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGG
T ss_pred             eEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCcc
Confidence            4789999999999999999987542       355555543

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=95.61  E-value=0.019  Score=43.75  Aligned_cols=79  Identities=18%  Similarity=0.261  Sum_probs=50.6

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCC-eEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHH-HHHHHHHHHHhcCCc
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGA-KVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEED-IENLINSTVSRYGRL  107 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~-~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~-i~~~~~~~~~~~g~i  107 (305)
                      .|.+|+|.|+ ||+|...+..++..|. +|+.+++++.+.+...+ +...  ++  +|..+.+. .++..+...  .+.+
T Consensus        28 ~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~-~GAd--~~--in~~~~~~~~~~~~~~~~--~~G~   99 (175)
T d1cdoa2          28 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKV-FGAT--DF--VNPNDHSEPISQVLSKMT--NGGV   99 (175)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-TTCC--EE--ECGGGCSSCHHHHHHHHH--TSCB
T ss_pred             CCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHHHH-cCCc--EE--EcCCCcchhHHHHHHhhc--cCCc
Confidence            5789999986 7789888888888877 57778888887766544 3222  22  24333221 222222221  1369


Q ss_pred             cEEEEcCCC
Q 021960          108 DILYNNAGV  116 (305)
Q Consensus       108 d~li~nag~  116 (305)
                      |+++-+.|.
T Consensus       100 d~vid~~G~  108 (175)
T d1cdoa2         100 DFSLECVGN  108 (175)
T ss_dssp             SEEEECSCC
T ss_pred             ceeeeecCC
Confidence            999999884

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=95.60  E-value=0.04  Score=42.68  Aligned_cols=69  Identities=23%  Similarity=0.172  Sum_probs=44.9

Q ss_pred             ccCCCCCCCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhh-------hHhhhcCCCCeEEEEecCC
Q 021960           19 WDDAPPSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGS-------VLASTLAPAPVTFVHCDVS   88 (305)
Q Consensus        19 ~~~~~~~~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~-------~~~~~~~~~~v~~~~~D~~   88 (305)
                      |.........+.++++.|.| .|.||+.+++.+...|++|+..++......       .+.+.+...++..+.+.++
T Consensus        32 w~~~~~~~~~l~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~l~ell~~sDii~i~~plt  107 (188)
T d1sc6a1          32 GNKLAAGSFEARGKKLGIIG-YGHIGTQLGILAESLGMYVYFYDIENKLPLGNATQVQHLSDLLNMSDVVSLHVPEN  107 (188)
T ss_dssp             CC-----CCCSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCCCCTTCEECSCHHHHHHHCSEEEECCCSS
T ss_pred             CcccccccccccceEEEEee-cccchhhhhhhcccccceEeeccccccchhhhhhhhhhHHHHHhhccceeecccCC
Confidence            54444445578999999997 589999999999999999999987543211       1222223344666666665

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=95.51  E-value=0.1  Score=38.87  Aligned_cols=38  Identities=26%  Similarity=0.229  Sum_probs=30.8

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCC-eEEEEecCcchh
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGA-KVVIADVEDTLG   68 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~-~vv~~~r~~~~~   68 (305)
                      +.+++.|.|+ |.+|..++..|+..+. ++++++.++...
T Consensus         6 k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~   44 (154)
T d1pzga1           6 RRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMP   44 (154)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHH
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccc
Confidence            3567888897 9999999999988885 788998876543

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=95.49  E-value=0.048  Score=42.42  Aligned_cols=64  Identities=22%  Similarity=0.243  Sum_probs=45.5

Q ss_pred             CCCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhh----------HhhhcCCCCeEEEEecCCC
Q 021960           25 SHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSV----------LASTLAPAPVTFVHCDVSL   89 (305)
Q Consensus        25 ~~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~----------~~~~~~~~~v~~~~~D~~d   89 (305)
                      ....+.||++.|.|. |.||+.+|+.+...|++|+..++.......          +.+.+...++..+.+.+++
T Consensus        43 ~~~eL~gktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~~~~l~~ll~~sD~i~~~~plt~  116 (193)
T d1mx3a1          43 GAARIRGETLGIIGL-GRVGQAVALRAKAFGFNVLFYDPYLSDGVERALGLQRVSTLQDLLFHSDCVTLHCGLNE  116 (193)
T ss_dssp             TCCCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSCTTHHHHHTCEECSSHHHHHHHCSEEEECCCCCT
T ss_pred             CceeeeCceEEEecc-ccccccceeeeeccccceeeccCcccccchhhhccccccchhhccccCCEEEEeecccc
Confidence            345789999999985 899999999999999999998875433211          1122233456666666653

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=95.47  E-value=0.038  Score=42.20  Aligned_cols=82  Identities=15%  Similarity=0.082  Sum_probs=57.0

Q ss_pred             CEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcC-----------------CCCeEEEEecCCCHHHHH
Q 021960           32 KVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLA-----------------PAPVTFVHCDVSLEEDIE   94 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~-----------------~~~v~~~~~D~~d~~~i~   94 (305)
                      +.+-|.|- |-+|.++|+.|++.|++|++.+|+.++.+.+.+...                 -.....+...+.+.+.+.
T Consensus         3 ~nIg~IGl-G~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~ii~~~~~~~~v~   81 (176)
T d2pgda2           3 ADIALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAGQAVD   81 (176)
T ss_dssp             BSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECSCTTHHHH
T ss_pred             CcEEEEeE-hHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhccccccccchhhhhhhhhhhcccceEEEecCchHHHH
Confidence            45677774 899999999999999999999998877665543210                 011233445566778888


Q ss_pred             HHHHHHHHhcCCccEEEEcC
Q 021960           95 NLINSTVSRYGRLDILYNNA  114 (305)
Q Consensus        95 ~~~~~~~~~~g~id~li~na  114 (305)
                      .+.+.+.....+=+++|...
T Consensus        82 ~v~~~l~~~~~~g~iiid~s  101 (176)
T d2pgda2          82 NFIEKLVPLLDIGDIIIDGG  101 (176)
T ss_dssp             HHHHHHHHHCCTTCEEEECS
T ss_pred             HHHHHHHhccccCcEEEecC
Confidence            88887776654445666554

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=95.46  E-value=0.034  Score=43.56  Aligned_cols=104  Identities=19%  Similarity=0.263  Sum_probs=61.6

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhh-------hHhhhcCCCCeEEEEecCCCHHHHHHHHH
Q 021960           26 HRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGS-------VLASTLAPAPVTFVHCDVSLEEDIENLIN   98 (305)
Q Consensus        26 ~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~-------~~~~~~~~~~v~~~~~D~~d~~~i~~~~~   98 (305)
                      ..++.||++.|.|. |.||+.+++.|...|++|+..++......       .+.+.+...++..+.+.+++..  +.+++
T Consensus        40 ~~~l~~ktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~l~~l~~~~D~v~~~~plt~~T--~~li~  116 (199)
T d1dxya1          40 GKELGQQTVGVMGT-GHIGQVAIKLFKGFGAKVIAYDPYPMKGDHPDFDYVSLEDLFKQSDVIDLHVPGIEQN--THIIN  116 (199)
T ss_dssp             CCCGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSSCCTTCEECCHHHHHHHCSEEEECCCCCGGG--TTSBC
T ss_pred             cccccceeeeeeec-ccccccccccccccceeeeccCCccchhhhcchhHHHHHHHHHhcccceeeecccccc--ccccc
Confidence            35788999999995 89999999999999999999987543211       1112223345666666665321  11111


Q ss_pred             -HHHHhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHh
Q 021960           99 -STVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNV  142 (305)
Q Consensus        99 -~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~  142 (305)
                       +..+.. +.+.++.|.|-..       +  ++.+++.+.++.+-
T Consensus       117 ~~~l~~m-k~~a~lIN~aRG~-------v--vde~aL~~aL~~g~  151 (199)
T d1dxya1         117 EAAFNLM-KPGAIVINTARPN-------L--IDTQAMLSNLKSGK  151 (199)
T ss_dssp             HHHHHHS-CTTEEEEECSCTT-------S--BCHHHHHHHHHTTS
T ss_pred             HHHhhcc-CCceEEEecccHh-------h--hhhHHHHHHHhcCC
Confidence             122222 4556666666432       1  35666665555443

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=95.32  E-value=0.0049  Score=48.68  Aligned_cols=43  Identities=23%  Similarity=0.418  Sum_probs=36.7

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhh
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSV   70 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~   70 (305)
                      .+++||+++|-| .|.+|..+|+.|.+.|++|++.+.+......
T Consensus        23 ~~L~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~   65 (201)
T d1c1da1          23 GSLDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVAH   65 (201)
T ss_dssp             CCSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHH
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHHHHHH
Confidence            368999999998 6899999999999999999999877555443

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=95.31  E-value=0.012  Score=43.54  Aligned_cols=36  Identities=19%  Similarity=0.307  Sum_probs=29.2

Q ss_pred             CEEEEecCCCchHHHHHHHHHHcCC-eEEEEecCcchh
Q 021960           32 KVAIITGGARGIGEAAVRLFARHGA-KVVIADVEDTLG   68 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~g~-~vv~~~r~~~~~   68 (305)
                      +++.|+|+ |.+|.++|..|+.++. ++++++.++...
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~   38 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVP   38 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHH
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccc
Confidence            46777896 9999999999998875 788888876543

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=95.25  E-value=0.12  Score=38.77  Aligned_cols=115  Identities=15%  Similarity=0.094  Sum_probs=66.1

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCC--eEEEEecCcchhhhHhhhc------CCCCeEEEEecCCCHHHHHHHHHH
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGA--KVVIADVEDTLGSVLASTL------APAPVTFVHCDVSLEEDIENLINS   99 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~--~vv~~~r~~~~~~~~~~~~------~~~~v~~~~~D~~d~~~i~~~~~~   99 (305)
                      .+..+++.|.|+ |.+|.+++..|+.+|.  .++++++++.........+      .+.......   .|.+.+      
T Consensus        17 ~~~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~---~d~~~~------   86 (160)
T d1i0za1          17 TVPNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVAD---KDYSVT------   86 (160)
T ss_dssp             CCCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEEC---SSGGGG------
T ss_pred             cCCCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEec---cchhhc------
Confidence            445678888896 9999999999999986  6999998755432221111      122222222   222222      


Q ss_pred             HHHhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC-CCCEEEEecccc
Q 021960          100 TVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINR-GGGCIISTASVA  171 (305)
Q Consensus       100 ~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~isS~~  171 (305)
                           ..=|++|..||.....       ..+.   .+.+..|..    +++.+.+.+.+. ..+.++++|-..
T Consensus        87 -----~~adiVVitAg~~~~~-------g~tR---~~l~~~N~~----i~~~i~~~i~~~~p~aiiivvtNPv  140 (160)
T d1i0za1          87 -----ANSKIVVVTAGVRQQE-------GESR---LNLVQRNVN----VFKFIIPQIVKYSPDCIIIVVSNPV  140 (160)
T ss_dssp             -----TTCSEEEECCSCCCCT-------TCCG---GGGHHHHHH----HHHHHHHHHHHHCTTCEEEECSSSH
T ss_pred             -----ccccEEEEecCCcccc-------Ccch---HHHHHHHHH----HHHHHHHHHHhcCCCcEEEEeCCch
Confidence                 2579999999974321       1122   123344443    345555555544 456777776543

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=95.24  E-value=0.35  Score=35.28  Aligned_cols=109  Identities=17%  Similarity=0.134  Sum_probs=62.8

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCC--eEEEEecCcch--hh-hHhhh---c-CCCCeEEEEecCCCHHHHHHHHHHHHHh
Q 021960           33 VAIITGGARGIGEAAVRLFARHGA--KVVIADVEDTL--GS-VLAST---L-APAPVTFVHCDVSLEEDIENLINSTVSR  103 (305)
Q Consensus        33 ~vlVtGas~giG~~ia~~l~~~g~--~vv~~~r~~~~--~~-~~~~~---~-~~~~v~~~~~D~~d~~~i~~~~~~~~~~  103 (305)
                      ++.|+||+|.+|.++|..++.++.  .+++.+.....  .+ ...+.   . ..........|.   ++           
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~~---~~-----------   67 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGY---ED-----------   67 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCG---GG-----------
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCCH---HH-----------
Confidence            578999999999999999999876  58888854221  11 11111   0 122233333332   21           


Q ss_pred             cCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC-CCEEEEecc
Q 021960          104 YGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRG-GGCIISTAS  169 (305)
Q Consensus       104 ~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS  169 (305)
                      ...-|++|..||....     +  ..+   -.+.++.|..-    ++.+.+.+.+.. .+.++++|-
T Consensus        68 ~~~aDiVvitaG~~~~-----~--g~~---R~dl~~~N~~I----~~~i~~~i~~~~p~~i~ivvtN  120 (142)
T d1o6za1          68 TAGSDVVVITAGIPRQ-----P--GQT---RIDLAGDNAPI----MEDIQSSLDEHNDDYISLTTSN  120 (142)
T ss_dssp             GTTCSEEEECCCCCCC-----T--TCC---HHHHHHHHHHH----HHHHHHHHHTTCSCCEEEECCS
T ss_pred             hhhcCEEEEecccccc-----c--CCc---hhhHHHHHHHH----HHHHHHHHHhcCCCceEEEecC
Confidence            1257999999996421     1  123   33455666543    455666665543 566666654

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=95.14  E-value=0.052  Score=42.13  Aligned_cols=41  Identities=20%  Similarity=0.174  Sum_probs=35.1

Q ss_pred             CCCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcc
Q 021960           25 SHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDT   66 (305)
Q Consensus        25 ~~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~   66 (305)
                      ....+.||++.|.|. |.||+.+++.+...|++|+..++...
T Consensus        41 ~~~~l~g~tvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~   81 (191)
T d1gdha1          41 VGEKLDNKTLGIYGF-GSIGQALAKRAQGFDMDIDYFDTHRA   81 (191)
T ss_dssp             CBCCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCC
T ss_pred             ccceecccceEEeec-ccchHHHHHHHHhhcccccccccccc
Confidence            345788999999995 89999999999999999999877543

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=95.05  E-value=0.049  Score=39.37  Aligned_cols=73  Identities=19%  Similarity=0.312  Sum_probs=52.5

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEE-ecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEEE
Q 021960           33 VAIITGGARGIGEAAVRLFARHGAKVVIA-DVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILY  111 (305)
Q Consensus        33 ~vlVtGas~giG~~ia~~l~~~g~~vv~~-~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~li  111 (305)
                      .+.|.|++|..|+.+++.+.++|+.++.. +++..      +.+.+.+   +..|+|.++...+.++...+.  ++-.|+
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~------~~~~~~D---VvIDFS~p~~~~~~l~~~~~~--~~p~Vi   70 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGV------EELDSPD---VVIDFSSPEALPKTVDLCKKY--RAGLVL   70 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEE------EECSCCS---EEEECSCGGGHHHHHHHHHHH--TCEEEE
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCcH------HHhccCC---EEEEecCHHHHHHHHHHHHhc--CCCEEE
Confidence            58999999999999999999999887643 33321      1112223   456999999999999877665  355677


Q ss_pred             EcCCC
Q 021960          112 NNAGV  116 (305)
Q Consensus       112 ~nag~  116 (305)
                      -.-|.
T Consensus        71 GTTG~   75 (128)
T d1vm6a3          71 GTTAL   75 (128)
T ss_dssp             CCCSC
T ss_pred             EcCCC
Confidence            66553

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=95.02  E-value=0.011  Score=45.52  Aligned_cols=44  Identities=25%  Similarity=0.351  Sum_probs=36.6

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhh
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLAS   73 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~   73 (305)
                      +++||.|||.|+ ||.+++++..|.+.| +|.++.|+..+.+.+..
T Consensus        15 ~~~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~   58 (177)
T d1nvta1          15 RVKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEALAK   58 (177)
T ss_dssp             CCCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHH
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhhHHHHHHH
Confidence            578999999996 789999999998777 89999998776655443

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=94.89  E-value=0.017  Score=44.22  Aligned_cols=42  Identities=19%  Similarity=0.169  Sum_probs=36.1

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhh
Q 021960           31 GKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLAS   73 (305)
Q Consensus        31 ~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~   73 (305)
                      .|++.|.|+ |.+|.++|..|+++|++|.+.+|++...+.+.+
T Consensus         1 sk~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~   42 (184)
T d1bg6a2           1 SKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQD   42 (184)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             CCEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence            378999997 899999999999999999999998776665543

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=94.87  E-value=0.12  Score=39.61  Aligned_cols=44  Identities=20%  Similarity=0.216  Sum_probs=36.2

Q ss_pred             CCCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhh
Q 021960           25 SHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGS   69 (305)
Q Consensus        25 ~~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~   69 (305)
                      ..+.-++|.|+|.|| |--|.+.|..|+++|++|.++.++....-
T Consensus        37 ~~~~~~~k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~~~~GG   80 (179)
T d1ps9a3          37 ILPAVQKKNLAVVGA-GPAGLAFAINAAARGHQVTLFDAHSEIGG   80 (179)
T ss_dssp             CCSCSSCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSSSCT
T ss_pred             cCCCCCCcEEEEECc-cHHHHHHHHHHHhhccceEEEeccCccCc
Confidence            344556899999997 67899999999999999999998765543

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.87  E-value=0.011  Score=44.11  Aligned_cols=35  Identities=20%  Similarity=0.403  Sum_probs=31.9

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEec
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADV   63 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r   63 (305)
                      .++||.+||+|| |.+|..-++.|++.|++|.+++.
T Consensus        10 ~l~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap   44 (150)
T d1kyqa1          10 QLKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSP   44 (150)
T ss_dssp             CCTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEE
T ss_pred             eeCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeC
Confidence            678999999998 67999999999999999998854

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=94.85  E-value=0.023  Score=42.43  Aligned_cols=53  Identities=15%  Similarity=0.078  Sum_probs=37.1

Q ss_pred             cceeeeccCCCCCCCCCCCCEEEEe-cCCCchHHHHHHHHHHcCCeEEEEecCcc
Q 021960           13 GIHVLAWDDAPPSHRRLEGKVAIIT-GGARGIGEAAVRLFARHGAKVVIADVEDT   66 (305)
Q Consensus        13 ~~~~~~~~~~~~~~~~l~~k~vlVt-Gas~giG~~ia~~l~~~g~~vv~~~r~~~   66 (305)
                      ..|.++..+.-... ...++.++|. .+++.||.++|..|+++|.+|.++.+.+.
T Consensus        22 ~~~v~t~~d~l~~~-~~~~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~~   75 (156)
T d1djqa2          22 LPDQLTPEQVMDGK-KKIGKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVHL   75 (156)
T ss_dssp             STTEECHHHHHHTC-SCCCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSCT
T ss_pred             CCEEECHHHHhcCc-cccCCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCCc
Confidence            45777655442222 2235555554 45689999999999999999999988754

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=94.82  E-value=0.3  Score=35.64  Aligned_cols=36  Identities=17%  Similarity=0.295  Sum_probs=29.5

Q ss_pred             CEEEEecCCCchHHHHHHHHHHcCC--eEEEEecCcchh
Q 021960           32 KVAIITGGARGIGEAAVRLFARHGA--KVVIADVEDTLG   68 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~g~--~vv~~~r~~~~~   68 (305)
                      .++.|+|+ |.+|.++|..++.+|.  .+++.++++...
T Consensus         2 ~Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~   39 (143)
T d1llda1           2 TKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERV   39 (143)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccc
Confidence            35677797 9999999999999886  699999876543

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=94.81  E-value=0.03  Score=41.79  Aligned_cols=36  Identities=19%  Similarity=0.343  Sum_probs=28.6

Q ss_pred             CEEEEecCCCchHHHHHHHHHHcCC-eEEEEecCcchh
Q 021960           32 KVAIITGGARGIGEAAVRLFARHGA-KVVIADVEDTLG   68 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~g~-~vv~~~r~~~~~   68 (305)
                      .++-|.|+ |.+|.+++..|+..+. +++++++++...
T Consensus         4 ~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~   40 (150)
T d1t2da1           4 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMP   40 (150)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHH
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcc
Confidence            36778895 9999999988888775 688899876553

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=94.69  E-value=0.13  Score=37.39  Aligned_cols=76  Identities=14%  Similarity=0.189  Sum_probs=50.6

Q ss_pred             EEEEecCCCchHHHHHHHHHHc-CCeEEE-EecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEE
Q 021960           33 VAIITGGARGIGEAAVRLFARH-GAKVVI-ADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDIL  110 (305)
Q Consensus        33 ~vlVtGas~giG~~ia~~l~~~-g~~vv~-~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~l  110 (305)
                      ++.|.|++|..|+.+++...+. ++.++. +++.+.......   .+.+   +.+|++.++.+.+.++...+.  ++-.|
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~~~~~~~~---~~~D---vvIDFS~p~~~~~~~~~~~~~--~~~~V   72 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDPLSLLTD---GNTE---VVIDFTHPDVVMGNLEFLIDN--GIHAV   72 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTCCTHHHHT---TTCS---EEEECCCTTTHHHHHHHHHHT--TCEEE
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCchhhhcc---ccCC---EEEEcccHHHHHHHHHHHHhc--CCCEE
Confidence            4789999999999999987764 566543 455433222111   1222   557999999999988877655  35567


Q ss_pred             EEcCCC
Q 021960          111 YNNAGV  116 (305)
Q Consensus       111 i~nag~  116 (305)
                      |-.-|.
T Consensus        73 iGTTG~   78 (135)
T d1yl7a1          73 VGTTGF   78 (135)
T ss_dssp             ECCCCC
T ss_pred             Eecccc
Confidence            755553

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=94.67  E-value=0.45  Score=34.50  Aligned_cols=108  Identities=18%  Similarity=0.127  Sum_probs=60.2

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCC--eEEEEecCcchhhhHhhhc-----CCCCeEEEEecCCCHHHHHHHHHHHHHhcC
Q 021960           33 VAIITGGARGIGEAAVRLFARHGA--KVVIADVEDTLGSVLASTL-----APAPVTFVHCDVSLEEDIENLINSTVSRYG  105 (305)
Q Consensus        33 ~vlVtGas~giG~~ia~~l~~~g~--~vv~~~r~~~~~~~~~~~~-----~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g  105 (305)
                      ++.|.|+ |.+|.+++..++.++.  .+++.++++.........+     ..........   |.+++           .
T Consensus         2 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~---~~~~~-----------~   66 (140)
T d1a5za1           2 KIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAG---DYADL-----------K   66 (140)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEEC---CGGGG-----------T
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCC---cHHHh-----------c
Confidence            4667796 8999999999998874  6999998765533222111     0112333322   22221           2


Q ss_pred             CccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcC-CCCEEEEecc
Q 021960          106 RLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINR-GGGCIISTAS  169 (305)
Q Consensus       106 ~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~isS  169 (305)
                      .-|++|.+||....       ...+..+   .+..|..    +++.+.+.+.+. +.+.++++|-
T Consensus        67 ~adivvitag~~~~-------~g~~r~d---l~~~N~~----I~~~i~~~i~~~~p~aivivvtN  117 (140)
T d1a5za1          67 GSDVVIVAAGVPQK-------PGETRLQ---LLGRNAR----VMKEIARNVSKYAPDSIVIVVTN  117 (140)
T ss_dssp             TCSEEEECCCCCCC-------SSCCHHH---HHHHHHH----HHHHHHHHHHHHCTTCEEEECSS
T ss_pred             CCCEEEEecccccC-------CCcchhh---hhccccc----hHHHHHHHHHhcCCCcEEEEeCC
Confidence            57999999987432       1123322   3344543    344455555443 4556666553

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.46  E-value=0.022  Score=44.34  Aligned_cols=39  Identities=23%  Similarity=0.339  Sum_probs=34.0

Q ss_pred             CEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhH
Q 021960           32 KVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVL   71 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~   71 (305)
                      |+|.|.|+ |-+|..+|..|+..|++|++.+++++..+..
T Consensus         5 kkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a   43 (192)
T d1f0ya2           5 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKS   43 (192)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             EEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHHHH
Confidence            68899997 8899999999999999999999987655443

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=94.40  E-value=0.1  Score=39.32  Aligned_cols=77  Identities=26%  Similarity=0.306  Sum_probs=57.9

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDI  109 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~  109 (305)
                      ..-+|+|.|+ |-.|++.+......|+.|.+++.+.+..+.++...... +.+   -.++.+.+++.++       .-|+
T Consensus        31 ~pa~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~~-~~~---~~~~~~~l~~~~~-------~aDi   98 (168)
T d1pjca1          31 KPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSR-VEL---LYSNSAEIETAVA-------EADL   98 (168)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGG-SEE---EECCHHHHHHHHH-------TCSE
T ss_pred             CCcEEEEECC-ChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhccc-cee---ehhhhhhHHHhhc-------cCcE
Confidence            4678999997 68899999999999999999999988887776654332 333   3456666665554       5799


Q ss_pred             EEEcCCCCC
Q 021960          110 LYNNAGVLG  118 (305)
Q Consensus       110 li~nag~~~  118 (305)
                      ||.++=..+
T Consensus        99 vI~aalipG  107 (168)
T d1pjca1          99 LIGAVLVPG  107 (168)
T ss_dssp             EEECCCCTT
T ss_pred             EEEeeecCC
Confidence            998886543

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=94.30  E-value=0.08  Score=39.60  Aligned_cols=81  Identities=10%  Similarity=0.098  Sum_probs=52.1

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcC---------CCCeEEEEecCCCHHHHHHHH---HHH
Q 021960           33 VAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLA---------PAPVTFVHCDVSLEEDIENLI---NST  100 (305)
Q Consensus        33 ~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~---------~~~v~~~~~D~~d~~~i~~~~---~~~  100 (305)
                      ++-|.| .|-+|..+|+.|++.|++|++.+|+....+.+.+...         -.+..++.+=+.+.++++.++   +.+
T Consensus         2 kIgiIG-lG~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~d~ii~~v~~~~~v~~v~~~~~~~   80 (161)
T d1vpda2           2 KVGFIG-LGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENGI   80 (161)
T ss_dssp             EEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCH
T ss_pred             EEEEEe-hhHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHHhhhhhcccHHHHHhCCCeEEEEcCCHHHHHHHHhCCcch
Confidence            356666 5899999999999999999999998776665543220         001233444567788888876   234


Q ss_pred             HHhcCCccEEEEcC
Q 021960          101 VSRYGRLDILYNNA  114 (305)
Q Consensus       101 ~~~~g~id~li~na  114 (305)
                      .....+=+++|.+.
T Consensus        81 ~~~~~~g~iiid~s   94 (161)
T d1vpda2          81 IEGAKPGTVLIDMS   94 (161)
T ss_dssp             HHHCCTTCEEEECS
T ss_pred             hhccCCCCEEEECC
Confidence            33333334555543

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=94.24  E-value=0.066  Score=41.35  Aligned_cols=63  Identities=19%  Similarity=0.150  Sum_probs=45.5

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhH-----------hhhcCCCCeEEEEecCCC
Q 021960           26 HRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVL-----------ASTLAPAPVTFVHCDVSL   89 (305)
Q Consensus        26 ~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~-----------~~~~~~~~v~~~~~D~~d   89 (305)
                      ..++.++++.|.|. |.||+++++.|...|++|+..++........           .+.+...++..+.+.+++
T Consensus        39 ~~~l~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~~~~~l~~~l~~sD~v~~~~plt~  112 (188)
T d2naca1          39 AYDLEAMHVGTVAA-GRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKELNLTWHATREDMYPVCDVVTLNCPLHP  112 (188)
T ss_dssp             CCCCTTCEEEEECC-SHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHHHTCEECSSHHHHGGGCSEEEECSCCCT
T ss_pred             ceeccccceeeccc-cccchhhhhhhhccCceEEEEeeccccccccccccccccCCHHHHHHhccchhhcccccc
Confidence            34788999999995 7999999999999999999998754322221           222234557677777764

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=94.17  E-value=0.032  Score=40.21  Aligned_cols=70  Identities=17%  Similarity=0.233  Sum_probs=48.7

Q ss_pred             CEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEEE
Q 021960           32 KVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILY  111 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~li  111 (305)
                      |.++|.|. |.+|..+++.|.  |..+++++.++...+....    ..+.++..|.+|++.++++      ...+-+.+|
T Consensus         1 kHivI~G~-g~~g~~l~~~L~--~~~i~vi~~d~~~~~~~~~----~~~~~i~Gd~~~~~~L~~a------~i~~A~~vi   67 (129)
T d2fy8a1           1 RHVVICGW-SESTLECLRELR--GSEVFVLAEDENVRKKVLR----SGANFVHGDPTRVSDLEKA------NVRGARAVI   67 (129)
T ss_dssp             CCEEEESC-CHHHHHHHHTSC--GGGEEEEESCTTHHHHHHH----TTCEEEESCTTSHHHHHHT------TCTTCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHc--CCCCEEEEcchHHHHHHHh----cCccccccccCCHHHHHHh------hhhcCcEEE
Confidence            46788885 789999999994  4567777777766554432    2378899999998666653      113466777


Q ss_pred             EcC
Q 021960          112 NNA  114 (305)
Q Consensus       112 ~na  114 (305)
                      .+.
T Consensus        68 ~~~   70 (129)
T d2fy8a1          68 VNL   70 (129)
T ss_dssp             ECC
T ss_pred             Eec
Confidence            643

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=94.15  E-value=0.25  Score=36.04  Aligned_cols=35  Identities=11%  Similarity=0.197  Sum_probs=28.5

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCC--eEEEEecCcchh
Q 021960           33 VAIITGGARGIGEAAVRLFARHGA--KVVIADVEDTLG   68 (305)
Q Consensus        33 ~vlVtGas~giG~~ia~~l~~~g~--~vv~~~r~~~~~   68 (305)
                      ++.|.|+ |.+|.++|..++.+|.  .++++++++...
T Consensus         2 KI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~   38 (142)
T d1ojua1           2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLA   38 (142)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHH
T ss_pred             EEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchh
Confidence            5677796 9999999999998875  599999876553

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.90  E-value=0.042  Score=41.40  Aligned_cols=40  Identities=25%  Similarity=0.567  Sum_probs=35.2

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcc
Q 021960           26 HRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDT   66 (305)
Q Consensus        26 ~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~   66 (305)
                      ...+.||+++|.| .|-||+.+|+.|...|++|++++.++-
T Consensus        19 ~~~l~Gk~v~V~G-yG~iG~g~A~~~rg~G~~V~v~e~dp~   58 (163)
T d1li4a1          19 DVMIAGKVAVVAG-YGDVGKGCAQALRGFGARVIITEIDPI   58 (163)
T ss_dssp             CCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred             CceecCCEEEEec-cccccHHHHHHHHhCCCeeEeeecccc
Confidence            3467899999999 679999999999999999999988753

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=93.84  E-value=0.018  Score=46.28  Aligned_cols=46  Identities=26%  Similarity=0.393  Sum_probs=38.0

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHh
Q 021960           26 HRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLA   72 (305)
Q Consensus        26 ~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~   72 (305)
                      ..+++|++++|-| .|.+|..+|+.|.+.|++|++.+.+........
T Consensus        34 ~~~l~g~~v~IqG-~GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~   79 (230)
T d1leha1          34 SDSLEGLAVSVQG-LGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAV   79 (230)
T ss_dssp             SCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             CCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEeecccHHHHHHHH
Confidence            3468999999998 589999999999999999999887765544443

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=93.76  E-value=0.16  Score=37.86  Aligned_cols=67  Identities=15%  Similarity=0.122  Sum_probs=46.1

Q ss_pred             CEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcC---------CCCeEEEEecCCCHHHHHHHHHH
Q 021960           32 KVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLA---------PAPVTFVHCDVSLEEDIENLINS   99 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~---------~~~v~~~~~D~~d~~~i~~~~~~   99 (305)
                      ++|-|.| .|-+|.++|+.|+++|+.|.+.+|+....+.+.....         ......+..-+.+.+.++.++..
T Consensus         2 ~kIg~IG-lG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~diii~~v~~~~~~~~v~~~   77 (162)
T d3cuma2           2 KQIAFIG-LGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLD   77 (162)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTSCSEEEECCSCHHHHHHHHHS
T ss_pred             CEEEEEE-EHHHHHHHHHHHHHCCCeEEEEECchhhhhhhhhhhccccchhhhhccccCeeeecccchhhHHHHHhc
Confidence            3566776 6899999999999999999999998766554432210         01123444557777777777654

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=93.67  E-value=0.38  Score=35.80  Aligned_cols=38  Identities=16%  Similarity=0.212  Sum_probs=30.8

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHcCC--eEEEEecCcch
Q 021960           29 LEGKVAIITGGARGIGEAAVRLFARHGA--KVVIADVEDTL   67 (305)
Q Consensus        29 l~~k~vlVtGas~giG~~ia~~l~~~g~--~vv~~~r~~~~   67 (305)
                      ++..++.|+|+ |.+|..+|..|+.+|.  .++++++++..
T Consensus        17 ~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~   56 (159)
T d2ldxa1          17 LSRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDK   56 (159)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHH
T ss_pred             CCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchh
Confidence            44557888896 9999999999999875  69999987644

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=93.54  E-value=0.057  Score=38.10  Aligned_cols=35  Identities=29%  Similarity=0.372  Sum_probs=31.3

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcc
Q 021960           31 GKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDT   66 (305)
Q Consensus        31 ~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~   66 (305)
                      .|.++|.|| |-+|..+|..|++.|.+|.++.|.+.
T Consensus        22 p~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~   56 (117)
T d1ebda2          22 PKSLVVIGG-GYIGIELGTAYANFGTKVTILEGAGE   56 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCeEEEECC-CccceeeeeeecccccEEEEEEecce
Confidence            478999996 79999999999999999999988764

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=93.53  E-value=0.057  Score=38.56  Aligned_cols=36  Identities=33%  Similarity=0.483  Sum_probs=31.5

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcc
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDT   66 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~   66 (305)
                      ++|.++|.|| |.+|..+|..|++.|.+|.++.+.+.
T Consensus        29 ~~k~vvViGg-G~iG~E~A~~l~~~g~~Vtlie~~~~   64 (123)
T d1nhpa2          29 EVNNVVVIGS-GYIGIEAAEAFAKAGKKVTVIDILDR   64 (123)
T ss_dssp             TCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCCEEEEECC-hHHHHHHHHHhhccceEEEEEEecCc
Confidence            4678899986 79999999999999999999987653

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.51  E-value=0.085  Score=40.02  Aligned_cols=42  Identities=17%  Similarity=0.265  Sum_probs=37.1

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchh
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLG   68 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~   68 (305)
                      .+++||.++|.|-|.=+|+.++..|+++|++|.++.......
T Consensus        35 i~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~l   76 (170)
T d1a4ia1          35 VPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHL   76 (170)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSH
T ss_pred             cccccceEEEEecCCccchHHHHHHHhccCceEEEecccccH
Confidence            367999999999999999999999999999999987765443

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=93.35  E-value=0.086  Score=39.76  Aligned_cols=40  Identities=13%  Similarity=0.118  Sum_probs=35.8

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcc
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDT   66 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~   66 (305)
                      .++.||.++|.|-|.=+|+.++..|.++|++|.++.+...
T Consensus        33 i~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~   72 (166)
T d1b0aa1          33 IDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTK   72 (166)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCS
T ss_pred             cccccceEEEEeccccccHHHHHHHHHhhccccccccccc
Confidence            3678999999999999999999999999999998866554

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=93.31  E-value=0.47  Score=35.19  Aligned_cols=82  Identities=13%  Similarity=0.049  Sum_probs=51.8

Q ss_pred             CEEEEecCCCchHHHHHHHHHHcCC--eEEEEecCcchhhhHhhhcCC------------CCeEEEEecCCCHHHHHHHH
Q 021960           32 KVAIITGGARGIGEAAVRLFARHGA--KVVIADVEDTLGSVLASTLAP------------APVTFVHCDVSLEEDIENLI   97 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~g~--~vv~~~r~~~~~~~~~~~~~~------------~~v~~~~~D~~d~~~i~~~~   97 (305)
                      |+++|.|. |-+|.++|+.|.+.|+  +|+..+++.+..+...+...-            ....++.+ ..-.+++.+++
T Consensus         2 k~I~IIG~-G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~dlIil-a~p~~~~~~vl   79 (171)
T d2g5ca2           2 QNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVML-SSPVRTFREIA   79 (171)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEE-CSCHHHHHHHH
T ss_pred             CEEEEEcc-CHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhcchhhhhhhhhhhccccccccc-cCCchhhhhhh
Confidence            46888885 8999999999999996  577788877665544332110            01112222 22467788888


Q ss_pred             HHHHHhcCCccEEEEcCC
Q 021960           98 NSTVSRYGRLDILYNNAG  115 (305)
Q Consensus        98 ~~~~~~~g~id~li~nag  115 (305)
                      +++.....+=.+++...+
T Consensus        80 ~~l~~~~~~~~ii~d~~s   97 (171)
T d2g5ca2          80 KKLSYILSEDATVTDQGS   97 (171)
T ss_dssp             HHHHHHSCTTCEEEECCS
T ss_pred             hhhhcccccccccccccc
Confidence            887766543345555444

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=93.30  E-value=0.066  Score=38.16  Aligned_cols=36  Identities=19%  Similarity=0.262  Sum_probs=31.8

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcc
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDT   66 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~   66 (305)
                      .++.++|.|| |.+|..+|..|+++|.+|.++.+.+.
T Consensus        29 ~~~~vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~~~~   64 (121)
T d1d7ya2          29 PQSRLLIVGG-GVIGLELAATARTAGVHVSLVETQPR   64 (121)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             cCCeEEEECc-chhHHHHHHHhhcccceEEEEeeccc
Confidence            3688999986 79999999999999999999988764

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=93.02  E-value=0.035  Score=42.93  Aligned_cols=38  Identities=18%  Similarity=0.229  Sum_probs=33.0

Q ss_pred             CEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhh
Q 021960           32 KVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSV   70 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~   70 (305)
                      |+|.|.|+ |-+|..+|..|+..|++|++.+++++..+.
T Consensus         5 ~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~   42 (186)
T d1wdka3           5 KQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGIEQ   42 (186)
T ss_dssp             SSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHHHH
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHHhh
Confidence            56889997 889999999999999999999998765443

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=92.77  E-value=0.087  Score=37.31  Aligned_cols=36  Identities=25%  Similarity=0.262  Sum_probs=31.5

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcc
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDT   66 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~   66 (305)
                      ..+.++|.|| |-||..+|..|++.|.+|.++.+.+.
T Consensus        21 ~p~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~~~   56 (119)
T d3lada2          21 VPGKLGVIGA-GVIGLELGSVWARLGAEVTVLEAMDK   56 (119)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCCeEEEECC-ChHHHHHHHHHHHcCCceEEEEeecc
Confidence            3578999996 79999999999999999999987654

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=92.70  E-value=0.078  Score=37.51  Aligned_cols=35  Identities=20%  Similarity=0.168  Sum_probs=31.2

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcc
Q 021960           31 GKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDT   66 (305)
Q Consensus        31 ~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~   66 (305)
                      .|.++|.|| |-+|..+|..|++.|.+|.++.|.+.
T Consensus        22 p~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~~   56 (117)
T d1onfa2          22 SKKIGIVGS-GYIAVELINVIKRLGIDSYIFARGNR   56 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSSS
T ss_pred             CCEEEEECC-chHHHHHHHHHHhccccceeeehhcc
Confidence            578999996 79999999999999999999988753

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=92.68  E-value=0.055  Score=43.77  Aligned_cols=34  Identities=26%  Similarity=0.309  Sum_probs=29.7

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCc
Q 021960           31 GKVAIITGGARGIGEAAVRLFARHGAKVVIADVED   65 (305)
Q Consensus        31 ~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~   65 (305)
                      +|.|+|.|| |--|...|..|+++|++|+++.+++
T Consensus         1 ~KkV~IIGa-G~aGL~aA~~La~~G~~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVIGA-GVSGLAAAYKLKIHGLNVTVFEAEG   34 (373)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTSCEEEEECSSS
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            588999997 5679999999999999999997654

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=92.66  E-value=0.35  Score=36.83  Aligned_cols=44  Identities=23%  Similarity=0.160  Sum_probs=37.5

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc
Q 021960           31 GKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL   75 (305)
Q Consensus        31 ~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~   75 (305)
                      .-.|+|.|| |-.|++.++-....|+.|.+++.+....+.+....
T Consensus        29 pa~VvViGa-GvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~l~   72 (183)
T d1l7da1          29 PARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVESLG   72 (183)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTT
T ss_pred             CcEEEEEcC-cHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhh
Confidence            458899997 68899999999999999999999988887776543

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.60  E-value=0.087  Score=37.64  Aligned_cols=35  Identities=17%  Similarity=0.206  Sum_probs=31.0

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcc
Q 021960           31 GKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDT   66 (305)
Q Consensus        31 ~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~   66 (305)
                      .|.++|.|| |.||..+|..|++.|.+|.++.|++.
T Consensus        22 pk~vvIvGg-G~iG~E~A~~l~~~G~~Vtlv~~~~~   56 (125)
T d3grsa2          22 PGRSVIVGA-GYIAVEMAGILSALGSKTSLMIRHDK   56 (125)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCEEEEEcC-CccHHHHHHHHhcCCcEEEEEeeccc
Confidence            478899996 68999999999999999999988753

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=92.39  E-value=0.06  Score=41.10  Aligned_cols=37  Identities=16%  Similarity=0.285  Sum_probs=31.3

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHcCCe-EEEEecCcchh
Q 021960           31 GKVAIITGGARGIGEAAVRLFARHGAK-VVIADVEDTLG   68 (305)
Q Consensus        31 ~k~vlVtGas~giG~~ia~~l~~~g~~-vv~~~r~~~~~   68 (305)
                      +|.|+|.|| |-.|...|..|+++|++ |.++.+++...
T Consensus         4 ~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~~~g   41 (196)
T d1gtea4           4 SAKIALLGA-GPASISCASFLARLGYSDITIFEKQEYVG   41 (196)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSSSCS
T ss_pred             CCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecCccc
Confidence            678999997 78999999999999995 88888765543

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=92.38  E-value=0.099  Score=36.78  Aligned_cols=35  Identities=20%  Similarity=0.205  Sum_probs=30.6

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcc
Q 021960           31 GKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDT   66 (305)
Q Consensus        31 ~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~   66 (305)
                      .|.++|.|| |-+|..+|..|++.|.+|.++.|.+.
T Consensus        21 p~~vvIiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~   55 (116)
T d1gesa2          21 PERVAVVGA-GYIGVELGGVINGLGAKTHLFEMFDA   55 (116)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCEEEEECC-ChhhHHHHHHhhccccEEEEEeecch
Confidence            367888886 79999999999999999999988754

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=92.19  E-value=0.11  Score=41.18  Aligned_cols=35  Identities=26%  Similarity=0.322  Sum_probs=30.7

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCc
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVED   65 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~   65 (305)
                      +.|.|+|.|| |-.|...|..|+++|++|.+++|..
T Consensus         5 ~~~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~~   39 (268)
T d1c0pa1           5 SQKRVVVLGS-GVIGLSSALILARKGYSVHILARDL   39 (268)
T ss_dssp             CSCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CCCcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            3467999997 6889999999999999999998864

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=92.14  E-value=0.091  Score=37.34  Aligned_cols=34  Identities=29%  Similarity=0.265  Sum_probs=30.3

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCc
Q 021960           31 GKVAIITGGARGIGEAAVRLFARHGAKVVIADVED   65 (305)
Q Consensus        31 ~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~   65 (305)
                      ++.++|.|| |.+|..+|..|++.|.+|.++.+.+
T Consensus        32 ~~~vvIiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~   65 (122)
T d1xhca2          32 SGEAIIIGG-GFIGLELAGNLAEAGYHVKLIHRGA   65 (122)
T ss_dssp             HSEEEEEEC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCcEEEECC-cHHHHHHHHHhhcccceEEEEeccc
Confidence            478899886 7999999999999999999998764

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=91.99  E-value=0.4  Score=36.02  Aligned_cols=79  Identities=16%  Similarity=0.109  Sum_probs=50.1

Q ss_pred             EEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCC--------------------CeEEEEecCCCHHHH
Q 021960           34 AIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPA--------------------PVTFVHCDVSLEEDI   93 (305)
Q Consensus        34 vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~--------------------~v~~~~~D~~d~~~i   93 (305)
                      +-|.| .|-+|.++++.|++.|++|.+.+|+.++.+.+.+.....                    ....+..-+.+...+
T Consensus         4 IGvIG-lG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (178)
T d1pgja2           4 VGVVG-LGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALILVQAGAAT   82 (178)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEECCCCSHHH
T ss_pred             EEEEe-ehHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccccchhhhhhhhHHHHhcccceEEEEeecCcchh
Confidence            45555 689999999999999999999999887766654432110                    112233334455566


Q ss_pred             HHHHHHHHHhcCCccEEEEc
Q 021960           94 ENLINSTVSRYGRLDILYNN  113 (305)
Q Consensus        94 ~~~~~~~~~~~g~id~li~n  113 (305)
                      +..+..+.....+=+++|..
T Consensus        83 ~~~~~~~~~~~~~~~iii~~  102 (178)
T d1pgja2          83 DSTIEQLKKVFEKGDILVDT  102 (178)
T ss_dssp             HHHHHHHHHHCCTTCEEEEC
T ss_pred             hhhhhhhhhhccccceeccc
Confidence            66666655554433455543

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=91.98  E-value=0.11  Score=36.85  Aligned_cols=35  Identities=29%  Similarity=0.426  Sum_probs=30.8

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcc
Q 021960           31 GKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDT   66 (305)
Q Consensus        31 ~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~   66 (305)
                      .|.++|.|| |-||..+|..|++.|.+|.++.+.+.
T Consensus        23 p~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~~   57 (122)
T d1v59a2          23 PKRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQPQ   57 (122)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCeEEEECC-CchHHHHHHHHHhhCcceeEEEeccc
Confidence            478899996 79999999999999999999988653

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=91.95  E-value=0.078  Score=42.65  Aligned_cols=36  Identities=28%  Similarity=0.473  Sum_probs=30.5

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCC-eEEEEecC
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGA-KVVIADVE   64 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~-~vv~~~r~   64 (305)
                      .+++++|+|.|+ ||+|..++..|+..|. ++.++|.+
T Consensus        27 kL~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D   63 (247)
T d1jw9b_          27 ALKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFD   63 (247)
T ss_dssp             HHHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred             HHhCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCc
Confidence            456789999995 8999999999999998 57777654

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=91.92  E-value=0.11  Score=36.46  Aligned_cols=35  Identities=20%  Similarity=0.362  Sum_probs=30.5

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcc
Q 021960           31 GKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDT   66 (305)
Q Consensus        31 ~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~   66 (305)
                      .+.++|.|| |-+|..+|..|++.|.+|.++.+.+.
T Consensus        21 p~~vvIiGg-G~~G~E~A~~l~~~g~~Vtlve~~~~   55 (115)
T d1lvla2          21 PQHLVVVGG-GYIGLELGIAYRKLGAQVSVVEARER   55 (115)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCeEEEECC-CHHHHHHHHHHhhcccceEEEeeecc
Confidence            478888886 79999999999999999999987653

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=91.54  E-value=1.9  Score=32.79  Aligned_cols=39  Identities=21%  Similarity=0.234  Sum_probs=32.1

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHh
Q 021960           33 VAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLA   72 (305)
Q Consensus        33 ~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~   72 (305)
                      .+.|.| .|-+|..+|..|++.|++|+..+.++...+.+.
T Consensus         2 kI~ViG-lG~vGl~~a~~la~~g~~V~g~D~n~~~i~~ln   40 (202)
T d1mv8a2           2 RISIFG-LGYVGAVCAGCLSARGHEVIGVDVSSTKIDLIN   40 (202)
T ss_dssp             EEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             EEEEEC-CCHhHHHHHHHHHhCCCcEEEEeCCHHHHHHhc
Confidence            356675 689999999999999999999998876655544

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=91.45  E-value=0.16  Score=39.49  Aligned_cols=72  Identities=24%  Similarity=0.218  Sum_probs=51.8

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCC-eEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcC
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGA-KVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYG  105 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~-~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g  105 (305)
                      .++.||+||=.|+++|+   ++..++..|+ +|+.++.++...+.+.+..  .++.++.+|+.+.             .+
T Consensus        45 ~dl~Gk~VLDlGcGtG~---l~i~a~~~ga~~V~~vDid~~a~~~ar~N~--~~~~~~~~D~~~l-------------~~  106 (197)
T d1ne2a_          45 GNIGGRSVIDAGTGNGI---LACGSYLLGAESVTAFDIDPDAIETAKRNC--GGVNFMVADVSEI-------------SG  106 (197)
T ss_dssp             TSSBTSEEEEETCTTCH---HHHHHHHTTBSEEEEEESCHHHHHHHHHHC--TTSEEEECCGGGC-------------CC
T ss_pred             CCCCCCEEEEeCCCCcH---HHHHHHHcCCCcccccccCHHHHHHHHHcc--ccccEEEEehhhc-------------CC
Confidence            46789999999988773   3345677776 5999998877666555443  3478888988532             25


Q ss_pred             CccEEEEcCCC
Q 021960          106 RLDILYNNAGV  116 (305)
Q Consensus       106 ~id~li~nag~  116 (305)
                      ++|+||.|.-+
T Consensus       107 ~fD~Vi~NPPf  117 (197)
T d1ne2a_         107 KYDTWIMNPPF  117 (197)
T ss_dssp             CEEEEEECCCC
T ss_pred             cceEEEeCccc
Confidence            79999999754

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=91.38  E-value=0.14  Score=36.88  Aligned_cols=36  Identities=17%  Similarity=0.242  Sum_probs=31.9

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcc
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDT   66 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~   66 (305)
                      ++|.++|.|| |-+|..+|..|++.|.+|.++.+.+.
T Consensus        34 ~~k~v~VIGg-G~iG~E~A~~l~~~g~~Vtvie~~~~   69 (133)
T d1q1ra2          34 ADNRLVVIGG-GYIGLEVAATAIKANMHVTLLDTAAR   69 (133)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             cCCEEEEECC-chHHHHHHHHHHhhCcceeeeeeccc
Confidence            4688999986 79999999999999999999988754

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=91.37  E-value=0.11  Score=36.90  Aligned_cols=35  Identities=20%  Similarity=0.355  Sum_probs=31.3

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcc
Q 021960           31 GKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDT   66 (305)
Q Consensus        31 ~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~   66 (305)
                      .|.++|.|| |-||..+|..|++.|.+|.++.|.+.
T Consensus        25 p~~~viiG~-G~iglE~A~~~~~~G~~Vtvi~~~~~   59 (123)
T d1dxla2          25 PKKLVVIGA-GYIGLEMGSVWGRIGSEVTVVEFASE   59 (123)
T ss_dssp             CSEEEESCC-SHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCeEEEEcc-chHHHHHHHHHHhcCCeEEEEEEccc
Confidence            578899996 79999999999999999999988754

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=91.26  E-value=0.93  Score=32.69  Aligned_cols=84  Identities=8%  Similarity=0.086  Sum_probs=56.2

Q ss_pred             CCCEEEEecCC---CchHHHHHHHHHHcCCeEEEEecCcchhhhH--h---hhcCCCCeEEEEecCCCHHHHHHHHHHHH
Q 021960           30 EGKVAIITGGA---RGIGEAAVRLFARHGAKVVIADVEDTLGSVL--A---STLAPAPVTFVHCDVSLEEDIENLINSTV  101 (305)
Q Consensus        30 ~~k~vlVtGas---~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~--~---~~~~~~~v~~~~~D~~d~~~i~~~~~~~~  101 (305)
                      +.|++.|.|||   +..|..+++.|.+.|++|+.+..+.....-.  -   ..+ ...+..+.+ +...+.+.++++++.
T Consensus        18 ~~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~~i~G~~~~~sl~dl-p~~iD~v~i-~vp~~~~~~~~~e~~   95 (139)
T d2d59a1          18 RYKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEEVLGRKCYPSVLDI-PDKIEVVDL-FVKPKLTMEYVEQAI   95 (139)
T ss_dssp             HCCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGC-SSCCSEEEE-CSCHHHHHHHHHHHH
T ss_pred             cCCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCcccccCCCccccccccc-CccceEEEE-EeCHHHHHHHHHHHH
Confidence            46899999999   6799999999999999998885543211100  0   011 112323222 346788888888887


Q ss_pred             HhcCCccEEEEcCCCC
Q 021960          102 SRYGRLDILYNNAGVL  117 (305)
Q Consensus       102 ~~~g~id~li~nag~~  117 (305)
                      +.  .+..++...|..
T Consensus        96 ~~--g~k~v~~~~G~~  109 (139)
T d2d59a1          96 KK--GAKVVWFQYNTY  109 (139)
T ss_dssp             HH--TCSEEEECTTCC
T ss_pred             Hh--CCCEEEEecccc
Confidence            76  377888888753

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=91.20  E-value=0.16  Score=35.65  Aligned_cols=36  Identities=17%  Similarity=0.314  Sum_probs=31.6

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcc
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDT   66 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~   66 (305)
                      .+|.++|.|| |-+|..+|..|++.|.+|.++.+.+.
T Consensus        21 ~~~~vvVvGg-G~ig~E~A~~l~~~g~~vt~i~~~~~   56 (121)
T d1mo9a2          21 PGSTVVVVGG-SKTAVEYGCFFNATGRRTVMLVRTEP   56 (121)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcchhheEeeccch
Confidence            4789999986 79999999999999999999987653

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=90.97  E-value=0.1  Score=42.07  Aligned_cols=32  Identities=22%  Similarity=0.372  Sum_probs=28.6

Q ss_pred             EEEecCCCchHHHHHHHHHHcCCeEEEEecCcc
Q 021960           34 AIITGGARGIGEAAVRLFARHGAKVVIADVEDT   66 (305)
Q Consensus        34 vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~   66 (305)
                      |+|.|| |-.|.++|.+|+++|.+|+++++.+.
T Consensus         7 vvIIGa-Gi~Gls~A~~La~~G~~V~vlE~~~~   38 (276)
T d1ryia1           7 AVVIGG-GIIGSAIAYYLAKENKNTALFESGTM   38 (276)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSST
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            788886 78999999999999999999988653

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=90.96  E-value=0.48  Score=34.65  Aligned_cols=35  Identities=9%  Similarity=0.050  Sum_probs=25.7

Q ss_pred             CEEEEecCCCchHHHHHHHHHHcC-C---eEEEEecCcc
Q 021960           32 KVAIITGGARGIGEAAVRLFARHG-A---KVVIADVEDT   66 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~g-~---~vv~~~r~~~   66 (305)
                      |.|-|.||||-+|..+.+.|+++. +   +++.+.++..
T Consensus         2 kkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s   40 (146)
T d1t4ba1           2 QNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQL   40 (146)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSST
T ss_pred             cEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeecccc
Confidence            468899999999999998877653 2   4555555443

>d2fr1a2 c.2.1.2 (A:1448-1656) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=90.78  E-value=2.6  Score=32.02  Aligned_cols=155  Identities=13%  Similarity=0.077  Sum_probs=84.0

Q ss_pred             eeccCCCCCCC-CCCCCEEEEecCC--CchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHH
Q 021960           17 LAWDDAPPSHR-RLEGKVAIITGGA--RGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDI   93 (305)
Q Consensus        17 ~~~~~~~~~~~-~l~~k~vlVtGas--~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i   93 (305)
                      ..|...+.... ...+.+++|....  ..+..+++..|...|..++.+....                     -.+.+.+
T Consensus        10 ~~W~p~~~~~~~~~~g~~lv~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~---------------------~~~~~~l   68 (209)
T d2fr1a2          10 IEWRPTGAGEPARLDGTWLVAKYAGTADETSTAAREALESAGARVRELVVDA---------------------RCGRDEL   68 (209)
T ss_dssp             EEEEECCCCCCCCCCSEEEEEECTTSSHHHHHHHHHHHHTTSCEEEEEECCT---------------------TCCHHHH
T ss_pred             CcceECCCCCCCCCCCcEEEEeCCCCchHHHHHHHHHHHhCCCeEEEecCCC---------------------ccCHHHH
Confidence            44665544433 3456665555332  2366778888888888877553321                     1123222


Q ss_pred             HHHHHHHHHhcCCccEEEEcCCCCCCCCCCCcccCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCCEEEEecccccc
Q 021960           94 ENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGV  173 (305)
Q Consensus        94 ~~~~~~~~~~~g~id~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~  173 (305)
                      ..    .....+.++.|||..+......   .  ..+  ..    ...+...+.++|.+..   .....++.+++.....
T Consensus        69 ~~----~~~~~~~~~~vv~l~~~~~~~~---~--~~~--~~----~~~~~~~l~l~qal~~---~~~~~~l~~vT~~a~~  130 (209)
T d2fr1a2          69 AE----RLRSVGEVAGVLSLLAVDEAEP---E--EAP--LA----LASLADTLSLVQAMVS---AELGCPLWTVTESAVA  130 (209)
T ss_dssp             HH----HHTTSCCCSEEEECTTTTCCCC---S--SCG--GG----CHHHHHHHHHHHHHHH---TTCCCCEEEEEESCSC
T ss_pred             HH----HhhccCCCCeEEEeCCCCCCCC---c--chh--HH----HHHHHHHHHHHHHHHh---CCCCCcEEEEEcCCcc
Confidence            22    2334467899999876532211   1  111  00    1123444455665543   2334567776654432


Q ss_pred             cCCCCCccchhhHHHHHHHHHHHHHHHCcCCcEEEEEe
Q 021960          174 MGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCIS  211 (305)
Q Consensus       174 ~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~v~  211 (305)
                      .. .....-...++++-+|+|+++.|+....++...+.
T Consensus       131 ~~-~~d~~~~p~~A~l~Gl~r~~~~E~P~l~~~~vDl~  167 (209)
T d2fr1a2         131 TG-PFERVRNAAHGALWGVGRVIALENPAVWGGLVDVP  167 (209)
T ss_dssp             SS-TTSCCSCGGGHHHHHHHHHHHHHCGGGEEEEEEEC
T ss_pred             cC-CCcccCCHhHHhHHHHHHHHHHhCCCceEEEEECC
Confidence            22 22333456789999999999999865445555553

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=90.73  E-value=0.14  Score=36.30  Aligned_cols=33  Identities=12%  Similarity=0.160  Sum_probs=28.8

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHcCCeEEEEecC
Q 021960           31 GKVAIITGGARGIGEAAVRLFARHGAKVVIADVE   64 (305)
Q Consensus        31 ~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~   64 (305)
                      .+.++|.|| |-||..+|..|.+.|.+|.++.|+
T Consensus        20 P~~vvIIGg-G~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          20 PGKTLVVGA-SYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CCeEEEECC-CccHHHHHHHHhhcCCeEEEEEec
Confidence            457888886 799999999999999999998765

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=90.58  E-value=0.17  Score=36.05  Aligned_cols=35  Identities=20%  Similarity=0.339  Sum_probs=31.0

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCc
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVED   65 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~   65 (305)
                      ..+.++|.|| |-||..+|..|.+.|.+|.++.+.+
T Consensus        25 ~p~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~~   59 (125)
T d1ojta2          25 VPGKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMMD   59 (125)
T ss_dssp             CCSEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             cCCeEEEECC-CHHHHHHHHHhhcCCCEEEEEEeec
Confidence            3578999996 7999999999999999999997764

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=90.35  E-value=0.14  Score=41.87  Aligned_cols=36  Identities=22%  Similarity=0.350  Sum_probs=31.1

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcc
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDT   66 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~   66 (305)
                      +.|.|+|.|| |--|...|..|+++|++|+++.+++.
T Consensus        29 ~pkkV~IIGa-G~aGLsaA~~L~~~G~~V~vlE~~~~   64 (370)
T d2iida1          29 NPKHVVIVGA-GMAGLSAAYVLAGAGHQVTVLEASER   64 (370)
T ss_dssp             SCCEEEEECC-BHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            5689999997 56799999999999999999987653

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=89.99  E-value=0.19  Score=39.88  Aligned_cols=35  Identities=17%  Similarity=0.213  Sum_probs=30.1

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcc
Q 021960           31 GKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDT   66 (305)
Q Consensus        31 ~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~   66 (305)
                      .+.|+|.|| |--|..+|..|+++|++|+++.++..
T Consensus         4 ~~kV~IiGa-G~aGl~~A~~L~~~G~~v~v~Er~~~   38 (265)
T d2voua1           4 TDRIAVVGG-SISGLTAALMLRDAGVDVDVYERSPQ   38 (265)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCcEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            467999997 57799999999999999999987643

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=89.93  E-value=0.27  Score=38.70  Aligned_cols=38  Identities=21%  Similarity=0.385  Sum_probs=32.5

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcch
Q 021960           29 LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTL   67 (305)
Q Consensus        29 l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~   67 (305)
                      -.+|.|+|.|| |--|...|..|+++|++|.++.+++..
T Consensus        47 ~~~k~VvIIGa-GpAGl~aA~~l~~~G~~v~l~E~~~~~   84 (233)
T d1djqa3          47 KNKDSVLIVGA-GPSGSEAARVLMESGYTVHLTDTAEKI   84 (233)
T ss_dssp             SSCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSST
T ss_pred             cCCceEEEEcc-cHHHHHHHHHHHHhccceeeEeecccc
Confidence            46899999997 577999999999999999999766543

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=89.76  E-value=0.21  Score=36.70  Aligned_cols=42  Identities=19%  Similarity=0.266  Sum_probs=34.2

Q ss_pred             EEEEecCCCchHHHHHHHHHHcC-CeEEEEecCcchhhhHhhhc
Q 021960           33 VAIITGGARGIGEAAVRLFARHG-AKVVIADVEDTLGSVLASTL   75 (305)
Q Consensus        33 ~vlVtGas~giG~~ia~~l~~~g-~~vv~~~r~~~~~~~~~~~~   75 (305)
                      .+.+.|+ |-+|.++++.|.+.| ++|.+.+|+.++.+.+.+..
T Consensus         2 kI~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~   44 (152)
T d1yqga2           2 NVYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKEL   44 (152)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHT
T ss_pred             EEEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhc
Confidence            4667776 899999999999887 88999999987777666543

>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Dethiobiotin synthetase
species: Escherichia coli [TaxId: 562]

Probab=89.37  E-value=0.12  Score=39.98  Aligned_cols=31  Identities=19%  Similarity=0.227  Sum_probs=27.1

Q ss_pred             CEEEEecCCCchHH-----HHHHHHHHcCCeEEEEe
Q 021960           32 KVAIITGGARGIGE-----AAVRLFARHGAKVVIAD   62 (305)
Q Consensus        32 k~vlVtGas~giG~-----~ia~~l~~~g~~vv~~~   62 (305)
                      |.++|||.+.|+|+     .+|..|+++|++|.+++
T Consensus         2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id   37 (224)
T d1byia_           2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYK   37 (224)
T ss_dssp             EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred             ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEC
Confidence            68899998889999     56778999999999875

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=89.23  E-value=1.3  Score=31.34  Aligned_cols=77  Identities=16%  Similarity=0.149  Sum_probs=51.2

Q ss_pred             CCCEEEEecCCC-c---------hHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHH
Q 021960           30 EGKVAIITGGAR-G---------IGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINS   99 (305)
Q Consensus        30 ~~k~vlVtGas~-g---------iG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~   99 (305)
                      +-|+|||.|+.. .         -+.+.++.|.+.|++++++..+.+....-..  -.+++.   ++--..+++.++++.
T Consensus         6 ~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVstd~d--~aD~lY---fePlt~e~v~~Ii~~   80 (127)
T d1a9xa3           6 DIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTDPE--MADATY---IEPIHWEVVRKIIEK   80 (127)
T ss_dssp             SCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGCGG--GSSEEE---CSCCCHHHHHHHHHH
T ss_pred             CCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhcChh--hcceee---eecCCHHHHHHHHHH
Confidence            458899998742 2         2567888899999999999877654332111  122233   344567888887765


Q ss_pred             HHHhcCCccEEEEcCCC
Q 021960          100 TVSRYGRLDILYNNAGV  116 (305)
Q Consensus       100 ~~~~~g~id~li~nag~  116 (305)
                      -     ++|.++...|.
T Consensus        81 E-----~pd~il~~~GG   92 (127)
T d1a9xa3          81 E-----RPDAVLPTMGG   92 (127)
T ss_dssp             H-----CCSEEECSSSH
T ss_pred             h-----CcCCeEEEeee
Confidence            3     79999877663

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.16  E-value=0.13  Score=45.06  Aligned_cols=36  Identities=19%  Similarity=0.428  Sum_probs=30.0

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHcCC-eEEEEecCc
Q 021960           29 LEGKVAIITGGARGIGEAAVRLFARHGA-KVVIADVED   65 (305)
Q Consensus        29 l~~k~vlVtGas~giG~~ia~~l~~~g~-~vv~~~r~~   65 (305)
                      |++..|||.|+ ||||..+++.|+..|. ++.+++.+.
T Consensus        35 l~~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D~   71 (426)
T d1yovb1          35 LDTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDT   71 (426)
T ss_dssp             HHHCCEEEECS-STTHHHHHHHHHTTTCCCEEEECCCB
T ss_pred             HhcCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECCC
Confidence            34668999998 7899999999999998 688886643

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=89.14  E-value=0.18  Score=38.75  Aligned_cols=41  Identities=12%  Similarity=0.258  Sum_probs=34.5

Q ss_pred             CEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhh
Q 021960           32 KVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLAS   73 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~   73 (305)
                      +.+.|.|+ |..|.++|..|++.|++|.+.+|+++..+.+.+
T Consensus         8 ~KI~ViGa-G~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~~   48 (189)
T d1n1ea2           8 NKAVVFGS-GAFGTALAMVLSKKCREVCVWHMNEEEVRLVNE   48 (189)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHTTEEEEEEECSCHHHHHHHHH
T ss_pred             ceEEEECC-CHHHHHHHHHHHHcCCeEEEEEecHHHHHHHhh
Confidence            56889996 689999999999999999999998776665544

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=88.95  E-value=2.2  Score=28.44  Aligned_cols=71  Identities=14%  Similarity=0.172  Sum_probs=44.7

Q ss_pred             CCCEEEEecCCCchH-HHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 021960           30 EGKVAIITGGARGIG-EAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLD  108 (305)
Q Consensus        30 ~~k~vlVtGas~giG-~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id  108 (305)
                      ..|.+.+.|- +|+| .++|+.|.++|+.|...|+........... .+  +.+...+-  .+.+           ...|
T Consensus         7 ~~~~ihfiGi-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~~~~L~~-~G--i~v~~g~~--~~~i-----------~~~d   69 (96)
T d1p3da1           7 RVQQIHFIGI-GGAGMSGIAEILLNEGYQISGSDIADGVVTQRLAQ-AG--AKIYIGHA--EEHI-----------EGAS   69 (96)
T ss_dssp             TCCEEEEETT-TSTTHHHHHHHHHHHTCEEEEEESCCSHHHHHHHH-TT--CEEEESCC--GGGG-----------TTCS
T ss_pred             hCCEEEEEEE-CHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHH-CC--CeEEECCc--cccC-----------CCCC
Confidence            4578888885 6788 456999999999999999875433222222 12  33332222  1111           2579


Q ss_pred             EEEEcCCCC
Q 021960          109 ILYNNAGVL  117 (305)
Q Consensus       109 ~li~nag~~  117 (305)
                      .||...+..
T Consensus        70 ~vV~S~AI~   78 (96)
T d1p3da1          70 VVVVSSAIK   78 (96)
T ss_dssp             EEEECTTSC
T ss_pred             EEEECCCcC
Confidence            999988864

>d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein PH1948
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=88.91  E-value=2.1  Score=32.68  Aligned_cols=75  Identities=27%  Similarity=0.252  Sum_probs=51.1

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHHcCC-eEEEEecCcchhhhHhhhc--CCCCeEEEEecCCCHHHHHHHHHHHHH
Q 021960           26 HRRLEGKVAIITGGARGIGEAAVRLFARHGA-KVVIADVEDTLGSVLASTL--APAPVTFVHCDVSLEEDIENLINSTVS  102 (305)
Q Consensus        26 ~~~l~~k~vlVtGas~giG~~ia~~l~~~g~-~vv~~~r~~~~~~~~~~~~--~~~~v~~~~~D~~d~~~i~~~~~~~~~  102 (305)
                      ..+++|++||=.|++.|.   ++..++.+|+ +|+.++.++...+.+.+.+  .+.+..++..|+.+.            
T Consensus        42 ~~dl~g~~vLDlg~GtG~---l~i~a~~~g~~~v~~vdi~~~~~~~a~~N~~~~~~~~~~~~~d~~~~------------  106 (201)
T d1wy7a1          42 LGDIEGKVVADLGAGTGV---LSYGALLLGAKEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSEF------------  106 (201)
T ss_dssp             TTSSTTCEEEEETCTTCH---HHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGGC------------
T ss_pred             cCCCCCCEEEECcCcchH---HHHHHHHcCCCEEEEEcCcHHHHHHHHHHHHHcCCCceEEECchhhh------------
Confidence            446789999988876662   2334456776 7999998877666554433  245677787776431            


Q ss_pred             hcCCccEEEEcCCC
Q 021960          103 RYGRLDILYNNAGV  116 (305)
Q Consensus       103 ~~g~id~li~nag~  116 (305)
                       .+++|+||.|.-+
T Consensus       107 -~~~fD~Vi~nPP~  119 (201)
T d1wy7a1         107 -NSRVDIVIMNPPF  119 (201)
T ss_dssp             -CCCCSEEEECCCC
T ss_pred             -CCcCcEEEEcCcc
Confidence             3579999999864

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=88.90  E-value=0.25  Score=36.56  Aligned_cols=35  Identities=17%  Similarity=0.376  Sum_probs=29.0

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCC--eEEEEecCc
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGA--KVVIADVED   65 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~--~vv~~~r~~   65 (305)
                      .||.++|.|| |-.|..+|..|.+.+.  +|+++.+++
T Consensus         1 ~gkrivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           1 AGRKVVVVGG-GTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCCcEEEECc-cHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            4899999997 6889999999999875  677776554

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=88.88  E-value=0.23  Score=41.31  Aligned_cols=38  Identities=32%  Similarity=0.420  Sum_probs=31.7

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhh
Q 021960           31 GKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGS   69 (305)
Q Consensus        31 ~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~   69 (305)
                      .|.++|.|| |--|..+|..|++.|++|.++.+++...-
T Consensus         2 ~KKI~IIGa-G~sGL~aA~~L~k~G~~V~viEk~~~iGG   39 (314)
T d2bi7a1           2 SKKILIVGA-GFSGAVIGRQLAEKGHQVHIIDQRDHIGG   39 (314)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSSSSG
T ss_pred             CCEEEEECC-cHHHHHHHHHHHhCCCCEEEEECCCCCcC
Confidence            588999996 67799999999999999999977655433

>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein SMu776, middle and C-terminal domains
species: Streptococcus mutans [TaxId: 1309]

Probab=88.68  E-value=5.4  Score=32.66  Aligned_cols=78  Identities=17%  Similarity=0.109  Sum_probs=49.9

Q ss_pred             CCCEEEEecC-CCchHHHHHHHHHHcCC-eEEEEecCcchhhhHhhhc-----CCCCeEEEEecCCCHHHHHHHHHHHHH
Q 021960           30 EGKVAIITGG-ARGIGEAAVRLFARHGA-KVVIADVEDTLGSVLASTL-----APAPVTFVHCDVSLEEDIENLINSTVS  102 (305)
Q Consensus        30 ~~k~vlVtGa-s~giG~~ia~~l~~~g~-~vv~~~r~~~~~~~~~~~~-----~~~~v~~~~~D~~d~~~i~~~~~~~~~  102 (305)
                      .|+.||=..+ +|+++.+    .+..|+ .|+.++.+....+...+..     ...++.++..|+.      +.++...+
T Consensus       144 ~g~~VLdlf~~~G~~sl~----aa~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i~~d~~------~~l~~~~~  213 (317)
T d2b78a2         144 AGKTVLNLFSYTAAFSVA----AAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVF------DYFKYARR  213 (317)
T ss_dssp             BTCEEEEETCTTTHHHHH----HHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHH------HHHHHHHH
T ss_pred             CCCceeecCCCCcHHHHH----HHhCCCceEEEecCCHHHHHHHHHHHHHhcccCcceEEEEccHH------HHHHHHHh
Confidence            4788886654 4555433    345677 5888898877666554433     2356888888873      34444444


Q ss_pred             hcCCccEEEEcCCCC
Q 021960          103 RYGRLDILYNNAGVL  117 (305)
Q Consensus       103 ~~g~id~li~nag~~  117 (305)
                      ...++|+||..+-.+
T Consensus       214 ~~~~fD~Ii~DPP~f  228 (317)
T d2b78a2         214 HHLTYDIIIIDPPSF  228 (317)
T ss_dssp             TTCCEEEEEECCCCC
T ss_pred             hcCCCCEEEEcChhh
Confidence            556799999987543

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=88.56  E-value=0.13  Score=35.48  Aligned_cols=50  Identities=14%  Similarity=0.236  Sum_probs=37.1

Q ss_pred             cCcceeeeccCCCCCCCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCc
Q 021960           11 LQGIHVLAWDDAPPSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVED   65 (305)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~   65 (305)
                      +.-+|+-.|...    .++.||.|+|.|++ .=|..+|..|++.+.++++..|+.
T Consensus        16 G~i~Hs~~y~~~----~~f~gK~VlVVG~g-~Sa~dia~~l~~~ak~v~~~~~r~   65 (107)
T d2gv8a2          16 GSVLHSSLFREP----ELFVGESVLVVGGA-SSANDLVRHLTPVAKHPIYQSLLG   65 (107)
T ss_dssp             TSEEEGGGCCCG----GGGTTCCEEEECSS-HHHHHHHHHHTTTSCSSEEEECTT
T ss_pred             ccEEECCcCcch----hhcCCCeEEEECCC-CCHHHHHHHHHHhcCEEEEEEecC
Confidence            345677667532    36789999999974 679999999998877776665544

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=88.38  E-value=1.3  Score=32.84  Aligned_cols=79  Identities=14%  Similarity=0.106  Sum_probs=50.3

Q ss_pred             EEEEecCCCchHHHHHHHHHHc-CCeEEE-EecCcchh--hhH-----------------hhhcCCCCeEEEEecCCCHH
Q 021960           33 VAIITGGARGIGEAAVRLFARH-GAKVVI-ADVEDTLG--SVL-----------------ASTLAPAPVTFVHCDVSLEE   91 (305)
Q Consensus        33 ~vlVtGas~giG~~ia~~l~~~-g~~vv~-~~r~~~~~--~~~-----------------~~~~~~~~v~~~~~D~~d~~   91 (305)
                      .+.|.|++|..|+++++...+. ++.++. ++|.....  ...                 .+......   +..|++.++
T Consensus         6 kI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~D---ViIDFs~p~   82 (162)
T d1diha1           6 RVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDDFD---VFIDFTRPE   82 (162)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTTSCS---EEEECSCHH
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccchhhhhhccccCCceeeccHHHHhcccc---eEEEeccHH
Confidence            6899999999999999998875 555442 33322110  000                 00011111   558999999


Q ss_pred             HHHHHHHHHHHhcCCccEEEEcCCC
Q 021960           92 DIENLINSTVSRYGRLDILYNNAGV  116 (305)
Q Consensus        92 ~i~~~~~~~~~~~g~id~li~nag~  116 (305)
                      ...+.++...+.  ++..|+-.-|.
T Consensus        83 ~~~~~~~~a~~~--~~~~ViGTTG~  105 (162)
T d1diha1          83 GTLNHLAFCRQH--GKGMVIGTTGF  105 (162)
T ss_dssp             HHHHHHHHHHHT--TCEEEECCCCC
T ss_pred             HHHHHHHHHHhc--cceeEEecCCC
Confidence            999988766554  46777766664

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=88.36  E-value=0.21  Score=40.23  Aligned_cols=32  Identities=31%  Similarity=0.496  Sum_probs=28.0

Q ss_pred             EEEecCCCchHHHHHHHHHHcCCeEEEEecCcc
Q 021960           34 AIITGGARGIGEAAVRLFARHGAKVVIADVEDT   66 (305)
Q Consensus        34 vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~   66 (305)
                      |+|.|| |-.|..+|.+|+++|++|+++++.+.
T Consensus         6 vvIIGa-Gi~Gls~A~~La~~G~~V~viE~~~~   37 (281)
T d2gf3a1           6 VIVVGA-GSMGMAAGYQLAKQGVKTLLVDAFDP   37 (281)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSCS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            788886 68899999999999999999987643

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=88.36  E-value=0.34  Score=39.81  Aligned_cols=36  Identities=25%  Similarity=0.374  Sum_probs=31.9

Q ss_pred             CCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEe
Q 021960           26 HRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIAD   62 (305)
Q Consensus        26 ~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~   62 (305)
                      ..+++|++++|-| .|.+|..+|+.|.+.|++|+.++
T Consensus        31 ~~~L~gktvaIqG-fGnVG~~~A~~L~e~Gakvv~vs   66 (293)
T d1hwxa1          31 TPGFGDKTFAVQG-FGNVGLHSMRYLHRFGAKCVAVG   66 (293)
T ss_dssp             CSSSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEE
Confidence            4578999999998 58999999999999999988764

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=88.34  E-value=0.29  Score=36.52  Aligned_cols=39  Identities=23%  Similarity=0.467  Sum_probs=34.6

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcc
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDT   66 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~   66 (305)
                      ..+.||+++|.| =|-+|+.+|..|...|++|+++..++-
T Consensus        19 ~~laGk~vvV~G-YG~vGrG~A~~~rg~Ga~V~V~E~DPi   57 (163)
T d1v8ba1          19 FLISGKIVVICG-YGDVGKGCASSMKGLGARVYITEIDPI   57 (163)
T ss_dssp             CCCTTSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSCHH
T ss_pred             ceecCCEEEEec-ccccchhHHHHHHhCCCEEEEEecCch
Confidence            457899999998 589999999999999999999987753

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=88.32  E-value=0.23  Score=38.50  Aligned_cols=32  Identities=25%  Similarity=0.249  Sum_probs=27.7

Q ss_pred             EEEecCCCchHHHHHHHHHHcCCeEEEEecCcc
Q 021960           34 AIITGGARGIGEAAVRLFARHGAKVVIADVEDT   66 (305)
Q Consensus        34 vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~   66 (305)
                      |+|.|| |--|..+|..|+++|.+|.++.+++.
T Consensus         8 viViGa-G~~Gl~~A~~La~~G~~V~vlE~~~~   39 (297)
T d2bcgg1           8 VIVLGT-GITECILSGLLSVDGKKVLHIDKQDH   39 (297)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCCEEEEcCCCC
Confidence            788885 67799999999999999999987653

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=88.06  E-value=0.96  Score=33.98  Aligned_cols=31  Identities=26%  Similarity=0.344  Sum_probs=27.6

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEEecC
Q 021960           33 VAIITGGARGIGEAAVRLFARHGAKVVIADVE   64 (305)
Q Consensus        33 ~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~   64 (305)
                      ++.|.|+ |..|.++|..|++.|.+|.+.+|.
T Consensus         2 kI~ViGa-G~~GtalA~~la~~g~~V~l~~r~   32 (180)
T d1txga2           2 IVSILGA-GAMGSALSVPLVDNGNEVRIWGTE   32 (180)
T ss_dssp             EEEEESC-CHHHHHHHHHHHHHCCEEEEECCG
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCEEEEEEec
Confidence            5778886 899999999999999999998874

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=87.96  E-value=0.42  Score=35.88  Aligned_cols=58  Identities=10%  Similarity=0.096  Sum_probs=43.5

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcC---------------CCCeEEEEecCCCH
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLA---------------PAPVTFVHCDVSLE   90 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~---------------~~~v~~~~~D~~d~   90 (305)
                      .|+.||..|++.|  . .+..|+++|++|+.++.++...+...+...               .....++.+|..+.
T Consensus        20 ~~~rvLd~GCG~G--~-~a~~la~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l   92 (201)
T d1pjza_          20 PGARVLVPLCGKS--Q-DMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFAL   92 (201)
T ss_dssp             TTCEEEETTTCCS--H-HHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSS
T ss_pred             CCCEEEEecCcCC--H-HHHHHHHcCCceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceeccccccc
Confidence            5789999998655  3 666899999999999999888777665442               22346677777663

>d2csua3 c.23.4.1 (A:291-453) Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Succinyl-CoA synthetase domains
family: Succinyl-CoA synthetase domains
domain: Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=87.76  E-value=0.75  Score=33.95  Aligned_cols=81  Identities=21%  Similarity=0.211  Sum_probs=53.3

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCC---CHHHHHHHHHHHHHhcCC
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVS---LEEDIENLINSTVSRYGR  106 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~---d~~~i~~~~~~~~~~~g~  106 (305)
                      +|+.+.|.+.|||.|--++..+.+.|.++.  ..++...+.+.+.+......--.+|+.   +.+...+.++.+.+. +.
T Consensus         2 ~G~rvaiit~sGG~~~l~aD~~~~~Gl~l~--~l~~~t~~~L~~~lp~~~~~~NPlD~~~~~~~~~~~~~l~~~~~d-~~   78 (163)
T d2csua3           2 RGNKVAIMTNAGGPGVLTADELDKRGLKLA--TLEEKTIEELRSFLPPMAAVKNPVDMIASARGEDYYRTAKLLLQD-PN   78 (163)
T ss_dssp             SSSEEEEEESCHHHHHHHHHHHHTTTCEEC--CCCHHHHHHHHHHSCTTCEESSEEECCTTCCHHHHHHHHHHHHHS-TT
T ss_pred             CCCeEEEEECChHHHHHHHHHHHHcCCccC--CCCHHHHHHHHHhCCCcccCCCcccccCCCCHHHHHHHHHHHHcC-CC
Confidence            467788888899999999999999986654  344455555655554332222345553   567777777766554 56


Q ss_pred             ccEEEEc
Q 021960          107 LDILYNN  113 (305)
Q Consensus       107 id~li~n  113 (305)
                      +|.++..
T Consensus        79 vd~v~v~   85 (163)
T d2csua3          79 VDMLIAI   85 (163)
T ss_dssp             CSEEEEE
T ss_pred             cCEEEEe
Confidence            8876543

>d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Putative methyltransferase Atu0340
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=87.29  E-value=4.3  Score=33.18  Aligned_cols=77  Identities=17%  Similarity=0.137  Sum_probs=49.8

Q ss_pred             CCEEEEecC-CCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc-----CCCCeEEEEecCCCHHHHHHHHHHHHHhc
Q 021960           31 GKVAIITGG-ARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL-----APAPVTFVHCDVSLEEDIENLINSTVSRY  104 (305)
Q Consensus        31 ~k~vlVtGa-s~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~-----~~~~v~~~~~D~~d~~~i~~~~~~~~~~~  104 (305)
                      ++.||=..+ +|+++.+    ++..|++|+.++.+....+...+..     ...++.++..|+.      ++++...+..
T Consensus       133 ~~rVLdlf~~tG~~sl~----aa~~GA~V~~VD~s~~al~~a~~N~~ln~~~~~~~~~i~~D~~------~~l~~~~~~~  202 (309)
T d2igta1         133 PLKVLNLFGYTGVASLV----AAAAGAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAM------KFIQREERRG  202 (309)
T ss_dssp             CCEEEEETCTTCHHHHH----HHHTTCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHH------HHHHHHHHHT
T ss_pred             CCeEEEecCCCcHHHHH----HHhCCCeEEEEeChHHHHHHHHHhhhhhcccCCcEEEEeCCHH------HhHHHHhhcC
Confidence            567776544 4544443    4567999999998877766554432     2345788877763      4445554555


Q ss_pred             CCccEEEEcCCCC
Q 021960          105 GRLDILYNNAGVL  117 (305)
Q Consensus       105 g~id~li~nag~~  117 (305)
                      .++|+||.+.=.+
T Consensus       203 ~~fD~IilDPP~f  215 (309)
T d2igta1         203 STYDIILTDPPKF  215 (309)
T ss_dssp             CCBSEEEECCCSE
T ss_pred             CCCCEEEECCCcc
Confidence            6799999987544

>d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=86.99  E-value=3.7  Score=28.86  Aligned_cols=87  Identities=10%  Similarity=0.130  Sum_probs=52.5

Q ss_pred             CCCCCCEEEEecCC---CchHHHHHHHHHHcC-CeEEEEecCcchhhhH--hhhcC--CCCeEEEEecCCCHHHHHHHHH
Q 021960           27 RRLEGKVAIITGGA---RGIGEAAVRLFARHG-AKVVIADVEDTLGSVL--ASTLA--PAPVTFVHCDVSLEEDIENLIN   98 (305)
Q Consensus        27 ~~l~~k~vlVtGas---~giG~~ia~~l~~~g-~~vv~~~r~~~~~~~~--~~~~~--~~~v~~~~~D~~d~~~i~~~~~   98 (305)
                      ..++.|++.|.|||   +..|..+.+.|.+.| .+|+.+..+.....-.  -..+.  ...+..+.+ ....+.+.++++
T Consensus         4 ~lf~PksIAVVGaS~~~~~~g~~v~~~L~~~~~g~v~pVnP~~~~i~G~~~y~sl~dlp~~vDlvvi-~vp~~~~~~~~~   82 (129)
T d2csua1           4 YFFNPKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKEEEVQGVKAYKSVKDIPDEIDLAII-VVPKRFVKDTLI   82 (129)
T ss_dssp             TTTSCSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSCSEETTEECBSSTTSCSSCCSEEEE-CSCHHHHHHHHH
T ss_pred             HhCCCCeEEEEccCCCCCCcHHHHHHHHHHcCCCcEEEeccCccccCCeEeecchhhcCCCCceEEE-ecChHHhHHHHH
Confidence            35688999999999   888999999987765 5787775443221100  00010  112222222 346788888888


Q ss_pred             HHHHhcCCccE-EEEcCCC
Q 021960           99 STVSRYGRLDI-LYNNAGV  116 (305)
Q Consensus        99 ~~~~~~g~id~-li~nag~  116 (305)
                      +..+.  .+.. ++..+|+
T Consensus        83 ~~~~~--g~~~~vi~s~Gf   99 (129)
T d2csua1          83 QCGEK--GVKGVVIITAGF   99 (129)
T ss_dssp             HHHHH--TCCEEEECCCSS
T ss_pred             HHHHc--CCCEEEEecccc
Confidence            87766  3554 4555554

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.91  E-value=1.5  Score=34.10  Aligned_cols=40  Identities=15%  Similarity=0.172  Sum_probs=31.9

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHh
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLA   72 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~   72 (305)
                      .++.||..|.+.|   ..+..|+++|++|+.++.++...+.+.
T Consensus        45 ~~~rvLd~GCG~G---~~a~~LA~~G~~V~gvD~S~~ai~~a~   84 (229)
T d2bzga1          45 SGLRVFFPLCGKA---VEMKWFADRGHSVVGVEISELGIQEFF   84 (229)
T ss_dssp             CSCEEEETTCTTC---THHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             CCCEEEEeCCCCc---HHHHHHHhCCCcEEEEeCCHHHHHHHH
Confidence            5679999998665   457888999999999999887665443

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=86.63  E-value=0.31  Score=39.77  Aligned_cols=32  Identities=16%  Similarity=0.246  Sum_probs=27.4

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCC-eEEEEecCc
Q 021960           33 VAIITGGARGIGEAAVRLFARHGA-KVVIADVED   65 (305)
Q Consensus        33 ~vlVtGas~giG~~ia~~l~~~g~-~vv~~~r~~   65 (305)
                      .|+|.|| |-+|.++|.+|+++|. +|++++++.
T Consensus         3 dViIIGa-Gi~G~s~A~~La~~G~~~V~liE~~~   35 (305)
T d1pj5a2           3 RIVIIGA-GIVGTNLADELVTRGWNNITVLDQGP   35 (305)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence            3788886 7999999999999997 699998764

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=86.57  E-value=2.8  Score=34.48  Aligned_cols=80  Identities=16%  Similarity=0.087  Sum_probs=50.8

Q ss_pred             CCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc--CC-CCeEEEEecCCCHHHHHHHHHHHHHhcC
Q 021960           29 LEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL--AP-APVTFVHCDVSLEEDIENLINSTVSRYG  105 (305)
Q Consensus        29 l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~--~~-~~v~~~~~D~~d~~~i~~~~~~~~~~~g  105 (305)
                      .+|+.||=.++..| |.++  .++..+.+|+.++.++...+...+..  .+ .++.++..|..+      +.+.......
T Consensus       144 ~~g~rVLDl~~gtG-~~s~--~~a~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~~i~~d~~~------~~~~~~~~~~  214 (318)
T d1wxxa2         144 FRGERALDVFSYAG-GFAL--HLALGFREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFD------LLRRLEKEGE  214 (318)
T ss_dssp             CCEEEEEEETCTTT-HHHH--HHHHHEEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHH------HHHHHHHTTC
T ss_pred             hCCCeeeccCCCCc-HHHH--HHHhcCCcEEeecchHHHHHHHHHHHHHcCCCCcceeeccHHH------HhhhhHhhhc
Confidence            46888887665544 3333  24455678999999987766655443  22 457788887643      3333334445


Q ss_pred             CccEEEEcCCCC
Q 021960          106 RLDILYNNAGVL  117 (305)
Q Consensus       106 ~id~li~nag~~  117 (305)
                      ++|.||.++-.+
T Consensus       215 ~fD~Vi~DpP~~  226 (318)
T d1wxxa2         215 RFDLVVLDPPAF  226 (318)
T ss_dssp             CEEEEEECCCCS
T ss_pred             CCCEEEEcCCcc
Confidence            799999987654

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=86.56  E-value=0.37  Score=38.86  Aligned_cols=35  Identities=29%  Similarity=0.363  Sum_probs=31.3

Q ss_pred             CCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEe
Q 021960           27 RRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIAD   62 (305)
Q Consensus        27 ~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~   62 (305)
                      .+++|++++|-| .|.+|..+++.|.+.|++|+.++
T Consensus        32 ~~l~g~~v~IQG-fGnVG~~~a~~L~e~Gakvvavs   66 (255)
T d1bgva1          32 DTLVGKTVALAG-FGNVAWGAAKKLAELGAKAVTLS   66 (255)
T ss_dssp             CCSTTCEEEECC-SSHHHHHHHHHHHHHTCEEEEEE
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEe
Confidence            467899999999 69999999999999999988664

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=86.44  E-value=0.76  Score=34.68  Aligned_cols=73  Identities=19%  Similarity=0.194  Sum_probs=41.9

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCC-eEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEEE
Q 021960           33 VAIITGGARGIGEAAVRLFARHGA-KVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILY  111 (305)
Q Consensus        33 ~vlVtGas~giG~~ia~~l~~~g~-~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~li  111 (305)
                      .|-|.||||-.|..+++.|+++-. ++..+..+......+.+..... .....+...+.+.+.   +       .+|+++
T Consensus         3 kVaIvGATGyvG~eLirlL~~HP~~ei~~l~s~~~aG~~i~~~~p~~-~~~~~~~~~~~~~~~---~-------~~dvvf   71 (176)
T d1vkna1           3 RAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTYAGKKLEEIFPST-LENSILSEFDPEKVS---K-------NCDVLF   71 (176)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTTTTSBHHHHCGGG-CCCCBCBCCCHHHHH---H-------HCSEEE
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCCceEEEeeccccCCCcccccCchh-hccccccccCHhHhc---c-------ccceEE
Confidence            689999999999999999998753 5554443333333333222110 111123334544332   1       488888


Q ss_pred             EcCCC
Q 021960          112 NNAGV  116 (305)
Q Consensus       112 ~nag~  116 (305)
                      .+...
T Consensus        72 ~a~p~   76 (176)
T d1vkna1          72 TALPA   76 (176)
T ss_dssp             ECCST
T ss_pred             Ecccc
Confidence            87653

>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=86.37  E-value=0.32  Score=37.96  Aligned_cols=34  Identities=26%  Similarity=0.473  Sum_probs=29.7

Q ss_pred             CCEEEEecCCCchHH-----HHHHHHHHcCCeEEEEecC
Q 021960           31 GKVAIITGGARGIGE-----AAVRLFARHGAKVVIADVE   64 (305)
Q Consensus        31 ~k~vlVtGas~giG~-----~ia~~l~~~g~~vv~~~r~   64 (305)
                      +|++.|+|+-||.|+     .+|..|+++|.+|++++-+
T Consensus         2 ~~vIav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~D   40 (237)
T d1g3qa_           2 GRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGD   40 (237)
T ss_dssp             CEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             CeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence            688999999999999     5677888999999999854

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=86.09  E-value=0.44  Score=38.05  Aligned_cols=34  Identities=29%  Similarity=0.495  Sum_probs=30.8

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEe
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIAD   62 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~   62 (305)
                      +++|++++|-| .|.+|..+|+.|.+.|++|+.++
T Consensus        28 ~l~g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vs   61 (242)
T d1v9la1          28 GIEGKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVS   61 (242)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEE
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEee
Confidence            68899999998 68999999999999999988664

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=85.87  E-value=3.9  Score=28.10  Aligned_cols=81  Identities=15%  Similarity=0.162  Sum_probs=50.8

Q ss_pred             CEEEEecCC---CchHHHHHHHHHHcCCeEEEEecCcchhhhH-----hhhcCCCCeEEEEecCCCHHHHHHHHHHHHHh
Q 021960           32 KVAIITGGA---RGIGEAAVRLFARHGAKVVIADVEDTLGSVL-----ASTLAPAPVTFVHCDVSLEEDIENLINSTVSR  103 (305)
Q Consensus        32 k~vlVtGas---~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~-----~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~  103 (305)
                      |++.|.|+|   +..|..+.+.|.+.|++|+.+..+.....-.     ...+ ...+..+.+ ....+.+.++++++.+.
T Consensus         2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVnP~~~~i~G~~~y~sl~~l-p~~~D~vvi-~vp~~~~~~~l~~~~~~   79 (116)
T d1y81a1           2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEIEGLKCYRSVREL-PKDVDVIVF-VVPPKVGLQVAKEAVEA   79 (116)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGS-CTTCCEEEE-CSCHHHHHHHHHHHHHT
T ss_pred             cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEccccccccCccccccchhc-cccceEEEE-EeCHHHHHHHHHHHHhc
Confidence            789999999   5588999999999999988775432211000     0011 112222222 34677788888877655


Q ss_pred             cCCccEEEEcCCC
Q 021960          104 YGRLDILYNNAGV  116 (305)
Q Consensus       104 ~g~id~li~nag~  116 (305)
                        .+..++...|.
T Consensus        80 --g~k~v~~~~g~   90 (116)
T d1y81a1          80 --GFKKLWFQPGA   90 (116)
T ss_dssp             --TCCEEEECTTS
T ss_pred             --CCceEEeccch
Confidence              36677776664

>d1u0sy_ c.23.1.1 (Y:) CheY protein {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: CheY protein
species: Thermotoga maritima [TaxId: 2336]

Probab=85.56  E-value=2.7  Score=28.83  Aligned_cols=81  Identities=12%  Similarity=0.088  Sum_probs=52.2

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHcCCeEEEEecC-cchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 021960           31 GKVAIITGGARGIGEAAVRLFARHGAKVVIADVE-DTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDI  109 (305)
Q Consensus        31 ~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~-~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~  109 (305)
                      ||+|||.--..-+-..+...|.+.|+.|+....+ ....+.+.+.  ..++.++..++-+.+.+ ++++++.+....+-+
T Consensus         1 GkrILivDD~~~~~~~l~~~L~~~g~~v~~~a~~~~~al~~~~~~--~~dliilD~~mp~~~G~-e~~~~ir~~~~~~pv   77 (118)
T d1u0sy_           1 GKRVLIVDDAAFMRMMLKDIITKAGYEVAGEATNGREAVEKYKEL--KPDIVTMDITMPEMNGI-DAIKEIMKIDPNAKI   77 (118)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH--CCSEEEEECSCGGGCHH-HHHHHHHHHCTTCCE
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCHHHHHHHHHhc--cCCEEEEecCCCCCCHH-HHHHHHHHhCCCCcE
Confidence            7899999999999999999999999998754333 2333333322  23354444444444443 456667666666777


Q ss_pred             EEEcC
Q 021960          110 LYNNA  114 (305)
Q Consensus       110 li~na  114 (305)
                      ++..+
T Consensus        78 i~ls~   82 (118)
T d1u0sy_          78 IVCSA   82 (118)
T ss_dssp             EEEEC
T ss_pred             EEEEc
Confidence            77653

>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Arsenite-translocating ATPase ArsA
species: Escherichia coli [TaxId: 562]

Probab=85.30  E-value=0.42  Score=38.47  Aligned_cols=37  Identities=19%  Similarity=0.287  Sum_probs=31.0

Q ss_pred             CCCEEEEecCCCchHHHH-----HHHHHHcCCeEEEEecCcc
Q 021960           30 EGKVAIITGGARGIGEAA-----VRLFARHGAKVVIADVEDT   66 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~i-----a~~l~~~g~~vv~~~r~~~   66 (305)
                      +++.++|+.|-||+|+..     |..|+++|.+|++++.+..
T Consensus        18 ~~~~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~Dp~   59 (279)
T d1ihua2          18 NEHGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDPA   59 (279)
T ss_dssp             TSCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESCCC
T ss_pred             CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            467788887799999965     7889999999999988753

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=84.78  E-value=0.46  Score=34.83  Aligned_cols=41  Identities=15%  Similarity=0.177  Sum_probs=33.4

Q ss_pred             EEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhc
Q 021960           34 AIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTL   75 (305)
Q Consensus        34 vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~   75 (305)
                      +.|.| +|-+|.++++.|.+.|+++++.+|+.++.+.+.+..
T Consensus         3 Ig~IG-~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~   43 (152)
T d2ahra2           3 IGIIG-VGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQL   43 (152)
T ss_dssp             EEEEC-CSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHH
T ss_pred             EEEEe-ccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhcccc
Confidence            55666 689999999999999999999999877766665443

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.16  E-value=1.6  Score=35.64  Aligned_cols=74  Identities=19%  Similarity=0.237  Sum_probs=49.4

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCC-eEEEEecCcchhhhH---hhhcCCCCeEEEEecCCCHHHHHHHHHHHHHh
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGA-KVVIADVEDTLGSVL---ASTLAPAPVTFVHCDVSLEEDIENLINSTVSR  103 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~-~vv~~~r~~~~~~~~---~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~  103 (305)
                      .++|++||-.|++.|+   ++..+++.|+ +|+.++.++......   .+.....++.++..|+.+...          .
T Consensus        33 ~~~~~~VLDiGcG~G~---lsl~aa~~Ga~~V~aid~s~~~~~a~~~~~~~~~~~~i~~~~~~~~~l~~----------~   99 (311)
T d2fyta1          33 IFKDKVVLDVGCGTGI---LSMFAAKAGAKKVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIEEVHL----------P   99 (311)
T ss_dssp             GTTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSCC----------S
T ss_pred             cCCcCEEEEECCCCCH---HHHHHHHcCCCEEEEEeCHHHHHHHHHHHHHhCCCccceEEEeeHHHhcC----------c
Confidence            4578999999988775   4556778887 588888876543221   111234678999998876421          1


Q ss_pred             cCCccEEEEcC
Q 021960          104 YGRLDILYNNA  114 (305)
Q Consensus       104 ~g~id~li~na  114 (305)
                      ..++|+||..-
T Consensus       100 ~~~~D~Ivse~  110 (311)
T d2fyta1         100 VEKVDVIISEW  110 (311)
T ss_dssp             CSCEEEEEECC
T ss_pred             cccceEEEEee
Confidence            24689998753

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.10  E-value=0.66  Score=37.48  Aligned_cols=35  Identities=29%  Similarity=0.366  Sum_probs=28.5

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCc
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIADVED   65 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~   65 (305)
                      +.+.|+|.|| |==|+..|..|+++|++|+++..++
T Consensus         4 ~~~kViVIGa-G~aGL~aA~~L~~~G~~V~VlEa~~   38 (449)
T d2dw4a2           4 KTGKVIIIGS-GVSGLAAARQLQSFGMDVTLLEARD   38 (449)
T ss_dssp             CCCEEEEECC-BHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            3456899996 5669999999999999999986543

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=83.72  E-value=0.67  Score=33.74  Aligned_cols=36  Identities=11%  Similarity=0.142  Sum_probs=28.9

Q ss_pred             EEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhh
Q 021960           34 AIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSV   70 (305)
Q Consensus        34 vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~   70 (305)
                      +-|.| .|.+|.++++.|+++|+.|++.+++......
T Consensus         3 IgiIG-~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~   38 (152)
T d1i36a2           3 VGFIG-FGEVAQTLASRLRSRGVEVVTSLEGRSPSTI   38 (152)
T ss_dssp             EEEES-CSHHHHHHHHHHHHTTCEEEECCTTCCHHHH
T ss_pred             EEEEc-HHHHHHHHHHHHHHCCCeEEEEcCchhHHHH
Confidence            55665 5999999999999999999988876655433

>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=83.65  E-value=0.43  Score=37.11  Aligned_cols=33  Identities=24%  Similarity=0.422  Sum_probs=28.5

Q ss_pred             CEEEEecCCCchHH-----HHHHHHHHcCCeEEEEecC
Q 021960           32 KVAIITGGARGIGE-----AAVRLFARHGAKVVIADVE   64 (305)
Q Consensus        32 k~vlVtGas~giG~-----~ia~~l~~~g~~vv~~~r~   64 (305)
                      |++.|+++-||.|+     .+|..|+++|.+|.+++.+
T Consensus         2 kvIav~s~KGGvGKTtia~nlA~~la~~g~~VlliD~D   39 (232)
T d1hyqa_           2 RTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDAD   39 (232)
T ss_dssp             EEEEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             EEEEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence            68999999999998     5677789999999998765

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=83.60  E-value=6.3  Score=31.61  Aligned_cols=34  Identities=24%  Similarity=0.304  Sum_probs=23.5

Q ss_pred             CEEEEecC-CCch---HHHHHHHHHHcCCeEEEEecCc
Q 021960           32 KVAIITGG-ARGI---GEAAVRLFARHGAKVVIADVED   65 (305)
Q Consensus        32 k~vlVtGa-s~gi---G~~ia~~l~~~g~~vv~~~r~~   65 (305)
                      |.+||++| |||-   ..+++++|.++|+.|..++..+
T Consensus         1 kkili~~~GtGGHv~~a~al~~~L~~~G~eV~~i~~~~   38 (351)
T d1f0ka_           1 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTAD   38 (351)
T ss_dssp             CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTT
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHHHHhCCCEEEEEEeCC
Confidence            45666554 4333   4478999999999998876544

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=83.21  E-value=0.58  Score=36.69  Aligned_cols=34  Identities=35%  Similarity=0.460  Sum_probs=28.7

Q ss_pred             EEEecCCCchHHHHHHHHHHcCCeEEEEecCcchh
Q 021960           34 AIITGGARGIGEAAVRLFARHGAKVVIADVEDTLG   68 (305)
Q Consensus        34 vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~   68 (305)
                      |+|.|| |--|...|..|+++|++|+++.+.....
T Consensus         5 ViIIGa-G~aGl~aA~~la~~G~~V~liEk~~~~g   38 (251)
T d2i0za1           5 VIVIGG-GPSGLMAAIGAAEEGANVLLLDKGNKLG   38 (251)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCCCCC
Confidence            688886 5779999999999999999998765443

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=82.99  E-value=3.9  Score=33.56  Aligned_cols=78  Identities=13%  Similarity=0.072  Sum_probs=49.1

Q ss_pred             CCCEEEEecCC-CchHHHHHHHHHHcCC-eEEEEecCcchhhhHhhhc--C--CCCeEEEEecCCCHHHHHHHHHHHHHh
Q 021960           30 EGKVAIITGGA-RGIGEAAVRLFARHGA-KVVIADVEDTLGSVLASTL--A--PAPVTFVHCDVSLEEDIENLINSTVSR  103 (305)
Q Consensus        30 ~~k~vlVtGas-~giG~~ia~~l~~~g~-~vv~~~r~~~~~~~~~~~~--~--~~~v~~~~~D~~d~~~i~~~~~~~~~~  103 (305)
                      .|++||=.++. |+++..    +++.|+ .|+.++.++...+...+..  .  ..++.++..|+.      +.+......
T Consensus       145 ~g~~VLDl~~g~G~~si~----~a~~ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~~~d~~------~~~~~~~~~  214 (324)
T d2as0a2         145 PGDRVLDVFTYTGGFAIH----AAIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAF------EEMEKLQKK  214 (324)
T ss_dssp             TTCEEEETTCTTTHHHHH----HHHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHH------HHHHHHHHT
T ss_pred             CCCeeecccCcccchhhh----hhhcCCcEEEeecCCHHHHHHHHHHHHHcCCCccceeeechhh------hhhHHHHhc
Confidence            37888877654 444433    456676 6999999887766654433  2  235777777663      233334444


Q ss_pred             cCCccEEEEcCCCC
Q 021960          104 YGRLDILYNNAGVL  117 (305)
Q Consensus       104 ~g~id~li~nag~~  117 (305)
                      ..++|.||.++-..
T Consensus       215 ~~~fD~Vi~DpP~~  228 (324)
T d2as0a2         215 GEKFDIVVLDPPAF  228 (324)
T ss_dssp             TCCEEEEEECCCCS
T ss_pred             cCCCCchhcCCccc
Confidence            45799999987654

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=82.99  E-value=0.58  Score=34.74  Aligned_cols=31  Identities=16%  Similarity=0.058  Sum_probs=25.5

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHcCCeEEEE
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARHGAKVVIA   61 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~   61 (305)
                      +++.|+|.|| |.+|..+|..|.+.|.++.++
T Consensus         2 ~~~~VvIIGg-G~~G~e~A~~l~~~g~~v~v~   32 (185)
T d1q1ra1           2 ANDNVVIVGT-GLAGVEVAFGLRASGWEGNIR   32 (185)
T ss_dssp             CSCEEEEECC-SHHHHHHHHHHHHTTCCSEEE
T ss_pred             CCCCEEEECC-cHHHHHHHHHHHHcCCceEEE
Confidence            3678899986 799999999999999875443

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=82.48  E-value=5.2  Score=27.78  Aligned_cols=77  Identities=12%  Similarity=0.118  Sum_probs=49.3

Q ss_pred             CCCEEEEecCCC----------chHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHH
Q 021960           30 EGKVAIITGGAR----------GIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINS   99 (305)
Q Consensus        30 ~~k~vlVtGas~----------giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~   99 (305)
                      +.|.+||.|+..          --+.+.++.|.+.|++++++..+.+....-..  -.+++.+   +--..+.+.++++.
T Consensus         3 ~~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTVstd~d--~aD~lYf---eplt~e~v~~Ii~~   77 (121)
T d1a9xa4           3 DREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYD--TSDRLYF---EPVTLEDVLEIVRI   77 (121)
T ss_dssp             SSCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSSTTSTT--SSSEEEC---CCCSHHHHHHHHHH
T ss_pred             CCCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhhhhcChh--hcCceEE---ccCCHHHHHHHHHH
Confidence            457899998742          23558889999999999999777654332111  1222333   33356777776654


Q ss_pred             HHHhcCCccEEEEcCCC
Q 021960          100 TVSRYGRLDILYNNAGV  116 (305)
Q Consensus       100 ~~~~~g~id~li~nag~  116 (305)
                      -     ++|.++...|.
T Consensus        78 E-----~p~~ii~~~GG   89 (121)
T d1a9xa4          78 E-----KPKGVIVQYGG   89 (121)
T ss_dssp             H-----CCSEEECSSST
T ss_pred             h-----CCCEEEeehhh
Confidence            3     68999877663

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.45  E-value=1.2  Score=36.40  Aligned_cols=25  Identities=16%  Similarity=0.165  Sum_probs=21.7

Q ss_pred             CCchHHHHHHHHHHcCCeEEEEecC
Q 021960           40 ARGIGEAAVRLFARHGAKVVIADVE   64 (305)
Q Consensus        40 s~giG~~ia~~l~~~g~~vv~~~r~   64 (305)
                      ||..|.++|+.|..+|+.|+++.+.
T Consensus        45 SGk~G~alA~~~~~~Ga~V~li~g~   69 (290)
T d1p9oa_          45 SGRRGATSAEAFLAAGYGVLFLYRA   69 (290)
T ss_dssp             CCHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             chHHHHHHHHHHHHcCCEEEEEecC
Confidence            4678999999999999999988543

>d1w4xa2 c.3.1.5 (A:155-389) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=82.10  E-value=1.8  Score=33.10  Aligned_cols=48  Identities=15%  Similarity=0.223  Sum_probs=36.1

Q ss_pred             ceeeeccCCCCCCCCCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCc
Q 021960           14 IHVLAWDDAPPSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVED   65 (305)
Q Consensus        14 ~~~~~~~~~~~~~~~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~   65 (305)
                      +|+..|.   ....++.||.|+|.|+ |-=|..+|..+++.+.+++.+.|+.
T Consensus        18 ~HS~~~~---~~~~~~~gK~V~VvG~-G~Sa~dia~~~~~~~~~~~~~~~~~   65 (235)
T d1w4xa2          18 YHTGNWP---HEPVDFSGQRVGVIGT-GSSGIQVSPQIAKQAAELFVFQRTP   65 (235)
T ss_dssp             EEGGGCC---SSCCCCBTCEEEEECC-SHHHHHHHHHHHHHBSEEEEEESSC
T ss_pred             EecCcCC---CCCCCCCCCEEEEECC-CccHHHHHHHHHhhhcccccccccc
Confidence            4555552   2234678999999986 4569999999999999988877664

>d1peya_ c.23.1.1 (A:) Sporulation response regulator Spo0F {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Sporulation response regulator Spo0F
species: Bacillus subtilis [TaxId: 1423]

Probab=81.94  E-value=3.8  Score=28.05  Aligned_cols=81  Identities=10%  Similarity=0.143  Sum_probs=53.3

Q ss_pred             CCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCCCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEE
Q 021960           31 GKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDIL  110 (305)
Q Consensus        31 ~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~l  110 (305)
                      +|.|||.--...+-..+.+.|.+.|+.|..+....+..+.+.+.  ...+.++...+-+.+.+ ++++++.+....+-++
T Consensus         1 NkrILvVDD~~~~~~~l~~~L~~~g~~v~~a~~g~eal~~~~~~--~~dlillD~~mP~~~G~-el~~~lr~~~~~~pvi   77 (119)
T d1peya_           1 NEKILIVDDQSGIRILLNEVFNKEGYQTFQAANGLQALDIVTKE--RPDLVLLDMKIPGMDGI-EILKRMKVIDENIRVI   77 (119)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEEESSHHHHHHHHHHH--CCSEEEEESCCTTCCHH-HHHHHHHHHCTTCEEE
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHcCCEEEEeCCHHHHHHHHHhC--CCCEEEEeccCCCCCHH-HHHHHHHHhCCCCcEE
Confidence            57899999999999999999999999998765544444444332  23344443334454443 4566676666666667


Q ss_pred             EEcC
Q 021960          111 YNNA  114 (305)
Q Consensus       111 i~na  114 (305)
                      +..+
T Consensus        78 ~lt~   81 (119)
T d1peya_          78 IMTA   81 (119)
T ss_dssp             EEES
T ss_pred             EEec
Confidence            6654

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=81.89  E-value=0.79  Score=36.25  Aligned_cols=37  Identities=24%  Similarity=0.329  Sum_probs=30.6

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhh
Q 021960           33 VAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSV   70 (305)
Q Consensus        33 ~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~   70 (305)
                      -|+|.|| |--|...|..|+++|.+|+++.+.......
T Consensus         6 DViIIGa-G~aGl~aA~~la~~G~~V~vlEk~~~~G~k   42 (253)
T d2gqfa1           6 ENIIIGA-GAAGLFCAAQLAKLGKSVTVFDNGKKIGRK   42 (253)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCEEEECSSSSSCHH
T ss_pred             cEEEECc-CHHHHHHHHHHHHCCCcEEEEecCCCCCCc
Confidence            3788886 677999999999999999999987655443

>d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein TT1466
species: Thermus thermophilus [TaxId: 274]

Probab=81.67  E-value=2.9  Score=29.74  Aligned_cols=84  Identities=12%  Similarity=0.221  Sum_probs=54.0

Q ss_pred             CCCEEEEecCC---CchHHHHHHHHHHcCCeEEEEecCcchhhhHhhh----c--CCCCeEEEEecCCCHHHHHHHHHHH
Q 021960           30 EGKVAIITGGA---RGIGEAAVRLFARHGAKVVIADVEDTLGSVLAST----L--APAPVTFVHCDVSLEEDIENLINST  100 (305)
Q Consensus        30 ~~k~vlVtGas---~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~----~--~~~~v~~~~~D~~d~~~i~~~~~~~  100 (305)
                      +.|++.|.|||   +..|..+.+.|.+.|+++..+--+....+.....    +  ....+..+.+ +...+.+.+++++.
T Consensus        12 ~pksIAVVGaS~~~~k~g~~v~~~L~~~g~~~~~v~~~~~~~~i~g~~~~~~l~~i~~~iD~v~v-~~p~~~v~~~v~~~   90 (136)
T d1iuka_          12 QAKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPRFQGEELFGEEAVASLLDLKEPVDILDV-FRPPSALMDHLPEV   90 (136)
T ss_dssp             HCCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGGGTTSEETTEECBSSGGGCCSCCSEEEE-CSCHHHHTTTHHHH
T ss_pred             CCCeEEEEeecCCCCCchHHHHHHHhcCCCCceEEEeccccceeeceecccchhhccCCCceEEE-eccHHHHHHHHHHH
Confidence            56899999999   5689999999999999988875432211110000    0  0112333323 34678888888887


Q ss_pred             HHhcCCccEEEEcCCC
Q 021960          101 VSRYGRLDILYNNAGV  116 (305)
Q Consensus       101 ~~~~g~id~li~nag~  116 (305)
                      .+.  .+..++...|.
T Consensus        91 ~~~--g~k~i~~q~G~  104 (136)
T d1iuka_          91 LAL--RPGLVWLQSGI  104 (136)
T ss_dssp             HHH--CCSCEEECTTC
T ss_pred             Hhh--CCCeEEEecCc
Confidence            766  36677777775

>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=81.65  E-value=0.68  Score=37.68  Aligned_cols=31  Identities=29%  Similarity=0.456  Sum_probs=27.3

Q ss_pred             EEEecCCCchHHHHHHHHHHcCCeEEEEecCc
Q 021960           34 AIITGGARGIGEAAVRLFARHGAKVVIADVED   65 (305)
Q Consensus        34 vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~   65 (305)
                      |||.|+ |-.|...|..|+++|++|+++.+..
T Consensus        19 VlVIG~-G~aGl~aA~~la~~G~~V~lvEK~~   49 (308)
T d1y0pa2          19 VVVVGS-GGAGFSAAISATDSGAKVILIEKEP   49 (308)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEecCC
Confidence            688885 7889999999999999999997654

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=81.56  E-value=1.7  Score=31.77  Aligned_cols=33  Identities=21%  Similarity=0.241  Sum_probs=26.8

Q ss_pred             CEEEEecCCCchHHHHHHHHHHc--CCeEEEEecC
Q 021960           32 KVAIITGGARGIGEAAVRLFARH--GAKVVIADVE   64 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~--g~~vv~~~r~   64 (305)
                      |.+.|.|+||-||.....-..++  .++|+.+.-.
T Consensus         2 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~   36 (151)
T d1q0qa2           2 KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAG   36 (151)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEES
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEec
Confidence            57899999999999999988876  4677766543

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=81.41  E-value=0.57  Score=37.20  Aligned_cols=33  Identities=18%  Similarity=0.276  Sum_probs=28.2

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEEecCcc
Q 021960           33 VAIITGGARGIGEAAVRLFARHGAKVVIADVEDT   66 (305)
Q Consensus        33 ~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~   66 (305)
                      .|+|.|| |--|...|..|+++|++|+++.+++.
T Consensus         2 ~V~IIGa-G~aGL~aA~~L~~~G~~V~vlE~~~~   34 (347)
T d2ivda1           2 NVAVVGG-GISGLAVAHHLRSRGTDAVLLESSAR   34 (347)
T ss_dssp             CEEEECC-BHHHHHHHHHHHTTTCCEEEECSSSS
T ss_pred             eEEEECC-CHHHHHHHHHHHhCCCCEEEEecCCC
Confidence            4789997 66799999999999999999977643

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=81.25  E-value=1.5  Score=31.96  Aligned_cols=35  Identities=17%  Similarity=0.383  Sum_probs=28.2

Q ss_pred             CCCEEEEecCCCchHHHHHHHHHHc--CCeEEEEecC
Q 021960           30 EGKVAIITGGARGIGEAAVRLFARH--GAKVVIADVE   64 (305)
Q Consensus        30 ~~k~vlVtGas~giG~~ia~~l~~~--g~~vv~~~r~   64 (305)
                      +.|.+.|.|+||-||.....-+.++  .++|+.++-.
T Consensus         1 ~pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~   37 (150)
T d1r0ka2           1 QPRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTAN   37 (150)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEES
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeC
Confidence            3589999999999999999988775  5777766543

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=80.85  E-value=1.8  Score=31.36  Aligned_cols=79  Identities=8%  Similarity=0.026  Sum_probs=46.9

Q ss_pred             EEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcCC--------CCeEEEEecCCCHHHHHHHHHHHHHhcC
Q 021960           34 AIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAP--------APVTFVHCDVSLEEDIENLINSTVSRYG  105 (305)
Q Consensus        34 vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~~--------~~v~~~~~D~~d~~~i~~~~~~~~~~~g  105 (305)
                      +-+.| .|-.|..+|++|++.|+.++ ..|+..+.....+....        .+...+...+.+.+++....+.+.+...
T Consensus         3 Ig~IG-lG~MG~~ma~~L~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~l~~~~~   80 (156)
T d2cvza2           3 VAFIG-LGAMGYPMAGHLARRFPTLV-WNRTFEKALRHQEEFGSEAVPLERVAEARVIFTCLPTTREVYEVAEALYPYLR   80 (156)
T ss_dssp             EEEEC-CSTTHHHHHHHHHTTSCEEE-ECSSTHHHHHHHHHHCCEECCGGGGGGCSEEEECCSSHHHHHHHHHHHTTTCC
T ss_pred             EEEEe-HHHHHHHHHHHHHhCCCEEE-EeCCHHHHHHHHHHcCCcccccccccceeEEEecccchhhhhhhhcccccccc
Confidence            45666 48999999999999987654 55655544333322210        1122334456677788777777665543


Q ss_pred             CccEEEEcC
Q 021960          106 RLDILYNNA  114 (305)
Q Consensus       106 ~id~li~na  114 (305)
                      +-.++|.+.
T Consensus        81 ~~~~iid~s   89 (156)
T d2cvza2          81 EGTYWVDAT   89 (156)
T ss_dssp             TTEEEEECS
T ss_pred             ccccccccc
Confidence            344455443

>d1m1na_ c.92.2.3 (A:) Nitrogenase iron-molybdenum protein, alpha chain {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: Chelatase-like
superfamily: "Helical backbone" metal receptor
family: Nitrogenase iron-molybdenum protein
domain: Nitrogenase iron-molybdenum protein, alpha chain
species: Azotobacter vinelandii [TaxId: 354]

Probab=80.58  E-value=2.3  Score=37.27  Aligned_cols=78  Identities=18%  Similarity=0.191  Sum_probs=50.3

Q ss_pred             CCCCCEEEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcC--CCCeEEEEecCCCHHHHHHHHHHHHHhcC
Q 021960           28 RLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLA--PAPVTFVHCDVSLEEDIENLINSTVSRYG  105 (305)
Q Consensus        28 ~l~~k~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~--~~~v~~~~~D~~d~~~i~~~~~~~~~~~g  105 (305)
                      .+.||.+.|.|+ +....++++.|.+.|+.|+.+.......+.......  +...  +..|=.|..++.+.+++.     
T Consensus       342 ~l~Gkrv~i~~~-~~~~~~l~~~l~elGmevv~~~~~~~~~~d~~~~~~~~~~~~--~i~~d~~~~el~~~i~~~-----  413 (477)
T d1m1na_         342 RLEGKRVMLYIG-GLRPRHVIGAYEDLGMEVVGTGYEFAHNDDYDRTMKEMGDST--LLYDDVTGYEFEEFVKRI-----  413 (477)
T ss_dssp             HHTTCEEEECBS-SSHHHHTHHHHHTTTCEEEEEEESSCCHHHHHTTTTTSCTTC--EEEESCBHHHHHHHHHHH-----
T ss_pred             hhcCCcEEEecC-chhHHHHHHHHHHCCCEEEEEeecCCChHHHHHHHHhcCCCc--EEecCCCHHHHHHHHHhc-----
Confidence            467999999876 467899999999999998887654333332222221  1112  223444677777777765     


Q ss_pred             CccEEEEc
Q 021960          106 RLDILYNN  113 (305)
Q Consensus       106 ~id~li~n  113 (305)
                      ++|.+|-+
T Consensus       414 ~pDL~ig~  421 (477)
T d1m1na_         414 KPDLIGSG  421 (477)
T ss_dssp             CCSEEEEC
T ss_pred             CCCEEEEC
Confidence            79999843

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=80.14  E-value=1.2  Score=32.31  Aligned_cols=35  Identities=17%  Similarity=0.321  Sum_probs=26.9

Q ss_pred             CEEEEecCCCchHHHHHHHHHHcCC---eEEEEecCcc
Q 021960           32 KVAIITGGARGIGEAAVRLFARHGA---KVVIADVEDT   66 (305)
Q Consensus        32 k~vlVtGas~giG~~ia~~l~~~g~---~vv~~~r~~~   66 (305)
                      ..|.|.||||-.|..+++.|.++++   ++..+..+..
T Consensus         3 mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~~   40 (144)
T d2hjsa1           3 LNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAES   40 (144)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeeccc
Confidence            4689999999999999999987653   5665544433

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=80.13  E-value=1.4  Score=33.50  Aligned_cols=77  Identities=16%  Similarity=0.213  Sum_probs=54.4

Q ss_pred             EEEecCCCchHHHHHHHHHHcCCeEEEEecCcchhhhHhhhcC--CCCeEEEEecCCCHHHHHHHHHHHHHhcCCccEEE
Q 021960           34 AIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLA--PAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILY  111 (305)
Q Consensus        34 vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~~~~~~~~~~~--~~~v~~~~~D~~d~~~i~~~~~~~~~~~g~id~li  111 (305)
                      +=+|.|+||.-.++.+.+ . +.+|+.+++++...+...+.+.  +.++.++..++++...+   ++..  ..+++|.++
T Consensus        28 lD~t~G~Gghs~~il~~~-~-~~~vi~~D~d~~~l~~a~~~l~~~~~r~~~~~~~f~~~~~~---~~~~--~~~~vdgIl  100 (192)
T d1m6ya2          28 LDCTVGEGGHSRAILEHC-P-GCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADFL---LKTL--GIEKVDGIL  100 (192)
T ss_dssp             EETTCTTSHHHHHHHHHC-T-TCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHHH---HHHT--TCSCEEEEE
T ss_pred             EEecCCCcHHHHHHHhcC-C-CCeEEEeechHHHHHHHHHhhccccccccchhHHHhhHHHH---HHHc--CCCCcceee
Confidence            335778888888888776 3 4689999999887776655442  45799999988875433   2221  135799999


Q ss_pred             EcCCCC
Q 021960          112 NNAGVL  117 (305)
Q Consensus       112 ~nag~~  117 (305)
                      ...|..
T Consensus       101 ~DlGvS  106 (192)
T d1m6ya2         101 MDLGVS  106 (192)
T ss_dssp             EECSCC
T ss_pred             eccchh
Confidence            998874

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=80.10  E-value=0.76  Score=36.92  Aligned_cols=33  Identities=21%  Similarity=0.238  Sum_probs=28.6

Q ss_pred             EEEEecCCCchHHHHHHHHHHcCCeEEEEecCcc
Q 021960           33 VAIITGGARGIGEAAVRLFARHGAKVVIADVEDT   66 (305)
Q Consensus        33 ~vlVtGas~giG~~ia~~l~~~g~~vv~~~r~~~   66 (305)
                      .|+|.|| |-.|+.+|..|+++|++|+++.++..
T Consensus         4 ~V~IvGa-Gp~Gl~~A~~L~~~G~~v~vlE~~~~   36 (292)
T d1k0ia1           4 QVAIIGA-GPSGLLLGQLLHKAGIDNVILERQTP   36 (292)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            4789997 47799999999999999999988653