Citrus Sinensis ID: 021960

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-----
MPAQVMPETNLQGIHVLAWDDAPPSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTSRNCVGL
ccccccccccccccccccccccccccccccccEEEEEccccHHHHHHHHHHHHcccEEEEEEccccHHHHHHHHcccccEEEEEcccccHHHHHHHHHHHHHHcccccEEEEccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEcccHHHcccccccHHHHHHHHHHHHHHHHHHHHHcccccEEEcccccccccHHHHHHHHcccccHHHHHHHccccccHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHccccccccccEEEECcccccccccccc
**********LQGIHVLAW**APPSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTSRNCVGL
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MPAQVMPETNLQGIHVLAWDDAPPSHRRLEGKVAIITGGARGIGEAAVRLFARHGAKVVIADVEDTLGSVLASTLAPAPVTFVHCDVSLEEDIENLINSTVSRYGRLDILYNNAGVLGNQRKHKSIIDFDADEFDNVMRVNVKGMALGIKHAARVMINRGGGCIISTASVAGVMGGLGPHAYTASKHAIVGLTKNAACELGRYGIRVNCISPFGVATSMLVNAWRNSGDGEEEDECMNFGIPSQKEVRKMEEFVSGLGNLKGTTLRSKDIAEAALYLASDESRYVSGHNLVVDGGVTTSRNCVGL

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Short-chain dehydrogenase reductase 2a probableQ9SCU0
Sex determination protein tasselseed-2 Required for stage-specific floral organ abortion.probableP50160
Oxidoreductase UcpA probableP0A2D1

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
1.-.-.-Oxidoreductases.probable
1.1.-.-Acting on the CH-OH group of donors.probable
1.1.1.-15-hydroxyprostaglandin dehydrogenase (NAD(+)).probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2BGK, chain A
Confidence level:very confident
Coverage over the Query: 27-226,243-299
View the alignment between query and template
View the model in PyMOL
Template: 3T7C, chain A
Confidence level:very confident
Coverage over the Query: 26-298
View the alignment between query and template
View the model in PyMOL