Citrus Sinensis ID: 021995


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300----
MAMKRVASSAINAFASSGFLRSSSRFSRHYASSGSKKIVGVFYKGNEYASMNPNFLAAAAAGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPHVSGTTIDAQLRYAAGVKDMLDRYFKGEDFPVQNYIVKAGELAPQYR
ccccHHHHHHHHccccEEEEEccccccHHHHccccccEEEEEECccccccccccHHHHHHcccEEEcccccHHHHHHHHHHHHHHHHHHccHHHHHHHHcccccccccccccccccccEEEEEcccHHHHHHHHHHcccccEEEEEccccccHHHHHHcccEEcccHHHHcccccEEEEccccccHccccccHHHHHccccccEEEEccccccccHHHHHHHHHccccEEEEEcccccccccccccccccccEECccccccccHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccc
******A*SAINAFASSGFLRSSSRFSRHYASSGSKKIVGVFYKGNEYASMNPNFLAAAAAGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPHVSGTTIDAQLRYAAGVKDMLDRYFKGEDFPVQNYIVKAG*******
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MAMKRVASSAINAFASSGFLRSSSRFSRHYASSGSKKIVGVFYKGNEYASMNPNFLAAAAAGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYRAYDLEGKTVGTVGCGRIGKLLLQRLKPFNCNLLYHDRVKMDPQLEKETGAKFEEDLDTMLPKCDIVVVNTPLTEKTRGMFDKDRIAKMKKGVLIVNNARGAIMDTQAVVDACSSGHIAGYSGDVWNPQPAPKDHPWRYMPNQAMTPHVSGTTIDAQLRYAAGVKDMLDRYFKGEDFPVQNYIVKAGELAPQYR

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Formate dehydrogenase 1, mitochondrial probableQ9SXP2
Formate dehydrogenase, mitochondrial probableQ9S7E4
Formate dehydrogenase, mitochondrial Involved in formate-dependent oxygen uptake coupled to ATP synthesis.probableQ07511

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
1.-.-.-Oxidoreductases.probable
1.2.-.-Acting on the aldehyde or oxo group of donors.probable
1.2.1.-With NAD(+) or NADP(+) as acceptor.probable
1.2.1.22-hydroxymethylglutarate dehydrogenase.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3JTM, chain A
Confidence level:very confident
Coverage over the Query: 24-304
View the alignment between query and template
View the model in PyMOL
Template: 4H31, chain A
Confidence level:probable
Coverage over the Query: 2-91,111-209
View the alignment between query and template
View the model in PyMOL