Citrus Sinensis ID: 022024

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300----
MVFPYMEAVVGFMILMYFFETYLDLRQHAALKLPKLPKTLEGVISQEKFEKSRGYSLDKSHFHFVHEFVTILMDSAILLFRILPWFWKKSGNFLVLVGLDAENEILHTLSFLAGVMLWSQLTDLPFSLYSTFVIEARHGFNKQTIWLFFRDMIKGMILAIVLGPPIVSAIIIIVQKGGPYLAIYLWAFMFVLSLVMMTLYPVLIAPLFNKFTPLPEGELREKIEKLASSLKFPLKKLFVVDGSTRSSHSNAYMYGFFKNKRIVLYDTLIQQCKNDEEIVAVIAHELGHWKLNHTMYSFIAVQVC
ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHcccccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHccHHHccccccccccccHHHHHHHHHHHHHccccccccEEEEcccccccccEEEEccccccEEEEEEHHHHHcccHHHHHHHHHHHHHHHHHccHHHHHHHHHcc
cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHcccccHEEEEEEEHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHccccccEEEEEEccccccccccEEcccccccEEEEEHHHHHHccccHHHHHHHHHHHccHHcccHHHHEEEEEcc
MVFPYMEAVVGFMILMYFFETYLDLRQHAAlklpklpktlegviSQEKfeksrgysldkshfHFVHEFVTILMDSAILLFRILPWFWKKSGNFLVLVGLDAENEILHTLSFLAGVMLWSQltdlpfslYSTFVIEARHGFNKQTIWLFFRDMIKGMILAIVLGPPIVSAIIIIVQKGGPYLAIYLWAFMFVLSLVMMTLYPVLiaplfnkftplpegeLREKIEKLASSlkfplkklfvvdgstrsshsnaymygffknkRIVLYDTLIQQCKNDEEIVAVIAHELGHWKLNHTMYSFIAVQVC
MVFPYMEAVVGFMILMYFFETYLDLRQHAALKLPKLPKTLEGVISQEKFEKSRGYSLDKSHFHFVHEFVTILMDSAILLFRILPWFWKKSGNFLVLVGLDAENEILHTLSFLAGVMLWSQLTDLPFSLYSTFVIEARHGFNKQTIWLFFRDMIKGMILAIVLGPPIVSAIIIIVQKGGPYLAIYLWAFMFVLSLVMMTLYPVLIAPLFNKFTPLPEGELREKIEKLASSLKFPLKKLFVVDGSTRSSHSNAYMYGFFKNKRIVLYDTLIQQCKNDEEIVAVIAHELGHWKLNHTMYSFIAVQVC
MVFPYMEAVVGFMILMYFFETYLDLRQHaalklpklpkTLEGVISQEKFEKSRGYSLDKSHFHFVHEFVTILMDSAILLFRILPWFWKKSGNFLVLVGLDAENEILHTLSFLAGVMLWSQLTDLPFSLYSTFVIEARHGFNKQTIWLFFRDMIKGMILAIVLGPPIVSAIIIIVQKGGPYLAIYLWAFMFVLSLVMMTLYPVLIAPLFNKFTPLPEGELREKIEKLASSLKFPLKKLFVVDGSTRSSHSNAYMYGFFKNKRIVLYDTLIQQCKNDEEIVAVIAHELGHWKLNHTMYSFIAVQVC
**FPYMEAVVGFMILMYFFETYLDLRQHAALKLPKLPKTLEGVISQEKFEKSRGYSLDKSHFHFVHEFVTILMDSAILLFRILPWFWKKSGNFLVLVGLDAENEILHTLSFLAGVMLWSQLTDLPFSLYSTFVIEARHGFNKQTIWLFFRDMIKGMILAIVLGPPIVSAIIIIVQKGGPYLAIYLWAFMFVLSLVMMTLYPVLIAPLFNKFTPLPEGELREKIEKLASSLKFPLKKLFVVDGSTRSSHSNAYMYGFFKNKRIVLYDTLIQQCKNDEEIVAVIAHELGHWKLNHTMYSFIAVQV*
MVFPYMEAVVGFMILMYFFETYLDLRQHAALKLPKLPKTLEGVISQEKFEKSRGYSLDKSHFHFVHEFVTILMDSAILLFRILPWFWKKSGNFLVLVGLDAENEILHTLSFLAGVMLWSQLTDLPFSLYSTFVIEARHGFNKQTIWLFFRDMIKGMILAIVLGPPIVSAIIIIVQKGGPYLAIYLWAFMFVLSLVMMTLYPVLIAPLFNKFTPLPEGELREKIEKLASSLKFPLKKLFVVDGSTRSSHSNAYMYGFFKNKRIVLYDTLIQQCKNDEEIVAVIAHELGHWKLNHTMYSFIAVQVC
MVFPYMEAVVGFMILMYFFETYLDLRQHAALKLPKLPKTLEGVISQEKFEKSRGYSLDKSHFHFVHEFVTILMDSAILLFRILPWFWKKSGNFLVLVGLDAENEILHTLSFLAGVMLWSQLTDLPFSLYSTFVIEARHGFNKQTIWLFFRDMIKGMILAIVLGPPIVSAIIIIVQKGGPYLAIYLWAFMFVLSLVMMTLYPVLIAPLFNKFTPLPEGELREKIEKLASSLKFPLKKLFVVDGSTRSSHSNAYMYGFFKNKRIVLYDTLIQQCKNDEEIVAVIAHELGHWKLNHTMYSFIAVQVC
MVFPYMEAVVGFMILMYFFETYLDLRQHAALKLPKLPKTLEGVISQEKFEKSRGYSLDKSHFHFVHEFVTILMDSAILLFRILPWFWKKSGNFLVLVGLDAENEILHTLSFLAGVMLWSQLTDLPFSLYSTFVIEARHGFNKQTIWLFFRDMIKGMILAIVLGPPIVSAIIIIVQKGGPYLAIYLWAFMFVLSLVMMTLYPVLIAPLFNKFTPLPEGELREKIEKLASSLKFPLKKLFVVDGSTRSSHSNAYMYGFFKNKRIVLYDTLIQQCKNDEEIVAVIAHELGHWKLNHTMYSFIAVQVC
oooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MVFPYMEAVVGFMILMYFFETYLDLRQHAALKLPKLPKTLEGVISQEKFEKSRGYSLDKSHFHFVHEFVTILMDSAILLFRILPWFWKKSGNFLVLVGLDAENEILHTLSFLAGVMLWSQLTDLPFSLYSTFVIEARHGFNKQTIWLFFRDMIKGMILAIVLGPPIVSAIIIIVQKGGPYLAIYLWAFMFVLSLVMMTLYPVLIAPLFNKFTPLPEGELREKIEKLASSLKFPLKKLFVVDGSTRSSHSNAYMYGFFKNKRIVLYDTLIQQCKNDEEIVAVIAHELGHWKLNHTMYSFIAVQVC
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query304 2.2.26 [Sep-21-2011]
Q8RX88 424 CAAX prenyl protease 1 ho yes no 0.996 0.714 0.864 1e-155
Q6EPN8 425 CAAX prenyl protease 1 ho yes no 0.996 0.712 0.811 1e-141
Q80W54 475 CAAX prenyl protease 1 ho yes no 0.986 0.631 0.437 3e-71
O75844 475 CAAX prenyl protease 1 ho yes no 0.970 0.621 0.449 1e-70
Q54FH7 426 CAAX prenyl protease 1 ho yes no 0.953 0.680 0.400 6e-54
Q10071 474 Probable CAAX prenyl prot yes no 0.970 0.622 0.391 3e-53
P47154 453 CAAX prenyl protease 1 OS yes no 0.950 0.637 0.425 4e-53
P40769 426 Uncharacterized metallopr yes no 0.611 0.436 0.281 4e-16
A1RT82 347 Protease HtpX homolog OS= yes no 0.401 0.351 0.335 6e-07
Q8ZT30 347 Protease HtpX homolog OS= yes no 0.345 0.302 0.295 0.0002
>sp|Q8RX88|FACE1_ARATH CAAX prenyl protease 1 homolog OS=Arabidopsis thaliana GN=FACE1 PE=1 SV=1 Back     alignment and function desciption
 Score =  546 bits (1407), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 262/303 (86%), Positives = 280/303 (92%)

Query: 1   MVFPYMEAVVGFMILMYFFETYLDLRQHAALKLPKLPKTLEGVISQEKFEKSRGYSLDKS 60
           M  P+ME VVGFMI+MY FETYLDLRQ  ALKLP LPKTL GVISQEKFEKSR YSLDKS
Sbjct: 1   MAIPFMETVVGFMIVMYIFETYLDLRQLTALKLPTLPKTLVGVISQEKFEKSRAYSLDKS 60

Query: 61  HFHFVHEFVTILMDSAILLFRILPWFWKKSGNFLVLVGLDAENEILHTLSFLAGVMLWSQ 120
           +FHFVHEFVTILMDSAIL F ILPWFWK SG  L  +GLD ENEILHTLSFLAGVM WSQ
Sbjct: 61  YFHFVHEFVTILMDSAILFFGILPWFWKMSGAVLPRLGLDPENEILHTLSFLAGVMTWSQ 120

Query: 121 LTDLPFSLYSTFVIEARHGFNKQTIWLFFRDMIKGMILAIVLGPPIVSAIIIIVQKGGPY 180
           +TDLPFSLYSTFVIE+RHGFNKQTIW+F RDMIKG  L+++LGPPIV+AII IVQKGGPY
Sbjct: 121 ITDLPFSLYSTFVIESRHGFNKQTIWMFIRDMIKGTFLSVILGPPIVAAIIFIVQKGGPY 180

Query: 181 LAIYLWAFMFVLSLVMMTLYPVLIAPLFNKFTPLPEGELREKIEKLASSLKFPLKKLFVV 240
           LAIYLWAFMF+LSLVMMT+YPVLIAPLFNKFTPLP+G+LREKIEKLASSLKFPLKKLFVV
Sbjct: 181 LAIYLWAFMFILSLVMMTIYPVLIAPLFNKFTPLPDGDLREKIEKLASSLKFPLKKLFVV 240

Query: 241 DGSTRSSHSNAYMYGFFKNKRIVLYDTLIQQCKNDEEIVAVIAHELGHWKLNHTMYSFIA 300
           DGSTRSSHSNAYMYGFFKNKRIVLYDTLIQQCKN++EIVAVIAHELGHWKLNHT YSFIA
Sbjct: 241 DGSTRSSHSNAYMYGFFKNKRIVLYDTLIQQCKNEDEIVAVIAHELGHWKLNHTTYSFIA 300

Query: 301 VQV 303
           VQ+
Sbjct: 301 VQI 303
Proteolytically removes the C-terminal three residues of farnesylated proteins. The substrate specificity is only partially overlaping with that of FACE2.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 4EC: .EC: 2EC: 4EC: .EC: 8EC: 4
>sp|Q6EPN8|FACE1_ORYSJ CAAX prenyl protease 1 homolog OS=Oryza sativa subsp. japonica GN=FACE1 PE=2 SV=1 Back     alignment and function description
>sp|Q80W54|FACE1_MOUSE CAAX prenyl protease 1 homolog OS=Mus musculus GN=Zmpste24 PE=1 SV=2 Back     alignment and function description
>sp|O75844|FACE1_HUMAN CAAX prenyl protease 1 homolog OS=Homo sapiens GN=ZMPSTE24 PE=1 SV=2 Back     alignment and function description
>sp|Q54FH7|FACE1_DICDI CAAX prenyl protease 1 homolog OS=Dictyostelium discoideum GN=zmpste24 PE=3 SV=1 Back     alignment and function description
>sp|Q10071|STE24_SCHPO Probable CAAX prenyl protease 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC3H1.05 PE=3 SV=1 Back     alignment and function description
>sp|P47154|STE24_YEAST CAAX prenyl protease 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=STE24 PE=1 SV=1 Back     alignment and function description
>sp|P40769|YHFN_BACSU Uncharacterized metalloprotease YhfN OS=Bacillus subtilis (strain 168) GN=yhfN PE=3 SV=2 Back     alignment and function description
>sp|A1RT82|HTPX_PYRIL Protease HtpX homolog OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=htpX PE=3 SV=1 Back     alignment and function description
>sp|Q8ZT30|HTPX_PYRAE Protease HtpX homolog OS=Pyrobaculum aerophilum (strain ATCC 51768 / IM2 / DSM 7523 / JCM 9630 / NBRC 100827) GN=htpX PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query304
449432124 424 PREDICTED: CAAX prenyl protease 1 homolo 0.996 0.714 0.907 1e-162
224067924 424 predicted protein [Populus trichocarpa] 0.996 0.714 0.914 1e-162
449480231 424 PREDICTED: CAAX prenyl protease 1 homolo 0.996 0.714 0.904 1e-161
225454328 424 PREDICTED: CAAX prenyl protease 1 homolo 0.996 0.714 0.891 1e-160
224130374 424 predicted protein [Populus trichocarpa] 0.996 0.714 0.907 1e-160
255541686 424 caax prenyl protease ste24, putative [Ri 0.996 0.714 0.891 1e-160
356568433 424 PREDICTED: CAAX prenyl protease 1 homolo 0.996 0.714 0.851 1e-155
356531957 424 PREDICTED: CAAX prenyl protease 1 homolo 0.996 0.714 0.844 1e-154
357507535 426 CAAX prenyl protease-like protein [Medic 0.996 0.711 0.844 1e-154
18411603 424 CAAX prenyl protease 1-like protein [Ara 0.996 0.714 0.864 1e-153
>gi|449432124|ref|XP_004133850.1| PREDICTED: CAAX prenyl protease 1 homolog [Cucumis sativus] Back     alignment and taxonomy information
 Score =  576 bits (1485), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 275/303 (90%), Positives = 291/303 (96%)

Query: 1   MVFPYMEAVVGFMILMYFFETYLDLRQHAALKLPKLPKTLEGVISQEKFEKSRGYSLDKS 60
           M FPYMEAVVGFMILMY FETYLDLRQH ALKLP LPKTLEGVISQEKFEKSR YSLDKS
Sbjct: 1   MEFPYMEAVVGFMILMYTFETYLDLRQHTALKLPTLPKTLEGVISQEKFEKSRAYSLDKS 60

Query: 61  HFHFVHEFVTILMDSAILLFRILPWFWKKSGNFLVLVGLDAENEILHTLSFLAGVMLWSQ 120
           HFHFVHEFVTI+MDSAIL F +LPWFWKKSG F+V VGL+AENEILHTL+FLAGVM+WSQ
Sbjct: 61  HFHFVHEFVTIVMDSAILFFGVLPWFWKKSGEFVVFVGLNAENEILHTLAFLAGVMIWSQ 120

Query: 121 LTDLPFSLYSTFVIEARHGFNKQTIWLFFRDMIKGMILAIVLGPPIVSAIIIIVQKGGPY 180
           +TDLPFSLYSTFVIE+RHGFNKQTIWLFFRDMIKG++L+I+LGPPIVSAIIIIVQKGGPY
Sbjct: 121 VTDLPFSLYSTFVIESRHGFNKQTIWLFFRDMIKGILLSILLGPPIVSAIIIIVQKGGPY 180

Query: 181 LAIYLWAFMFVLSLVMMTLYPVLIAPLFNKFTPLPEGELREKIEKLASSLKFPLKKLFVV 240
           LAIYLWAFMF LSLVMMTLYP+LIAPLFNKFTPLP G+LREKIEKLASSL FPLKKLFVV
Sbjct: 181 LAIYLWAFMFTLSLVMMTLYPILIAPLFNKFTPLPSGDLREKIEKLASSLNFPLKKLFVV 240

Query: 241 DGSTRSSHSNAYMYGFFKNKRIVLYDTLIQQCKNDEEIVAVIAHELGHWKLNHTMYSFIA 300
           DGSTRSSHSNAYMYGFFKNKRIVLYDTLIQQCKNDEEIVAVIAHELGHWKLNHTMYSFIA
Sbjct: 241 DGSTRSSHSNAYMYGFFKNKRIVLYDTLIQQCKNDEEIVAVIAHELGHWKLNHTMYSFIA 300

Query: 301 VQV 303
           +Q+
Sbjct: 301 IQI 303

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224067924|ref|XP_002302601.1| predicted protein [Populus trichocarpa] gi|222844327|gb|EEE81874.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449480231|ref|XP_004155836.1| PREDICTED: CAAX prenyl protease 1 homolog [Cucumis sativus] Back     alignment and taxonomy information
>gi|225454328|ref|XP_002277525.1| PREDICTED: CAAX prenyl protease 1 homolog [Vitis vinifera] gi|297745342|emb|CBI40422.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|224130374|ref|XP_002320821.1| predicted protein [Populus trichocarpa] gi|222861594|gb|EEE99136.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255541686|ref|XP_002511907.1| caax prenyl protease ste24, putative [Ricinus communis] gi|223549087|gb|EEF50576.1| caax prenyl protease ste24, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|356568433|ref|XP_003552415.1| PREDICTED: CAAX prenyl protease 1 homolog [Glycine max] Back     alignment and taxonomy information
>gi|356531957|ref|XP_003534542.1| PREDICTED: CAAX prenyl protease 1 homolog [Glycine max] Back     alignment and taxonomy information
>gi|357507535|ref|XP_003624056.1| CAAX prenyl protease-like protein [Medicago truncatula] gi|355499071|gb|AES80274.1| CAAX prenyl protease-like protein [Medicago truncatula] Back     alignment and taxonomy information
>gi|18411603|ref|NP_567212.1| CAAX prenyl protease 1-like protein [Arabidopsis thaliana] gi|75303258|sp|Q8RX88.1|FACE1_ARATH RecName: Full=CAAX prenyl protease 1 homolog; AltName: Full=Farnesylated proteins-converting enzyme 1; Short=AtFACE-1; Short=FACE-1; AltName: Full=Prenyl protein-specific endoprotease 1; AltName: Full=Zinc metalloproteinase Ste24 homolog; Short=AtSTE24 gi|19699057|gb|AAL90896.1| AT4g01320/F2N1_21 [Arabidopsis thaliana] gi|30102490|gb|AAP21163.1| At4g01320/F2N1_21 [Arabidopsis thaliana] gi|332656608|gb|AEE82008.1| CAAX prenyl protease 1-like protein [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query304
TAIR|locus:2124983 424 ATSTE24 [Arabidopsis thaliana 0.996 0.714 0.838 1.2e-136
RGD|1305570 475 Zmpste24 "zinc metallopeptidas 0.884 0.566 0.470 2.3e-70
MGI|MGI:1890508 475 Zmpste24 "zinc metallopeptidas 0.884 0.566 0.467 2.9e-70
UNIPROTKB|F1PY82 473 ZMPSTE24 "Uncharacterized prot 0.868 0.558 0.479 4.7e-70
UNIPROTKB|E1BMF2 475 ZMPSTE24 "Uncharacterized prot 0.868 0.555 0.479 6e-70
UNIPROTKB|O75844 475 ZMPSTE24 "CAAX prenyl protease 0.868 0.555 0.483 6e-70
ZFIN|ZDB-GENE-030131-6312 468 zmpste24 "zinc metallopeptidas 0.865 0.561 0.477 1.8e-68
UNIPROTKB|F1NDA2 468 ZMPSTE24 "Uncharacterized prot 0.865 0.561 0.473 9.8e-68
CGD|CAL0000665 456 STE24 [Candida albicans (taxid 0.934 0.622 0.456 1.6e-61
UNIPROTKB|Q59UR6 456 STE24 "Potential a-factor pher 0.934 0.622 0.456 1.6e-61
TAIR|locus:2124983 ATSTE24 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1338 (476.1 bits), Expect = 1.2e-136, P = 1.2e-136
 Identities = 254/303 (83%), Positives = 272/303 (89%)

Query:     1 MVFPYMEAVVGFMILMYFFETYLDLRQHXXXXXXXXXXTLEGVISQEKFEKSRGYSLDKS 60
             M  P+ME VVGFMI+MY FETYLDLRQ           TL GVISQEKFEKSR YSLDKS
Sbjct:     1 MAIPFMETVVGFMIVMYIFETYLDLRQLTALKLPTLPKTLVGVISQEKFEKSRAYSLDKS 60

Query:    61 HFHFVHEFVTILMDSAILLFRILPWFWKKSGNFLVLVGLDAENEILHTLSFLAGVMLWSQ 120
             +FHFVHEFVTILMDSAIL F ILPWFWK SG  L  +GLD ENEILHTLSFLAGVM WSQ
Sbjct:    61 YFHFVHEFVTILMDSAILFFGILPWFWKMSGAVLPRLGLDPENEILHTLSFLAGVMTWSQ 120

Query:   121 LTDLPFSLYSTFVIEARHGFNKQTIWLFFRDMIKGMILAIVLGPPIVSAIIIIVQKGGPY 180
             +TDLPFSLYSTFVIE+RHGFNKQTIW+F RDMIKG  L+++LGPPIV+AII IVQKGGPY
Sbjct:   121 ITDLPFSLYSTFVIESRHGFNKQTIWMFIRDMIKGTFLSVILGPPIVAAIIFIVQKGGPY 180

Query:   181 LAIYLWAFMFVLSLVMMTLYPVLIAPLFNKFTPLPEGELREKIEKLASSLKFPLKKLFVV 240
             LAIYLWAFMF+LSLVMMT+YPVLIAPLFNKFTPLP+G+LREKIEKLASSLKFPLKKLFVV
Sbjct:   181 LAIYLWAFMFILSLVMMTIYPVLIAPLFNKFTPLPDGDLREKIEKLASSLKFPLKKLFVV 240

Query:   241 DGSTRSSHSNAYMYGFFKNKRIVLYDTLIQQCKNDEEIVAVIAHELGHWKLNHTMYSFIA 300
             DGSTRSSHSNAYMYGFFKNKRIVLYDTLIQQCKN++EIVAVIAHELGHWKLNHT YSFIA
Sbjct:   241 DGSTRSSHSNAYMYGFFKNKRIVLYDTLIQQCKNEDEIVAVIAHELGHWKLNHTTYSFIA 300

Query:   301 VQV 303
             VQ+
Sbjct:   301 VQI 303
GO:0004222 "metalloendopeptidase activity" evidence=IEA;ISS
GO:0006508 "proteolysis" evidence=IEA;IDA
GO:0004175 "endopeptidase activity" evidence=IDA
GO:0005783 "endoplasmic reticulum" evidence=IDA
GO:0080120 "CAAX-box protein maturation" evidence=IDA
GO:0005773 "vacuole" evidence=IDA
GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=RCA
GO:0051604 "protein maturation" evidence=RCA
RGD|1305570 Zmpste24 "zinc metallopeptidase STE24" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
MGI|MGI:1890508 Zmpste24 "zinc metallopeptidase, STE24" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|F1PY82 ZMPSTE24 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|E1BMF2 ZMPSTE24 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|O75844 ZMPSTE24 "CAAX prenyl protease 1 homolog" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030131-6312 zmpste24 "zinc metallopeptidase, STE24 homolog" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|F1NDA2 ZMPSTE24 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
CGD|CAL0000665 STE24 [Candida albicans (taxid:5476)] Back     alignment and assigned GO terms
UNIPROTKB|Q59UR6 STE24 "Potential a-factor pheromone maturation protease" [Candida albicans SC5314 (taxid:237561)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q8RX88FACE1_ARATH3, ., 4, ., 2, 4, ., 8, 40.86460.99670.7146yesno
Q6EPN8FACE1_ORYSJ3, ., 4, ., 2, 4, ., 8, 40.81180.99670.7129yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.4.24.840.991
3rd Layer3.4.240.976

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query304
pfam01435 223 pfam01435, Peptidase_M48, Peptidase family M48 2e-33
COG0501 302 COG0501, HtpX, Zn-dependent protease with chaperon 6e-12
PRK03982 288 PRK03982, PRK03982, heat shock protein HtpX; Provi 8e-04
PTZ00029216 PTZ00029, PTZ00029, 60S ribosomal protein L10a; Pr 0.003
>gnl|CDD|216503 pfam01435, Peptidase_M48, Peptidase family M48 Back     alignment and domain information 
 Score =  122 bits (307), Expect = 2e-33
 Identities = 43/119 (36%), Positives = 64/119 (53%), Gaps = 8/119 (6%)

Query: 187 AFMFVLSLVMMTLYPVLIAPLFNKF-TPLPEGELREKIEKLASS--LKFPLKKLFVVDGS 243
           A + + SLV+ T+    IA L N F TPL    L+  +E+LA S    FP  +++VVD  
Sbjct: 1   ALLLLSSLVLATIGAPYIAQLLNGFPTPLRNARLQRVVERLADSAGAGFPPWEVYVVD-- 58

Query: 244 TRSSHSNAYMYGFFKNKRIVLYDTLIQQCKNDEEIVAVIAHELGHWKLNHTMYSFIAVQ 302
             S   NA+  G  KNKR+V+   L+     ++E+ AV+ HE+GH K  H++ S     
Sbjct: 59  --SPQPNAFALGGGKNKRVVVTTGLLL-ALTEDELAAVLGHEIGHIKARHSVESMSQGL 114

Length = 223
>gnl|CDD|223575 COG0501, HtpX, Zn-dependent protease with chaperone function [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>gnl|CDD|235186 PRK03982, PRK03982, heat shock protein HtpX; Provisional Back     alignment and domain information
>gnl|CDD|185405 PTZ00029, PTZ00029, 60S ribosomal protein L10a; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 304
KOG2719 428 consensus Metalloprotease [General function predic 100.0
PRK03001 283 M48 family peptidase; Provisional 99.96
PRK03982 288 heat shock protein HtpX; Provisional 99.95
PRK01265 324 heat shock protein HtpX; Provisional 99.92
PRK01345 317 heat shock protein HtpX; Provisional 99.9
PRK03072 288 heat shock protein HtpX; Provisional 99.9
PRK02391 296 heat shock protein HtpX; Provisional 99.9
PRK04897 298 heat shock protein HtpX; Provisional 99.89
PRK02870 336 heat shock protein HtpX; Provisional 99.88
PRK05457 284 heat shock protein HtpX; Provisional 99.84
PF01435 226 Peptidase_M48: Peptidase family M48 This is family 99.76
COG0501 302 HtpX Zn-dependent protease with chaperone function 99.66
PF05569299 Peptidase_M56: BlaR1 peptidase M56; InterPro: IPR0 99.28
COG4783 484 Putative Zn-dependent protease, contains TPR repea 99.03
COG4219 337 MecR1 Antirepressor regulating drug resistance, pr 98.75
KOG2661 424 consensus Peptidase family M48 [Posttranslational 98.47
COG4784 479 Putative Zn-dependent protease [General function p 98.43
COG1451223 Predicted metal-dependent hydrolase [General funct 97.65
PF01863205 DUF45: Protein of unknown function DUF45; InterPro 97.61
PRK04351149 hypothetical protein; Provisional 97.05
PF06114122 DUF955: Domain of unknown function (DUF955); Inter 96.16
PF1369979 DUF4157: Domain of unknown function (DUF4157) 96.06
PF04228292 Zn_peptidase: Putative neutral zinc metallopeptida 96.03
PF10026 195 DUF2268: Predicted Zn-dependent protease (DUF2268) 95.61
smart00731146 SprT SprT homologues. Predicted to have roles in t 95.58
PF10263157 SprT-like: SprT-like family; InterPro: IPR006640 T 94.6
PF12388211 Peptidase_M57: Dual-action HEIGH metallo-peptidase 93.72
PF04298 222 Zn_peptidase_2: Putative neutral zinc metallopepti 93.68
COG3091156 SprT Zn-dependent metalloprotease, SprT family [Ge 93.35
PF13203 292 DUF2201_N: Putative metallopeptidase domain 92.9
PF04450205 BSP: Peptidase of plants and bacteria; InterPro: I 92.49
PF12725318 DUF3810: Protein of unknown function (DUF3810); In 90.34
PRK04860160 hypothetical protein; Provisional 90.17
PF08325186 WLM: WLM domain; InterPro: IPR013536 The WLM (WSS1 89.65
cd04268165 ZnMc_MMP_like Zinc-dependent metalloprotease, MMP_ 89.31
COG2856 213 Predicted Zn peptidase [Amino acid transport and m 88.39
PF02031132 Peptidase_M7: Streptomyces extracellular neutral p 87.9
COG4900133 Predicted metallopeptidase [General function predi 86.36
TIGR02289 549 M3_not_pepF oligoendopeptidase, M3 family. This fa 85.02
TIGR00181 591 pepF oligoendopeptidase F. This family represents 84.51
TIGR0379377 TOMM_pelo TOMM propeptide domain. This model repre 84.27
cd04269194 ZnMc_adamalysin_II_like Zinc-dependent metalloprot 83.64
cd04279156 ZnMc_MMP_like_1 Zinc-dependent metalloprotease; MM 81.96
PF13485128 Peptidase_MA_2: Peptidase MA superfamily 80.92
cd06455 472 M3A_TOP Peptidase M3 Thimet oligopeptidase (TOP; P 80.62
PF01432 458 Peptidase_M3: Peptidase family M3 This Prosite mot 80.36
>KOG2719 consensus Metalloprotease [General function prediction only] Back     alignment and domain information 
Probab=100.00  E-value=5.9e-63  Score=469.32  Aligned_cols=295  Identities=53%  Similarity=0.896  Sum_probs=283.9

Q ss_pred             CchHHHHHHHHHHHHHHHHHHHHHHHhhhcCCC-CChhhcccCCHHHHHHHHHhhhhhhhHHHHHHHHHH-HHHHHHHHh
Q 022024            3 FPYMEAVVGFMILMYFFETYLDLRQHAALKLPK-LPKTLEGVISQEKFEKSRGYSLDKSHFHFVHEFVTI-LMDSAILLF   80 (304)
Q Consensus         3 ~~~~~~~~~~~~~~~l~~~~L~~rq~~~~~~~~-~P~~l~~~~~~e~~~k~~~Y~~~k~~~~~~~~~~~~-~~~~~~l~~   80 (304)
                      ++|+.+++++++..+.||+||+.||.+++++++ +|+++++.+|+|+++|||+|+++|.++++++...+. ...+..+++
T Consensus         6 ~~~~~~i~~f~i~~~~~~~yl~~Rq~~~~~~~~~~p~el~~~~~~et~~kar~y~~~k~~f~i~~~~~~~~~~~l~~L~~   85 (428)
T KOG2719|consen    6 MCRKSIILFFSIFLYLFETYLTERQLKVLKRTKLVPKELGGIIDQETFKKARSYERDKSIFSIFNLLLSLVLLLLLELYL   85 (428)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCchHhhcCCCHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            469999999999999999999999999998875 899999999999999999999999999999999999 899999999


Q ss_pred             chHHHHHhhhhhHHHHhccCCccchhHHHHHHHHHHHHHHhchhchhhhhhceeecccCCCCCCHHHHHHHHHHHHHHHH
Q 022024           81 RILPWFWKKSGNFLVLVGLDAENEILHTLSFLAGVMLWSQLTDLPFSLYSTFVIEARHGFNKQTIWLFFRDMIKGMILAI  160 (304)
Q Consensus        81 g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~l~~~l~~lPf~~Y~~f~le~~~g~~~~t~~~~~~d~~k~~~l~~  160 (304)
                      |.+|++|..++++..+.     .+++++++|+..++.+++++++|+++|++|++|++||+|++|.+.|++|.+|+.++++
T Consensus        86 g~~~~lw~lt~~~~~~~-----~~~~~s~vF~~~~s~~~~l~~LP~~iys~fvie~~~gfnk~t~~~~~~d~lk~~~v~~  160 (428)
T KOG2719|consen   86 GALPFLWKLTGKFLGKA-----GEIWLSLVFLLLLSIYSTLLDLPSSIYSTFVLEEKHGFNKQTLSLFIIDGLKSLLVGV  160 (428)
T ss_pred             hHHHHHHHHHHHHhhhh-----hhhhhhhHHHHHHHHHHHHHhccHHHHHHHHHHhhcCCCcCcchhHHHHHHHHHHHHH
Confidence            99999999998887663     3889999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhHhHHHHHhhcCCCCCCCchHHHHHHHHHHHHcCCCCCcEEEE
Q 022024          161 VLGPPIVSAIIIIVQKGGPYLAIYLWAFMFVLSLVMMTLYPVLIAPLFNKFTPLPEGELREKIEKLASSLKFPLKKLFVV  240 (304)
Q Consensus       161 vl~~~l~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~p~~i~plf~~~~pl~~~~L~~~i~~l~~~~g~~~~~i~v~  240 (304)
                      +++.|+.+++.++....|+++.+|+|++.++++++++.++|.+|.|+++|++|++++++++.||++|++.|+|.++++|+
T Consensus       161 ~l~~Pi~~~iv~i~~~~g~yF~i~~w~f~~v~~l~l~ti~p~~i~P~f~K~~PLe~g~l~~~Ie~la~s~gfp~~k~~vi  240 (428)
T KOG2719|consen  161 VLTIPIVAAIVMILKKFGPYFFIYLWLFYFVLSLLLLTIYPGFIAPLFGKFTPLEEGDLKEKIERLADSVGFPLSKYRVI  240 (428)
T ss_pred             HHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCCCCCCchHHHHHHHHHhcCCCceEEEEE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eCCCCCCcccEEEEccCCCCEEEEcHhHHh-h--CCCHHHHHHHHHHHHHHhhcCCHHHHHHHHHh
Q 022024          241 DGSTRSSHSNAYMYGFFKNKRIVLYDTLIQ-Q--CKNDEEIVAVIAHELGHWKLNHTMYSFIAVQV  303 (304)
Q Consensus       241 ~~s~rs~~~NA~~~G~~~~k~Ivl~d~Ll~-~--l~~~~El~aVlaHElgH~k~~H~~~~~~~~~~  303 (304)
                      |+|+|++|+|||++|+|+.||||++||++. +  + ++||+.||+|||+|||+++|..|+++++++
T Consensus       241 ~~s~rs~hsNAyfyG~~~~KRIvIyDtLl~~~~~~-~~eel~AVl~HELGHW~~~H~~K~~ii~~~  305 (428)
T KOG2719|consen  241 DGSKRSSHSNAYFYGLCKNKRIVIYDTLLLEEEHL-NNEELVAVLAHELGHWKLNHVLKNIIIMQI  305 (428)
T ss_pred             ecCCCCCCCCeeeeeccccceEEEehhhhhhhhcc-ccHHHHHHHHHHhhHHHHhhHHHHHHHHHH
Confidence            999999999999999999999999999993 2  4 789999999999999999999999999875

>PRK03001 M48 family peptidase; Provisional Back     alignment and domain information
>PRK03982 heat shock protein HtpX; Provisional Back     alignment and domain information
>PRK01265 heat shock protein HtpX; Provisional Back     alignment and domain information
>PRK01345 heat shock protein HtpX; Provisional Back     alignment and domain information
>PRK03072 heat shock protein HtpX; Provisional Back     alignment and domain information
>PRK02391 heat shock protein HtpX; Provisional Back     alignment and domain information
>PRK04897 heat shock protein HtpX; Provisional Back     alignment and domain information
>PRK02870 heat shock protein HtpX; Provisional Back     alignment and domain information
>PRK05457 heat shock protein HtpX; Provisional Back     alignment and domain information
>PF01435 Peptidase_M48: Peptidase family M48 This is family M48 in the peptidase classification Back     alignment and domain information
>COG0501 HtpX Zn-dependent protease with chaperone function [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF05569 Peptidase_M56: BlaR1 peptidase M56; InterPro: IPR008756 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>COG4783 Putative Zn-dependent protease, contains TPR repeats [General function prediction only] Back     alignment and domain information
>COG4219 MecR1 Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component [Transcription / Signal transduction mechanisms] Back     alignment and domain information
>KOG2661 consensus Peptidase family M48 [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG4784 Putative Zn-dependent protease [General function prediction only] Back     alignment and domain information
>COG1451 Predicted metal-dependent hydrolase [General function prediction only] Back     alignment and domain information
>PF01863 DUF45: Protein of unknown function DUF45; InterPro: IPR002725 Members of this family are found in some archaebacteria, as well as Helicobacter pylori Back     alignment and domain information
>PRK04351 hypothetical protein; Provisional Back     alignment and domain information
>PF06114 DUF955: Domain of unknown function (DUF955); InterPro: IPR010359 This is a family of bacterial and viral proteins with undetermined function Back     alignment and domain information
>PF13699 DUF4157: Domain of unknown function (DUF4157) Back     alignment and domain information
>PF04228 Zn_peptidase: Putative neutral zinc metallopeptidase; InterPro: IPR007343 Members of this family of bacterial proteins are described as hypothetical proteins or zinc metallopeptidases Back     alignment and domain information
>PF10026 DUF2268: Predicted Zn-dependent protease (DUF2268); InterPro: IPR018728 This domain, found in various hypothetical bacterial proteins, as well as predicted zinc dependent proteases, has no known function Back     alignment and domain information
>smart00731 SprT SprT homologues Back     alignment and domain information
>PF10263 SprT-like: SprT-like family; InterPro: IPR006640 This is a family of uncharacterised bacterial proteins which includes Escherichia coli SprT (P39902 from SWISSPROT) Back     alignment and domain information
>PF12388 Peptidase_M57: Dual-action HEIGH metallo-peptidase; InterPro: IPR024653 This entry represents the metallopeptidases M10, M27 and M57 Back     alignment and domain information
>PF04298 Zn_peptidase_2: Putative neutral zinc metallopeptidase; InterPro: IPR007395 Members of this family of bacterial proteins are described as hypothetical proteins or zinc-dependent proteases Back     alignment and domain information
>COG3091 SprT Zn-dependent metalloprotease, SprT family [General function prediction only] Back     alignment and domain information
>PF13203 DUF2201_N: Putative metallopeptidase domain Back     alignment and domain information
>PF04450 BSP: Peptidase of plants and bacteria; InterPro: IPR007541 These basic secretory proteins (BSPs) are believed to be part of the plants defence mechanism against pathogens [] Back     alignment and domain information
>PF12725 DUF3810: Protein of unknown function (DUF3810); InterPro: IPR024294 This family of bacterial proteins is functionally uncharacterised Back     alignment and domain information
>PRK04860 hypothetical protein; Provisional Back     alignment and domain information
>PF08325 WLM: WLM domain; InterPro: IPR013536 The WLM (WSS1-like metalloprotease) domain is a globular domain related to the zincin-like superfamily of Zn-dependent peptidase Back     alignment and domain information
>cd04268 ZnMc_MMP_like Zinc-dependent metalloprotease, MMP_like subfamily Back     alignment and domain information
>COG2856 Predicted Zn peptidase [Amino acid transport and metabolism] Back     alignment and domain information
>PF02031 Peptidase_M7: Streptomyces extracellular neutral proteinase (M7) family; InterPro: IPR000013 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>COG4900 Predicted metallopeptidase [General function prediction only] Back     alignment and domain information
>TIGR02289 M3_not_pepF oligoendopeptidase, M3 family Back     alignment and domain information
>TIGR00181 pepF oligoendopeptidase F Back     alignment and domain information
>TIGR03793 TOMM_pelo TOMM propeptide domain Back     alignment and domain information
>cd04269 ZnMc_adamalysin_II_like Zinc-dependent metalloprotease; adamalysin_II_like subfamily Back     alignment and domain information
>cd04279 ZnMc_MMP_like_1 Zinc-dependent metalloprotease; MMP_like sub-family 1 Back     alignment and domain information
>PF13485 Peptidase_MA_2: Peptidase MA superfamily Back     alignment and domain information
>cd06455 M3A_TOP Peptidase M3 Thimet oligopeptidase (TOP; PZ-peptidase; endo-oligopeptidase A; endopeptidase 24 Back     alignment and domain information
>PF01432 Peptidase_M3: Peptidase family M3 This Prosite motif covers only the active site Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query304
4aw6_A 482 Crystal Structure Of The Human Nuclear Membrane Zin 2e-69
2ypt_A 482 Crystal Structure Of The Human Nuclear Membrane Zin 9e-69
4il3_A 461 Crystal Structure Of S. Mikatae Ste24p Length = 461 6e-56
>pdb|4AW6|A Chain A, Crystal Structure Of The Human Nuclear Membrane Zinc Metalloprotease Zmpste24 (Face1) Length = 482 Back     alignment and structure 
Iteration: 1

 Score =  258 bits (660), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 147/334 (44%), Positives = 195/334 (58%), Gaps = 39/334 (11%)
Query: 8   AVVGFMILMYFFETYLDLRQHXXXXXXXXXX-TLEGVISQEKFEKSRGYSLDKSHFHFVH 66
           AV+ F   +Y +ET+L  RQ             L  ++  E FEKSR Y LDKS F F  
Sbjct: 22  AVLLFSWTVYLWETFLAQRQRRIYKTTTHVPPELGQIMDSETFEKSRLYQLDKSTFSFWS 81
Query: 67  EFVTILMDSAILLFRILPWFWKKSGNFLVLVGLDAENEILHTLSFLAGVMLWSQLTDLPF 126
              +    + ILLF  +P+ W+ SG F    G   E EI  +L FL    L+S L  LP+
Sbjct: 82  GLYSETEGTLILLFGGIPYLWRLSGRFCGYAGFGPEYEITQSLVFLLLATLFSALAGLPW 141
Query: 127 SLYSTFVIEARHGFNKQTIWLFFRDMIKGMILAIVLGPPIVSAIIIIVQKGGPYLAIYLW 186
           SLY+TFVIE +HGFN+QT+  F +D IK  ++   +  P+ S ++ I++ GG Y  IY W
Sbjct: 142 SLYNTFVIEEKHGFNQQTLGFFMKDAIKKFVVTQCILLPVSSLLLYIIKIGGDYFFIYAW 201
Query: 187 AFMFVLSLVMMTLYPVLIAPLFNKFTPLPEGELREKIEKLASSLKFPLKKLFVVDGSTRS 246
            F  V+SLV++T+Y   IAPLF+KFTPLPEG+L+E+IE +A S+ FPL K++VV+GS RS
Sbjct: 202 LFTLVVSLVLVTIYADYIAPLFDKFTPLPEGKLKEEIEVMAKSIDFPLTKVYVVEGSKRS 261
Query: 247 SHSNAYMYGFFKNKRIVLYDTLI------------------------------------- 269
           SHSNAY YGFFKNKRIVL+DTL+                                     
Sbjct: 262 SHSNAYFYGFFKNKRIVLFDTLLEEYSVLNKDIQEDSGMEPRNEEEGNSEEIKAKVKNKK 321
Query: 270 QQCKNDEEIVAVIAHELGHWKLNHTMYSFIAVQV 303
           Q CKN EE++AV+ HELGHWKL HT+ + I  Q+
Sbjct: 322 QGCKN-EEVLAVLGHELGHWKLGHTVKNIIISQM 354
>pdb|2YPT|A Chain A, Crystal Structure Of The Human Nuclear Membrane Zinc Metalloprotease Zmpste24 Mutant (E336a) In Complex With A Synthetic Csim Tetrapeptide From The C-Terminus Of Prelamin A Length = 482 Back     alignment and structure
>pdb|4IL3|A Chain A, Crystal Structure Of S. Mikatae Ste24p Length = 461 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query304
4aw6_A 482 CAAX prenyl protease 1 homolog; hydrolase, M48 pep 3e-67
3cqb_A107 Probable protease HTPX homolog; heat shock protein 2e-05
>4aw6_A CAAX prenyl protease 1 homolog; hydrolase, M48 peptidase, integral membrane protein, prelami processing, ageing, progeria; HET: PC1; 3.40A {Homo sapiens} Length = 482 Back     alignment and structure
 Score =  216 bits (551), Expect = 3e-67
 Identities = 145/334 (43%), Positives = 197/334 (58%), Gaps = 37/334 (11%)

Query: 8   AVVGFMILMYFFETYLDLRQHAALKLP-KLPKTLEGVISQEKFEKSRGYSLDKSHFHFVH 66
           AV+ F   +Y +ET+L  RQ    K    +P  L  ++  E FEKSR Y LDKS F F  
Sbjct: 22  AVLLFSWTVYLWETFLAQRQRRIYKTTTHVPPELGQIMDSETFEKSRLYQLDKSTFSFWS 81

Query: 67  EFVTILMDSAILLFRILPWFWKKSGNFLVLVGLDAENEILHTLSFLAGVMLWSQLTDLPF 126
              +    + ILLF  +P+ W+ SG F    G   E EI  +L FL    L+S L  LP+
Sbjct: 82  GLYSETEGTLILLFGGIPYLWRLSGRFCGYAGFGPEYEITQSLVFLLLATLFSALAGLPW 141

Query: 127 SLYSTFVIEARHGFNKQTIWLFFRDMIKGMILAIVLGPPIVSAIIIIVQKGGPYLAIYLW 186
           SLY+TFVIE +HGFN+QT+  F +D IK  ++   +  P+ S ++ I++ GG Y  IY W
Sbjct: 142 SLYNTFVIEEKHGFNQQTLGFFMKDAIKKFVVTQCILLPVSSLLLYIIKIGGDYFFIYAW 201

Query: 187 AFMFVLSLVMMTLYPVLIAPLFNKFTPLPEGELREKIEKLASSLKFPLKKLFVVDGSTRS 246
            F  V+SLV++T+Y   IAPLF+KFTPLPEG+L+E+IE +A S+ FPL K++VV+GS RS
Sbjct: 202 LFTLVVSLVLVTIYADYIAPLFDKFTPLPEGKLKEEIEVMAKSIDFPLTKVYVVEGSKRS 261

Query: 247 SHSNAYMYGFFKNKRIVLYDTLIQQCK--------------------------------- 273
           SHSNAY YGFFKNKRIVL+DTL+++                                   
Sbjct: 262 SHSNAYFYGFFKNKRIVLFDTLLEEYSVLNKDIQEDSGMEPRNEEEGNSEEIKAKVKNKK 321

Query: 274 ---NDEEIVAVIAHELGHWKLNHTMYSFIAVQVC 304
               +EE++AV+ HELGHWKL HT+ + I  Q+ 
Sbjct: 322 QGCKNEEVLAVLGHELGHWKLGHTVKNIIISQMN 355
>3cqb_A Probable protease HTPX homolog; heat shock protein HTPX domain, PSI-2, protein structure INI structural genomics; HET: MSE; 1.86A {Vibrio parahaemolyticus rimd 2210633} Length = 107 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query304
4aw6_A 482 CAAX prenyl protease 1 homolog; hydrolase, M48 pep 100.0
3cqb_A107 Probable protease HTPX homolog; heat shock protein 99.76
3c37_A 253 Peptidase, M48 family; Q74D82, GSR143A, structural 99.71
3dte_A 301 IRRE protein; radiotolerance, gene regulation, met 95.43
1uze_A 589 Angiotensin converting enzyme; metalloprotease, in 85.39
3ahn_A 564 Oligopeptidase, PZ peptidase A; hydrolase, hydrola 83.69
1r42_A 615 Angiotensin I converting enzyme 2; zinc metallopep 82.1
>4aw6_A CAAX prenyl protease 1 homolog; hydrolase, M48 peptidase, integral membrane protein, prelami processing, ageing, progeria; HET: PC1; 3.40A {Homo sapiens} PDB: 2ypt_A Back     alignment and structure
Probab=100.00  E-value=4.7e-73  Score=556.55  Aligned_cols=298  Identities=49%  Similarity=0.866  Sum_probs=279.7

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhhhcCC-CCChhhcccCCHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHhchH
Q 022024            5 YMEAVVGFMILMYFFETYLDLRQHAALKLP-KLPKTLEGVISQEKFEKSRGYSLDKSHFHFVHEFVTILMDSAILLFRIL   83 (304)
Q Consensus         5 ~~~~~~~~~~~~~l~~~~L~~rq~~~~~~~-~~P~~l~~~~~~e~~~k~~~Y~~~k~~~~~~~~~~~~~~~~~~l~~g~~   83 (304)
                      ...++++++++.++||.||++||+|+++++ ++|+++++++|+|+|+||++|+++|.++++++++++.+..++++++|++
T Consensus        19 ~~~~il~~~~~~~~~e~yL~~RQ~~~~~~~~~vP~~l~~~~~~e~f~ka~~Y~~~k~~f~~~~~~~~~i~~~~~l~~g~~   98 (482)
T 4aw6_A           19 IFGAVLLFSWTVYLWETFLAQRQRRIYKTTTHVPPELGQIMDSETFEKSRLYQLDKSTFSFWSGLYSETEGTLILLFGGI   98 (482)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSCCSGGGTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhH
Confidence            456899999999999999999999998764 8999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhhhhHHHHhccCCccchhHHHHHHHHHHHHHHhchhchhhhhhceeecccCCCCCCHHHHHHHHHHHHHHHHHHH
Q 022024           84 PWFWKKSGNFLVLVGLDAENEILHTLSFLAGVMLWSQLTDLPFSLYSTFVIEARHGFNKQTIWLFFRDMIKGMILAIVLG  163 (304)
Q Consensus        84 ~~l~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~l~~~l~~lPf~~Y~~f~le~~~g~~~~t~~~~~~d~~k~~~l~~vl~  163 (304)
                      |++|++++++....+.++.++++++++|+++++++++++++||++|++|++|+|||||+||++.|++|++|+.+++.+++
T Consensus        99 ~~lw~~~~~~~~~~~~~~~~~i~~s~~f~~~~~l~~~l~~LP~~~Y~tfvle~~~Gfnk~t~~~f~~D~~k~~~l~~vi~  178 (482)
T 4aw6_A           99 PYLWRLSGRFCGYAGFGPEYEITQSLVFLLLATLFSALAGLPWSLYNTFVIEEKHGFNQQTLGFFMKDAIKKFVVTQCIL  178 (482)
T ss_dssp             HHHHHHTCC--------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHTTCBCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHhHHHHHHheeehhhcCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            99999888776665433357899999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhHhHHHHHhhcCCCCCCCchHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 022024          164 PPIVSAIIIIVQKGGPYLAIYLWAFMFVLSLVMMTLYPVLIAPLFNKFTPLPEGELREKIEKLASSLKFPLKKLFVVDGS  243 (304)
Q Consensus       164 ~~l~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~p~~i~plf~~~~pl~~~~L~~~i~~l~~~~g~~~~~i~v~~~s  243 (304)
                      .|++++++|++++.|++||+|+|++.+++++++++++|.+|.|+|||++|++|++|+++++++|++.|+|.+++||+|+|
T Consensus       179 ~pl~~~~~~ii~~~g~~~wl~~w~~~~~~~l~~~~iyP~~I~PLfnk~~Pl~dg~L~~~Ie~la~~~~fp~~~v~vv~gS  258 (482)
T 4aw6_A          179 LPVSSLLLYIIKIGGDYFFIYAWLFTLVVSLVLVTIYADYIAPLFDKFTPLPEGKLKEEIEVMAKSIDFPLTKVYVVEGS  258 (482)
T ss_dssp             HHHHHHHHHHHHHSCSSHHHHHHHHHHHHHHHHHHHHHHHTHHHHSCEEECCSSHHHHHHHHHHHHTTCCEEEEEEECGG
T ss_pred             HHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccCCcHHHHHHHHHHHHHcCCCCCcEEEEeCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCcccEEEEccCCCCEEEEcHhHHhh-------------------------------------CCCHHHHHHHHHHHH
Q 022024          244 TRSSHSNAYMYGFFKNKRIVLYDTLIQQ-------------------------------------CKNDEEIVAVIAHEL  286 (304)
Q Consensus       244 ~rs~~~NA~~~G~~~~k~Ivl~d~Ll~~-------------------------------------l~~~~El~aVlaHEl  286 (304)
                      ||++++|||++|++++||||++||++++                                     + ++||++||+|||+
T Consensus       259 kRs~~~NAy~~G~~~~krIVl~dtLl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~El~aVlaHEl  337 (482)
T 4aw6_A          259 KRSSHSNAYFYGFFKNKRIVLFDTLLEEYSVLNKDIQEDSGMEPRNEEEGNSEEIKAKVKNKKQGC-KNEEVLAVLGHEL  337 (482)
T ss_dssp             GTBSCCCEEEEESSSCEEEEEEHHHHC------------------------------------CCC-CHHHHHHHHHHHH
T ss_pred             CCCCCCceEEEcCCCCcEEEEEchHHHhcccccccccccccccccccccccchhhcccchhhccCC-CHHHHHHHHHHHH
Confidence            9999999999999999999999999998                                     8 9999999999999


Q ss_pred             HHhhcCCHHHHHHHHHh
Q 022024          287 GHWKLNHTMYSFIAVQV  303 (304)
Q Consensus       287 gH~k~~H~~~~~~~~~~  303 (304)
                      ||++|+|+.++++++++
T Consensus       338 gH~~~~~~~~~~~~~~i  354 (482)
T 4aw6_A          338 GHWKLGHTVKNIIISQM  354 (482)
T ss_dssp             HHHHTTHHHHHHHHHHH
T ss_pred             HHHHcccHHHHHHHHHH
Confidence            99999999999988764
>3cqb_A Probable protease HTPX homolog; heat shock protein HTPX domain, PSI-2, protein structure INI structural genomics; HET: MSE; 1.86A {Vibrio parahaemolyticus rimd 2210633} Back     alignment and structure
>3c37_A Peptidase, M48 family; Q74D82, GSR143A, structural genomics, protein structure initiative, northeast structural genomics consortium; 1.70A {Geobacter sulfurreducens pca} Back     alignment and structure
>3dte_A IRRE protein; radiotolerance, gene regulation, metallopeptidase; 2.60A {Deinococcus deserti} PDB: 3dti_A 3dtk_A Back     alignment and structure
>1uze_A Angiotensin converting enzyme; metalloprotease, inhibitor, enalaprilat, zinc dependant peptidase, anti-hypertensive drug; HET: EAL; 1.82A {Homo sapiens} SCOP: d.92.1.5 PDB: 1o8a_A* 1o86_A* 1uzf_A* 2oc2_A* 2ydm_A* 2iux_A* 2iul_A* 2xy9_A* 3bkk_A* 3bkl_A* 3l3n_A* Back     alignment and structure
>3ahn_A Oligopeptidase, PZ peptidase A; hydrolase, hydrolase-hydrolase inhibitor complex; HET: 3A1; 1.80A {Geobacillus SP} PDB: 3ahm_A* 3aho_A* 2h1n_A 2h1j_A Back     alignment and structure
>1r42_A Angiotensin I converting enzyme 2; zinc metallopeptidase domain, Na open conformation, chloride ION binding site; HET: NAG; 2.20A {Homo sapiens} SCOP: d.92.1.5 PDB: 1r4l_A* 3sci_A 3scj_A 2ajf_A* 3kbh_A* 3d0g_A* 3d0h_A* 3d0i_A* 3sck_A 3scl_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query304
d1r55a_203 ADAM33 {Human (Homo sapiens) [TaxId: 9606]} 81.01
>d1r55a_ d.92.1.9 (A:) ADAM33 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Zincin-like
superfamily: Metalloproteases ("zincins"), catalytic domain
family: Reprolysin-like
domain: ADAM33
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.01  E-value=0.36  Score=38.83  Aligned_cols=40  Identities=20%  Similarity=0.119  Sum_probs=23.6

Q ss_pred             cccEEEEccCC-CCEEEEcHhHHhhCCCHHHHHHHHHHHHHHhh
Q 022024          248 HSNAYMYGFFK-NKRIVLYDTLIQQCKNDEEIVAVIAHELGHWK  290 (304)
Q Consensus       248 ~~NA~~~G~~~-~k~Ivl~d~Ll~~l~~~~El~aVlaHElgH~k  290 (304)
                      ..-|+..|.|. .....+...  ..- ..-+...|+|||+||--
T Consensus       104 ~G~A~~g~~C~~~~~~~i~~~--~~~-~~~~~a~v~AHElGH~l  144 (203)
T d1r55a_         104 VGLAPVEGMCRAESSGGVSTD--HSE-LPIGAAATMAHEIGHSL  144 (203)
T ss_dssp             CEECCTTCTTCTTTCEEEEEC--CSS-SHHHHHHHHHHHHHHHT
T ss_pred             eeeecCCCcCCCCcceEEEEe--CCC-chhHHHHHHHHHHHHhc
Confidence            35667667763 223333221  112 45677889999999953