Citrus Sinensis ID: 022103

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300--
Protein Sequence
MKSQEPDPNYFSSSSSSSSLVSSTKWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVKSNL
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccEEEEEccccHHHHHHHHHHHHcccEEEEEEccHHHHHHHHHHHHHcccccEEEEcccccHHHHHHHHHHHHHHcccccEEEEcccccccccccccHHHHHHHHcccccHHHHHHHHHHHHHHcccccccEEEEccccccccccccHHHHHHHccccccHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHcccccEEEEEEccccccccccccccccHHHHHHHHHHHHcccccccccccEEccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccccccccccccccccEEEEcccccHHHHHHHHHHHHcccEEEEEEccHHHHHHHHHHHHccccccEEEEcccccHHHHHHHHHHHHHHHccEEEEEEccccccccHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEEEEcccccccHHHHHHHccccccHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEccccEEccccccccHHHHHHHHHcccHHHcccHHHHHcHHEEEcccccEcccc
Coil and Loop (DISEMBL)
mksqepdpnyfsssssssslvsstkwwskETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLsekglpvnffqldvsdpssIEAFVSWFKSNFAALDILVnnagvsfndiYKNTVEHAETVIRTNFYGAKlltesllplfrrspsksriLNISsrlgtlskvrnpniksiledeeLSEEQIERFVGLFLQSvkdgtwksqgwpeiwtDYAVSKLALNAYTMVLAKRyegegisvnsycpgftqtsmtqgqgshtadEAADVGARLLLlhpqqlptakfyigldpfvksnl
Flexible Loop (DISEMBL)
mksqepdpnyfsssssssslvsstkWWSKETIAIVTGANKGIGFALVKRLAELGLTViltardverGQRAVEslsekglpvnFFQLDVSDPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLplfrrspsksrilnissrlgtlskvrnpnIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTADEAADVGARLLLLHPQQLptakfyigldpfvksnl
Low Complexity Region (SEG)
MKSQEPDPNYFsssssssslvssTKWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKsiledeelseeqieRFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVKSNL
Disordered region (IsUnstruct)
***********************TKWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRR******ILNI***************************QIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQ***************ADVGARLLLLHPQQLPTAKFYIGLDPFV****
Disordered Region (DISOPRED)
************************KWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVKS**
Disordered Region (DISEMBL)
*************************WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTS************AADVGARLLLLHPQQLPTAKFYIGLDPFVKSNL
Disordered Region (DISPRO)
************************KWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MKSQEPDPNYFSSSSSSSSLVSSTKWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVKSNL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	302	2.2.26 [Sep-21-2011]
Q9M2E2	296	(+)-neomenthol dehydrogen	no	no	0.844	0.861	0.401	3e-49
A4UHT7	311	Salutaridine reductase OS	N/A	no	0.860	0.836	0.395	6e-47
Q9ZUH5	296	Short-chain dehydrogenase	no	no	0.844	0.861	0.394	7e-47
B2X050	314	(+)-neomenthol dehydrogen	N/A	no	0.844	0.812	0.356	2e-42
P16152	277	Carbonyl reductase [NADPH	yes	no	0.837	0.913	0.343	7e-39
P48758	277	Carbonyl reductase [NADPH	yes	no	0.847	0.924	0.340	8e-39
Q5RCU5	277	Carbonyl reductase [NADPH	yes	no	0.837	0.913	0.343	9e-39
Q8K354	277	Carbonyl reductase [NADPH	no	no	0.807	0.880	0.353	5e-38
Q6WAU1	314	(-)-isopiperitenone reduc	N/A	no	0.844	0.812	0.377	2e-37
Q8MI29	277	Carbonyl reductase [NADPH	N/A	no	0.804	0.877	0.346	9e-37

>sp|Q9M2E2|SDR1_ARATH (+)-neomenthol dehydrogenase OS=Arabidopsis thaliana GN=SDR1 PE=1 SV=1

 Score =  195 bits (496), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 114/284 (40%), Positives = 163/284 (57%), Gaps = 29/284 (10%)

Query: 33  AIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVN-----FFQLD 87
           A+VTGAN+GIGF + ++LA  G+ V+LT+RD  RG  AVE+L +K L ++     F QLD
Sbjct: 9   AVVTGANRGIGFEICRQLASEGIRVVLTSRDENRGLEAVETL-KKELEISDQSLLFHQLD 67

Query: 88  VSDPSSIEAFVSWFKSNFAALDILVNNAGVS-------------------FNDIYKNTVE 128
           V+DP+SI +   + K+ F  LDILVNNAG+                    +++I   T E
Sbjct: 68  VADPASITSLAEFVKTQFGKLDILVNNAGIGGIITDAEALRAGAGKEGFKWDEIITETYE 127

Query: 129 HAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILED-EE 187
             E  I+ N+YG K + E+ +PL + S S  RI+N+SS +G L  V N   K IL D E 
Sbjct: 128 LTEECIKINYYGPKRMCEAFIPLLKLSDS-PRIVNVSSSMGQLKNVLNEWAKGILSDAEN 186

Query: 188 LSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVN 247
           L+EE+I++ +   L   K+GT K + W +  + Y VSK +LN YT VLAK++      VN
Sbjct: 187 LTEERIDQVINQLLNDFKEGTVKEKNWAKFMSAYVVSKASLNGYTRVLAKKH--PEFRVN 244

Query: 248 SYCPGFTQTSMTQGQGSHTADEAADVGARLLLLHPQQLPTAKFY 291
           + CPGF +T M    G  + +E A    RL LL  Q+ P+  F+
Sbjct: 245 AVCPGFVKTDMNFKTGVLSVEEGASSPVRLALLPHQETPSGCFF 288

Involved in basal resistance against pathogens.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: 2EC: 0EC: 8

>sp|A4UHT7|SALR_PAPBR Salutaridine reductase OS=Papaver bracteatum GN=SALR PE=1 SV=1

 Score =  187 bits (476), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 118/298 (39%), Positives = 159/298 (53%), Gaps = 38/298 (12%)

Query: 28  SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLP-VNFFQL 86
           +K   A+VTG NKGIGF + K+L+  G+ V+LT RDV RG  AVE L       V F QL
Sbjct: 10  TKMRCAVVTGGNKGIGFEICKQLSSSGIMVVLTCRDVTRGLEAVEKLKNSNHENVVFHQL 69

Query: 87  DVSDP-SSIEAFVSWFKSNFAALDILVNNAGVS------------FNDIYKN-------- 125
           DV+DP +++ +   + K+ F  LDILVNNAGV+             +DI ++        
Sbjct: 70  DVTDPITTMSSLADFIKARFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEEVVKIY 129

Query: 126 -----------TVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKV 174
                      T E AE  ++ N+YG K +TE LLPL + S S  RI+N+SS  G+L  V
Sbjct: 130 EKPEAQELMSETYELAEECLKINYYGVKSVTEVLLPLLQLSDS-PRIVNVSSSTGSLKYV 188

Query: 175 RNPNIKSILED-EELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTM 233
            N     IL D + L+EE+I+  V + L+  K+   ++ GWP     Y  SK  LNAYT 
Sbjct: 189 SNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAYTR 248

Query: 234 VLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTADEAADVGARLLLLHPQQLPTAKFY 291
           VLAK+       VN  CPG  +T M  G G++TADE A    R+ L  P   P+  FY
Sbjct: 249 VLAKKI--PKFQVNCVCPGLVKTEMNYGIGNYTADEGAKHVVRIALF-PDDGPSGFFY 303

Involved in biosynthesis of morphinan-type benzylisoquinoline alkaloids. Catalyzes the stereospecific conversion of salutaridine to salutaridinol.

Papaver bracteatum (taxid: 215227)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 4

EC: 8

>sp|Q9ZUH5|SDR2B_ARATH Short-chain dehydrogenase/reductase 2b OS=Arabidopsis thaliana GN=SDR2b PE=1 SV=1

 Score =  187 bits (476), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 112/284 (39%), Positives = 164/284 (57%), Gaps = 29/284 (10%)

Query: 33  AIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVN-----FFQLD 87
           AIVTG N+GIGF + ++LA  G+ VILT+RD ++G  AVE+L +K L ++     F QLD
Sbjct: 9   AIVTGGNRGIGFEICRQLANKGIRVILTSRDEKQGLEAVETL-KKELEISDQSIVFHQLD 67

Query: 88  VSDPSSIEAFVSWFKSNFAALDILVNNAGVS-------------------FNDIYKNTVE 128
           VSDP S+ +   + K++F  LDIL+NNAGV                    + +    T E
Sbjct: 68  VSDPVSVTSLAEFVKTHFGKLDILINNAGVGGVITDVDALRAGTGKEGFKWEETITETYE 127

Query: 129 HAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILED-EE 187
            AE  I+ N+YG K + E+ +PL + S S  RI+N+SS +G +  + N   K IL D E 
Sbjct: 128 LAEECIKINYYGPKRMCEAFIPLLQLSDS-PRIINVSSFMGQVKNLVNEWAKGILSDAEN 186

Query: 188 LSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVN 247
           L+E +I++ +   L  +K+ T K++ W ++ + Y VSK  LNAYT +LAK++    I VN
Sbjct: 187 LTEVRIDQVINQLLNDLKEDTAKTKYWAKVMSAYVVSKAGLNAYTRILAKKH--PEIRVN 244

Query: 248 SYCPGFTQTSMTQGQGSHTADEAADVGARLLLLHPQQLPTAKFY 291
           S CPGF +T M    G  + +E A    RL LL  Q+ P+  F+
Sbjct: 245 SVCPGFVKTDMNFKTGILSVEEGASSPVRLALLPHQESPSGCFF 288

Arabidopsis thaliana (taxid: 3702)

>sp|B2X050|MNR1_CAPAN (+)-neomenthol dehydrogenase OS=Capsicum annuum GN=MNR1 PE=1 SV=1

 Score =  172 bits (437), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 107/300 (35%), Positives = 162/300 (54%), Gaps = 45/300 (15%)

Query: 33  AIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKG----LPVNFFQLDV 88
           A+VTG NKGIG+   ++LA  G+ V+LT+RD ++G  A+E L E+       + F QLD+
Sbjct: 11  AVVTGGNKGIGYETCRQLASKGVVVVLTSRDEKKGIEAIERLKEESNFTDEHILFHQLDI 70

Query: 89  SDPSSIEAFVSWFKSNFAALDILVNNAGVS----------FNDIYKNTV----------- 127
            DP+SI + V+  K+ F  LDIL+NNAG+S            +I +  +           
Sbjct: 71  MDPASISSLVNLIKTKFGRLDILINNAGISGVMVEGDVQVLKEILERYISIVFTEDENGE 130

Query: 128 ---------------EHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLS 172
                          E  +  I TN+YGAK +TE+ +PL + S S  RI+N++S +G L 
Sbjct: 131 EGGWTKSGPGSVTNYELTKECIETNYYGAKRMTEAFIPLLQLSNS-PRIVNVASSMGKLK 189

Query: 173 KVRNPNIKSILED-EELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAY 231
            + N     +L D + L+EE++++ V  FL+   + + +S+GWP  +T Y VSK +L AY
Sbjct: 190 LLCNKWAIEVLRDADSLTEEKVDQVVNEFLKDFTEKSTESKGWPSYFTAYKVSKASLIAY 249

Query: 232 TMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTADEAADVGARLLLLHPQQLPTAKFY 291
           T VLA +Y      +NS CPG+ +T +    GS TA E A+    L LL P   P+  F+
Sbjct: 250 TRVLATKY--PNFRINSVCPGYCKTDVNANTGSLTAGEGAESLVNLALL-PNDGPSGLFF 306

Involved in basal resistance against pathogens.

Capsicum annuum (taxid: 4072)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 0

EC: 8

>sp|P16152|CBR1_HUMAN Carbonyl reductase [NADPH] 1 OS=Homo sapiens GN=CBR1 PE=1 SV=3

 Score =  161 bits (407), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 92/268 (34%), Positives = 152/268 (56%), Gaps = 15/268 (5%)

Query: 32  IAIVTGANKGIGFALVKRLAEL-GLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSD 90
           +A+VTG NKGIG A+V+ L  L    V+LTARDV RGQ AV+ L  +GL   F QLD+ D
Sbjct: 7   VALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDD 66

Query: 91  PSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEH--AETVIRTNFYGAKLLTESL 148
             SI A   + +  +  LD+LVNNAG++F  +   T  H  AE  ++TNF+G + +   L
Sbjct: 67  LQSIRALRDFLRKEYGGLDVLVNNAGIAFK-VADPTPFHIQAEVTMKTNFFGTRDVCTEL 125

Query: 149 LPLFRRSPSKSRILNISSRLGTLS-KVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDG 207
           LPL +    + R++N+SS +   + K  +P ++     E ++EE++   +  F++  K G
Sbjct: 126 LPLIK---PQGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKG 182

Query: 208 TWKSQGWPEIWTDYAVSKLALNAYTMVLAKRY----EGEGISVNSYCPGFTQTSMTQGQG 263
             + +GWP   + Y V+K+ +   + + A++     +G+ I +N+ CPG+ +T M   + 
Sbjct: 183 VHQKEGWPS--SAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPKA 240

Query: 264 SHTADEAADVGARLLLLHPQ-QLPTAKF 290
           + + +E A+    L LL P  + P  +F
Sbjct: 241 TKSPEEGAETPVYLALLPPDAEGPHGQF 268

NADPH-dependent reductase with broad substrate specificity. Catalyzes the reduction of a wide variety of carbonyl compounds including quinones, prostaglandins, menadione, plus various xenobiotics. Catalyzes the reduction of the antitumor anthracyclines doxorubicin and daunorubicin to the cardiotoxic compounds doxorubicinol and daunorubicinol. Can convert prostaglandin E2 to prostaglandin F2-alpha. Can bind glutathione, which explains its higher affinity for glutathione-conjugated substrates. Catalyzes the reduction of S-nitrosoglutathione.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 8

EC: 9

>sp|P48758|CBR1_MOUSE Carbonyl reductase [NADPH] 1 OS=Mus musculus GN=Cbr1 PE=1 SV=3

 Score =  160 bits (406), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 93/273 (34%), Positives = 155/273 (56%), Gaps = 17/273 (6%)

Query: 28  SKETIAIVTGANKGIGFALVKRLA-ELGLTVILTARDVERGQRAVESLSEKGLPVNFFQL 86
           S   +A+VTGANKGIGFA+ + L  +    V+L ARD ERGQ AV+ L  +GL   F QL
Sbjct: 3   SSRPVALVTGANKGIGFAITRDLCRKFSGDVVLAARDEERGQTAVQKLQAEGLSPRFHQL 62

Query: 87  DVSDPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEH--AETVIRTNFYGAKLL 144
           D+ +P SI A   +    +  LD+LVNNAG++F  +  +T  H  AE  ++TNF+G + +
Sbjct: 63  DIDNPQSIRALRDFLLKEYGGLDVLVNNAGIAFK-VNDDTPFHIQAEVTMKTNFFGTRDV 121

Query: 145 TESLLPLFRRSPSKSRILNISSRLGTLSKVRNPN--IKSILEDEELSEEQIERFVGLFLQ 202
            + LLPL +    + R++N+SS + +L  ++N    ++     E ++EE++   +  F++
Sbjct: 122 CKELLPLIK---PQGRVVNVSSMV-SLRALKNCRLELQQKFRSETITEEELVGLMNKFVE 177

Query: 203 SVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRY----EGEGISVNSYCPGFTQTSM 258
             K G    +GWP   + Y V+K+ +   + +LA++      G+ I +N+ CPG+ +T M
Sbjct: 178 DTKKGVHAEEGWPN--SAYGVTKIGVTVLSRILARKLNEQRRGDKILLNACCPGWVRTDM 235

Query: 259 TQGQGSHTADEAADVGARLLLLHPQ-QLPTAKF 290
              + + + +E A+    L LL P  + P  +F
Sbjct: 236 AGPKATKSPEEGAETPVYLALLPPDAEGPHGQF 268

NADPH-dependent reductase with broad substrate specificity. Catalyzes the reduction of a wide variety of carbonyl compounds including quinones, prostaglandins, menadione, plus various xenobiotics. Catalyzes the reduction of the antitumor anthracyclines doxorubicin and daunorubicin to the cardiotoxic compounds doxorubicinol and daunorubicinol. Can convert prostaglandin E2 to prostaglandin F2-alpha. Can bind glutathione, which explains its higher affinity for glutathione-conjugated substrates. Catalyzes the reduction of S-nitrosoglutathione.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 8

EC: 9

>sp|Q5RCU5|CBR1_PONAB Carbonyl reductase [NADPH] 1 OS=Pongo abelii GN=CBR1 PE=2 SV=3

 Score =  160 bits (406), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 92/268 (34%), Positives = 152/268 (56%), Gaps = 15/268 (5%)

Query: 32  IAIVTGANKGIGFALVKRLAEL-GLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSD 90
           +A+VTG NKGIG A+V+ L  L    V+LTARDV RGQ AV+ L  +GL   F QLD+ D
Sbjct: 7   VALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVARGQAAVQQLQAEGLSPRFHQLDIDD 66

Query: 91  PSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEH--AETVIRTNFYGAKLLTESL 148
             SI A   + +  +  LD+LVNNAG++F  +   T  H  AE  ++TNF+G + +   L
Sbjct: 67  LQSIRALRDFLRKEYGGLDVLVNNAGIAFK-VADPTPFHIQAEVTMKTNFFGTRDVCTEL 125

Query: 149 LPLFRRSPSKSRILNISSRLGTLS-KVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDG 207
           LPL +    + R++N+SS +   + K  +P ++     E ++EE++   +  F++  K G
Sbjct: 126 LPLIK---PQGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKG 182

Query: 208 TWKSQGWPEIWTDYAVSKLALNAYTMVLAKRY----EGEGISVNSYCPGFTQTSMTQGQG 263
             + +GWP   + Y V+K+ +   + + A++     +G+ I +N+ CPG+ +T M   + 
Sbjct: 183 VHQKEGWPS--SAYGVTKIGVTVLSRIHARKLSEQRKGDRILLNACCPGWVRTDMAGPKA 240

Query: 264 SHTADEAADVGARLLLLHPQ-QLPTAKF 290
           + + +E A+    L LL P  + P  +F
Sbjct: 241 TKSPEEGAETPVYLALLPPDAEGPHGQF 268

NADPH-dependent reductase with broad substrate specificity. Catalyzes the reduction of a wide variety of carbonyl compounds including quinones, prostaglandins, menadione, plus various xenobiotics. Catalyzes the reduction of the antitumor anthracyclines doxorubicin and daunorubicin to the cardiotoxic compounds doxorubicinol and daunorubicinol. Can convert prostaglandin E2 to prostaglandin F2-alpha. Can bind glutathione, which explains its higher affinity for glutathione-conjugated substrates. Catalyzes the reduction of S-nitrosoglutathione.

Pongo abelii (taxid: 9601)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 8

EC: 9

>sp|Q8K354|CBR3_MOUSE Carbonyl reductase [NADPH] 3 OS=Mus musculus GN=Cbr3 PE=2 SV=1

 Score =  158 bits (399), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 92/260 (35%), Positives = 148/260 (56%), Gaps = 16/260 (6%)

Query: 32  IAIVTGANKGIGFALVKRLA-ELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSD 90
           +A+VTGANKGIGFA+ + L  +    V+LTARD  RG+ AV+ L  +GL   F QLD+ D
Sbjct: 7   VALVTGANKGIGFAITRDLCRKFSGDVVLTARDEARGRAAVQQLQAEGLSPRFHQLDIDD 66

Query: 91  PSSIEAFVSWFKSNFAALDILVNNAGVSF--NDIYKNTVEHAETVIRTNFYGAKLLTESL 148
           P SI A   + +  +  L++LVNNAG++F  +D     ++ AE  ++TNF+  + +   L
Sbjct: 67  PQSIRALRDFLRKEYGGLNVLVNNAGIAFRMDDPTPFDIQ-AEVTLKTNFFATRNVCTEL 125

Query: 149 LPLFRRSPSKSRILNISSRLG--TLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKD 206
           LP+ +      R++NISS  G   L   R  +++     + L+E  +   +  F++  K+
Sbjct: 126 LPIMK---PHGRVVNISSLQGLKALENCRE-DLQEKFRCDTLTEVDLVDLMKKFVEDTKN 181

Query: 207 GTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYE----GEGISVNSYCPGFTQTSMTQGQ 262
              + +GWP+  + Y VSKL +   T +LA++ +     + I +N+ CPG+ +T M + Q
Sbjct: 182 EVHEREGWPD--SAYGVSKLGVTVLTRILARQLDEKRKADRILLNACCPGWVKTDMARDQ 239

Query: 263 GSHTADEAADVGARLLLLHP 282
           GS T +E A+    L LL P
Sbjct: 240 GSRTVEEGAETPVYLALLPP 259

Has low NADPH-dependent oxidoreductase activity towards 4-benzoylpyridine and menadione (in vitro).

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 8

EC: 4

>sp|Q6WAU1|IPIPR_MENPI (-)-isopiperitenone reductase OS=Mentha piperita PE=1 SV=1

 Score =  156 bits (394), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 114/302 (37%), Positives = 167/302 (55%), Gaps = 47/302 (15%)

Query: 33  AIVTGANKGIGFALVKRLAELGLTVILTARDVERG----QRAVESLSEKGLPVNFFQLDV 88
           A+VTGANKGIGF + ++LAE G+ VILT+R+ +RG    Q+ ++ L+     + F QLDV
Sbjct: 8   ALVTGANKGIGFEICRQLAEKGIIVILTSRNEKRGLEARQKLLKELNVSENRLVFHQLDV 67

Query: 89  SDPSSIEAFVSWFKSNFAALDILVNNAGVS----------FNDIYK-------------- 124
           +D +S+ A   + KS F  LDILVNNAGVS          FN+  +              
Sbjct: 68  TDLASVAAVAVFIKSKFGKLDILVNNAGVSGVEMVGDVSVFNEYIEADFKALQALEAGAK 127

Query: 125 --------------NTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGT 170
                            E A+  + TN+YG K LT++L+PL + SPS  RI+N+SS  G+
Sbjct: 128 EEPPFKPKANGEMIEKFEGAKDCVVTNYYGPKRLTQALIPLLQLSPS-PRIVNVSSSFGS 186

Query: 171 LSKVRNPNIKSILEDEE-LSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALN 229
           L  + N   K +L DE+ L+EE+++  V +FL+ +K+G  +   WP  +    VSK ALN
Sbjct: 187 LLLLWNEWAKGVLGDEDRLTEERVDEVVEVFLKDIKEGKLEESQWPPHFAAERVSKAALN 246

Query: 230 AYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTADEAADVGARLLLLHPQQLPTAK 289
           AYT + AK+Y      +N+ CPG+ +T +T   G  +  EAA V  +L LL P   P+  
Sbjct: 247 AYTKIAAKKY--PSFRINAICPGYAKTDITFHAGPLSVAEAAQVPVKLALL-PDGGPSGC 303

Query: 290 FY 291
           F+
Sbjct: 304 FF 305

Monoterpene synthase that catalyzes the specific reduction of the 1(2)-double bond of (-)-isopiperitenone to produce (+)-cis-isopulegone. Does not catalyze the reverse reaction. Unable to reduce (+)-pulegone, (+)-cis-isopulegone, (-)-menthone or the 1,2-double bond of (-)-carvone. Able to utilize NADH with 20% the efficiency of NADPH.

Mentha piperita (taxid: 34256)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 8

EC: 2

>sp|Q8MI29|CBR1_MACFA Carbonyl reductase [NADPH] 1 OS=Macaca fascicularis GN=CBR1 PE=2 SV=1

 Score =  154 bits (388), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 89/257 (34%), Positives = 144/257 (56%), Gaps = 14/257 (5%)

Query: 32  IAIVTGANKGIGFALVKRLAEL-GLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSD 90
           +A+VTG+NKGIG A+V+ L  L    V+LTARDV RGQ AV+ L  +GL   F QLD+ D
Sbjct: 7   VALVTGSNKGIGLAIVRDLCRLFSGEVVLTARDVARGQAAVQQLQAEGLSPRFHQLDIDD 66

Query: 91  PSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEH--AETVIRTNFYGAKLLTESL 148
             SI     +    +  LD+LVNNAG++F  +   T  H  AE  ++TNF+G + +   L
Sbjct: 67  LQSIRTLRDFLLKEYGGLDVLVNNAGIAFK-VADPTPFHIQAEVTMKTNFFGTRDVCTEL 125

Query: 149 LPLFRRSPSKSRILNISSRLGTLS-KVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDG 207
           LPL +    + R++NISS +   + K  +P ++     E ++EE++   +  F +  K G
Sbjct: 126 LPLIK---PQGRVVNISSMMSLRALKSCSPELQQKFRSETITEEELVGLMNKFAEDTKKG 182

Query: 208 TWKSQGWPEIWTDYAVSKLALNAYTMVLAKRY----EGEGISVNSYCPGFTQTSMTQGQG 263
             + +GWP   + Y V+K+ +   + + A++     +G+ I +N+ CPG+ +T M     
Sbjct: 183 VHQKEGWPS--SAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPSA 240

Query: 264 SHTADEAADVGARLLLL 280
           + + +E A+    L LL
Sbjct: 241 TKSPEEGAETPVYLALL 257

NADPH-dependent reductase with broad substrate specificity. Catalyzes the reduction of a wide variety of carbonyl compounds including quinones, prostaglandins, menadione, plus various xenobiotics. Catalyzes the reduction of the antitumor anthracyclines doxorubicin and daunorubicin to the cardiotoxic compounds doxorubicinol and daunorubicinol. Can convert prostaglandin E2 to prostaglandin F2-alpha. Can bind glutathione, which explains its higher affinity for glutathione-conjugated substrates. Catalyzes the reduction of S-nitrosoglutathione.

Macaca fascicularis (taxid: 9541)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 8

EC: 9

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	302
359478203	298	PREDICTED: (+)-neomenthol dehydrogenase-	0.943	0.956	0.692	1e-113
224121776	280	predicted protein [Populus trichocarpa]	0.920	0.992	0.687	1e-112
255567780	296	carbonyl reductase, putative [Ricinus co	0.947	0.966	0.690	1e-110
296084308	302	unnamed protein product [Vitis vinifera]	0.917	0.917	0.670	1e-109
40850583	308	putative short-chain hydrogenase/reducta	0.930	0.912	0.618	1e-100
15231739	302	Rossmann-fold NAD(P)-binding domain-cont	0.897	0.897	0.654	1e-100
297820806	301	short-chain dehydrogenase/reductase fami	0.900	0.903	0.648	2e-99
357164459	298	PREDICTED: (+)-neomenthol dehydrogenase-	0.917	0.929	0.628	6e-97
223942335	292	unknown [Zea mays] gi|238013434|gb|ACR37	0.927	0.958	0.619	7e-96
449435095	298	PREDICTED: (+)-neomenthol dehydrogenase-	0.910	0.922	0.664	1e-94

>gi|359478203|ref|XP_002274731.2| PREDICTED: (+)-neomenthol dehydrogenase-like [Vitis vinifera]

 Score =  412 bits (1060), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 198/286 (69%), Positives = 241/286 (84%), Gaps = 1/286 (0%)

Query: 18  SSLVSSTKWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEK 77
           S L  + +WWSK+T+AIVTGANKGIGFALVKRLAE GLTVILTARD  RG +A++SL+ +
Sbjct: 13  SPLHGACRWWSKDTVAIVTGANKGIGFALVKRLAESGLTVILTARDEARGLKALQSLAAQ 72

Query: 78  GLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTN 137
           GL V+F  LDVS+P SI+ F SWF+ +F  LDILVNNAGVSFN+I +N+VEHAE VI+TN
Sbjct: 73  GLHVHFSLLDVSNPDSIQTFASWFQHSFRKLDILVNNAGVSFNNINENSVEHAEVVIKTN 132

Query: 138 FYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEE-LSEEQIERF 196
           +YG K+L E+LLP+FRRS S SRILNISSRLG L+K++NPNIK IL DEE LS++QI+R 
Sbjct: 133 YYGPKMLIEALLPMFRRSSSVSRILNISSRLGLLNKLKNPNIKEILLDEEKLSKDQIDRI 192

Query: 197 VGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQT 256
           V +FL++VK GTWK+QGWPEIWTDYAVSKLALNAY+ VLAKRY+G G+SVN +CPGFTQT
Sbjct: 193 VSMFLENVKTGTWKNQGWPEIWTDYAVSKLALNAYSRVLAKRYKGCGLSVNCFCPGFTQT 252

Query: 257 SMTQGQGSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVKSNL 302
           +MT G+G+HTAD AA +GARL LL P++LPT KFY+G  P V S L
Sbjct: 253 TMTGGKGNHTADAAASIGARLALLPPEELPTGKFYLGFSPQVYSKL 298

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224121776|ref|XP_002330650.1| predicted protein [Populus trichocarpa] gi|222872254|gb|EEF09385.1| predicted protein [Populus trichocarpa]

 Score =  412 bits (1058), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 191/278 (68%), Positives = 237/278 (85%)

Query: 25  KWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFF 84
           +WWSK+T+A+VTGANKGIGF+LVK+LA+LGLTVILTARDVE+G  AVE L   GL V+F+
Sbjct: 3   RWWSKDTVAMVTGANKGIGFSLVKQLAQLGLTVILTARDVEKGNSAVELLKSHGLHVHFY 62

Query: 85  QLDVSDPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLL 144
           +LDVSDP+S++   SWF+  F  LDIL+NNA VSFNDIY+N+V+HAE VI+TNFYG KLL
Sbjct: 63  RLDVSDPASVKTLASWFQKKFGVLDILINNAAVSFNDIYENSVDHAEIVIKTNFYGVKLL 122

Query: 145 TESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSV 204
           TE+LLP+FR S S SRILNISSRLG+++K+RNP +K +L +E LS ++IE  V LFL++V
Sbjct: 123 TEALLPMFRLSDSISRILNISSRLGSINKMRNPKMKEMLLNERLSAQEIEGMVNLFLENV 182

Query: 205 KDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGS 264
           +DGTWK+QGWPEIWTDYAVSKLALNAY+ VLAK+YE  G+SVN +CPGFTQTSMT G+G+
Sbjct: 183 RDGTWKNQGWPEIWTDYAVSKLALNAYSRVLAKQYEDFGLSVNCFCPGFTQTSMTSGKGT 242

Query: 265 HTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVKSNL 302
           HTAD+AA+VGARL LL P +LPT +FYIG +P V S L
Sbjct: 243 HTADDAAEVGARLALLPPGELPTGRFYIGFNPGVISKL 280

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255567780|ref|XP_002524868.1| carbonyl reductase, putative [Ricinus communis] gi|223535831|gb|EEF37492.1| carbonyl reductase, putative [Ricinus communis]

 Score =  405 bits (1041), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 199/288 (69%), Positives = 239/288 (82%), Gaps = 2/288 (0%)

Query: 17  SSSLVSSTKWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSE 76
           SS + S+T+WWSK+T+AIVTGANKGIGF LVK+LAE G+TVILTARDVERG +AVE L +
Sbjct: 9   SSPISSATRWWSKDTVAIVTGANKGIGFWLVKQLAEEGVTVILTARDVERGCKAVEQLRD 68

Query: 77  K-GLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIR 135
             GL V+F+QLDVS+PSSI+AF S F+  F  LDILVNNA VSFNDI++NTVEHAETVI+
Sbjct: 69  HHGLNVHFYQLDVSNPSSIKAFSSQFEKEFGVLDILVNNAAVSFNDIHENTVEHAETVIK 128

Query: 136 TNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIER 195
           TNFYG KLL +SL P+FRRS S SRILNISSRLG+++K++NP +K +L  E LSEEQI+ 
Sbjct: 129 TNFYGPKLLIQSLFPMFRRSKSISRILNISSRLGSINKMKNPKMKEMLLSESLSEEQIDG 188

Query: 196 FVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGE-GISVNSYCPGFT 254
            V  FL+SV +GTWKSQGWPEIWTDYAVSKLALN+Y+ VLA+R   E G+SVN +CPGFT
Sbjct: 189 MVTSFLESVNNGTWKSQGWPEIWTDYAVSKLALNSYSRVLARRCNKEYGLSVNCFCPGFT 248

Query: 255 QTSMTQGQGSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVKSNL 302
           QTSMT+G+G+HTA +AA+VGARL LL PQ LPT  FYIG  P + S L
Sbjct: 249 QTSMTKGKGTHTAHDAAEVGARLALLPPQHLPTGTFYIGFSPGIVSKL 296

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296084308|emb|CBI24696.3| unnamed protein product [Vitis vinifera]

 Score =  402 bits (1033), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 193/288 (67%), Positives = 237/288 (82%), Gaps = 11/288 (3%)

Query: 26  WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQ 85
           WWSK+T+AIVTGANKGIGFALVKRLAE GLTVILTARD  RG +A++SL+ +GL V+F  
Sbjct: 15  WWSKDTVAIVTGANKGIGFALVKRLAESGLTVILTARDEARGLKALQSLAAQGLHVHFSL 74

Query: 86  LDVSDPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLT 145
           LDVS+P SI+ F SWF+ +F  LDILVNNAGVSFN+I +N+VEHAE VI+TN+YG K+L 
Sbjct: 75  LDVSNPDSIQTFASWFQHSFRKLDILVNNAGVSFNNINENSVEHAEVVIKTNYYGPKMLI 134

Query: 146 ESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSI-----------LEDEELSEEQIE 194
           E+LLP+FRRS S SRILNISSRLG L+K++NPN  SI           L++E+LS++QI+
Sbjct: 135 EALLPMFRRSSSVSRILNISSRLGLLNKLKNPNTNSIKLKNPNIKEILLDEEKLSKDQID 194

Query: 195 RFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFT 254
           R V +FL++VK GTWK+QGWPEIWTDYAVSKLALNAY+ VLAKRY+G G+SVN +CPGFT
Sbjct: 195 RIVSMFLENVKTGTWKNQGWPEIWTDYAVSKLALNAYSRVLAKRYKGCGLSVNCFCPGFT 254

Query: 255 QTSMTQGQGSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVKSNL 302
           QT+MT G+G+HTAD AA +GARL LL P++LPT KFY+G  P V S L
Sbjct: 255 QTTMTGGKGNHTADAAASIGARLALLPPEELPTGKFYLGFSPQVYSKL 302

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|40850583|gb|AAR96014.1| putative short-chain hydrogenase/reductase [Musa acuminata]

 Score =  370 bits (951), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 183/296 (61%), Positives = 226/296 (76%), Gaps = 15/296 (5%)

Query: 22  SSTKWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPV 81
           S+T+WWSKET+A+VTGANKGIGFALVKRLAELGLTV+LT+RDV +G+ AVESL  +G+ V
Sbjct: 13  STTRWWSKETVAVVTGANKGIGFALVKRLAELGLTVVLTSRDVGKGKAAVESLDGQGIHV 72

Query: 82  NFFQLDVSDPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGA 141
            F  LDV++PSSI  F +W +  F  LDIL+NNA VSFN+I  N+VEHAETVIRTNFYG 
Sbjct: 73  AFCHLDVAEPSSIVTFAAWLERRFGGLDILINNAAVSFNEIDTNSVEHAETVIRTNFYGP 132

Query: 142 KLLTESLLPLFRRS-PSKSRILNISSRLG-------------TLSKVRNPNIKSILEDEE 187
           K+L ESLLPLFRRS  + SRILNISS+LG              L KVRNP +K +L+DEE
Sbjct: 133 KMLIESLLPLFRRSIATSSRILNISSQLGLLNAVNQSHVSLCALQKVRNPALKELLQDEE 192

Query: 188 -LSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISV 246
            L+   +ER V  FL  VK GTW+ +GWP +WTDY+VSKLALNAY+ +LAK+ EG G+SV
Sbjct: 193 ILTVAAVERMVSQFLHHVKMGTWREEGWPTVWTDYSVSKLALNAYSRLLAKQQEGRGLSV 252

Query: 247 NSYCPGFTQTSMTQGQGSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVKSNL 302
           N +CPGFT+TSMT+G+GS + +EAA+VGA+L LL P QLPT KF+    P + S L
Sbjct: 253 NCFCPGFTRTSMTRGRGSRSPEEAAEVGAKLALLPPHQLPTGKFFKWCTPSLYSKL 308

Source: Musa acuminata

Species: Musa acuminata

Genus: Musa

Family: Musaceae

Order: Zingiberales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15231739|ref|NP_191530.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] gi|6996307|emb|CAB75468.1| putative protein [Arabidopsis thaliana] gi|332646437|gb|AEE79958.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana]

 Score =  369 bits (947), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 178/272 (65%), Positives = 220/272 (80%), Gaps = 1/272 (0%)

Query: 25  KWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLP-VNF 83
           +WWS+ET A+VTGANKGIGFA+VKRL ELGLTV+LTAR+ E G +A ESL   G   V+F
Sbjct: 23  EWWSEETTAVVTGANKGIGFAVVKRLLELGLTVVLTARNAENGSQAAESLRRIGFGNVHF 82

Query: 84  FQLDVSDPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKL 143
             LD+SDPSSI AF SWF  N   LDILVNNA VSFN + +N ++  ET+I+TNFYGAKL
Sbjct: 83  CCLDISDPSSIAAFASWFGRNLGILDILVNNAAVSFNAVGENLIKEPETIIKTNFYGAKL 142

Query: 144 LTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQS 203
           LTE+LLPLFRRS S SRILN+SSRLGTL+K+R+P+I+ ILE E+L+ EQI+  +  FLQ 
Sbjct: 143 LTEALLPLFRRSVSVSRILNMSSRLGTLNKLRSPSIRRILESEDLTNEQIDATLTQFLQD 202

Query: 204 VKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQG 263
           VK GTW+ QGWPE W DYA+SKLALNAY+ VLA+RY+G+ +SVN  CPGFT+TSMT GQG
Sbjct: 203 VKSGTWEKQGWPENWPDYAISKLALNAYSRVLARRYDGKKLSVNCLCPGFTRTSMTGGQG 262

Query: 264 SHTADEAADVGARLLLLHPQQLPTAKFYIGLD 295
           +HTADEAA + A+L+LL P++L T KFYI ++
Sbjct: 263 THTADEAAAIVAKLVLLPPEKLATGKFYICVE 294

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297820806|ref|XP_002878286.1| short-chain dehydrogenase/reductase family protein [Arabidopsis lyrata subsp. lyrata] gi|297324124|gb|EFH54545.1| short-chain dehydrogenase/reductase family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  368 bits (944), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 177/273 (64%), Positives = 220/273 (80%), Gaps = 1/273 (0%)

Query: 25  KWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLP-VNF 83
           +WWS+ET A+VTGANKGIGFA+VKRL ELGLTV+LTAR+ E G +A +SL   G   V+F
Sbjct: 22  EWWSEETTAVVTGANKGIGFAVVKRLLELGLTVVLTARNAENGIQAADSLRLTGFRNVHF 81

Query: 84  FQLDVSDPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKL 143
             LD+SDPSSI AF SWF+ NF  LDILVNNA VSFN + +N +   ET+I+TNFYG KL
Sbjct: 82  GCLDISDPSSIAAFASWFRHNFGVLDILVNNAAVSFNAVGENLINEPETIIKTNFYGPKL 141

Query: 144 LTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQS 203
           LTE+LLPLFRRS S SRILN+SSRLGTL+K+R+P+I+ ILE E+L+ EQI+  V  FLQ 
Sbjct: 142 LTEALLPLFRRSVSVSRILNMSSRLGTLNKLRSPSIRRILESEDLTNEQIDATVTQFLQD 201

Query: 204 VKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQG 263
           VK GTW+ QGWPE W DYA+SK+ALNAY+ VLA+RY+G+ +SVN  CPGFT+TSMT GQG
Sbjct: 202 VKSGTWEKQGWPENWPDYAISKMALNAYSRVLARRYDGKKLSVNCLCPGFTRTSMTGGQG 261

Query: 264 SHTADEAADVGARLLLLHPQQLPTAKFYIGLDP 296
           +HTADEAA   A+L+L+ P++L + KFYI L+P
Sbjct: 262 THTADEAAATVAKLVLIPPEKLTSGKFYICLEP 294

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357164459|ref|XP_003580060.1| PREDICTED: (+)-neomenthol dehydrogenase-like [Brachypodium distachyon]

 Score =  360 bits (923), Expect = 6e-97,   Method: Compositional matrix adjust.
 Identities = 176/280 (62%), Positives = 213/280 (76%), Gaps = 3/280 (1%)

Query: 26  WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQ 85
           WWSKET+A+VTGAN+GIG AL  RLAE GLTV+LTARD  RG+ A   L ++GLPV F +
Sbjct: 19  WWSKETVAVVTGANRGIGLALAARLAEQGLTVVLTARDGVRGEAAAAPLRDRGLPVVFRR 78

Query: 86  LDVSDPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLT 145
           LDVSD +S+  F  W ++    LDILVNNA VSFN+I  N+VEHAETV+RTNFYGAKLLT
Sbjct: 79  LDVSDAASVAGFAGWLRNAVGGLDILVNNAAVSFNEIDTNSVEHAETVLRTNFYGAKLLT 138

Query: 146 ESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEE-LSEEQIERFVGLFLQSV 204
           E+LLPLFRRSP+ SRILNISS+LG L+KV NP++  +L+DEE L+E +IE  V  FL  V
Sbjct: 139 EALLPLFRRSPATSRILNISSQLGLLNKVSNPSLMRLLQDEETLTEAKIEGMVSQFLAQV 198

Query: 205 KDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRY--EGEGISVNSYCPGFTQTSMTQGQ 262
           KDGTW   GWP++WTDY+VSKLALNAYT VLA+R    GE +S N +CPGFT+T MT+G 
Sbjct: 199 KDGTWAEHGWPKVWTDYSVSKLALNAYTRVLARRLRERGERVSANCFCPGFTRTDMTKGW 258

Query: 263 GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVKSNL 302
           G  TA+E ADVGARL LL P +LPT  F+    P + S L
Sbjct: 259 GKRTAEEVADVGARLALLPPGELPTGTFFKWCTPQLYSKL 298

Source: Brachypodium distachyon

Species: Brachypodium distachyon

Genus: Brachypodium

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|223942335|gb|ACN25251.1| unknown [Zea mays] gi|238013434|gb|ACR37752.1| unknown [Zea mays] gi|413918783|gb|AFW58715.1| hypothetical protein ZEAMMB73_802882 [Zea mays]

 Score =  356 bits (914), Expect = 7e-96,   Method: Compositional matrix adjust.
 Identities = 174/281 (61%), Positives = 214/281 (76%), Gaps = 1/281 (0%)

Query: 23  STKWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVN 82
           S  WWS+ET+A+VTGAN+GIG AL  RLAE GLTV+LTARD ERG+ A   L  +GL V 
Sbjct: 12  SGAWWSRETVAVVTGANRGIGHALAARLAEHGLTVVLTARDGERGEAAAAPLLARGLAVV 71

Query: 83  FFQLDVSDPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAK 142
           F +LDVSD +S+  F +W +     LDILVNNA VSFN+I  N+VEHAETV+RTNFYGAK
Sbjct: 72  FRRLDVSDAASVAEFAAWLRDAVGGLDILVNNAAVSFNEIDTNSVEHAETVLRTNFYGAK 131

Query: 143 LLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEE-LSEEQIERFVGLFL 201
           +LTE+LLPLFR+S + SRILNISS+LG L+KV +P++K++L DEE L+E  IE  V  FL
Sbjct: 132 MLTEALLPLFRQSSATSRILNISSQLGLLNKVGDPSLKALLLDEERLTEAGIEAMVSRFL 191

Query: 202 QSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG 261
             VKDGTW  QGWP++WTDY+VSKLALNAY+ +LA+R E  G+SVN +CPGFT+T MT+G
Sbjct: 192 AQVKDGTWGEQGWPKVWTDYSVSKLALNAYSRLLARRLEARGVSVNCFCPGFTRTDMTRG 251

Query: 262 QGSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVKSNL 302
            G  TA EAADVGARL LL P +LPT  F+    P + S L
Sbjct: 252 WGKRTAGEAADVGARLALLPPTELPTGTFFKWRTPQLYSKL 292

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449435095|ref|XP_004135331.1| PREDICTED: (+)-neomenthol dehydrogenase-like [Cucumis sativus]

 Score =  352 bits (903), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 184/277 (66%), Positives = 221/277 (79%), Gaps = 2/277 (0%)

Query: 18  SSLVSSTKWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEK 77
           SS + S +WWSK T+AIVTGANKGIGFALV++LA+  LTV+LTARD  RG +AVE+L  +
Sbjct: 9   SSSLPSHRWWSKNTVAIVTGANKGIGFALVRKLAQSELTVVLTARDEVRGLKAVETLRNE 68

Query: 78  GL-PVNFFQLDVSDPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRT 136
           GL  V F +LDVSDP SI AF +WF SNF ALDILVNNA VSFNDIY+N+VE+AETV++T
Sbjct: 69  GLGHVLFRRLDVSDPDSIVAFAAWFGSNFQALDILVNNAAVSFNDIYENSVENAETVMKT 128

Query: 137 NFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERF 196
           NFYG KLL E+L+P FR S SK+RILNI+SRLGT+ KVRN  +K ILE +++SEE IE  
Sbjct: 129 NFYGPKLLIEALIPYFRSSSSKTRILNITSRLGTVDKVRNVKVKEILESKDVSEEDIEGV 188

Query: 197 VGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEG-ISVNSYCPGFTQ 255
           V  FL+ VK GTWK  GWP +WT+YA+SKLALN YT VLAKRY   G +SVNS+CPGFTQ
Sbjct: 189 VNAFLEDVKTGTWKKGGWPALWTEYAMSKLALNTYTRVLAKRYGVYGSVSVNSFCPGFTQ 248

Query: 256 TSMTQGQGSHTADEAADVGARLLLLHPQQLPTAKFYI 292
           TSMT G+G+HTAD AA VG+RL LL P  LPT +F+ 
Sbjct: 249 TSMTGGKGTHTADAAALVGSRLALLPPHLLPTGQFFF 285

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	302
TAIR|locus:2097508	302	AT3G59710 [Arabidopsis thalian	0.887	0.887	0.631	9.9e-87
TAIR|locus:2159188	316	AT5G61830 [Arabidopsis thalian	0.884	0.844	0.482	1.8e-62
TAIR|locus:2157408	314	AT5G51030 [Arabidopsis thalian	0.880	0.847	0.452	1.7e-59
UNIPROTKB|Q6WAU1	314	Q6WAU1 "(-)-isopiperitenone re	0.635	0.611	0.328	1.4e-40
MGI|MGI:88284	277	Cbr1 "carbonyl reductase 1" [M	0.844	0.920	0.343	9.2e-36
MGI|MGI:1309992	277	Cbr3 "carbonyl reductase 3" [M	0.807	0.880	0.35	3.1e-35
UNIPROTKB|P16152	277	CBR1 "Carbonyl reductase [NADP	0.837	0.913	0.335	8.3e-35
UNIPROTKB|Q5RCU5	277	CBR1 "Carbonyl reductase [NADP	0.837	0.913	0.335	8.3e-35
RGD|1309728	277	Cbr3 "carbonyl reductase 3" [R	0.807	0.880	0.346	1.3e-34
UNIPROTKB|F1SGX4	277	CBR3 "Uncharacterized protein"	0.811	0.884	0.347	2.2e-34

TAIR|locus:2097508 AT3G59710 [Arabidopsis thaliana (taxid:3702)]

 Score = 867 (310.3 bits), Expect = 9.9e-87, P = 9.9e-87
 Identities = 170/269 (63%), Positives = 207/269 (76%)

Query:    25 KWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLP-VNF 83
             +WWS+ET A+VTGANKGIGFA+VKRL ELGLTV+LTAR+ E G +A ESL   G   V+F
Sbjct:    23 EWWSEETTAVVTGANKGIGFAVVKRLLELGLTVVLTARNAENGSQAAESLRRIGFGNVHF 82

Query:    84 FQLDVSDPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKL 143
               LD+SDPSSI AF SWF  N   LDILVNNA VSFN + +N ++  ET+I+TNFYGAKL
Sbjct:    83 CCLDISDPSSIAAFASWFGRNLGILDILVNNAAVSFNAVGENLIKEPETIIKTNFYGAKL 142

Query:   144 LTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFLQS 203
             LTE+LLPLFRRS S SRILN+SSRLGTL+K+R+P+I+                +  FLQ 
Sbjct:   143 LTEALLPLFRRSVSVSRILNMSSRLGTLNKLRSPSIRRILESEDLTNEQIDATLTQFLQD 202

Query:   204 VKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQG 263
             VK GTW+ QGWPE W DYA+SKLALNAY+ VLA+RY+G+ +SVN  CPGFT+TSMT GQG
Sbjct:   203 VKSGTWEKQGWPENWPDYAISKLALNAYSRVLARRYDGKKLSVNCLCPGFTRTSMTGGQG 262

Query:   264 SHTADEAADVGARLLLLHPQQLPTAKFYI 292
             +HTADEAA + A+L+LL P++L T KFYI
Sbjct:   263 THTADEAAAIVAKLVLLPPEKLATGKFYI 291

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0000038 "very long-chain fatty acid metabolic process" evidence=RCA

GO:0009409 "response to cold" evidence=RCA

GO:0042335 "cuticle development" evidence=RCA

TAIR|locus:2159188 AT5G61830 [Arabidopsis thaliana (taxid:3702)]

 Score = 638 (229.6 bits), Expect = 1.8e-62, P = 1.8e-62
 Identities = 134/278 (48%), Positives = 183/278 (65%)

Query:    25 KWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESL--SEKGLPVN 82
             +WWS E +A+VTG+N+GIGF + ++LA  GLTV+LTAR+V  G  AV+SL   E+GL V 
Sbjct:    31 RWWSCENVAVVTGSNRGIGFEIARQLAVHGLTVVLTARNVNAGLEAVKSLRHQEEGLKVY 90

Query:    83 FFQLDVSDPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAK 142
             F QLDV+D SSI  F  W K  F  LDILVNNAGV++N    NTVE AETVI TN+ G K
Sbjct:    91 FHQLDVTDSSSIREFGCWLKQTFGGLDILVNNAGVNYNLGSDNTVEFAETVISTNYQGTK 150

Query:   143 LLTESLLPLFRRSPSKSRILNISSRLGTLSKVRN--PNIKXXXXXXX---XXXXXXXRFV 197
              +T++++PL R SP  +R++N+SSRLG ++  RN   N++                 R V
Sbjct:   151 NMTKAMIPLMRPSPHGARVVNVSSRLGRVNGRRNRLANVELRDQLSSPDLLTEELIDRTV 210

Query:   198 GLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEG----ISVNSYCPGF 253
               F+  VKDGTW+S GWP+ +TDY++SKLA+NAYT ++AK  E  G    I VNS+CPG+
Sbjct:   211 SKFINQVKDGTWESGGWPQTFTDYSMSKLAVNAYTRLMAKELERRGEEEKIYVNSFCPGW 270

Query:   254 TQTSMTQGQGSHTADEAADVGARLLLLHPQQLPTAKFY 291
              +T+MT   G+   ++AAD G  L L+  ++  T KF+
Sbjct:   271 VKTAMTGYAGNMPPEDAADTGVWLSLVLSEEAVTGKFF 308

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2157408 AT5G51030 [Arabidopsis thaliana (taxid:3702)]

 Score = 610 (219.8 bits), Expect = 1.7e-59, P = 1.7e-59
 Identities = 125/276 (45%), Positives = 179/276 (64%)

Query:    25 KWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFF 84
             +WW+ ET+A+VTGAN+GIGF +V++LA  GLTVILT+RD   G  A + L E G  V+F 
Sbjct:    32 RWWTSETVAVVTGANRGIGFEMVRQLAGHGLTVILTSRDENVGVEAAKILQEGGFNVDFH 91

Query:    85 QLDVSDPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLL 144
             +LD+ D SSI+ F  W K  +  +D+L+NNAGV++N    N+VE +  VI TN+YG K +
Sbjct:    92 RLDILDSSSIQEFCEWIKEKYGFIDVLINNAGVNYNVGSDNSVEFSHMVISTNYYGTKNI 151

Query:   145 TESLLPLFRRSPSKSRILNISSRLGTL----SKVRNPNIKXXXXXXXXXXXXXX-RFVGL 199
               +++PL R +   +RI+N++SRLG L    SK+ N +++               + V  
Sbjct:   152 INAMIPLMRHACQGARIVNVTSRLGRLKGRHSKLENEDVRAKLMDVDSLTEEIVDKTVSE 211

Query:   200 FLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAK----RYEGEGISVNSYCPGFTQ 255
             FL+ V++GTW+S GWP  +TDY+VSK+A+NAYT VLAK    R EGE I  N +CPG+ +
Sbjct:   212 FLKQVEEGTWESGGWPHSFTDYSVSKMAVNAYTRVLAKELSERPEGEKIYANCFCPGWVK 271

Query:   256 TSMTQGQGSHTADEAADVGARLLLLHPQQLPTAKFY 291
             T+MT   G+ +A++ AD G  L LL P Q  T KF+
Sbjct:   272 TAMTGYAGNVSAEDGADTGVWLALL-PDQAITGKFF 306

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

UNIPROTKB|Q6WAU1 Q6WAU1 "(-)-isopiperitenone reductase" [Mentha x piperita (taxid:34256)]

 Score = 242 (90.2 bits), Expect = 1.4e-40, Sum P(2) = 1.4e-40
 Identities = 68/207 (32%), Positives = 102/207 (49%)

Query:    94 IEAFVSWFKSNFAALDILVNNAGVSFNDIYK--------NTVEHAETVIRTNFYGAKLLT 145
             +  F  + +++F AL  L   AG      +K           E A+  + TN+YG K LT
Sbjct:   105 VSVFNEYIEADFKALQAL--EAGAKEEPPFKPKANGEMIEKFEGAKDCVVTNYYGPKRLT 162

Query:   146 ESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXX-RFVGLFLQSV 204
             ++L+PL + SPS  RI+N+SS  G+L  + N   K                 V +FL+ +
Sbjct:   163 QALIPLLQLSPSP-RIVNVSSSFGSLLLLWNEWAKGVLGDEDRLTEERVDEVVEVFLKDI 221

Query:   205 KDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGS 264
             K+G  +   WP  +    VSK ALNAYT + AK+Y      +N+ CPG+ +T +T   G 
Sbjct:   222 KEGKLEESQWPPHFAAERVSKAALNAYTKIAAKKYPS--FRINAICPGYAKTDITFHAGP 279

Query:   265 HTADEAADVGARLLLLHPQQLPTAKFY 291
              +  EAA V  +L LL P   P+  F+
Sbjct:   280 LSVAEAAQVPVKLALL-PDGGPSGCFF 305

GO:0031525 "menthol biosynthetic process" evidence=IDA

GO:0042214 "terpene metabolic process" evidence=IDA

GO:0052581 "(-)-isopiperitenone reductase activity" evidence=IDA

GO:0070402 "NADPH binding" evidence=IDA

MGI|MGI:88284 Cbr1 "carbonyl reductase 1" [Mus musculus (taxid:10090)]

 Score = 386 (140.9 bits), Expect = 9.2e-36, P = 9.2e-36
 Identities = 94/274 (34%), Positives = 151/274 (55%)

Query:    28 SKETIAIVTGANKGIGFALVKRLA-ELGLTVILTARDVERGQRAVESLSEKGLPVNFFQL 86
             S   +A+VTGANKGIGFA+ + L  +    V+L ARD ERGQ AV+ L  +GL   F QL
Sbjct:     3 SSRPVALVTGANKGIGFAITRDLCRKFSGDVVLAARDEERGQTAVQKLQAEGLSPRFHQL 62

Query:    87 DVSDPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEH--AETVIRTNFYGAKLL 144
             D+ +P SI A   +    +  LD+LVNNAG++F  +  +T  H  AE  ++TNF+G + +
Sbjct:    63 DIDNPQSIRALRDFLLKEYGGLDVLVNNAGIAFK-VNDDTPFHIQAEVTMKTNFFGTRDV 121

Query:   145 TESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGL---FL 201
              + LLPL +  P + R++N+SS + +L  ++N  ++                VGL   F+
Sbjct:   122 CKELLPLIK--P-QGRVVNVSSMV-SLRALKNCRLELQQKFRSETITEE-ELVGLMNKFV 176

Query:   202 QSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYE----GEGISVNSYCPGFTQTS 257
             +  K G    +GWP   + Y V+K+ +   + +LA++      G+ I +N+ CPG+ +T 
Sbjct:   177 EDTKKGVHAEEGWPN--SAYGVTKIGVTVLSRILARKLNEQRRGDKILLNACCPGWVRTD 234

Query:   258 MTQGQGSHTADEAADVGARLLLLHPQ-QLPTAKF 290
             M   + + + +E A+    L LL P  + P  +F
Sbjct:   235 MAGPKATKSPEEGAETPVYLALLPPDAEGPHGQF 268

GO:0000166 "nucleotide binding" evidence=IEA

GO:0004090 "carbonyl reductase (NADPH) activity" evidence=ISO;TAS

GO:0005634 "nucleus" evidence=ISO

GO:0005737 "cytoplasm" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISO

GO:0005902 "microvillus" evidence=ISO

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016655 "oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor" evidence=ISO

GO:0017144 "drug metabolic process" evidence=ISO

GO:0042373 "vitamin K metabolic process" evidence=ISO

GO:0042376 "phylloquinone catabolic process" evidence=ISO

GO:0043231 "intracellular membrane-bounded organelle" evidence=ISO

GO:0047021 "15-hydroxyprostaglandin dehydrogenase (NADP+) activity" evidence=IEA

GO:0050221 "prostaglandin-E2 9-reductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=ISO;TAS

MGI|MGI:1309992 Cbr3 "carbonyl reductase 3" [Mus musculus (taxid:10090)]

 Score = 381 (139.2 bits), Expect = 3.1e-35, P = 3.1e-35
 Identities = 91/260 (35%), Positives = 145/260 (55%)

Query:    32 IAIVTGANKGIGFALVKRLA-ELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSD 90
             +A+VTGANKGIGFA+ + L  +    V+LTARD  RG+ AV+ L  +GL   F QLD+ D
Sbjct:     7 VALVTGANKGIGFAITRDLCRKFSGDVVLTARDEARGRAAVQQLQAEGLSPRFHQLDIDD 66

Query:    91 PSSIEAFVSWFKSNFAALDILVNNAGVSF--NDIYKNTVEHAETVIRTNFYGAKLLTESL 148
             P SI A   + +  +  L++LVNNAG++F  +D     ++ AE  ++TNF+  + +   L
Sbjct:    67 PQSIRALRDFLRKEYGGLNVLVNNAGIAFRMDDPTPFDIQ-AEVTLKTNFFATRNVCTEL 125

Query:   149 LPLFRRSPSKSRILNISSRLGTLSKVRN--PNIKXXXXXXXXXXXXXXRFVGLFLQSVKD 206
             LP+ +  P   R++NISS  G L  + N   +++                +  F++  K+
Sbjct:   126 LPIMK--PH-GRVVNISSLQG-LKALENCREDLQEKFRCDTLTEVDLVDLMKKFVEDTKN 181

Query:   207 GTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYE----GEGISVNSYCPGFTQTSMTQGQ 262
                + +GWP+  + Y VSKL +   T +LA++ +     + I +N+ CPG+ +T M + Q
Sbjct:   182 EVHEREGWPD--SAYGVSKLGVTVLTRILARQLDEKRKADRILLNACCPGWVKTDMARDQ 239

Query:   263 GSHTADEAADVGARLLLLHP 282
             GS T +E A+    L LL P
Sbjct:   240 GSRTVEEGAETPVYLALLPP 259

GO:0000166 "nucleotide binding" evidence=IEA

GO:0000253 "3-keto sterol reductase activity" evidence=ISO

GO:0004090 "carbonyl reductase (NADPH) activity" evidence=ISO

GO:0005737 "cytoplasm" evidence=IEA

GO:0005829 "cytosol" evidence=ISO

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0042376 "phylloquinone catabolic process" evidence=ISO

GO:0055114 "oxidation-reduction process" evidence=ISO

GO:0070402 "NADPH binding" evidence=ISO

UNIPROTKB|P16152 CBR1 "Carbonyl reductase [NADPH] 1" [Homo sapiens (taxid:9606)]

 Score = 377 (137.8 bits), Expect = 8.3e-35, P = 8.3e-35
 Identities = 90/268 (33%), Positives = 147/268 (54%)

Query:    32 IAIVTGANKGIGFALVKRLAEL-GLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSD 90
             +A+VTG NKGIG A+V+ L  L    V+LTARDV RGQ AV+ L  +GL   F QLD+ D
Sbjct:     7 VALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDD 66

Query:    91 PSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEH--AETVIRTNFYGAKLLTESL 148
               SI A   + +  +  LD+LVNNAG++F  +   T  H  AE  ++TNF+G + +   L
Sbjct:    67 LQSIRALRDFLRKEYGGLDVLVNNAGIAFK-VADPTPFHIQAEVTMKTNFFGTRDVCTEL 125

Query:   149 LPLFRRSPSKSRILNISSRLGTLS-KVRNPNIKXXXXXXXXXXXXXXRFVGLFLQSVKDG 207
             LPL +  P + R++N+SS +   + K  +P ++                +  F++  K G
Sbjct:   126 LPLIK--P-QGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKG 182

Query:   208 TWKSQGWPEIWTDYAVSKLALNAYTMV----LAKRYEGEGISVNSYCPGFTQTSMTQGQG 263
               + +GWP   + Y V+K+ +   + +    L+++ +G+ I +N+ CPG+ +T M   + 
Sbjct:   183 VHQKEGWPS--SAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPKA 240

Query:   264 SHTADEAADVGARLLLLHPQ-QLPTAKF 290
             + + +E A+    L LL P  + P  +F
Sbjct:   241 TKSPEEGAETPVYLALLPPDAEGPHGQF 268

GO:0000166 "nucleotide binding" evidence=IEA

GO:0047021 "15-hydroxyprostaglandin dehydrogenase (NADP+) activity" evidence=IEA

GO:0050221 "prostaglandin-E2 9-reductase activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0042373 "vitamin K metabolic process" evidence=IDA

GO:0017144 "drug metabolic process" evidence=IDA

GO:0004090 "carbonyl reductase (NADPH) activity" evidence=IDA

GO:0016655 "oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor" evidence=IDA

GO:0055114 "oxidation-reduction process" evidence=IDA

UNIPROTKB|Q5RCU5 CBR1 "Carbonyl reductase [NADPH] 1" [Pongo abelii (taxid:9601)]

 Score = 377 (137.8 bits), Expect = 8.3e-35, P = 8.3e-35
 Identities = 90/268 (33%), Positives = 147/268 (54%)

Query:    32 IAIVTGANKGIGFALVKRLAEL-GLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSD 90
             +A+VTG NKGIG A+V+ L  L    V+LTARDV RGQ AV+ L  +GL   F QLD+ D
Sbjct:     7 VALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVARGQAAVQQLQAEGLSPRFHQLDIDD 66

Query:    91 PSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEH--AETVIRTNFYGAKLLTESL 148
               SI A   + +  +  LD+LVNNAG++F  +   T  H  AE  ++TNF+G + +   L
Sbjct:    67 LQSIRALRDFLRKEYGGLDVLVNNAGIAFK-VADPTPFHIQAEVTMKTNFFGTRDVCTEL 125

Query:   149 LPLFRRSPSKSRILNISSRLGTLS-KVRNPNIKXXXXXXXXXXXXXXRFVGLFLQSVKDG 207
             LPL +  P + R++N+SS +   + K  +P ++                +  F++  K G
Sbjct:   126 LPLIK--P-QGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKG 182

Query:   208 TWKSQGWPEIWTDYAVSKLALNAYTMV----LAKRYEGEGISVNSYCPGFTQTSMTQGQG 263
               + +GWP   + Y V+K+ +   + +    L+++ +G+ I +N+ CPG+ +T M   + 
Sbjct:   183 VHQKEGWPS--SAYGVTKIGVTVLSRIHARKLSEQRKGDRILLNACCPGWVRTDMAGPKA 240

Query:   264 SHTADEAADVGARLLLLHPQ-QLPTAKF 290
             + + +E A+    L LL P  + P  +F
Sbjct:   241 TKSPEEGAETPVYLALLPPDAEGPHGQF 268

GO:0004090 "carbonyl reductase (NADPH) activity" evidence=ISS

GO:0017144 "drug metabolic process" evidence=ISS

GO:0042373 "vitamin K metabolic process" evidence=ISS

RGD|1309728 Cbr3 "carbonyl reductase 3" [Rattus norvegicus (taxid:10116)]

 Score = 375 (137.1 bits), Expect = 1.3e-34, P = 1.3e-34
 Identities = 90/260 (34%), Positives = 145/260 (55%)

Query:    32 IAIVTGANKGIGFALVKRLA-ELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSD 90
             +A+VTGANKGIGFA+ + L  +    V+LTARD  RG+ AV+ L  +GL   F QLD+ +
Sbjct:     7 VALVTGANKGIGFAITRDLCRKFSGDVVLTARDEARGRAAVKQLQAEGLSPRFHQLDIDN 66

Query:    91 PSSIEAFVSWFKSNFAALDILVNNAGVSF--NDIYKNTVEHAETVIRTNFYGAKLLTESL 148
             P SI A   + +  +  L++LVNNAG++F  +D     V+ AE  ++TNF+  + +   L
Sbjct:    67 PQSIRALRDFLRKEYGGLNVLVNNAGIAFRMDDPTPFDVQ-AEVTLKTNFFATRNVCTEL 125

Query:   149 LPLFRRSPSKSRILNISSRLGTLSKVRN--PNIKXXXXXXXXXXXXXXRFVGLFLQSVKD 206
             LP+ +  P   R++N+SS  G L  + N   +++                +  F++  K+
Sbjct:   126 LPIMK--PH-GRVVNVSSLQG-LKALENCSEDLQERFRCDTLTEGDLVDLMKKFVEDTKN 181

Query:   207 GTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYE----GEGISVNSYCPGFTQTSMTQGQ 262
                + +GWP+  + Y VSKL +   T +LA++ +     + I +N+ CPG+ +T M + Q
Sbjct:   182 EVHEREGWPD--SAYGVSKLGVTVLTRILARQLDEKRKADRILLNACCPGWVKTDMARDQ 239

Query:   263 GSHTADEAADVGARLLLLHP 282
             GS T +E A+    L LL P
Sbjct:   240 GSRTVEEGAETPVYLALLPP 259

GO:0000253 "3-keto sterol reductase activity" evidence=IDA

GO:0004090 "carbonyl reductase (NADPH) activity" evidence=ISO;IDA

GO:0005575 "cellular_component" evidence=ND

GO:0005634 "nucleus" evidence=IEA;ISO

GO:0005737 "cytoplasm" evidence=ISO

GO:0005829 "cytosol" evidence=IEA;ISO

GO:0042376 "phylloquinone catabolic process" evidence=IDA

GO:0070402 "NADPH binding" evidence=IEA;ISO

GO:0005730 "nucleolus" evidence=ISO

UNIPROTKB|F1SGX4 CBR3 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 373 (136.4 bits), Expect = 2.2e-34, P = 2.2e-34
 Identities = 90/259 (34%), Positives = 144/259 (55%)

Query:    32 IAIVTGANKGIGFALVKRLA-ELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSD 90
             +A+VTGANKGIGFA+ + L  +    V+LT+RD  RG+ AV+ L  +GL   F QLD+ D
Sbjct:     7 VALVTGANKGIGFAIARDLCRQFSGDVVLTSRDAARGRAAVQQLQAEGLSPRFHQLDIDD 66

Query:    91 PSSIEAFVSWFKSNFAALDILVNNAGVSF--NDIYKNTVEHAETVIRTNFYGAKLLTESL 148
               SI A   + +  +  L++LVNNAG++F  +D     ++ AE  ++TNF+G + +   L
Sbjct:    67 LQSIRALRDFLRKEYGGLNVLVNNAGIAFKIDDPTPFDIQ-AEMTLKTNFFGTRNVCIEL 125

Query:   149 LPLFRRSPSKSRILNISSRLGTLSKVR-NPNIKXXXXXXXXXXXXXXRFVGLFLQSVKDG 207
             LP+ +  P   R++NISS LG+ +    + +++                +  F++  K+ 
Sbjct:   126 LPIIK--PH-GRVVNISSLLGSKALENCSEDLQEKFRCEALTEEDLVDLMKKFVEDAKNE 182

Query:   208 TWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYE----GEGISVNSYCPGFTQTSMTQGQG 263
               + +GWP   + Y VSKL +   + +LA+R +     + I +N+ CPG+ +T MT GQG
Sbjct:   183 VHEREGWPS--SAYGVSKLGVTVLSRILAQRLDEKRKADRILLNACCPGWVKTDMTGGQG 240

Query:   264 SHTADEAADVGARLLLLHP 282
               T +E A     L LL P
Sbjct:   241 FETVEEGAVTPVYLALLPP 259

GO:0070402 "NADPH binding" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0004090 "carbonyl reductase (NADPH) activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P16152	CBR1_HUMAN	1, ., 1, ., 1, ., 1, 8, 9	0.3432	0.8377	0.9133	yes	no
P48758	CBR1_MOUSE	1, ., 1, ., 1, ., 1, 8, 9	0.3406	0.8476	0.9241	yes	no
Q5RCU5	CBR1_PONAB	1, ., 1, ., 1, ., 1, 8, 9	0.3432	0.8377	0.9133	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.1.1	0.766
4th Layer	1.1.1.189	LOW CONFIDENCE prediction!
3rd Layer	1.3.1.58	LOW CONFIDENCE prediction!
4th Layer	1.1.1.69	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: gw1.142.140.1 hypothetical protein (270 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	302
cd05324	225	cd05324, carb_red_PTCR-like_SDR_c, Porcine testicu	1e-80
cd05233	234	cd05233, SDR_c, classical (c) SDRs	3e-45
cd05327	269	cd05327, retinol-DH_like_SDR_c_like, retinol dehyd	6e-44
COG1028	251	COG1028, FabG, Dehydrogenases with different speci	4e-40
PRK05653	246	PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-34
PRK05557	248	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-33
cd05325	233	cd05325, carb_red_sniffer_like_SDR_c, carbonyl red	3e-33
cd05370	228	cd05370, SDR_c2, classical (c) SDR, subgroup 2	7e-33
cd05333	240	cd05333, BKR_SDR_c, beta-Keto acyl carrier protein	4e-31
PRK12939	250	PRK12939, PRK12939, short chain dehydrogenase; Pro	6e-31
PRK05565	247	PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-30
PRK12826	251	PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-prote	5e-30
cd05332	257	cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxyste	6e-30
TIGR01830	239	TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier	1e-29
PRK09242	257	PRK09242, PRK09242, tropinone reductase; Provision	1e-28
cd05374	248	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster	9e-28
cd05347	248	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogena	1e-26
COG0300	265	COG0300, DltE, Short-chain dehydrogenases of vario	3e-26
PRK12825	249	PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-26
cd05362	243	cd05362, THN_reductase-like_SDR_c, tetrahydroxynap	3e-26
PRK07326	237	PRK07326, PRK07326, short chain dehydrogenase; Pro	3e-25
COG3967	245	COG3967, DltE, Short-chain dehydrogenase involved	6e-25
cd05366	257	cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol	8e-25
cd08932	223	cd08932, HetN_like_SDR_c, HetN oxidoreductase-like	1e-24
cd05367	241	cd05367, SPR-like_SDR_c, sepiapterin reductase (SP	1e-24
cd05344	253	cd05344, BKR_like_SDR_like, putative beta-ketoacyl	2e-24
cd05329	251	cd05329, TR_SDR_c, tropinone reductase-I and II (T	2e-24
PRK12745	256	PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-prote	3e-24
cd09807	274	cd09807, retinol-DH_like_SDR_c, retinol dehydrogen	5e-24
cd05359	242	cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_c	7e-24
TIGR02415	254	TIGR02415, 23BDH, acetoin reductases	1e-23
PRK06179	270	PRK06179, PRK06179, short chain dehydrogenase; Pro	2e-23
COG4221	246	COG4221, COG4221, Short-chain alcohol dehydrogenas	2e-23
cd08945	258	cd08945, PKR_SDR_c, Polyketide ketoreductase, clas	2e-23
cd05341	247	cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta	3e-23
PRK07231	251	PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-23
pfam00106	167	pfam00106, adh_short, short chain dehydrogenase	3e-23
cd05358	253	cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (Glc	2e-22
cd05346	249	cd05346, SDR_c5, classical (c) SDR, subgroup 5	2e-22
cd05364	253	cd05364, SDR_c11, classical (c) SDR, subgroup 11	2e-22
PRK07201	657	PRK07201, PRK07201, short chain dehydrogenase; Pro	2e-22
PRK12429	258	PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenas	2e-22
PRK07454	241	PRK07454, PRK07454, short chain dehydrogenase; Pro	2e-22
cd05323	244	cd05323, ADH_SDR_c_like, insect type alcohol dehyd	3e-22
cd05338	246	cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogena	4e-22
TIGR01963	255	TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase	8e-22
cd08929	226	cd08929, SDR_c4, classical (c) SDR, subgroup 4	8e-22
PRK08643	256	PRK08643, PRK08643, acetoin reductase; Validated	9e-22
cd05352	252	cd05352, MDH-like_SDR_c, mannitol dehydrogenase (M	9e-22
PRK07666	239	PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-21
PRK06181	263	PRK06181, PRK06181, short chain dehydrogenase; Pro	2e-21
PRK06182	273	PRK06182, PRK06182, short chain dehydrogenase; Val	3e-21
PRK12937	245	PRK12937, PRK12937, short chain dehydrogenase; Pro	3e-21
cd08944	246	cd08944, SDR_c12, classical (c) SDR, subgroup 12	3e-21
PRK08213	259	PRK08213, PRK08213, gluconate 5-dehydrogenase; Pro	6e-21
cd08930	250	cd08930, SDR_c8, classical (c) SDR, subgroup 8	7e-21
TIGR01829	242	TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reducta	2e-20
cd08939	239	cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine	2e-20
PRK06197	306	PRK06197, PRK06197, short chain dehydrogenase; Pro	3e-20
PRK06914	280	PRK06914, PRK06914, short chain dehydrogenase; Pro	4e-20
PRK07774	250	PRK07774, PRK07774, short chain dehydrogenase; Pro	5e-20
cd05369	249	cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reducta	2e-19
PRK08264	238	PRK08264, PRK08264, short chain dehydrogenase; Val	2e-19
cd05337	255	cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl	2e-19
PRK07523	255	PRK07523, PRK07523, gluconate 5-dehydrogenase; Pro	4e-19
PRK12829	264	PRK12829, PRK12829, short chain dehydrogenase; Pro	7e-19
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	1e-18
PRK08226	263	PRK08226, PRK08226, short chain dehydrogenase; Pro	1e-18
cd05350	239	cd05350, SDR_c6, classical (c) SDR, subgroup 6	1e-18
PRK09072	263	PRK09072, PRK09072, short chain dehydrogenase; Pro	2e-18
PRK07063	260	PRK07063, PRK07063, short chain dehydrogenase; Pro	2e-18
cd05328	250	cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid de	2e-18
TIGR04316	250	TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxyben	2e-18
cd08942	250	cd08942, RhlG_SDR_c, RhlG and related beta-ketoacy	3e-18
cd09809	284	cd09809, human_WWOX_like_SDR_c-like, human WWOX (W	3e-18
PRK06523	260	PRK06523, PRK06523, short chain dehydrogenase; Pro	5e-18
cd09810	311	cd09810, LPOR_like_SDR_c_like, light-dependent pro	6e-18
cd05339	243	cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hy	9e-18
PRK07825	273	PRK07825, PRK07825, short chain dehydrogenase; Pro	1e-17
PRK06949	258	PRK06949, PRK06949, short chain dehydrogenase; Pro	1e-17
cd05345	248	cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl	1e-17
PRK06180	277	PRK06180, PRK06180, short chain dehydrogenase; Pro	2e-17
PRK06124	256	PRK06124, PRK06124, gluconate 5-dehydrogenase; Pro	3e-17
cd05371	252	cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydr	3e-17
cd05354	235	cd05354, SDR_c7, classical (c) SDR, subgroup 7	5e-17
cd08940	258	cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydroge	5e-17
PRK12935	247	PRK12935, PRK12935, acetoacetyl-CoA reductase; Pro	6e-17
PRK06198	260	PRK06198, PRK06198, short chain dehydrogenase; Pro	8e-17
PRK08324	681	PRK08324, PRK08324, short chain dehydrogenase; Val	9e-17
PRK12824	245	PRK12824, PRK12824, acetoacetyl-CoA reductase; Pro	1e-16
PRK10538	248	PRK10538, PRK10538, malonic semialdehyde reductase	2e-16
PRK08263	275	PRK08263, PRK08263, short chain dehydrogenase; Pro	2e-16
PRK07060	245	PRK07060, PRK07060, short chain dehydrogenase; Pro	3e-16
cd05343	250	cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, c	3e-16
PRK06138	252	PRK06138, PRK06138, short chain dehydrogenase; Pro	4e-16
PRK07062	265	PRK07062, PRK07062, short chain dehydrogenase; Pro	4e-16
cd08941	290	cd08941, 3KS_SDR_c, 3-keto steroid reductase, clas	5e-16
PRK08220	252	PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehy	5e-16
TIGR03206	250	TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxy	6e-16
PRK05650	270	PRK05650, PRK05650, short chain dehydrogenase; Pro	6e-16
PRK08265	261	PRK08265, PRK08265, short chain dehydrogenase; Pro	8e-16
PRK06841	255	PRK06841, PRK06841, short chain dehydrogenase; Pro	9e-16
PRK05855	582	PRK05855, PRK05855, short chain dehydrogenase; Val	1e-15
cd05340	236	cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-li	2e-15
cd05360	233	cd05360, SDR_c3, classical (c) SDR, subgroup 3	2e-15
PRK05854	313	PRK05854, PRK05854, short chain dehydrogenase; Pro	2e-15
cd09808	255	cd09808, DHRS-12_like_SDR_c-like, human dehydrogen	3e-15
PRK13394	262	PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenas	4e-15
PRK08217	253	PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein)	4e-15
PRK12746	254	PRK12746, PRK12746, short chain dehydrogenase; Pro	4e-15
cd08934	243	cd08934, CAD_SDR_c, clavulanic acid dehydrogenase	5e-15
PRK06196	315	PRK06196, PRK06196, oxidoreductase; Provisional	5e-15
PRK06057	255	PRK06057, PRK06057, short chain dehydrogenase; Pro	6e-15
PRK08936	261	PRK08936, PRK08936, glucose-1-dehydrogenase; Provi	6e-15
TIGR01832	248	TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogena	6e-15
cd09805	281	cd09805, type2_17beta_HSD-like_SDR_c, human 17beta	8e-15
PRK07097	265	PRK07097, PRK07097, gluconate 5-dehydrogenase; Pro	1e-14
cd05356	239	cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxyst	1e-14
PRK12936	245	PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-prote	1e-14
PRK06194	287	PRK06194, PRK06194, hypothetical protein; Provisio	1e-14
PRK12828	239	PRK12828, PRK12828, short chain dehydrogenase; Pro	1e-14
PRK07856	252	PRK07856, PRK07856, short chain dehydrogenase; Pro	2e-14
PRK07035	252	PRK07035, PRK07035, short chain dehydrogenase; Pro	2e-14
PRK12428	241	PRK12428, PRK12428, 3-alpha-hydroxysteroid dehydro	2e-14
PRK06398	258	PRK06398, PRK06398, aldose dehydrogenase; Validate	2e-14
PRK08219	227	PRK08219, PRK08219, short chain dehydrogenase; Pro	3e-14
PRK06463	255	PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-14
PRK07577	234	PRK07577, PRK07577, short chain dehydrogenase; Pro	3e-14
PRK08628	258	PRK08628, PRK08628, short chain dehydrogenase; Pro	4e-14
cd08933	261	cd08933, RDH_SDR_c, retinal dehydrogenase-like, cl	5e-14
PRK05693	274	PRK05693, PRK05693, short chain dehydrogenase; Pro	6e-14
PRK05866	293	PRK05866, PRK05866, short chain dehydrogenase; Pro	6e-14
PRK06935	258	PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrog	6e-14
PRK08589	272	PRK08589, PRK08589, short chain dehydrogenase; Val	6e-14
cd05326	249	cd05326, secoisolariciresinol-DH_like_SDR_c, secoi	7e-14
cd09761	242	cd09761, A3DFK9-like_SDR_c, Clostridium thermocell	7e-14
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	1e-13
PRK07067	257	PRK07067, PRK07067, sorbitol dehydrogenase; Provis	1e-13
PRK08945	247	PRK08945, PRK08945, putative oxoacyl-(acyl carrier	1e-13
PRK08085	254	PRK08085, PRK08085, gluconate 5-dehydrogenase; Pro	2e-13
cd05365	242	cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroi	2e-13
PRK07814	263	PRK07814, PRK07814, short chain dehydrogenase; Pro	2e-13
cd05349	246	cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl	2e-13
cd08935	271	cd08935, mannonate_red_SDR_c, putative D-mannonate	2e-13
PRK07677	252	PRK07677, PRK07677, short chain dehydrogenase; Pro	3e-13
PRK07775	274	PRK07775, PRK07775, short chain dehydrogenase; Pro	3e-13
cd09806	258	cd09806, type1_17beta-HSD-like_SDR_c, human estrog	3e-13
PRK07832	272	PRK07832, PRK07832, short chain dehydrogenase; Pro	4e-13
cd08943	250	cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate al	9e-13
PRK06125	259	PRK06125, PRK06125, short chain dehydrogenase; Pro	9e-13
PRK06172	253	PRK06172, PRK06172, short chain dehydrogenase; Pro	1e-12
PRK09730	247	PRK09730, PRK09730, putative NAD(P)-binding oxidor	1e-12
PRK12748	256	PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-prote	2e-12
PRK06701	290	PRK06701, PRK06701, short chain dehydrogenase; Pro	2e-12
PRK07453	322	PRK07453, PRK07453, protochlorophyllide oxidoreduc	2e-12
PLN02253	280	PLN02253, PLN02253, xanthoxin dehydrogenase	2e-12
PRK07109	334	PRK07109, PRK07109, short chain dehydrogenase; Pro	2e-12
cd05331	244	cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydroz	3e-12
cd05368	241	cd05368, DHRS6_like_SDR_c, human DHRS6-like, class	3e-12
PRK12827	249	PRK12827, PRK12827, short chain dehydrogenase; Pro	5e-12
cd05357	234	cd05357, PR_SDR_c, pteridine reductase (PR), class	6e-12
PRK07478	254	PRK07478, PRK07478, short chain dehydrogenase; Pro	7e-12
PRK07890	258	PRK07890, PRK07890, short chain dehydrogenase; Pro	8e-12
PRK05717	255	PRK05717, PRK05717, oxidoreductase; Validated	9e-12
PRK06123	248	PRK06123, PRK06123, short chain dehydrogenase; Pro	1e-11
TIGR01289	314	TIGR01289, LPOR, light-dependent protochlorophylli	1e-11
PRK06500	249	PRK06500, PRK06500, short chain dehydrogenase; Pro	1e-11
PRK12743	256	PRK12743, PRK12743, oxidoreductase; Provisional	2e-11
PRK06953	222	PRK06953, PRK06953, short chain dehydrogenase; Pro	2e-11
PRK07074	257	PRK07074, PRK07074, short chain dehydrogenase; Pro	2e-11
PRK07023	243	PRK07023, PRK07023, short chain dehydrogenase; Pro	2e-11
PRK09186	256	PRK09186, PRK09186, flagellin modification protein	2e-11
PRK06947	248	PRK06947, PRK06947, glucose-1-dehydrogenase; Provi	3e-11
cd09762	243	cd09762, HSDL2_SDR_c, human hydroxysteroid dehydro	3e-11
cd08931	227	cd08931, SDR_c9, classical (c) SDR, subgroup 9	3e-11
cd09763	265	cd09763, DHRS1-like_SDR_c, human dehydrogenase/red	5e-11
PRK06114	254	PRK06114, PRK06114, short chain dehydrogenase; Pro	7e-11
PRK12938	246	PRK12938, PRK12938, acetyacetyl-CoA reductase; Pro	7e-11
PRK06128	300	PRK06128, PRK06128, oxidoreductase; Provisional	7e-11
cd05351	244	cd05351, XR_like_SDR_c, xylulose reductase-like, c	8e-11
PRK12481	251	PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrog	8e-11
PRK12747	252	PRK12747, PRK12747, short chain dehydrogenase; Pro	1e-10
cd05355	270	cd05355, SDR_c1, classical (c) SDR, subgroup 1	1e-10
PRK07806	248	PRK07806, PRK07806, short chain dehydrogenase; Pro	1e-10
PLN00015	308	PLN00015, PLN00015, protochlorophyllide reductase	2e-10
PRK08277	278	PRK08277, PRK08277, D-mannonate oxidoreductase; Pr	2e-10
PRK08063	250	PRK08063, PRK08063, enoyl-(acyl carrier protein) r	4e-10
PRK07792	306	PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein)	4e-10
PRK08278	273	PRK08278, PRK08278, short chain dehydrogenase; Pro	5e-10
cd08936	256	cd08936, CR_SDR_c, Porcine peroxisomal carbonyl re	5e-10
cd08937	256	cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa	6e-10
PRK06077	252	PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein)	7e-10
PRK07069	251	PRK07069, PRK07069, short chain dehydrogenase; Val	1e-09
PRK06940	275	PRK06940, PRK06940, short chain dehydrogenase; Pro	2e-09
pfam08659	181	pfam08659, KR, KR domain	2e-09
PRK08642	253	PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-09
PRK12384	259	PRK12384, PRK12384, sorbitol-6-phosphate dehydroge	2e-09
PRK06171	266	PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydro	2e-09
PRK08267	260	PRK08267, PRK08267, short chain dehydrogenase; Pro	2e-09
PRK06550	235	PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-09
cd05373	238	cd05373, SDR_c10, classical (c) SDR, subgroup 10	3e-09
PRK12742	237	PRK12742, PRK12742, oxidoreductase; Provisional	3e-09
PRK08251	248	PRK08251, PRK08251, short chain dehydrogenase; Pro	3e-09
TIGR03971	265	TIGR03971, SDR_subfam_1, oxidoreductase, SDR famil	4e-09
PRK05867	253	PRK05867, PRK05867, short chain dehydrogenase; Pro	4e-09
PRK07831	262	PRK07831, PRK07831, short chain dehydrogenase; Pro	5e-09
PRK12859	256	PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-prote	5e-09
PRK06139	330	PRK06139, PRK06139, short chain dehydrogenase; Pro	8e-09
PRK08261	450	PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-08
TIGR01500	256	TIGR01500, sepiapter_red, sepiapterin reductase	1e-08
cd05330	257	cd05330, cyclohexanol_reductase_SDR_c, cyclohexano	1e-08
pfam01370	233	pfam01370, Epimerase, NAD dependent epimerase/dehy	2e-08
PRK06924	251	PRK06924, PRK06924, short chain dehydrogenase; Pro	2e-08
PRK06113	255	PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydro	2e-08
PRK06483	236	PRK06483, PRK06483, dihydromonapterin reductase; P	4e-08
PRK05993	277	PRK05993, PRK05993, short chain dehydrogenase; Pro	4e-08
cd05363	254	cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH),	5e-08
PRK08177	225	PRK08177, PRK08177, short chain dehydrogenase; Pro	7e-08
PRK07024	257	PRK07024, PRK07024, short chain dehydrogenase; Pro	8e-08
PRK05872	296	PRK05872, PRK05872, short chain dehydrogenase; Pro	1e-07
PLN02780	320	PLN02780, PLN02780, ketoreductase/ oxidoreductase	1e-07
COG0451	314	COG0451, WcaG, Nucleoside-diphosphate-sugar epimer	2e-07
PRK08703	239	PRK08703, PRK08703, short chain dehydrogenase; Pro	2e-07
PRK08340	259	PRK08340, PRK08340, glucose-1-dehydrogenase; Provi	3e-07
PRK06482	276	PRK06482, PRK06482, short chain dehydrogenase; Pro	3e-07
PRK07576	264	PRK07576, PRK07576, short chain dehydrogenase; Pro	3e-07
PRK08993	253	PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrog	5e-07
PRK08017	256	PRK08017, PRK08017, oxidoreductase; Provisional	5e-07
cd08953	436	cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup	5e-07
PRK05786	238	PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein)	6e-07
PRK06200	263	PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydropheny	6e-07
PRK07102	243	PRK07102, PRK07102, short chain dehydrogenase; Pro	7e-07
cd05322	257	cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehy	1e-06
pfam13561	239	pfam13561, adh_short_C2, Enoyl-(Acyl carrier prote	1e-06
TIGR02632	676	TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate	1e-06
cd05353	250	cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-	1e-06
PRK08303	305	PRK08303, PRK08303, short chain dehydrogenase; Pro	2e-06
PRK07041	230	PRK07041, PRK07041, short chain dehydrogenase; Pro	2e-06
PRK09291	257	PRK09291, PRK09291, short chain dehydrogenase; Pro	3e-06
PRK07985	294	PRK07985, PRK07985, oxidoreductase; Provisional	5e-06
PRK06720	169	PRK06720, PRK06720, hypothetical protein; Provisio	5e-06
smart00822	180	smart00822, PKS_KR, This enzymatic domain is part	8e-06
cd08958	293	cd08958, FR_SDR_e, flavonoid reductase (FR), exten	9e-06
PRK08339	263	PRK08339, PRK08339, short chain dehydrogenase; Pro	1e-05
PRK12823	260	PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1	2e-05
cd05372	250	cd05372, ENR_SDR, Enoyl acyl carrier protein (ACP)	2e-05
cd05348	257	cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydro	3e-05
PRK09135	249	PRK09135, PRK09135, pteridine reductase; Provision	3e-05
PRK07791	286	PRK07791, PRK07791, short chain dehydrogenase; Pro	3e-05
PRK08862	227	PRK08862, PRK08862, short chain dehydrogenase; Pro	7e-05
cd11731	198	cd11731, Lin1944_like_SDR_c, Lin1944 and related p	8e-05
COG0623	259	COG0623, FabI, Enoyl-[acyl-carrier-protein]	1e-04
cd05274	375	cd05274, KR_FAS_SDR_x, ketoreductase (KR) and fatt	2e-04
cd05254	280	cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4	2e-04
cd05243	203	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5	2e-04
cd02266	186	cd02266, SDR, Short-chain dehydrogenases/reductase	2e-04
PRK05876	275	PRK05876, PRK05876, short chain dehydrogenase; Pro	4e-04
cd05269	272	cd05269, TMR_SDR_a, triphenylmethane reductase (TM	4e-04
TIGR01831	239	TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-prote	6e-04
pfam13460	182	pfam13460, NAD_binding_10, NADH(P)-binding	0.001
PRK08416	260	PRK08416, PRK08416, 7-alpha-hydroxysteroid dehydro	0.001
TIGR03466	328	TIGR03466, HpnA, hopanoid-associated sugar epimera	0.002
PRK08415	274	PRK08415, PRK08415, enoyl-(acyl carrier protein) r	0.002
PRK07370	258	PRK07370, PRK07370, enoyl-(acyl carrier protein) r	0.002
cd01078	194	cd01078, NAD_bind_H4MPT_DH, NADP binding domain of	0.002
PRK08261	450	PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein)	0.003
PRK09134	258	PRK09134, PRK09134, short chain dehydrogenase; Pro	0.003
cd05228	318	cd05228, AR_FR_like_1_SDR_e, uncharacterized subgr	0.003

>gnl|CDD|187585 cd05324, carb_red_PTCR-like_SDR_c, Porcine testicular carbonyl reductase (PTCR)-like, classical (c) SDRs

 Score =  242 bits (621), Expect = 1e-80
 Identities = 110/263 (41%), Positives = 147/263 (55%), Gaps = 50/263 (19%)

Query: 32  IAIVTGANKGIGFALVKRLAELG-LTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSD 90
           +A+VTGAN+GIGF +V++LA+ G  TVILTARDVERGQ AVE L  +GL V F QLDV+D
Sbjct: 2   VALVTGANRGIGFEIVRQLAKSGPGTVILTARDVERGQAAVEKLRAEGLSVRFHQLDVTD 61

Query: 91  PSSIEAFVSWFKSNFAALDILVNNAGVSF--NDIYKNTVEHAETVIRTNFYGAKLLTESL 148
            +SIEA   + +  +  LDILVNNAG++F   D    T E A   ++TNF+G   +T++L
Sbjct: 62  DASIEAAADFVEEKYGGLDILVNNAGIAFKGFDDSTPTREQARETMKTNFFGTVDVTQAL 121

Query: 149 LPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGT 208
           LPL ++SP+  RI+N+SS LG+L                                     
Sbjct: 122 LPLLKKSPA-GRIVNVSSGLGSL------------------------------------- 143

Query: 209 WKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTAD 268
                     + Y VSK ALNA T +LAK  +  GI VN+ CPG+ +T M  G+   T +
Sbjct: 144 ---------TSAYGVSKAALNALTRILAKELKETGIKVNACCPGWVKTDMGGGKAPKTPE 194

Query: 269 EAADVGARLLLLHPQQLPTAKFY 291
           E A+    L LL P   PT KF+
Sbjct: 195 EGAETPVYLALLPPDGEPTGKFF 217

PTCR is a classical SDR which catalyzes the NADPH-dependent reduction of ketones on steroids and prostaglandins. Unlike most SDRs, PTCR functions as a monomer. This subgroup also includes human carbonyl reductase 1 (CBR1) and CBR3. CBR1 is an NADPH-dependent SDR with broad substrate specificity and may be responsible for the in vivo reduction of quinones, prostaglandins, and other carbonyl-containing compounds. In addition it includes poppy NADPH-dependent salutaridine reductase which catalyzes the stereospecific reduction of salutaridine to 7(S)-salutaridinol in the biosynthesis of morphine, and Arabidopsis SDR1,a menthone reductase, which catalyzes the reduction of menthone to neomenthol, a compound with antimicrobial activity; SDR1 can also carry out neomenthol oxidation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 225

>gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs

 Score =  152 bits (387), Expect = 3e-45
 Identities = 73/240 (30%), Positives = 95/240 (39%), Gaps = 45/240 (18%)

Query: 33  AIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPS 92
           A+VTGA+ GIG A+ +RLA  G  V+L  R+ E        +   G      Q DVSD  
Sbjct: 1   ALVTGASSGIGRAIARRLAREGAKVVLADRNEEALAELAA-IEALGGNAVAVQADVSDEE 59

Query: 93  SIEAFVSWFKSNFAALDILVNNAGVS-FNDIYKNTVEHAETVIRTNFYGAKLLTESLLPL 151
            +EA V      F  LDILVNNAG++    + + T E  + V+  N  G  LLT + LP 
Sbjct: 60  DVEALVEEALEEFGRLDILVNNAGIARPGPLEELTDEDWDRVLDVNLTGVFLLTRAALPH 119

Query: 152 FRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKS 211
            ++     RI+NISS  G                                          
Sbjct: 120 MKKQGG-GRIVNISSVAG-----------------------------------------L 137

Query: 212 QGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTADEAA 271
           +  P     YA SK AL   T  LA      GI VN+  PG   T M    G   A++  
Sbjct: 138 RPLPG-QAAYAASKAALEGLTRSLALELAPYGIRVNAVAPGLVDTPMLAKLGPEEAEKEL 196

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234

>gnl|CDD|212492 cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs

 Score =  150 bits (381), Expect = 6e-44
 Identities = 72/230 (31%), Positives = 109/230 (47%), Gaps = 34/230 (14%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLP--VNFFQLDVS 89
           + ++TGAN GIG    + LA+ G  VI+  R+ E+G+ A   + ++     V   QLD+S
Sbjct: 3   VVVITGANSGIGKETARELAKRGAHVIIACRNEEKGEEAAAEIKKETGNAKVEVIQLDLS 62

Query: 90  DPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLL 149
             +S+  F   F + F  LDIL+NNAG+      + T +  E     N+ G  LLT  LL
Sbjct: 63  SLASVRQFAEEFLARFPRLDILINNAGI-MAPPRRLTKDGFELQFAVNYLGHFLLTNLLL 121

Query: 150 PLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKD-GT 208
           P+ + S   SRI+N+SS                             F  L L++ K+   
Sbjct: 122 PVLKASAP-SRIVNVSSIAHRAGP--------------------IDFNDLDLENNKEYSP 160

Query: 209 WKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSM 258
           +K+         Y  SKLA   +T  LA+R EG G++VN+  PG  +T +
Sbjct: 161 YKA---------YGQSKLANILFTRELARRLEGTGVTVNALHPGVVRTEL 201

Classical SDR subgroup containing retinol-DHs, LPORs, and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Pchlide reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14, dehydrogenase/reductase SDR family member (DHRS)-12 , -13 and -X (a DHRS on chromosome X), and WWOX (WW domain-containing oxidoreductase), as well as a Neurospora crassa SDR encoded by the blue light inducible bli-4 gene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 269

>gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

 Score =  140 bits (354), Expect = 4e-40
 Identities = 80/254 (31%), Positives = 106/254 (41%), Gaps = 52/254 (20%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERG--QRAVESLSEKGLP-VNFFQLDV 88
           +A+VTGA+ GIG A+ + LA  G  V++ AR  E    +    ++ E G         DV
Sbjct: 7   VALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADV 66

Query: 89  SD-PSSIEAFVSWFKSNFAALDILVNNAGV--SFNDIYKNTVEHAETVIRTNFYGAKLLT 145
           SD   S+EA V+  +  F  +DILVNNAG+      + + T E  + VI  N  GA LLT
Sbjct: 67  SDDEESVEALVAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLT 126

Query: 146 ESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVK 205
            + LPL +    K RI+NISS  G                                    
Sbjct: 127 RAALPLMK----KQRIVNISSVAG------------------------------------ 146

Query: 206 DGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSH 265
                  G P     YA SK AL   T  LA      GI VN+  PG+  T MT    S 
Sbjct: 147 ------LGGPPGQAAYAASKAALIGLTKALALELAPRGIRVNAVAPGYIDTPMTAALESA 200

Query: 266 TADEAADVGARLLL 279
             +    + AR+ L
Sbjct: 201 ELEALKRLAARIPL 214

Length = 251

>gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score =  125 bits (317), Expect = 1e-34
 Identities = 68/242 (28%), Positives = 98/242 (40%), Gaps = 46/242 (19%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
            A+VTGA++GIG A+  RLA  G  V++   + E  +     L   G        DVSD 
Sbjct: 7   TALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDE 66

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSFND--IYKNTVEHAETVIRTNFYGAKLLTESLL 149
           +++ A +      F ALDILVNNAG+   D  + + + E  + VI  N  G   +  + L
Sbjct: 67  AAVRALIEAAVEAFGALDILVNNAGI-TRDALLPRMSEEDWDRVIDVNLTGTFNVVRAAL 125

Query: 150 PLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTW 209
           P   ++    RI+NISS  G      NP                                
Sbjct: 126 PPMIKA-RYGRIVNISSVSG---VTGNPG------------------------------- 150

Query: 210 KSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTADE 269
                    T+Y+ +K  +  +T  LA      GI+VN+  PGF  T MT+G       E
Sbjct: 151 --------QTNYSAAKAGVIGFTKALALELASRGITVNAVAPGFIDTDMTEGLPEEVKAE 202

Query: 270 AA 271
             
Sbjct: 203 IL 204

Length = 246

>gnl|CDD|235500 PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score =  122 bits (310), Expect = 1e-33
 Identities = 71/230 (30%), Positives = 102/230 (44%), Gaps = 45/230 (19%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERG-QRAVESLSEKGLPVNFFQLDVSD 90
           +A+VTGA++GIG A+ +RLA  G  V++     E G +  V  +   G      Q DVSD
Sbjct: 7   VALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSD 66

Query: 91  PSSIEAFVSWFKSNFAALDILVNNAGVSF-NDIYKNTVEHAETVIRTNFYGAKLLTESLL 149
             S+E  V   K+ F  +DILVNNAG++  N + +   E  + VI TN  G   LT+++ 
Sbjct: 67  AESVERAVDEAKAEFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVA 126

Query: 150 PLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTW 209
               +  S  RI+NISS +G +      N                               
Sbjct: 127 RPMMKQRS-GRIINISSVVGLMGNPGQAN------------------------------- 154

Query: 210 KSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMT 259
                      YA SK  +  +T  LA+     GI+VN+  PGF +T MT
Sbjct: 155 -----------YAASKAGVIGFTKSLARELASRGITVNAVAPGFIETDMT 193

Length = 248

>gnl|CDD|187586 cd05325, carb_red_sniffer_like_SDR_c, carbonyl reductase sniffer-like, classical (c) SDRs

 Score =  121 bits (306), Expect = 3e-33
 Identities = 72/249 (28%), Positives = 109/249 (43%), Gaps = 52/249 (20%)

Query: 33  AIVTGANKGIGFALVKRLAELG-LTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
            ++TGA++GIG  LV++L   G  TVI T RD       + +L      ++  +LDV+D 
Sbjct: 1   VLITGASRGIGLELVRQLLARGNNTVIATCRDPS-AATELAALGASHSRLHILELDVTDE 59

Query: 92  --SSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTV--EHAETVIRTNFYGAKLLTES 147
              S EA         A LD+L+NNAG+  +    + V  E    V + N  G  LLT++
Sbjct: 60  IAESAEAVAERLGD--AGLDVLINNAGILHSYGPASEVDSEDLLEVFQVNVLGPLLLTQA 117

Query: 148 LLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDG 207
            LPL  +  ++++I+NISSR+G++                                   G
Sbjct: 118 FLPLLLKG-ARAKIINISSRVGSIG------------------------------DNTSG 146

Query: 208 TWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSH-- 265
            W S         Y  SK ALN  T  LA   + +GI+V S  PG+ +T M      +  
Sbjct: 147 GWYS---------YRASKAALNMLTKSLAVELKRDGITVVSLHPGWVRTDMGGPFAKNKG 197

Query: 266 --TADEAAD 272
             T +E+  
Sbjct: 198 PITPEESVA 206

Sniffer is an NADPH-dependent carbonyl reductase of the classical SDR family. Studies in Drosophila melanogaster implicate Sniffer in the prevention of neurodegeneration due to aging and oxidative-stress. This subgroup also includes Rhodococcus sp. AD45 IsoH, which is an NAD-dependent 1-hydroxy-2-glutathionyl-2-methyl-3-butene dehydrogenase involved in isoprene metabolism, Aspergillus nidulans StcE encoded by a gene which is part of a proposed sterigmatocystin biosynthesis gene cluster, Bacillus circulans SANK 72073 BtrF encoded by a gene found in the butirosin biosynthesis gene cluster, and Aspergillus parasiticus nor-1 involved in the biosynthesis of aflatoxins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 233

>gnl|CDD|187628 cd05370, SDR_c2, classical (c) SDR, subgroup 2

 Score =  120 bits (303), Expect = 7e-33
 Identities = 66/261 (25%), Positives = 106/261 (40%), Gaps = 62/261 (23%)

Query: 33  AIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPS 92
            ++TG   GIG AL ++  E G TVI+T R  ER   A + L      ++   LDV D  
Sbjct: 8   VLITGGTSGIGLALARKFLEAGNTVIITGRREERLAEAKKELPN----IHTIVLDVGDAE 63

Query: 93  SIEAFVSWFKSNFAALDILVNNAGVSFN-DIYKN--TVEHAETVIRTNFYGAKLLTESLL 149
           S+EA      S +  LDIL+NNAG+    D+      ++ A+T I TN  G   L ++ L
Sbjct: 64  SVEALAEALLSEYPNLDILINNAGIQRPIDLRDPASDLDKADTEIDTNLIGPIRLIKAFL 123

Query: 150 PLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTW 209
           P  ++ P ++ I+N+SS L  +    NP                                
Sbjct: 124 PHLKKQP-EATIVNVSSGLAFVPMAANPV------------------------------- 151

Query: 210 KSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTADE 269
                      Y  +K AL++YT+ L  + +  G+ V    P    T + + + +     
Sbjct: 152 -----------YCATKAALHSYTLALRHQLKDTGVEVVEIVPPAVDTELHEERRNPDGG- 199

Query: 270 AADVGARLLLLHPQQLPTAKF 290
                       P+++P  +F
Sbjct: 200 -----------TPRKMPLDEF 209

Short-chain dehydrogenases/reductases (SDRs, aka Tyrosine-dependent oxidoreductases) are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 228

>gnl|CDD|187594 cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs

 Score =  116 bits (293), Expect = 4e-31
 Identities = 71/229 (31%), Positives = 104/229 (45%), Gaps = 44/229 (19%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           +A+VTGA++GIG A+  RLA  G  V +T R  E     VE +   G      + DVSD 
Sbjct: 2   VALVTGASRGIGRAIALRLAAEGAKVAVTDRSEEAAAETVEEIKALGGNAAALEADVSDR 61

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSF-NDIYKNTVEHAETVIRTNFYGAKLLTESLLP 150
            ++EA V   ++ F  +DILVNNAG++  N + + + E  + VI  N  G   +T++++ 
Sbjct: 62  EAVEALVEKVEAEFGPVDILVNNAGITRDNLLMRMSEEDWDAVINVNLTGVFNVTQAVIR 121

Query: 151 LFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWK 210
              +     RI+NISS +G    + NP              Q                  
Sbjct: 122 AMIKR-RSGRIINISSVVG---LIGNPG-------------Q------------------ 146

Query: 211 SQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMT 259
                    +YA SK  +  +T  LAK     GI+VN+  PGF  T MT
Sbjct: 147 --------ANYAASKAGVIGFTKSLAKELASRGITVNAVAPGFIDTDMT 187

This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 240

>gnl|CDD|183833 PRK12939, PRK12939, short chain dehydrogenase; Provisional

 Score =  115 bits (291), Expect = 6e-31
 Identities = 61/229 (26%), Positives = 91/229 (39%), Gaps = 44/229 (19%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
            A+VTGA +G+G A  + LAE G TV          +    +L   G   +    D++DP
Sbjct: 9   RALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADP 68

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVS-FNDIYKNTVEHAETVIRTNFYGAKLLTESLLP 150
           +S++ F     +    LD LVNNAG++      +  ++  + V+  N  G  L+  + LP
Sbjct: 69  ASVQRFFDAAAAALGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALP 128

Query: 151 LFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWK 210
             R S    RI+N++S                  D  L                    W 
Sbjct: 129 HLRDSGR-GRIVNLAS------------------DTAL--------------------WG 149

Query: 211 SQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMT 259
           +         Y  SK A+   T  LA+   G GI+VN+  PG T T  T
Sbjct: 150 APKLGA----YVASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEAT 194

Length = 250

>gnl|CDD|235506 PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  114 bits (289), Expect = 1e-30
 Identities = 72/233 (30%), Positives = 96/233 (41%), Gaps = 49/233 (21%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVIL-TARDVERGQRAVESLSEKGLPVNFFQLDVSD 90
           +AIVTGA+ GIG A+ + LA+ G  V++    + E  Q  +E + E+G      + DVS 
Sbjct: 7   VAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSS 66

Query: 91  PSSIEAFVSWFKSNFAALDILVNNAGVS-FNDIYKNTVEHAETVIRTNFYGAKLLTESLL 149
              +E  V      F  +DILVNNAG+S F  +   T E  + VI  N  G  LLT   L
Sbjct: 67  EEDVENLVEQIVEKFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYAL 126

Query: 150 PLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTW 209
           P   +  S   I+NISS                                          W
Sbjct: 127 PYMIKRKSGV-IVNISS-----------------------------------------IW 144

Query: 210 KSQGWP--EIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ 260
              G     +   Y+ SK A+NA+T  LAK     GI VN+  PG   T M  
Sbjct: 145 GLIGASCEVL---YSASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWS 194

Length = 247

>gnl|CDD|183775 PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

 Score =  113 bits (286), Expect = 5e-30
 Identities = 71/244 (29%), Positives = 95/244 (38%), Gaps = 49/244 (20%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           +A+VTGA +GIG A+  RLA  G  VI+     +      E +   G      Q+DV D 
Sbjct: 8   VALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDR 67

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVS----FNDIYKNTVEHAETVIRTNFYGAKLLTES 147
           ++++A V+    +F  LDILV NAG+     F ++     E  E VI  N  G  LLT++
Sbjct: 68  AALKAAVAAGVEDFGRLDILVANAGIFPLTPFAEM---DDEQWERVIDVNLTGTFLLTQA 124

Query: 148 LLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDG 207
            LP   R+    RI+  SS  G   +V  P                              
Sbjct: 125 ALPALIRA-GGGRIVLTSSVAG--PRVGYPG----------------------------- 152

Query: 208 TWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTA 267
                        YA SK  L  +T  LA       I+VNS  PG   T M    G    
Sbjct: 153 ----------LAHYAASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNLGDAQW 202

Query: 268 DEAA 271
            EA 
Sbjct: 203 AEAI 206

Length = 251

>gnl|CDD|187593 cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxysteroid dehydrogenase type 1 (11beta-HSD1)-like, classical (c) SDRs

 Score =  113 bits (285), Expect = 6e-30
 Identities = 63/229 (27%), Positives = 92/229 (40%), Gaps = 45/229 (19%)

Query: 34  IVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNF-FQLDVSDPS 92
           I+TGA+ GIG  L   LA LG  ++L+AR  ER +       E G P      LD+SD  
Sbjct: 7   IITGASSGIGEELAYHLARLGARLVLSARREERLEEVKSECLELGAPSPHVVPLDMSDLE 66

Query: 93  SIEAFVSWFKSNFAALDILVNNAGVS-FNDIYKNTVEHAETVIRTNFYGAKLLTESLLPL 151
             E  V      F  LDIL+NNAG+S  +  +  +++    ++  N++G   LT++ LP 
Sbjct: 67  DAEQVVEEALKLFGGLDILINNAGISMRSLFHDTSIDVDRKIMEVNYFGPVALTKAALPH 126

Query: 152 FRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKS 211
                S+  I+ +SS  G                           +G+  +         
Sbjct: 127 LIER-SQGSIVVVSSIAG--------------------------KIGVPFR--------- 150

Query: 212 QGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ 260
                  T YA SK AL  +   L        ISV   CPG   T++  
Sbjct: 151 -------TAYAASKHALQGFFDSLRAELSEPNISVTVVCPGLIDTNIAM 192

Human 11beta_HSD1 catalyzes the NADP(H)-dependent interconversion of cortisone and cortisol. This subgroup also includes human dehydrogenase/reductase SDR family member 7C (DHRS7C) and DHRS7B. These proteins have the GxxxGxG nucleotide binding motif and S-Y-K catalytic triad characteristic of the SDRs, but have an atypical C-terminal domain that contributes to homodimerization contacts. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|233590 TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier-protein) reductase

 Score =  112 bits (282), Expect = 1e-29
 Identities = 72/232 (31%), Positives = 103/232 (44%), Gaps = 51/232 (21%)

Query: 33  AIVTGANKGIGFALVKRLAELGLTVILT-ARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           A+VTGA++GIG A+  +LA+ G  VI+T     E  +  VE L   G+       DVSD 
Sbjct: 1   ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDR 60

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSFND--IYKNTVEHAETVIRTNFYGAKLLTESLL 149
             ++A V   +     +DILVNNAG++  D  + +   E  + VI TN  G   LT+++L
Sbjct: 61  EDVKAVVEEIEEELGPIDILVNNAGIT-RDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVL 119

Query: 150 P--LFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDG 207
              + +RS    RI+NISS +G +    N               Q               
Sbjct: 120 RIMIKQRS---GRIINISSVVGLMG---NAG-------------Q--------------- 145

Query: 208 TWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMT 259
                       +YA SK  +  +T  LAK      I+VN+  PGF  T MT
Sbjct: 146 -----------ANYAASKAGVIGFTKSLAKELASRNITVNAVAPGFIDTDMT 186

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|181721 PRK09242, PRK09242, tropinone reductase; Provisional

 Score =  110 bits (276), Expect = 1e-28
 Identities = 67/245 (27%), Positives = 105/245 (42%), Gaps = 52/245 (21%)

Query: 23  STKWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEK--GLP 80
             +W      A++TGA+KGIG A+ +    LG  V++ ARD +   +A + L+E+     
Sbjct: 2   QHRWRLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPERE 61

Query: 81  VNFFQLDVSDPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAET----VIRT 136
           V+    DVSD     A + W + ++  L ILVNNAG    +I K  +++ E     +  T
Sbjct: 62  VHGLAADVSDDEDRRAILDWVEDHWDGLHILVNNAGG---NIRKAAIDYTEDEWRGIFET 118

Query: 137 NFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERF 196
           N + A  L+    PL ++  + S I+NI S  G                           
Sbjct: 119 NLFSAFELSRYAHPLLKQH-ASSAIVNIGSVSG--------------------------- 150

Query: 197 VGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQT 256
               L  V+ G             Y ++K AL   T  LA  +  +GI VN+  P + +T
Sbjct: 151 ----LTHVRSG-----------APYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRT 195

Query: 257 SMTQG 261
            +T G
Sbjct: 196 PLTSG 200

Length = 257

>gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score =  107 bits (270), Expect = 9e-28
 Identities = 48/145 (33%), Positives = 75/145 (51%), Gaps = 11/145 (7%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           + ++TG + GIG AL   LA  G  VI TAR+ ++ +   E L++    +   +LDV+D 
Sbjct: 2   VVLITGCSSGIGLALALALAAQGYRVIATARNPDKLESLGELLNDNLEVL---ELDVTDE 58

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVS----FNDIYKNTVEHAETVIRTNFYGAKLLTES 147
            SI+A V      F  +D+LVNNAG        +    ++E    +   N +G   +T +
Sbjct: 59  ESIKAAVKEVIERFGRIDVLVNNAGYGLFGPLEET---SIEEVRELFEVNVFGPLRVTRA 115

Query: 148 LLPLFRRSPSKSRILNISSRLGTLS 172
            LPL R+  S  RI+N+SS  G + 
Sbjct: 116 FLPLMRKQGS-GRIVNVSSVAGLVP 139

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|187605 cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs

 Score =  104 bits (262), Expect = 1e-26
 Identities = 61/234 (26%), Positives = 100/234 (42%), Gaps = 44/234 (18%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           +A+VTGA++GIGF +   LAE G  +++ +R+ E+ + A + + ++G+    F  DVSD 
Sbjct: 7   VALVTGASRGIGFGIASGLAEAGANIVINSRNEEKAEEAQQLIEKEGVEATAFTCDVSDE 66

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSF-NDIYKNTVEHAETVIRTNFYGAKLLTESLLP 150
            +I+A V   + +F  +DILVNNAG+   +   +        VI  N  G   +++++  
Sbjct: 67  EAIKAAVEAIEEDFGKIDILVNNAGIIRRHPAEEFPEAEWRDVIDVNLNGVFFVSQAVAR 126

Query: 151 LFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWK 210
              +     +I+NI S L  L     P                                 
Sbjct: 127 HMIKQGH-GKIINICSLLSELGGPPVPA-------------------------------- 153

Query: 211 SQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGS 264
                     YA SK  +   T  LA  +   GI VN+  PG+  T MT+   +
Sbjct: 154 ----------YAASKGGVAGLTKALATEWARHGIQVNAIAPGYFATEMTEAVVA 197

Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|223377 COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only]

 Score =  104 bits (261), Expect = 3e-26
 Identities = 59/234 (25%), Positives = 99/234 (42%), Gaps = 45/234 (19%)

Query: 33  AIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEK-GLPVNFFQLDVSDP 91
           A++TGA+ GIG  L K+LA  G  +IL AR  ++ +   + L +K G+ V     D+SDP
Sbjct: 9   ALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDP 68

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVS-FNDIYKNTVEHAETVIRTNFYGAKLLTESLLP 150
            ++E      K     +D+LVNNAG   F    + +++  E +I+ N      LT+++LP
Sbjct: 69  EALERLEDELKERGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLP 128

Query: 151 LFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWK 210
                     I+NI S  G                               + +       
Sbjct: 129 GMVER-GAGHIINIGSAAG------------------------------LIPTPYMAV-- 155

Query: 211 SQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGS 264
                     Y+ +K  + +++  L +  +G G+ V + CPG T+T     +GS
Sbjct: 156 ----------YSATKAFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFDAKGS 199

Length = 265

>gnl|CDD|237218 PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  103 bits (259), Expect = 3e-26
 Identities = 71/231 (30%), Positives = 100/231 (43%), Gaps = 49/231 (21%)

Query: 33  AIVTGANKGIGFALVKRLAELGLTVILTAR-DVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           A+VTGA +G+G A+  RLA  G  V++  R D E  +  VE++   G      Q DV+D 
Sbjct: 9   ALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDK 68

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSFND--IYKNTVEHAETVIRTNFYGAKLLTESLL 149
           +++EA V+     F  +DILVNNAG+ F D  +   + +  + VI  N  G   L  +++
Sbjct: 69  AALEAAVAAAVERFGRIDILVNNAGI-FEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVV 127

Query: 150 PLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTW 209
           P  R+     RI+NISS                              V            
Sbjct: 128 PPMRKQ-RGGRIVNISS------------------------------VAGLP-------- 148

Query: 210 KSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGE-GISVNSYCPGFTQTSMT 259
              GWP   ++YA +K  L   T  LA R   E GI+VN   PG   T M 
Sbjct: 149 ---GWPG-RSNYAAAKAGLVGLTKALA-RELAEYGITVNMVAPGDIDTDMK 194

Length = 249

>gnl|CDD|187620 cd05362, THN_reductase-like_SDR_c, tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs

 Score =  103 bits (259), Expect = 3e-26
 Identities = 72/242 (29%), Positives = 100/242 (41%), Gaps = 47/242 (19%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILT-ARDVERGQRAVESLSEKGLPVNFFQLDVSD 90
           +A+VTGA++GIG A+ KRLA  G +V++  A      +  V  +   G      Q DVSD
Sbjct: 5   VALVTGASRGIGRAIAKRLARDGASVVVNYASSKAAAEEVVAEIEAAGGKAIAVQADVSD 64

Query: 91  PSSIEAFVSWFKSNFAALDILVNNAGV-SFNDIYKNTVEHAETVIRTNFYGAKLLTESLL 149
           PS +       +  F  +DILVNNAGV     I + + E  + +   N  GA  + +   
Sbjct: 65  PSQVARLFDAAEKAFGGVDILVNNAGVMLKKPIAETSEEEFDRMFTVNTKGAFFVLQEAA 124

Query: 150 PLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTW 209
              R      RI+NISS   +L+    PN                               
Sbjct: 125 KRLRDG---GRIINISS---SLTAAYTPN------------------------------- 147

Query: 210 KSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTADE 269
                   +  YA SK A+ A+T VLAK   G GI+VN+  PG   T M     +  A E
Sbjct: 148 --------YGAYAGSKAAVEAFTRVLAKELGGRGITVNAVAPGPVDTDMFYAGKTEEAVE 199

Query: 270 AA 271
             
Sbjct: 200 GY 201

1,3,6,8-tetrahydroxynaphthalene reductase (4HNR) of Magnaporthe grisea and the related 1,3,8-trihydroxynaphthalene reductase (3HNR) are typical members of the SDR family containing the canonical glycine rich NAD(P)-binding site and active site tetrad, and function in fungal melanin biosynthesis. This subgroup also includes an SDR from Norway spruce that may function to protect against both biotic and abitoic stress. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|235990 PRK07326, PRK07326, short chain dehydrogenase; Provisional

 Score =  100 bits (251), Expect = 3e-25
 Identities = 51/141 (36%), Positives = 74/141 (52%), Gaps = 8/141 (5%)

Query: 33  AIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKG--LPVNFFQLDVSD 90
           A++TG +KGIGFA+ + L   G  V +TARD +  + A   L+ KG  L +     DV D
Sbjct: 9   ALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGL---AADVRD 65

Query: 91  PSSIEAFVSWFKSNFAALDILVNNAGVS-FNDIYKNTVEHAETVIRTNFYGAKLLTESLL 149
            + ++  V    + F  LD+L+ NAGV  F  + + T E    VI TN  GA    ++ +
Sbjct: 66  EADVQRAVDAIVAAFGGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAV 125

Query: 150 PLFRRSPSKSRILNISSRLGT 170
           P  +R      I+NISS  GT
Sbjct: 126 PALKR--GGGYIINISSLAGT 144

Length = 237

>gnl|CDD|226476 COG3967, DltE, Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

 Score = 99.8 bits (249), Expect = 6e-25
 Identities = 55/150 (36%), Positives = 74/150 (49%), Gaps = 9/150 (6%)

Query: 31  TIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSD 90
           TI I TG   GIG AL KR  ELG TVI+  R+ ER   A     E    ++    DV+D
Sbjct: 7   TILI-TGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPE----IHTEVCDVAD 61

Query: 91  PSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYK---NTVEHAETVIRTNFYGAKLLTES 147
             S    V W K  +  L++L+NNAG+  N+      + ++ AE  I TN      LT  
Sbjct: 62  RDSRRELVEWLKKEYPNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTAL 121

Query: 148 LLPLFRRSPSKSRILNISSRLGTLSKVRNP 177
           LLP   R P ++ I+N+SS L  +     P
Sbjct: 122 LLPHLLRQP-EATIINVSSGLAFVPMASTP 150

Length = 245

>gnl|CDD|187624 cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol dehydrogenase-like, classical (c) SDRs

 Score = 99.8 bits (249), Expect = 8e-25
 Identities = 60/231 (25%), Positives = 95/231 (41%), Gaps = 50/231 (21%)

Query: 33  AIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVES-LSEKGLPVNFFQLDVSDP 91
           AI+TGA +GIG A+ +RLA  G  ++L   ++E   ++    +SE G        DV+D 
Sbjct: 5   AIITGAAQGIGRAIAERLAADGFNIVLADLNLEEAAKSTIQEISEAGYNAVAVGADVTDK 64

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGV----SFNDIYKNTVEHAETVIRTNFYGAKLLTES 147
             +EA +      F + D++VNNAG+        I   T E  + V   N +G     ++
Sbjct: 65  DDVEALIDQAVEKFGSFDVMVNNAGIAPITPLLTI---TEEDLKKVYAVNVFGVLFGIQA 121

Query: 148 LLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDG 207
               F++     +I+N SS  G                                      
Sbjct: 122 AARQFKKLGHGGKIINASSIAGV------------------------------------- 144

Query: 208 TWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSM 258
               QG+P +   Y+ SK A+   T   A+    +GI+VN+Y PG  +T M
Sbjct: 145 ----QGFPNL-GAYSASKFAVRGLTQTAAQELAPKGITVNAYAPGIVKTEM 190

2,3-butanediol dehydrogenases (BDHs) catalyze the NAD+ dependent conversion of 2,3-butanediol to acetonin; BDHs are classified into types according to their stereospecificity as to substrates and products. Included in this subgroup are Klebsiella pneumonia meso-BDH which catalyzes meso-2,3-butanediol to D(-)-acetonin, and Corynebacterium glutamicum L-BDH which catalyzes lX+)-2,3-butanediol to L(+)-acetonin. This subgroup is comprised of classical SDRs with the characteristic catalytic triad and NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|212493 cd08932, HetN_like_SDR_c, HetN oxidoreductase-like, classical (c) SDR

 Score = 98.6 bits (246), Expect = 1e-24
 Identities = 60/231 (25%), Positives = 88/231 (38%), Gaps = 48/231 (20%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           +A+VTGA++GIG  + + LA  G  V L  R+       + +LS  G  V     D  DP
Sbjct: 2   VALVTGASRGIGIEIARALARDGYRVSLGLRN----PEDLAALSASGGDVEAVPYDARDP 57

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLP 150
               A V   +  F  +D+LV+NAG+     + + +    E     N      LT +LLP
Sbjct: 58  EDARALVDALRDRFGRIDVLVHNAGIGRPTTLREGSDAELEAHFSINVIAPAELTRALLP 117

Query: 151 LFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWK 210
             R + S  R++ ++S  G      N                                  
Sbjct: 118 ALREAGS-GRVVFLNSLSGKRVLAGN---------------------------------- 142

Query: 211 SQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG 261
                     Y+ SK AL A    L +     G+ V++ CPGF  T M QG
Sbjct: 143 --------AGYSASKFALRALAHALRQEGWDHGVRVSAVCPGFVDTPMAQG 185

This subgroup includes Anabaena sp. strain PCC 7120 HetN, a putative oxidoreductase involved in heterocyst differentiation, and related proteins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 223

>gnl|CDD|187625 cd05367, SPR-like_SDR_c, sepiapterin reductase (SPR)-like, classical (c) SDRs

 Score = 98.9 bits (247), Expect = 1e-24
 Identities = 73/270 (27%), Positives = 105/270 (38%), Gaps = 56/270 (20%)

Query: 34  IVTGANKGIGFALVKRLAELGLT--VILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           I+TGA++GIG AL + L + G    V+L AR  E  Q   E L   GL V   + D+SD 
Sbjct: 3   ILTGASRGIGRALAEELLKRGSPSVVVLLARSEEPLQELKEELRP-GLRVTTVKADLSDA 61

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGV--SFNDIYKNTVEHAETVIRTNFYGAKLLTESLL 149
           + +E  +   +      D+L+NNAG     + I    ++  +     N      LT +LL
Sbjct: 62  AGVEQLLEAIRKLDGERDLLINNAGSLGPVSKIEFIDLDELQKYFDLNLTSPVCLTSTLL 121

Query: 150 PLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTW 209
             F++   K  ++N+SS         NP                  F G           
Sbjct: 122 RAFKKRGLKKTVVNVSSGAA-----VNP------------------FKG----------- 147

Query: 210 KSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTADE 269
                   W  Y  SK A + +  VLA   E   + V SY PG   T M +     +AD 
Sbjct: 148 --------WGLYCSSKAARDMFFRVLAA--EEPDVRVLSYAPGVVDTDMQREIRETSADP 197

Query: 270 AADVGARLL-----LLHPQQLPTAKFYIGL 294
                 R L     LL P+Q  +A+    L
Sbjct: 198 ETRSRFRSLKEKGELLDPEQ--SAEKLANL 225

Human SPR, a member of the SDR family, catalyzes the NADP-dependent reduction of sepiaptern to 7,8-dihydrobiopterin (BH2). In addition to SPRs, this subgroup also contains Bacillus cereus yueD, a benzil reductase, which catalyzes the stereospecific reduction of benzil to (S)-benzoin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 241

>gnl|CDD|187602 cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR

 Score = 98.9 bits (247), Expect = 2e-24
 Identities = 59/228 (25%), Positives = 87/228 (38%), Gaps = 50/228 (21%)

Query: 33  AIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPS 92
           A+VT A+ GIG A+ + LA  G  V + AR+ E  +RA   L   G  V     D++DP 
Sbjct: 4   ALVTAASSGIGLAIARALAREGARVAICARNRENLERAASELRAGGAGVLAVVADLTDPE 63

Query: 93  SIEAFVSWFKSNFAALDILVNNAG----VSFNDIYKNTVEHAETVIRTNFYGAKLLTESL 148
            I+  V      F  +DILVNNAG      F ++   T E               +  ++
Sbjct: 64  DIDRLVEKAGDAFGRVDILVNNAGGPPPGPFAEL---TDEDWLEAFDLKLLSVIRIVRAV 120

Query: 149 LPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGT 208
           LP  +      RI+NISS       V+ P                     L L +     
Sbjct: 121 LPGMKER-GWGRIVNISS-----LTVKEPE------------------PNLVLSN----- 151

Query: 209 WKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQT 256
                         V++  L      L++    +G++VNS  PG+  T
Sbjct: 152 --------------VARAGLIGLVKTLSRELAPDGVTVNSVLPGYIDT 185

This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|187590 cd05329, TR_SDR_c, tropinone reductase-I and II (TR-1, and TR-II)-like, classical (c) SDRs

 Score = 98.7 bits (246), Expect = 2e-24
 Identities = 68/242 (28%), Positives = 95/242 (39%), Gaps = 51/242 (21%)

Query: 25  KWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFF 84
           +W  +   A+VTG  KGIG+A+V+ LA LG  V   AR+ +     +    EKG  V   
Sbjct: 1   RWNLEGKTALVTGGTKGIGYAIVEELAGLGAEVYTCARNQKELDECLTEWREKGFKVEGS 60

Query: 85  QLDVSDPSSIEAFVSWFKSNF-AALDILVNNAGVSFNDIYKN----TVEHAETVIRTNFY 139
             DVS  S  +  +    S+F   L+ILVNNAG +   I K     T E    ++ TNF 
Sbjct: 61  VCDVSSRSERQELMDTVASHFGGKLNILVNNAGTN---IRKEAKDYTEEDYSLIMSTNFE 117

Query: 140 GAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGL 199
            A  L+    PL + S     I+ ISS  G                              
Sbjct: 118 AAYHLSRLAHPLLKAS-GNGNIVFISSVAG------------------------------ 146

Query: 200 FLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMT 259
            + +V  G             Y  +K ALN  T  LA  +  + I VN+  P    T + 
Sbjct: 147 -VIAVPSG-----------APYGATKGALNQLTRSLACEWAKDNIRVNAVAPWVIATPLV 194

Query: 260 QG 261
           + 
Sbjct: 195 EP 196

This subgroup includes TR-I and TR-II; these proteins are members of the SDR family. TRs catalyze the NADPH-dependent reductions of the 3-carbonyl group of tropinone, to a beta-hydroxyl group. TR-I and TR-II produce different stereoisomers from tropinone, TR-I produces tropine (3alpha-hydroxytropane), and TR-II, produces pseudotropine (sigma-tropine, 3beta-hydroxytropane). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 251

>gnl|CDD|237188 PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 98.5 bits (246), Expect = 3e-24
 Identities = 62/239 (25%), Positives = 95/239 (39%), Gaps = 51/239 (21%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTA-RDVERGQRAVESLSEKGLPVNFFQLDVSD 90
           +A+VTG  +GIG  + + LA  G  + +    D E      + L   G+ V FF  DV+D
Sbjct: 4   VALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVAD 63

Query: 91  PSSIEAFVSWFKSNFAALDILVNNAGVSF---NDIYKNTVEHAETVIRTNFYGAKLLTES 147
            S+ EA +   ++ +  +D LVNNAGV      D+   T E  + V+  N  G   LT++
Sbjct: 64  LSAHEAMLDAAQAAWGRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQA 123

Query: 148 ----LLPLFRRSPSKSR-ILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQ 202
               +L          R I+ +SS            + +I+    +S     R       
Sbjct: 124 VAKRMLAQPEPEELPHRSIVFVSS------------VNAIM----VS---PNR------- 157

Query: 203 SVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG 261
                            +Y +SK  L+    + A R   EGI V    PG  +T MT  
Sbjct: 158 ----------------GEYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAP 200

Length = 256

>gnl|CDD|212495 cd09807, retinol-DH_like_SDR_c, retinol dehydrogenases (retinol-DHs), classical (c) SDRs

 Score = 98.3 bits (245), Expect = 5e-24
 Identities = 73/236 (30%), Positives = 103/236 (43%), Gaps = 34/236 (14%)

Query: 34  IVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFF--QLDVSDP 91
           I+TGAN GIG    + LA  G  VI+  RD+ + + A   +    L        LD++  
Sbjct: 5   IITGANTGIGKETARELARRGARVIMACRDMAKCEEAAAEIRRDTLNHEVIVRHLDLASL 64

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPL 151
            SI AF + F +    LD+L+NNAGV     Y  T +  E     N  G  LLT  LL L
Sbjct: 65  KSIRAFAAEFLAEEDRLDVLINNAGV-MRCPYSKTEDGFEMQFGVNHLGHFLLTNLLLDL 123

Query: 152 FRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKS 211
            ++S + SRI+N+SS      K        I  D+  SE+                    
Sbjct: 124 LKKS-APSRIVNVSSLAHKAGK--------INFDDLNSEKSYNTGFA------------- 161

Query: 212 QGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTA 267
                    Y  SKLA   +T  LA+R +G G++VN+  PG  +T + +  G H  
Sbjct: 162 ---------YCQSKLANVLFTRELARRLQGTGVTVNALHPGVVRTELGRHTGIHHL 208

Classical SDR-like subgroup containing retinol-DHs and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 274

>gnl|CDD|187617 cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_coenzyme A_reductase (ChcA)_like, classical (c) SDRs

 Score = 97.0 bits (242), Expect = 7e-24
 Identities = 57/230 (24%), Positives = 80/230 (34%), Gaps = 45/230 (19%)

Query: 33  AIVTGANKGIGFALVKRLAELGLTVILT-ARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           A+VTG ++GIG A+  RLAE G  V++   +  +        + E G      + DVS P
Sbjct: 1   ALVTGGSRGIGKAIALRLAERGADVVINYRKSKDAAAEVAAEIEELGGKAVVVRADVSQP 60

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVS-FNDIYKNTVEHAETVIRTNFYGAKLLTESLLP 150
             +E   +  K  F  LD+LV+NA    F  + + T  H +  + TN        +    
Sbjct: 61  QDVEEMFAAVKERFGRLDVLVSNAAAGAFRPLSELTPAHWDAKMNTNLKALVHCAQQAAK 120

Query: 151 LFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWK 210
           L R      RI+ ISS     S    PN                                
Sbjct: 121 LMRER-GGGRIVAISS---LGSIRALPN-------------------------------- 144

Query: 211 SQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ 260
                  +     +K AL A    LA      GI VN+  PG   T    
Sbjct: 145 -------YLAVGTAKAALEALVRYLAVELGPRGIRVNAVSPGVIDTDALA 187

This subgroup contains classical SDR proteins, including members identified as 1-cyclohexenylcarbonyl coenzyme A reductase. ChcA of Streptomyces collinus is implicated in the final reduction step of shikimic acid to ansatrienin. ChcA shows sequence similarity to the SDR family of NAD-binding proteins, but it lacks the conserved Tyr of the characteristic catalytic site. This subgroup also contains the NADH-dependent enoyl-[acyl-carrier-protein(ACP)] reductase FabL from Bacillus subtilis. This enzyme participates in bacterial fatty acid synthesis, in type II fatty-acid synthases and catalyzes the last step in each elongation cycle. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|131468 TIGR02415, 23BDH, acetoin reductases

 Score = 96.4 bits (240), Expect = 1e-23
 Identities = 58/240 (24%), Positives = 99/240 (41%), Gaps = 43/240 (17%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           +A+VTG  +GIG  + +RLA+ G  V +   + E  +   + +++ G     ++LDVSD 
Sbjct: 2   VALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDK 61

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSF-NDIYKNTVEHAETVIRTNFYGAKLLTESLLP 150
             + + +      F   D++VNNAGV+    I + T E  + V   N  G     ++   
Sbjct: 62  DQVFSAIDQAAEKFGGFDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAAR 121

Query: 151 LFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWK 210
            F++     +I+N +S  G      NP                         S       
Sbjct: 122 QFKKQGHGGKIINAASIAGHEG---NPI-----------------------LSA------ 149

Query: 211 SQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTADEA 270
                     Y+ +K A+   T   A+    +GI+VN+YCPG  +T M +     T++ A
Sbjct: 150 ----------YSSTKFAVRGLTQTAAQELAPKGITVNAYCPGIVKTPMWEEIDEETSEIA 199

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PMID:11577733) [Energy metabolism, Fermentation]. Length = 254

>gnl|CDD|235725 PRK06179, PRK06179, short chain dehydrogenase; Provisional

 Score = 96.5 bits (241), Expect = 2e-23
 Identities = 51/145 (35%), Positives = 77/145 (53%), Gaps = 10/145 (6%)

Query: 28  SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLD 87
           S   +A+VTGA+ GIG A  ++LA  G  V  T+R+  R       +      V   +LD
Sbjct: 2   SNSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAA----PIP----GVELLELD 53

Query: 88  VSDPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNT-VEHAETVIRTNFYGAKLLTE 146
           V+D +S++A V    +    +D+LVNNAGV      + + +  A+ +  TN +G   +T 
Sbjct: 54  VTDDASVQAAVDEVIARAGRIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTR 113

Query: 147 SLLPLFRRSPSKSRILNISSRLGTL 171
           ++LP  R   S  RI+NISS LG L
Sbjct: 114 AVLPHMRAQGS-GRIINISSVLGFL 137

Length = 270

>gnl|CDD|226674 COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

 Score = 96.2 bits (240), Expect = 2e-23
 Identities = 50/145 (34%), Positives = 78/145 (53%), Gaps = 10/145 (6%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQR-AVESLSEKGLPVNFFQLDVSD 90
           +A++TGA+ GIG A  + LAE G  V+L AR  ER +  A E  +   L +    LDV+D
Sbjct: 8   VALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALAL---ALDVTD 64

Query: 91  PSSIEAFVSWFKSNFAALDILVNNAGVSFND-IYKNTVEHAETVIRTNFYGAKLLTESLL 149
            +++EA +      F  +DILVNNAG++  D + +  ++  + +I TN  G    T ++L
Sbjct: 65  RAAVEAAIEALPEEFGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVL 124

Query: 150 PLF--RRSPSKSRILNISSRLGTLS 172
           P    R+S     I+N+ S  G   
Sbjct: 125 PGMVERKSGH---IINLGSIAGRYP 146

Length = 246

>gnl|CDD|187649 cd08945, PKR_SDR_c, Polyketide ketoreductase, classical (c) SDR

 Score = 96.1 bits (239), Expect = 2e-23
 Identities = 68/239 (28%), Positives = 95/239 (39%), Gaps = 44/239 (18%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           +A+VTGA  GIG A+ +RL + GL V + AR  E     V+ L E G+  +    DV   
Sbjct: 5   VALVTGATSGIGLAIARRLGKEGLRVFVCARGEEGLATTVKELREAGVEADGRTCDVRSV 64

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVS-FNDIYKNTVEHAETVIRTNFYGAKLLTESLLP 150
             IEA V+   + +  +D+LVNNAG S      +   E    V+ TN  G   +T+ +L 
Sbjct: 65  PEIEALVAAAVARYGPIDVLVNNAGRSGGGATAELADELWLDVVETNLTGVFRVTKEVLK 124

Query: 151 L-FRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTW 209
                     RI+NI+S  G                                Q V     
Sbjct: 125 AGGMLERGTGRIINIASTGGK-------------------------------QGVVHA-- 151

Query: 210 KSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTAD 268
                      Y+ SK  +  +T  L       GI+VN+ CPGF +T M      H AD
Sbjct: 152 ---------APYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYAD 201

Polyketide ketoreductase (KR) is a classical SDR with a characteristic NAD-binding pattern and active site tetrad. Aromatic polyketides include various aromatic compounds of pharmaceutical interest. Polyketide KR, part of the type II polyketide synthase (PKS) complex, is comprised of stand-alone domains that resemble the domains found in fatty acid synthase and multidomain type I PKS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 258

>gnl|CDD|187600 cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score = 95.5 bits (238), Expect = 3e-23
 Identities = 67/233 (28%), Positives = 92/233 (39%), Gaps = 49/233 (21%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           +AIVTG  +G+G A  + L   G  V+L+    E GQ A   L +      FF LDV+D 
Sbjct: 7   VAIVTGGARGLGLAHARLLVAEGAKVVLSDILDEEGQAAAAELGDA---ARFFHLDVTDE 63

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLP 150
               A V   +  F  LD+LVNNAG+     +   T+E    ++  N  G  L T +++P
Sbjct: 64  DGWTAVVDTAREAFGRLDVLVNNAGILTGGTVETTTLEEWRRLLDINLTGVFLGTRAVIP 123

Query: 151 LFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWK 210
             + +   S I+N+SS                          IE  VG            
Sbjct: 124 PMKEAGGGS-IINMSS--------------------------IEGLVGD----------- 145

Query: 211 SQGWPEIWTDYAVSKLALNAYTMVLAK--RYEGEGISVNSYCPGFTQTSMTQG 261
                     Y  SK A+   T   A     +G GI VNS  PG+  T MT  
Sbjct: 146 -----PALAAYNASKGAVRGLTKSAALECATQGYGIRVNSVHPGYIYTPMTDE 193

This subgroup includes members identified as 3beta17beta hydroxysteroid dehydrogenase, 20beta hydroxysteroid dehydrogenase, and R-alcohol dehydrogenase. These proteins exhibit the canonical active site tetrad and glycine rich NAD(P)-binding motif of the classical SDRs. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 247

>gnl|CDD|235975 PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 95.7 bits (239), Expect = 3e-23
 Identities = 58/232 (25%), Positives = 90/232 (38%), Gaps = 48/232 (20%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           +AIVTGA+ GIG  + +R A  G  V++T R+ E  +R    +   G        DVSD 
Sbjct: 7   VAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGG-RAIAVAADVSDE 65

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVS--FNDIYKNTVEHAETVIRTNFYGAKLLTESLL 149
           + +EA V+     F ++DILVNNAG +     +        + +   N     L T++ +
Sbjct: 66  ADVEAAVAAALERFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAV 125

Query: 150 PLFRRSPSKSRILNISSRLGTLSKVR-NPNIKSILEDEELSEEQIERFVGLFLQSVKDGT 208
           P  R       I+N++S  G    +R  P +                             
Sbjct: 126 PAMRGE-GGGAIVNVASTAG----LRPRPGL----------------------------G 152

Query: 209 WKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ 260
           W           Y  SK A+   T  LA     + I VN+  P   +T + +
Sbjct: 153 W-----------YNASKGAVITLTKALAAELGPDKIRVNAVAPVVVETGLLE 193

Length = 251

>gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase

 Score = 93.0 bits (232), Expect = 3e-23
 Identities = 38/140 (27%), Positives = 58/140 (41%), Gaps = 11/140 (7%)

Query: 32  IAIVTGANKGIGFALVKRLAELG-LTVILTAR--DVERGQRAVESLSEKGLPVNFFQLDV 88
             ++TG   G+G AL + LA  G   ++L +R          V  L   G  V     DV
Sbjct: 2   TVLITGGTGGLGLALARWLAAEGARHLVLVSRRGPAPGAAELVAELEALGAEVTVAACDV 61

Query: 89  SDPSSIEAFVSWFKSNFAALDILVNNAGVSFND--IYKNTVEHAETVIRTNFYGAKLLTE 146
           +D  ++ A ++   +    LD +V+NAGV  +D  + + T E  E V+     GA  L E
Sbjct: 62  ADRDALAALLAALPAALGPLDGVVHNAGVL-DDGPLEELTPERFERVLAPKVTGAWNLHE 120

Query: 147 SLLPLFRRSPSKSRILNISS 166
               L          +  SS
Sbjct: 121 LTRDL-----DLGAFVLFSS 135

This family contains a wide variety of dehydrogenases. Length = 167

>gnl|CDD|187616 cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (GlcDH), classical (c) SDRs

 Score = 93.6 bits (233), Expect = 2e-22
 Identities = 68/230 (29%), Positives = 94/230 (40%), Gaps = 50/230 (21%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTAR-DVERGQRAVESLSEKGLPVNFFQLDVSD 90
           +A+VTGA+ GIG A+  RLA  G  V++  R   +  +  VE +   G      Q DVS 
Sbjct: 5   VALVTGASSGIGKAIAIRLATAGANVVVNYRSKEDAAEEVVEEIKAVGGKAIAVQADVSK 64

Query: 91  PSSIEAFVSWFKSNFAALDILVNNAGV----SFNDIYKNTVEHAETVIRTNFYGAKLLTE 146
              + A        F  LDILVNNAG+    S +++   T+E    VI  N  G  L   
Sbjct: 65  EEDVVALFQSAIKEFGTLDILVNNAGLQGDASSHEM---TLEDWNKVIDVNLTGQFLCAR 121

Query: 147 SLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKD 206
             +  FR+S  K +I+N+SS                        E+I             
Sbjct: 122 EAIKRFRKSKIKGKIINMSS----------------------VHEKIP------------ 147

Query: 207 GTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQT 256
                  WP    +YA SK  +   T  LA+ Y  +GI VN+  PG   T
Sbjct: 148 -------WP-GHVNYAASKGGVKMMTKTLAQEYAPKGIRVNAIAPGAINT 189

GlcDH, is a tetrameric member of the SDR family, it catalyzes the NAD(P)-dependent oxidation of beta-D-glucose to D-glucono-delta-lactone. GlcDH has a typical NAD-binding site glycine-rich pattern as well as the canonical active site tetrad (YXXXK motif plus upstream Ser and Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|187604 cd05346, SDR_c5, classical (c) SDR, subgroup 5

 Score = 93.1 bits (232), Expect = 2e-22
 Identities = 53/143 (37%), Positives = 77/143 (53%), Gaps = 4/143 (2%)

Query: 31  TIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEK-GLPVNFFQLDVS 89
              ++TGA+ GIG A  +R A+ G  +ILT R  ER Q   + L  K  + V   QLDVS
Sbjct: 1   KTVLITGASSGIGEATARRFAKAGAKLILTGRRAERLQELADELGAKFPVKVLPLQLDVS 60

Query: 90  DPSSIEAFVSWFKSNFAALDILVNNAGVSF--NDIYKNTVEHAETVIRTNFYGAKLLTES 147
           D  SIEA +      F  +DILVNNAG++   +   +  +E  ET+I TN  G   +T  
Sbjct: 61  DRESIEAALENLPEEFRDIDILVNNAGLALGLDPAQEADLEDWETMIDTNVKGLLNVTRL 120

Query: 148 LLPLFRRSPSKSRILNISSRLGT 170
           +LP+   + ++  I+N+ S  G 
Sbjct: 121 ILPIM-IARNQGHIINLGSIAGR 142

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|187622 cd05364, SDR_c11, classical (c) SDR, subgroup 11

 Score = 93.2 bits (232), Expect = 2e-22
 Identities = 58/239 (24%), Positives = 91/239 (38%), Gaps = 48/239 (20%)

Query: 29  KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLP---VNFFQ 85
              +AI+TG++ GIG       A LG  + LT RD ER +   +S  + G+    +    
Sbjct: 2   SGKVAIITGSSSGIGAGTAILFARLGARLALTGRDAERLEETRQSCLQAGVSEKKILLVV 61

Query: 86  LDVSDPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNT-VEHAETVIRTNFYGAKLL 144
            D+++    +  +S   + F  LDILVNNAG+      ++  +E  + V+  N      L
Sbjct: 62  ADLTEEEGQDRIISTTLAKFGRLDILVNNAGILAKGGGEDQDIEEYDKVMNLNLRAVIYL 121

Query: 145 TESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSV 204
           T+  +P      +K  I+N+SS  G  S                                
Sbjct: 122 TKLAVPHL--IKTKGEIVNVSSVAGGRSFPGVLY-------------------------- 153

Query: 205 KDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQG 263
                           Y +SK AL+ +T   A     +G+ VNS  PG   T   +  G
Sbjct: 154 ----------------YCISKAALDQFTRCTALELAPKGVRVNSVSPGVIVTGFHRRMG 196

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 253

>gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional

 Score = 96.9 bits (242), Expect = 2e-22
 Identities = 71/276 (25%), Positives = 117/276 (42%), Gaps = 78/276 (28%)

Query: 34  IVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSS 93
           ++TGA+ GIG A   ++AE G TV L AR+ E     V  +  KG   + +  D++D ++
Sbjct: 375 LITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAA 434

Query: 94  IEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHA-------ETVIRTNFYGAKLLTE 146
           ++  V    +    +D LVNNAG S     + +VE++       E  +  N++GA  L  
Sbjct: 435 VDHTVKDILAEHGHVDYLVNNAGRSI----RRSVENSTDRFHDYERTMAVNYFGAVRLIL 490

Query: 147 SLLP--LFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSV 204
            LLP    RR      ++N+SS +G  +    P                 RF        
Sbjct: 491 GLLPHMRERR---FGHVVNVSS-IGVQT--NAP-----------------RF-------- 519

Query: 205 KDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFT-------QTS 257
                         + Y  SK AL+A++ V A     +GI+       FT       +T 
Sbjct: 520 --------------SAYVASKAALDAFSDVAASETLSDGIT-------FTTIHMPLVRTP 558

Query: 258 M---TQGQGSH---TADEAADVGARLLLLHPQQLPT 287
           M   T+   +    + +EAAD+  R ++  P+++ T
Sbjct: 559 MIAPTKRYNNVPTISPEEAADMVVRAIVEKPKRIDT 594

Length = 657

>gnl|CDD|237100 PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenase; Provisional

 Score = 93.4 bits (233), Expect = 2e-22
 Identities = 61/235 (25%), Positives = 97/235 (41%), Gaps = 44/235 (18%)

Query: 29  KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDV 88
           K  +A+VTGA  GIG  +   LA+ G  V++   + E    A E+L + G       +DV
Sbjct: 3   KGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDV 62

Query: 89  SDPSSIEAFVSWFKSNFAALDILVNNAGVSF-NDIYKNTVEHAETVIRTNFYGAKLLTES 147
           +D  +I A + +    F  +DILVNNAG+     I     E  + +I     GA L T++
Sbjct: 63  TDEEAINAGIDYAVETFGGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKA 122

Query: 148 LLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDG 207
            LP+ +      RI+N++S                          +   VG   ++    
Sbjct: 123 ALPIMKAQGG-GRIINMAS--------------------------VHGLVGSAGKAA--- 152

Query: 208 TWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ 262
                        Y  +K  L   T V+A      G++VN+ CPG+  T + + Q
Sbjct: 153 -------------YVSAKHGLIGLTKVVALEGATHGVTVNAICPGYVDTPLVRKQ 194

Length = 258

>gnl|CDD|180984 PRK07454, PRK07454, short chain dehydrogenase; Provisional

 Score = 92.7 bits (231), Expect = 2e-22
 Identities = 63/271 (23%), Positives = 102/271 (37%), Gaps = 70/271 (25%)

Query: 33  AIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPS 92
           A++TGA+ GIG A     A+ G  + L AR  +  +     L   G+    + +D+S+P 
Sbjct: 9   ALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPE 68

Query: 93  SIEAFVSWFKSNFAALDILVNNAGVSF-NDIYKNTVEHAETVIRTNFYGAKLLTESLLPL 151
           +I   ++     F   D+L+NNAG+++   + +  +   + VI+ N         ++LP 
Sbjct: 69  AIAPGIAELLEQFGCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPG 128

Query: 152 FRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKS 211
            R       I+N+SS        RN                       F Q         
Sbjct: 129 MRAR-GGGLIINVSSIAA-----RNA----------------------FPQ--------- 151

Query: 212 QGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPG---------------FTQT 256
                 W  Y VSK AL A+T  LA+     GI V +   G               F ++
Sbjct: 152 ------WGAYCVSKAALAAFTKCLAEEERSHGIRVCTITLGAVNTPLWDTETVQADFDRS 205

Query: 257 SMTQGQGSHTADEAADVGARLLLLHPQQLPT 287
           +M       + ++ A       +LH  QLP 
Sbjct: 206 AML------SPEQVAQ-----TILHLAQLPP 225

Length = 241

>gnl|CDD|187584 cd05323, ADH_SDR_c_like, insect type alcohol dehydrogenase (ADH)-like, classical (c) SDRs

 Score = 92.7 bits (231), Expect = 3e-22
 Identities = 59/234 (25%), Positives = 77/234 (32%), Gaps = 52/234 (22%)

Query: 33  AIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVN--FFQLDVSD 90
           AI+TG   GIG A  K L + G  V +  R+   G  A   L      V   F Q DV+ 
Sbjct: 3   AIITGGASGIGLATAKLLLKKGAKVAILDRNENPG--AAAELQAINPKVKATFVQCDVTS 60

Query: 91  PSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNT---VEHAETVIRTNFYGAKLLTES 147
              + A        F  +DIL+NNAG+     Y          E  I  N  G    T  
Sbjct: 61  WEQLAAAFKKAIEKFGRVDILINNAGILDEKSYLFAGKLPPPWEKTIDVNLTGVINTTYL 120

Query: 148 LLPLFRRSPSKS--RILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVK 205
            L    ++       I+NI S  G                                  V 
Sbjct: 121 ALHYMDKNKGGKGGVIVNIGSVAG--------------------------LYPAPQFPV- 153

Query: 206 DGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYE-GEGISVNSYCPGFTQTSM 258
                          Y+ SK  +  +T  LA   E   G+ VN+ CPGFT T +
Sbjct: 154 ---------------YSASKHGVVGFTRSLADLLEYKTGVRVNAICPGFTNTPL 192

This subgroup contains insect type ADH, and 15-hydroxyprostaglandin dehydrogenase (15-PGDH) type I; these proteins are classical SDRs. ADH catalyzes the NAD+-dependent oxidation of alcohols to aldehydes/ketones. This subgroup is distinct from the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase/reductase family, and evolved in fruit flies to allow the digestion of fermenting fruit. 15-PGDH catalyzes the NAD-dependent interconversion of (5Z,13E)-(15S)-11alpha,15-dihydroxy-9-oxoprost-13-enoate and (5Z,13E)-11alpha-hydroxy-9,15-dioxoprost-13-enoate, and has a typical SDR glycine-rich NAD-binding motif, which is not fully present in ADH. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|187597 cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) and human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 92.5 bits (230), Expect = 4e-22
 Identities = 65/260 (25%), Positives = 100/260 (38%), Gaps = 64/260 (24%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARD---------------VERGQRAVESLSE 76
           +A VTGA++GIG A+  RLA+ G TV++ A+                +E     +E+   
Sbjct: 5   VAFVTGASRGIGRAIALRLAKAGATVVVAAKTASEGDNGSAKSLPGTIEETAEEIEAAGG 64

Query: 77  KGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNT-VEHAETVIR 135
           + LP+    +DV D   + A V      F  LDILVNNAG  +  + ++T  +  + + R
Sbjct: 65  QALPI---VVDVRDEDQVRALVEATVDQFGRLDILVNNAGAIWLSLVEDTPAKRFDLMQR 121

Query: 136 TNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIER 195
            N  G  LL+++ LP   ++  +  ILNIS  L        P                  
Sbjct: 122 VNLRGTYLLSQAALPHMVKAG-QGHILNISPPLSL-----RP------------------ 157

Query: 196 FVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQ 255
                               +    YA  K  ++  T+ LA      GI+VNS  P    
Sbjct: 158 -----------------ARGD--VAYAAGKAGMSRLTLGLAAELRRHGIAVNSLWPSTAI 198

Query: 256 TS--MTQGQGSHTADEAADV 273
            +   T+  G      A   
Sbjct: 199 ETPAATELSGGSDPARARSP 218

This subgroup includes human DHRS1 and human HSDL2 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|211705 TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase

 Score = 91.7 bits (228), Expect = 8e-22
 Identities = 69/265 (26%), Positives = 103/265 (38%), Gaps = 55/265 (20%)

Query: 33  AIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPS 92
           A+VTGA  GIG A+ + LA  G  V++     E  + A +   + G  V +   DV+   
Sbjct: 4   ALVTGAASGIGLAIARALAAAGANVVVNDFGEEGAEAAAKVAGDAGGSVIYLPADVTKED 63

Query: 93  SIEAFVSWFKSNFAALDILVNNAGVSF-NDIYKNTVEHAETVIRTNFYGAKLLTESLLPL 151
            I   ++   + F  LDILVNNAG+     I +   E  + +I      A     + LP 
Sbjct: 64  EIADMIAAAAAEFGGLDILVNNAGIQHVAPIEEFPPEDWDRIIAVMLTSAFHTIRAALPH 123

Query: 152 FRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKS 211
            ++     RI+NI+S                              V    +S        
Sbjct: 124 MKKQ-GWGRIINIAS--------------------------AHGLVASPFKSA------- 149

Query: 212 QGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTADEAA 271
                    Y  +K  L   T VLA      GI+VN+ CPG+ +T + + Q    AD+A 
Sbjct: 150 ---------YVAAKHGLIGLTKVLALEVAEHGITVNAICPGYVRTPLVEKQ---IADQAK 197

Query: 272 DVG------ARLLLLHPQQLPTAKF 290
             G       R ++L  Q  PT +F
Sbjct: 198 TRGIPEEQVIREVMLKGQ--PTKRF 220

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. Length = 255

>gnl|CDD|187634 cd08929, SDR_c4, classical (c) SDR, subgroup 4

 Score = 91.0 bits (226), Expect = 8e-22
 Identities = 48/147 (32%), Positives = 65/147 (44%), Gaps = 12/147 (8%)

Query: 33  AIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPS 92
           A+VTGA++GIG A  + L   G  V + ARD  R   A     E  L +     DV D +
Sbjct: 3   ALVTGASRGIGEATARLLHAEGYRVGICARDEARLAAAAAQELEGVLGL---AGDVRDEA 59

Query: 93  SIEAFVSWFKSNFAALDILVNNAGVS-FNDIYKNTVEHAETVIRTNFYGAKLLT-ESLLP 150
            +   V   +  F  LD LVNNAGV     + + T E    V+ TN  GA     ++   
Sbjct: 60  DVRRAVDAMEEAFGGLDALVNNAGVGVMKPVEELTPEEWRLVLDTNLTGAFYCIHKAAPA 119

Query: 151 LFRRSPSKSRILNISSRLGTLSKVRNP 177
           L RR      I+N+ S  G     +N 
Sbjct: 120 LLRR--GGGTIVNVGSLAG-----KNA 139

This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 226

>gnl|CDD|181518 PRK08643, PRK08643, acetoin reductase; Validated

 Score = 91.7 bits (228), Expect = 9e-22
 Identities = 66/243 (27%), Positives = 98/243 (40%), Gaps = 49/243 (20%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           +A+VTGA +GIGFA+ KRL E G  V +   + E  Q A + LS+ G      + DVSD 
Sbjct: 4   VALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDR 63

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVS----FNDIYKNTVEHAETVIRTNFYGAKLLTES 147
             + A V      F  L+++VNNAGV+       I   T E  + V   N  G     ++
Sbjct: 64  DQVFAAVRQVVDTFGDLNVVVNNAGVAPTTPIETI---TEEQFDKVYNINVGGVIWGIQA 120

Query: 148 LLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDG 207
               F++     +I+N +S+ G    V NP +                            
Sbjct: 121 AQEAFKKLGHGGKIINATSQAGV---VGNPEL---------------------------- 149

Query: 208 TWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTA 267
                        Y+ +K A+   T   A+    EGI+VN+Y PG  +T M         
Sbjct: 150 -----------AVYSSTKFAVRGLTQTAARDLASEGITVNAYAPGIVKTPMMFDIAHQVG 198

Query: 268 DEA 270
           + A
Sbjct: 199 ENA 201

Length = 256

>gnl|CDD|187610 cd05352, MDH-like_SDR_c, mannitol dehydrogenase (MDH)-like, classical (c) SDRs

 Score = 91.6 bits (228), Expect = 9e-22
 Identities = 67/285 (23%), Positives = 104/285 (36%), Gaps = 60/285 (21%)

Query: 29  KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEK-GLPVNFFQLD 87
           K  +AIVTG ++GIG A+ + LAE G  V +      R +   E L++K G+    ++ D
Sbjct: 7   KGKVAIVTGGSRGIGLAIARALAEAGADVAIIYNSAPRAEEKAEELAKKYGVKTKAYKCD 66

Query: 88  VSDPSSIEAFVSWFKSNFAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTE 146
           VS   S+E      + +F  +DIL+ NAG++ +      T E    VI  N  G     +
Sbjct: 67  VSSQESVEKTFKQIQKDFGKIDILIANAGITVHKPALDYTYEQWNKVIDVNLNGVFNCAQ 126

Query: 147 SLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKD 206
           +   +F++    S I+  +S  GT+      N                            
Sbjct: 127 AAAKIFKKQGKGSLII-TASMSGTI-----VN---------------------------- 152

Query: 207 GTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHT 266
                   P+    Y  SK A+      LA  +    I VNS  PG+  T +T       
Sbjct: 153 -------RPQPQAAYNASKAAVIHLAKSLAVEWAKYFIRVNSISPGYIDTDLTDFVDKEL 205

Query: 267 ADEAAD-------------VGARLLLLHPQQLPTAKFYIGLDPFV 298
             +                VGA L L        + +  G D  +
Sbjct: 206 RKKWESYIPLKRIALPEELVGAYLYLAS----DASSYTTGSDLII 246

NADP-mannitol dehydrogenase catalyzes the conversion of fructose to mannitol, an acyclic 6-carbon sugar. MDH is a tetrameric member of the SDR family. This subgroup also includes various other tetrameric SDRs, including Pichia stipitis D-arabinitol dehydrogenase (aka polyol dehydrogenase), Candida albicans Sou1p, a sorbose reductase, and Candida parapsilosis (S)-specific carbonyl reductase (SCR, aka S-specific alcohol dehydrogenase) which catalyzes the enantioselective reduction of 2-hydroxyacetophenone into (S)-1-phenyl-1,2-ethanediol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 252

>gnl|CDD|236074 PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 90.5 bits (225), Expect = 1e-21
 Identities = 48/143 (33%), Positives = 72/143 (50%), Gaps = 4/143 (2%)

Query: 29  KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDV 88
           +   A++TGA +GIG A+   LA+ G+ V L AR  E  +   E +   G+ V     DV
Sbjct: 6   QGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADV 65

Query: 89  SDPSSIEAFVSWFKSNFAALDILVNNAGVS-FNDIYKNTVEHAETVIRTNFYGAKLLTES 147
           SD   + A +   K+   ++DIL+NNAG+S F    +      E +I+ N  G    T +
Sbjct: 66  SDYEEVTAAIEQLKNELGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRA 125

Query: 148 LLP-LFRRSPSKSRILNISSRLG 169
           +LP +  R      I+NISS  G
Sbjct: 126 VLPSMIER--QSGDIINISSTAG 146

Length = 239

>gnl|CDD|235726 PRK06181, PRK06181, short chain dehydrogenase; Provisional

 Score = 90.8 bits (226), Expect = 2e-21
 Identities = 67/229 (29%), Positives = 102/229 (44%), Gaps = 50/229 (21%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           + I+TGA++GIG AL  RLA  G  ++L AR+  R     + L++ G        DVSD 
Sbjct: 3   VVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDA 62

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVS----FNDIYKNTVEHAETVIRTNFYGAKLLTES 147
            + E  +    + F  +DILVNNAG++    F+++   +V   E V+R N+ GA   T +
Sbjct: 63  EACERLIEAAVARFGGIDILVNNAGITMWSRFDELTDLSV--FERVMRVNYLGAVYCTHA 120

Query: 148 LLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDG 207
            LP  +   S+ +I+ +SS L  L+ V  P                 R            
Sbjct: 121 ALPHLKA--SRGQIVVVSS-LAGLTGV--PT----------------R------------ 147

Query: 208 TWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQT 256
                      + YA SK AL+ +   L      +G++V   CPGF  T
Sbjct: 148 -----------SGYAASKHALHGFFDSLRIELADDGVAVTVVCPGFVAT 185

Length = 263

>gnl|CDD|180448 PRK06182, PRK06182, short chain dehydrogenase; Validated

 Score = 90.4 bits (225), Expect = 3e-21
 Identities = 55/140 (39%), Positives = 79/140 (56%), Gaps = 8/140 (5%)

Query: 28  SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLD 87
            ++ +A+VTGA+ GIG A  +RLA  G TV   AR V++    +E L+  G  V+   LD
Sbjct: 1   MQKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDK----MEDLASLG--VHPLSLD 54

Query: 88  VSDPSSIEAFVSWFKSNFAALDILVNNAGV-SFNDIYKNTVEHAETVIRTNFYGAKLLTE 146
           V+D +SI+A V    +    +D+LVNNAG  S+  I    ++ A      N +GA  LT+
Sbjct: 55  VTDEASIKAAVDTIIAEEGRIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQ 114

Query: 147 SLLPLFRRSPSKSRILNISS 166
            +LP  R   S  RI+NISS
Sbjct: 115 LVLPHMRAQRS-GRIINISS 133

Length = 273

>gnl|CDD|171821 PRK12937, PRK12937, short chain dehydrogenase; Provisional

 Score = 89.8 bits (223), Expect = 3e-21
 Identities = 67/260 (25%), Positives = 103/260 (39%), Gaps = 48/260 (18%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILT-ARDVERGQRAVESLSEKGLPVNFFQLDVSD 90
           +AIVTGA++GIG A+ +RLA  G  V +  A         V  +   G      Q DV+D
Sbjct: 7   VAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVAD 66

Query: 91  PSSIEAFVSWFKSNFAALDILVNNAGV-SFNDIYKNTVEHAETVIRTNFYGAKLLTESLL 149
            +++       ++ F  +D+LVNNAGV     I    +E  +  I TN  GA ++     
Sbjct: 67  AAAVTRLFDAAETAFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAA 126

Query: 150 PLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTW 209
               +     RI+N+S+     S +  P                                
Sbjct: 127 RHLGQG---GRIINLST-----SVIALP-------------------------------- 146

Query: 210 KSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSM-TQGQGSHTAD 268
                P  +  YA SK A+     VLA    G GI+VN+  PG   T +   G+ +   D
Sbjct: 147 ----LPG-YGPYAASKAAVEGLVHVLANELRGRGITVNAVAPGPVATELFFNGKSAEQID 201

Query: 269 EAADVGARLLLLHPQQLPTA 288
           + A +     L  P+++  A
Sbjct: 202 QLAGLAPLERLGTPEEIAAA 221

Length = 245

>gnl|CDD|187648 cd08944, SDR_c12, classical (c) SDR, subgroup 12

 Score = 89.9 bits (223), Expect = 3e-21
 Identities = 64/257 (24%), Positives = 85/257 (33%), Gaps = 53/257 (20%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           +AIVTGA  GIG A   RLA  G  V++   D    Q  V  ++   L +   ++DV+D 
Sbjct: 5   VAIVTGAGAGIGAACAARLAREGARVVVADIDGGAAQAVVAQIAGGALAL---RVDVTDE 61

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSF--NDIYKNTVEHAETVIRTNFYGAKLLTESLL 149
             + A        F  LD+LVNNAG       I    +   +  +  N  G  L      
Sbjct: 62  QQVAALFERAVEEFGGLDLLVNNAGAMHLTPAIIDTDLAVWDQTMAINLRGTFLCCRHAA 121

Query: 150 PLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTW 209
           P        S I+N+SS  G                            G           
Sbjct: 122 PRMIARGGGS-IVNLSSIAGQ--------------------------SGDPGYGA----- 149

Query: 210 KSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTADE 269
                      Y  SK A+   T  LA      GI  N+  PG   T +     +  A  
Sbjct: 150 -----------YGASKAAIRNLTRTLAAELRHAGIRCNALAPGLIDTPLLL---AKLAGF 195

Query: 270 --AADVGARLLLLHPQQ 284
             A   G   LL+H  Q
Sbjct: 196 EGALGPGGFHLLIHQLQ 212

These are classical SDRs, with the canonical active site tetrad and glycine-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 246

>gnl|CDD|181295 PRK08213, PRK08213, gluconate 5-dehydrogenase; Provisional

 Score = 89.2 bits (222), Expect = 6e-21
 Identities = 68/237 (28%), Positives = 101/237 (42%), Gaps = 51/237 (21%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
            A+VTG ++G+G  + + L E G  V+L+AR  E  + A   L   G+   +   DV+D 
Sbjct: 14  TALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADE 73

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLP 150
           + IE         F  +DILVNNAG ++      + VE  + V+  N  G  LL++++  
Sbjct: 74  ADIERLAEETLERFGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVA- 132

Query: 151 LFRRS--PSKS-RILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDG 207
             +RS  P    RI+N++S                          +    GL        
Sbjct: 133 --KRSMIPRGYGRIINVAS--------------------------VA---GL-------- 153

Query: 208 TWKSQGWPEIWTD---YAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG 261
                G P    D   Y  SK A+  +T  LA  +   GI VN+  PGF  T MT+G
Sbjct: 154 ----GGNPPEVMDTIAYNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTRG 206

Length = 259

>gnl|CDD|187635 cd08930, SDR_c8, classical (c) SDR, subgroup 8

 Score = 88.9 bits (221), Expect = 7e-21
 Identities = 58/230 (25%), Positives = 92/230 (40%), Gaps = 40/230 (17%)

Query: 29  KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESL-SEKGLPVNFFQLD 87
           ++ I ++TGA   IG A  K L   G  +IL   +    ++  E L +     V   +LD
Sbjct: 1   EDKIILITGAAGLIGKAFCKALLSAGARLILADINAPALEQLKEELTNLYKNRVIALELD 60

Query: 88  VSDPSSIEAFVSWFKSNFAALDILVNNAGVSFND----IYKNTVEHAETVIRTNFYGAKL 143
           ++   SI+  +  +   F  +DIL+NNA  S         +   E    V+  N  GA L
Sbjct: 61  ITSKESIKELIESYLEKFGRIDILINNAYPSPKVWGSRFEEFPYEQWNEVLNVNLGGAFL 120

Query: 144 LTESLLPLFRRSPSKSRILNISSRLGTLS-KVRNPNIKSILEDEELSEEQIERFVGLFLQ 202
            +++ + LF++   K  I+NI+S  G ++   R                           
Sbjct: 121 CSQAFIKLFKKQ-GKGSIINIASIYGVIAPDFRI-------------------------- 153

Query: 203 SVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPG 252
             ++    S   P     Y+V K  +   T  LAK Y   GI VN+  PG
Sbjct: 154 -YENTQMYS---PVE---YSVIKAGIIHLTKYLAKYYADTGIRVNAISPG 196

This subgroup has a fairly well conserved active site tetrad and domain size of the classical SDRs, but has an atypical NAD-binding motif ([ST]G[GA]XGXXG). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|188169 TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reductase

 Score = 87.9 bits (218), Expect = 2e-20
 Identities = 64/232 (27%), Positives = 98/232 (42%), Gaps = 49/232 (21%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLP---VNFFQLDV 88
           IA+VTG   GIG A+ +RLA+ G  V       E  +RA   L E+G         + DV
Sbjct: 2   IALVTGGMGGIGTAICQRLAKDGYRVAANCGPNE--ERAEAWLQEQGALGFDFRVVEGDV 59

Query: 89  SDPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIY-KNTVEHAETVIRTNFYGAKLLTES 147
           S   S +A V+  ++    +D+LVNNAG++ +  + K T E    VI TN      +T+ 
Sbjct: 60  SSFESCKAAVAKVEAELGPIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQP 119

Query: 148 LLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDG 207
           ++   R      RI+NISS                          +    G F Q     
Sbjct: 120 VIDGMRERGW-GRIINISS--------------------------VNGQKGQFGQ----- 147

Query: 208 TWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMT 259
                      T+Y+ +K  +  +T  LA+    +G++VN+  PG+  T M 
Sbjct: 148 -----------TNYSAAKAGMIGFTKALAQEGATKGVTVNTISPGYIATDMV 188

This model represent acetoacetyl-CoA reductase, a member of the family short-chain-alcohol dehydrogenases. Note that, despite the precision implied by the enzyme name, the reaction of EC 1.1.1.36 is defined more generally as (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. Length = 242

>gnl|CDD|187643 cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR

 Score = 87.7 bits (218), Expect = 2e-20
 Identities = 60/263 (22%), Positives = 99/263 (37%), Gaps = 69/263 (26%)

Query: 33  AIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLP----VNFFQLDV 88
            ++TG + GIG AL K L + G  VI+ AR   + + AVE +  +       V++   D+
Sbjct: 4   VLITGGSSGIGKALAKELVKEGANVIIVARSESKLEEAVEEIEAEANASGQKVSYISADL 63

Query: 89  SDPSSIEAFVSWFKSNFAALDILVNNAGVS----FNDIYKNTVEHAETVIRTNFYGAKLL 144
           SD   +E   +         D++VN AG+S    F D+   T E  E  +  N++G+  +
Sbjct: 64  SDYEEVEQAFAQAVEKGGPPDLVVNCAGISIPGLFEDL---TAEEFERGMDVNYFGSLNV 120

Query: 145 TESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSV 204
             ++LPL  +      I+ +SS+                             VG++    
Sbjct: 121 AHAVLPLM-KEQRPGHIVFVSSQAA--------------------------LVGIY---- 149

Query: 205 KDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQT-------- 256
             G          ++ Y  SK AL      L +  +   I V+   P  T T        
Sbjct: 150 --G----------YSAYCPSKFALRGLAESLRQELKPYNIRVSVVYPPDTDTPGFEEENK 197

Query: 257 -------SMTQGQGSHTADEAAD 272
                  ++    G  T +EAA 
Sbjct: 198 TKPEETKAIEGSSGPITPEEAAR 220

These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 239

>gnl|CDD|235737 PRK06197, PRK06197, short chain dehydrogenase; Provisional

 Score = 88.2 bits (219), Expect = 3e-20
 Identities = 43/137 (31%), Positives = 72/137 (52%), Gaps = 4/137 (2%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESL--SEKGLPVNFFQLDVS 89
           +A+VTGAN G+G+     LA  G  V+L  R++++G+ A   +  +  G  V   +LD++
Sbjct: 18  VAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLT 77

Query: 90  DPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLL 149
             +S+ A     ++ +  +D+L+NNAGV +    + T +  E    TN  G   LT  LL
Sbjct: 78  SLASVRAAADALRAAYPRIDLLINNAGVMYTP-KQTTADGFELQFGTNHLGHFALTGLLL 136

Query: 150 PLFRRSPSKSRILNISS 166
                 P  SR++ +SS
Sbjct: 137 DRLLPVPG-SRVVTVSS 152

Length = 306

>gnl|CDD|180744 PRK06914, PRK06914, short chain dehydrogenase; Provisional

 Score = 87.4 bits (217), Expect = 4e-20
 Identities = 50/141 (35%), Positives = 73/141 (51%), Gaps = 11/141 (7%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGL--PVNFFQLDVS 89
           IAIVTGA+ G G      LA+ G  VI T R+ E+ +  +   ++  L   +   QLDV+
Sbjct: 5   IAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVT 64

Query: 90  DPSSIEAFVSWFKSNFAALDILVNNAGVSF----NDIYKNTVEHAETVIRTNFYGAKLLT 145
           D +SI  F          +D+LVNNAG +      +I    VE       TN +GA  +T
Sbjct: 65  DQNSIHNF-QLVLKEIGRIDLLVNNAGYANGGFVEEI---PVEEYRKQFETNVFGAISVT 120

Query: 146 ESLLPLFRRSPSKSRILNISS 166
           +++LP  R+  S  +I+NISS
Sbjct: 121 QAVLPYMRKQKS-GKIINISS 140

Length = 280

>gnl|CDD|236094 PRK07774, PRK07774, short chain dehydrogenase; Provisional

 Score = 86.7 bits (215), Expect = 5e-20
 Identities = 58/232 (25%), Positives = 88/232 (37%), Gaps = 50/232 (21%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           +AIVTGA  GIG A  + LA  G +V++   + E  +R  + +   G      Q+DVSDP
Sbjct: 8   VAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDP 67

Query: 92  SSIEAFVSWFKSNFAALDILVNNA----GVSFNDIYKNTVEHAETVIRTNFYGAKLLTES 147
            S +A      S F  +D LVNNA    G+  + +     ++ +  +  N  GA + T +
Sbjct: 68  DSAKAMADATVSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRA 127

Query: 148 LLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDG 207
           +     +      I+N SS                                         
Sbjct: 128 VYKHMAKR-GGGAIVNQSST---------------------------------------A 147

Query: 208 TWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMT 259
            W    +      Y ++K+ LN  T  LA+   G  I VN+  PG   T  T
Sbjct: 148 AWLYSNF------YGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEAT 193

Length = 250

>gnl|CDD|187627 cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reductase (TER) and 2,4-dienoyl-CoA reductase (DECR), atypical (a) SDR

 Score = 84.9 bits (211), Expect = 2e-19
 Identities = 45/140 (32%), Positives = 66/140 (47%), Gaps = 2/140 (1%)

Query: 29  KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGL-PVNFFQLD 87
           K  +A +TG   GIG A+ K  AELG +V +  R  E  + A E +S       +  Q D
Sbjct: 2   KGKVAFITGGGTGIGKAIAKAFAELGASVAIAGRKPEVLEAAAEEISSATGGRAHPIQCD 61

Query: 88  VSDPSSIEAFVSWFKSNFAALDILVNNAGVSF-NDIYKNTVEHAETVIRTNFYGAKLLTE 146
           V DP ++EA V      F  +DIL+NNA  +F       +    +TVI  +  G    T+
Sbjct: 62  VRDPEAVEAAVDETLKEFGKIDILINNAAGNFLAPAESLSPNGFKTVIDIDLNGTFNTTK 121

Query: 147 SLLPLFRRSPSKSRILNISS 166
           ++      +     ILNIS+
Sbjct: 122 AVGKRLIEAKHGGSILNISA 141

TTER is a peroxisomal protein with a proposed role in fatty acid elongation. Fatty acid synthesis is known to occur in the both endoplasmic reticulum and mitochondria; peroxisomal TER has been proposed as an additional fatty acid elongation system, it reduces the double bond at C-2 as the last step of elongation. This system resembles the mitochondrial system in that acetyl-CoA is used as a carbon donor. TER may also function in phytol metabolism, reducting phytenoyl-CoA to phytanoyl-CoA in peroxisomes. DECR processes double bonds in fatty acids to increase their utility in fatty acid metabolism; it reduces 2,4-dienoyl-CoA to an enoyl-CoA. DECR is active in mitochondria and peroxisomes. This subgroup has the Gly-rich NAD-binding motif of the classical SDR family, but does not display strong identity to the canonical active site tetrad, and lacks the characteristic Tyr at the usual position. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 249

>gnl|CDD|181335 PRK08264, PRK08264, short chain dehydrogenase; Validated

 Score = 84.6 bits (210), Expect = 2e-19
 Identities = 72/259 (27%), Positives = 107/259 (41%), Gaps = 70/259 (27%)

Query: 29  KETIAIVTGANKGIGFALVKRLAELGLT-VILTARDVERGQRAVESLSEKGLPVNFFQLD 87
           K  + +VTGAN+GIG A V++L   G   V   ARD E    +V  L  + +P+   QLD
Sbjct: 5   KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPE----SVTDLGPRVVPL---QLD 57

Query: 88  VSDPSSIEAFVSWFKSNFAA--LDILVNNAGVSFNDIYKNTVEHAETVIR----TNFYGA 141
           V+DP+S+ A         AA  + ILVNNAG+         +E  E  +R    TN++G 
Sbjct: 58  VTDPASVAAAAE------AASDVTILVNNAGI--FRTGSLLLEGDEDALRAEMETNYFGP 109

Query: 142 KLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFL 201
             +  +  P+   +     I+N+ S L                                 
Sbjct: 110 LAMARAFAPVLAANGG-GAIVNVLSVLS-------------------------------- 136

Query: 202 QSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYE--GEGISVNSYCPGFTQTSMT 259
                  W +  +P + T Y+ SK A  A+++  A R E   +G  V    PG   T M 
Sbjct: 137 -------WVN--FPNLGT-YSASKAA--AWSLTQALRAELAPQGTRVLGVHPGPIDTDMA 184

Query: 260 QGQGSHTADEAADVGARLL 278
            G  +  A   ADV  ++L
Sbjct: 185 AGLDAPKAS-PADVARQIL 202

Length = 238

>gnl|CDD|187596 cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 1, classical (c) SDR

 Score = 84.8 bits (210), Expect = 2e-19
 Identities = 65/238 (27%), Positives = 98/238 (41%), Gaps = 53/238 (22%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTV-ILTARDVERGQRAVESLSEKGLPVNFFQLDVSD 90
           +AIVTGA++GIG A+   LA  G  + I    D ++    V  +   G    +FQ D+ +
Sbjct: 3   VAIVTGASRGIGRAIATELAARGFDIAINDLPDDDQATEVVAEVLAAGRRAIYFQADIGE 62

Query: 91  PSSIEAFVSWFKSNFAALDILVNNAGVSF---NDIYKNTVEHAETVIRTNFYGAKLLTES 147
            S  EA +     +F  LD LVNNAG++     D+   T +  + +I  N  G   LT++
Sbjct: 63  LSDHEALLDQAWEDFGRLDCLVNNAGIAVRPRGDLLDLTEDSFDRLIAINLRGPFFLTQA 122

Query: 148 LL------PLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFL 201
           +       P     P +S I+ ++S            I +                   L
Sbjct: 123 VARRMVEQPDRFDGPHRS-IIFVTS------------INAY------------------L 151

Query: 202 QSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMT 259
            S   G            +Y +SK  L+  T +LA R   EGI+V+   PG   T MT
Sbjct: 152 VSPNRG------------EYCISKAGLSMATRLLAYRLADEGIAVHEIRPGLIHTDMT 197

This subgroup includes Escherichia coli CFT073 FabG. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 255

>gnl|CDD|236040 PRK07523, PRK07523, gluconate 5-dehydrogenase; Provisional

 Score = 84.4 bits (209), Expect = 4e-19
 Identities = 49/139 (35%), Positives = 77/139 (55%), Gaps = 10/139 (7%)

Query: 33  AIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPS 92
           A+VTG+++GIG+AL + LA+ G  VIL  RD  +   A ESL  +GL  +    DV+D  
Sbjct: 13  ALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHD 72

Query: 93  SIEAFVSWFKSNFAALDILVNNAGVSFNDIYKN-TVEHAETVIRTN----FYGAKLLTES 147
           ++ A +  F++    +DILVNNAG+ F    ++   +  E ++RTN    FY  + +   
Sbjct: 73  AVRAAIDAFEAEIGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVAR- 131

Query: 148 LLPLFRRSPSKSRILNISS 166
              +  R   K  I+NI+S
Sbjct: 132 --HMIARGAGK--IINIAS 146

Length = 255

>gnl|CDD|183778 PRK12829, PRK12829, short chain dehydrogenase; Provisional

 Score = 84.0 bits (208), Expect = 7e-19
 Identities = 58/231 (25%), Positives = 80/231 (34%), Gaps = 46/231 (19%)

Query: 33  AIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPS 92
            +VTG   GIG A+ +  AE G  V +              L   G  V     DV+DP+
Sbjct: 14  VLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLP--GAKVTATVADVADPA 71

Query: 93  SIEAFVSWFKSNFAALDILVNNAGVSFND--IYKNTVEHAETVIRTNFYGAKLLTESLLP 150
            +E         F  LD+LVNNAG++     I + T E  E  +  N  G      + +P
Sbjct: 72  QVERVFDTAVERFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVP 131

Query: 151 LFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWK 210
           L + S     I+ +SS  G L                                       
Sbjct: 132 LLKASGHGGVIIALSSVAGRL--------------------------------------- 152

Query: 211 SQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG 261
             G+P   T YA SK A+      LA      GI VN+  PG  +    + 
Sbjct: 153 --GYP-GRTPYAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMRR 200

Length = 264

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score = 85.7 bits (212), Expect = 1e-18
 Identities = 60/234 (25%), Positives = 91/234 (38%), Gaps = 48/234 (20%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           + +VTGA  GIG A  +R A  G  V++  R+VER +   +SL           +DVSD 
Sbjct: 7   VVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHA---LAMDVSDE 63

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVS---FNDIYKNTVEHAETVIRTNFYGAKLLTESL 148
           + I          F  +D+LVNNAGV+          T+E    +   N  GA L+    
Sbjct: 64  AQIREGFEQLHREFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREA 123

Query: 149 LPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGT 208
           L L       + I+N++S  G ++    P   +                           
Sbjct: 124 LRLMIEQGHGAAIVNVASGAGLVA---LPKRTA--------------------------- 153

Query: 209 WKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ 262
                       Y+ SK A+ + T  LA  +  +GI VN+  PG+ +T M    
Sbjct: 154 ------------YSASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQMVAEL 195

Length = 520

>gnl|CDD|181305 PRK08226, PRK08226, short chain dehydrogenase; Provisional

 Score = 83.3 bits (206), Expect = 1e-18
 Identities = 64/234 (27%), Positives = 96/234 (41%), Gaps = 50/234 (21%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
            A++TGA +GIG  + +  A  G  +IL        ++  + L  +G        DV DP
Sbjct: 8   TALITGALQGIGEGIARVFARHGANLILLDIS-PEIEKLADELCGRGHRCTAVVADVRDP 66

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGV----SFNDIYKNTVEHAETVIRTNFYGAKLLTES 147
           +S+ A +   K     +DILVNNAGV    SF D+   + E  +  I  N  G   +T++
Sbjct: 67  ASVAAAIKRAKEKEGRIDILVNNAGVCRLGSFLDM---SDEDRDFHIDINIKGVWNVTKA 123

Query: 148 LLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDG 207
           +LP    +    RI+ +SS  G +                                V D 
Sbjct: 124 VLP-EMIARKDGRIVMMSSVTGDM--------------------------------VAD- 149

Query: 208 TWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG 261
                      T YA++K A+   T  LA  Y   GI VN+ CPG+ +T M + 
Sbjct: 150 --------PGETAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAES 195

Length = 263

>gnl|CDD|187608 cd05350, SDR_c6, classical (c) SDR, subgroup 6

 Score = 82.4 bits (204), Expect = 1e-18
 Identities = 57/228 (25%), Positives = 87/228 (38%), Gaps = 44/228 (19%)

Query: 33  AIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPS 92
            ++TGA+ GIG AL +  A+ G  V L AR  +R       L      V    LDV+D  
Sbjct: 1   VLITGASSGIGRALAREFAKAGYNVALAARRTDRLDELKAELLNPNPSVEVEILDVTDEE 60

Query: 93  SIEAFVSWFKSNFAALDILVNNAGVSF-NDIYKNTVEHAETVIRTNFYGAKLLTESLLPL 151
             +  ++  ++    LD+++ NAGV     +   + +     I TN  GA  + E+ LP 
Sbjct: 61  RNQLVIAELEAELGGLDLVIINAGVGKGTSLGDLSFKAFRETIDTNLLGAAAILEAALPQ 120

Query: 152 FRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKS 211
           FR       ++ ISS    ++ +R                                    
Sbjct: 121 FRAKGR-GHLVLISS----VAALR------------------------------------ 139

Query: 212 QGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMT 259
            G P     Y+ SK AL++    L    +  GI V    PGF  T +T
Sbjct: 140 -GLPGA-AAYSASKAALSSLAESLRYDVKKRGIRVTVINPGFIDTPLT 185

These proteins are members of the classical SDR family, with a canonical active site tetrad and a fairly well conserved typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|236372 PRK09072, PRK09072, short chain dehydrogenase; Provisional

 Score = 82.7 bits (205), Expect = 2e-18
 Identities = 68/287 (23%), Positives = 114/287 (39%), Gaps = 62/287 (21%)

Query: 27  WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQL 86
              + + ++TGA+ GIG AL + LA  G  ++L  R+ E+ +     L   G    +   
Sbjct: 3   LKDKRV-LLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPG-RHRWVVA 60

Query: 87  DVSDPSSIEAFVSWFKSNFAALDILVNNAGVS-FNDIYKNTVEHAETVIRTNFYGAKLLT 145
           D++  +  EA V         +++L+NNAGV+ F  +     E  E ++  N      LT
Sbjct: 61  DLTSEAGREA-VLARAREMGGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLT 119

Query: 146 ESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVK 205
            +LLPL R     + ++N+ S  G           SI                       
Sbjct: 120 RALLPLLRA-QPSAMVVNVGSTFG-----------SI----------------------- 144

Query: 206 DGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMT------ 259
                  G+P  +  Y  SK AL  ++  L +     G+ V    P  T+T+M       
Sbjct: 145 -------GYPG-YASYCASKFALRGFSEALRRELADTGVRVLYLAPRATRTAMNSEAVQA 196

Query: 260 --QGQGSHTADEAADVGARLLLLHPQQLPTAKFYIGLDP---FVKSN 301
             +  G+   D+  DV A +L    ++   A+ ++G  P   FV+ N
Sbjct: 197 LNRALGNAM-DDPEDVAAAVLQAIEKE--RAERWLGW-PEKLFVRLN 239

Length = 263

>gnl|CDD|235924 PRK07063, PRK07063, short chain dehydrogenase; Provisional

 Score = 82.4 bits (204), Expect = 2e-18
 Identities = 70/256 (27%), Positives = 102/256 (39%), Gaps = 51/256 (19%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLP--VNFFQLDVS 89
           +A+VTGA +GIG A+ +  A  G  V L   D    +RA  +++       V     DV+
Sbjct: 9   VALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVT 68

Query: 90  DPSSIEAFVSWFKSNFAALDILVNNAGVS-FNDIYKNTVEHAETVIRTNFYGAKLLTESL 148
           D +S+ A V+  +  F  LD+LVNNAG++ F D    T E        +  GA     ++
Sbjct: 69  DAASVAAAVAAAEEAFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAV 128

Query: 149 LP--LFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKD 206
           LP  + R   S   I+NI+S               I+              G F      
Sbjct: 129 LPGMVERGRGS---IVNIASTHAF----------KIIP-------------GCF------ 156

Query: 207 GTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHT 266
                   P     Y V+K  L   T  L   Y    + VN+  PG+ +T +T+   +  
Sbjct: 157 --------P-----YPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWNAQ 203

Query: 267 ADEAADVGARLLLLHP 282
            D AA   A  L L P
Sbjct: 204 PDPAAA-RAETLALQP 218

Length = 260

>gnl|CDD|187589 cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid dehydrogenase (3alpha_HSD), classical (c) SDRs

 Score = 82.2 bits (203), Expect = 2e-18
 Identities = 60/230 (26%), Positives = 92/230 (40%), Gaps = 44/230 (19%)

Query: 34  IVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSS 93
           ++TGA  GIG A  + L + G TVI    D+                      D+S P  
Sbjct: 3   VITGAASGIGAATAELLEDAGHTVI--GIDLREA---------------DVIADLSTPEG 45

Query: 94  IEAFVSWFKS-NFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLF 152
             A ++   +     LD LVN AGV            A  V++ N++G + L E+LLP  
Sbjct: 46  RAAAIADVLARCSGVLDGLVNCAGVG-------GTTVAGLVLKVNYFGLRALMEALLPRL 98

Query: 153 RRSPSKSRILNISSRLGT-LSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKS 211
           R+       + +SS  G   ++ +    K++    E       R V L   + + G    
Sbjct: 99  RKGHG-PAAVVVSSIAGAGWAQDKLELAKALAAGTE------ARAVALAEHAGQPG---- 147

Query: 212 QGWPEIWTDYAVSKLALNAYTMVLAKRYE-GEGISVNSYCPGFTQTSMTQ 260
                 +  YA SK AL  +T   A  +  G G+ VN+  PG  +T + Q
Sbjct: 148 ------YLAYAGSKEALTVWTRRRAATWLYGAGVRVNTVAPGPVETPILQ 191

Bacterial 3-alpha_HSD, which catalyzes the NAD-dependent oxidoreduction of hydroxysteroids, is a dimeric member of the classical SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|213929 TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase

 Score = 81.9 bits (203), Expect = 2e-18
 Identities = 39/135 (28%), Positives = 70/135 (51%), Gaps = 2/135 (1%)

Query: 33  AIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPS 92
            +VTGA +GIG+A+ + LAE G  V    R+ E+    V  L   G P   ++LDV+D +
Sbjct: 1   VLVTGAAQGIGYAVARALAEAGARVAAVDRNFEQLLELVADLRRYGYPFATYKLDVADSA 60

Query: 93  SIEAFVSWFKSNFAALDILVNNAGV-SFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPL 151
           +++  V   +  +  +D+LVN AG+     I   + E  +     N +G   +++++ P 
Sbjct: 61  AVDEVVQRLEREYGPIDVLVNVAGILRLGAIDSLSDEDWQATFAVNTFGVFNVSQAVSPR 120

Query: 152 FRRSPSKSRILNISS 166
            +R  S + I+ + S
Sbjct: 121 MKRRRSGA-IVTVGS 134

Members of this family are 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28), the third enzyme in the biosynthesis of 2,3-dihydroxybenzoic acid (DHB) from chorismate. The first two enzymes are isochorismate synthase (EC 5.4.4.2) and isochorismatase (EC 3.3.2.1). Synthesis is often followed by adenylation by the enzyme DHBA-AMP ligase (EC 2.7.7.58) to activate (DHB) for a non-ribosomal peptide synthetase. Length = 250

>gnl|CDD|187646 cd08942, RhlG_SDR_c, RhlG and related beta-ketoacyl reductases, classical (c) SDRs

 Score = 81.8 bits (202), Expect = 3e-18
 Identities = 68/237 (28%), Positives = 98/237 (41%), Gaps = 54/237 (22%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKG----LPVNFFQLD 87
           I +VTG ++GIG  + +   E G  VI++AR  E    A E LS  G    +P      D
Sbjct: 8   IVLVTGGSRGIGRMIAQGFLEAGARVIISARKAEACADAAEELSAYGECIAIPA-----D 62

Query: 88  VSDPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHA-ETVIRTNFYGAKLLTE 146
           +S    IEA V+        LD+LVNNAG ++    +   E   + V+  N      LT+
Sbjct: 63  LSSEEGIEALVARVAERSDRLDVLVNNAGATWGAPLEAFPESGWDKVMDINVKSVFFLTQ 122

Query: 147 SLLPLFRRSPSK---SRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQS 203
           +LLPL R + +    +R++NI S                          I   V   L++
Sbjct: 123 ALLPLLRAAATAENPARVINIGS--------------------------IAGIVVSGLEN 156

Query: 204 VKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ 260
                            Y  SK A++  T  LAK   GE I+VN+  PG   + MT 
Sbjct: 157 YS---------------YGASKAAVHQLTRKLAKELAGEHITVNAIAPGRFPSKMTA 198

Pseudomonas aeruginosa RhlG is an SDR-family beta-ketoacyl reductase involved in Rhamnolipid biosynthesis. RhlG is similar to but distinct from the FabG family of beta-ketoacyl-acyl carrier protein (ACP) of type II fatty acid synthesis. RhlG and related proteins are classical SDRs, with a canonical active site tetrad and glycine-rich NAD(P)-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187669 cd09809, human_WWOX_like_SDR_c-like, human WWOX (WW domain-containing oxidoreductase)-like, classical (c)-like SDRs

 Score = 82.6 bits (204), Expect = 3e-18
 Identities = 62/223 (27%), Positives = 95/223 (42%), Gaps = 26/223 (11%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKG--LPVNFFQLDVS 89
           + I+TGAN GIGF   +  A  G  VIL  R++ R   AV  + E+     V    LD++
Sbjct: 3   VIIITGANSGIGFETARSFALHGAHVILACRNMSRASAAVSRILEEWHKARVEAMTLDLA 62

Query: 90  DPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLL 149
              S++ F   FK+  + L +LV NA V F   +  T +  ET  + N  G   L + L 
Sbjct: 63  SLRSVQRFAEAFKAKNSPLHVLVCNAAV-FALPWTLTEDGLETTFQVNHLGHFYLVQLLE 121

Query: 150 PLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTW 209
            + RRS + +R++ +SS        R  ++     + + S           L   K   W
Sbjct: 122 DVLRRS-APARVIVVSSE-----SHRFTDLPDSCGNLDFS----------LLSPPKKKYW 165

Query: 210 KSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPG 252
                      Y  +KL    ++  L +R    GI+ NS  PG
Sbjct: 166 SMLA-------YNRAKLCNILFSNELHRRLSPRGITSNSLHPG 201

Classical-like SDR domain of human WWOX and related proteins. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 284

>gnl|CDD|180604 PRK06523, PRK06523, short chain dehydrogenase; Provisional

 Score = 81.1 bits (201), Expect = 5e-18
 Identities = 64/245 (26%), Positives = 91/245 (37%), Gaps = 60/245 (24%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
            A+VTG  KGIG A V RL E G  V+ TAR         + L E    V F   D++  
Sbjct: 11  RALVTGGTKGIGAATVARLLEAGARVVTTAR------SRPDDLPE---GVEFVAADLTTA 61

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVS------FNDIYKNTVEHAETVIRTNFYGAKLLT 145
               A           +DILV+  G S      F  +   T E  +  +  N   A  L 
Sbjct: 62  EGCAAVARAVLERLGGVDILVHVLGGSSAPAGGFAAL---TDEEWQDELNLNLLAAVRLD 118

Query: 146 ESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVK 205
            +LLP      S   I++++S                          I+R + L      
Sbjct: 119 RALLPGMIARGSGV-IIHVTS--------------------------IQRRLPL------ 145

Query: 206 DGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSH 265
                    PE  T YA +K AL+ Y+  L+K    +G+ VN+  PG+ +T         
Sbjct: 146 ---------PESTTAYAAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAVALAER 196

Query: 266 TADEA 270
            A+ A
Sbjct: 197 LAEAA 201

Length = 260

>gnl|CDD|187670 cd09810, LPOR_like_SDR_c_like, light-dependent protochlorophyllide reductase (LPOR)-like, classical (c)-like SDRs

 Score = 82.2 bits (203), Expect = 6e-18
 Identities = 63/231 (27%), Positives = 99/231 (42%), Gaps = 16/231 (6%)

Query: 33  AIVTGANKGIGFALVKRLAELGL-TVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
            ++TGA+ G+G A  K LA  G   V++  RD  + ++A + +       +    D++  
Sbjct: 4   VVITGASSGLGLAAAKALARRGEWHVVMACRDFLKAEQAAQEVGMPKDSYSVLHCDLASL 63

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSFNDIYK--NTVEHAETVIRTNFYGAKLLTESLL 149
            S+  FV  F+     LD LV NA V      +   T +  E  +  N  G  LLT  LL
Sbjct: 64  DSVRQFVDNFRRTGRPLDALVCNAAVYLPTAKEPRFTADGFELTVGVNHLGHFLLTNLLL 123

Query: 150 PLFRRSPSKS-RILNISSRLGTLSKVR-NPNIKSILEDEELSEEQIERFVGLFLQSVKDG 207
              +RS + S RI+ + S     + +  N   ++ L D E     ++ F      S+ DG
Sbjct: 124 EDLQRSENASPRIVIVGSITHNPNTLAGNVPPRATLGDLEGLAGGLKGF-----NSMIDG 178

Query: 208 TWKSQGWPEIWTDYAVSKLALNAYTMVLAKRY-EGEGISVNSYCPGFTQTS 257
             + +G       Y  SK+     T  L +R  E  GI+ NS  PG    +
Sbjct: 179 G-EFEGAKA----YKDSKVCNMLTTYELHRRLHEETGITFNSLYPGCIAET 224

Classical SDR-like subgroup containing LPOR and related proteins. Protochlorophyllide (Pchlide) reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 311

>gnl|CDD|187598 cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hydroxysteroid dehydrogenase XI-like, classical (c) SDRs

 Score = 80.4 bits (199), Expect = 9e-18
 Identities = 54/235 (22%), Positives = 81/235 (34%), Gaps = 49/235 (20%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           I ++TG   GIG  L    A+ G  V++   + +  +    ++ + G  V++++ DVS  
Sbjct: 1   IVLITGGGSGIGRLLALEFAKRGAKVVILDINEKGAEETANNVRKAGGKVHYYKCDVSKR 60

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGV-SFNDIYKNTVEHAETVIRTNFYGAKLLTESLLP 150
             +       K     + IL+NNAGV S   + +   E  E     N       T++ LP
Sbjct: 61  EEVYEAAKKIKKEVGDVTILINNAGVVSGKKLLELPDEEIEKTFEVNTLAHFWTTKAFLP 120

Query: 151 LFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWK 210
                     I+ I+S  G +S                         GL           
Sbjct: 121 DMLERN-HGHIVTIASVAGLISP-----------------------AGL----------- 145

Query: 211 SQGWPEIWTDYAVSKLAL----NAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG 261
                    DY  SK A      +  + L K Y   GI     CP F  T M QG
Sbjct: 146 --------ADYCASKAAAVGFHESLRLEL-KAYGKPGIKTTLVCPYFINTGMFQG 191

17-beta-hydroxysteroid dehydrogenases (17betaHSD) are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. 17betaHSD type XI, a classical SDR, preferentially converts 3alpha-adiol to androsterone but not numerous other tested steroids. This subgroup of classical SDRs also includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|181136 PRK07825, PRK07825, short chain dehydrogenase; Provisional

 Score = 80.8 bits (200), Expect = 1e-17
 Identities = 63/260 (24%), Positives = 93/260 (35%), Gaps = 74/260 (28%)

Query: 31  TIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSD 90
            +AI TG  +GIG A  + LA LG  V +   D    +     L      V    LDV+D
Sbjct: 7   VVAI-TGGARGIGLATARALAALGARVAIGDLDEALAKETAAELG----LVVGGPLDVTD 61

Query: 91  PSSIEAFVSWFKSNFAALDILVNNAGV----SFNDIYKNTVEHAETVIR----TNFY--- 139
           P+S  AF+   +++   +D+LVNNAGV     F       ++  + V R     N Y   
Sbjct: 62  PASFAAFLDAVEADLGPIDVLVNNAGVMPVGPF-------LDEPDAVTRRILDVNVYGVI 114

Query: 140 -GAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVG 198
            G+KL    ++P  R       ++N++S  G +                          G
Sbjct: 115 LGSKLAAPRMVP--RGR---GHVVNVASLAGKIP-----------------------VPG 146

Query: 199 LFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSM 258
           +                     Y  SK A+  +T        G G+ V+   P F  T +
Sbjct: 147 M-------------------ATYCASKHAVVGFTDAARLELRGTGVHVSVVLPSFVNTEL 187

Query: 259 TQGQGSHTAD---EAADVGA 275
             G G        E  DV A
Sbjct: 188 IAGTGGAKGFKNVEPEDVAA 207

Length = 273

>gnl|CDD|180773 PRK06949, PRK06949, short chain dehydrogenase; Provisional

 Score = 80.2 bits (198), Expect = 1e-17
 Identities = 69/254 (27%), Positives = 110/254 (43%), Gaps = 42/254 (16%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           +A+VTGA+ G+G    + LA+ G  V+L +R VER +     +  +G   +   LDV+D 
Sbjct: 11  VALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDY 70

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSFND-IYKNTVEHAETVIRTNFYGAKLLTESLLP 150
            SI+A V+  ++    +DILVNN+GVS    +   T    + V  TN  GA  + + +  
Sbjct: 71  QSIKAAVAHAETEAGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEV-- 128

Query: 151 LFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWK 210
                 +K  I        T    R  NI S+     L +      +GL           
Sbjct: 129 ------AKRMIARAKGAGNTKPGGRIINIASVAGLRVLPQ------IGL----------- 165

Query: 211 SQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTADEA 270
                     Y +SK A+   T  +A  +   GI+VN+ CPG+  T +      H   E 
Sbjct: 166 ----------YCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINH---HHWETEQ 212

Query: 271 ADVGARLLLLHPQQ 284
              G +L+ + P++
Sbjct: 213 ---GQKLVSMLPRK 223

Length = 258

>gnl|CDD|187603 cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 3, classical (c) SDR

 Score = 80.1 bits (198), Expect = 1e-17
 Identities = 43/141 (30%), Positives = 67/141 (47%), Gaps = 14/141 (9%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           +AIVTGA  G G  + +R A+ G  V++   + +  +R    + E  +     Q DV+  
Sbjct: 7   VAIVTGAGSGFGEGIARRFAQEGARVVIADINADGAERVAADIGEAAI---AIQADVTKR 63

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNT----VEHAE--TVIRTNFYGAKLLT 145
           + +EA V    S F  LDILVNNAG++    ++N     V+  E   V   N     L  
Sbjct: 64  ADVEAMVEAALSKFGRLDILVNNAGIT----HRNKPMLEVDEEEFDRVFAVNVKSIYLSA 119

Query: 146 ESLLPLFRRSPSKSRILNISS 166
           ++L+P          I+NI+S
Sbjct: 120 QALVPHMEEQGGGV-IINIAS 139

This subgroup includes the putative Brucella melitensis biovar Abortus 2308 BKR, FabG, Mesorhizobium loti MAFF303099 FabG, and other classical SDRs. BKR, a member of the SDR family, catalyzes the NADPH-dependent reduction of acyl carrier protein in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of 4 elongation steps, which are repeated to extend the fatty acid chain thru the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I Fas utilizes one or 2 multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 248

>gnl|CDD|180446 PRK06180, PRK06180, short chain dehydrogenase; Provisional

 Score = 80.0 bits (198), Expect = 2e-17
 Identities = 68/266 (25%), Positives = 102/266 (38%), Gaps = 67/266 (25%)

Query: 21  VSSTKWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLP 80
           +SS K W      ++TG + G G AL +     G  V+ T R             ++ L 
Sbjct: 1   MSSMKTW------LITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDRALA 54

Query: 81  VNFFQLDVSDPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAE-TVIR---- 135
                LDV+D  +I+A V+  ++ F  +D+LVNNAG      ++  +E +    +R    
Sbjct: 55  R---LLDVTDFDAIDAVVADAEATFGPIDVLVNNAGYG----HEGAIEESPLAEMRRQFE 107

Query: 136 TNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIER 195
            N +GA  +T+++LP  R       I+NI+S +G L  +  P I                
Sbjct: 108 VNVFGAVAMTKAVLPGMRARRR-GHIVNITS-MGGL--ITMPGI---------------- 147

Query: 196 FVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQ 255
                                    Y  SK AL   +  LAK     GI V +  PG  +
Sbjct: 148 -----------------------GYYCGSKFALEGISESLAKEVAPFGIHVTAVEPGSFR 184

Query: 256 T-----SMTQGQGSHTADEAADVGAR 276
           T     SM +   S  AD  A  G  
Sbjct: 185 TDWAGRSMVRTPRS-IADYDALFGPI 209

Length = 277

>gnl|CDD|235702 PRK06124, PRK06124, gluconate 5-dehydrogenase; Provisional

 Score = 79.4 bits (196), Expect = 3e-17
 Identities = 50/244 (20%), Positives = 87/244 (35%), Gaps = 53/244 (21%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           +A+VTG+ +G+GF + + LA  G  V++  R+    + AV +L   G        D++D 
Sbjct: 13  VALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADE 72

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGV----SFNDIYKNTVEHAETVIRTNFYGAKLLTES 147
            ++ A  +   +    LDILVNN G        ++          ++ T+     LL+  
Sbjct: 73  EAVAAAFARIDAEHGRLDILVNNVGARDRRPLAEL---DDAAIRALLETDLVAPILLSRL 129

Query: 148 LLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDG 207
                +R     RI+ I+S  G +++  +                               
Sbjct: 130 AAQRMKR-QGYGRIIAITSIAGQVARAGD------------------------------- 157

Query: 208 TWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTA 267
                        Y  +K  L      LA  +   GI+ N+  PG+  T       +  A
Sbjct: 158 -----------AVYPAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNA---AMAA 203

Query: 268 DEAA 271
           D A 
Sbjct: 204 DPAV 207

Length = 256

>gnl|CDD|187629 cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydrogenase type 10 (HSD10)-like, classical (c) SDRs

 Score = 78.9 bits (195), Expect = 3e-17
 Identities = 60/238 (25%), Positives = 98/238 (41%), Gaps = 44/238 (18%)

Query: 29  KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDV 88
           K  +A+VTG   G+G A V+RL   G  V++       G    E++++ G    F  +DV
Sbjct: 1   KGLVAVVTGGASGLGLATVERLLAQGAKVVILDLPNSPG----ETVAKLGDNCRFVPVDV 56

Query: 89  SDPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESL 148
           +    ++A ++  K+ F  LDI+VN AG++                +T  Y  K      
Sbjct: 57  TSEKDVKAALALAKAKFGRLDIVVNCAGIA-------------VAAKT--YNKKGQQPHS 101

Query: 149 LPLFRRSPSKSRI--LNISSRLGTLSKVRN-PNIKSILEDEELSEEQIERFVGLFLQSVK 205
           L LF+R  + + I   N+  RL   +  +N P+               ER V +   SV 
Sbjct: 102 LELFQRVINVNLIGTFNV-IRLAAGAMGKNEPDQGG------------ERGVIINTASVA 148

Query: 206 --DGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG 261
             +G             Y+ SK  +   T+ +A+    +GI V +  PG   T +  G
Sbjct: 149 AFEGQIGQAA-------YSASKGGIVGMTLPIARDLAPQGIRVVTIAPGLFDTPLLAG 199

HSD10, also known as amyloid-peptide-binding alcohol dehydrogenase (ABAD), was previously identified as a L-3-hydroxyacyl-CoA dehydrogenase, HADH2. In fatty acid metabolism, HADH2 catalyzes the third step of beta-oxidation, the conversion of a hydroxyl to a keto group in the NAD-dependent oxidation of L-3-hydroxyacyl CoA. In addition to alcohol dehydrogenase and HADH2 activites, HSD10 has steroid dehydrogenase activity. Although the mechanism is unclear, HSD10 is implicated in the formation of amyloid beta-petide in the brain (which is linked to the development of Alzheimer's disease). Although HSD10 is normally concentrated in the mitochondria, in the presence of amyloid beta-peptide it translocates into the plasma membrane, where it's action may generate cytotoxic aldehydes and may lower estrogen levels through its use of 17-beta-estradiol as a substrate. HSD10 is a member of the SRD family, but differs from other SDRs by the presence of two insertions of unknown function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 252

>gnl|CDD|187612 cd05354, SDR_c7, classical (c) SDR, subgroup 7

 Score = 78.2 bits (193), Expect = 5e-17
 Identities = 60/239 (25%), Positives = 93/239 (38%), Gaps = 55/239 (23%)

Query: 29  KETIAIVTGANKGIGFALVKRLAELGLT-VILTARDVERGQRAVESLSEKGLP-VNFFQL 86
           K+   +VTGAN+GIG A V+ L   G   V    RD      +   L  K    V   +L
Sbjct: 2   KDKTVLVTGANRGIGKAFVESLLAHGAKKVYAAVRDPG----SAAHLVAKYGDKVVPLRL 57

Query: 87  DVSDPSSIEAFVSWFKSNFAALDILVNNAGVS--FNDIYKNTVEHAETVIRTNFYGAKLL 144
           DV+DP SI+A  +  K     +D+++NNAGV      + +  +E  +  +  N +G   L
Sbjct: 58  DVTDPESIKAAAAQAKD----VDVVINNAGVLKPATLLEEGALEALKQEMDVNVFGLLRL 113

Query: 145 TESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSV 204
            ++  P+ + +     I+N++S                                      
Sbjct: 114 AQAFAPVLKANG-GGAIVNLNSVAS----------------------------------- 137

Query: 205 KDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQG 263
                K+  +P + T Y+ SK A  + T  L      +G  V S  PG   T M  G G
Sbjct: 138 ----LKN--FPAMGT-YSASKSAAYSLTQGLRAELAAQGTLVLSVHPGPIDTRMAAGAG 189

These proteins are members of the classical SDR family, with a canonical active site triad (and also an active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 235

>gnl|CDD|187644 cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydrogenase (HBDH), classical (c) SDRs

 Score = 78.6 bits (194), Expect = 5e-17
 Identities = 72/269 (26%), Positives = 113/269 (42%), Gaps = 59/269 (21%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTA-RDVERGQRAVESLSEK-GLPVNFFQLDVS 89
           +A+VTG+  GIG  + + LA  G  ++L    D    +     L+ K G+ V +   D+S
Sbjct: 4   VALVTGSTSGIGLGIARALAAAGANIVLNGFGDAAEIEAVRAGLAAKHGVKVLYHGADLS 63

Query: 90  DPSSIEAFVSWFKSNFAALDILVNNAGVSF-NDIYKNTVEHAETVIRTN----FYGAKLL 144
            P++IE  V++ +  F  +DILVNNAG+     I     E  + +I  N    F+  +L 
Sbjct: 64  KPAAIEDMVAYAQRQFGGVDILVNNAGIQHVAPIEDFPTEKWDAIIALNLSAVFHTTRL- 122

Query: 145 TESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSV 204
               LP  ++     RI+NI+S  G    V + N                          
Sbjct: 123 ---ALPHMKKQ-GWGRIINIASVHG---LVASAN-------------------------- 149

Query: 205 KDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGS 264
                KS         Y  +K  +   T V+A    G G++ N+ CPG+  T + + Q S
Sbjct: 150 -----KSA--------YVAAKHGVVGLTKVVALETAGTGVTCNAICPGWVLTPLVEKQIS 196

Query: 265 HTADE---AADVGARLLLLHPQQLPTAKF 290
             A +     +  AR LLL  Q  P+ +F
Sbjct: 197 ALAQKNGVPQEQAARELLLEKQ--PSKQF 223

DHBDH, an NAD+ -dependent enzyme, catalyzes the interconversion of D-3-hydroxybutyrate and acetoacetate. It is a classical SDR, with the canonical NAD-binding motif and active site tetrad. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|183832 PRK12935, PRK12935, acetoacetyl-CoA reductase; Provisional

 Score = 78.1 bits (192), Expect = 6e-17
 Identities = 65/229 (28%), Positives = 95/229 (41%), Gaps = 45/229 (19%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDV-ERGQRAVESLSEKGLPVNFFQLDVSD 90
           +AIVTG  KGIG A+   LA+ G  V++      E  +  V  L ++G  V   Q DVS 
Sbjct: 8   VAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSK 67

Query: 91  PSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKN-TVEHAETVIRTNFYGAKLLTESLL 149
                  V    ++F  +DILVNNAG++ +  +K    E  E VI  N       T ++L
Sbjct: 68  VEDANRLVEEAVNHFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVL 127

Query: 150 PLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTW 209
           P    +  + RI++ISS +G                            G F Q       
Sbjct: 128 PYITEA-EEGRIISISSIIGQ--------------------------AGGFGQ------- 153

Query: 210 KSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSM 258
                    T+Y+ +K  +  +T  LA       ++VN+ CPGF  T M
Sbjct: 154 ---------TNYSAAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEM 193

Length = 247

>gnl|CDD|180462 PRK06198, PRK06198, short chain dehydrogenase; Provisional

 Score = 78.1 bits (193), Expect = 8e-17
 Identities = 40/139 (28%), Positives = 63/139 (45%), Gaps = 2/139 (1%)

Query: 30  ETIAIVTGANKGIGFALVKRLAELGLT-VILTARDVERGQRAVESLSEKGLPVNFFQLDV 88
             +A+VTG  +G+G A+ +  AE G   +++  R+ E+G+     L   G    F Q D+
Sbjct: 6   GKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADL 65

Query: 89  SDPSSIEAFVSWFKSNFAALDILVNNAGVSFND-IYKNTVEHAETVIRTNFYGAKLLTES 147
           SD       V+     F  LD LVN AG++    I   + E  +     N      L + 
Sbjct: 66  SDVEDCRRVVAAADEAFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQE 125

Query: 148 LLPLFRRSPSKSRILNISS 166
            + L RR  ++  I+NI S
Sbjct: 126 AIKLMRRRKAEGTIVNIGS 144

Length = 260

>gnl|CDD|236241 PRK08324, PRK08324, short chain dehydrogenase; Validated

 Score = 80.3 bits (199), Expect = 9e-17
 Identities = 41/138 (29%), Positives = 64/138 (46%), Gaps = 6/138 (4%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKG--LPVNFFQLDVS 89
           +A+VTGA  GIG A  KRLA  G  V+L   D E  + A   L      L V     DV+
Sbjct: 424 VALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPDRALGV---ACDVT 480

Query: 90  DPSSIEAFVSWFKSNFAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESL 148
           D ++++A        F  +DI+V+NAG++ +  I + + E        N  G  L+    
Sbjct: 481 DEAAVQAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREA 540

Query: 149 LPLFRRSPSKSRILNISS 166
           + + +       I+ I+S
Sbjct: 541 VRIMKAQGLGGSIVFIAS 558

Length = 681

>gnl|CDD|183773 PRK12824, PRK12824, acetoacetyl-CoA reductase; Provisional

 Score = 77.5 bits (191), Expect = 1e-16
 Identities = 59/233 (25%), Positives = 88/233 (37%), Gaps = 49/233 (21%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLP---VNFFQLDV 88
           IA+VTGA +GIG A+ + L   G  VI T         A +   E G     V   +LDV
Sbjct: 4   IALVTGAKRGIGSAIARELLNDGYRVIAT--YFSGNDCAKDWFEEYGFTEDQVRLKELDV 61

Query: 89  SDPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKN-TVEHAETVIRTNFYGAKLLTES 147
           +D       ++  +     +DILVNNAG++ + ++K  + +    VI TN      +T+ 
Sbjct: 62  TDTEECAEALAEIEEEEGPVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQP 121

Query: 148 LLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDG 207
           L           RI+NISS  G   +    N                             
Sbjct: 122 LFAAMCEQGY-GRIINISSVNGLKGQFGQTN----------------------------- 151

Query: 208 TWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ 260
                        Y+ +K  +  +T  LA      GI+VN   PG+  T M +
Sbjct: 152 -------------YSAAKAGMIGFTKALASEGARYGITVNCIAPGYIATPMVE 191

Length = 245

>gnl|CDD|182531 PRK10538, PRK10538, malonic semialdehyde reductase; Provisional

 Score = 76.7 bits (189), Expect = 2e-16
 Identities = 48/141 (34%), Positives = 74/141 (52%), Gaps = 8/141 (5%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           I +VTGA  G G  + +R  + G  VI T R  ER Q   + L +        QLDV + 
Sbjct: 2   IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIA---QLDVRNR 58

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSF--NDIYKNTVEHAETVIRTNFYGAKLLTESLL 149
           ++IE  ++   + +  +D+LVNNAG++      +K +VE  ET+I TN  G   +T ++L
Sbjct: 59  AAIEEMLASLPAEWRNIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVL 118

Query: 150 P-LFRRSPSKSRILNISSRLG 169
           P +  R  +   I+NI S  G
Sbjct: 119 PGMVER--NHGHIINIGSTAG 137

Length = 248

>gnl|CDD|181334 PRK08263, PRK08263, short chain dehydrogenase; Provisional

 Score = 77.0 bits (190), Expect = 2e-16
 Identities = 70/249 (28%), Positives = 99/249 (39%), Gaps = 52/249 (20%)

Query: 30  ETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVS 89
           E +  +TGA++G G A  +   E G  V+ TARD        E   ++ LP     LDV+
Sbjct: 3   EKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLP---LALDVT 59

Query: 90  DPSSIEAFVSWFKSNFAALDILVNNAGV-SFNDIYKNTVEHAETVIRTNFYGAKLLTESL 148
           D +++ A V     +F  LDI+VNNAG   F  I + T   A   I TNF+GA  +T+++
Sbjct: 60  DRAAVFAAVETAVEHFGRLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAV 119

Query: 149 LPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGT 208
           LP  R   S   I+ ISS +G +S    P                    G+         
Sbjct: 120 LPYLREQRS-GHIIQISS-IGGISA--FPM------------------SGI--------- 148

Query: 209 WKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPG-----FTQTSMTQGQG 263
                       Y  SK AL   +  LA+     GI V    PG     +  TS  +   
Sbjct: 149 ------------YHASKWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATP 196

Query: 264 SHTADEAAD 272
               D   +
Sbjct: 197 LDAYDTLRE 205

Length = 275

>gnl|CDD|180817 PRK07060, PRK07060, short chain dehydrogenase; Provisional

 Score = 76.3 bits (188), Expect = 3e-16
 Identities = 64/230 (27%), Positives = 86/230 (37%), Gaps = 56/230 (24%)

Query: 34  IVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESL-SEKGLPVNFFQLDVSDPS 92
           +VTGA+ GIG A    LA+ G  V+  AR+      A++ L  E G      +LDV D +
Sbjct: 13  LVTGASSGIGRACAVALAQRGARVVAAARN----AAALDRLAGETGCEP--LRLDVGDDA 66

Query: 93  SIEAFVSWFKSNFAALDILVNNAGV-SFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPL 151
           +I A +    +   A D LVN AG+ S       T E  + V+  N  GA L+   +   
Sbjct: 67  AIRAAL----AAAGAFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARA 122

Query: 152 FRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGL-FLQSVKDGTWK 210
              +     I+N+SS                              VGL    +       
Sbjct: 123 MIAAGRGGSIVNVSS--------------------------QAALVGLPDHLA------- 149

Query: 211 SQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ 260
                     Y  SK AL+A T VL       GI VNS  P  T T M  
Sbjct: 150 ----------YCASKAALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAA 189

Length = 245

>gnl|CDD|187601 cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, classical (c) SDRs

 Score = 76.4 bits (188), Expect = 3e-16
 Identities = 59/271 (21%), Positives = 103/271 (38%), Gaps = 46/271 (16%)

Query: 27  WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNF-FQ 85
           W    +A+VTGA+ GIG A+ + L + G+ V+  AR V++ +         G P  F +Q
Sbjct: 4   WRGR-VALVTGASVGIGAAVARALVQHGMKVVGCARRVDKIEALAAECQSAGYPTLFPYQ 62

Query: 86  LDVSDPSSIEAFVSWFKSNFAALDILVNNAGVSF-NDIYKNTVEHAETVIRTNFYGAKLL 144
            D+S+   I +  S  ++    +D+ +NNAG++    +     E  + +   N     + 
Sbjct: 63  CDLSNEEQILSMFSAIRTQHQGVDVCINNAGLARPEPLLSGKTEGWKEMFDVNVLALSIC 122

Query: 145 T-ESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQS 203
           T E+   +  R+     I+NI+S  G                         R   + +  
Sbjct: 123 TREAYQSMKERNVDDGHIININSMSG------------------------HRVPPVSVFH 158

Query: 204 VKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAK--RYEGEGISVNSYCPGFTQTSMTQG 261
                            YA +K A+ A T  L +  R     I   S  PG  +T     
Sbjct: 159 F----------------YAATKHAVTALTEGLRQELREAKTHIRATSISPGLVETEFAFK 202

Query: 262 QGSHTADEAADVGARLLLLHPQQLPTAKFYI 292
              +  ++AA     +  L P+ +  A  Y+
Sbjct: 203 LHDNDPEKAAATYESIPCLKPEDVANAVLYV 233

Human Mgc4172-like proteins, putative SDRs. These proteins are members of the SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|235712 PRK06138, PRK06138, short chain dehydrogenase; Provisional

 Score = 76.0 bits (187), Expect = 4e-16
 Identities = 65/247 (26%), Positives = 96/247 (38%), Gaps = 46/247 (18%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           +AIVTGA  GIG A  K  A  G  V++  RD E  +R   +++  G      Q DV   
Sbjct: 7   VAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAF-ARQGDVGSA 65

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHA-ETVIRTNFYGAKLLTESLLP 150
            ++EA V +  + +  LD+LVNNAG         T E   + V+R N  G  L  +  +P
Sbjct: 66  EAVEALVDFVAARWGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIP 125

Query: 151 LFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWK 210
           + +R    S I+N +S+L                             G   ++       
Sbjct: 126 IMQRQGGGS-IVNTASQLA--------------------------LAGGRGRAA------ 152

Query: 211 SQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSM-TQGQGSHTADE 269
                     Y  SK A+ + T  +A  +  +GI VN+  PG   T    +    H   E
Sbjct: 153 ----------YVASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRRIFARHADPE 202

Query: 270 AADVGAR 276
           A     R
Sbjct: 203 ALREALR 209

Length = 252

>gnl|CDD|180818 PRK07062, PRK07062, short chain dehydrogenase; Provisional

 Score = 76.2 bits (188), Expect = 4e-16
 Identities = 60/219 (27%), Positives = 93/219 (42%), Gaps = 38/219 (17%)

Query: 29  KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQL-- 86
           +  +A+VTG + GIG A V+ L E G +V +  RD ER   A   L EK           
Sbjct: 7   EGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARC 66

Query: 87  DVSDPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAET-VIRTNFYGAKLLT 145
           DV D + + AF +  ++ F  +D+LVNNAG      + +T + A    +   ++     T
Sbjct: 67  DVLDEADVAAFAAAVEARFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPT 126

Query: 146 ESLLPLFRRSPSKSRILNISS----------------RLGTLSKVRNPNIKSILEDEELS 189
            + LPL R S + S I+ ++S                R G L+ V++          EL+
Sbjct: 127 RAFLPLLRASAAAS-IVCVNSLLALQPEPHMVATSAARAGLLNLVKSLA-------TELA 178

Query: 190 EEQIERFVGLFLQSVKDGTW---------KSQGWPEIWT 219
            + + R   + L  V+ G W           Q W   WT
Sbjct: 179 PKGV-RVNSILLGLVESGQWRRRYEARADPGQSWEA-WT 215

Length = 265

>gnl|CDD|187645 cd08941, 3KS_SDR_c, 3-keto steroid reductase, classical (c) SDRs

 Score = 76.3 bits (188), Expect = 5e-16
 Identities = 64/275 (23%), Positives = 99/275 (36%), Gaps = 78/275 (28%)

Query: 31  TIAIVTGANKGIGFALVKRLAEL-----GLTVILTARDVERGQRAV----ESLSEKGLPV 81
            + +VTGAN G+G A+ +RL         LT+IL  R+++R + A      S  +  +  
Sbjct: 2   KVVLVTGANSGLGLAICERLLAEDDENPELTLILACRNLQRAEAACRALLASHPDARVVF 61

Query: 82  NFFQLDVSDPSSIEAFVSWFKSNFAALDILVNNAG----VSFNDI--------------- 122
           ++  +D+S+  S+ A     K  +  LD L  NAG       + I               
Sbjct: 62  DYVLVDLSNMVSVFAAAKELKKRYPRLDYLYLNAGIMPNPGIDWIGAIKEVLTNPLFAVT 121

Query: 123 ---YKNTVEHAET------------VIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSR 167
              YK   E   +            V +TN +G   L   L PL  RS   S+I+  SS 
Sbjct: 122 NPTYKIQAEGLLSQGDKATEDGLGEVFQTNVFGHYYLIRELEPLLCRSDGGSQIIWTSS- 180

Query: 168 LGTLSKVRNPNIKSI-LEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKL 226
                   N + K   LED +  +            S K               Y V  L
Sbjct: 181 -------LNASPKYFSLEDIQHLKGP------APYSSSK---------------YLVDLL 212

Query: 227 ALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG 261
           +L        +++   G+      PG   T++T G
Sbjct: 213 SLALN-----RKFNKLGVYSYVVHPGICTTNLTYG 242

3-keto steroid reductase (in concert with other enzymes) catalyzes NADP-dependent sterol C-4 demethylation, as part of steroid biosynthesis. 3-keto reductase is a classical SDR, with a well conserved canonical active site tetrad and fairly well conserved characteristic NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 290

>gnl|CDD|236190 PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

 Score = 75.7 bits (187), Expect = 5e-16
 Identities = 40/136 (29%), Positives = 60/136 (44%), Gaps = 11/136 (8%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
              VTGA +GIG+A+     E G  VI    D          L+++  P   F LDVSD 
Sbjct: 10  TVWVTGAAQGIGYAVALAFVEAGAKVI--GFDQAF-------LTQEDYPFATFVLDVSDA 60

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGV-SFNDIYKNTVEHAETVIRTNFYGAKLLTESLLP 150
           +++        +    LD+LVN AG+         + E  +     N  GA  L  +++P
Sbjct: 61  AAVAQVCQRLLAETGPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMP 120

Query: 151 LFRRSPSKSRILNISS 166
            FRR  S + I+ + S
Sbjct: 121 QFRRQRSGA-IVTVGS 135

Length = 252

>gnl|CDD|132250 TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

 Score = 75.7 bits (186), Expect = 6e-16
 Identities = 72/278 (25%), Positives = 111/278 (39%), Gaps = 58/278 (20%)

Query: 29  KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDV 88
           K+  AIVTG   GIG A  +R AE G  V +   + E  ++    +  KG     F  D+
Sbjct: 2   KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDI 61

Query: 89  SDPSSIEAFVSWFKSNFAALDILVNNAGVS-FNDIYKNTVEHAETVIRTNFYGAKLLTES 147
           +D  S++  V+  +     +D+LVNNAG   F    K      E +I  N  GA  +  +
Sbjct: 62  TDRDSVDTAVAAAEQALGPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHA 121

Query: 148 LLP-LFRRSPSKSRILNISS---RLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQS 203
           +LP +  R     RI+NI+S   R+G+                  S E +          
Sbjct: 122 VLPGMVER--GAGRIVNIASDAARVGS------------------SGEAV---------- 151

Query: 204 VKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG-- 261
                            YA  K  L A++  +A+ +   GI+VN  CPG T T++     
Sbjct: 152 -----------------YAACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTALLDDIC 194

Query: 262 QGSHTADEAADVGARLLLL----HPQQLPTAKFYIGLD 295
            G+   ++  +   R + L     P  LP A  +   D
Sbjct: 195 GGAENPEKLREAFTRAIPLGRLGQPDDLPGAILFFSSD 232

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. Length = 250

>gnl|CDD|235545 PRK05650, PRK05650, short chain dehydrogenase; Provisional

 Score = 75.8 bits (187), Expect = 6e-16
 Identities = 46/140 (32%), Positives = 71/140 (50%), Gaps = 10/140 (7%)

Query: 35  VTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQ-LDVSDPSS 93
           +TGA  G+G A+  R A  G  + L   + E G+  ++ L E G    F+Q  DV D S 
Sbjct: 5   ITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAG-GDGFYQRCDVRDYSQ 63

Query: 94  IEAFVSWFKSNFAALDILVNNAGV----SFNDIYKNTVEHAETVIRTNFYGAKLLTESLL 149
           + A     +  +  +D++VNNAGV     F ++   ++E  +  I  N  G     ++ L
Sbjct: 64  LTALAQACEEKWGGIDVIVNNAGVASGGFFEEL---SLEDWDWQIAINLMGVVKGCKAFL 120

Query: 150 PLFRRSPSKSRILNISSRLG 169
           PLF+R  S  RI+NI+S  G
Sbjct: 121 PLFKRQKS-GRIVNIASMAG 139

Length = 270

>gnl|CDD|236209 PRK08265, PRK08265, short chain dehydrogenase; Provisional

 Score = 75.4 bits (186), Expect = 8e-16
 Identities = 58/245 (23%), Positives = 90/245 (36%), Gaps = 51/245 (20%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           +AIVTG    IG A+ + L   G  V +   D + G     SL E+     F   D++D 
Sbjct: 8   VAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERAR---FIATDITDD 64

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPL 151
           ++IE  V+   + F  +DILVN A    +D   ++       +  N   A +L ++  P 
Sbjct: 65  AAIERAVATVVARFGRVDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPH 124

Query: 152 FRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKS 211
             R      I+N +S     +K                               + G W  
Sbjct: 125 LAR--GGGAIVNFTS---ISAKF-----------------------------AQTGRWL- 149

Query: 212 QGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQT----SMTQGQGSHTA 267
                    Y  SK A+   T  +A     +GI VNS  PG+T +     ++ G  +   
Sbjct: 150 ---------YPASKAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDELSGGDRAKAD 200

Query: 268 DEAAD 272
             AA 
Sbjct: 201 RVAAP 205

Length = 261

>gnl|CDD|180723 PRK06841, PRK06841, short chain dehydrogenase; Provisional

 Score = 75.1 bits (185), Expect = 9e-16
 Identities = 59/236 (25%), Positives = 95/236 (40%), Gaps = 52/236 (22%)

Query: 22  SSTKWWSK-----ETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSE 76
           + TK +         +A+VTG   GIG A+ +  A  G  V L  R  +  + A + L  
Sbjct: 2   TDTKQFDLAFDLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQLLGG 61

Query: 77  KGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKN-TVEHAETVIR 135
                     DVSD  S+EA V+   S F  +DILVN+AGV+     ++ + E  +  I 
Sbjct: 62  NAKG---LVCDVSDSQSVEAAVAAVISAFGRIDILVNSAGVALLAPAEDVSEEDWDKTID 118

Query: 136 TNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIER 195
            N  G+ L+ +++      +    +I+N++S+ G ++                    +ER
Sbjct: 119 INLKGSFLMAQAVGRHMIAAGG-GKIVNLASQAGVVA--------------------LER 157

Query: 196 FVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCP 251
            V                       Y  SK  +   T VLA  +   GI+VN+  P
Sbjct: 158 HVA----------------------YCASKAGVVGMTKVLALEWGPYGITVNAISP 191

Length = 255

>gnl|CDD|235628 PRK05855, PRK05855, short chain dehydrogenase; Validated

 Score = 76.6 bits (189), Expect = 1e-15
 Identities = 35/114 (30%), Positives = 55/114 (48%), Gaps = 7/114 (6%)

Query: 31  TIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSD 90
            + +VTGA  GIG       A  G  V+ +  D    +R  E +   G   + +++DVSD
Sbjct: 316 KLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSD 375

Query: 91  PSSIEAFVSWFKSNFAALDILVNNAGV----SFNDIYKNTVEHAETVIRTNFYG 140
             ++EAF  W ++     DI+VNNAG+     F D    + E  + V+  N +G
Sbjct: 376 ADAMEAFAEWVRAEHGVPDIVVNNAGIGMAGGFLD---TSAEDWDRVLDVNLWG 426

Length = 582

>gnl|CDD|187599 cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-like, classical (c) SDRs

 Score = 74.1 bits (182), Expect = 2e-15
 Identities = 62/235 (26%), Positives = 98/235 (41%), Gaps = 48/235 (20%)

Query: 29  KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLP-VNFFQLD 87
            + I +VTGA+ GIG       A  G TVIL  R+ E+ ++  + ++E+G     +F LD
Sbjct: 3   NDRIILVTGASDGIGREAALTYARYGATVILLGRNEEKLRQVADHINEEGGRQPQWFILD 62

Query: 88  VSDPSS--IEAFVSWFKSNFAALDILVNNAGVSFN--DIYKNTVEHAETVIRTNFYGAKL 143
           +   +S   +        N+  LD +++NAG+  +   + +   +  + V + N     +
Sbjct: 63  LLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPLSEQNPQVWQDVXQVNVNATFM 122

Query: 144 LTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQS 203
           LT++LLPL  +S + S +   SS                              VG     
Sbjct: 123 LTQALLPLLLKSDAGSLVFTSSS------------------------------VG----- 147

Query: 204 VKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSM 258
                   QG    W  YAVSK A      VLA  Y+   + VN   PG T+T+M
Sbjct: 148 -------RQGRAN-WGAYAVSKFATEGLXQVLADEYQQRNLRVNCINPGGTRTAM 194

Escherichia coli K-12 YCIK and related proteins have a canonical classical SDR nucleotide-binding motif and active site tetrad. They are predicted oxoacyl-(acyl carrier protein/ACP) reductases. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 236

>gnl|CDD|187618 cd05360, SDR_c3, classical (c) SDR, subgroup 3

 Score = 74.0 bits (182), Expect = 2e-15
 Identities = 44/137 (32%), Positives = 59/137 (43%), Gaps = 2/137 (1%)

Query: 34  IVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSS 93
           ++TGA+ GIG A     AE G  V+L AR  E        + E G        DV+D + 
Sbjct: 4   VITGASSGIGRATALAFAERGAKVVLAARSAEALHELAREVRELGGEAIAVVADVADAAQ 63

Query: 94  IEAFVSWFKSNFAALDILVNNAGVS-FNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLF 152
           +E         F  +D  VNNAGV+ F      T E    V   N+ G    T + LP  
Sbjct: 64  VERAADTAVERFGRIDTWVNNAGVAVFGRFEDVTPEEFRRVFDVNYLGHVYGTLAALPHL 123

Query: 153 RRSPSKSRILNISSRLG 169
           RR      ++N+ S LG
Sbjct: 124 RRR-GGGALINVGSLLG 139

These proteins are members of the classical SDR family, with a canonical active site triad (and also active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 233

>gnl|CDD|235627 PRK05854, PRK05854, short chain dehydrogenase; Provisional

 Score = 74.7 bits (184), Expect = 2e-15
 Identities = 42/123 (34%), Positives = 63/123 (51%), Gaps = 2/123 (1%)

Query: 33  AIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEK--GLPVNFFQLDVSD 90
           A+VTGA+ G+G  L +RLA  G  VIL  R+  +G+ AV ++        ++   LD+S 
Sbjct: 17  AVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSS 76

Query: 91  PSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLP 150
            +S+ A     ++    + +L+NNAGV      + T +  E    TN  G   LT  LLP
Sbjct: 77  LASVAALGEQLRAEGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLP 136

Query: 151 LFR 153
           L R
Sbjct: 137 LLR 139

Length = 313

>gnl|CDD|187668 cd09808, DHRS-12_like_SDR_c-like, human dehydrogenase/reductase SDR family member (DHRS)-12/FLJ13639-like, classical (c)-like SDRs

 Score = 73.4 bits (180), Expect = 3e-15
 Identities = 49/150 (32%), Positives = 75/150 (50%), Gaps = 4/150 (2%)

Query: 34  IVTGANKGIGFALVKRLAELGLTVILTARDVERGQRA-VESLSEKGLPVNFFQ-LDVSDP 91
           ++TGAN GIG A    +A+ G TV +  R+  R + A  E  +E G    F   +D+SDP
Sbjct: 5   LITGANSGIGKAAALAIAKRGGTVHMVCRNQTRAEEARKEIETESGNQNIFLHIVDMSDP 64

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPL 151
             +  FV  FK     L +L+NNAG   N   + T +  E    TN  G  +LT  L+P+
Sbjct: 65  KQVWEFVEEFKEEGKKLHVLINNAGCMVNK-RELTEDGLEKNFATNTLGTYILTTHLIPV 123

Query: 152 FRRSPSKSRILNISSRLGTLSKVRNPNIKS 181
             +     R++ +SS    + K+   N++S
Sbjct: 124 LEKEED-PRVITVSSGGMLVQKLNTNNLQS 152

Classical SDR-like subgroup containing human DHRS-12/FLJ13639, the 36K protein of zebrafish CNS myelin, and related proteins. DHRS-12/FLJ13639 is expressed in neurons and oligodendrocytes in the human cerebral cortex. Proteins in this subgroup share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 255

>gnl|CDD|184025 PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenase; Provisional

 Score = 73.4 bits (180), Expect = 4e-15
 Identities = 51/253 (20%), Positives = 91/253 (35%), Gaps = 47/253 (18%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
            A+VTGA  GIG  +   LA  G  V +   + +      + +++ G       +DV++ 
Sbjct: 9   TAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNE 68

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSF-NDIYKNTVEHAETVIRTNFYGAKLLTESLLP 150
            ++ A +      F ++DILV+NAG+   N I   +    + +   +  GA L T++ L 
Sbjct: 69  DAVNAGIDKVAERFGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALK 128

Query: 151 LFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWK 210
              +      ++ + S                          +       L+S       
Sbjct: 129 HMYKDDRGGVVIYMGS--------------------------VHSHEASPLKSA------ 156

Query: 211 SQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTADEA 270
                     Y  +K  L     VLAK      +  +  CPGF +T +   Q    A E 
Sbjct: 157 ----------YVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKEL 206

Query: 271 A----DVGARLLL 279
                +V  +++L
Sbjct: 207 GISEEEVVKKVML 219

Length = 262

>gnl|CDD|181297 PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 73.1 bits (180), Expect = 4e-15
 Identities = 64/244 (26%), Positives = 100/244 (40%), Gaps = 59/244 (24%)

Query: 29  KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDV 88
           K+ + ++TG  +G+G A+ + LA+ G  + L   + E+ + AV      G  V  +  +V
Sbjct: 4   KDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANV 63

Query: 89  SDPSSIEAFVSWFKSNFAALDILVNNAG-------VSFND---IYKNTVEHAETVIRTNF 138
           +D   +EA  +    +F  L+ L+NNAG       V   D     K ++E  ++VI  N 
Sbjct: 64  TDEEDVEATFAQIAEDFGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNL 123

Query: 139 YGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVG 198
            G  L           S SK  I+NISS    +++  N                    +G
Sbjct: 124 TGVFLCGREAAAKMIESGSKGVIINISS----IARAGN--------------------MG 159

Query: 199 LFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAK---RYEGEGISVNSYCPGFTQ 255
              Q                T+Y+ SK  + A T+  AK   RY   GI V +  PG  +
Sbjct: 160 ---Q----------------TNYSASKAGVAAMTVTWAKELARY---GIRVAAIAPGVIE 197

Query: 256 TSMT 259
           T MT
Sbjct: 198 TEMT 201

Length = 253

>gnl|CDD|183718 PRK12746, PRK12746, short chain dehydrogenase; Provisional

 Score = 73.1 bits (179), Expect = 4e-15
 Identities = 65/238 (27%), Positives = 100/238 (42%), Gaps = 59/238 (24%)

Query: 32  IAIVTGANKGIGFALVKRLAELG-LTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSD 90
           +A+VTGA++GIG A+  RLA  G L  I   R+ +     +  +   G      + D++ 
Sbjct: 8   VALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNS 67

Query: 91  PSSIEAFVSWFKSNF------AALDILVNNAGVSFNDIYKNTVEHA-ETVIRTNFYGAKL 143
              ++  V   K+        + +DILVNNAG+      +NT E   + ++  N      
Sbjct: 68  IDGVKKLVEQLKNELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFF 127

Query: 144 LTESLLPLFRRSPSKSRILNISS---RLGTLSKVRNPNIKSILEDEELSEEQIERFVGLF 200
           L +  LPL R   ++ R++NISS   RLG                              F
Sbjct: 128 LIQQTLPLLR---AEGRVINISSAEVRLG------------------------------F 154

Query: 201 LQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSM 258
             S+                Y +SK ALN  T+ LAK     GI+VN+  PG+T+T +
Sbjct: 155 TGSIA---------------YGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDI 197

Length = 254

>gnl|CDD|187639 cd08934, CAD_SDR_c, clavulanic acid dehydrogenase (CAD), classical (c) SDR

 Score = 72.6 bits (178), Expect = 5e-15
 Identities = 51/141 (36%), Positives = 71/141 (50%), Gaps = 10/141 (7%)

Query: 31  TIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSD 90
            +A+VTGA+ GIG A  + LA  G  V + AR V+R +   + L  +G      +LDV+D
Sbjct: 4   KVALVTGASSGIGEATARALAAEGAAVAIAARRVDRLEALADELEAEGGKALVLELDVTD 63

Query: 91  PSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAET-----VIRTNFYGAKLLT 145
              ++A V         LDILVNNAG+    +    VE A+T     +I TN  G    T
Sbjct: 64  EQQVDAAVERTVEALGRLDILVNNAGI----MLLGPVEDADTTDWTRMIDTNLLGLMYTT 119

Query: 146 ESLLPLFRRSPSKSRILNISS 166
            + LP      +K  I+NISS
Sbjct: 120 HAALPH-HLLRNKGTIVNISS 139

CAD catalyzes the NADP-dependent reduction of clavulanate-9-aldehyde to clavulanic acid, a beta-lactamase inhibitor. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|235736 PRK06196, PRK06196, oxidoreductase; Provisional

 Score = 73.6 bits (181), Expect = 5e-15
 Identities = 43/143 (30%), Positives = 64/143 (44%), Gaps = 6/143 (4%)

Query: 33  AIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPS 92
           AIVTG   G+G    + LA+ G  VI+ AR  +  + A+  +      V    LD++D  
Sbjct: 29  AIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDG----VEVVMLDLADLE 84

Query: 93  SIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLF 152
           S+ AF   F  +   +DIL+NNAGV      +   +  E    TN  G   L   L P  
Sbjct: 85  SVRAFAERFLDSGRRIDILINNAGVMACPETR-VGDGWEAQFATNHLGHFALVNLLWPAL 143

Query: 153 RRSPSKSRILNISSRLGTLSKVR 175
                 +R++ +SS     S +R
Sbjct: 144 AAGAG-ARVVALSSAGHRRSPIR 165

Length = 315

>gnl|CDD|180371 PRK06057, PRK06057, short chain dehydrogenase; Provisional

 Score = 72.8 bits (179), Expect = 6e-15
 Identities = 61/232 (26%), Positives = 94/232 (40%), Gaps = 50/232 (21%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           +A++TG   GIG A  +RLA  G TV++   D E G+ A + +   GL   F   DV+D 
Sbjct: 9   VAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVG--GL---FVPTDVTDE 63

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSFND---IYKNTVEHAETVIRTNFYGAKLLTESL 148
            ++ A        + ++DI  NNAG+S  +   I    ++  + V   N     L  ++ 
Sbjct: 64  DAVNALFDTAAETYGSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAA 123

Query: 149 LPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGT 208
           LP   R   K  I+N +S                             FV +       G+
Sbjct: 124 LPHMVRQ-GKGSIINTAS-----------------------------FVAVM------GS 147

Query: 209 WKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ 260
             SQ        Y  SK  + A +  L  ++  +GI VN+ CPG   T + Q
Sbjct: 148 ATSQ------ISYTASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQ 193

Length = 255

>gnl|CDD|181585 PRK08936, PRK08936, glucose-1-dehydrogenase; Provisional

 Score = 72.8 bits (179), Expect = 6e-15
 Identities = 57/231 (24%), Positives = 91/231 (39%), Gaps = 46/231 (19%)

Query: 29  KETIAIVTGANKGIGFALVKRLAELGLTVILTAR-DVERGQRAVESLSEKGLPVNFFQLD 87
           +  + ++TG + G+G A+  R  +    V++  R D E      E + + G      + D
Sbjct: 6   EGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGD 65

Query: 88  VSDPSSIEAFVSWFKSNFAALDILVNNAGVSFNDI--YKNTVEHAETVIRTNFYGAKLLT 145
           V+  S +   +      F  LD+++NNAG+  N +  ++ ++E    VI TN  GA L +
Sbjct: 66  VTVESDVVNLIQTAVKEFGTLDVMINNAGIE-NAVPSHEMSLEDWNKVINTNLTGAFLGS 124

Query: 146 ESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVK 205
              +  F     K  I+N+SS                        EQI            
Sbjct: 125 REAIKYFVEHDIKGNIINMSS----------------------VHEQIP----------- 151

Query: 206 DGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQT 256
                   WP ++  YA SK  +   T  LA  Y  +GI VN+  PG   T
Sbjct: 152 --------WP-LFVHYAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINT 193

Length = 261

>gnl|CDD|188170 TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogenase

 Score = 72.5 bits (178), Expect = 6e-15
 Identities = 64/235 (27%), Positives = 98/235 (41%), Gaps = 55/235 (23%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTAR-DVERGQRAVESLSEKGLPVNFFQLDVSD 90
           +A+VTGAN G+G  +   LAE G  ++   R +    Q+ VE+L  + L       D+SD
Sbjct: 7   VALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEALGRRFL---SLTADLSD 63

Query: 91  PSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKN-TVEHAET----VIRTNFYGAKLLT 145
             +I+A V      F  +DILVNNAG+    I +    E +E     V+  N      LT
Sbjct: 64  IEAIKALVDSAVEEFGHIDILVNNAGI----IRRADAEEFSEKDWDDVMNVNLKSVFFLT 119

Query: 146 ESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVK 205
           ++    F +     +I+NI+S L     +R P+                           
Sbjct: 120 QAAAKHFLKQGRGGKIINIASMLSFQGGIRVPS--------------------------- 152

Query: 206 DGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ 260
                          Y  SK A+   T +LA  +  +GI+VN+  PG+  T+ TQ
Sbjct: 153 ---------------YTASKHAVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQ 192

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 248

>gnl|CDD|187665 cd09805, type2_17beta_HSD-like_SDR_c, human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs

 Score = 72.7 bits (179), Expect = 8e-15
 Identities = 42/144 (29%), Positives = 67/144 (46%), Gaps = 9/144 (6%)

Query: 34  IVTGANKGIGFALVKRLAELGLTVILTARDVER-GQRAVESLSEKGLPVNFFQLDVSDPS 92
           ++TG + G G  L K+L  LG TV+         G + +  +    L     QLDV+ P 
Sbjct: 4   LITGCDSGFGNLLAKKLDSLGFTVLAGCLTKNGPGAKELRRVCSDRLRT--LQLDVTKPE 61

Query: 93  SIEAFVSWFKSNFAALDI--LVNNAGVS--FNDIYKNTVEHAETVIRTNFYGAKLLTESL 148
            I+    W K +     +  LVNNAG+     D     ++     +  N +G   +T++ 
Sbjct: 62  QIKRAAQWVKEHVGEKGLWGLVNNAGILGFGGDEELLPMDDYRKCMEVNLFGTVEVTKAF 121

Query: 149 LPLFRRSPSKSRILNISSRLGTLS 172
           LPL RR  +K R++N+SS  G + 
Sbjct: 122 LPLLRR--AKGRVVNVSSMGGRVP 143

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical-SDR subgroup includes the human proteins: type 2 17beta-HSD, type 6 17beta-HSD, type 2 11beta-HSD, dehydrogenase/reductase SDR family member 9, short-chain dehydrogenase/reductase family 9C member 7, 3-hydroxybutyrate dehydrogenase type 1, and retinol dehydrogenase 5. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 281

>gnl|CDD|235933 PRK07097, PRK07097, gluconate 5-dehydrogenase; Provisional

 Score = 72.4 bits (178), Expect = 1e-14
 Identities = 43/147 (29%), Positives = 76/147 (51%), Gaps = 14/147 (9%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           IA++TGA+ GIGFA+ K  A+ G T++    + E   + + +  E G+  + +  DV+D 
Sbjct: 12  IALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDE 71

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKN------TVEHAETVIRTNFYGAKLLT 145
             ++A VS  +     +DILVNNAG     I K       + E    VI  +     +++
Sbjct: 72  DGVQAMVSQIEKEVGVIDILVNNAG-----IIKRIPMLEMSAEDFRQVIDIDLNAPFIVS 126

Query: 146 ESLLP-LFRRSPSKSRILNISSRLGTL 171
           ++++P + ++   K  I+NI S +  L
Sbjct: 127 KAVIPSMIKKGHGK--IINICSMMSEL 151

Length = 265

>gnl|CDD|187614 cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxysteroid dehydrogenases (17beta-HSDs) types -1, -3, and -12, -like, classical (c) SDRs

 Score = 71.9 bits (177), Expect = 1e-14
 Identities = 59/242 (24%), Positives = 91/242 (37%), Gaps = 60/242 (24%)

Query: 33  AIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEK-GLPVNFFQLDVSDP 91
           A+VTGA  GIG A  + LA+ G  VIL +R  E+     + + EK G+       D S  
Sbjct: 4   AVVTGATDGIGKAYAEELAKRGFNVILISRTQEKLDAVAKEIEEKYGVETKTIAADFSAG 63

Query: 92  SSIEAFVSWFKSNFAAL-----DILVNNAGVSFNDIYKNT---VEHAETVIRTNFYGAKL 143
             I      ++     L      ILVNN G+S +          +  + +I  N      
Sbjct: 64  DDI------YERIEKELEGLDIGILVNNVGISHSIPEYFLETPEDELQDIINVNVMATLK 117

Query: 144 LTESLLP-LFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQ 202
           +T  +LP + +R   K  I+NISS  G +                               
Sbjct: 118 MTRLILPGMVKR--KKGAIVNISSFAGLIP------------------------------ 145

Query: 203 SVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ 262
                       P +   Y+ SK  L+ ++  L + Y+ +GI V S  P    T M++ +
Sbjct: 146 -----------TP-LLATYSASKAFLDFFSRALYEEYKSQGIDVQSLLPYLVATKMSKIR 193

Query: 263 GS 264
            S
Sbjct: 194 KS 195

This subgroup includes various 17-beta-hydroxysteroid dehydrogenases and 3-ketoacyl-CoA reductase, these are members of the SDR family, and contain the canonical active site tetrad and glycine-rich NAD-binding motif of the classical SDRs. 3-ketoacyl-CoA reductase (KAR, aka 17beta-HSD type 12, encoded by HSD17B12) acts in fatty acid elongation; 17beta- hydroxysteroid dehydrogenases are isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. 17beta-estradiol dehydrogenase (aka 17beta-HSD type 1, encoded by HSD17B1) converts estrone to estradiol. Estradiol is the predominant female sex hormone. 17beta-HSD type 3 (aka testosterone 17-beta-dehydrogenase 3, encoded by HSD17B3) catalyses the reduction of androstenedione to testosterone, it also accepts estrogens as substrates. This subgroup also contains a putative steroid dehydrogenase let-767 from Caenorhabditis elegans, mutation in which results in hypersensitivity to cholesterol limitation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|171820 PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

 Score = 71.9 bits (176), Expect = 1e-14
 Identities = 58/229 (25%), Positives = 97/229 (42%), Gaps = 49/229 (21%)

Query: 33  AIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPS 92
           A+VTGA+ GIG  + + L   G  V L    VE+ +     L E+   V  F  ++SD  
Sbjct: 9   ALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGER---VKIFPANLSDRD 65

Query: 93  SIEAFVSWFKSNFAALDILVNNAGVSFNDIY-KNTVEHAETVIRTNFYGAKLLTESLL-P 150
            ++A     +++   +DILVNNAG++ + ++ + + E  ++V+  N      LT  L  P
Sbjct: 66  EVKALGQKAEADLEGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHP 125

Query: 151 LFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWK 210
           + RR     RI+NI+S +G      NP                                 
Sbjct: 126 MMRR--RYGRIINITSVVGVTG---NPG-------------------------------- 148

Query: 211 SQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMT 259
                    +Y  SK  +  ++  LA+      ++VN   PGF +++MT
Sbjct: 149 -------QANYCASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESAMT 190

Length = 245

>gnl|CDD|180458 PRK06194, PRK06194, hypothetical protein; Provisional

 Score = 72.0 bits (177), Expect = 1e-14
 Identities = 46/149 (30%), Positives = 77/149 (51%), Gaps = 10/149 (6%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERG--QRAVESLSEKGLPVNFFQLDVS 89
           +A++TGA  G G A  +  A LG+ ++L   DV++    RAV  L  +G  V   + DVS
Sbjct: 8   VAVITGAASGFGLAFARIGAALGMKLVLA--DVQQDALDRAVAELRAQGAEVLGVRTDVS 65

Query: 90  DPSSIEAFVSWFKSNFAALDILVNNAGV-SFNDIYKNTVEHAETVIRTN----FYGAKLL 144
           D + +EA        F A+ +L NNAGV +   +++N++   E V+  N     +G +  
Sbjct: 66  DAAQVEALADAALERFGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAF 125

Query: 145 TESLLPLFRRSPS-KSRILNISSRLGTLS 172
           T  +L    + P+ +  I+N +S  G L+
Sbjct: 126 TPLMLAAAEKDPAYEGHIVNTASMAGLLA 154

Length = 287

>gnl|CDD|237220 PRK12828, PRK12828, short chain dehydrogenase; Provisional

 Score = 71.4 bits (175), Expect = 1e-14
 Identities = 47/229 (20%), Positives = 71/229 (31%), Gaps = 46/229 (20%)

Query: 31  TIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSD 90
            +  +TG   G+G A    LA  G  V L  R      + +  +    L +    +D+ D
Sbjct: 8   KVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIG--GIDLVD 65

Query: 91  PSSIEAFVSWFKSNFAALDILVNNAGV-SFNDIYKNTVEHAETVIRTNFYGAKLLTESLL 149
           P +    V      F  LD LVN AG   +  I     +  + +   N       +++ L
Sbjct: 66  PQAARRAVDEVNRQFGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAAL 125

Query: 150 PLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTW 209
           P    S    RI+NI +                                     +K G  
Sbjct: 126 PALTASGG-GRIVNIGAGAA----------------------------------LKAGPG 150

Query: 210 KSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSM 258
                      YA +K  +   T  LA      GI+VN+  P    T  
Sbjct: 151 --------MGAYAAAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPP 191

Length = 239

>gnl|CDD|236116 PRK07856, PRK07856, short chain dehydrogenase; Provisional

 Score = 71.5 bits (176), Expect = 2e-14
 Identities = 39/136 (28%), Positives = 62/136 (45%), Gaps = 9/136 (6%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           + +VTG  +GIG  + +     G TV++  R      RA E++   G P  F   DV DP
Sbjct: 8   VVLVTGGTRGIGAGIARAFLAAGATVVVCGR------RAPETVD--GRPAEFHAADVRDP 59

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVS-FNDIYKNTVEHAETVIRTNFYGAKLLTESLLP 150
             + A V         LD+LVNNAG S +    + +    E ++  N     L+ ++   
Sbjct: 60  DQVAALVDAIVERHGRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANA 119

Query: 151 LFRRSPSKSRILNISS 166
           + ++ P    I+NI S
Sbjct: 120 VMQQQPGGGSIVNIGS 135

Length = 252

>gnl|CDD|180802 PRK07035, PRK07035, short chain dehydrogenase; Provisional

 Score = 71.2 bits (175), Expect = 2e-14
 Identities = 60/238 (25%), Positives = 95/238 (39%), Gaps = 67/238 (28%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           IA+VTGA++GIG A+ K LA+ G  VI+++R ++  Q   +++   G         + + 
Sbjct: 10  IALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEM 69

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVS--FNDI-------YKNTVEHAETVIRTNFY--- 139
             I+A  +  +     LDILVNNA  +  F  I       ++ TV   +  IR  F+   
Sbjct: 70  EQIDALFAHIRERHGRLDILVNNAAANPYFGHILDTDLGAFQKTV---DVNIRGYFFMSV 126

Query: 140 -GAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVG 198
              KL+ E              I+N++S                                
Sbjct: 127 EAGKLMKEQ---------GGGSIVNVAS-------------------------------- 145

Query: 199 LFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQT 256
             +  V  G +  QG       Y+++K A+ + T   AK     GI VN+  PG T T
Sbjct: 146 --VNGVSPGDF--QGI------YSITKAAVISMTKAFAKECAPFGIRVNALLPGLTDT 193

Length = 252

>gnl|CDD|237099 PRK12428, PRK12428, 3-alpha-hydroxysteroid dehydrogenase; Provisional

 Score = 71.2 bits (175), Expect = 2e-14
 Identities = 63/218 (28%), Positives = 83/218 (38%), Gaps = 48/218 (22%)

Query: 46  LVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF 105
             + L  LG  VI    D       ++          F Q D+ DP+SI+A V       
Sbjct: 1   TARLLRFLGARVI--GVDRREPGMTLDG---------FIQADLGDPASIDAAV------- 42

Query: 106 AAL----DILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRI 161
           AAL    D L N AGV        T    E V R NF G + LTE+LLP   R      I
Sbjct: 43  AALPGRIDALFNIAGVP------GTAP-VELVARVNFLGLRHLTEALLP---RMAPGGAI 92

Query: 162 LNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDY 221
           +N++S  G     R    K++       E                  W +     + T Y
Sbjct: 93  VNVASLAGAEWPQRLELHKALAATASFDEGA---------------AWLAAHPVALATGY 137

Query: 222 AVSKLALNAYTMVLAKRYEGE-GISVNSYCPGFTQTSM 258
            +SK AL  +TM  A+ + G  GI VN   PG   T +
Sbjct: 138 QLSKEALILWTMRQAQPWFGARGIRVNCVAPGPVFTPI 175

Length = 241

>gnl|CDD|235794 PRK06398, PRK06398, aldose dehydrogenase; Validated

 Score = 71.0 bits (174), Expect = 2e-14
 Identities = 43/139 (30%), Positives = 71/139 (51%), Gaps = 13/139 (9%)

Query: 29  KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDV 88
           K+ +AIVTG ++GIG A+V RL E G  VI      E     V+          +F++DV
Sbjct: 5   KDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIK-EPSYNDVD----------YFKVDV 53

Query: 89  SDPSSIEAFVSWFKSNFAALDILVNNAGV-SFNDIYKNTVEHAETVIRTNFYGAKLLTES 147
           S+   +   + +  S +  +DILVNNAG+ S+  I+    +  + +I  N  G  L+++ 
Sbjct: 54  SNKEQVIKGIDYVISKYGRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKY 113

Query: 148 LLPLFRRSPSKSRILNISS 166
            +P   +      I+NI+S
Sbjct: 114 TIPYMLKQDKGV-IINIAS 131

Length = 258

>gnl|CDD|181298 PRK08219, PRK08219, short chain dehydrogenase; Provisional

 Score = 70.0 bits (172), Expect = 3e-14
 Identities = 63/231 (27%), Positives = 91/231 (39%), Gaps = 55/231 (23%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
            A++TGA++GIG A+ + LA    T++L  R  ER       L         F +D++DP
Sbjct: 5   TALITGASRGIGAAIARELAP-THTLLLGGRPAERLDELAAELPG----ATPFPVDLTDP 59

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSFND-IYKNTVEHAETVIRTNFYGAKLLTESLLP 150
            +I A V         LD+LV+NAGV+    + ++TV+     +  N      LT  LLP
Sbjct: 60  EAIAAAV----EQLGRLDVLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLP 115

Query: 151 LFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWK 210
             R   +   ++ I+S  G  +   NP                                 
Sbjct: 116 ALRA--AHGHVVFINSGAGLRA---NPG-------------------------------- 138

Query: 211 SQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG 261
                  W  YA SK AL A    L +  E   + V S  PG T T M +G
Sbjct: 139 -------WGSYAASKFALRALADAL-REEEPGNVRVTSVHPGRTDTDMQRG 181

Length = 227

>gnl|CDD|180576 PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 70.6 bits (173), Expect = 3e-14
 Identities = 57/235 (24%), Positives = 89/235 (37%), Gaps = 50/235 (21%)

Query: 29  KETIAIVTGANKGIGFALVKRLAELGLTV-ILTARDVERGQRAVESLSEKGLPVNFFQLD 87
           K  +A++TG  +GIG A+ +     G  V +L        +   + L EKG  V   + D
Sbjct: 6   KGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSA----ENEAKELREKG--VFTIKCD 59

Query: 88  VSDPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKN-TVEHAETVIRTNFYGAKLLTE 146
           V +   ++      +  F  +D+LVNNAG+ +   ++    E    +I+ N  GA   T 
Sbjct: 60  VGNRDQVKKSKEVVEKEFGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTY 119

Query: 147 SLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKD 206
             LPL + S     I+NI+S  G  +                                  
Sbjct: 120 EFLPLLKLS-KNGAIVNIASNAGIGTAAEGT----------------------------- 149

Query: 207 GTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG 261
                       T YA++K  +   T  LA      GI VN+  PG+ +T MT  
Sbjct: 150 ------------TFYAITKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLS 192

Length = 255

>gnl|CDD|181044 PRK07577, PRK07577, short chain dehydrogenase; Provisional

 Score = 70.1 bits (172), Expect = 3e-14
 Identities = 60/242 (24%), Positives = 84/242 (34%), Gaps = 64/242 (26%)

Query: 29  KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDV 88
                +VTGA KGIG AL  RLA LG  VI  AR            +    P   F  D+
Sbjct: 2   SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARS-----------AIDDFPGELFACDL 50

Query: 89  SDPSSIEAFVSWFKSNFAALDILVNNAG-VSFNDIYKNTVEHAETVIRTNFYGAKLLTES 147
           +D     A ++        +D +VNN G      + K  +   + V   N   A  +T++
Sbjct: 51  ADIEQTAATLAQINEIH-PVDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQA 109

Query: 148 LLPLFRRSPSKSRILNISSR--LGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVK 205
            L   +      RI+NI SR   G L +                                
Sbjct: 110 FLEGMKLREQ-GRIVNICSRAIFGALDR-------------------------------- 136

Query: 206 DGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSM---TQGQ 262
                        T Y+ +K AL   T   A      GI+VN+  PG  +T +   T+  
Sbjct: 137 -------------TSYSAAKSALVGCTRTWALELAEYGITVNAVAPGPIETELFRQTRPV 183

Query: 263 GS 264
           GS
Sbjct: 184 GS 185

Length = 234

>gnl|CDD|181508 PRK08628, PRK08628, short chain dehydrogenase; Provisional

 Score = 70.4 bits (173), Expect = 4e-14
 Identities = 41/139 (29%), Positives = 61/139 (43%), Gaps = 3/139 (2%)

Query: 29  KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDV 88
           K+ + IVTG   GIG A+  RLAE G   ++  R         E L        F Q+D+
Sbjct: 6   KDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRS-APDDEFAEELRALQPRAEFVQVDL 64

Query: 89  SDPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESL 148
           +D +     V    + F  +D LVNNAGV+     +   E     +  N     ++    
Sbjct: 65  TDDAQCRDAVEQTVAKFGRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYC 124

Query: 149 LPLFRRSPSKSRILNISSR 167
           LP  +   S+  I+NISS+
Sbjct: 125 LPHLKA--SRGAIVNISSK 141

Length = 258

>gnl|CDD|187638 cd08933, RDH_SDR_c, retinal dehydrogenase-like, classical (c) SDR

 Score = 70.3 bits (172), Expect = 5e-14
 Identities = 59/248 (23%), Positives = 93/248 (37%), Gaps = 47/248 (18%)

Query: 29  KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQL-D 87
            + + IVTG ++GIG  +V+   E G  V+  AR    GQ     L+  G     F   D
Sbjct: 8   ADKVVIVTGGSRGIGRGIVRAFVENGAKVVFCARGEAAGQALESELNRAGPGSCKFVPCD 67

Query: 88  VSDPSSIEAFVSWFKSNFAALDILVNNAGV--SFNDIYKNTVEHAETVIRTNFYGAKLLT 145
           V+    I+  +S     F  +D LVNNAG         + + +    ++  N     L +
Sbjct: 68  VTKEEDIKTLISVTVERFGRIDCLVNNAGWHPPHQTTDETSAQEFRDLLNLNLISYFLAS 127

Query: 146 ESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVK 205
           +  LP  R+  S+  I+N+SS +G++                                  
Sbjct: 128 KYALPHLRK--SQGNIINLSSLVGSIG--------------------------------- 152

Query: 206 DGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSH 265
               + Q  P     Y  +K A+ A T  LA      G+ VN   PG   T + +   + 
Sbjct: 153 ----QKQAAP-----YVATKGAITAMTKALAVDESRYGVRVNCISPGNIWTPLWEELAAQ 203

Query: 266 TADEAADV 273
           T D  A +
Sbjct: 204 TPDTLATI 211

These classical SDRs includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the short-chain dehydrogenases/reductase family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 261

>gnl|CDD|168186 PRK05693, PRK05693, short chain dehydrogenase; Provisional

 Score = 70.2 bits (172), Expect = 6e-14
 Identities = 45/142 (31%), Positives = 67/142 (47%), Gaps = 9/142 (6%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           + ++TG + GIG AL       G  V  TAR  E     VE+L+  G      QLDV+D 
Sbjct: 3   VVLITGCSSGIGRALADAFKAAGYEVWATARKAED----VEALAAAGF--TAVQLDVNDG 56

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGV-SFNDIYKNTVEHAETVIRTNFYGAKLLTESLLP 150
           +++       ++    LD+L+NNAG  +   +    VE       TN +    +T +L P
Sbjct: 57  AALARLAEELEAEHGGLDVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFP 116

Query: 151 LFRRSPSKSRILNISSRLGTLS 172
           L RR  S+  ++NI S  G L 
Sbjct: 117 LLRR--SRGLVVNIGSVSGVLV 136

Length = 274

>gnl|CDD|235631 PRK05866, PRK05866, short chain dehydrogenase; Provisional

 Score = 70.5 bits (173), Expect = 6e-14
 Identities = 65/251 (25%), Positives = 100/251 (39%), Gaps = 57/251 (22%)

Query: 34  IVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSS 93
           ++TGA+ GIG A  ++ A  G TV+  AR  +      + ++  G        D+SD  +
Sbjct: 44  LLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDA 103

Query: 94  IEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRT---NFYGAKLLTESLLP 150
           ++A V+  +     +DIL+NNAG S       +++    V RT   N+Y    L   L P
Sbjct: 104 VDALVADVEKRIGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAP 163

Query: 151 --LFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGT 208
             L R       I+N+++  G LS+                         LF  SV    
Sbjct: 164 GMLERGD---GHIINVAT-WGVLSEA----------------------SPLF--SV---- 191

Query: 209 WKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNS-YCPGFTQTSMT------QG 261
                       Y  SK AL+A + V+   +   G+   + Y P    T M        G
Sbjct: 192 ------------YNASKAALSAVSRVIETEWGDRGVHSTTLYYP-LVATPMIAPTKAYDG 238

Query: 262 QGSHTADEAAD 272
             + TADEAA+
Sbjct: 239 LPALTADEAAE 249

Length = 293

>gnl|CDD|180761 PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score = 69.8 bits (171), Expect = 6e-14
 Identities = 43/144 (29%), Positives = 67/144 (46%), Gaps = 15/144 (10%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARD--VERGQRAVESLSEKGLPVNFFQLDVS 89
           +AIVTG N G+G      LA+ G  +I+T      +  +R +E    K   V F Q+D++
Sbjct: 17  VAIVTGGNTGLGQGYAVALAKAGADIIITTHGTNWDETRRLIEKEGRK---VTFVQVDLT 73

Query: 90  DPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHA-----ETVIRTNFYGAKLL 144
            P S E  V      F  +DILVNNAG     I +  +          V+  N      L
Sbjct: 74  KPESAEKVVKEALEEFGKIDILVNNAGT----IRRAPLLEYKDEDWNAVMDINLNSVYHL 129

Query: 145 TESLLPLFRRSPSKSRILNISSRL 168
           ++++  +  +  S  +I+NI+S L
Sbjct: 130 SQAVAKVMAKQGS-GKIINIASML 152

Length = 258

>gnl|CDD|181491 PRK08589, PRK08589, short chain dehydrogenase; Validated

 Score = 70.2 bits (172), Expect = 6e-14
 Identities = 61/242 (25%), Positives = 98/242 (40%), Gaps = 49/242 (20%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERG-QRAVESLSEKGLPVNFFQLDVSD 90
           +A++TGA+ GIG A    LA+ G  V+  A D+       V+ +   G     + +D+SD
Sbjct: 8   VAVITGASTGIGQASAIALAQEGAYVL--AVDIAEAVSETVDKIKSNGGKAKAYHVDISD 65

Query: 91  PSSIEAFVSWFKSNFAALDILVNNAGV--SFNDIYKNTVEHAETVIRTNFYGAKLLTESL 148
              ++ F S  K  F  +D+L NNAGV  +   I++  V+  + ++  +  G  L+T+ L
Sbjct: 66  EQQVKDFASEIKEQFGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKML 125

Query: 149 LPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGT 208
           LPL         I+N SS                             F G      + G 
Sbjct: 126 LPLMME--QGGSIINTSS-----------------------------FSGQAADLYRSG- 153

Query: 209 WKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTAD 268
                       Y  +K A+  +T  +A  Y  +GI  N+  PG  +T +       + D
Sbjct: 154 ------------YNAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTSED 201

Query: 269 EA 270
           EA
Sbjct: 202 EA 203

Length = 272

>gnl|CDD|187587 cd05326, secoisolariciresinol-DH_like_SDR_c, secoisolariciresinol dehydrogenase (secoisolariciresinol-DH)-like, classical (c) SDRs

 Score = 69.8 bits (171), Expect = 7e-14
 Identities = 69/272 (25%), Positives = 103/272 (37%), Gaps = 53/272 (19%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           +AI+TG   GIG A  +  A+ G  V++   D + GQ     L +    ++F   DV+  
Sbjct: 6   VAIITGGASGIGEATARLFAKHGARVVIADIDDDAGQAVAAELGDP--DISFVHCDVTVE 63

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVS---FNDIYKNTVEHAETVIRTNFYGAKLLTESL 148
           + + A V    + F  LDI+ NNAGV       I + ++E  E V+  N YGA L T+  
Sbjct: 64  ADVRAAVDTAVARFGRLDIMFNNAGVLGAPCYSILETSLEEFERVLDVNVYGAFLGTKHA 123

Query: 149 LPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGT 208
             +   +   S I++++S  G +                          GL   +     
Sbjct: 124 ARVMIPAKKGS-IVSVASVAGVVG-------------------------GLGPHA----- 152

Query: 209 WKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSM-TQGQGSHTA 267
                       Y  SK A+   T   A      GI VN   P    T + T G G    
Sbjct: 153 ------------YTASKHAVLGLTRSAATELGEHGIRVNCVSPYGVATPLLTAGFGVEDE 200

Query: 268 --DEAADVGARLL--LLHPQQLPTAKFYIGLD 295
             +EA    A L    L P+ +  A  Y+  D
Sbjct: 201 AIEEAVRGAANLKGTALRPEDIAAAVLYLASD 232

Podophyllum secoisolariciresinol-DH is a homo tetrameric, classical SDR that catalyzes the NAD-dependent conversion of (-)-secoisolariciresinol to (-)-matairesinol via a (-)-lactol intermediate. (-)-Matairesinol is an intermediate to various 8'-lignans, including the cancer-preventive mammalian lignan, and those involved in vascular plant defense. This subgroup also includes rice momilactone A synthase which catalyzes the conversion of 3beta-hydroxy-9betaH-pimara-7,15-dien-19,6beta-olide into momilactone A, Arabidopsis ABA2 which during abscisic acid (ABA) biosynthesis, catalyzes the conversion of xanthoxin to abscisic aldehyde and, maize Tasselseed2 which participate in the maize sex determination pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|187662 cd09761, A3DFK9-like_SDR_c, Clostridium thermocellum A3DFK9-like, a putative carbohydrate or polyalcohol metabolizing SDR, classical (c) SDRs

 Score = 69.5 bits (170), Expect = 7e-14
 Identities = 39/136 (28%), Positives = 60/136 (44%), Gaps = 6/136 (4%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           +AIVTG   GIG  +     E G  V+    D ERG    E+    G  + F   DV+D 
Sbjct: 3   VAIVTGGGHGIGKQICLDFLEAGDKVVFADIDEERGADFAEAE---GPNLFFVHGDVADE 59

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGV-SFNDIYKNTVEHAETVIRTNFYGAKLLTESLLP 150
           + ++  V         +D+LVNNA   S   +    +E  + ++  N  G   L+     
Sbjct: 60  TLVKFVVYAMLEKLGRIDVLVNNAARGSKGILSSLLLEEWDRILSVNLTGPYELSRYCRD 119

Query: 151 LFRRSPSKSRILNISS 166
              +  +K RI+NI+S
Sbjct: 120 ELIK--NKGRIINIAS 133

This subgroup includes a putative carbohydrate or polyalcohol metabolizing SDR (A3DFK9) from Clostridium thermocellum. Its members have a TGXXXGXG classical-SDR glycine-rich NAD-binding motif, and some have a canonical SDR active site tetrad (A3DFK9 lacks the upstream Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score = 70.6 bits (173), Expect = 1e-13
 Identities = 53/230 (23%), Positives = 91/230 (39%), Gaps = 56/230 (24%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           +  +TG  +GIG A+  R A  G  +++  RD E  ++  E+L ++ L     Q D++D 
Sbjct: 271 VVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLS---VQADITDE 327

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSFNDIYK----NTVEHAETVIRTNFYGAKLLTES 147
           +++E+  +  ++ +  LD+LVNNAG+   +++K     + E    V   N  GA     +
Sbjct: 328 AAVESAFAQIQARWGRLDVLVNNAGI--AEVFKPSLEQSAEDFTRVYDVNLSGAFACARA 385

Query: 148 LLPLFRRSPSKSRILNISSRLGTLS-KVRNPNIKSILEDEELSEEQIERFVGLFLQSVKD 206
              L         I+N+ S    L+   RN                              
Sbjct: 386 AARLMS---QGGVIVNLGSIASLLALPPRNA----------------------------- 413

Query: 207 GTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQT 256
                         Y  SK A+   +  LA  +   GI VN+  PG+ +T
Sbjct: 414 --------------YCASKAAVTMLSRSLACEWAPAGIRVNTVAPGYIET 449

Length = 520

>gnl|CDD|235925 PRK07067, PRK07067, sorbitol dehydrogenase; Provisional

 Score = 69.3 bits (170), Expect = 1e-13
 Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 3/85 (3%)

Query: 33  AIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPS 92
           A++TGA  GIG A+ +R    G  V++      R + A   +    + V    LDV+   
Sbjct: 9   ALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAV---SLDVTRQD 65

Query: 93  SIEAFVSWFKSNFAALDILVNNAGV 117
           SI+  V+     F  +DIL NNA +
Sbjct: 66  SIDRIVAAAVERFGGIDILFNNAAL 90

Length = 257

>gnl|CDD|236357 PRK08945, PRK08945, putative oxoacyl-(acyl carrier protein) reductase; Provisional

 Score = 68.7 bits (169), Expect = 1e-13
 Identities = 67/239 (28%), Positives = 92/239 (38%), Gaps = 56/239 (23%)

Query: 29  KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAV--ESLSEKGLPVNFFQL 86
           K+ I +VTGA  GIG       A  G TVIL  R  E+   AV  E  +  G       L
Sbjct: 11  KDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEK-LEAVYDEIEAAGGPQPAIIPL 69

Query: 87  DVS--DPSSIEAFVSWFKSNFAALDILVNNAGV-----SFNDIYKNTVEHAETVIRTNFY 139
           D+    P + +      +  F  LD +++NAG+               E  + V++ N  
Sbjct: 70  DLLTATPQNYQQLADTIEEQFGRLDGVLHNAGLLGELGPMEQQ---DPEVWQDVMQVNVN 126

Query: 140 GAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGL 199
              +LT++LLPL  +SP+ S +   SS                              VG 
Sbjct: 127 ATFMLTQALLPLLLKSPAASLVFTSSS------------------------------VG- 155

Query: 200 FLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSM 258
                       QG    W  YAVSK A      VLA  Y+G  + VN   PG T+T+M
Sbjct: 156 -----------RQG-RANWGAYAVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAM 202

Length = 247

>gnl|CDD|181225 PRK08085, PRK08085, gluconate 5-dehydrogenase; Provisional

 Score = 68.6 bits (168), Expect = 2e-13
 Identities = 57/234 (24%), Positives = 92/234 (39%), Gaps = 54/234 (23%)

Query: 33  AIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPS 92
            ++TG+ +GIGF L   LAE G  +I+     ER + AV  L ++G+  +    +V+   
Sbjct: 12  ILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQ 71

Query: 93  SIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHA-ETVIRTNFYGAKLLTESLLPL 151
            +EA +   + +   +D+L+NNAG+     +    E     VI  N     L+++++   
Sbjct: 72  EVEAAIEHIEKDIGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVA-- 129

Query: 152 FRRSPSKSR--ILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTW 209
            R    +    I+NI S                    EL  + I                
Sbjct: 130 -RYMVKRQAGKIINICSM-----------------QSELGRDTI---------------- 155

Query: 210 KSQGWPEIWTDYAVSKLALNAYTM---VLAKRYEGEGISVNSYCPGFTQTSMTQ 260
                    T YA SK A+   T    V   R+    I VN   PG+ +T MT+
Sbjct: 156 ---------TPYAASKGAVKMLTRGMCVELARHN---IQVNGIAPGYFKTEMTK 197

Length = 254

>gnl|CDD|187623 cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroid dehydrogenase (7 alpha-HSDH), classical (c) SDRs

 Score = 68.4 bits (167), Expect = 2e-13
 Identities = 61/240 (25%), Positives = 90/240 (37%), Gaps = 48/240 (20%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           +AIVTG   GIG A+   LA+ G +V++     E  +    ++ + G      + +V+  
Sbjct: 1   VAIVTGGAAGIGKAIAGTLAKAGASVVIADLKSEGAEAVAAAIQQAGGQAIGLECNVTSE 60

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGV--SFNDIYKNTVEHAETVIRTNFYGAKLLTESLL 149
             +EA V    S F  + ILVNNAG           T E  E   + N + A  L++   
Sbjct: 61  QDLEAVVKATVSQFGGITILVNNAGGGGPKPFDMPMTEEDFEWAFKLNLFSAFRLSQLCA 120

Query: 150 PLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTW 209
           P  +++   + ILNISS     S+ +N  I +                            
Sbjct: 121 PHMQKAGGGA-ILNISS---MSSENKNVRIAA---------------------------- 148

Query: 210 KSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTADE 269
                      Y  SK A+N  T  LA     +GI VN+  PG      T    S    E
Sbjct: 149 -----------YGSSKAAVNHMTRNLAFDLGPKGIRVNAVAPG---AVKTDALASVLTPE 194

This bacterial subgroup contains 7 alpha-HSDHs, including Escherichia coli 7 alpha-HSDH. 7 alpha-HSDH, a member of the SDR family, catalyzes the NAD+ -dependent dehydrogenation of a hydroxyl group at position 7 of the steroid skeleton of bile acids. In humans the two primary bile acids are cholic and chenodeoxycholic acids, these are formed from cholesterol in the liver. Escherichia coli 7 alpha-HSDH dehydroxylates these bile acids in the human intestine. Mammalian 7 alpha-HSDH activity has been found in livers. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|181131 PRK07814, PRK07814, short chain dehydrogenase; Provisional

 Score = 68.7 bits (168), Expect = 2e-13
 Identities = 39/142 (27%), Positives = 63/142 (44%), Gaps = 1/142 (0%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           +A+VTGA +G+G A+    AE G  V++ AR   +     E +   G   +    D++ P
Sbjct: 12  VAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHP 71

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSF-NDIYKNTVEHAETVIRTNFYGAKLLTESLLP 150
            +           F  LDI+VNN G +  N +   + +        N   A  LT + +P
Sbjct: 72  EATAGLAGQAVEAFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVP 131

Query: 151 LFRRSPSKSRILNISSRLGTLS 172
           L         ++NISS +G L+
Sbjct: 132 LMLEHSGGGSVINISSTMGRLA 153

Length = 263

>gnl|CDD|187607 cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP]reductase (BKR), subgroup 2, classical (c) SDR

 Score = 67.9 bits (166), Expect = 2e-13
 Identities = 52/234 (22%), Positives = 93/234 (39%), Gaps = 54/234 (23%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILT-ARDVERGQRAVESLSEKGLPVNFFQLDVSD 90
           + +VTGA++G+G A+ +  A  G  V++   R  E  +       E+ + +   Q DV D
Sbjct: 2   VVLVTGASRGLGAAIARSFAREGARVVVNYYRSTESAEAVAAEAGERAIAI---QADVRD 58

Query: 91  PSSIEAFVSWFKSNFAALDILVNNA--GVSFNDIYKNTVEHAE-----TVIRTNFYGAKL 143
              ++A +   K++F  +D +VNNA     F+   + T +  +       +     GA  
Sbjct: 59  RDQVQAMIEEAKNHFGPVDTIVNNALIDFPFDPDQRKTFDTIDWEDYQQQLEGAVKGALN 118

Query: 144 LTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQS 203
           L +++LP F+      R++NI + L      +NP +                        
Sbjct: 119 LLQAVLPDFKER-GSGRVINIGTNL-----FQNPVVP----------------------- 149

Query: 204 VKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTS 257
                         + DY  +K AL  +T  +AK     GI+VN    G  + +
Sbjct: 150 --------------YHDYTTAKAALLGFTRNMAKELGPYGITVNMVSGGLLKVT 189

This subgroup includes Rhizobium sp. NGR234 FabG1. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|187640 cd08935, mannonate_red_SDR_c, putative D-mannonate oxidoreductase, classical (c) SDR

 Score = 68.3 bits (167), Expect = 2e-13
 Identities = 52/247 (21%), Positives = 90/247 (36%), Gaps = 64/247 (25%)

Query: 29  KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDV 88
           K  +A++TG    +G A+ + LA+ G  V    R+ E+G +  + ++  G        DV
Sbjct: 4   KNKVAVITGGTGVLGGAMARALAQAGAKVAALGRNQEKGDKVAKEITALGGRAIALAADV 63

Query: 89  SDPSSIEAFVSWFKSNFAALDILVNNAG---------------VSFNDIYKNTVEHAETV 133
            D +S+E       + F  +DIL+N AG                +  + +    E  E V
Sbjct: 64  LDRASLERAREEIVAQFGTVDILINGAGGNHPDATTDPEHYEPETEQNFFDLDEEGWEFV 123

Query: 134 IRTNFYGAKLLTESLLPLFRRSPSKSR---ILNISSRLGTLSKVRNPNIKSILEDEELSE 190
              N  G+ L ++    +F +   + +   I+NISS        + P             
Sbjct: 124 FDLNLNGSFLPSQ----VFGKDMLEQKGGSIINISSMNAFSPLTKVPA------------ 167

Query: 191 EQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYC 250
                                         Y+ +K A++ +T  LA  +   G+ VN+  
Sbjct: 168 ------------------------------YSAAKAAVSNFTQWLAVEFATTGVRVNAIA 197

Query: 251 PGFTQTS 257
           PGF  T 
Sbjct: 198 PGFFVTP 204

D-mannonate oxidoreductase catalyzes the NAD-dependent interconversion of D-mannonate and D-fructuronate. This subgroup includes Bacillus subtitils UxuB/YjmF, a putative D-mannonate oxidoreductase; the B. subtilis UxuB gene is part of a putative ten-gene operon (the Yjm operon) involved in hexuronate catabolism. Escherichia coli UxuB does not belong to this subgroup. This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 271

>gnl|CDD|181077 PRK07677, PRK07677, short chain dehydrogenase; Provisional

 Score = 68.2 bits (167), Expect = 3e-13
 Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 1/91 (1%)

Query: 29  KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDV 88
           ++ + I+TG + G+G A+ KR AE G  V++T R  E+ + A   + +    V   Q+DV
Sbjct: 1   EKVV-IITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDV 59

Query: 89  SDPSSIEAFVSWFKSNFAALDILVNNAGVSF 119
            +P  ++  V      F  +D L+NNA  +F
Sbjct: 60  RNPEDVQKMVEQIDEKFGRIDALINNAAGNF 90

Length = 252

>gnl|CDD|181113 PRK07775, PRK07775, short chain dehydrogenase; Provisional

 Score = 68.2 bits (167), Expect = 3e-13
 Identities = 40/119 (33%), Positives = 66/119 (55%), Gaps = 1/119 (0%)

Query: 33  AIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPS 92
           A+V GA+ GIG A    LA  G  V L AR VE+ +  V+ +   G     F LDV+DP 
Sbjct: 13  ALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPD 72

Query: 93  SIEAFVSWFKSNFAALDILVNNAG-VSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLP 150
           S+++FV+  +     +++LV+ AG   F  +++ + E  E+ ++ +  GA  L  ++LP
Sbjct: 73  SVKSFVAQAEEALGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLP 131

Length = 274

>gnl|CDD|187666 cd09806, type1_17beta-HSD-like_SDR_c, human estrogenic 17beta-hydroxysteroid dehydrogenase type 1 (type 1 17beta-HSD)-like, classical (c) SDRs

 Score = 68.3 bits (167), Expect = 3e-13
 Identities = 45/144 (31%), Positives = 66/144 (45%), Gaps = 8/144 (5%)

Query: 31  TIAIVTGANKGIGFALVKRLA---ELGLTVILTARDVERGQRAVESLSEK-GLPVNFFQL 86
           T+ ++TG + GIG  L  RLA        V  T RD+++  R  E+     G  +   QL
Sbjct: 1   TVVLITGCSSGIGLHLAVRLASDPSKRFKVYATMRDLKKKGRLWEAAGALAGGTLETLQL 60

Query: 87  DVSDPSSIEAFVSWFKSNFAALDILVNNAGVSF-NDIYKNTVEHAETVIRTNFYGAKLLT 145
           DV D  S+ A V         +D+LV NAGV     +   + +   +V   N +G   + 
Sbjct: 61  DVCDSKSVAAAVERVTER--HVDVLVCNAGVGLLGPLEALSEDAMASVFDVNVFGTVRML 118

Query: 146 ESLLPLFRRSPSKSRILNISSRLG 169
           ++ LP  +R  S  RIL  SS  G
Sbjct: 119 QAFLPDMKRRGS-GRILVTSSVGG 141

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical SDR subgroup includes human type 1 17beta-HSD, human retinol dehydrogenase 8, zebrafish photoreceptor associated retinol dehydrogenase type 2, and a chicken ovary-specific 17beta-hydroxysteroid dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|181139 PRK07832, PRK07832, short chain dehydrogenase; Provisional

 Score = 67.8 bits (166), Expect = 4e-13
 Identities = 40/139 (28%), Positives = 67/139 (48%), Gaps = 2/139 (1%)

Query: 33  AIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQ-LDVSDP 91
             VTGA  GIG A   RLA  G  + LT RD +   + V      G  V   + LD+SD 
Sbjct: 3   CFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDY 62

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVS-FNDIYKNTVEHAETVIRTNFYGAKLLTESLLP 150
            ++ AF +   +   ++D+++N AG+S +  + + T E    ++  N  G   + E+ +P
Sbjct: 63  DAVAAFAADIHAAHGSMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVP 122

Query: 151 LFRRSPSKSRILNISSRLG 169
               +     ++N+SS  G
Sbjct: 123 PMVAAGRGGHLVNVSSAAG 141

Length = 272

>gnl|CDD|187647 cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase, classical (c) SDRs

 Score = 66.3 bits (162), Expect = 9e-13
 Identities = 35/137 (25%), Positives = 65/137 (47%), Gaps = 2/137 (1%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           +A+VTG   GIG A+ KRLA  G  V++   D E  ++  E+       +   Q DV+  
Sbjct: 3   VALVTGGASGIGLAIAKRLAAEGAAVVVADIDPEIAEKVAEAAQGGPRALG-VQCDVTSE 61

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSFND-IYKNTVEHAETVIRTNFYGAKLLTESLLP 150
           + +++        F  LDI+V+NAG++ +  I + ++E     +  N  G  L++     
Sbjct: 62  AQVQSAFEQAVLEFGGLDIVVSNAGIATSSPIAETSLEDWNRSMDINLTGHFLVSREAFR 121

Query: 151 LFRRSPSKSRILNISSR 167
           + +       I+  +S+
Sbjct: 122 IMKSQGIGGNIVFNASK 138

This family has bifunctional proteins with an N-terminal aldolase and a C-terminal classical SDR domain. One member is identified as a rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. The SDR domain has a canonical SDR glycine-rich NAD(P) binding motif and a match to the characteristic active site triad. However, it lacks an upstream active site Asn typical of SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|235703 PRK06125, PRK06125, short chain dehydrogenase; Provisional

 Score = 66.6 bits (163), Expect = 9e-13
 Identities = 30/85 (35%), Positives = 42/85 (49%), Gaps = 5/85 (5%)

Query: 33  AIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEK-GLPVNFFQLDVSDP 91
            ++TGA+KGIG A  +  A  G  + L ARD +  +     L    G+ V    LD+S P
Sbjct: 10  VLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSP 69

Query: 92  SSIEAFVSWFKSNFAALDILVNNAG 116
            + E       +    +DILVNNAG
Sbjct: 70  EAREQLA----AEAGDIDILVNNAG 90

Length = 259

>gnl|CDD|180440 PRK06172, PRK06172, short chain dehydrogenase; Provisional

 Score = 66.3 bits (162), Expect = 1e-12
 Identities = 61/254 (24%), Positives = 91/254 (35%), Gaps = 51/254 (20%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           +A+VTG   GIG A     A  G  V++  RD   G+  V  + E G    F   DV+  
Sbjct: 9   VALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRD 68

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSFND--IYKNTVEHAETVIRTNFYGAKLLTESLL 149
           + ++A V    + +  LD   NNAG+      + + +    + ++  N  G  L  +  +
Sbjct: 69  AEVKALVEQTIAAYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQI 128

Query: 150 PLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTW 209
           PL       + I+N +S  G       P + SI                           
Sbjct: 129 PLMLAQGGGA-IVNTASVAGL---GAAPKM-SI--------------------------- 156

Query: 210 KSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTADE 269
                      YA SK A+   T   A  Y  +GI VN+ CP    T M +      A E
Sbjct: 157 -----------YAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFR-----RAYE 200

Query: 270 A-ADVGARLLLLHP 282
           A          +HP
Sbjct: 201 ADPRKAEFAAAMHP 214

Length = 253

>gnl|CDD|182051 PRK09730, PRK09730, putative NAD(P)-binding oxidoreductase; Provisional

 Score = 66.0 bits (161), Expect = 1e-12
 Identities = 62/232 (26%), Positives = 92/232 (39%), Gaps = 46/232 (19%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILT-ARDVERGQRAVESLSEKGLPVNFFQLDVSD 90
           IA+VTG ++GIG A    LA+ G TV +   +++   Q  V  +++ G      Q D+SD
Sbjct: 3   IALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISD 62

Query: 91  PSSIEAFVSWFKSNFAALDILVNNAGVSFND--IYKNTVEHAETVIRTNFYGAKLLT-ES 147
            + + A  +    +   L  LVNNAG+ F    +   T E    V+ TN  G  L   E+
Sbjct: 63  ENQVVAMFTAIDQHDEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREA 122

Query: 148 LLPLFRRSPSK-SRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKD 206
           +  +  +       I+N+SS    L                                   
Sbjct: 123 VKRMALKHGGSGGAIVNVSSAASRL----------------------------------- 147

Query: 207 GTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSM 258
                 G P  + DYA SK A++  T  L+     +GI VN   PGF  T M
Sbjct: 148 ------GAPGEYVDYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEM 193

Length = 247

>gnl|CDD|237189 PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 65.9 bits (161), Expect = 2e-12
 Identities = 60/252 (23%), Positives = 94/252 (37%), Gaps = 75/252 (29%)

Query: 28  SKETIAIVTGANK--GIGFALVKRLAELGLTVILT---ARDVE-----RGQRAV---ESL 74
             + IA+VTGA++  GIG A+ +RLA  G+ +  T     D         +  V   E +
Sbjct: 3   LMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEI 62

Query: 75  SEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKN-TVE----H 129
              G+     ++D+S P +                IL+NNA  S +   +  T E    H
Sbjct: 63  ESYGVRCEHMEIDLSQPYAPNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKH 122

Query: 130 AETVIRTNFYGAKLLTESLLPLFRR---SPSKSRILNISS--RLGTLSKVRNPNIKSILE 184
               +R       LL+      F +     +  RI+N++S   LG +     P+      
Sbjct: 123 YAVNVRATM----LLSS----AFAKQYDGKAGGRIINLTSGQSLGPM-----PD------ 163

Query: 185 DEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGI 244
             EL+                               YA +K A+ A+T  LA     +GI
Sbjct: 164 --ELA-------------------------------YAATKGAIEAFTKSLAPELAEKGI 190

Query: 245 SVNSYCPGFTQT 256
           +VN+  PG T T
Sbjct: 191 TVNAVNPGPTDT 202

Length = 256

>gnl|CDD|235853 PRK06701, PRK06701, short chain dehydrogenase; Provisional

 Score = 65.8 bits (161), Expect = 2e-12
 Identities = 64/265 (24%), Positives = 100/265 (37%), Gaps = 62/265 (23%)

Query: 29  KETIAIVTGANKGIGFALVKRLAELGLTVILT----ARDVERGQRAVESLSEKGLPVNFF 84
           K  +A++TG + GIG A+    A+ G  + +       D    ++ VE    K L +   
Sbjct: 45  KGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLI--- 101

Query: 85  QLDVSDPSSIEAFVSWFKSNFAALDILVNNAGV-----SFNDIYKNTVEHAETVIRTNFY 139
             DVSD +  +  V         LDILVNNA       S  DI   T E  +   +TN Y
Sbjct: 102 PGDVSDEAFCKDAVEETVRELGRLDILVNNAAFQYPQQSLEDI---TAEQLDKTFKTNIY 158

Query: 140 GAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGL 199
               +T++ LP  ++    S I+N  S            I     +E L           
Sbjct: 159 SYFHMTKAALPHLKQG---SAIINTGS------------ITGYEGNETL----------- 192

Query: 200 FLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMT 259
                               DY+ +K A++A+T  LA+    +GI VN+  PG   T + 
Sbjct: 193 -------------------IDYSATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLI 233

Query: 260 QGQGSHTADEAADVGARLLLLHPQQ 284
                   ++ +  G+   +  P Q
Sbjct: 234 --PSDFDEEKVSQFGSNTPMQRPGQ 256

Length = 290

>gnl|CDD|180983 PRK07453, PRK07453, protochlorophyllide oxidoreductase; Validated

 Score = 66.2 bits (162), Expect = 2e-12
 Identities = 46/148 (31%), Positives = 69/148 (46%), Gaps = 21/148 (14%)

Query: 33  AIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLP---VNFFQLDVS 89
            I+TGA+ G+G    K LA+ G  VI+  R++++ + A + L   G+P        +D+ 
Sbjct: 9   VIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQEL---GIPPDSYTIIHIDLG 65

Query: 90  DPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYK-------NTVEHAETVIRTNFYGAK 142
           D  S+  FV  F++    LD LV NA V     Y         + +  E  + TN  G  
Sbjct: 66  DLDSVRRFVDDFRALGKPLDALVCNAAV-----YMPLLKEPLRSPQGYELSMATNHLGHF 120

Query: 143 LLTESLLPLFRRSPSKSRILNISSRLGT 170
           LL   LL   ++SP+    L I   LGT
Sbjct: 121 LLCNLLLEDLKKSPAPDPRLVI---LGT 145

Length = 322

>gnl|CDD|177895 PLN02253, PLN02253, xanthoxin dehydrogenase

 Score = 65.6 bits (160), Expect = 2e-12
 Identities = 46/151 (30%), Positives = 72/151 (47%), Gaps = 10/151 (6%)

Query: 12  SSSSSSSSLVSSTKWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAV 71
           +++SSS+S + S +   K  +A+VTG   GIG ++V+   + G  V +     + GQ   
Sbjct: 2   ATASSSASSLPSQRLLGK--VALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVC 59

Query: 72  ESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDILVNNAGVS---FNDIYKNTVE 128
           +SL  +   V FF  DV+    +   V +    F  LDI+VNNAG++     DI    + 
Sbjct: 60  DSLGGEP-NVCFFHCDVTVEDDVSRAVDFTVDKFGTLDIMVNNAGLTGPPCPDIRNVELS 118

Query: 129 HAETVIRTN----FYGAKLLTESLLPLFRRS 155
             E V   N    F G K     ++PL + S
Sbjct: 119 EFEKVFDVNVKGVFLGMKHAARIMIPLKKGS 149

Length = 280

>gnl|CDD|235935 PRK07109, PRK07109, short chain dehydrogenase; Provisional

 Score = 66.1 bits (162), Expect = 2e-12
 Identities = 36/142 (25%), Positives = 58/142 (40%), Gaps = 8/142 (5%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           + ++TGA+ G+G A  +  A  G  V+L AR  E  +     +   G        DV+D 
Sbjct: 10  VVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADA 69

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVS----FNDIYKNTVEHAETVIRTNFYGAKLLTES 147
            +++A     +     +D  VNNA V+    F D+   T E    V    + G    T +
Sbjct: 70  EAVQAAADRAEEELGPIDTWVNNAMVTVFGPFEDV---TPEEFRRVTEVTYLGVVHGTLA 126

Query: 148 LLPLFRRSPSKSRILNISSRLG 169
            L   R    +  I+ + S L 
Sbjct: 127 ALRHMRPR-DRGAIIQVGSALA 147

Length = 334

>gnl|CDD|187592 cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydrozybenzoate dehydrogenases, classical (c) SDRs

 Score = 65.2 bits (159), Expect = 3e-12
 Identities = 40/135 (29%), Positives = 61/135 (45%), Gaps = 9/135 (6%)

Query: 33  AIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPS 92
            IVTGA +GIG A+ + L + G TVI  A D          L E G P+    LDV+D +
Sbjct: 1   VIVTGAAQGIGRAVARHLLQAGATVI--ALD-----LPFVLLLEYGDPLRLTPLDVADAA 53

Query: 93  SIEAFVSWFKSNFAALDILVNNAGV-SFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPL 151
           ++    S   +    +D LVN AGV         + E  E     N  G   L +++ P 
Sbjct: 54  AVREVCSRLLAEHGPIDALVNCAGVLRPGATDPLSTEDWEQTFAVNVTGVFNLLQAVAPH 113

Query: 152 FRRSPSKSRILNISS 166
            +   + + I+ ++S
Sbjct: 114 MKDRRTGA-IVTVAS 127

2,3 dihydro-2,3 dihydrozybenzoate dehydrogenase shares the characteristics of the classical SDRs. This subgroup includes Escherichai coli EntA which catalyzes the NAD+-dependent oxidation of 2,3-dihydro-2,3-dihydroxybenzoate to 2,3-dihydroxybenzoate during biosynthesis of the siderophore Enterobactin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|187626 cd05368, DHRS6_like_SDR_c, human DHRS6-like, classical (c) SDRs

 Score = 64.8 bits (158), Expect = 3e-12
 Identities = 54/232 (23%), Positives = 88/232 (37%), Gaps = 56/232 (24%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           +A++T A +GIG A+    A  G  VI T  + E+ +       E+G  +    LDV+D 
Sbjct: 4   VALITAAAQGIGRAIALAFAREGANVIATDINEEKLKEL-----ERGPGITTRVLDVTDK 58

Query: 92  SSIEAFVSWFKSNFAALDILVNNAG-VSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLP 150
             + A           +D+L N AG V    I     +  +  +  N     L+ +++LP
Sbjct: 59  EQVAALA----KEEGRIDVLFNCAGFVHHGSILDCEDDDWDFAMNLNVRSMYLMIKAVLP 114

Query: 151 --LFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGT 208
             L R+      I+N+SS   ++  V N                  RFV           
Sbjct: 115 KMLARKD---GSIINMSSVASSIKGVPN------------------RFV----------- 142

Query: 209 WKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ 260
                       Y+ +K A+   T  +A  +  +GI  N+ CPG   T   +
Sbjct: 143 ------------YSTTKAAVIGLTKSVAADFAQQGIRCNAICPGTVDTPSLE 182

Human DHRS6, and similar proteins. These proteins are classical SDRs, with a canonical active site tetrad and a close match to the typical Gly-rich NAD-binding motif. Human DHRS6 is a cytosolic type 2 (R)-hydroxybutyrate dehydrogenase, which catalyses the conversion of (R)-hydroxybutyrate to acetoacetate. Also included in this subgroup is Escherichia coli UcpA (upstream cys P). Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Note: removed : needed to make this chiodl smaller when drew final trees: rmeoved text form description: Other proteins in this subgroup include Thermoplasma acidophilum aldohexose dehydrogenase, which has high dehydrogenase activity against D-mannose, Bacillus subtilis BacC involved in the biosynthesis of the dipeptide bacilysin and its antibiotic moiety anticapsin, Sphingomonas paucimobilis strain B90 LinC, involved in the degradation of hexachlorocyclohexane isomers...... P). Length = 241

>gnl|CDD|237219 PRK12827, PRK12827, short chain dehydrogenase; Provisional

 Score = 64.4 bits (157), Expect = 5e-12
 Identities = 60/231 (25%), Positives = 87/231 (37%), Gaps = 47/231 (20%)

Query: 33  AIVTGANKGIGFALVKRLAELGLTVILTARDVERG----QRAVESLSEKGLPVNFFQLDV 88
            ++TG + G+G A+  RLA  G  VI+      RG          +   G        DV
Sbjct: 9   VLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDV 68

Query: 89  SDPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKN-TVEHAETVIRTNFYGAKLLTES 147
            D ++  A +      F  LDILVNNAG++ +  +   ++E  + VI  N  G   +T++
Sbjct: 69  RDFAATRAALDAGVEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQA 128

Query: 148 LLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDG 207
            LP   R+    RI+NI+S  G                                      
Sbjct: 129 ALPPMIRARRGGRIVNIASVAGV------------------------------------R 152

Query: 208 TWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSM 258
             + Q       +YA SK  L   T  LA      GI+VN+  PG   T M
Sbjct: 153 GNRGQV------NYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPM 197

Length = 249

>gnl|CDD|187615 cd05357, PR_SDR_c, pteridine reductase (PR), classical (c) SDRs

 Score = 63.8 bits (156), Expect = 6e-12
 Identities = 50/224 (22%), Positives = 72/224 (32%), Gaps = 46/224 (20%)

Query: 33  AIVTGANKGIGFALVKRLAELGLTVILTARDVERG-QRAVESLSEKGLPVNFFQLDVSDP 91
           A+VTGA K IG A+ + LA  G  V++     E   QR  + L+         Q D+SD 
Sbjct: 3   ALVTGAAKRIGRAIAEALAAEGYRVVVHYNRSEAEAQRLKDELNALRNSAVLVQADLSDF 62

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSF-NDIYKNTVEHAETVIRTNFYGAKLLTESLLP 150
           ++    V+     F   D+LVNNA   +   + + + +    +   N     LL ++   
Sbjct: 63  AACADLVAAAFRAFGRCDVLVNNASAFYPTPLGQGSEDAWAELFGINLKAPYLLIQAFAR 122

Query: 151 LFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWK 210
               S     I+NI                    D          F              
Sbjct: 123 RLAGS-RNGSIINII-------------------DAMTDRPLTGYFA------------- 149

Query: 211 SQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFT 254
                     Y +SK AL   T   A       I VN   PG  
Sbjct: 150 ----------YCMSKAALEGLTRSAALELAPN-IRVNGIAPGLI 182

Pteridine reductases (PRs), members of the SDR family, catalyzes the NAD-dependent reduction of folic acid, dihydrofolate and related compounds. In Leishmania, pteridine reductase (PTR1) acts to circumvent the anti-protozoan drugs that attack dihydrofolate reductase activity. Proteins in this subgroup have an N-terminal NAD-binding motif and a YxxxK active site motif, but have an Asp instead of the usual upstream catalytic Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 234

>gnl|CDD|180993 PRK07478, PRK07478, short chain dehydrogenase; Provisional

 Score = 63.8 bits (156), Expect = 7e-12
 Identities = 37/117 (31%), Positives = 53/117 (45%), Gaps = 6/117 (5%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           +AI+TGA+ GIG A  K  A  G  V++ AR      + V  +  +G        DV D 
Sbjct: 8   VAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDE 67

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGV--SFNDIYKNTVEHAETVIRTN----FYGAK 142
           +  +A V+     F  LDI  NNAG       + + ++E     + TN    F GAK
Sbjct: 68  AYAKALVALAVERFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAK 124

Length = 254

>gnl|CDD|181159 PRK07890, PRK07890, short chain dehydrogenase; Provisional

 Score = 63.8 bits (156), Expect = 8e-12
 Identities = 57/243 (23%), Positives = 86/243 (35%), Gaps = 46/243 (18%)

Query: 29  KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDV 88
           K  + +V+G   G+G  L  R A  G  V+L AR  ER       + + G        D+
Sbjct: 4   KGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDI 63

Query: 89  SDPSSIEAFVSWFKSNFAALDILVNNAGV--SFNDIYKNTVEHAETVIRTNFYGAKLLTE 146
           +D       V+     F  +D LVNNA    S   +      H   VI  N  G   LT+
Sbjct: 64  TDEDQCANLVALALERFGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQ 123

Query: 147 SLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKD 206
           +  P    + S   I+ I+S +     +R+                  ++          
Sbjct: 124 AFTPAL--AESGGSIVMINSMV-----LRHSQ---------------PKYGA-------- 153

Query: 207 GTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHT 266
                         Y ++K AL A +  LA     +GI VNS  PG+      +G   H 
Sbjct: 154 --------------YKMAKGALLAASQSLATELGPQGIRVNSVAPGYIWGDPLKGYFRHQ 199

Query: 267 ADE 269
           A +
Sbjct: 200 AGK 202

Length = 258

>gnl|CDD|168204 PRK05717, PRK05717, oxidoreductase; Validated

 Score = 63.8 bits (155), Expect = 9e-12
 Identities = 45/140 (32%), Positives = 67/140 (47%), Gaps = 12/140 (8%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           +A+VTGA +GIG  +   L   G  V+L   D ERG +  ++L E      F  +DV+D 
Sbjct: 12  VALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAW---FIAMDVADE 68

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVE-----HAETVIRTNFYGAKLLTE 146
           + + A V+     F  LD LV NA ++  D +  T+E     H   V+  N  G  LL +
Sbjct: 69  AQVAAGVAEVLGQFGRLDALVCNAAIA--DPHNTTLESLSLAHWNRVLAVNLTGPMLLAK 126

Query: 147 SLLPLFRRSPSKSRILNISS 166
              P  R       I+N++S
Sbjct: 127 HCAPYLR--AHNGAIVNLAS 144

Length = 255

>gnl|CDD|180411 PRK06123, PRK06123, short chain dehydrogenase; Provisional

 Score = 63.3 bits (154), Expect = 1e-11
 Identities = 58/235 (24%), Positives = 90/235 (38%), Gaps = 52/235 (22%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILT-ARDVERGQRAVESLSEKGLPVNFFQLDVSD 90
           + I+TGA++GIG A     AE G  V L   R+ +  +  V+++  +G        DV+D
Sbjct: 4   VMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVAD 63

Query: 91  PSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHA--ETVIRTNFYGAKLLTESL 148
            + +             LD LVNNAG+    +    ++ A    +  TN  G+ L     
Sbjct: 64  EADVLRLFEAVDRELGRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREA 123

Query: 149 LPLFRRSPSK-----SRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQS 203
           +   +R  ++       I+N+SS    L                                
Sbjct: 124 V---KRMSTRHGGRGGAIVNVSSMAARL-------------------------------- 148

Query: 204 VKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSM 258
                    G P  + DYA SK A++  T+ LAK    EGI VN+  PG   T +
Sbjct: 149 ---------GSPGEYIDYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEI 194

Length = 248

>gnl|CDD|200089 TIGR01289, LPOR, light-dependent protochlorophyllide reductase

 Score = 63.7 bits (155), Expect = 1e-11
 Identities = 46/143 (32%), Positives = 68/143 (47%), Gaps = 6/143 (4%)

Query: 33  AIVTGANKGIGFALVKRLAELGL-TVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
            I+TGA+ G+G    K LA  G   VI+  RD  + ++A +SL           LD+   
Sbjct: 6   VIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSL 65

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSFN--DIYKNTVEHAETVIRTNFYGAKLLTESLL 149
            S+  FV  F+ +   LD LV NA V F      + T +  E  + TN  G  LL   LL
Sbjct: 66  DSVRQFVQQFRESGRPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLL 125

Query: 150 PLFRRSPSKSRILNISSRLGTLS 172
              + SP+K + L I   +G+++
Sbjct: 126 DDLKNSPNKDKRLII---VGSIT 145

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form [Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll]. Length = 314

>gnl|CDD|235816 PRK06500, PRK06500, short chain dehydrogenase; Provisional

 Score = 63.1 bits (154), Expect = 1e-11
 Identities = 61/229 (26%), Positives = 83/229 (36%), Gaps = 57/229 (24%)

Query: 33  AIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPS 92
           A++TG   GIG    ++    G  V +T RD    + A   L E  L +   + D  D +
Sbjct: 9   ALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVI---RADAGDVA 65

Query: 93  SIEAFVSWFKSNFAALDILVNNAGVS-FNDIYKNTVEHAETVIRTNFYGAKLLTESLLPL 151
           + +A        F  LD +  NAGV+ F  +        +    TN  G   L ++LLPL
Sbjct: 66  AQKALAQALAEAFGRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPL 125

Query: 152 FRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKS 211
                S   +LN S                           I   +G+   SV       
Sbjct: 126 LANPASI--VLNGS---------------------------INAHIGMPNSSV------- 149

Query: 212 QGWPEIWTDYAVSKLALNAYTMVLAKRYEGE----GISVNSYCPGFTQT 256
                    YA SK AL +    LAK   GE    GI VN+  PG  QT
Sbjct: 150 ---------YAASKAALLS----LAKTLSGELLPRGIRVNAVSPGPVQT 185

Length = 249

>gnl|CDD|237187 PRK12743, PRK12743, oxidoreductase; Provisional

 Score = 62.7 bits (153), Expect = 2e-11
 Identities = 51/231 (22%), Positives = 78/231 (33%), Gaps = 44/231 (19%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILT-ARDVERGQRAVESLSEKGLPVNFFQLDVSD 90
           +AIVT ++ GIG A    LA+ G  + +T   D E  +   E +   G+     QLD+SD
Sbjct: 4   VAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSD 63

Query: 91  PSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNT-VEHAETVIRTNFYGAKLLTESLL 149
                  +         +D+LVNNAG      + +   +    +   +  GA L ++   
Sbjct: 64  LPEGAQALDKLIQRLGRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAA 123

Query: 150 PLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTW 209
               +     RI+NI+S                        E                  
Sbjct: 124 RHMVKQGQGGRIINITS----------------------VHEHTPLPGA----------- 150

Query: 210 KSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ 260
                    + Y  +K AL   T  +A      GI VN+  PG   T M  
Sbjct: 151 ---------SAYTAAKHALGGLTKAMALELVEHGILVNAVAPGAIATPMNG 192

Length = 256

>gnl|CDD|180774 PRK06953, PRK06953, short chain dehydrogenase; Provisional

 Score = 62.4 bits (152), Expect = 2e-11
 Identities = 61/234 (26%), Positives = 87/234 (37%), Gaps = 64/234 (27%)

Query: 33  AIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPS 92
            ++ GA++GIG   V++    G  VI TARD      A+ +L   G       LDV+DP+
Sbjct: 4   VLIVGASRGIGREFVRQYRADGWRVIATARD----AAALAALQALGAEA--LALDVADPA 57

Query: 93  SIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIR--------TNFYGAKLL 144
           S+    +W K +  ALD  V  AGV     Y    E  E + R        TN  G   L
Sbjct: 58  SVAGL-AW-KLDGEALDAAVYVAGV-----YGPRTEGVEPITREDFDAVMHTNVLGPMQL 110

Query: 145 TESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSV 204
              LLPL   +     +L  SSR+G++                                 
Sbjct: 111 LPILLPLVEAAGGVLAVL--SSRMGSIGDATG---------------------------- 140

Query: 205 KDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSM 258
                 + GW      Y  SK ALN    + A   +    +  +  PG+ +T M
Sbjct: 141 ------TTGWL-----YRASKAALND--ALRAASLQARHATCIALHPGWVRTDM 181

Length = 222

>gnl|CDD|180823 PRK07074, PRK07074, short chain dehydrogenase; Provisional

 Score = 62.9 bits (153), Expect = 2e-11
 Identities = 56/230 (24%), Positives = 85/230 (36%), Gaps = 55/230 (23%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKG-LPVNFFQLDVSD 90
            A+VTGA  GIG AL +R    G  V+    D        ++L +   +PV     D++D
Sbjct: 4   TALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPV---ACDLTD 60

Query: 91  PSSIEAFVSWFKSNFAALDILVNNAG----VSFNDIYKNTVEHAETVIRTNFYGAKLLTE 146
            +S+ A ++   +    +D+LV NAG     S +D    T          N   A L  E
Sbjct: 61  AASLAAALANAAAERGPVDVLVANAGAARAASLHD---TTPASWRADNALNLEAAYLCVE 117

Query: 147 SLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKD 206
           ++L    +  S+  ++NI S  G                           +         
Sbjct: 118 AVLEGMLKR-SRGAVVNIGSVNG---------------------------MAAL------ 143

Query: 207 GTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQT 256
                 G P     Y+ +K  L  YT +LA  Y   GI  N+  PG  +T
Sbjct: 144 ------GHPA----YSAAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKT 183

Length = 257

>gnl|CDD|180796 PRK07023, PRK07023, short chain dehydrogenase; Provisional

 Score = 62.3 bits (152), Expect = 2e-11
 Identities = 45/158 (28%), Positives = 70/158 (44%), Gaps = 23/158 (14%)

Query: 30  ETIAIVTGANKGIGFALVKRLAELGLTVILTAR--DVERGQRAVESLSEKGLPVNFFQLD 87
              AIVTG ++G+G AL ++L + G+ V+  AR         A E L+E        +LD
Sbjct: 1   AVRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPSLAAAAGERLAE-------VELD 53

Query: 88  VSDPSSIEAFV-SWFKSNF---AALDILVNNAGVSFNDIYKNTVEHAETVIR---TNFYG 140
           +SD ++  A++     + F   A+  +L+NNAG     I       A  + R    N   
Sbjct: 54  LSDAAAAAAWLAGDLLAAFVDGASRVLLINNAGT-VEPIGPLATLDAAAIARAVGLNVAA 112

Query: 141 AKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPN 178
             +LT +L        ++ RIL+ISS        RN  
Sbjct: 113 PLMLTAALAQAASD-AAERRILHISSGAA-----RNAY 144

Length = 243

>gnl|CDD|236399 PRK09186, PRK09186, flagellin modification protein A; Provisional

 Score = 62.3 bits (152), Expect = 2e-11
 Identities = 61/234 (26%), Positives = 95/234 (40%), Gaps = 47/234 (20%)

Query: 29  KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSE--KGLPVNFFQL 86
           K    ++TGA   IG ALVK + E G  VI    D E     +ESL +  K   ++  +L
Sbjct: 3   KGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVEL 62

Query: 87  DVSDPSSIEAFVSWFKSNFAALDILVNNA-------GVSFNDI-YKNTVEHAETVIRTNF 138
           D++D  S+E F+S     +  +D  VN A       G  F D+   +  E+    +  + 
Sbjct: 63  DITDQESLEEFLSKSAEKYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNEN----LSLHL 118

Query: 139 YGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVG 198
             + L ++     F++    + ++NISS  G    V  P                 +F  
Sbjct: 119 GSSFLFSQQFAKYFKKQGGGN-LVNISSIYG----VVAP-----------------KF-- 154

Query: 199 LFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPG 252
                + +GT  S   P    +YA  K  +   T  LAK ++   I VN   PG
Sbjct: 155 ----EIYEGT--SMTSP---VEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPG 199

Length = 256

>gnl|CDD|180771 PRK06947, PRK06947, glucose-1-dehydrogenase; Provisional

 Score = 62.1 bits (151), Expect = 3e-11
 Identities = 65/254 (25%), Positives = 94/254 (37%), Gaps = 62/254 (24%)

Query: 34  IVTGANKGIGFALVKRLAELGLTV-ILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPS 92
           ++TGA++GIG A     A  G +V I  ARD    +   +++   G        DV++ +
Sbjct: 6   LITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEA 65

Query: 93  SIEAFVSWFKSNFAALDILVNNAGV--SFNDIYKNTVEHAETVIRTNFYGAKLLTESLLP 150
            + A     +S F  LD LVNNAG+      +          +  TN  GA L       
Sbjct: 66  DVIAMFDAVQSAFGRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREA-- 123

Query: 151 LFRRSPSKSR------ILNISS---RLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFL 201
              R  S  R      I+N+SS   RLG+                               
Sbjct: 124 --ARRLSTDRGGRGGAIVNVSSIASRLGS------------------------------- 150

Query: 202 QSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG 261
                        P  + DYA SK A++  T+ LAK     G+ VN+  PG  +T +   
Sbjct: 151 -------------PNEYVDYAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHAS 197

Query: 262 QGSHTADEAADVGA 275
            G      AA +GA
Sbjct: 198 GGQ--PGRAARLGA 209

Length = 248

>gnl|CDD|187663 cd09762, HSDL2_SDR_c, human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 61.7 bits (150), Expect = 3e-11
 Identities = 60/277 (21%), Positives = 103/277 (37%), Gaps = 64/277 (23%)

Query: 35  VTGANKGIGFALVKRLAELGLTVILTARDVE----------RGQRAVESLSEKGLPVNFF 84
           +TGA++GIG A+  + A  G  V++ A+  E               +E+   K LP    
Sbjct: 8   ITGASRGIGKAIALKAARDGANVVIAAKTAEPHPKLPGTIYTAAEEIEAAGGKALPC--- 64

Query: 85  QLDVSDPSSIEAFVSWFKSNFAALDILVNNA-GVSFNDIYKNTVEHAETVIRTNFYGAKL 143
            +D+ D   + A V      F  +DILVNNA  +S        ++  + ++  N  G  L
Sbjct: 65  IVDIRDEDQVRAAVEKAVEKFGGIDILVNNASAISLTGTLDTPMKRYDLMMGVNTRGTYL 124

Query: 144 LTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQS 203
            +++ LP  ++S +   ILN+S  L         N+                        
Sbjct: 125 CSKACLPYLKKSKN-PHILNLSPPL---------NLNPK--------------------- 153

Query: 204 VKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFT-QTSMTQ-- 260
                     W +  T Y ++K  ++   + +A+ ++  GI+VN+  P     T+     
Sbjct: 154 ----------WFKNHTAYTMAKYGMSMCVLGMAEEFKPGGIAVNALWPRTAIATAAMNML 203

Query: 261 -----GQGSHTADEAADVGARLLLLHPQQLPTAKFYI 292
                       +  AD  A  +L  P    T  F I
Sbjct: 204 GGVDVAACCRKPEIMAD-AAYAILTKPSSEFTGNFLI 239

This subgroup includes human HSDL2 and related protens. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|187636 cd08931, SDR_c9, classical (c) SDR, subgroup 9

 Score = 61.7 bits (150), Expect = 3e-11
 Identities = 56/248 (22%), Positives = 85/248 (34%), Gaps = 54/248 (21%)

Query: 35  VTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSI 94
           +TGA  GIG       A  G  V L   D E G  A+ +       V    LDV+D ++ 
Sbjct: 5   ITGAASGIGRETALLFARNGWFVGLYDID-EDGLAALAAELGAE-NVVAGALDVTDRAAW 62

Query: 95  EAFVSWFKSNFAA-LDILVNNAGVS----FNDIYKNTVEHAETVIRTNFYGAKLLTESLL 149
            A ++ F +     LD L NNAGV     F D+    +   + ++  N  G      + L
Sbjct: 63  AAALADFAAATGGRLDALFNNAGVGRGGPFEDV---PLAAHDRMVDINVKGVLNGAYAAL 119

Query: 150 PLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTW 209
           P  + +P  +R++N +S                                           
Sbjct: 120 PYLKATPG-ARVINTASSSAIY-------------------------------------- 140

Query: 210 KSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTADE 269
              G P++   Y+ +K A+   T  L   +   GI V    P F  T +    G   A  
Sbjct: 141 ---GQPDLAV-YSATKFAVRGLTEALDVEWARHGIRVADVWPWFVDTPILTK-GETGAAP 195

Query: 270 AADVGARL 277
              +G  L
Sbjct: 196 KKGLGRVL 203

This subgroup has the canonical active site tetrad and NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 227

>gnl|CDD|187664 cd09763, DHRS1-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) -like, classical (c) SDRs

 Score = 61.7 bits (150), Expect = 5e-11
 Identities = 62/270 (22%), Positives = 91/270 (33%), Gaps = 79/270 (29%)

Query: 29  KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAV----ESLSEKGLPVNFF 84
              IA+VTGA++GIG  +  +L E G TV +T R +           E+   K +PV   
Sbjct: 2   SGKIALVTGASRGIGRGIALQLGEAGATVYITGRTILPQLPGTAEEIEARGGKCIPV--- 58

Query: 85  QLDVSDPSSIEAFVSWFKSNF-AALDILVNNA----GVSFNDIYKNTVEHAETV------ 133
           + D SD   +EA            LDILVNNA     +    + K   E   T+      
Sbjct: 59  RCDHSDDDEVEALFERVAREQQGRLDILVNNAYAAVQLILVGVAKPFWEEPPTIWDDINN 118

Query: 134 --IR----TNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEE 187
             +R     + Y A L+             K  I+ ISS  G L  + N           
Sbjct: 119 VGLRAHYACSVYAAPLM---------VKAGKGLIVIISS-TGGLEYLFNVA--------- 159

Query: 188 LSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVN 247
                                            Y V K A++     +A   +  G++V 
Sbjct: 160 ---------------------------------YGVGKAAIDRMAADMAHELKPHGVAVV 186

Query: 248 SYCPGFTQTSMTQGQGSHTADEAADVGARL 277
           S  PGF +T +         D+     A+ 
Sbjct: 187 SLWPGFVRTELVL---EMPEDDEGSWHAKE 213

This subgroup includes human DHRS1 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 265

>gnl|CDD|180408 PRK06114, PRK06114, short chain dehydrogenase; Provisional

 Score = 61.0 bits (148), Expect = 7e-11
 Identities = 59/229 (25%), Positives = 88/229 (38%), Gaps = 43/229 (18%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERG-QRAVESLSEKGLPVNFFQLDVSD 90
           +A VTGA  GIG  +   LA+ G  V L     + G     E +   G        DV+ 
Sbjct: 10  VAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTS 69

Query: 91  PSSIEAFVSWFKSNFAALDILVNNAGVS-FNDIYKNTVEHAETVIRTNFYGAKLLTESLL 149
            + + A V+  ++   AL + VN AG++  N   +   E  +TV+  N  G  L  ++  
Sbjct: 70  KADLRAAVARTEAELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEA 129

Query: 150 PLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTW 209
                +     I+NI+S  G +                     + R  GL LQ+      
Sbjct: 130 RAMLEN-GGGSIVNIASMSGII---------------------VNR--GL-LQA------ 158

Query: 210 KSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSM 258
                      Y  SK  +   +  LA  + G GI VNS  PG+T T M
Sbjct: 159 ----------HYNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPM 197

Length = 254

>gnl|CDD|171822 PRK12938, PRK12938, acetyacetyl-CoA reductase; Provisional

 Score = 60.8 bits (147), Expect = 7e-11
 Identities = 60/234 (25%), Positives = 99/234 (42%), Gaps = 47/234 (20%)

Query: 30  ETIAIVTGANKGIGFALVKRLAELGLTVIL-TARDVERGQRAVESLSEKGLPVNFFQLDV 88
           + IA VTG   GIG ++ +RL + G  V+     +  R  + +E     G      + +V
Sbjct: 3   QRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNV 62

Query: 89  SDPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIY-KNTVEHAETVIRTNFYGAKLLTES 147
            D  S +A     K+    +D+LVNNAG++ + ++ K T E    VI TN      +T+ 
Sbjct: 63  GDWDSTKAAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQ 122

Query: 148 LLP-LFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKD 206
           ++  +  R     RI+NISS  G                            G F Q    
Sbjct: 123 VIDGMVER--GWGRIINISSVNGQ--------------------------KGQFGQ---- 150

Query: 207 GTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ 260
                       T+Y+ +K  ++ +TM LA+    +G++VN+  PG+  T M +
Sbjct: 151 ------------TNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVK 192

Length = 246

>gnl|CDD|180413 PRK06128, PRK06128, oxidoreductase; Provisional

 Score = 61.4 bits (149), Expect = 7e-11
 Identities = 62/259 (23%), Positives = 96/259 (37%), Gaps = 56/259 (21%)

Query: 33  AIVTGANKGIGFALVKRLAELGLTVILT-----ARDVERGQRAVESLSEKGLPVNFFQLD 87
           A++TGA+ GIG A     A  G  + L       +D     + +++   K + +     D
Sbjct: 58  ALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVAL---PGD 114

Query: 88  VSDPSSIEAFVSWFKSNFAALDILVNNAG--VSFNDIYKNTVEHAETVIRTNFYGAKLLT 145
           + D +     V         LDILVN AG   +  DI   T E  +   +TN Y    L 
Sbjct: 115 LKDEAFCRQLVERAVKELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLC 174

Query: 146 ESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVK 205
           ++ +P     P  + I+N  S                                  +QS +
Sbjct: 175 KAAIPHL---PPGASIINTGS----------------------------------IQSYQ 197

Query: 206 DGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSH 265
                         DYA +K A+ A+T  LAK+   +GI VN+  PG   T + Q  G  
Sbjct: 198 PSP--------TLLDYASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPL-QPSGGQ 248

Query: 266 TADEAADVGARLLLLHPQQ 284
             ++  D G+   +  P Q
Sbjct: 249 PPEKIPDFGSETPMKRPGQ 267

Length = 300

>gnl|CDD|187609 cd05351, XR_like_SDR_c, xylulose reductase-like, classical (c) SDRs

 Score = 60.9 bits (148), Expect = 8e-11
 Identities = 36/135 (26%), Positives = 61/135 (45%), Gaps = 9/135 (6%)

Query: 33  AIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPS 92
           A+VTGA KGIG A VK LA+ G  V+  +R        ++SL  +   +    +D+SD  
Sbjct: 10  ALVTGAGKGIGRATVKALAKAGARVVAVSRTQAD----LDSLVRECPGIEPVCVDLSDWD 65

Query: 93  SIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHA-ETVIRTNFYGAKLLTESLLPL 151
           + E  +     +   +D+LVNNA V+    +    + A +     N      +++ +   
Sbjct: 66  ATEEAL----GSVGPVDLLVNNAAVAILQPFLEVTKEAFDRSFDVNVRAVIHVSQIVARG 121

Query: 152 FRRSPSKSRILNISS 166
                    I+N+SS
Sbjct: 122 MIARGVPGSIVNVSS 136

Members of this subgroup include proteins identified as L-xylulose reductase (XR) and carbonyl reductase; they are members of the SDR family. XR, catalyzes the NADP-dependent reduction of L-xyulose and other sugars. Tetrameric mouse carbonyl reductase is involved in the metabolism of biogenic and xenobiotic carbonyl compounds. This subgroup also includes tetrameric chicken liver D-erythrulose reductase, which catalyzes the reduction of D-erythrulose to D-threitol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 244

>gnl|CDD|171531 PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score = 60.7 bits (147), Expect = 8e-11
 Identities = 57/242 (23%), Positives = 94/242 (38%), Gaps = 47/242 (19%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVI-LTARDVERGQRAVESLSEKGLPVNFFQLDVSD 90
           +AI+TG N G+G  +   LA+ G  ++ +   +    Q  VE+L  K    +F   D+  
Sbjct: 10  VAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRK---FHFITADLIQ 66

Query: 91  PSSIEAFVSWFKSNFAALDILVNNAG-VSFNDIYKNTVEHAETVIRTNFYGAKLLTESLL 149
              I++ VS        +DIL+NNAG +   D+ +   +  + VI  N      L++++ 
Sbjct: 67  QKDIDSIVSQAVEVMGHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVA 126

Query: 150 PLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTW 209
             F +  +  +I+NI+S L     +R P+                               
Sbjct: 127 KQFVKQGNGGKIINIASMLSFQGGIRVPS------------------------------- 155

Query: 210 KSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTADE 269
                      Y  SK A+   T  LA       I+VN+  PG+  T  T    + TA  
Sbjct: 156 -----------YTASKSAVMGLTRALATELSQYNINVNAIAPGYMATDNTAALRADTARN 204

Query: 270 AA 271
            A
Sbjct: 205 EA 206

Length = 251

>gnl|CDD|183719 PRK12747, PRK12747, short chain dehydrogenase; Provisional

 Score = 60.5 bits (146), Expect = 1e-10
 Identities = 61/238 (25%), Positives = 92/238 (38%), Gaps = 53/238 (22%)

Query: 29  KETIAIVTGANKGIGFALVKRLAELG-LTVILTARDVERGQRAVESLSEKGLPVNFFQLD 87
           K  +A+VTGA++GIG A+ KRLA  G L  I      E  +  V  +   G        +
Sbjct: 3   KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGAN 62

Query: 88  VSDPSSIEAFVSWFKSNF------AALDILVNNAGVSFNDIYKNTVEH-AETVIRTNFYG 140
           +     +EA  S   +           DIL+NNAG+      + T E   + ++  N   
Sbjct: 63  LESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKA 122

Query: 141 AKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLF 200
              + +  L   R     SRI+NISS    +S                    +  F+   
Sbjct: 123 PFFIIQQALSRLR---DNSRIINISSAATRIS--------------------LPDFIA-- 157

Query: 201 LQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSM 258
                               Y+++K A+N  T  LAK+    GI+VN+  PGF +T M
Sbjct: 158 --------------------YSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDM 195

Length = 252

>gnl|CDD|187613 cd05355, SDR_c1, classical (c) SDR, subgroup 1

 Score = 60.4 bits (147), Expect = 1e-10
 Identities = 60/262 (22%), Positives = 94/262 (35%), Gaps = 55/262 (20%)

Query: 29  KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVER--GQRAVESLSEKGLPVNFFQL 86
           K   A++TG + GIG A+    A  G  V +     E    +   + + E+G       +
Sbjct: 25  KGKKALITGGDSGIGRAVAIAFAREGADVAINYLPEEEDDAEETKKLIEEEG--RKCLLI 82

Query: 87  --DVSDPSSIEAFVSWFKSNFAALDILVNNAGVSF--NDIYKNTVEHAETVIRTNFYGAK 142
             D+ D S     V      F  LDILVNNA        I   T E  E   RTN +   
Sbjct: 83  PGDLGDESFCRDLVKEVVKEFGKLDILVNNAAYQHPQESIEDITTEQLEKTFRTNIFSMF 142

Query: 143 LLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQ 202
            LT++ LP        S I+N +S                          +  + G    
Sbjct: 143 YLTKAALPHL---KKGSSIINTTS--------------------------VTAYKG---- 169

Query: 203 SVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ 262
                            DYA +K A+ A+T  L+ +   +GI VN+  PG   T +    
Sbjct: 170 ------------SPHLLDYAATKGAIVAFTRGLSLQLAEKGIRVNAVAPGPIWTPLIPSS 217

Query: 263 GSHTADEAADVGARLLLLHPQQ 284
                ++ ++ G+++ +    Q
Sbjct: 218 FP--EEKVSEFGSQVPMGRAGQ 237

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 270

>gnl|CDD|181126 PRK07806, PRK07806, short chain dehydrogenase; Provisional

 Score = 60.1 bits (146), Expect = 1e-10
 Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 1/87 (1%)

Query: 30  ETIAIVTGANKGIGFALVKRLAELGLTVILTARD-VERGQRAVESLSEKGLPVNFFQLDV 88
              A+VTG+++GIG    K LA  G  V++  R    R  + V  +   G   +    D+
Sbjct: 6   GKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADL 65

Query: 89  SDPSSIEAFVSWFKSNFAALDILVNNA 115
           +D  S+ A +   +  F  LD LV NA
Sbjct: 66  TDEESVAALMDTAREEFGGLDALVLNA 92

Length = 248

>gnl|CDD|177654 PLN00015, PLN00015, protochlorophyllide reductase

 Score = 60.5 bits (147), Expect = 2e-10
 Identities = 47/142 (33%), Positives = 70/142 (49%), Gaps = 19/142 (13%)

Query: 34  IVTGANKGIGFALVKRLAELG-LTVILTARDVERGQRAVESLSEKGLPVNFF---QLDVS 89
           I+TGA+ G+G A  K LAE G   V++  RD  + +RA +S    G+P + +    LD++
Sbjct: 1   IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSA---GMPKDSYTVMHLDLA 57

Query: 90  DPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKN-------TVEHAETVIRTNFYGAK 142
              S+  FV  F+ +   LD+LV NA V     Y         T +  E  + TN  G  
Sbjct: 58  SLDSVRQFVDNFRRSGRPLDVLVCNAAV-----YLPTAKEPTFTADGFELSVGTNHLGHF 112

Query: 143 LLTESLLPLFRRSPSKSRILNI 164
           LL+  LL   ++S   S+ L I
Sbjct: 113 LLSRLLLDDLKKSDYPSKRLII 134

Length = 308

>gnl|CDD|236216 PRK08277, PRK08277, D-mannonate oxidoreductase; Provisional

 Score = 59.9 bits (146), Expect = 2e-10
 Identities = 61/267 (22%), Positives = 91/267 (34%), Gaps = 78/267 (29%)

Query: 29  KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDV 88
           K  +A++TG    +G A+ K LA  G  V +  R+ E+ +  V  +   G      + DV
Sbjct: 9   KGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADV 68

Query: 89  SDPSSIEAFVSWFKSNFAALDILVNNAG-------------------VSFNDIYKNTVEH 129
            D  S+E        +F   DIL+N AG                    +F D+ +   E 
Sbjct: 69  LDKESLEQARQQILEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEF 128

Query: 130 AETVIRTNFYGAKLLTESLLPLF--RRSPSKSRILNISSRLG--TLSKVRNPNIKSILED 185
              V   N  G  L T+        R+  +   I+NISS      L+KV           
Sbjct: 129 ---VFDLNLLGTLLPTQVFAKDMVGRKGGN---IINISSMNAFTPLTKV----------- 171

Query: 186 EELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGIS 245
                                              Y+ +K A++ +T  LA  +   GI 
Sbjct: 172 -----------PA----------------------YSAAKAAISNFTQWLAVHFAKVGIR 198

Query: 246 VNSYCPGFTQTS-----MTQGQGSHTA 267
           VN+  PGF  T      +    GS T 
Sbjct: 199 VNAIAPGFFLTEQNRALLFNEDGSLTE 225

Length = 278

>gnl|CDD|236145 PRK08063, PRK08063, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 58.6 bits (142), Expect = 4e-10
 Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 1/85 (1%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILT-ARDVERGQRAVESLSEKGLPVNFFQLDVSD 90
           +A+VTG+++GIG A+  RLAE G  + +  AR  +  +   E +   G      + +V D
Sbjct: 6   VALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGD 65

Query: 91  PSSIEAFVSWFKSNFAALDILVNNA 115
              I+   +     F  LD+ VNNA
Sbjct: 66  VEKIKEMFAQIDEEFGRLDVFVNNA 90

Length = 250

>gnl|CDD|181120 PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 59.4 bits (144), Expect = 4e-10
 Identities = 63/252 (25%), Positives = 97/252 (38%), Gaps = 58/252 (23%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSE---KGLPVNFFQLDV 88
           +A+VTGA  G+G A    LA LG TV++   DV     A + L E    G        D+
Sbjct: 14  VAVVTGAAAGLGRAEALGLARLGATVVVN--DVASALDASDVLDEIRAAGAKAVAVAGDI 71

Query: 89  SDPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKN-TVEHAETVIRTNFYGAKLLTES 147
           S  ++ +  V+        LDI+VNNAG++ + +  N + E  + VI  +  G  LLT +
Sbjct: 72  SQRATADELVA-TAVGLGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRN 130

Query: 148 LLPLFRRSPSKS-------RILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLF 200
               + R+ +K+       RI+N SS  G +  V   N                      
Sbjct: 131 -AAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGPVGQAN---------------------- 167

Query: 201 LQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ 260
                               Y  +K  + A T+  A+     G+  N+ CP   +T+MT 
Sbjct: 168 --------------------YGAAKAGITALTLSAARALGRYGVRANAICPR-ARTAMTA 206

Query: 261 GQGSHTADEAAD 272
                  D  A 
Sbjct: 207 DVFGDAPDVEAG 218

Length = 306

>gnl|CDD|181349 PRK08278, PRK08278, short chain dehydrogenase; Provisional

 Score = 58.8 bits (143), Expect = 5e-10
 Identities = 38/148 (25%), Positives = 63/148 (42%), Gaps = 23/148 (15%)

Query: 33  AIVTGANKGIGFALVKRLAELGLTVILTARDVE----------RGQRAVESLSEKGLPVN 82
             +TGA++GIG A+  R A  G  +++ A+  E               +E+   + LP+ 
Sbjct: 9   LFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPL- 67

Query: 83  FFQLDVSDPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAET-----VIRTN 137
               DV D   + A V+     F  +DI VNNA      I     E         + + N
Sbjct: 68  --VGDVRDEDQVAAAVAKAVERFGGIDICVNNASA----INLTGTEDTPMKRFDLMQQIN 121

Query: 138 FYGAKLLTESLLPLFRRSPSKSRILNIS 165
             G  L++++ LP  ++S +   IL +S
Sbjct: 122 VRGTFLVSQACLPHLKKSEN-PHILTLS 148

Length = 273

>gnl|CDD|187641 cd08936, CR_SDR_c, Porcine peroxisomal carbonyl reductase like, classical (c) SDR

 Score = 58.3 bits (141), Expect = 5e-10
 Identities = 38/121 (31%), Positives = 66/121 (54%), Gaps = 2/121 (1%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           +A+VT +  GIG A+ +RLA+ G  V++++R  +   RAV +L  +GL V      V   
Sbjct: 12  VALVTASTDGIGLAIARRLAQDGAHVVVSSRKQQNVDRAVATLQGEGLSVTGTVCHVGKA 71

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVS--FNDIYKNTVEHAETVIRTNFYGAKLLTESLL 149
              E  V+   +    +DILV+NA V+  F +I  +T E  + ++  N     L+T++++
Sbjct: 72  EDRERLVATAVNLHGGVDILVSNAAVNPFFGNILDSTEEVWDKILDVNVKATALMTKAVV 131

Query: 150 P 150
           P
Sbjct: 132 P 132

This subgroup contains porcine peroxisomal carbonyl reductase and similar proteins. The porcine enzyme efficiently reduces retinals. This subgroup also includes human dehydrogenase/reductase (SDR family) member 4 (DHRS4), and human DHRS4L1. DHRS4 is a peroxisomal enzyme with 3beta-hydroxysteroid dehydrogenase activity; it catalyzes the reduction of 3-keto-C19/C21-steroids into 3beta-hydroxysteroids more efficiently than it does the retinal reduction. The human DHRS4 gene cluster contains DHRS4, DHRS4L2 and DHRS4L1. DHRS4L2 and DHRS4L1 are paralogs of DHRS4, DHRS4L2 being the most recent member. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|187642 cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase (DHB DH)-like, classical (c) SDR

 Score = 58.3 bits (141), Expect = 6e-10
 Identities = 55/232 (23%), Positives = 87/232 (37%), Gaps = 58/232 (25%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           + +VTGA +GIG  + +RLA  G  V+L  R  E     +  +   G   +    D+   
Sbjct: 6   VVVVTGAAQGIGRGVAERLAGEGARVLLVDRS-ELVHEVLAEILAAGDAAHVHTADLETY 64

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEH--AETV---IRTNFYGAKLLTE 146
           +  +  V      F  +D+L+NN G     I+    EH   E +   IR + +       
Sbjct: 65  AGAQGVVRAAVERFGRVDVLINNVG---GTIWAKPYEHYEEEQIEAEIRRSLFPTLWCCR 121

Query: 147 SLLP--LFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSV 204
           ++LP  L R+      I+N+SS + T    R P                           
Sbjct: 122 AVLPHMLERQQ---GVIVNVSS-IATRGIYRIP--------------------------- 150

Query: 205 KDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQT 256
                           Y+ +K  +NA T  LA  +  +GI VN+  PG T+ 
Sbjct: 151 ----------------YSAAKGGVNALTASLAFEHARDGIRVNAVAPGGTEA 186

DHB DH (aka 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase) catalyzes the NAD-dependent conversion of 1,2-dihydroxycyclohexa-3,4-diene carboxylate to a catechol. This subgroup also contains Pseudomonas putida F1 CmtB, 2,3-dihydroxy-2,3-dihydro-p-cumate dehydrogenase, the second enzyme in the pathway for catabolism of p-cumate catabolism. This subgroup shares the glycine-rich NAD-binding motif of the classical SDRs and shares the same catalytic triad; however, the upstream Asn implicated in cofactor binding or catalysis in other SDRs is generally substituted by a Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|235693 PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 58.2 bits (141), Expect = 7e-10
 Identities = 57/233 (24%), Positives = 86/233 (36%), Gaps = 50/233 (21%)

Query: 29  KETIAIVTGANKGIGFALVKRLAELGLTVILTA-RDVERGQRAVESLSEKGLPVNFFQLD 87
           K+ + +VTG+ +GIG A+  RLA+ G  V++ A +  E     ++ + E G        D
Sbjct: 5   KDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLAD 64

Query: 88  VSDPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEH-AETVIRTNFYGAKLLTE 146
           VS     E         +   DILVNNAG+     + N  +   +  I T+F      ++
Sbjct: 65  VSTREGCETLAKATIDRYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQ 124

Query: 147 SLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKD 206
            L    R   +   I+NI+S  G                       I    GL +     
Sbjct: 125 ELAKEMREGGA---IVNIASVAG-----------------------IRPAYGLSI----- 153

Query: 207 GTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYE-GEGISVNSYCPGFTQTSM 258
                         Y   K A+   T  LA   E    I VN+  PGF +T +
Sbjct: 154 --------------YGAMKAAVINLTKYLA--LELAPKIRVNAIAPGFVKTKL 190

Length = 252

>gnl|CDD|180822 PRK07069, PRK07069, short chain dehydrogenase; Validated

 Score = 57.4 bits (139), Expect = 1e-09
 Identities = 50/142 (35%), Positives = 68/142 (47%), Gaps = 13/142 (9%)

Query: 33  AIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAV--ESLSEKGLPVNF-FQLDVS 89
           A +TGA  G+G A+ +R+AE G  V LT  +   G  A   E  +  G  V F    DV+
Sbjct: 2   AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVT 61

Query: 90  DPSSIEAFVSWFKSNFAALDILVNNAGV-SFNDIYKNTVEHAETVIRTN----FYGAKLL 144
           D +  +A ++        L +LVNNAGV SF  I +  ++    V+  N    F G K  
Sbjct: 62  DEAQWQALLAQAADAMGGLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCK-- 119

Query: 145 TESLLPLFRRSPSKSRILNISS 166
               LP  R S   S I+NISS
Sbjct: 120 --HALPYLRASQPAS-IVNISS 138

Length = 251

>gnl|CDD|180766 PRK06940, PRK06940, short chain dehydrogenase; Provisional

 Score = 57.0 bits (138), Expect = 2e-09
 Identities = 72/292 (24%), Positives = 119/292 (40%), Gaps = 60/292 (20%)

Query: 28  SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLD 87
            KE + +V GA  GIG A+ +R+   G  V+L   + E  + A ++L E G  V+  ++D
Sbjct: 1   MKEVV-VVIGAG-GIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVD 57

Query: 88  VSDPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTES 147
           VS   S++A  +        +  LV+ AGVS       +    E +++ + YG  L+ E 
Sbjct: 58  VSSRESVKALAA-TAQTLGPVTGLVHTAGVS------PSQASPEAILKVDLYGTALVLEE 110

Query: 148 LLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGL-FLQSVKD 206
              +   +P  + ++ I+S+ G     R P + +  ++  L+    E  + L FLQ    
Sbjct: 111 FGKVI--APGGAGVV-IASQSGH----RLPAL-TAEQERALATTPTEELLSLPFLQ---- 158

Query: 207 GTWKSQGWPEIWTD----YAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ-- 260
                   P+   D    Y ++K A     M  A ++   G  +NS  PG   T + Q  
Sbjct: 159 --------PDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDE 210

Query: 261 -----GQGSH------------TADEAADVGARLLLLHPQQLPTAKFYIGLD 295
                G G              T DE A +     L+ P+      F  G D
Sbjct: 211 LNGPRGDGYRNMFAKSPAGRPGTPDEIAALAE--FLMGPR----GSFITGSD 256

Length = 275

>gnl|CDD|219957 pfam08659, KR, KR domain

 Score = 55.6 bits (135), Expect = 2e-09
 Identities = 31/123 (25%), Positives = 53/123 (43%), Gaps = 5/123 (4%)

Query: 34  IVTGANKGIGFALVKRLAELGL-TVILTARDV---ERGQRAVESLSEKGLPVNFFQLDVS 89
           +VTG   G+G  L + LAE G   ++L +R        +  +  L  +G  V     DVS
Sbjct: 4   LVTGGLGGLGLELARWLAERGARHLVLLSRSGAPDPEAEALLAELEARGAEVTVVACDVS 63

Query: 90  DPSSIEAFVSWFKSNFAALDILVNNAGVS-FNDIYKNTVEHAETVIRTNFYGAKLLTESL 148
           D  ++ A ++  +++   L  +++ AGV     +   T E    V+     GA  L E+ 
Sbjct: 64  DRDAVRALLAEIRADGPPLRGVIHAAGVLRDALLANMTAEDFARVLAPKVTGAWNLHEAT 123

Query: 149 LPL 151
              
Sbjct: 124 RDR 126

This enzymatic domain is part of bacterial polyketide synthases and catalyzes the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 181

>gnl|CDD|181517 PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 56.6 bits (137), Expect = 2e-09
 Identities = 39/160 (24%), Positives = 71/160 (44%), Gaps = 24/160 (15%)

Query: 30  ETIAIVTGANKGIGFALVKRLAELGLTVILT-ARDVERGQRAVESLSEKGLPVNFFQLDV 88
           E   +VTG ++G+G A+ +  A  G  V++   +  +  +   + L ++ + +   Q DV
Sbjct: 5   EQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIAL---QADV 61

Query: 89  SDPSSIEAFVSWFKSNFAA-LDILVNNA--GVSFN--------DIYKNTVEHAETVIRTN 137
           +D   ++A  +    +F   +  +VNNA    SF+        DI   T E  +  +  +
Sbjct: 62  TDREQVQAMFATATEHFGKPITTVVNNALADFSFDGDARKKADDI---TWEDFQQQLEGS 118

Query: 138 FYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNP 177
             GA    ++ LP   R     RI+NI + L      +NP
Sbjct: 119 VKGALNTIQAALPGM-REQGFGRIINIGTNL-----FQNP 152

Length = 253

>gnl|CDD|183489 PRK12384, PRK12384, sorbitol-6-phosphate dehydrogenase; Provisional

 Score = 57.0 bits (138), Expect = 2e-09
 Identities = 34/151 (22%), Positives = 60/151 (39%), Gaps = 3/151 (1%)

Query: 29  KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNF--FQL 86
              +A+V G  + +G  L   LAE G  V +   + E+     + ++ +        F  
Sbjct: 1   MNQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGA 60

Query: 87  DVSDPSSIEAFVSWFKSNFAALDILVNNAGVSF-NDIYKNTVEHAETVIRTNFYGAKLLT 145
           D +   S+ A        F  +D+LV NAG++    I    +   +  ++ N  G  L  
Sbjct: 61  DATSEQSVLALSRGVDEIFGRVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCA 120

Query: 146 ESLLPLFRRSPSKSRILNISSRLGTLSKVRN 176
                L  R   + RI+ I+S+ G +    N
Sbjct: 121 REFSRLMIRDGIQGRIIQINSKSGKVGSKHN 151

Length = 259

>gnl|CDD|180439 PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydrogenase; Provisional

 Score = 56.6 bits (137), Expect = 2e-09
 Identities = 30/88 (34%), Positives = 40/88 (45%), Gaps = 9/88 (10%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           I IVTG + GIG A+VK L   G  V+    D+  G    E+         F   DVS  
Sbjct: 11  IIIVTGGSSGIGLAIVKELLANGANVVNA--DIHGGDGQHENYQ-------FVPTDVSSA 61

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSF 119
             +   V+     F  +D LVNNAG++ 
Sbjct: 62  EEVNHTVAEIIEKFGRIDGLVNNAGINI 89

Length = 266

>gnl|CDD|236210 PRK08267, PRK08267, short chain dehydrogenase; Provisional

 Score = 56.5 bits (137), Expect = 2e-09
 Identities = 61/249 (24%), Positives = 90/249 (36%), Gaps = 54/249 (21%)

Query: 35  VTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSI 94
           +TGA  GIG A     A  G  V     + E G  A+ +    G       LDV+D ++ 
Sbjct: 6   ITGAASGIGRATALLFAAEGWRVGAYDIN-EAGLAALAAELGAGNAWTG-ALDVTDRAAW 63

Query: 95  EAFVSWFKSNFAA-LDILVNNAGV----SFNDIYKNTVEHAETVIRTNFYGAKLLTESLL 149
           +A ++ F +     LD+L NNAG+     F DI    +E  + VI  N  G      + L
Sbjct: 64  DAALADFAAATGGRLDVLFNNAGILRGGPFEDI---PLEAHDRVIDINVKGVLNGAHAAL 120

Query: 150 PLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTW 209
           P  + +P  +R++N SS                                           
Sbjct: 121 PYLKATPG-ARVINTSSASAIY-------------------------------------- 141

Query: 210 KSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGS-HTAD 268
              G P +   Y+ +K A+   T  L   +   GI V    P F  T+M  G  +   A 
Sbjct: 142 ---GQPGLAV-YSATKFAVRGLTEALDLEWRRHGIRVADVMPLFVDTAMLDGTSNEVDAG 197

Query: 269 EAADVGARL 277
               +G RL
Sbjct: 198 STKRLGVRL 206

Length = 260

>gnl|CDD|180617 PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 56.1 bits (136), Expect = 2e-09
 Identities = 39/137 (28%), Positives = 55/137 (40%), Gaps = 22/137 (16%)

Query: 34  IVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSS 93
           ++TGA  GIG A  +     G  V     D +       +         F QLD+SD   
Sbjct: 9   LITGAASGIGLAQARAFLAQGAQVY--GVDKQDKPDLSGNFH-------FLQLDLSDD-- 57

Query: 94  IEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAET----VIRTNFYGAKLLTESLL 149
           +E    W  S    +DIL N AG+   D YK  ++ +      +  TN     LLT + L
Sbjct: 58  LEPLFDWVPS----VDILCNTAGIL--DDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYL 111

Query: 150 PLFRRSPSKSRILNISS 166
           P      S   I+N+ S
Sbjct: 112 PQMLERKS-GIIINMCS 127

Length = 235

>gnl|CDD|187631 cd05373, SDR_c10, classical (c) SDR, subgroup 10

 Score = 55.9 bits (135), Expect = 3e-09
 Identities = 31/114 (27%), Positives = 47/114 (41%), Gaps = 2/114 (1%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVER-GQRAVESLSEKGLPVNFFQLDVSD 90
           +A V GA  G+G A+ +R A  G +V L AR   +     V+ + + G        D  D
Sbjct: 1   VAAVVGAGDGLGAAIARRFAAEGFSVALAARREAKLEALLVDIIRDAGGSAKAVPTDARD 60

Query: 91  PSSIEAFVSWFKSNFAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKL 143
              + A     +     L++LV NAG +    I + T    E V     +G  L
Sbjct: 61  EDEVIALFDLIEEEIGPLEVLVYNAGANVWFPILETTPRVFEKVWEMAAFGGFL 114

This subgroup resembles the classical SDRs, but has an incomplete match to the canonical glycine rich NAD-binding motif and lacks the typical active site tetrad (instead of the critical active site Tyr, it has Phe, but contains the nearby Lys). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 238

>gnl|CDD|183714 PRK12742, PRK12742, oxidoreductase; Provisional

 Score = 55.9 bits (135), Expect = 3e-09
 Identities = 58/237 (24%), Positives = 85/237 (35%), Gaps = 63/237 (26%)

Query: 33  AIVTGANKGIGFALVKRLAELGLTVILT-ARDVERGQR-AVESLSEKGLPVNFFQLDVSD 90
            +V G ++GIG A+V+R    G  V  T A   +  +R A E+ +         Q D +D
Sbjct: 9   VLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETGATA------VQTDSAD 62

Query: 91  PSSIEAFVSWFKSNFAALDILVNNAGVS-FNDIYKNTVEHAETVIRTNF---YGAKLLTE 146
             ++   V        ALDILV NAG++ F D  +   +  + + + N    Y A +   
Sbjct: 63  RDAVIDVV----RKSGALDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAA 118

Query: 147 SLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKD 206
                 R+ P   RI+ I S  G     R P                    G+       
Sbjct: 119 ------RQMPEGGRIIIIGSVNGD----RMP------------------VAGM------- 143

Query: 207 GTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQG 263
                         YA SK AL      LA+ +   GI++N   PG   T      G
Sbjct: 144 ------------AAYAASKSALQGMARGLARDFGPRGITINVVQPGPIDTDANPANG 188

Length = 237

>gnl|CDD|181324 PRK08251, PRK08251, short chain dehydrogenase; Provisional

 Score = 56.1 bits (136), Expect = 3e-09
 Identities = 59/260 (22%), Positives = 92/260 (35%), Gaps = 60/260 (23%)

Query: 29  KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEK--GLPVNFFQL 86
           ++ I I TGA+ G+G  + +  A  G  + L AR  +R +     L  +  G+ V    L
Sbjct: 2   RQKILI-TGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAAL 60

Query: 87  DVSDPSSIEAFVSWFKSNFAALDILVNNAGVS--------FNDIYKNTVEHAETVIRTNF 138
           DV+D   +    + F+     LD ++ NAG+              K T E       TNF
Sbjct: 61  DVNDHDQVFEVFAEFRDELGGLDRVIVNAGIGKGARLGTGKFWANKATAE-------TNF 113

Query: 139 YGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVG 198
             A    E+ + +FR   S   +L ISS    +S VR                       
Sbjct: 114 VAALAQCEAAMEIFREQGSGHLVL-ISS----VSAVR----------------------- 145

Query: 199 LFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSM 258
                         G P +   YA SK  + +    L        I V++  PG+ ++ M
Sbjct: 146 --------------GLPGVKAAYAASKAGVASLGEGLRAELAKTPIKVSTIEPGYIRSEM 191

Query: 259 TQGQGSHTADEAADVGARLL 278
                S       + G + L
Sbjct: 192 NAKAKSTPFMVDTETGVKAL 211

Length = 248

>gnl|CDD|234422 TIGR03971, SDR_subfam_1, oxidoreductase, SDR family

 Score = 56.0 bits (135), Expect = 4e-09
 Identities = 62/272 (22%), Positives = 92/272 (33%), Gaps = 72/272 (26%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVIL----------------TARDVERGQRAVESLS 75
           +A +TGA +G G A   RLA  G  +I                 T  D++   R VE+L 
Sbjct: 5   VAFITGAARGQGRAHAVRLAAEGADIIAIDLCAPLSDYPTYPLATREDLDETARLVEALG 64

Query: 76  EKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDILVNNAGV-SFNDIYKNTVEHAETVI 134
            K L     + DV D + + A V      F  LD++V NAGV S+   ++ + E  +TV+
Sbjct: 65  RKVLA---RKADVRDLAEVRAVVEDGVEQFGRLDVVVANAGVLSYGRSWELSEEQWDTVL 121

Query: 135 RTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIE 194
             N  G     ++++P      +   I+  SS  G                         
Sbjct: 122 DINLTGVWRTCKAVVPHMIERGNGGSIIITSSVAGL------------------------ 157

Query: 195 RFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFT 254
                            +  P +   YA +K  L   T  LA      GI VNS  P   
Sbjct: 158 -----------------KALPGL-AHYAAAKHGLVGLTKTLANELAEYGIRVNSIHPYSV 199

Query: 255 QTSMTQGQGSHTADEAADVGARLLLLHPQQLP 286
            T M             +      L +P+   
Sbjct: 200 DTPMIA----------PEAMREAFLKYPEAAR 221

Members of this protein subfamily are putative oxidoreductases belonging to the larger SDR family. Members of the present subfamily may occur several to a genome and are largely restricted to genomes that contain members of families TIGR03962, TIGR03967, and TIGR03969. Many members have been annotated by homology as carveol dehydrogenases. Length = 265

>gnl|CDD|135631 PRK05867, PRK05867, short chain dehydrogenase; Provisional

 Score = 55.8 bits (134), Expect = 4e-09
 Identities = 47/229 (20%), Positives = 82/229 (35%), Gaps = 41/229 (17%)

Query: 33  AIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPS 92
           A++TGA+ GIG  +     E G  V + AR ++  ++  + +   G  V     DVS   
Sbjct: 12  ALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQ 71

Query: 93  SIEAFVSWFKSNFAALDILVNNAG-VSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPL 151
            + + +    +    +DI V NAG ++   +    +E  + +  TN  G  L  ++    
Sbjct: 72  QVTSMLDQVTAELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKA 131

Query: 152 FRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKS 211
             +      I+N +S  G +  V                                     
Sbjct: 132 MVKQGQGGVIINTASMSGHIINV------------------------------------- 154

Query: 212 QGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ 260
              P+  + Y  SK A+   T  +A       I VNS  PG+  T + +
Sbjct: 155 ---PQQVSHYCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVE 200

Length = 253

>gnl|CDD|236110 PRK07831, PRK07831, short chain dehydrogenase; Provisional

 Score = 55.4 bits (134), Expect = 5e-09
 Identities = 38/145 (26%), Positives = 60/145 (41%), Gaps = 4/145 (2%)

Query: 29  KETIAIVTGA-NKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEK-GL-PVNFFQ 85
              + +VT A   GIG A  +R  E G  V+++     R     + L+ + GL  V    
Sbjct: 16  AGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVV 75

Query: 86  LDVSDPSSIEAFVSWFKSNFAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLL 144
            DV+  + ++A +         LD+LVNNAG+     +   T +    V+     G    
Sbjct: 76  CDVTSEAQVDALIDAAVERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRA 135

Query: 145 TESLLPLFRRSPSKSRILNISSRLG 169
           T + L   R       I+N +S LG
Sbjct: 136 TRAALRYMRARGHGGVIVNNASVLG 160

Length = 262

>gnl|CDD|183797 PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 55.6 bits (134), Expect = 5e-09
 Identities = 63/243 (25%), Positives = 97/243 (39%), Gaps = 59/243 (24%)

Query: 29  KETIAIVTGAN--KGIGFALVKRLAELGLTVILT---ARD------VERGQRAV--ESLS 75
           K  +A+VTG +   GIG A+ K LAE G  +  T   A D      V++ ++    E L 
Sbjct: 5   KNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELL 64

Query: 76  EKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKN-TVEHAETVI 134
           + G+ V+  +LD++   + +  ++          ILVNNA  S N+ + N T E  +   
Sbjct: 65  KNGVKVSSMELDLTQNDAPKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHY 124

Query: 135 RTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIE 194
             N     LL+      F +  S  RI+N++S                            
Sbjct: 125 MVNVRATTLLSSQFARGFDK-KSGGRIINMTSG--------------------------- 156

Query: 195 RFVGLFLQSVKDGTWKSQGWPEIW-TDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGF 253
                          + QG P +    YA +K A++A T  LA      GI+VN+  PG 
Sbjct: 157 ---------------QFQG-PMVGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGP 200

Query: 254 TQT 256
           T T
Sbjct: 201 TDT 203

Length = 256

>gnl|CDD|235713 PRK06139, PRK06139, short chain dehydrogenase; Provisional

 Score = 55.5 bits (134), Expect = 8e-09
 Identities = 43/137 (31%), Positives = 62/137 (45%), Gaps = 7/137 (5%)

Query: 34  IVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSS 93
           ++TGA+ GIG A  +  A  G  ++L ARD E  Q   E     G  V     DV+D   
Sbjct: 11  VITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQ 70

Query: 94  IEAFVSWFKSNFAALDILVNNAGV----SFNDIYKNTVEHAETVIRTNFYGAKLLTESLL 149
           ++A  +   S    +D+ VNN GV     F +     +E  E VI+TN  G      + L
Sbjct: 71  VKALATQAASFGGRIDVWVNNVGVGAVGRFEET---PIEAHEQVIQTNLIGYMRDAHAAL 127

Query: 150 PLFRRSPSKSRILNISS 166
           P+F++      I  IS 
Sbjct: 128 PIFKKQGHGIFINMISL 144

Length = 330

>gnl|CDD|236207 PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 55.2 bits (134), Expect = 1e-08
 Identities = 39/140 (27%), Positives = 66/140 (47%), Gaps = 13/140 (9%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEK--GLPVNFFQLDVS 89
           +A+VTGA +GIG A+ + LA  G  V+    DV     A+ +++ +  G  +    LD++
Sbjct: 212 VALVTGAARGIGAAIAEVLARDGAHVV--CLDVPAAGEALAAVANRVGGTAL---ALDIT 266

Query: 90  DPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHA-ETVIRTNFYGAKLLTESL 148
            P +              LDI+V+NAG++ +    N  E   ++V+  N      +TE+L
Sbjct: 267 APDAPARIAEHLAERHGGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEAL 326

Query: 149 LP--LFRRSPSKSRILNISS 166
           L            RI+ +SS
Sbjct: 327 LAAGALGDGG---RIVGVSS 343

Length = 450

>gnl|CDD|233441 TIGR01500, sepiapter_red, sepiapterin reductase

 Score = 54.1 bits (130), Expect = 1e-08
 Identities = 61/260 (23%), Positives = 98/260 (37%), Gaps = 62/260 (23%)

Query: 31  TIAIVTGANKGIGFA----LVKRLAELGLTVILTARDVERGQRAVESL--SEKGLPVNFF 84
            + +VTGA++G G      L K L   G  ++L+AR+ E  ++    +     GL V   
Sbjct: 1   AVCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRV 60

Query: 85  QLDVSDPSSIEAFVSWF-----KSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFY 139
            LD+   + +E  +              L +L+NNAG +  D+ K  V+ +++    N++
Sbjct: 61  SLDLGAEAGLEQLLKALRELPRPKGLQRL-LLINNAG-TLGDVSKGFVDLSDSTQVQNYW 118

Query: 140 GAKL-----LTESLLPLFRRSPSKSR-ILNISSRLGTLSKVRNPNIKSILEDEELSEEQI 193
              L     LT S+L  F+ SP  +R ++NISS                          I
Sbjct: 119 ALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCA-----------------------I 155

Query: 194 ERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGF 253
           + F G                   W  Y   K A +    VLA   +   + V +Y PG 
Sbjct: 156 QPFKG-------------------WALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGV 196

Query: 254 TQTSMTQGQGSHTADEAADV 273
             T M Q Q    + +    
Sbjct: 197 LDTDMQQ-QVREESVDPDMR 215

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. Length = 256

>gnl|CDD|187591 cd05330, cyclohexanol_reductase_SDR_c, cyclohexanol reductases, including levodione reductase, classical (c) SDRs

 Score = 54.4 bits (131), Expect = 1e-08
 Identities = 57/241 (23%), Positives = 89/241 (36%), Gaps = 55/241 (22%)

Query: 29  KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVN------ 82
           K+ + ++TG   G+G A   RLA+ G  + L    V+  +  +E+     L +       
Sbjct: 2   KDKVVLITGGGSGLGLATAVRLAKEGAKLSL----VDLNEEGLEAAKAALLEIAPDAEVL 57

Query: 83  FFQLDVSDPSSIEAFVSWFKSNFAALDILVNNAGVSF--NDIYKNTVEHAETVIRTNFYG 140
             + DVSD + +EA+V      F  +D   NNAG+    N       +  + V+  N  G
Sbjct: 58  LIKADVSDEAQVEAYVDATVEQFGRIDGFFNNAGIEGKQNLTEDFGADEFDKVVSINLRG 117

Query: 141 AKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLF 200
                E +L + R   S   I+N +S +G +  V N                        
Sbjct: 118 VFYGLEKVLKVMREQGS-GMIVNTAS-VGGIRGVGN------------------------ 151

Query: 201 LQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ 260
            QS                 YA +K  +   T   A  Y   GI +N+  PG   T M +
Sbjct: 152 -QS----------------GYAAAKHGVVGLTRNSAVEYGQYGIRINAIAPGAILTPMVE 194

Query: 261 G 261
           G
Sbjct: 195 G 195

Cyloclohexanol reductases,including (6R)-2,2,6-trimethyl-1,4-cyclohexanedione (levodione) reductase of Corynebacterium aquaticum, catalyze the reversible oxidoreduction of hydroxycyclohexanone derivatives. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family

 Score = 53.8 bits (130), Expect = 2e-08
 Identities = 36/134 (26%), Positives = 58/134 (43%), Gaps = 20/134 (14%)

Query: 33  AIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPS 92
            +VTG    IG  LV+RL + G  VI     + R +R+    + +   + F + D++DP 
Sbjct: 1   ILVTGGTGFIGSHLVRRLLQEGYEVI----VLGRRRRSESLNTGR---IRFHEGDLTDPD 53

Query: 93  SIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLF 152
           ++E  ++         D +++ A  S       + E     IR N     L T  LL   
Sbjct: 54  ALERLLA-----EVQPDAVIHLAAQSGVG---ASFEDPADFIRANV----LGTLRLLEAA 101

Query: 153 RRSPSKSRILNISS 166
           RR+  K R +  SS
Sbjct: 102 RRAGVK-RFVFASS 114

This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233

>gnl|CDD|180753 PRK06924, PRK06924, short chain dehydrogenase; Provisional

 Score = 53.9 bits (130), Expect = 2e-08
 Identities = 36/141 (25%), Positives = 62/141 (43%), Gaps = 10/141 (7%)

Query: 33  AIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPS 92
            I+TG ++G+G A+  +L E G  VI  +R     +   +   +    + F  LD+ D  
Sbjct: 4   VIITGTSQGLGEAIANQLLEKGTHVISISR--TENKELTKLAEQYNSNLTFHSLDLQDVH 61

Query: 93  SIEA-----FVSWFKSNFAALDILVNNAGV--SFNDIYKNTVEHAETVIRTNFYGAKLLT 145
            +E        S  + N +++  L+NNAG+      I K   E   T +  N     +LT
Sbjct: 62  ELETNFNEILSSIQEDNVSSI-HLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILT 120

Query: 146 ESLLPLFRRSPSKSRILNISS 166
            + +   +      R++NISS
Sbjct: 121 STFMKHTKDWKVDKRVINISS 141

Length = 251

>gnl|CDD|135765 PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydrogenase; Validated

 Score = 53.7 bits (129), Expect = 2e-08
 Identities = 47/225 (20%), Positives = 76/225 (33%), Gaps = 43/225 (19%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
            AI+TGA  GIG  +    A  G +V+++  + +     V+ + + G      + D++  
Sbjct: 13  CAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSE 72

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPL 151
             + A   +  S    +DILVNNAG      +   +         N +    L++ + P 
Sbjct: 73  QELSALADFALSKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPE 132

Query: 152 FRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKS 211
             ++     IL I+S         N NI                                
Sbjct: 133 MEKNGGGV-ILTITSMAA-----ENKNIN------------------------------- 155

Query: 212 QGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQT 256
                  T YA SK A +     +A     + I VN   PG   T
Sbjct: 156 ------MTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILT 194

Length = 255

>gnl|CDD|180586 PRK06483, PRK06483, dihydromonapterin reductase; Provisional

 Score = 52.6 bits (127), Expect = 4e-08
 Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 5/82 (6%)

Query: 34  IVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSS 93
           ++TGA + IG AL   L   G  VI++ R       A++ L + G      Q D S  + 
Sbjct: 6   LITGAGQRIGLALAWHLLAQGQPVIVSYRT-HYP--AIDGLRQAGAQC--IQADFSTNAG 60

Query: 94  IEAFVSWFKSNFAALDILVNNA 115
           I AF+   K +   L  +++NA
Sbjct: 61  IMAFIDELKQHTDGLRAIIHNA 82

Length = 236

>gnl|CDD|180343 PRK05993, PRK05993, short chain dehydrogenase; Provisional

 Score = 53.1 bits (128), Expect = 4e-08
 Identities = 47/147 (31%), Positives = 66/147 (44%), Gaps = 18/147 (12%)

Query: 29  KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDV 88
           K +I ++TG + GIG    + L   G  V  T R  E     V +L  +GL    FQLD 
Sbjct: 4   KRSI-LITGCSSGIGAYCARALQSDGWRVFATCRKEED----VAALEAEGLEA--FQLDY 56

Query: 89  SDPSSIEAFVSWFKS-NFAALDILVNN-----AGVSFNDIYKNTVEHAETVIRTNFYGAK 142
           ++P SI A V+     +   LD L NN      G +  D+     E        NF+G  
Sbjct: 57  AEPESIAALVAQVLELSGGRLDALFNNGAYGQPG-AVEDL---PTEALRAQFEANFFGWH 112

Query: 143 LLTESLLPLFRRSPSKSRILNISSRLG 169
            LT  ++P+ R+     RI+  SS LG
Sbjct: 113 DLTRRVIPVMRKQGQ-GRIVQCSSILG 138

Length = 277

>gnl|CDD|187621 cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH), classical (c) SDR

 Score = 52.6 bits (126), Expect = 5e-08
 Identities = 33/139 (23%), Positives = 64/139 (46%), Gaps = 4/139 (2%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
            A++TG+ +GIG A  +     G  V +   ++E  +     +      ++   LDV+D 
Sbjct: 5   TALITGSARGIGRAFAQAYVREGARVAIADINLEAARATAAEIGPAACAIS---LDVTDQ 61

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGV-SFNDIYKNTVEHAETVIRTNFYGAKLLTESLLP 150
           +SI+  V+     + ++DILVNNA +     I   T E  + +   N  G   + +++  
Sbjct: 62  ASIDRCVAALVDRWGSIDILVNNAALFDLAPIVDITRESYDRLFAINVSGTLFMMQAVAR 121

Query: 151 LFRRSPSKSRILNISSRLG 169
                    +I+N++S+ G
Sbjct: 122 AMIAQGRGGKIINMASQAG 140

This bacterial subgroup includes Rhodobacter sphaeroides SDH, and other SDHs. SDH preferentially interconverts D-sorbitol (D-glucitol) and D-fructose, but also interconverts L-iditol/L-sorbose and galactitol/D-tagatose. SDH is NAD-dependent and is a dimeric member of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 254

>gnl|CDD|236173 PRK08177, PRK08177, short chain dehydrogenase; Provisional

 Score = 52.0 bits (125), Expect = 7e-08
 Identities = 27/86 (31%), Positives = 46/86 (53%), Gaps = 7/86 (8%)

Query: 33  AIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPS 92
           A++ GA++G+G  LV RL E G  V  T R  ++      +L      V+  +LD++DP+
Sbjct: 4   ALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQD----TALQALP-GVHIEKLDMNDPA 58

Query: 93  SIEAFVSWFKSNFAALDILVNNAGVS 118
           S++  +   +      D+L  NAG+S
Sbjct: 59  SLDQLLQ--RLQGQRFDLLFVNAGIS 82

Length = 225

>gnl|CDD|235910 PRK07024, PRK07024, short chain dehydrogenase; Provisional

 Score = 51.9 bits (125), Expect = 8e-08
 Identities = 35/116 (30%), Positives = 54/116 (46%), Gaps = 13/116 (11%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
              +TGA+ GIG AL +  A  G T+ L AR  +  Q     L  K   V+ +  DV D 
Sbjct: 4   KVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARL-PKAARVSVYAADVRDA 62

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTV-EHAE------TVIRTNFYG 140
            ++ A  + F +     D+++ NAG+S       T+ E  E       V+ TN++G
Sbjct: 63  DALAAAAADFIAAHGLPDVVIANAGIS-----VGTLTEEREDLAVFREVMDTNYFG 113

Length = 257

>gnl|CDD|235633 PRK05872, PRK05872, short chain dehydrogenase; Provisional

 Score = 51.9 bits (125), Expect = 1e-07
 Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 5/88 (5%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQL--DVS 89
           + +VTGA +GIG  L +RL   G  + L   +          L   G       +  DV+
Sbjct: 11  VVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAEL---GGDDRVLTVVADVT 67

Query: 90  DPSSIEAFVSWFKSNFAALDILVNNAGV 117
           D ++++A        F  +D++V NAG+
Sbjct: 68  DLAAMQAAAEEAVERFGGIDVVVANAGI 95

Length = 296

>gnl|CDD|166421 PLN02780, PLN02780, ketoreductase/ oxidoreductase

 Score = 51.8 bits (124), Expect = 1e-07
 Identities = 41/143 (28%), Positives = 71/143 (49%), Gaps = 14/143 (9%)

Query: 33  AIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPS 92
           A+VTG   GIG     +LA  GL ++L AR+ ++ +   +S+  K        + V    
Sbjct: 56  ALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSG 115

Query: 93  SIEAFVSWFKSNFAALD--ILVNNAGVS------FNDIYKNTVEHAETVIRTNFYGAKLL 144
            I+  V   K     LD  +L+NN GVS      F+++ +  +++   +I+ N  G   +
Sbjct: 116 DIDEGVKRIKETIEGLDVGVLINNVGVSYPYARFFHEVDEELLKN---LIKVNVEGTTKV 172

Query: 145 TESLLP-LFRRSPSKSRILNISS 166
           T+++LP + +R   K  I+NI S
Sbjct: 173 TQAVLPGMLKR--KKGAIINIGS 193

Length = 320

>gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 51.5 bits (123), Expect = 2e-07
 Identities = 47/222 (21%), Positives = 68/222 (30%), Gaps = 52/222 (23%)

Query: 34  IVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSS 93
           +VTG    IG  LV+RL   G  V    R  +     +         V F  LD++D   
Sbjct: 4   LVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLLS-------GVEFVVLDLTDRDL 56

Query: 94  IEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFR 153
           ++             D +++ A  S               +  N  G    T +LL   R
Sbjct: 57  VDELAKGVP------DAVIHLAAQSSVPDSNA--SDPAEFLDVNVDG----TLNLLEAAR 104

Query: 154 RSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQG 213
            +  K R +  SS     S V       +  DE+L   +                     
Sbjct: 105 AAGVK-RFVFASSV----SVVYGDP-PPLPIDEDLGPPRPL------------------- 139

Query: 214 WPEIWTDYAVSKLALNAYTMVLAKRYEGEGISV---NSYCPG 252
                  Y VSKLA        A+ Y    + +   N Y PG
Sbjct: 140 -----NPYGVSKLAAEQLLRAYARLYGLPVVILRPFNVYGPG 176

Length = 314

>gnl|CDD|169556 PRK08703, PRK08703, short chain dehydrogenase; Provisional

 Score = 50.3 bits (120), Expect = 2e-07
 Identities = 37/135 (27%), Positives = 64/135 (47%), Gaps = 6/135 (4%)

Query: 34  IVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLP----VNFFQLDVS 89
           +VTGA++G+G  + K  A  G TVIL AR  ++ ++  +++ E G P    + F  +   
Sbjct: 10  LVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAE 69

Query: 90  DPSSIEAFVSWFKSNFAALDILVNNAG--VSFNDIYKNTVEHAETVIRTNFYGAKLLTES 147
           +    +   +  ++    LD +V+ AG   + + +   TV       R N      LT +
Sbjct: 70  EKEFEQFAATIAEATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRA 129

Query: 148 LLPLFRRSPSKSRIL 162
           L PL ++SP  S I 
Sbjct: 130 LFPLLKQSPDASVIF 144

Length = 239

>gnl|CDD|169390 PRK08340, PRK08340, glucose-1-dehydrogenase; Provisional

 Score = 50.6 bits (121), Expect = 3e-07
 Identities = 27/85 (31%), Positives = 49/85 (57%), Gaps = 5/85 (5%)

Query: 34  IVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSS 93
           +VT +++GIGF + + L + G  V++++R+ E  ++A++ L E G  V   + D+SD   
Sbjct: 4   LVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYG-EVYAVKADLSDKDD 62

Query: 94  IEAFV--SWFKSNFAALDILVNNAG 116
           ++  V  +W       +D LV NAG
Sbjct: 63  LKNLVKEAW--ELLGGIDALVWNAG 85

Length = 259

>gnl|CDD|235813 PRK06482, PRK06482, short chain dehydrogenase; Provisional

 Score = 50.5 bits (121), Expect = 3e-07
 Identities = 46/151 (30%), Positives = 70/151 (46%), Gaps = 19/151 (12%)

Query: 24  TKWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEK-GLPVN 82
           +K W       +TGA+ G G  + +RL   G  V  T R  +    A++ L  + G  + 
Sbjct: 2   SKTW------FITGASSGFGRGMTERLLARGDRVAATVRRPD----ALDDLKARYGDRLW 51

Query: 83  FFQLDVSDPSSIEAFVSWFKSNFAAL---DILVNNAGVS-FNDIYKNTVEHAETVIRTNF 138
             QLDV+D +++ A V      FAAL   D++V+NAG   F    + +       I TN 
Sbjct: 52  VLQLDVTDSAAVRAVVD---RAFAALGRIDVVVSNAGYGLFGAAEELSDAQIRRQIDTNL 108

Query: 139 YGAKLLTESLLPLFRRSPSKSRILNISSRLG 169
            G+  +  + LP  RR     RI+ +SS  G
Sbjct: 109 IGSIQVIRAALPHLRRQ-GGGRIVQVSSEGG 138

Length = 276

>gnl|CDD|236056 PRK07576, PRK07576, short chain dehydrogenase; Provisional

 Score = 50.3 bits (121), Expect = 3e-07
 Identities = 24/87 (27%), Positives = 39/87 (44%)

Query: 33  AIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPS 92
            +V G   GI   + +  A  G  V + +R  E+   AV  L + G        DV D +
Sbjct: 12  VVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYA 71

Query: 93  SIEAFVSWFKSNFAALDILVNNAGVSF 119
           ++EA  +     F  +D+LV+ A  +F
Sbjct: 72  AVEAAFAQIADEFGPIDVLVSGAAGNF 98

Length = 264

>gnl|CDD|181605 PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrogenase; Validated

 Score = 49.9 bits (119), Expect = 5e-07
 Identities = 48/230 (20%), Positives = 88/230 (38%), Gaps = 45/230 (19%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           +A+VTG + G+G  +   LAE G  ++    ++      +E ++  G        D+   
Sbjct: 12  VAVVTGCDTGLGQGMALGLAEAGCDIV--GINIVEPTETIEQVTALGRRFLSLTADLRKI 69

Query: 92  SSIEAFVSWFKSNFAALDILVNNAG-VSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLP 150
             I A +    + F  +DILVNNAG +   D  + + +  + V+  N      ++++   
Sbjct: 70  DGIPALLERAVAEFGHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAK 129

Query: 151 LFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWK 210
            F    +  +I+NI+S L     +R P+                                
Sbjct: 130 HFIAQGNGGKIINIASMLSFQGGIRVPS-------------------------------- 157

Query: 211 SQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ 260
                     Y  SK  +   T ++A  +    I+VN+  PG+  T+ TQ
Sbjct: 158 ----------YTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQ 197

Length = 253

>gnl|CDD|181198 PRK08017, PRK08017, oxidoreductase; Provisional

 Score = 49.7 bits (119), Expect = 5e-07
 Identities = 61/244 (25%), Positives = 84/244 (34%), Gaps = 81/244 (33%)

Query: 34  IVTGANKGIGFALVKRLAELGLTVILTAR---DVERGQRAVESLSEKGLPVNFFQLDVSD 90
           ++TG + GIG      L   G  V+   R   DV R    + SL   G+      LD+ D
Sbjct: 6   LITGCSSGIGLEAALELKRRGYRVLAACRKPDDVAR----MNSLGFTGI-----LLDLDD 56

Query: 91  PSSIEAFVSWFKSNFAALDI----------LVNNAGV----SFNDIYKNTVEHAETVIRT 136
           P S+E          AA ++          L NNAG       + I +  +E       T
Sbjct: 57  PESVER---------AADEVIALTDNRLYGLFNNAGFGVYGPLSTISRQQMEQQ---FST 104

Query: 137 NFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERF 196
           NF+G   LT  LLP       + RI+  SS +G +S                        
Sbjct: 105 NFFGTHQLTMLLLPAMLPH-GEGRIVMTSSVMGLIS------------------------ 139

Query: 197 VGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQT 256
                 +   G             YA SK AL A++  L       GI V+   PG  +T
Sbjct: 140 ------TPGRGA------------YAASKYALEAWSDALRMELRHSGIKVSLIEPGPIRT 181

Query: 257 SMTQ 260
             T 
Sbjct: 182 RFTD 185

Length = 256

>gnl|CDD|187656 cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup 2, complex (x) SDRs

 Score = 50.4 bits (121), Expect = 5e-07
 Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 6/89 (6%)

Query: 35  VTGANKGIGFALVKRLAEL-GLTVILTAR-----DVERGQRAVESLSEKGLPVNFFQLDV 88
           VTG   GIG AL + LA   G  ++L  R     + E   + + +L   G  V +   DV
Sbjct: 210 VTGGAGGIGRALARALARRYGARLVLLGRSPLPPEEEWKAQTLAALEALGARVLYISADV 269

Query: 89  SDPSSIEAFVSWFKSNFAALDILVNNAGV 117
           +D +++   +   +  + A+D +++ AGV
Sbjct: 270 TDAAAVRRLLEKVRERYGAIDGVIHAAGV 298

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. This subfamily includes both KR domains of the Bacillus subtilis Pks J,-L, and PksM, and all three KR domains of PksN, components of the megacomplex bacillaene synthase, which synthesizes the antibiotic bacillaene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 436

>gnl|CDD|235608 PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 49.4 bits (118), Expect = 6e-07
 Identities = 47/226 (20%), Positives = 77/226 (34%), Gaps = 53/226 (23%)

Query: 31  TIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSD 90
            +AI+ G ++G+G+A+     + G  V + +R+  + +R  ++LS+ G  +++   DVS 
Sbjct: 7   KVAII-GVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYG-NIHYVVGDVSS 64

Query: 91  PSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHA---ETVIRTNFYGAKLLTES 147
             S    +        A+D LV   G    D    TVE     E ++  +         +
Sbjct: 65  TESARNVIEKAAKVLNAIDGLVVTVGGYVED----TVEEFSGLEEMLTNHIKIPLYAVNA 120

Query: 148 LLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDG 207
            L   +     S I+ +SS  G                                      
Sbjct: 121 SLRFLKEG---SSIVLVSSMSGI-----------------------------------YK 142

Query: 208 TWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGF 253
               Q        YAV+K  L     +LA    G GI VN   P  
Sbjct: 143 ASPDQ------LSYAVAKAGLAKAVEILASELLGRGIRVNGIAPTT 182

Length = 238

>gnl|CDD|235739 PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

 Score = 49.6 bits (119), Expect = 6e-07
 Identities = 27/91 (29%), Positives = 40/91 (43%), Gaps = 3/91 (3%)

Query: 27  WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQL 86
           W    +A++TG   GIG ALV+R    G  V +  R  E+     +   +  L V   + 
Sbjct: 3   WLHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVV---EG 59

Query: 87  DVSDPSSIEAFVSWFKSNFAALDILVNNAGV 117
           DV+  +  +  V      F  LD  V NAG+
Sbjct: 60  DVTSYADNQRAVDQTVDAFGKLDCFVGNAGI 90

Length = 263

>gnl|CDD|180838 PRK07102, PRK07102, short chain dehydrogenase; Provisional

 Score = 49.2 bits (118), Expect = 7e-07
 Identities = 46/140 (32%), Positives = 64/140 (45%), Gaps = 11/140 (7%)

Query: 31  TIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKG-LPVNFFQLDVS 89
            I I+ GA   I  A  +R A  G  + L ARDVER +R  + L  +G + V+  +LD+ 
Sbjct: 3   KILII-GATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDIL 61

Query: 90  DPSSIEAFVSWFKSNFAALDILVNNAG-VSFNDIYKNTVEHAETVIRTNFYGAKLLTESL 148
           D +S  AF+    S  A  DI++   G +      +     A    RTNF G   L   L
Sbjct: 62  DTASHAAFL---DSLPALPDIVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLL 118

Query: 149 LPLF--RRSPSKSRILNISS 166
              F  R S +   I+ ISS
Sbjct: 119 ANRFEARGSGT---IVGISS 135

Length = 243

>gnl|CDD|187583 cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehydrogenase (SDH), classical (c) SDRs

 Score = 48.6 bits (116), Expect = 1e-06
 Identities = 36/140 (25%), Positives = 61/140 (43%), Gaps = 2/140 (1%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQR-AVESLSEKGLPVNFFQLDVSD 90
           +A+V G  + +G  L   LAE G  V +   + E  ++ A E  +E G     F  D ++
Sbjct: 4   VAVVIGGGQTLGEFLCHGLAEAGYDVAVADINSENAEKVADEINAEYGEKAYGFGADATN 63

Query: 91  PSSIEAFVSWFKSNFAALDILVNNAGVS-FNDIYKNTVEHAETVIRTNFYGAKLLTESLL 149
             S+ A        F  +D+LV +AG++    I    +   +  ++ N  G  L      
Sbjct: 64  EQSVIALSKGVDEIFKRVDLLVYSAGIAKSAKITDFELGDFDRSLQVNLVGYFLCAREFS 123

Query: 150 PLFRRSPSKSRILNISSRLG 169
            L  R   + RI+ I+S+ G
Sbjct: 124 KLMIRDGIQGRIIQINSKSG 143

Sorbitol 6-phosphate dehydrogenase (SDH, aka glucitol 6-phosphate dehydrogenase) catalyzes the NAD-dependent interconversion of D-fructose 6-phosphate to D-sorbitol 6-phosphate. SDH is a member of the classical SDRs, with the characteristic catalytic tetrad, but without a complete match to the typical NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|222222 pfam13561, adh_short_C2, Enoyl-(Acyl carrier protein) reductase

 Score = 48.4 bits (116), Expect = 1e-06
 Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 1/82 (1%)

Query: 40  KGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVS 99
             I +A+ K  AE G  V+LT         AV+ L+++ LP +   LDV+    I+    
Sbjct: 6   NSIAWAIAKAAAEEGAEVVLTTWPPALRMGAVDELAKE-LPADVIPLDVTSDEDIDELFE 64

Query: 100 WFKSNFAALDILVNNAGVSFND 121
             K +   +D LV++  +S   
Sbjct: 65  KVKEDGGKIDFLVHSIAMSPEI 86

Length = 239

>gnl|CDD|131680 TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

 Score = 49.1 bits (117), Expect = 1e-06
 Identities = 25/92 (27%), Positives = 48/92 (52%), Gaps = 8/92 (8%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESL-----SEKGLPVNFFQL 86
           +A VTG   GIG    +RLA  G  V+L   ++E  +     +     + + + +   ++
Sbjct: 416 VAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVAL---KM 472

Query: 87  DVSDPSSIEAFVSWFKSNFAALDILVNNAGVS 118
           DV+D  +++A  +     +  +DI+VNNAG++
Sbjct: 473 DVTDEQAVKAAFADVALAYGGVDIVVNNAGIA 504

Length = 676

>gnl|CDD|187611 cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-hydroxyacyl-CoA dehydrogenase-like, classical(c)-like SDRs

 Score = 48.1 bits (115), Expect = 1e-06
 Identities = 53/243 (21%), Positives = 87/243 (35%), Gaps = 63/243 (25%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVIL---------TARDVERGQRAVESLSEKGLPVN 82
           + +VTGA  G+G A     AE G  V++         + +      + V+ +   G    
Sbjct: 7   VVLVTGAGGGLGRAYALAFAERGAKVVVNDLGGDRKGSGKSSSAADKVVDEIKAAGGKA- 65

Query: 83  FFQLDVSDPSSIEAFVSWFKS---NFAALDILVNNAGVSFNDIYKNTVEHA-ETVIRTNF 138
                V++  S+E      K+    F  +DILVNNAG+  +  +    E   + V+R + 
Sbjct: 66  -----VANYDSVEDGEKIVKTAIDAFGRVDILVNNAGILRDRSFAKMSEEDWDLVMRVHL 120

Query: 139 YGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVG 198
            G+  +T +  P  R+     RI+N SS  G                            G
Sbjct: 121 KGSFKVTRAAWPYMRKQ-KFGRIINTSSAAG--------------------------LYG 153

Query: 199 LFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSM 258
            F Q                 +Y+ +KL L   +  LA       I+ N+  P    + M
Sbjct: 154 NFGQ----------------ANYSAAKLGLLGLSNTLAIEGAKYNITCNTIAPA-AGSRM 196

Query: 259 TQG 261
           T+ 
Sbjct: 197 TET 199

Beta oxidation of fatty acids in eukaryotes occurs by a four-reaction cycle, that may take place in mitochondria or in peroxisomes. (3R)-hydroxyacyl-CoA dehydrogenase is part of rat peroxisomal multifunctional MFE-2, it is a member of the NAD-dependent SDRs, but contains an additional small C-terminal domain that completes the active site pocket and participates in dimerization. The atypical, additional C-terminal extension allows for more extensive dimerization contact than other SDRs. MFE-2 catalyzes the second and third reactions of the peroxisomal beta oxidation cycle. Proteins in this subgroup have a typical catalytic triad, but have a His in place of the usual upstream Asn. This subgroup also contains members identified as 17-beta-hydroxysteroid dehydrogenases, including human peroxisomal 17-beta-hydroxysteroid dehydrogenase type 4 (17beta-HSD type 4, aka MFE-2, encoded by HSD17B4 gene) which is involved in fatty acid beta-oxidation and steroid metabolism. This subgroup also includes two SDR domains of the Neurospora crassa and Saccharomyces cerevisiae multifunctional beta-oxidation protein (MFP, aka Fox2). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 250

>gnl|CDD|236229 PRK08303, PRK08303, short chain dehydrogenase; Provisional

 Score = 48.1 bits (115), Expect = 2e-06
 Identities = 28/97 (28%), Positives = 41/97 (42%), Gaps = 18/97 (18%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRA--------------VESLSEK 77
           +A+V GA +G G  +   L   G TV +T R   R +R+              V +   +
Sbjct: 10  VALVAGATRGAGRGIAVELGAAGATVYVTGRST-RARRSEYDRPETIEETAELVTAAGGR 68

Query: 78  GLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDILVNN 114
           G+ V   Q+D   P  + A V         LDILVN+
Sbjct: 69  GIAV---QVDHLVPEQVRALVERIDREQGRLDILVND 102

Length = 305

>gnl|CDD|235914 PRK07041, PRK07041, short chain dehydrogenase; Provisional

 Score = 47.3 bits (113), Expect = 2e-06
 Identities = 29/115 (25%), Positives = 52/115 (45%), Gaps = 12/115 (10%)

Query: 34  IVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSS 93
           +V G + GIG AL +  A  G  V + +R  +R   A  +L     PV    LD++D ++
Sbjct: 1   LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGA-PVRTAALDITDEAA 59

Query: 94  IEAFVSWFKSNFA---ALD-ILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLL 144
           ++AF       FA     D +++  A      +    +  A+  + + F+GA  +
Sbjct: 60  VDAF-------FAEAGPFDHVVITAADTPGGPVRALPLAAAQAAMDSKFWGAYRV 107

Length = 230

>gnl|CDD|181762 PRK09291, PRK09291, short chain dehydrogenase; Provisional

 Score = 47.3 bits (113), Expect = 3e-06
 Identities = 38/142 (26%), Positives = 61/142 (42%), Gaps = 24/142 (16%)

Query: 34  IVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEK----GLPVNFFQLDVS 89
           ++TGA  G G  +  RLA  G  VI       +    V +L  +    GL +   +LD++
Sbjct: 6   LITGAGSGFGREVALRLARKGHNVIAGV----QIAPQVTALRAEAARRGLALRVEKLDLT 61

Query: 90  DPSSIEAFVSWFKSNFAALDILVNNAGV----SFNDIYKNTVEHAETVIRTNFYGAKLLT 145
           D         W       +D+L+NNAG+    +  DI    VE    +  TN +G   LT
Sbjct: 62  DAIDRAQAAEW------DVDVLLNNAGIGEAGAVVDI---PVELVRELFETNVFGPLELT 112

Query: 146 ESLLP-LFRRSPSKSRILNISS 166
           +  +  +  R   K +++  SS
Sbjct: 113 QGFVRKMVAR--GKGKVVFTSS 132

Length = 257

>gnl|CDD|181188 PRK07985, PRK07985, oxidoreductase; Provisional

 Score = 46.9 bits (111), Expect = 5e-06
 Identities = 63/246 (25%), Positives = 90/246 (36%), Gaps = 50/246 (20%)

Query: 33  AIVTGANKGIGFALVKRLAELGLTVILTARDVER--GQRAVESLSEKGLPVNFFQLDVSD 90
           A+VTG + GIG A     A  G  V ++   VE    Q   + + E G        D+SD
Sbjct: 52  ALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSD 111

Query: 91  PSSIEAFVSWFKSNFAALDILVNNAG--VSFNDIYKNTVEHAETVIRTNFYGAKLLTESL 148
                + V         LDI+   AG  V+  DI   T E  +     N +    LT+  
Sbjct: 112 EKFARSLVHEAHKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEA 171

Query: 149 LPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGT 208
           +PL    P  + I+  SS                          I+ +            
Sbjct: 172 IPLL---PKGASIITTSS--------------------------IQAY------------ 190

Query: 209 WKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTAD 268
              Q  P +  DYA +K A+  Y+  LAK+   +GI VN   PG   T++ Q  G  T D
Sbjct: 191 ---QPSPHL-LDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTAL-QISGGQTQD 245

Query: 269 EAADVG 274
           +    G
Sbjct: 246 KIPQFG 251

Length = 294

>gnl|CDD|180669 PRK06720, PRK06720, hypothetical protein; Provisional

 Score = 45.3 bits (107), Expect = 5e-06
 Identities = 38/121 (31%), Positives = 57/121 (47%), Gaps = 3/121 (2%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           +AIVTG   GIG      LA+ G  VI+T  D E GQ  VE ++  G    F   D+   
Sbjct: 18  VAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQ 77

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGV-SFNDIYKNTVEHAETVIRTN--FYGAKLLTESL 148
              +  +S   + F+ +D+L  NAG+   + I+    E+   V+  N  +   K LT S 
Sbjct: 78  GDWQRVISITLNAFSRIDMLFQNAGLYKIDSIFSRQQENDSNVLCINDVWIEIKQLTSSF 137

Query: 149 L 149
           +
Sbjct: 138 M 138

Length = 169

>gnl|CDD|214833 smart00822, PKS_KR, This enzymatic domain is part of bacterial polyketide synthases

 Score = 45.2 bits (108), Expect = 8e-06
 Identities = 33/124 (26%), Positives = 53/124 (42%), Gaps = 7/124 (5%)

Query: 34  IVTGANKGIGFALVKRLAELG-LTVILTAR---DVERGQRAVESLSEKGLPVNFFQLDVS 89
           ++TG   G+G AL + LAE G   ++L +R   D       +  L   G  V     DV+
Sbjct: 4   LITGGLGGLGRALARWLAERGARRLVLLSRSGPDAPGAAALLAELEAAGARVTVVACDVA 63

Query: 90  DPSSIEAFVSWFKSNFAALDILVNNAGVSFND--IYKNTVEHAETVIRTNFYGAKLLTES 147
           D  ++ A ++   +    L  +++ AGV  +D  +   T E    V+     GA  L E 
Sbjct: 64  DRDALAAVLAAIPAVEGPLTGVIHAAGV-LDDGVLASLTPERFAAVLAPKAAGAWNLHEL 122

Query: 148 LLPL 151
              L
Sbjct: 123 TADL 126

It catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 180

>gnl|CDD|187661 cd08958, FR_SDR_e, flavonoid reductase (FR), extended (e) SDRs

 Score = 46.0 bits (110), Expect = 9e-06
 Identities = 26/67 (38%), Positives = 33/67 (49%), Gaps = 8/67 (11%)

Query: 35 VTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVN-----FFQLDVS 89
          VTGA+  IG  LVKRL + G TV  T RD    ++ V  L E  L         F+ D+ 
Sbjct: 3  VTGASGFIGSWLVKRLLQRGYTVRATVRDPG-DEKKVAHLLE--LEGAKERLKLFKADLL 59

Query: 90 DPSSIEA 96
          D  S +A
Sbjct: 60 DYGSFDA 66

This subgroup contains FRs of the extended SDR-type and related proteins. These FRs act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites; they have the characteristic active site triad of the SDRs (though not the upstream active site Asn) and a NADP-binding motif that is very similar to the typical extended SDR motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|169389 PRK08339, PRK08339, short chain dehydrogenase; Provisional

 Score = 45.6 bits (108), Expect = 1e-05
 Identities = 37/125 (29%), Positives = 61/125 (48%), Gaps = 3/125 (2%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESL-SEKGLPVNFFQLDVSD 90
           +A  T ++KGIGF + + LA  G  VIL +R+ E  ++A E + SE  + V++   D++ 
Sbjct: 10  LAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTK 69

Query: 91  PSSIEAFVSWFKSNFAALDILV-NNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLL 149
              +E  V   K N    DI   +  G       + ++E  E  ++   Y A  LT +L+
Sbjct: 70  REDLERTVKELK-NIGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALV 128

Query: 150 PLFRR 154
           P   R
Sbjct: 129 PAMER 133

Length = 263

>gnl|CDD|183772 PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

 Score = 44.9 bits (107), Expect = 2e-05
 Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 1/85 (1%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           + +VTGA +GIG  +  R A  G  V+L  R  E        L   G        D+   
Sbjct: 10  VVVVTGAAQGIGRGVALRAAAEGARVVLVDRS-ELVHEVAAELRAAGGEALALTADLETY 68

Query: 92  SSIEAFVSWFKSNFAALDILVNNAG 116
           +  +A ++     F  +D+L+NN G
Sbjct: 69  AGAQAAMAAAVEAFGRIDVLINNVG 93

Length = 260

>gnl|CDD|187630 cd05372, ENR_SDR, Enoyl acyl carrier protein (ACP) reductase (ENR), divergent SDR

 Score = 44.5 bits (106), Expect = 2e-05
 Identities = 19/82 (23%), Positives = 34/82 (41%), Gaps = 2/82 (2%)

Query: 33  AIVTGA--NKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSD 90
            ++TG   ++ I + + K L E G  +  T +     +R  +     G        DVS+
Sbjct: 4   ILITGIANDRSIAWGIAKALHEAGAELAFTYQPEALRKRVEKLAERLGESALVLPCDVSN 63

Query: 91  PSSIEAFVSWFKSNFAALDILV 112
              I+   +  K ++  LD LV
Sbjct: 64  DEEIKELFAEVKKDWGKLDGLV 85

This bacterial subgroup of ENRs includes Escherichia coli ENR. ENR catalyzes the NAD(P)H-dependent reduction of enoyl-ACP in the last step of fatty acid biosynthesis. De novo fatty acid biosynthesis is catalyzed by the fatty acid synthetase complex, through the serial addition of 2-carbon subunits. In bacteria and plants,ENR catalyzes one of six synthetic steps in this process. Oilseed rape ENR, and also apparently the NADH-specific form of Escherichia coli ENR, is tetrameric. Although similar to the classical SDRs, this group does not have the canonical catalytic tetrad, nor does it have the typical Gly-rich NAD-binding pattern. Such so-called divergent SDRs have a GXXXXXSXA NAD-binding motif and a YXXMXXXK (or YXXXMXXXK) active site motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187606 cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB)-like, classical (c) SDRs

 Score = 44.3 bits (105), Expect = 3e-05
 Identities = 29/92 (31%), Positives = 43/92 (46%), Gaps = 5/92 (5%)

Query: 27  WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESL-SEKGLPVNFFQ 85
           W K  +A++TG   G+G ALV+R    G  V +  R  E+    V  L ++ G  V   +
Sbjct: 1   WLKGEVALITGGGSGLGRALVERFVAEGAKVAVLDRSAEK----VAELRADFGDAVVGVE 56

Query: 86  LDVSDPSSIEAFVSWFKSNFAALDILVNNAGV 117
            DV   +  E  V+     F  LD  + NAG+
Sbjct: 57  GDVRSLADNERAVARCVERFGKLDCFIGNAGI 88

cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB) is a classical SDR, it is of particular importance for its role in the degradation of biphenyl/polychlorinated biphenyls(PCBs); PCBs are a significant source of environmental contamination. This subgroup also includes Pseudomonas putida F1 cis-biphenyl-1,2-dihydrodiol-1,2-dehydrogenase (aka cis-benzene glycol dehydrogenase, encoded by the bnzE gene), which participates in benzene metabolism. In addition it includes Pseudomonas sp. C18 putative 1,2-dihydroxy-1,2-dihydronaphthalene dehydrogenase (aka dibenzothiophene dihydrodiol dehydrogenase, encoded by the doxE gene) which participates in an upper naphthalene catabolic pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|181668 PRK09135, PRK09135, pteridine reductase; Provisional

 Score = 44.1 bits (105), Expect = 3e-05
 Identities = 33/136 (24%), Positives = 58/136 (42%), Gaps = 5/136 (3%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARD--VERGQRAVESLSEKGLPVNFFQLDVS 89
           +A++TG  + IG A+ + L   G  V +       E    A E  + +       Q D+ 
Sbjct: 8   VALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLL 67

Query: 90  DPSSIEAFVSWFKSNFAALDILVNNAGVSF-NDIYKNTVEHAETVIRTNFYGAKLLTESL 148
           DP ++   V+   + F  LD LVNNA   +   +   T    + +  +N      L+++ 
Sbjct: 68  DPDALPELVAACVAAFGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAA 127

Query: 149 LPLFRRSPSKSRILNI 164
            P  R+   +  I+NI
Sbjct: 128 APQLRK--QRGAIVNI 141

Length = 249

>gnl|CDD|236099 PRK07791, PRK07791, short chain dehydrogenase; Provisional

 Score = 44.3 bits (105), Expect = 3e-05
 Identities = 58/257 (22%), Positives = 88/257 (34%), Gaps = 60/257 (23%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVIL---------TARDVERGQRAVESLSEKGLPVN 82
           + IVTGA  GIG A     A  G  V++         +A      Q  V+ +   G    
Sbjct: 8   VVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAV 67

Query: 83  FFQLDVSDPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHA-ETVIRTNFYGA 141
               D++D       V      F  LD+LVNNAG+  + +  N  E   + VI  +  G 
Sbjct: 68  ANGDDIADWDGAANLVDAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKG- 126

Query: 142 KLLTESLLPLFRRSPSK------SRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIER 195
              T      + R+ SK      +RI+N SS  G    V   N                 
Sbjct: 127 HFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQGSVGQGN----------------- 169

Query: 196 FVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQ 255
                                    Y+ +K  + A T+V A      G++VN+  P   +
Sbjct: 170 -------------------------YSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-AR 203

Query: 256 TSMTQGQGSHTADEAAD 272
           T MT+   +    +  +
Sbjct: 204 TRMTETVFAEMMAKPEE 220

Length = 286

>gnl|CDD|236342 PRK08862, PRK08862, short chain dehydrogenase; Provisional

 Score = 42.8 bits (101), Expect = 7e-05
 Identities = 27/87 (31%), Positives = 37/87 (42%), Gaps = 1/87 (1%)

Query: 29  KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDV 88
           K +I ++T A   +G  +    A LG T+IL  +D    +   E  S     V  FQL  
Sbjct: 4   KSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKD 63

Query: 89  SDPSSIEAFVSWFKSNF-AALDILVNN 114
               SI       +  F  A D+LVNN
Sbjct: 64  FSQESIRHLFDAIEQQFNRAPDVLVNN 90

Length = 227

>gnl|CDD|212497 cd11731, Lin1944_like_SDR_c, Lin1944 and related proteins, classical (c) SDRs

 Score = 42.6 bits (101), Expect = 8e-05
 Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 21/87 (24%)

Query: 33  AIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPS 92
            IV GA   IG A+ + L+  G  VI   R    G                +Q+D++D +
Sbjct: 1   IIVIGATGTIGLAVAQLLSAHGHEVITAGRS--SG---------------DYQVDITDEA 43

Query: 93  SIEAFVSWFKSNFAALDILVNNAGVSF 119
           SI+A    F+      D +V+ AG + 
Sbjct: 44  SIKAL---FEK-VGHFDAIVSTAGDAE 66

Lin1944 protein from Listeria Innocua is a classical SDR, it contains a glycine-rich motif similar to the canonical motif of the SDR NAD(P)-binding site. However, the typical SDR active site residues are absent in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 198

>gnl|CDD|223696 COG0623, FabI, Enoyl-[acyl-carrier-protein]

 Score = 42.2 bits (100), Expect = 1e-04
 Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 3/82 (3%)

Query: 33  AIVTG--ANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSD 90
            ++ G   N+ I + + K LAE G  +  T +     +R  E   E G  +     DV++
Sbjct: 9   ILIMGVANNRSIAWGIAKALAEQGAELAFTYQGERLEKRVEELAEELGSDL-VLPCDVTN 67

Query: 91  PSSIEAFVSWFKSNFAALDILV 112
             SI+A  +  K  +  LD LV
Sbjct: 68  DESIDALFATIKKKWGKLDGLV 89

Length = 259

>gnl|CDD|187582 cd05274, KR_FAS_SDR_x, ketoreductase (KR) and fatty acid synthase (FAS), complex (x) SDRs

 Score = 42.4 bits (100), Expect = 2e-04
 Identities = 32/143 (22%), Positives = 57/143 (39%), Gaps = 12/143 (8%)

Query: 34  IVTGANKGIGFALVKRLAELGLT-VILTARDV--ERGQRAVESLSEKGLPVNFFQLDVSD 90
           ++TG   G+G  + + LA  G   ++L +R     R       L   G  V+  + DV+D
Sbjct: 154 LITGGLGGLGLLVARWLAARGARHLVLLSRRGPAPRAAARAALLRAGGARVSVVRCDVTD 213

Query: 91  PSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKN-TVEHAETVIRTNFYGAKLL-TESL 148
           P+++ A ++        L  +++ AGV  + +    T      V+      AK+    +L
Sbjct: 214 PAALAALLAELA-AGGPLAGVIHAAGVLRDALLAELTPAAFAAVLA-----AKVAGALNL 267

Query: 149 LPLFRRSPSKSRILNISSRLGTL 171
             L    P     +  SS    L
Sbjct: 268 HELTPDLPL-DFFVLFSSVAALL 289

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. In some instances, such as porcine FAS, an enoyl reductase (ER) module is inserted between the sub-domains. Fatty acid synthesis occurs via the stepwise elongation of a chain (which is attached to acyl carrier protein, ACP) with 2-carbon units. Eukaryotic systems consist of large, multifunctional synthases (type I) while bacterial, type II systems, use single function proteins. Fungal fatty acid synthase uses a dodecamer of 6 alpha and 6 beta subunits. In mammalian type FAS cycles, ketoacyl synthase forms acetoacetyl-ACP which is reduced by the NADP-dependent beta-KR, forming beta-hydroxyacyl-ACP, which is in turn dehydrated by dehydratase to a beta-enoyl intermediate, which is reduced by NADP-dependent beta-ER. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 375

>gnl|CDD|187564 cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4-hexulose reductase and related proteins, extended (e) SDRs

 Score = 41.8 bits (99), Expect = 2e-04
 Identities = 30/113 (26%), Positives = 45/113 (39%), Gaps = 26/113 (23%)

Query: 35  VTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSI 94
           +TGA   +G ALV+ L E G  VI T R                     F+LD++DP ++
Sbjct: 4   ITGATGMLGRALVRLLKERGYEVIGTGRSRAS----------------LFKLDLTDPDAV 47

Query: 95  EAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVE-HAETVIRTNFYGAKLLTE 146
           E  +  +K      D+++N A  +  D      E   E   R N    + L  
Sbjct: 48  EEAIRDYKP-----DVIINCAAYTRVDK----CESDPELAYRVNVLAPENLAR 91

dTDP-6-deoxy-L-lyxo-4-hexulose reductase, an extended SDR, synthesizes dTDP-L-rhamnose from alpha-D-glucose-1-phosphate, providing the precursor of L-rhamnose, an essential cell wall component of many pathogenic bacteria. This subgroup has the characteristic active site tetrad and NADP-binding motif. This subgroup also contains human MAT2B, the regulatory subunit of methionine adenosyltransferase (MAT); MAT catalyzes S-adenosylmethionine synthesis. The human gene encoding MAT2B encodes two major splicing variants which are induced in human cell liver cancer and regulate HuR, an mRNA-binding protein which stabilizes the mRNA of several cyclins, to affect cell proliferation. Both MAT2B variants include this extended SDR domain. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 280

>gnl|CDD|187554 cd05243, SDR_a5, atypical (a) SDRs, subgroup 5

 Score = 41.1 bits (97), Expect = 2e-04
 Identities = 17/62 (27%), Positives = 25/62 (40%), Gaps = 6/62 (9%)

Query: 35 VTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSI 94
          V GA   +G  +V+ L + G  V    RD  +     E L   G        D++D  S+
Sbjct: 4  VVGATGKVGRHVVRELLDRGYQVRALVRDPSQ----AEKLEAAG--AEVVVGDLTDAESL 57

Query: 95 EA 96
           A
Sbjct: 58 AA 59

This subgroup contains atypical SDRs, some of which are identified as putative NAD(P)-dependent epimerases, one as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is very similar to the extended SDRs, GXXGXXG, and binds NADP. Generally, this subgroup has poor conservation of the active site tetrad; however, individual sequences do contain matches to the YXXXK active site motif, the upstream Ser, and there is a highly conserved Asp in place of the usual active site Asn throughout the subgroup. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 203

>gnl|CDD|187535 cd02266, SDR, Short-chain dehydrogenases/reductases (SDR)

 Score = 41.0 bits (96), Expect = 2e-04
 Identities = 43/229 (18%), Positives = 63/229 (27%), Gaps = 90/229 (39%)

Query: 33  AIVTGANKGIGFALVKRLAELGL-TVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
            +VTG + GIG A+ + LA  G   V++ +R                             
Sbjct: 1   VLVTGGSGGIGGAIARWLASRGSPKVLVVSRR---------------------------- 32

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHA-ETVIRTNFYGAKLLTESLLP 150
                            D++V+NA +  +    +      E  IR N  G + L E+   
Sbjct: 33  -----------------DVVVHNAAILDDGRLIDLTGSRIERAIRANVVGTRRLLEAARE 75

Query: 151 LFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWK 210
           L +      R + ISS                               GLF      G   
Sbjct: 76  LMKAK-RLGRFILISS-----------------------------VAGLFGAPGLGG--- 102

Query: 211 SQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMT 259
                     YA SK AL+      A    G G+   +   G    S  
Sbjct: 103 ----------YAASKAALDGLAQQWASEGWGNGLPATAVACGTWAGSGM 141

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase (KR) domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 186

>gnl|CDD|135637 PRK05876, PRK05876, short chain dehydrogenase; Provisional

 Score = 40.7 bits (95), Expect = 4e-04
 Identities = 32/119 (26%), Positives = 50/119 (42%), Gaps = 1/119 (0%)

Query: 33  AIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPS 92
           A++TG   GIG A     A  G  V+L   D    ++AV  L  +G  V+    DV    
Sbjct: 9   AVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHRE 68

Query: 93  SIEAFVSWFKSNFAALDILVNNAG-VSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLP 150
            +             +D++ +NAG V    I + T +    VI  + +G+    E+ LP
Sbjct: 69  EVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLP 127

Length = 275

>gnl|CDD|187578 cd05269, TMR_SDR_a, triphenylmethane reductase (TMR)-like proteins, NMRa-like, atypical (a) SDRs

 Score = 40.7 bits (96), Expect = 4e-04
 Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 6/62 (9%)

Query: 35 VTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSI 94
          VTGA   +G A+V+ L     +V+   R+ E+ +      +  G  V   Q D  DP ++
Sbjct: 3  VTGATGKLGTAVVELLLAKVASVVALVRNPEKAKA----FAADG--VEVRQGDYDDPETL 56

Query: 95 EA 96
          E 
Sbjct: 57 ER 58

TMR is an atypical NADP-binding protein of the SDR family. It lacks the active site residues of the SDRs but has a glycine rich NAD(P)-binding motif that matches the extended SDRs. Proteins in this subgroup however, are more similar in length to the classical SDRs. TMR was identified as a reducer of triphenylmethane dyes, important environmental pollutants. This subgroup also includes Escherichia coli NADPH-dependent quinine oxidoreductase (QOR2), which catalyzes two-electron reduction of quinone; but is unlikely to play a major role in protecting against quinone cytotoxicity. Atypical SDRs are distinct from classical SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 272

>gnl|CDD|130890 TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-protein) reductase, putative

 Score = 40.3 bits (94), Expect = 6e-04
 Identities = 36/143 (25%), Positives = 66/143 (46%), Gaps = 8/143 (5%)

Query: 34  IVTGANKGIGFALVKRLAELGLTVILTAR-DVERGQRAVESLSEKGLPVNFFQLDVSDPS 92
           +VTGA++GIG A+  RLA  G  + +         +  V ++  +G      Q DV+D  
Sbjct: 2   LVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRV 61

Query: 93  SIEAFVSWFKSNFAALDILVNNAGVSFNDIYKN-TVEHAETVIRTN---FYGAKLLTESL 148
           +    +    +   A   +V NAG++ +  +   + E  + VI TN   FY   ++    
Sbjct: 62  ACRTLLEADIAEHGAYYGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFY--NVIHPCT 119

Query: 149 LPLFRRSPSKSRILNISSRLGTL 171
           +P+  R+    RI+ ++S  G +
Sbjct: 120 MPMI-RARQGGRIITLASVSGVM 141

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|222146 pfam13460, NAD_binding_10, NADH(P)-binding

 Score = 38.8 bits (91), Expect = 0.001
 Identities = 18/82 (21%), Positives = 28/82 (34%), Gaps = 16/82 (19%)

Query: 35  VTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSI 94
           V GA    G  LVK L   G  V   +R+  +              V   Q D+ D + +
Sbjct: 3   VIGATGKTGRRLVKELLARGHQVTALSRNPSKAPAPG---------VTPVQKDLFDLADL 53

Query: 95  EAFVSWFKSNFAALDILVNNAG 116
              ++         D +V+  G
Sbjct: 54  AEALAGV-------DAVVDAFG 68

Length = 182

>gnl|CDD|181417 PRK08416, PRK08416, 7-alpha-hydroxysteroid dehydrogenase; Provisional

 Score = 39.4 bits (92), Expect = 0.001
 Identities = 22/87 (25%), Positives = 45/87 (51%), Gaps = 2/87 (2%)

Query: 34  IVTGANKGIGFALVKRLAELGLTVILT-ARDVERGQRAVESLSEK-GLPVNFFQLDVSDP 91
           +++G  +GIG A+V   A+ G+ +  T   +VE   +  E L +K G+    + L++ +P
Sbjct: 12  VISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEP 71

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVS 118
            + +        +F  +D  ++NA +S
Sbjct: 72  ETYKELFKKIDEDFDRVDFFISNAIIS 98

Length = 260

>gnl|CDD|163279 TIGR03466, HpnA, hopanoid-associated sugar epimerase

 Score = 39.2 bits (92), Expect = 0.002
 Identities = 26/106 (24%), Positives = 47/106 (44%), Gaps = 13/106 (12%)

Query: 33  AIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPS 92
            +VTGA   +G A+V+ L E G  V +  R         +  + +GL V   + D+ DP+
Sbjct: 3   VLVTGATGFVGSAVVRLLLEQGEEVRVLVRP------TSDRRNLEGLDVEIVEGDLRDPA 56

Query: 93  SIEAFVSWFKSNF---AALDILVNNAGVSFNDIYKNTVEHAETVIR 135
           S+   V+  ++ F   A   +   +      ++Y   VE    ++R
Sbjct: 57  SLRKAVAGCRALFHVAADYRLWAPDP----EEMYAANVEGTRNLLR 98

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. This gene and its association with hopene biosynthesis in Zymomonas mobilis has been noted in the literature where the gene symbol hpnA was assigned. Hopanoids are known to be components of the plasma membrane and to have polar sugar head groups in Z. mobilis and other species. Length = 328

>gnl|CDD|181416 PRK08415, PRK08415, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 39.0 bits (91), Expect = 0.002
 Identities = 38/157 (24%), Positives = 69/157 (43%), Gaps = 18/157 (11%)

Query: 39  NKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFV 98
           NK I + + K   E G  +  T  + E  ++ VE ++++      ++LDVS P   ++  
Sbjct: 16  NKSIAYGIAKACFEQGAELAFTYLN-EALKKRVEPIAQELGSDYVYELDVSKPEHFKSLA 74

Query: 99  SWFKSNFAALDILVNNAGVSF-------NDIYKNTVEHAETVIRTNFYGAKLLTESLLPL 151
              K +   +D +V++  V+F           + + E     +  + Y    LT +LLPL
Sbjct: 75  ESLKKDLGKIDFIVHS--VAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPL 132

Query: 152 FRRSPSKSRILNISSRLGTLSKVRNPNI----KSILE 184
                S   +L + S LG +  V + N+    K+ LE
Sbjct: 133 LNDGAS---VLTL-SYLGGVKYVPHYNVMGVAKAALE 165

Length = 274

>gnl|CDD|180949 PRK07370, PRK07370, enoyl-(acyl carrier protein) reductase; Validated

 Score = 38.5 bits (90), Expect = 0.002
 Identities = 31/86 (36%), Positives = 40/86 (46%), Gaps = 8/86 (9%)

Query: 33  AIVTG-ANK-----GIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQL 86
           A+VTG AN      GI   L    AELG+T +   +   R ++ V  L+E   P  F   
Sbjct: 9   ALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKG--RFEKKVRELTEPLNPSLFLPC 66

Query: 87  DVSDPSSIEAFVSWFKSNFAALDILV 112
           DV D + IE      K  +  LDILV
Sbjct: 67  DVQDDAQIEETFETIKQKWGKLDILV 92

Length = 258

>gnl|CDD|133446 cd01078, NAD_bind_H4MPT_DH, NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

 Score = 37.8 bits (88), Expect = 0.002
 Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 1/61 (1%)

Query: 33 AIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPS 92
          A+V G    +G      LA  G  V+L  RD+ER Q+A +SL  +        ++ SD +
Sbjct: 31 AVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFG-EGVGAVETSDDA 89

Query: 93 S 93
          +
Sbjct: 90 A 90

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an alpha-beta-alpha configuration. NAD binding involves numerous hydrogen and van der Waals contacts. Length = 194

>gnl|CDD|236207 PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 38.7 bits (91), Expect = 0.003
 Identities = 16/41 (39%), Positives = 22/41 (53%)

Query: 219 TDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMT 259
           T+YA SK  +      LA      GI++N+  PGF +T MT
Sbjct: 354 TNYAASKAGVIGLVQALAPLLAERGITINAVAPGFIETQMT 394

Length = 450

>gnl|CDD|236389 PRK09134, PRK09134, short chain dehydrogenase; Provisional

 Score = 38.0 bits (89), Expect = 0.003
 Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 1/87 (1%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTV-ILTARDVERGQRAVESLSEKGLPVNFFQLDVSD 90
            A+VTGA + IG A+   LA  G  V +   R  +  +     +   G      Q D++D
Sbjct: 11  AALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLAD 70

Query: 91  PSSIEAFVSWFKSNFAALDILVNNAGV 117
            + + A V+   +    + +LVNNA +
Sbjct: 71  EAEVRALVARASAALGPITLLVNNASL 97

Length = 258

>gnl|CDD|187539 cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs

 Score = 38.4 bits (90), Expect = 0.003
 Identities = 29/110 (26%), Positives = 43/110 (39%), Gaps = 18/110 (16%)

Query: 33  AIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPS 92
            +VTGA   +G  LV+ L   G  V    R    G  AV      GLPV   + D++D +
Sbjct: 1   ILVTGATGFLGSNLVRALLAQGYRVRALVRS---GSDAVLL---DGLPVEVVEGDLTDAA 54

Query: 93  SIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAK 142
           S+ A            D + + A    +   K      + + RTN  G +
Sbjct: 55  SLAA-------AMKGCDRVFHLAAF-TSLWAK----DRKELYRTNVEGTR 92

This subgroup contains proteins of unknown function related to aldehyde reductase and flavonoid reductase of the extended SDR-type. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 318

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	302
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	100.0
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	100.0
PRK08339	263	short chain dehydrogenase; Provisional	100.0
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
PRK05867	253	short chain dehydrogenase; Provisional	100.0
COG0300	265	DltE Short-chain dehydrogenases of various substra	100.0
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07063	260	short chain dehydrogenase; Provisional	100.0
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	100.0
PRK07478	254	short chain dehydrogenase; Provisional	100.0
PRK08589	272	short chain dehydrogenase; Validated	100.0
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07062	265	short chain dehydrogenase; Provisional	100.0
PRK07791	286	short chain dehydrogenase; Provisional	100.0
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	100.0
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	100.0
PRK06114	254	short chain dehydrogenase; Provisional	100.0
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07985	294	oxidoreductase; Provisional	100.0
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	100.0
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	100.0
PRK08303	305	short chain dehydrogenase; Provisional	100.0
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08085	254	gluconate 5-dehydrogenase; Provisional	100.0
KOG0725	270	consensus Reductases with broad range of substrate	100.0
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	100.0
PRK08277	278	D-mannonate oxidoreductase; Provisional	100.0
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
PRK07035	252	short chain dehydrogenase; Provisional	100.0
PRK06172	253	short chain dehydrogenase; Provisional	100.0
PRK12747	252	short chain dehydrogenase; Provisional	100.0
PRK08265	261	short chain dehydrogenase; Provisional	100.0
PLN02253	280	xanthoxin dehydrogenase	100.0
PRK08643	256	acetoin reductase; Validated	100.0
PRK07523	255	gluconate 5-dehydrogenase; Provisional	100.0
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08340	259	glucose-1-dehydrogenase; Provisional	100.0
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	100.0
PRK08862	227	short chain dehydrogenase; Provisional	100.0
PRK07097	265	gluconate 5-dehydrogenase; Provisional	100.0
PRK06128	300	oxidoreductase; Provisional	100.0
PRK07831	262	short chain dehydrogenase; Provisional	100.0
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	100.0
PRK09242	257	tropinone reductase; Provisional	100.0
PRK06139	330	short chain dehydrogenase; Provisional	100.0
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	100.0
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK06398	258	aldose dehydrogenase; Validated	100.0
PRK06124	256	gluconate 5-dehydrogenase; Provisional	100.0
PRK05876	275	short chain dehydrogenase; Provisional	100.0
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07677	252	short chain dehydrogenase; Provisional	100.0
PRK08936	261	glucose-1-dehydrogenase; Provisional	100.0
PRK12743	256	oxidoreductase; Provisional	100.0
PRK05599	246	hypothetical protein; Provisional	100.0
PRK06125	259	short chain dehydrogenase; Provisional	100.0
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	100.0
PRK05872	296	short chain dehydrogenase; Provisional	100.0
PRK07856	252	short chain dehydrogenase; Provisional	100.0
PRK06523	260	short chain dehydrogenase; Provisional	100.0
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	100.0
PRK06940	275	short chain dehydrogenase; Provisional	100.0
PRK08278	273	short chain dehydrogenase; Provisional	100.0
PRK06484	520	short chain dehydrogenase; Validated	100.0
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07067	257	sorbitol dehydrogenase; Provisional	100.0
PRK08628	258	short chain dehydrogenase; Provisional	100.0
PRK08226	263	short chain dehydrogenase; Provisional	100.0
PRK07814	263	short chain dehydrogenase; Provisional	100.0
TIGR02415	254	23BDH acetoin reductases. One member of this famil	100.0
PRK05854	313	short chain dehydrogenase; Provisional	100.0
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	100.0
PRK06949	258	short chain dehydrogenase; Provisional	100.0
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06841	255	short chain dehydrogenase; Provisional	100.0
PRK12938	246	acetyacetyl-CoA reductase; Provisional	100.0
PRK05717	255	oxidoreductase; Validated	100.0
PRK05866	293	short chain dehydrogenase; Provisional	100.0
PRK12939	250	short chain dehydrogenase; Provisional	100.0
PRK07890	258	short chain dehydrogenase; Provisional	100.0
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	100.0
PRK07825	273	short chain dehydrogenase; Provisional	100.0
PRK08213	259	gluconate 5-dehydrogenase; Provisional	100.0
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PLN00015	308	protochlorophyllide reductase	100.0
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK07109	334	short chain dehydrogenase; Provisional	100.0
KOG1208	314	consensus Dehydrogenases with different specificit	100.0
PRK07576	264	short chain dehydrogenase; Provisional	100.0
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	100.0
PRK06701	290	short chain dehydrogenase; Provisional	100.0
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK06196	315	oxidoreductase; Provisional	100.0
PRK06483	236	dihydromonapterin reductase; Provisional	100.0
PRK09186	256	flagellin modification protein A; Provisional	100.0
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	100.0
PRK06947	248	glucose-1-dehydrogenase; Provisional	100.0
PRK05855	582	short chain dehydrogenase; Validated	100.0
PRK05884	223	short chain dehydrogenase; Provisional	100.0
PRK12744	257	short chain dehydrogenase; Provisional	100.0
PRK12937	245	short chain dehydrogenase; Provisional	100.0
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	100.0
PRK06500	249	short chain dehydrogenase; Provisional	100.0
PLN02780	320	ketoreductase/ oxidoreductase	100.0
PRK06138	252	short chain dehydrogenase; Provisional	100.0
PRK08703	239	short chain dehydrogenase; Provisional	100.0
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	100.0
PRK07774	250	short chain dehydrogenase; Provisional	100.0
PRK06484	520	short chain dehydrogenase; Validated	100.0
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	100.0
PRK06123	248	short chain dehydrogenase; Provisional	100.0
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	100.0
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	100.0
PRK07454	241	short chain dehydrogenase; Provisional	100.0
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	100.0
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	100.0
PRK07024	257	short chain dehydrogenase; Provisional	100.0
PRK12935	247	acetoacetyl-CoA reductase; Provisional	100.0
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	100.0
PRK06198	260	short chain dehydrogenase; Provisional	100.0
PRK06057	255	short chain dehydrogenase; Provisional	100.0
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	100.0
PRK06182	273	short chain dehydrogenase; Validated	100.0
PRK12742	237	oxidoreductase; Provisional	100.0
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK07904	253	short chain dehydrogenase; Provisional	100.0
PRK06194	287	hypothetical protein; Provisional	100.0
PRK06197	306	short chain dehydrogenase; Provisional	100.0
PRK05650	270	short chain dehydrogenase; Provisional	100.0
PRK12824	245	acetoacetyl-CoA reductase; Provisional	100.0
PRK12746	254	short chain dehydrogenase; Provisional	100.0
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	100.0
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	100.0
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	100.0
PRK07832	272	short chain dehydrogenase; Provisional	100.0
PRK05875	276	short chain dehydrogenase; Provisional	100.0
PRK05993	277	short chain dehydrogenase; Provisional	100.0
PRK07453	322	protochlorophyllide oxidoreductase; Validated	100.0
PRK09072	263	short chain dehydrogenase; Provisional	100.0
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.98
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.98
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.98
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	99.98
PRK08263	275	short chain dehydrogenase; Provisional	99.98
PRK12827	249	short chain dehydrogenase; Provisional	99.98
PRK07069	251	short chain dehydrogenase; Validated	99.98
PRK09134	258	short chain dehydrogenase; Provisional	99.98
PRK08251	248	short chain dehydrogenase; Provisional	99.98
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.97
KOG1611	249	consensus Predicted short chain-type dehydrogenase	99.97
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	99.97
PRK07775	274	short chain dehydrogenase; Provisional	99.97
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	99.97
PRK06180	277	short chain dehydrogenase; Provisional	99.97
PRK08267	260	short chain dehydrogenase; Provisional	99.97
PRK07074	257	short chain dehydrogenase; Provisional	99.97
PRK06914	280	short chain dehydrogenase; Provisional	99.97
PRK06179	270	short chain dehydrogenase; Provisional	99.97
PRK10538	248	malonic semialdehyde reductase; Provisional	99.97
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.97
PRK07060	245	short chain dehydrogenase; Provisional	99.97
PRK12828	239	short chain dehydrogenase; Provisional	99.97
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	99.97
PRK07577	234	short chain dehydrogenase; Provisional	99.97
PRK06924	251	short chain dehydrogenase; Provisional	99.97
PRK05693	274	short chain dehydrogenase; Provisional	99.97
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.97
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.97
PRK07102	243	short chain dehydrogenase; Provisional	99.97
PRK09009	235	C factor cell-cell signaling protein; Provisional	99.97
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.97
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.97
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	99.97
PRK08177	225	short chain dehydrogenase; Provisional	99.97
PRK07201	657	short chain dehydrogenase; Provisional	99.97
PRK06181	263	short chain dehydrogenase; Provisional	99.97
PRK07326	237	short chain dehydrogenase; Provisional	99.97
PRK07806	248	short chain dehydrogenase; Provisional	99.97
COG1028	251	FabG Dehydrogenases with different specificities (	99.97
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	99.97
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.97
PRK12829	264	short chain dehydrogenase; Provisional	99.97
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	99.97
PRK06482	276	short chain dehydrogenase; Provisional	99.97
PRK08324	681	short chain dehydrogenase; Validated	99.97
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	99.97
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.97
PRK07578	199	short chain dehydrogenase; Provisional	99.96
PRK06101	240	short chain dehydrogenase; Provisional	99.96
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.96
PRK09135	249	pteridine reductase; Provisional	99.96
PRK07041	230	short chain dehydrogenase; Provisional	99.96
PRK06953	222	short chain dehydrogenase; Provisional	99.96
PRK09291	257	short chain dehydrogenase; Provisional	99.96
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.96
PRK07023	243	short chain dehydrogenase; Provisional	99.96
PRK08264	238	short chain dehydrogenase; Validated	99.96
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	99.95
PRK08017	256	oxidoreductase; Provisional	99.95
PRK12367	245	short chain dehydrogenase; Provisional	99.95
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	99.94
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.94
PRK08219	227	short chain dehydrogenase; Provisional	99.93
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	99.93
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	99.92
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.9
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.89
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	99.88
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.87
PLN03209	576	translocon at the inner envelope of chloroplast su	99.85
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	99.85
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.85
PLN02583	297	cinnamoyl-CoA reductase	99.85
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.84
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.83
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	99.82
PRK06720	169	hypothetical protein; Provisional	99.8
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.8
PLN02650	351	dihydroflavonol-4-reductase	99.8
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.8
PLN02653	340	GDP-mannose 4,6-dehydratase	99.8
PLN02214	342	cinnamoyl-CoA reductase	99.79
PLN02572	442	UDP-sulfoquinovose synthase	99.78
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.77
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	99.76
PLN00198	338	anthocyanidin reductase; Provisional	99.75
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	99.75
PLN02240	352	UDP-glucose 4-epimerase	99.74
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.73
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.73
PLN02686	367	cinnamoyl-CoA reductase	99.73
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.71
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	99.7
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.69
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.69
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.68
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.67
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.67
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.65
PLN02427	386	UDP-apiose/xylose synthase	99.65
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.64
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.63
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	99.62
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	99.62
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	99.61
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	99.59
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.58
PLN02695	370	GDP-D-mannose-3',5'-epimerase	99.57
PLN02260	668	probable rhamnose biosynthetic enzyme	99.55
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	99.55
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	99.54
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	99.53
PLN02206	442	UDP-glucuronate decarboxylase	99.51
CHL00194	317	ycf39 Ycf39; Provisional	99.51
PLN02166	436	dTDP-glucose 4,6-dehydratase	99.51
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	99.5
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	99.48
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	99.47
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	99.44
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.41
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.41
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	99.41
PRK07201	657	short chain dehydrogenase; Provisional	99.39
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	99.38
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	99.36
PF08643	299	DUF1776: Fungal family of unknown function (DUF177	99.32
PLN02996	491	fatty acyl-CoA reductase	99.32
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	99.31
PLN02503	605	fatty acyl-CoA reductase 2	99.31
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	99.28
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.27
PLN02778	298	3,5-epimerase/4-reductase	99.27
PRK05865	854	hypothetical protein; Provisional	99.26
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	99.2
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	99.18
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.17
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.14
PLN02260	668	probable rhamnose biosynthetic enzyme	99.09
PRK08309	177	short chain dehydrogenase; Provisional	99.08
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	99.01
PLN00016	378	RNA-binding protein; Provisional	98.96
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	98.9
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.88
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	98.77
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	98.74
PRK12320	699	hypothetical protein; Provisional	98.69
PRK12548	289	shikimate 5-dehydrogenase; Provisional	98.68
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	98.58
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.55
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	98.52
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	98.49
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	98.39
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	98.37
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	98.35
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	98.3
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	98.3
COG4982	866	3-oxoacyl-[acyl-carrier protein]	98.28
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.27
COG2910	211	Putative NADH-flavin reductase [General function p	98.23
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.1
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	98.09
PRK09620	229	hypothetical protein; Provisional	97.98
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	97.96
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.95
KOG2733	423	consensus Uncharacterized membrane protein [Functi	97.95
PTZ00325	321	malate dehydrogenase; Provisional	97.92
PLN00106	323	malate dehydrogenase	97.87
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	97.84
PRK14982	340	acyl-ACP reductase; Provisional	97.84
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	97.7
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.63
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	97.61
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	97.51
KOG2774	366	consensus NAD dependent epimerase [General functio	97.5
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	97.47
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	97.42
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.39
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	97.38
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	97.35
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	97.33
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	97.33
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	97.28
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	97.26
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	97.25
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	97.23
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	97.16
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	97.12
PRK06849	389	hypothetical protein; Provisional	97.11
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	97.06
COG3268	382	Uncharacterized conserved protein [Function unknow	97.05
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	97.05
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	97.04
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	96.99
PRK15116	268	sulfur acceptor protein CsdL; Provisional	96.97
PRK05086	312	malate dehydrogenase; Provisional	96.95
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	96.94
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	96.93
PRK13940	414	glutamyl-tRNA reductase; Provisional	96.89
PRK14968	188	putative methyltransferase; Provisional	96.89
COG0569	225	TrkA K+ transport systems, NAD-binding component [	96.88
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	96.86
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	96.84
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	96.83
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	96.82
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	96.78
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	96.78
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	96.74
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	96.71
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	96.67
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	96.67
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	96.66
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	96.66
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	96.63
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	96.63
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	96.61
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	96.61
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	96.6
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	96.58
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	96.54
PTZ00117	319	malate dehydrogenase; Provisional	96.53
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	96.53
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	96.53
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	96.51
PLN00203	519	glutamyl-tRNA reductase	96.46
COG2130	340	Putative NADP-dependent oxidoreductases [General f	96.45
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	96.44
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	96.41
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	96.4
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	96.38
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	96.36
PLN00112	444	malate dehydrogenase (NADP); Provisional	96.36
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	96.34
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	96.3
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	96.28
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	96.26
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	96.24
PLN02602	350	lactate dehydrogenase	96.24
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	96.21
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	96.19
PRK09496	453	trkA potassium transporter peripheral membrane com	96.18
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	96.17
PRK08306	296	dipicolinate synthase subunit A; Reviewed	96.14
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	96.13
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	96.12
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	96.11
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	96.1
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	96.07
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	96.06
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.05
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	96.02
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	96.02
PRK08223	287	hypothetical protein; Validated	96.0
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	95.97
PRK08328	231	hypothetical protein; Provisional	95.92
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	95.91
cd00300	300	LDH_like L-lactate dehydrogenase-like enzymes. Mem	95.91
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	95.9
PRK04308	445	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.9
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	95.84
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	95.83
cd05290	307	LDH_3 A subgroup of L-lactate dehydrogenases. L-la	95.83
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.83
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	95.82
PF12242	78	Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2	95.82
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	95.75
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	95.74
PTZ00082	321	L-lactate dehydrogenase; Provisional	95.74
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	95.71
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	95.7
PRK09496	453	trkA potassium transporter peripheral membrane com	95.67
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	95.63
PRK04148	134	hypothetical protein; Provisional	95.59
PRK05442	326	malate dehydrogenase; Provisional	95.56
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	95.54
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	95.45
KOG1197	336	consensus Predicted quinone oxidoreductase [Energy	95.37
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	95.36
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	95.35
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	95.34
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	95.33
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	95.32
TIGR01757	387	Malate-DH_plant malate dehydrogenase, NADP-depende	95.3
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	95.29
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	95.27
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	95.2
PLN02494	477	adenosylhomocysteinase	95.18
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	95.15
PRK07411	390	hypothetical protein; Validated	95.15
PRK06223	307	malate dehydrogenase; Reviewed	95.12
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	95.07
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	95.04
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	95.03
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	94.97
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	94.96
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.91
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	94.89
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	94.87
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	94.87
PLN02928	347	oxidoreductase family protein	94.86
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	94.86
PRK08655	437	prephenate dehydrogenase; Provisional	94.86
PTZ00075	476	Adenosylhomocysteinase; Provisional	94.82
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	94.82
PRK02006	498	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	94.82
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	94.8
PRK14967	223	putative methyltransferase; Provisional	94.79
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	94.79
TIGR03840	213	TMPT_Se_Te thiopurine S-methyltransferase, Se/Te d	94.78
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	94.77
PF12076	164	Wax2_C: WAX2 C-terminal domain; InterPro: IPR02194	94.74
KOG0025	354	consensus Zn2+-binding dehydrogenase (nuclear rece	94.73
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	94.72
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	94.67
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	94.66
KOG1196	343	consensus Predicted NAD-dependent oxidoreductase [	94.66
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.63
PLN02740	381	Alcohol dehydrogenase-like	94.62
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	94.61
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	94.55
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	94.54
cd01489	312	Uba2_SUMO Ubiquitin activating enzyme (E1) subunit	94.48
cd01339	300	LDH-like_MDH L-lactate dehydrogenase-like malate d	94.48
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	94.47
PTZ00354	334	alcohol dehydrogenase; Provisional	94.45
cd05191	86	NAD_bind_amino_acid_DH NAD(P) binding domain of am	94.4
PRK12480	330	D-lactate dehydrogenase; Provisional	94.39
TIGR01771	299	L-LDH-NAD L-lactate dehydrogenase. This model repr	94.34
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	94.34
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	94.33
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	94.33
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	94.32
cd01484	234	E1-2_like Ubiquitin activating enzyme (E1), repeat	94.29
COG1052	324	LdhA Lactate dehydrogenase and related dehydrogena	94.27
PRK10669	558	putative cation:proton antiport protein; Provision	94.27
PLN02586	360	probable cinnamyl alcohol dehydrogenase	94.25
PRK14851	679	hypothetical protein; Provisional	94.25
PLN02178	375	cinnamyl-alcohol dehydrogenase	94.23
PRK06719	157	precorrin-2 dehydrogenase; Validated	94.23
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	94.23
TIGR00446	264	nop2p NOL1/NOP2/sun family putative RNA methylase.	94.21
PRK07574	385	formate dehydrogenase; Provisional	94.19
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	94.19
PRK09288	395	purT phosphoribosylglycinamide formyltransferase 2	94.14
TIGR00537	179	hemK_rel_arch HemK-related putative methylase. The	94.13
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	94.12
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.03
COG2227	243	UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-	94.01
PRK02842	427	light-independent protochlorophyllide reductase su	94.0
cd08299	373	alcohol_DH_class_I_II_IV class I, II, IV alcohol d	93.92
COG1179	263	Dinucleotide-utilizing enzymes involved in molybdo	93.91
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	93.89
cd05295	452	MDH_like Malate dehydrogenase-like. These MDH-like	93.85
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	93.83

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=100.00  E-value=2.3e-39  Score=282.83  Aligned_cols=212  Identities=28%  Similarity=0.379  Sum_probs=192.5

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      .+++|+++||||++|||.++|++|++.|++|++++|+.+++++.++++.+  ..+.++..|++|.+++..+++.+.++|+
T Consensus         3 ~~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~--~~~~~~~~DVtD~~~~~~~i~~~~~~~g   80 (246)
T COG4221           3 TLKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGA--GAALALALDVTDRAAVEAAIEALPEEFG   80 (246)
T ss_pred             CCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhcc--CceEEEeeccCCHHHHHHHHHHHHHhhC
Confidence            45679999999999999999999999999999999999999999999976  5789999999999999999999999999


Q ss_pred             CccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccch
Q 022103          107 ALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILED  185 (302)
Q Consensus       107 ~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~  185 (302)
                      ++|+||||||.+.. ++.+.+.++|++++++|+.|.++.+++++|.|.++ ..|+||++||++|..+.+.          
T Consensus        81 ~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r-~~G~IiN~~SiAG~~~y~~----------  149 (246)
T COG4221          81 RIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVER-KSGHIINLGSIAGRYPYPG----------  149 (246)
T ss_pred             cccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhc-CCceEEEeccccccccCCC----------
Confidence            99999999998754 78999999999999999999999999999999998 6789999999999877543          


Q ss_pred             hhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC---
Q 022103          186 EELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ---  262 (302)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~---  262 (302)
                                                      ...|+++|+++..|+..|+.|+..++|||..|+||.+.|..+...   
T Consensus       150 --------------------------------~~vY~ATK~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~~  197 (246)
T COG4221         150 --------------------------------GAVYGATKAAVRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTVRFE  197 (246)
T ss_pred             --------------------------------CccchhhHHHHHHHHHHHHHHhcCCCeeEEEecCceecceecccccCC
Confidence                                            478999999999999999999999999999999999966543332   


Q ss_pred             -------------CCCCHHHHHHHHHHHhhcCCC
Q 022103          263 -------------GSHTADEAADVGARLLLLHPQ  283 (302)
Q Consensus       263 -------------~~~~~~~~a~~~~~l~~~~~~  283 (302)
                                   ....|+++|..+.+.+..|..
T Consensus       198 g~~~~~~~~y~~~~~l~p~dIA~~V~~~~~~P~~  231 (246)
T COG4221         198 GDDERADKVYKGGTALTPEDIAEAVLFAATQPQH  231 (246)
T ss_pred             chhhhHHHHhccCCCCCHHHHHHHHHHHHhCCCc
Confidence                         137899999999999985443

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=100.00  E-value=2.2e-40  Score=277.89  Aligned_cols=228  Identities=25%  Similarity=0.314  Sum_probs=207.8

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      -.+..|.++||||++|||+++++.|+++|++|++.+++....+.+++.|..++ +...|.||+++.++++..+++..+.+
T Consensus        10 ~r~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~-~h~aF~~DVS~a~~v~~~l~e~~k~~   88 (256)
T KOG1200|consen   10 QRLMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYG-DHSAFSCDVSKAHDVQNTLEEMEKSL   88 (256)
T ss_pred             HHHhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCC-ccceeeeccCcHHHHHHHHHHHHHhc
Confidence            34667999999999999999999999999999999999999999999998765 56789999999999999999999999


Q ss_pred             CCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCC-CCCcEEEecCCCcccccccCccccccc
Q 022103          106 AALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSP-SKSRILNISSRLGTLSKVRNPNIKSIL  183 (302)
Q Consensus       106 g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~-~~~~iv~vsS~~~~~~~~~~~~~~~~~  183 (302)
                      |++++||+|||+..+ -+..+..++|+.++.+|+.|.|+++|++...|..+. ++.+||+|||+-|..++..+       
T Consensus        89 g~psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN~GQ-------  161 (256)
T KOG1200|consen   89 GTPSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGNFGQ-------  161 (256)
T ss_pred             CCCcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhcccccccc-------
Confidence            999999999999876 468899999999999999999999999999855543 45599999999999888765       


Q ss_pred             chhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCCC
Q 022103          184 EDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQG  263 (302)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~~  263 (302)
                                                         .-|+++|.++.+|+++.|+|+++++||||+|.||+|.|||+..++
T Consensus       162 -----------------------------------tnYAAsK~GvIgftktaArEla~knIrvN~VlPGFI~tpMT~~mp  206 (256)
T KOG1200|consen  162 -----------------------------------TNYAASKGGVIGFTKTAARELARKNIRVNVVLPGFIATPMTEAMP  206 (256)
T ss_pred             -----------------------------------hhhhhhcCceeeeeHHHHHHHhhcCceEeEeccccccChhhhhcC
Confidence                                               449999999999999999999999999999999999999988764


Q ss_pred             C---------------CCHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          264 S---------------HTADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       264 ~---------------~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                      +               ..+||+|+.+++|++ +...|++|..+..+|..
T Consensus       207 ~~v~~ki~~~iPmgr~G~~EevA~~V~fLAS-~~ssYiTG~t~evtGGl  254 (256)
T KOG1200|consen  207 PKVLDKILGMIPMGRLGEAEEVANLVLFLAS-DASSYITGTTLEVTGGL  254 (256)
T ss_pred             HHHHHHHHccCCccccCCHHHHHHHHHHHhc-cccccccceeEEEeccc
Confidence            3               679999999999996 89999999999988874

>PRK08339 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.4e-39  Score=291.72  Aligned_cols=233  Identities=23%  Similarity=0.242  Sum_probs=204.1

Q ss_pred             ccccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhC-CCceeEEEeeCCCHHHHHHHHHHHH
Q 022103           24 TKWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEK-GLPVNFFQLDVSDPSSIEAFVSWFK  102 (302)
Q Consensus        24 ~~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dlt~~~~~~~~~~~~~  102 (302)
                      .++++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+. +.++.++.+|++|+++++++++++.
T Consensus         2 ~~~~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~   81 (263)
T PRK08339          2 LKIDLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELK   81 (263)
T ss_pred             CccCCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHH
Confidence            456789999999999999999999999999999999999999888888877653 4578899999999999999999986


Q ss_pred             hhCCCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCccccc
Q 022103          103 SNFAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKS  181 (302)
Q Consensus       103 ~~~g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~  181 (302)
                       ++|++|++|||||.... ++.+.+.++|++++++|+.++++++++++|.|.++ +.|+||++||..+..+.+       
T Consensus        82 -~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~-~~g~Ii~isS~~~~~~~~-------  152 (263)
T PRK08339         82 -NIGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERK-GFGRIIYSTSVAIKEPIP-------  152 (263)
T ss_pred             -hhCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCCEEEEEcCccccCCCC-------
Confidence             58999999999997643 57789999999999999999999999999999876 569999999988764422       


Q ss_pred             ccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCC
Q 022103          182 ILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG  261 (302)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~  261 (302)
                                                         .+..|+++|+|+++|+++++.|++++|||||+|+||+|+|+|...
T Consensus       153 -----------------------------------~~~~y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~  197 (263)
T PRK08339        153 -----------------------------------NIALSNVVRISMAGLVRTLAKELGPKGITVNGIMPGIIRTDRVIQ  197 (263)
T ss_pred             -----------------------------------cchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccHHHHH
Confidence                                               246799999999999999999999999999999999999997421


Q ss_pred             C--------------------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcccCCC
Q 022103          262 Q--------------------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVKSN  301 (302)
Q Consensus       262 ~--------------------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~~  301 (302)
                      .                          +...|+++|..+.+|+. +...+++|+++..++...++-
T Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~fL~s-~~~~~itG~~~~vdgG~~~~~  262 (263)
T PRK08339        198 LAQDRAKREGKSVEEALQEYAKPIPLGRLGEPEEIGYLVAFLAS-DLGSYINGAMIPVDGGRLNSV  262 (263)
T ss_pred             HHHhhhhccCCCHHHHHHHHhccCCcccCcCHHHHHHHHHHHhc-chhcCccCceEEECCCccccC
Confidence            0                          12569999999999987 677889999999999887764

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=5.2e-38  Score=281.87  Aligned_cols=228  Identities=24%  Similarity=0.287  Sum_probs=197.8

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      +.+++|+++||||++|||+++|++|+++|++|++++|+..  +...+++.+.+.++.++.+|++++++++++++++.+.+
T Consensus         4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   81 (251)
T PRK12481          4 FDLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEA--PETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVM   81 (251)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchH--HHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHc
Confidence            4578999999999999999999999999999999988643  34445555556678899999999999999999999999


Q ss_pred             CCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccc
Q 022103          106 AALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILE  184 (302)
Q Consensus       106 g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~  184 (302)
                      +++|++|||||.... ++.+.+.++|+.++++|+.+++++++++++.|.+++..++||++||..+..+.+.         
T Consensus        82 g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~---------  152 (251)
T PRK12481         82 GHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIR---------  152 (251)
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCCCC---------
Confidence            999999999998654 5678899999999999999999999999999987644689999999888654322         


Q ss_pred             hhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC--
Q 022103          185 DEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ--  262 (302)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~--  262 (302)
                                                       ..+|++||+|+++|+++++.|++++||+||+|+||+++|+|....  
T Consensus       153 ---------------------------------~~~Y~asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~~~  199 (251)
T PRK12481        153 ---------------------------------VPSYTASKSAVMGLTRALATELSQYNINVNAIAPGYMATDNTAALRA  199 (251)
T ss_pred             ---------------------------------CcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhccc
Confidence                                             367999999999999999999999999999999999999986532  


Q ss_pred             ---------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          263 ---------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       263 ---------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                                     ...+|+++|..+.+|++ +...+++|+.+..++...
T Consensus       200 ~~~~~~~~~~~~p~~~~~~peeva~~~~~L~s-~~~~~~~G~~i~vdgg~~  249 (251)
T PRK12481        200 DTARNEAILERIPASRWGTPDDLAGPAIFLSS-SASDYVTGYTLAVDGGWL  249 (251)
T ss_pred             ChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC-ccccCcCCceEEECCCEe
Confidence                           12579999999999997 677889999999988753

>PRK05867 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.1e-38  Score=281.08  Aligned_cols=230  Identities=22%  Similarity=0.256  Sum_probs=203.5

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      .+++|+++||||++|||++++++|+++|++|++++|+.+++++..+++...+.++.++.+|++++++++++++++.+.++
T Consensus         6 ~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   85 (253)
T PRK05867          6 DLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELG   85 (253)
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            47899999999999999999999999999999999999999998888887777888999999999999999999999999


Q ss_pred             CccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccch
Q 022103          107 ALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILED  185 (302)
Q Consensus       107 ~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~  185 (302)
                      ++|+||||||.... ++.+.+.++|++++++|+.+++++++++++.|.+++..++||++||..+.....           
T Consensus        86 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~-----------  154 (253)
T PRK05867         86 GIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINV-----------  154 (253)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCCC-----------
Confidence            99999999997643 567789999999999999999999999999998764457899999987653211           


Q ss_pred             hhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC---
Q 022103          186 EELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ---  262 (302)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~---  262 (302)
                                                   |..+.+|+++|+|+++++++++.|++++||+||+|+||+|+|++....   
T Consensus       155 -----------------------------~~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~~~~~  205 (253)
T PRK05867        155 -----------------------------PQQVSHYCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEPYTEY  205 (253)
T ss_pred             -----------------------------CCCccchHHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcccccchHH
Confidence                                         122467999999999999999999999999999999999999986532   


Q ss_pred             -----------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          263 -----------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       263 -----------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                                 +..+|+++|..+++|+. +...+++|+.+..++.+
T Consensus       206 ~~~~~~~~~~~r~~~p~~va~~~~~L~s-~~~~~~tG~~i~vdgG~  250 (253)
T PRK05867        206 QPLWEPKIPLGRLGRPEELAGLYLYLAS-EASSYMTGSDIVIDGGY  250 (253)
T ss_pred             HHHHHhcCCCCCCcCHHHHHHHHHHHcC-cccCCcCCCeEEECCCc
Confidence                       23689999999999997 67788999999999875

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=100.00  E-value=5.6e-38  Score=280.70  Aligned_cols=219  Identities=27%  Similarity=0.423  Sum_probs=198.0

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhC-CCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEK-GLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      .+++++++|||||+|||+++|+.|+++|++|++++|+.+++++.++++... +..+.++++|+++.+++..+.+++.+.+
T Consensus         3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~   82 (265)
T COG0300           3 PMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERG   82 (265)
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcC
Confidence            367899999999999999999999999999999999999999999999865 4678999999999999999999999999


Q ss_pred             CCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccc
Q 022103          106 AALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILE  184 (302)
Q Consensus       106 g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~  184 (302)
                      +.||+||||||.... ++.+.++++.++++++|+.+...|+++++|.|.++ +.|+||+|+|.++..+.+.         
T Consensus        83 ~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~-~~G~IiNI~S~ag~~p~p~---------  152 (265)
T COG0300          83 GPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVER-GAGHIINIGSAAGLIPTPY---------  152 (265)
T ss_pred             CcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCceEEEEechhhcCCCcc---------
Confidence            999999999998755 68999999999999999999999999999999998 7899999999999877533         


Q ss_pred             hhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC--
Q 022103          185 DEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ--  262 (302)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~--  262 (302)
                                                       .+.|++||+++.+|+.+|+.|+.++||+|.+|+||+|.|+++..-  
T Consensus       153 ---------------------------------~avY~ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~~~~~  199 (265)
T COG0300         153 ---------------------------------MAVYSATKAFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFDAKGS  199 (265)
T ss_pred             ---------------------------------hHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEecCcccccccccccc
Confidence                                             478999999999999999999999999999999999999999511  


Q ss_pred             ---------CCCCHHHHHHHHHHHhhcCCCCCCCc
Q 022103          263 ---------GSHTADEAADVGARLLLLHPQQLPTA  288 (302)
Q Consensus       263 ---------~~~~~~~~a~~~~~l~~~~~~~~~~G  288 (302)
                               ...+|+++|..+++.+.......+-|
T Consensus       200 ~~~~~~~~~~~~~~~~va~~~~~~l~~~k~~ii~~  234 (265)
T COG0300         200 DVYLLSPGELVLSPEDVAEAALKALEKGKREIIPG  234 (265)
T ss_pred             ccccccchhhccCHHHHHHHHHHHHhcCCceEecC
Confidence                     13789999999999987545444444

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.4e-37  Score=279.37  Aligned_cols=223  Identities=18%  Similarity=0.194  Sum_probs=192.6

Q ss_pred             cccCcEEEEeCCC--chHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhh
Q 022103           27 WSKETIAIVTGAN--KGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSN  104 (302)
Q Consensus        27 ~~~~k~vlItGas--~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~  104 (302)
                      .+++|+++||||+  +|||+++|++|+++|++|++++|+ ++.++..+++..  ..+.++++|++|+++++++++++.++
T Consensus         4 ~l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~-~~~~~~~~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~~   80 (252)
T PRK06079          4 ILSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQN-DRMKKSLQKLVD--EEDLLVECDVASDESIERAFATIKER   80 (252)
T ss_pred             ccCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCc-hHHHHHHHhhcc--CceeEEeCCCCCHHHHHHHHHHHHHH
Confidence            3789999999999  799999999999999999999998 344555555532  35788999999999999999999999


Q ss_pred             CCCccEEEEcCCCCC-----CCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCccc
Q 022103          105 FAALDILVNNAGVSF-----NDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNI  179 (302)
Q Consensus       105 ~g~id~lv~~aG~~~-----~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~  179 (302)
                      ++++|+||||||...     .++.+.+.++|+..+++|+.++++++++++|.|.+   .++||+++|..+..+.      
T Consensus        81 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~---~g~Iv~iss~~~~~~~------  151 (252)
T PRK06079         81 VGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNP---GASIVTLTYFGSERAI------  151 (252)
T ss_pred             hCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhccc---CceEEEEeccCccccC------
Confidence            999999999999753     35678899999999999999999999999999964   4899999998775432      


Q ss_pred             ccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCC
Q 022103          180 KSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMT  259 (302)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~  259 (302)
                                                          +.+.+|++||+|+++|+++|+.|++++||+||+|+||+|+|+|.
T Consensus       152 ------------------------------------~~~~~Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~  195 (252)
T PRK06079        152 ------------------------------------PNYNVMGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAV  195 (252)
T ss_pred             ------------------------------------CcchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCccccccc
Confidence                                                23478999999999999999999999999999999999999985


Q ss_pred             CCC-----------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          260 QGQ-----------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       260 ~~~-----------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                      ...                 +..+|+++|..+.+|+. +...+++|+++..++...
T Consensus       196 ~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~~l~s-~~~~~itG~~i~vdgg~~  250 (252)
T PRK06079        196 TGIKGHKDLLKESDSRTVDGVGVTIEEVGNTAAFLLS-DLSTGVTGDIIYVDKGVH  250 (252)
T ss_pred             ccCCChHHHHHHHHhcCcccCCCCHHHHHHHHHHHhC-cccccccccEEEeCCcee
Confidence            321                 23679999999999997 677889999999998754

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.8e-37  Score=281.92  Aligned_cols=224  Identities=21%  Similarity=0.234  Sum_probs=189.6

Q ss_pred             ccCcEEEEeCCCc--hHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           28 SKETIAIVTGANK--GIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        28 ~~~k~vlItGas~--gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      +++|++|||||++  |||+++|++|+++|++|++++|+.+..+. .+++.+..+....+.+|++|.++++++++++.+++
T Consensus         5 l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~-~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~   83 (271)
T PRK06505          5 MQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKR-VKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKW   83 (271)
T ss_pred             cCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHH-HHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHh
Confidence            6899999999996  99999999999999999999998643333 33332221223578999999999999999999999


Q ss_pred             CCccEEEEcCCCCC-----CCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccc
Q 022103          106 AALDILVNNAGVSF-----NDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIK  180 (302)
Q Consensus       106 g~id~lv~~aG~~~-----~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~  180 (302)
                      |++|+||||||...     .++.+.+.++|++++++|++++++++++++|+|.+   .|+||++||..+..+.       
T Consensus        84 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~---~G~Iv~isS~~~~~~~-------  153 (271)
T PRK06505         84 GKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPD---GGSMLTLTYGGSTRVM-------  153 (271)
T ss_pred             CCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhcc---CceEEEEcCCCccccC-------
Confidence            99999999999753     24678899999999999999999999999999973   3899999998775432       


Q ss_pred             cccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCC
Q 022103          181 SILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ  260 (302)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~  260 (302)
                                                         +.+.+|++||+|+++|+++|+.|++++|||||+|+||+|+|+|..
T Consensus       154 -----------------------------------~~~~~Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~  198 (271)
T PRK06505        154 -----------------------------------PNYNVMGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGA  198 (271)
T ss_pred             -----------------------------------CccchhhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccccc
Confidence                                               234789999999999999999999999999999999999999853


Q ss_pred             CC-----------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          261 GQ-----------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       261 ~~-----------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                      ..                 +..+|+++|..+++|++ +...+++|+.+..++...
T Consensus       199 ~~~~~~~~~~~~~~~~p~~r~~~peeva~~~~fL~s-~~~~~itG~~i~vdgG~~  252 (271)
T PRK06505        199 GIGDARAIFSYQQRNSPLRRTVTIDEVGGSALYLLS-DLSSGVTGEIHFVDSGYN  252 (271)
T ss_pred             cCcchHHHHHHHhhcCCccccCCHHHHHHHHHHHhC-ccccccCceEEeecCCcc
Confidence            21                 12579999999999987 677889999999998753

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2e-37  Score=282.18  Aligned_cols=224  Identities=22%  Similarity=0.290  Sum_probs=189.1

Q ss_pred             cccCcEEEEeCCC--chHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHh-hCCCceeEEEeeCCCHHHHHHHHHHHHh
Q 022103           27 WSKETIAIVTGAN--KGIGFALVKRLAELGLTVILTARDVERGQRAVESLS-EKGLPVNFFQLDVSDPSSIEAFVSWFKS  103 (302)
Q Consensus        27 ~~~~k~vlItGas--~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~-~~~~~~~~~~~Dlt~~~~~~~~~~~~~~  103 (302)
                      .+++|+++||||+  +|||+++|++|+++|++|++++|+.+ .++..+++. +.+.. .++.+|++|.++++++++++.+
T Consensus         2 ~l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~-~~~~~~~~~~~~~~~-~~~~~Dv~d~~~v~~~~~~i~~   79 (274)
T PRK08415          2 IMKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEA-LKKRVEPIAQELGSD-YVYELDVSKPEHFKSLAESLKK   79 (274)
T ss_pred             ccCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHH-HHHHHHHHHHhcCCc-eEEEecCCCHHHHHHHHHHHHH
Confidence            4678999999997  89999999999999999999999853 223333332 22334 6789999999999999999999


Q ss_pred             hCCCccEEEEcCCCCC-----CCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcc
Q 022103          104 NFAALDILVNNAGVSF-----NDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPN  178 (302)
Q Consensus       104 ~~g~id~lv~~aG~~~-----~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~  178 (302)
                      ++|++|+||||||...     .++.+.+.++|+.++++|+.+++++++.++|.|.+   .++||++||..+..+.     
T Consensus        80 ~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~---~g~Iv~isS~~~~~~~-----  151 (274)
T PRK08415         80 DLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLND---GASVLTLSYLGGVKYV-----  151 (274)
T ss_pred             HcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhcc---CCcEEEEecCCCccCC-----
Confidence            9999999999999753     34678899999999999999999999999999965   3899999998775432     


Q ss_pred             cccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCC
Q 022103          179 IKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSM  258 (302)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~  258 (302)
                                                           +.+..|++||+|+++|+++|+.|++++||+||+|+||+|+|+|
T Consensus       152 -------------------------------------~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~  194 (274)
T PRK08415        152 -------------------------------------PHYNVMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLA  194 (274)
T ss_pred             -------------------------------------CcchhhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHH
Confidence                                                 2246799999999999999999999999999999999999987


Q ss_pred             CCCC-----------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          259 TQGQ-----------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       259 ~~~~-----------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                      ....                 +...|+++|..+++|+. +...+++|+.+..+|...
T Consensus       195 ~~~~~~~~~~~~~~~~~~pl~r~~~pedva~~v~fL~s-~~~~~itG~~i~vdGG~~  250 (274)
T PRK08415        195 ASGIGDFRMILKWNEINAPLKKNVSIEEVGNSGMYLLS-DLSSGVTGEIHYVDAGYN  250 (274)
T ss_pred             HhccchhhHHhhhhhhhCchhccCCHHHHHHHHHHHhh-hhhhcccccEEEEcCccc
Confidence            4311                 12578999999999997 667889999999998754

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=4.4e-37  Score=277.47  Aligned_cols=225  Identities=17%  Similarity=0.179  Sum_probs=190.6

Q ss_pred             cccCcEEEEeCCCc--hHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhh
Q 022103           27 WSKETIAIVTGANK--GIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSN  104 (302)
Q Consensus        27 ~~~~k~vlItGas~--gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~  104 (302)
                      .+++|+++||||++  |||+++|++|+++|++|++.+|+. +.++..+++.+..+...++.+|++|+++++++++++.++
T Consensus         5 ~~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~-~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (260)
T PRK06603          5 LLQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSE-VLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEK   83 (260)
T ss_pred             ccCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCch-HHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHH
Confidence            46789999999997  999999999999999999999874 444455555443222356789999999999999999999


Q ss_pred             CCCccEEEEcCCCCC-----CCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCccc
Q 022103          105 FAALDILVNNAGVSF-----NDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNI  179 (302)
Q Consensus       105 ~g~id~lv~~aG~~~-----~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~  179 (302)
                      +|++|+||||||...     .++.+.+.++|++++++|+.+++.+++++.|.|.+   .|+||++||..+..+.      
T Consensus        84 ~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~---~G~Iv~isS~~~~~~~------  154 (260)
T PRK06603         84 WGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHD---GGSIVTLTYYGAEKVI------  154 (260)
T ss_pred             cCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhcc---CceEEEEecCccccCC------
Confidence            999999999999753     24678899999999999999999999999999953   4899999998775332      


Q ss_pred             ccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCC
Q 022103          180 KSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMT  259 (302)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~  259 (302)
                                                          +.+.+|++||+|+++|+++|+.|++++||+||+|+||+++|+|.
T Consensus       155 ------------------------------------~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~  198 (260)
T PRK06603        155 ------------------------------------PNYNVMGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTLAS  198 (260)
T ss_pred             ------------------------------------CcccchhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhh
Confidence                                                22478999999999999999999999999999999999999974


Q ss_pred             CC----------------C-CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          260 QG----------------Q-GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       260 ~~----------------~-~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                      ..                . +...|+++|+.+++|++ +...+++|+.+..++.+.
T Consensus       199 ~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~~L~s-~~~~~itG~~i~vdgG~~  253 (260)
T PRK06603        199 SAIGDFSTMLKSHAATAPLKRNTTQEDVGGAAVYLFS-ELSKGVTGEIHYVDCGYN  253 (260)
T ss_pred             hcCCCcHHHHHHHHhcCCcCCCCCHHHHHHHHHHHhC-cccccCcceEEEeCCccc
Confidence            31                1 12579999999999997 677889999999998854

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=5.7e-37  Score=276.35  Aligned_cols=227  Identities=19%  Similarity=0.189  Sum_probs=190.3

Q ss_pred             ccccccCcEEEEeCCC--chHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHH
Q 022103           24 TKWWSKETIAIVTGAN--KGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWF  101 (302)
Q Consensus        24 ~~~~~~~k~vlItGas--~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~  101 (302)
                      +..++++|+++||||+  +|||+++|++|+++|++|++++|+.+..+ ..+++.+......++.+|++|.++++++++++
T Consensus         4 ~~~~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   82 (258)
T PRK07533          4 PLLPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARP-YVEPLAEELDAPIFLPLDVREPGQLEAVFARI   82 (258)
T ss_pred             cccccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHH-HHHHHHHhhccceEEecCcCCHHHHHHHHHHH
Confidence            4556889999999998  49999999999999999999999864322 22333222224567899999999999999999


Q ss_pred             HhhCCCccEEEEcCCCCC-----CCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccC
Q 022103          102 KSNFAALDILVNNAGVSF-----NDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRN  176 (302)
Q Consensus       102 ~~~~g~id~lv~~aG~~~-----~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~  176 (302)
                      .+++|++|++|||||...     .++.+.+.++|++++++|+.+++++++.++|.|.+   .++||++||..+..+.   
T Consensus        83 ~~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~---~g~Ii~iss~~~~~~~---  156 (258)
T PRK07533         83 AEEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTN---GGSLLTMSYYGAEKVV---  156 (258)
T ss_pred             HHHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhcc---CCEEEEEeccccccCC---
Confidence            999999999999999753     24677899999999999999999999999999953   4899999998765332   


Q ss_pred             cccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccC
Q 022103          177 PNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQT  256 (302)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T  256 (302)
                                                             +.+..|++||+|+++|+++|+.|++++||+||+|+||+++|
T Consensus       157 ---------------------------------------~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T  197 (258)
T PRK07533        157 ---------------------------------------ENYNLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKT  197 (258)
T ss_pred             ---------------------------------------ccchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCC
Confidence                                                   22467999999999999999999999999999999999999


Q ss_pred             CCCCCC-----------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          257 SMTQGQ-----------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       257 ~~~~~~-----------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                      +|....                 +...|+++|..+++|+. +...+++|+.+..++..
T Consensus       198 ~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~~L~s-~~~~~itG~~i~vdgg~  254 (258)
T PRK07533        198 RAASGIDDFDALLEDAAERAPLRRLVDIDDVGAVAAFLAS-DAARRLTGNTLYIDGGY  254 (258)
T ss_pred             hhhhccCCcHHHHHHHHhcCCcCCCCCHHHHHHHHHHHhC-hhhccccCcEEeeCCcc
Confidence            986432                 12578999999999987 56778999999999874

>PRK07063 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.2e-37  Score=275.45  Aligned_cols=228  Identities=27%  Similarity=0.295  Sum_probs=200.9

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhh--CCCceeEEEeeCCCHHHHHHHHHHHHhh
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSE--KGLPVNFFQLDVSDPSSIEAFVSWFKSN  104 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~--~~~~~~~~~~Dlt~~~~~~~~~~~~~~~  104 (302)
                      .+++|+++||||++|||+++++.|+++|++|++++|+.+++++..+++.+  .+.++.++.+|++|++++.++++++.+.
T Consensus         4 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   83 (260)
T PRK07063          4 RLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEA   83 (260)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence            47899999999999999999999999999999999999998888888876  3557889999999999999999999999


Q ss_pred             CCCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCccccccc
Q 022103          105 FAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSIL  183 (302)
Q Consensus       105 ~g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~  183 (302)
                      ++++|++|||||.... .+.+.+.++|++++++|+.++++++++++|.|.++ +.++||++||..+..+.+         
T Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~~---------  153 (260)
T PRK07063         84 FGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVER-GRGSIVNIASTHAFKIIP---------  153 (260)
T ss_pred             hCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhh-CCeEEEEECChhhccCCC---------
Confidence            9999999999997543 45678899999999999999999999999999876 568999999987764422         


Q ss_pred             chhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC-
Q 022103          184 EDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ-  262 (302)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~-  262 (302)
                                                       .+.+|++||+|+++++++++.|++++|||||+|+||+++|++.... 
T Consensus       154 ---------------------------------~~~~Y~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~  200 (260)
T PRK07063        154 ---------------------------------GCFPYPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWW  200 (260)
T ss_pred             ---------------------------------CchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhhh
Confidence                                             2367999999999999999999999999999999999999985321 


Q ss_pred             --------------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          263 --------------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       263 --------------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                                          ...+|+++|..+++|+. +...+++|+.+..+|...
T Consensus       201 ~~~~~~~~~~~~~~~~~~~~r~~~~~~va~~~~fl~s-~~~~~itG~~i~vdgg~~  255 (260)
T PRK07063        201 NAQPDPAAARAETLALQPMKRIGRPEEVAMTAVFLAS-DEAPFINATCITIDGGRS  255 (260)
T ss_pred             hccCChHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcC-ccccccCCcEEEECCCee
Confidence                                12579999999999987 667789999999998754

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=100.00  E-value=4.7e-37  Score=277.00  Aligned_cols=226  Identities=23%  Similarity=0.224  Sum_probs=193.7

Q ss_pred             cccCcEEEEeCCC--chHHHHHHHHHHHcCCEEEEEecChh--hHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHH
Q 022103           27 WSKETIAIVTGAN--KGIGFALVKRLAELGLTVILTARDVE--RGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFK  102 (302)
Q Consensus        27 ~~~~k~vlItGas--~gIG~ala~~l~~~G~~V~l~~r~~~--~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~  102 (302)
                      ++++|+++||||+  +|||+++|++|+++|++|+++.|+.+  +.++..+++.+.+.++.++.+|++|+++++++++++.
T Consensus         3 ~l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~   82 (258)
T PRK07370          3 DLTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIK   82 (258)
T ss_pred             ccCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHH
Confidence            4789999999986  89999999999999999998877543  4455666666555567789999999999999999999


Q ss_pred             hhCCCccEEEEcCCCCC-----CCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCc
Q 022103          103 SNFAALDILVNNAGVSF-----NDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNP  177 (302)
Q Consensus       103 ~~~g~id~lv~~aG~~~-----~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~  177 (302)
                      +++|++|++|||||...     .++.+.+.++|++++++|+.++++++++++|.|.+   .++||++||..+..+.    
T Consensus        83 ~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~---~g~Iv~isS~~~~~~~----  155 (258)
T PRK07370         83 QKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSE---GGSIVTLTYLGGVRAI----  155 (258)
T ss_pred             HHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhh---CCeEEEEeccccccCC----
Confidence            99999999999999753     35678899999999999999999999999999964   3899999998776432    


Q ss_pred             ccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCC
Q 022103          178 NIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTS  257 (302)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~  257 (302)
                                                            +.+..|++||+|+++|+++|+.|++++||+||+|+||+++|+
T Consensus       156 --------------------------------------~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~  197 (258)
T PRK07370        156 --------------------------------------PNYNVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTL  197 (258)
T ss_pred             --------------------------------------cccchhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCc
Confidence                                                  224789999999999999999999999999999999999999


Q ss_pred             CCCCC-----------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          258 MTQGQ-----------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       258 ~~~~~-----------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                      +....                 +...|++++..+.+|++ +...+++|+.+..++...
T Consensus       198 ~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~fl~s-~~~~~~tG~~i~vdgg~~  254 (258)
T PRK07370        198 ASSAVGGILDMIHHVEEKAPLRRTVTQTEVGNTAAFLLS-DLASGITGQTIYVDAGYC  254 (258)
T ss_pred             hhhccccchhhhhhhhhcCCcCcCCCHHHHHHHHHHHhC-hhhccccCcEEEECCccc
Confidence            75321                 12568999999999997 677889999999988743

>PRK07478 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1e-36  Score=273.15  Aligned_cols=230  Identities=27%  Similarity=0.286  Sum_probs=202.6

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+++++..+++.+.+.++.++.+|++++++++++++++.++++
T Consensus         3 ~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (254)
T PRK07478          3 RLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFG   82 (254)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence            46789999999999999999999999999999999999999988888887777889999999999999999999999999


Q ss_pred             CccEEEEcCCCCC--CCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccc
Q 022103          107 ALDILVNNAGVSF--NDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILE  184 (302)
Q Consensus       107 ~id~lv~~aG~~~--~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~  184 (302)
                      ++|+||||||...  .++.+.+.++|++++++|+.++++++++++|.|.+. +.++||++||..+....           
T Consensus        83 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~-~~~~iv~~sS~~~~~~~-----------  150 (254)
T PRK07478         83 GLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLAR-GGGSLIFTSTFVGHTAG-----------  150 (254)
T ss_pred             CCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCceEEEEechHhhccC-----------
Confidence            9999999999753  356788999999999999999999999999999876 57899999998764210           


Q ss_pred             hhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCCC-
Q 022103          185 DEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQG-  263 (302)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~~-  263 (302)
                                                    .+.+.+|++||++++.++++++.|+.++||+|++|+||+++|+|.+... 
T Consensus       151 ------------------------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~  200 (254)
T PRK07478        151 ------------------------------FPGMAAYAASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAMGD  200 (254)
T ss_pred             ------------------------------CCCcchhHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCcccccccC
Confidence                                          1224789999999999999999999999999999999999999865421 


Q ss_pred             ----------------CCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcccC
Q 022103          264 ----------------SHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVK  299 (302)
Q Consensus       264 ----------------~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  299 (302)
                                      ..+|+++|..+++|+. +...+++|..+..++....
T Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s-~~~~~~~G~~~~~dgg~~~  251 (254)
T PRK07478        201 TPEALAFVAGLHALKRMAQPEEIAQAALFLAS-DAASFVTGTALLVDGGVSI  251 (254)
T ss_pred             CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcC-chhcCCCCCeEEeCCchhc
Confidence                            2479999999999986 5667899999999987543

>PRK08589 short chain dehydrogenase; Validated

Probab=100.00  E-value=1.1e-36  Score=276.33  Aligned_cols=225  Identities=26%  Similarity=0.365  Sum_probs=199.3

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      +++|++|||||++|||+++|++|+++|++|++++|+ +++++..+++.+.+.++.++.+|+++++++.++++++.+.+++
T Consensus         4 l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~   82 (272)
T PRK08589          4 LENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGR   82 (272)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCC
Confidence            678999999999999999999999999999999999 7888888888776778899999999999999999999999999


Q ss_pred             ccEEEEcCCCCC--CCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccch
Q 022103          108 LDILVNNAGVSF--NDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILED  185 (302)
Q Consensus       108 id~lv~~aG~~~--~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~  185 (302)
                      +|+||||||...  .++.+.+.+.|++++++|+.++++++++++|+|.++  .++||++||..+..+.+           
T Consensus        83 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~-----------  149 (272)
T PRK08589         83 VDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQ--GGSIINTSSFSGQAADL-----------  149 (272)
T ss_pred             cCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc--CCEEEEeCchhhcCCCC-----------
Confidence            999999999864  256778999999999999999999999999999876  38999999988765432           


Q ss_pred             hhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC---
Q 022103          186 EELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ---  262 (302)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~---  262 (302)
                                                     ...+|++||+|++.|+++++.|+.++||+||+|+||+|+|+|....   
T Consensus       150 -------------------------------~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~  198 (272)
T PRK08589        150 -------------------------------YRSGYNAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGT  198 (272)
T ss_pred             -------------------------------CCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhhccc
Confidence                                           2367999999999999999999999999999999999999985421   


Q ss_pred             --------------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          263 --------------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       263 --------------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                                          ...+|+++|..+++|+. +...+++|+++..++...
T Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s-~~~~~~~G~~i~vdgg~~  253 (272)
T PRK08589        199 SEDEAGKTFRENQKWMTPLGRLGKPEEVAKLVVFLAS-DDSSFITGETIRIDGGVM  253 (272)
T ss_pred             chhhHHHHHhhhhhccCCCCCCcCHHHHHHHHHHHcC-chhcCcCCCEEEECCCcc
Confidence                                12469999999999987 567789999999888754

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=7.9e-37  Score=275.98  Aligned_cols=226  Identities=19%  Similarity=0.187  Sum_probs=191.5

Q ss_pred             ccCcEEEEeCC--CchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           28 SKETIAIVTGA--NKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        28 ~~~k~vlItGa--s~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      +++|+++||||  ++|||+++|++|+++|++|++++|+. +.++..+++....+....+++|++|+++++++++++.+++
T Consensus         4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   82 (261)
T PRK08690          4 LQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVD-KLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHW   82 (261)
T ss_pred             cCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHh
Confidence            68999999997  67999999999999999999988863 4445555555443345679999999999999999999999


Q ss_pred             CCccEEEEcCCCCCC-----C-CCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCccc
Q 022103          106 AALDILVNNAGVSFN-----D-IYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNI  179 (302)
Q Consensus       106 g~id~lv~~aG~~~~-----~-~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~  179 (302)
                      +++|++|||||+...     + +.+.+.++|+.++++|++++++++++++|.|.++  .++||++||..+..+.      
T Consensus        83 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~--~g~Iv~iss~~~~~~~------  154 (261)
T PRK08690         83 DGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGR--NSAIVALSYLGAVRAI------  154 (261)
T ss_pred             CCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhc--CcEEEEEcccccccCC------
Confidence            999999999998642     1 3467889999999999999999999999998654  4899999998876432      


Q ss_pred             ccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCC
Q 022103          180 KSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMT  259 (302)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~  259 (302)
                                                          +++.+|++||+|+++|+++++.|++++|||||+|+||+|+|+|.
T Consensus       155 ------------------------------------~~~~~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~  198 (261)
T PRK08690        155 ------------------------------------PNYNVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAA  198 (261)
T ss_pred             ------------------------------------CCcccchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhh
Confidence                                                23478999999999999999999999999999999999999985


Q ss_pred             CCC-----------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcccC
Q 022103          260 QGQ-----------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVK  299 (302)
Q Consensus       260 ~~~-----------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  299 (302)
                      ...                 +..+|+|+|..+.+|+. +...+++|+.+..++....
T Consensus       199 ~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~~l~s-~~~~~~tG~~i~vdgG~~~  254 (261)
T PRK08690        199 SGIADFGKLLGHVAAHNPLRRNVTIEEVGNTAAFLLS-DLSSGITGEITYVDGGYSI  254 (261)
T ss_pred             hcCCchHHHHHHHhhcCCCCCCCCHHHHHHHHHHHhC-cccCCcceeEEEEcCCccc
Confidence            321                 12579999999999997 6677899999999998643

>PRK07062 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-36  Score=273.83  Aligned_cols=229  Identities=26%  Similarity=0.298  Sum_probs=201.4

Q ss_pred             cccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhC--CCceeEEEeeCCCHHHHHHHHHHHH
Q 022103           25 KWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEK--GLPVNFFQLDVSDPSSIEAFVSWFK  102 (302)
Q Consensus        25 ~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dlt~~~~~~~~~~~~~  102 (302)
                      ..++++|+++||||++|||+++++.|+++|++|++++|+.+++++..+++.+.  +.++.++.+|++|.++++++++++.
T Consensus         3 ~~~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   82 (265)
T PRK07062          3 QIQLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVE   82 (265)
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHH
Confidence            45688999999999999999999999999999999999999888888877654  2467889999999999999999999


Q ss_pred             hhCCCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCccccc
Q 022103          103 SNFAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKS  181 (302)
Q Consensus       103 ~~~g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~  181 (302)
                      +.++++|+||||||.... ++.+.+.++|++.+++|+++++.+++.++|.|+++ +.++||++||..+..+.+       
T Consensus        83 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~~-------  154 (265)
T PRK07062         83 ARFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRAS-AAASIVCVNSLLALQPEP-------  154 (265)
T ss_pred             HhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcc-CCcEEEEeccccccCCCC-------
Confidence            999999999999997643 57788999999999999999999999999999876 568999999998865432       


Q ss_pred             ccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCC
Q 022103          182 ILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG  261 (302)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~  261 (302)
                                                         .+..|+++|+|+++++++++.|+.++||+||+|+||+++|+++..
T Consensus       155 -----------------------------------~~~~y~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~  199 (265)
T PRK07062        155 -----------------------------------HMVATSAARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQWRR  199 (265)
T ss_pred             -----------------------------------CchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccchhhh
Confidence                                               236799999999999999999999999999999999999987531


Q ss_pred             C---------------------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          262 Q---------------------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       262 ~---------------------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                      .                           ...+|+++|..+++|+. +...+++|+.+..++..
T Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~~va~~~~~L~s-~~~~~~tG~~i~vdgg~  261 (265)
T PRK07062        200 RYEARADPGQSWEAWTAALARKKGIPLGRLGRPDEAARALFFLAS-PLSSYTTGSHIDVSGGF  261 (265)
T ss_pred             HHHHhhccCCChHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHHhC-chhcccccceEEEcCce
Confidence            0                           12479999999999986 66778999999999873

>PRK07791 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-36  Score=278.43  Aligned_cols=227  Identities=25%  Similarity=0.274  Sum_probs=199.1

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecCh---------hhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHH
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDV---------ERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFV   98 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~---------~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~   98 (302)
                      +++|+++||||++|||+++|++|+++|++|++++|+.         +++++..+++...+.++.++.+|++|++++.+++
T Consensus         4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~   83 (286)
T PRK07791          4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLV   83 (286)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHH
Confidence            6789999999999999999999999999999998876         6777888888776778889999999999999999


Q ss_pred             HHHHhhCCCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCC-----CCCcEEEecCCCcccc
Q 022103           99 SWFKSNFAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSP-----SKSRILNISSRLGTLS  172 (302)
Q Consensus        99 ~~~~~~~g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~-----~~~~iv~vsS~~~~~~  172 (302)
                      +++.+.++++|+||||||+... ++.+.+.++|++++++|+.++++++++++|+|.+..     ..++||++||..+..+
T Consensus        84 ~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~  163 (286)
T PRK07791         84 DAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQG  163 (286)
T ss_pred             HHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhCcC
Confidence            9999999999999999998654 577899999999999999999999999999997542     1379999999888755


Q ss_pred             cccCcccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecC
Q 022103          173 KVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPG  252 (302)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG  252 (302)
                      .+                                          ++..|++||+|+++|+++|+.|++++|||||+|+||
T Consensus       164 ~~------------------------------------------~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg  201 (286)
T PRK07791        164 SV------------------------------------------GQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA  201 (286)
T ss_pred             CC------------------------------------------CchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC
Confidence            32                                          247899999999999999999999999999999999


Q ss_pred             cccCCCCCCC-------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          253 FTQTSMTQGQ-------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       253 ~v~T~~~~~~-------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                       +.|+|....             ...+|+++|..+++|+. +...+++|+++..+|...
T Consensus       202 -~~T~~~~~~~~~~~~~~~~~~~~~~~pedva~~~~~L~s-~~~~~itG~~i~vdgG~~  258 (286)
T PRK07791        202 -ARTRMTETVFAEMMAKPEEGEFDAMAPENVSPLVVWLGS-AESRDVTGKVFEVEGGKI  258 (286)
T ss_pred             -CCCCcchhhHHHHHhcCcccccCCCCHHHHHHHHHHHhC-chhcCCCCcEEEEcCCce
Confidence             788885321             13589999999999987 567789999999998753

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.4e-36  Score=273.91  Aligned_cols=224  Identities=16%  Similarity=0.182  Sum_probs=191.0

Q ss_pred             ccccCcEEEEeCCC--chHHHHHHHHHHHcCCEEEEEecCh---hhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHH
Q 022103           26 WWSKETIAIVTGAN--KGIGFALVKRLAELGLTVILTARDV---ERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSW  100 (302)
Q Consensus        26 ~~~~~k~vlItGas--~gIG~ala~~l~~~G~~V~l~~r~~---~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~  100 (302)
                      .++++|+++||||+  +|||+++|++|+++|++|++++|+.   +.+++..+++.  +.++.++++|++|++++++++++
T Consensus         3 ~~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~   80 (257)
T PRK08594          3 LSLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLE--GQESLLLPCDVTSDEEITACFET   80 (257)
T ss_pred             cccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcC--CCceEEEecCCCCHHHHHHHHHH
Confidence            45789999999997  8999999999999999999998764   33444444432  45788899999999999999999


Q ss_pred             HHhhCCCccEEEEcCCCCC-----CCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCccccccc
Q 022103          101 FKSNFAALDILVNNAGVSF-----NDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVR  175 (302)
Q Consensus       101 ~~~~~g~id~lv~~aG~~~-----~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~  175 (302)
                      +.+++|++|++|||||...     .++.+.+.++|+..+++|+.++++++++++|.|.+   .++||++||..+..+.+ 
T Consensus        81 ~~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~g~Iv~isS~~~~~~~~-  156 (257)
T PRK08594         81 IKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTE---GGSIVTLTYLGGERVVQ-  156 (257)
T ss_pred             HHHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhccc---CceEEEEcccCCccCCC-
Confidence            9999999999999999753     24677899999999999999999999999999964   48999999998865432 


Q ss_pred             CcccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCccc
Q 022103          176 NPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQ  255 (302)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~  255 (302)
                                                               .+.+|++||+|+++|+++|+.|++++|||||+|+||+++
T Consensus       157 -----------------------------------------~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~  195 (257)
T PRK08594        157 -----------------------------------------NYNVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIR  195 (257)
T ss_pred             -----------------------------------------CCchhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCccc
Confidence                                                     246899999999999999999999999999999999999


Q ss_pred             CCCCCCC-----------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          256 TSMTQGQ-----------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       256 T~~~~~~-----------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                      |++....                 +..+|+++|..+++|+. +...+++|+.+..++..
T Consensus       196 T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~~va~~~~~l~s-~~~~~~tG~~~~~dgg~  253 (257)
T PRK08594        196 TLSAKGVGGFNSILKEIEERAPLRRTTTQEEVGDTAAFLFS-DLSRGVTGENIHVDSGY  253 (257)
T ss_pred             CHhHhhhccccHHHHHHhhcCCccccCCHHHHHHHHHHHcC-cccccccceEEEECCch
Confidence            9874311                 23679999999999997 67788999999998874

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=3.5e-37  Score=277.62  Aligned_cols=193  Identities=34%  Similarity=0.485  Sum_probs=174.8

Q ss_pred             cccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCC-C-ceeEEEeeCCCHHHHHHHHHHHH
Q 022103           25 KWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKG-L-PVNFFQLDVSDPSSIEAFVSWFK  102 (302)
Q Consensus        25 ~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~-~-~~~~~~~Dlt~~~~~~~~~~~~~  102 (302)
                      ...+.||+|+|||||+|||+++|+.|+++|++++++.|..++++.+.++|.+.+ . ++.++++|++|++++.++++++.
T Consensus         7 ~e~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~   86 (282)
T KOG1205|consen    7 MERLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAI   86 (282)
T ss_pred             HHHhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHH
Confidence            456899999999999999999999999999999999999999999988887764 2 48999999999999999999999


Q ss_pred             hhCCCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCccccc
Q 022103          103 SNFAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKS  181 (302)
Q Consensus       103 ~~~g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~  181 (302)
                      ++||++|+||||||+... .....+.+++..+|++|++|+..++|+++|+|++++ .|+||+++|++|..+.+.      
T Consensus        87 ~~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~-~GhIVvisSiaG~~~~P~------  159 (282)
T KOG1205|consen   87 RHFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRN-DGHIVVISSIAGKMPLPF------  159 (282)
T ss_pred             HhcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcC-CCeEEEEeccccccCCCc------
Confidence            999999999999998765 357788899999999999999999999999999984 799999999999877543      


Q ss_pred             ccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCC--cEEEEeecCcccCCCC
Q 022103          182 ILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEG--ISVNSYCPGFTQTSMT  259 (302)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~g--I~V~~v~PG~v~T~~~  259 (302)
                                                          ...|++||+|+++|..+|+.|+...+  |++ .|+||+|+|++.
T Consensus       160 ------------------------------------~~~Y~ASK~Al~~f~etLR~El~~~~~~i~i-~V~PG~V~Te~~  202 (282)
T KOG1205|consen  160 ------------------------------------RSIYSASKHALEGFFETLRQELIPLGTIIII-LVSPGPIETEFT  202 (282)
T ss_pred             ------------------------------------ccccchHHHHHHHHHHHHHHHhhccCceEEE-EEecCceeeccc
Confidence                                                36899999999999999999998877  566 999999999975


Q ss_pred             CC
Q 022103          260 QG  261 (302)
Q Consensus       260 ~~  261 (302)
                      ..
T Consensus       203 ~~  204 (282)
T KOG1205|consen  203 GK  204 (282)
T ss_pred             ch
Confidence            54

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=100.00  E-value=1.7e-36  Score=279.37  Aligned_cols=228  Identities=19%  Similarity=0.182  Sum_probs=191.8

Q ss_pred             ccccccCcEEEEeCC--CchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhC----------CC---ceeEEEeeC
Q 022103           24 TKWWSKETIAIVTGA--NKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEK----------GL---PVNFFQLDV   88 (302)
Q Consensus        24 ~~~~~~~k~vlItGa--s~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~----------~~---~~~~~~~Dl   88 (302)
                      +.++++||++||||+  ++|||+++|+.|+++|++|++ +|+.++++.+...+...          +.   ....+.+|+
T Consensus         3 ~~~~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   81 (303)
T PLN02730          3 LPIDLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDA   81 (303)
T ss_pred             CCcCCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecce
Confidence            456799999999999  899999999999999999998 78888887777666431          11   146788898


Q ss_pred             --CC------------------HHHHHHHHHHHHhhCCCccEEEEcCCCCC---CCCCCCCHHHHHHHHHhhhhHHHHHH
Q 022103           89 --SD------------------PSSIEAFVSWFKSNFAALDILVNNAGVSF---NDIYKNTVEHAETVIRTNFYGAKLLT  145 (302)
Q Consensus        89 --t~------------------~~~~~~~~~~~~~~~g~id~lv~~aG~~~---~~~~~~~~e~~~~~~~vn~~~~~~l~  145 (302)
                        ++                  +++++++++++.+++|++|+||||||...   .++.+.+.++|++++++|++++++++
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~  161 (303)
T PLN02730         82 VFDTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLL  161 (303)
T ss_pred             ecCccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHH
Confidence              43                  34899999999999999999999997532   36788999999999999999999999


Q ss_pred             HHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhH
Q 022103          146 ESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSK  225 (302)
Q Consensus       146 ~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK  225 (302)
                      |+++|.|.+.   |+||++||..+..+.                                         |.++..|++||
T Consensus       162 ~~~~p~m~~~---G~II~isS~a~~~~~-----------------------------------------p~~~~~Y~asK  197 (303)
T PLN02730        162 QHFGPIMNPG---GASISLTYIASERII-----------------------------------------PGYGGGMSSAK  197 (303)
T ss_pred             HHHHHHHhcC---CEEEEEechhhcCCC-----------------------------------------CCCchhhHHHH
Confidence            9999999753   999999998876442                                         22234799999


Q ss_pred             HHHHHHHHHHHHHccC-CCcEEEEeecCcccCCCCCCC-----------------CCCCHHHHHHHHHHHhhcCCCCCCC
Q 022103          226 LALNAYTMVLAKRYEG-EGISVNSYCPGFTQTSMTQGQ-----------------GSHTADEAADVGARLLLLHPQQLPT  287 (302)
Q Consensus       226 ~a~~~~~~~la~e~~~-~gI~V~~v~PG~v~T~~~~~~-----------------~~~~~~~~a~~~~~l~~~~~~~~~~  287 (302)
                      +|+++|+++|+.|+++ +|||||+|+||+|+|+|.+..                 ....|++++..+++|++ +...+++
T Consensus       198 aAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~r~~~peevA~~~~fLaS-~~a~~it  276 (303)
T PLN02730        198 AALESDTRVLAFEAGRKYKIRVNTISAGPLGSRAAKAIGFIDDMIEYSYANAPLQKELTADEVGNAAAFLAS-PLASAIT  276 (303)
T ss_pred             HHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCchhhcccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC-ccccCcc
Confidence            9999999999999986 799999999999999986521                 12579999999999997 6778899


Q ss_pred             cceeecCCcc
Q 022103          288 AKFYIGLDPF  297 (302)
Q Consensus       288 G~~~~~~~~~  297 (302)
                      |.++..++..
T Consensus       277 G~~l~vdGG~  286 (303)
T PLN02730        277 GATIYVDNGL  286 (303)
T ss_pred             CCEEEECCCc
Confidence            9999888764

>PRK06114 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.2e-36  Score=269.48  Aligned_cols=230  Identities=25%  Similarity=0.283  Sum_probs=201.0

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChh-hHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhh
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVE-RGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSN  104 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~-~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~  104 (302)
                      +++++|+++||||++|||+++|++|+++|++|++++|+.+ .+++..+++...+.++.++.+|++|+++++++++++.+.
T Consensus         4 ~~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   83 (254)
T PRK06114          4 FDLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAE   83 (254)
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999764 456777777766677889999999999999999999999


Q ss_pred             CCCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCccccccc
Q 022103          105 FAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSIL  183 (302)
Q Consensus       105 ~g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~  183 (302)
                      ++++|+||||||.... ++.+.+.++|++++++|+.+++++++++++.|.++ +.++||++||..+..+.+..       
T Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~isS~~~~~~~~~~-------  155 (254)
T PRK06114         84 LGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLEN-GGGSIVNIASMSGIIVNRGL-------  155 (254)
T ss_pred             cCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhc-CCcEEEEECchhhcCCCCCC-------
Confidence            9999999999998644 56778999999999999999999999999999876 56899999998887543221       


Q ss_pred             chhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC-
Q 022103          184 EDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ-  262 (302)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~-  262 (302)
                                                       .+..|+++|+|+++++++++.|+.++||+||.|+||+++|+|.... 
T Consensus       156 ---------------------------------~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~~~  202 (254)
T PRK06114        156 ---------------------------------LQAHYNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTRPE  202 (254)
T ss_pred             ---------------------------------CcchHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCccccccc
Confidence                                             1367999999999999999999999999999999999999986421 


Q ss_pred             ---------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          263 ---------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       263 ---------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                                     +..+|++++..+++|+. +...+++|+++..++..
T Consensus       203 ~~~~~~~~~~~~p~~r~~~~~dva~~~~~l~s-~~~~~~tG~~i~~dgg~  251 (254)
T PRK06114        203 MVHQTKLFEEQTPMQRMAKVDEMVGPAVFLLS-DAASFCTGVDLLVDGGF  251 (254)
T ss_pred             chHHHHHHHhcCCCCCCcCHHHHHHHHHHHcC-ccccCcCCceEEECcCE
Confidence                           12568999999999987 67789999999999875

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.8e-36  Score=274.24  Aligned_cols=224  Identities=19%  Similarity=0.182  Sum_probs=188.4

Q ss_pred             ccCcEEEEeCCC--chHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           28 SKETIAIVTGAN--KGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        28 ~~~k~vlItGas--~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      +++|+++||||+  +|||+++|+.|+++|++|++++|+. +..+.++++.+.-+....+++|++|+++++++++++.+++
T Consensus         8 ~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~-~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   86 (272)
T PRK08159          8 MAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGD-ALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKW   86 (272)
T ss_pred             ccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCch-HHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhc
Confidence            578999999997  8999999999999999999998874 2233333333221235678999999999999999999999


Q ss_pred             CCccEEEEcCCCCC-----CCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccc
Q 022103          106 AALDILVNNAGVSF-----NDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIK  180 (302)
Q Consensus       106 g~id~lv~~aG~~~-----~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~  180 (302)
                      +++|++|||||...     .++.+.+.++|+.++++|+.++++++++++|.|.+   .|+||++||..+..+.       
T Consensus        87 g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~---~g~Iv~iss~~~~~~~-------  156 (272)
T PRK08159         87 GKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTD---GGSILTLTYYGAEKVM-------  156 (272)
T ss_pred             CCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCC---CceEEEEeccccccCC-------
Confidence            99999999999763     24678899999999999999999999999999864   4899999997765332       


Q ss_pred             cccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCC
Q 022103          181 SILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ  260 (302)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~  260 (302)
                                                         +.+..|++||+|+++|+++|+.|+.++|||||+|+||+++|+|..
T Consensus       157 -----------------------------------p~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~  201 (272)
T PRK08159        157 -----------------------------------PHYNVMGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAAS  201 (272)
T ss_pred             -----------------------------------CcchhhhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHh
Confidence                                               234789999999999999999999999999999999999998752


Q ss_pred             CC-----------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          261 GQ-----------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       261 ~~-----------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                      ..                 +..+|+|+|..+++|++ +...+++|.++..++...
T Consensus       202 ~~~~~~~~~~~~~~~~p~~r~~~peevA~~~~~L~s-~~~~~itG~~i~vdgG~~  255 (272)
T PRK08159        202 GIGDFRYILKWNEYNAPLRRTVTIEEVGDSALYLLS-DLSRGVTGEVHHVDSGYH  255 (272)
T ss_pred             cCCcchHHHHHHHhCCcccccCCHHHHHHHHHHHhC-ccccCccceEEEECCCce
Confidence            11                 12579999999999997 667889999999999864

>PRK07985 oxidoreductase; Provisional

Probab=100.00  E-value=8e-36  Score=274.14  Aligned_cols=250  Identities=24%  Similarity=0.209  Sum_probs=208.4

Q ss_pred             CCCCCCCccccCCCCCcccccccccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecCh--hhHHHHHHHHhhCCCc
Q 022103            3 SQEPDPNYFSSSSSSSSLVSSTKWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDV--ERGQRAVESLSEKGLP   80 (302)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~--~~~~~~~~~l~~~~~~   80 (302)
                      +++..+.++++...+........-.+++|+++||||++|||+++|++|+++|++|++++|+.  +..+...+.+.+.+.+
T Consensus        22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~  101 (294)
T PRK07985         22 PTPGIQAKMTPVPDCGEKTYVGSGRLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRK  101 (294)
T ss_pred             cccCcccccCCcccccccccccCCccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCe
Confidence            44566666666665665444334458999999999999999999999999999999988753  3455555556555667


Q ss_pred             eeEEEeeCCCHHHHHHHHHHHHhhCCCccEEEEcCCCCC--CCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCC
Q 022103           81 VNFFQLDVSDPSSIEAFVSWFKSNFAALDILVNNAGVSF--NDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSK  158 (302)
Q Consensus        81 ~~~~~~Dlt~~~~~~~~~~~~~~~~g~id~lv~~aG~~~--~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~  158 (302)
                      +.++.+|+++.+++.++++++.+.++++|++|||||...  .++.+.+.++|++++++|+.++++++++++|.|++   .
T Consensus       102 ~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~---~  178 (294)
T PRK07985        102 AVLLPGDLSDEKFARSLVHEAHKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPK---G  178 (294)
T ss_pred             EEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhc---C
Confidence            888999999999999999999999999999999999753  35778899999999999999999999999999864   3


Q ss_pred             CcEEEecCCCcccccccCcccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHH
Q 022103          159 SRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKR  238 (302)
Q Consensus       159 ~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e  238 (302)
                      ++||++||..+..+.+                                          .+.+|+++|+|++.++++++.|
T Consensus       179 g~iv~iSS~~~~~~~~------------------------------------------~~~~Y~asKaal~~l~~~la~e  216 (294)
T PRK07985        179 ASIITTSSIQAYQPSP------------------------------------------HLLDYAATKAAILNYSRGLAKQ  216 (294)
T ss_pred             CEEEEECCchhccCCC------------------------------------------CcchhHHHHHHHHHHHHHHHHH
Confidence            8999999988764432                                          2367999999999999999999


Q ss_pred             ccCCCcEEEEeecCcccCCCCCCC-----------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          239 YEGEGISVNSYCPGFTQTSMTQGQ-----------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       239 ~~~~gI~V~~v~PG~v~T~~~~~~-----------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                      ++++||+||+|+||+|+|+|....                 ....|+++|..+.+|+. +...+++|..+..++...
T Consensus       217 l~~~gIrvn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~pedva~~~~fL~s-~~~~~itG~~i~vdgG~~  292 (294)
T PRK07985        217 VAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLAS-QESSYVTAEVHGVCGGEH  292 (294)
T ss_pred             HhHhCcEEEEEECCcCccccccccCCCHHHHHHHhccCCCCCCCCHHHHHHHHHhhhC-hhcCCccccEEeeCCCee
Confidence            999999999999999999974210                 13679999999999987 677889999999998754

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=4.2e-36  Score=268.79  Aligned_cols=212  Identities=23%  Similarity=0.326  Sum_probs=195.4

Q ss_pred             ccccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHh
Q 022103           24 TKWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKS  103 (302)
Q Consensus        24 ~~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~  103 (302)
                      ...+.+|++||||||++|||+++|++|+++|+++++++.+.+..++.++++++.| ++..+.||+++.+++.+.++++++
T Consensus        32 ~~k~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g-~~~~y~cdis~~eei~~~a~~Vk~  110 (300)
T KOG1201|consen   32 PLKSVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIG-EAKAYTCDISDREEIYRLAKKVKK  110 (300)
T ss_pred             chhhccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcC-ceeEEEecCCCHHHHHHHHHHHHH
Confidence            5677899999999999999999999999999999999999999999999998875 899999999999999999999999


Q ss_pred             hCCCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccc
Q 022103          104 NFAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSI  182 (302)
Q Consensus       104 ~~g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~  182 (302)
                      +.|.+|+||||||+... ++.+.+.++++.++++|+.|+++.+++|+|.|.++ ..|+||+|+|++|..+.+        
T Consensus       111 e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~-~~GHIV~IaS~aG~~g~~--------  181 (300)
T KOG1201|consen  111 EVGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLEN-NNGHIVTIASVAGLFGPA--------  181 (300)
T ss_pred             hcCCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhc-CCceEEEehhhhcccCCc--------
Confidence            99999999999999865 78899999999999999999999999999999998 689999999999998743        


Q ss_pred             cchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHc---cCCCcEEEEeecCcccCCCC
Q 022103          183 LEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRY---EGEGISVNSYCPGFTQTSMT  259 (302)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~---~~~gI~V~~v~PG~v~T~~~  259 (302)
                                                        +..+|++||+|+.+|.++|..|+   ...||+...|+|++++|.|.
T Consensus       182 ----------------------------------gl~~YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tgmf  227 (300)
T KOG1201|consen  182 ----------------------------------GLADYCASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFINTGMF  227 (300)
T ss_pred             ----------------------------------cchhhhhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeecccccc
Confidence                                              34789999999999999999997   35689999999999999998


Q ss_pred             CCC-------CCCCHHHHHHHHHHHhh
Q 022103          260 QGQ-------GSHTADEAADVGARLLL  279 (302)
Q Consensus       260 ~~~-------~~~~~~~~a~~~~~l~~  279 (302)
                      ...       ...+|+++|..++.-..
T Consensus       228 ~~~~~~~~l~P~L~p~~va~~Iv~ai~  254 (300)
T KOG1201|consen  228 DGATPFPTLAPLLEPEYVAKRIVEAIL  254 (300)
T ss_pred             CCCCCCccccCCCCHHHHHHHHHHHHH
Confidence            842       23789999999998876

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=100.00  E-value=4.9e-36  Score=270.11  Aligned_cols=229  Identities=17%  Similarity=0.208  Sum_probs=196.6

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEec-ChhhHHHHHHHHhhC-CCceeEEEeeCCCHHHHHHHHHHHHh
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTAR-DVERGQRAVESLSEK-GLPVNFFQLDVSDPSSIEAFVSWFKS  103 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r-~~~~~~~~~~~l~~~-~~~~~~~~~Dlt~~~~~~~~~~~~~~  103 (302)
                      .++++|+++||||++|||+++|+.|+++|++|++++| +.++++...+++... +.++.++.+|++|+++++++++++.+
T Consensus         4 ~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   83 (260)
T PRK08416          4 NEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDE   83 (260)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999998865 556667666666543 55789999999999999999999999


Q ss_pred             hCCCccEEEEcCCCCC-------CCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccC
Q 022103          104 NFAALDILVNNAGVSF-------NDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRN  176 (302)
Q Consensus       104 ~~g~id~lv~~aG~~~-------~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~  176 (302)
                      +++++|+||||||...       .++.+.+.+++++.+++|+.+++.++++++|.|.+. ..++||++||..+..+.+  
T Consensus        84 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~~--  160 (260)
T PRK08416         84 DFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKV-GGGSIISLSSTGNLVYIE--  160 (260)
T ss_pred             hcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhcc-CCEEEEEEeccccccCCC--
Confidence            9999999999998642       245677889999999999999999999999999876 468999999987654422  


Q ss_pred             cccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccC
Q 022103          177 PNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQT  256 (302)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T  256 (302)
                                                              .+..|++||+|++.++++|+.|+.++||+|++|+||+++|
T Consensus       161 ----------------------------------------~~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T  200 (260)
T PRK08416        161 ----------------------------------------NYAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDT  200 (260)
T ss_pred             ----------------------------------------CcccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccC
Confidence                                                    2467999999999999999999999999999999999999


Q ss_pred             CCCCCC-----------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          257 SMTQGQ-----------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       257 ~~~~~~-----------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                      +|....                 +..+|+++|..+++|+. +...+++|+++..++...
T Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~r~~~p~~va~~~~~l~~-~~~~~~~G~~i~vdgg~~  258 (260)
T PRK08416        201 DALKAFTNYEEVKAKTEELSPLNRMGQPEDLAGACLFLCS-EKASWLTGQTIVVDGGTT  258 (260)
T ss_pred             hhhhhccCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcC-hhhhcccCcEEEEcCCee
Confidence            985432                 13579999999999987 566789999999988753

>PRK08303 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.1e-36  Score=277.65  Aligned_cols=227  Identities=20%  Similarity=0.246  Sum_probs=190.6

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecCh----------hhHHHHHHHHhhCCCceeEEEeeCCCHHHHH
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDV----------ERGQRAVESLSEKGLPVNFFQLDVSDPSSIE   95 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~----------~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~   95 (302)
                      .++++|+++||||++|||+++|++|+++|++|++++|+.          ++++...+++...+.++.++.+|++++++++
T Consensus         4 ~~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~   83 (305)
T PRK08303          4 KPLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVR   83 (305)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHH
Confidence            347899999999999999999999999999999999983          4566677777766667889999999999999


Q ss_pred             HHHHHHHhhCCCccEEEEcC-CCC-----CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCc
Q 022103           96 AFVSWFKSNFAALDILVNNA-GVS-----FNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLG  169 (302)
Q Consensus        96 ~~~~~~~~~~g~id~lv~~a-G~~-----~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~  169 (302)
                      ++++++.+.+|++|++|||| |..     ..++.+.+.++|++++++|+.+++.++++++|.|.++ ..|+||++||..+
T Consensus        84 ~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~-~~g~IV~isS~~~  162 (305)
T PRK08303         84 ALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRR-PGGLVVEITDGTA  162 (305)
T ss_pred             HHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhC-CCcEEEEECCccc
Confidence            99999999999999999999 752     1356778899999999999999999999999999876 4689999999765


Q ss_pred             ccccccCcccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEe
Q 022103          170 TLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSY  249 (302)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v  249 (302)
                      ......                                       ++.+..|++||+|+.+|+++|+.|+++.|||||+|
T Consensus       163 ~~~~~~---------------------------------------~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v  203 (305)
T PRK08303        163 EYNATH---------------------------------------YRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVAL  203 (305)
T ss_pred             cccCcC---------------------------------------CCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEe
Confidence            322111                                       11246799999999999999999999999999999


Q ss_pred             ecCcccCCCCCC------------------CC-CCCHHHHHHHHHHHhhcCCCCCCCcceee
Q 022103          250 CPGFTQTSMTQG------------------QG-SHTADEAADVGARLLLLHPQQLPTAKFYI  292 (302)
Q Consensus       250 ~PG~v~T~~~~~------------------~~-~~~~~~~a~~~~~l~~~~~~~~~~G~~~~  292 (302)
                      +||+|+|+|...                  .+ ..+|+++|..+++|+..+...+++|+++.
T Consensus       204 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~p~~~~~~~peevA~~v~fL~s~~~~~~itG~~l~  265 (305)
T PRK08303        204 TPGWLRSEMMLDAFGVTEENWRDALAKEPHFAISETPRYVGRAVAALAADPDVARWNGQSLS  265 (305)
T ss_pred             cCCccccHHHHHhhccCccchhhhhccccccccCCCHHHHHHHHHHHHcCcchhhcCCcEEE
Confidence            999999997421                  01 14699999999999973334578999986

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=5.9e-36  Score=270.84  Aligned_cols=224  Identities=17%  Similarity=0.174  Sum_probs=190.1

Q ss_pred             ccCcEEEEeCCCc--hHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           28 SKETIAIVTGANK--GIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        28 ~~~k~vlItGas~--gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      +++|+++||||++  |||+++|++|+++|++|++++|+ +++++..+++......+.++.+|++|+++++++++++.+++
T Consensus         4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (262)
T PRK07984          4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQN-DKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVW   82 (262)
T ss_pred             cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecc-hhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhc
Confidence            6899999999986  99999999999999999999987 45555666665544566789999999999999999999999


Q ss_pred             CCccEEEEcCCCCCC-C-----CCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCccc
Q 022103          106 AALDILVNNAGVSFN-D-----IYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNI  179 (302)
Q Consensus       106 g~id~lv~~aG~~~~-~-----~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~  179 (302)
                      |++|++|||||.... .     +.+.+.++|+.++++|+.+++.+++.+.|.+.+   .++||++||..+..+.      
T Consensus        83 g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~g~Iv~iss~~~~~~~------  153 (262)
T PRK07984         83 PKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP---GSALLTLSYLGAERAI------  153 (262)
T ss_pred             CCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcC---CcEEEEEecCCCCCCC------
Confidence            999999999997532 1     456788999999999999999999999987642   4899999998775432      


Q ss_pred             ccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCC
Q 022103          180 KSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMT  259 (302)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~  259 (302)
                                                          +.+.+|++||+|+++|+++++.|++++|||||+|+||+++|+|.
T Consensus       154 ------------------------------------~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~  197 (262)
T PRK07984        154 ------------------------------------PNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAA  197 (262)
T ss_pred             ------------------------------------CCcchhHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHH
Confidence                                                22478999999999999999999999999999999999999874


Q ss_pred             CCC-----------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          260 QGQ-----------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       260 ~~~-----------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                      ...                 ....|++++..+++|+. +...+++|.++..++...
T Consensus       198 ~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~~L~s-~~~~~itG~~i~vdgg~~  252 (262)
T PRK07984        198 SGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCS-DLSAGISGEVVHVDGGFS  252 (262)
T ss_pred             hcCCchHHHHHHHHHcCCCcCCCCHHHHHHHHHHHcC-cccccccCcEEEECCCcc
Confidence            311                 22579999999999987 567789999999988743

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=7.1e-36  Score=269.70  Aligned_cols=223  Identities=20%  Similarity=0.207  Sum_probs=184.2

Q ss_pred             ccCcEEEEeCC--CchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           28 SKETIAIVTGA--NKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        28 ~~~k~vlItGa--s~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      +++|+++||||  ++|||+++|++|+++|++|++++|.... ++..+++.+......++.+|++|+++++++++++.+++
T Consensus         4 l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   82 (260)
T PRK06997          4 LAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRF-KDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHW   82 (260)
T ss_pred             cCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHH-HHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHh
Confidence            67899999996  6899999999999999999998765322 22233332221233578999999999999999999999


Q ss_pred             CCccEEEEcCCCCCC-----C-CCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCccc
Q 022103          106 AALDILVNNAGVSFN-----D-IYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNI  179 (302)
Q Consensus       106 g~id~lv~~aG~~~~-----~-~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~  179 (302)
                      +++|++|||||....     + +.+.+.++|+..+++|+.++++++++++|+|.+   .++||++||..+..+.      
T Consensus        83 g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~---~g~Ii~iss~~~~~~~------  153 (260)
T PRK06997         83 DGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSD---DASLLTLSYLGAERVV------  153 (260)
T ss_pred             CCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCC---CceEEEEeccccccCC------
Confidence            999999999997532     2 346788999999999999999999999999943   4899999998875432      


Q ss_pred             ccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCC
Q 022103          180 KSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMT  259 (302)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~  259 (302)
                                                          +.+.+|++||+|+++|+++|+.|++++|||||+|+||+|+|+|.
T Consensus       154 ------------------------------------~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~  197 (260)
T PRK06997        154 ------------------------------------PNYNTMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAA  197 (260)
T ss_pred             ------------------------------------CCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchh
Confidence                                                22467999999999999999999999999999999999999875


Q ss_pred             CCC-----------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          260 QGQ-----------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       260 ~~~-----------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                      ...                 +..+|++++..+.+|++ +...+++|+.+..++..
T Consensus       198 ~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~~l~s-~~~~~itG~~i~vdgg~  251 (260)
T PRK06997        198 SGIKDFGKILDFVESNAPLRRNVTIEEVGNVAAFLLS-DLASGVTGEITHVDSGF  251 (260)
T ss_pred             ccccchhhHHHHHHhcCcccccCCHHHHHHHHHHHhC-ccccCcceeEEEEcCCh
Confidence            321                 12579999999999987 56788999999998874

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-35  Score=265.82  Aligned_cols=229  Identities=23%  Similarity=0.331  Sum_probs=203.0

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      +++++|++|||||++|||++++++|+++|++|++++|+.+++++..+++...+.++.++.+|++|+++++++++++.+.+
T Consensus         5 ~~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   84 (254)
T PRK08085          5 FSLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDI   84 (254)
T ss_pred             ccCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhc
Confidence            45789999999999999999999999999999999999999888888887766678889999999999999999999999


Q ss_pred             CCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccc
Q 022103          106 AALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILE  184 (302)
Q Consensus       106 g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~  184 (302)
                      +++|++|||+|.... ++.+.+.++|++++++|+.+++++++++.+.|.++ +.++||++||..+..+.+          
T Consensus        85 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~isS~~~~~~~~----------  153 (254)
T PRK08085         85 GPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKR-QAGKIINICSMQSELGRD----------  153 (254)
T ss_pred             CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEEEEccchhccCCC----------
Confidence            999999999997643 56778999999999999999999999999999766 468999999987654422          


Q ss_pred             hhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC--
Q 022103          185 DEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ--  262 (302)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~--  262 (302)
                                                      .+..|+++|++++.++++++.+++++||+||+|+||+++|++....  
T Consensus       154 --------------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~  201 (254)
T PRK08085        154 --------------------------------TITPYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVE  201 (254)
T ss_pred             --------------------------------CCcchHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhcc
Confidence                                            2367999999999999999999999999999999999999986532  


Q ss_pred             ---------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          263 ---------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       263 ---------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                                     ...+|++++..+.+|+. +...+++|..+..++.+.
T Consensus       202 ~~~~~~~~~~~~p~~~~~~~~~va~~~~~l~~-~~~~~i~G~~i~~dgg~~  251 (254)
T PRK08085        202 DEAFTAWLCKRTPAARWGDPQELIGAAVFLSS-KASDFVNGHLLFVDGGML  251 (254)
T ss_pred             CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC-ccccCCcCCEEEECCCee
Confidence                           12569999999999987 678889999999998754

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=100.00  E-value=9.9e-36  Score=270.06  Aligned_cols=232  Identities=32%  Similarity=0.363  Sum_probs=198.6

Q ss_pred             cccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCC---CceeEEEeeCCCHHHHHHHHHHH
Q 022103           25 KWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKG---LPVNFFQLDVSDPSSIEAFVSWF  101 (302)
Q Consensus        25 ~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dlt~~~~~~~~~~~~  101 (302)
                      .+.+++|+++|||+++|||+++|++|+++|++|++++|+.+++++..+.+...+   .++..+.||+++++++++++++.
T Consensus         3 ~~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~   82 (270)
T KOG0725|consen    3 GGRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFA   82 (270)
T ss_pred             CccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHH
Confidence            467899999999999999999999999999999999999999999988877654   35899999999999999999999


Q ss_pred             Hhh-CCCccEEEEcCCCCCC--CCCCCCHHHHHHHHHhhhhH-HHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCc
Q 022103          102 KSN-FAALDILVNNAGVSFN--DIYKNTVEHAETVIRTNFYG-AKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNP  177 (302)
Q Consensus       102 ~~~-~g~id~lv~~aG~~~~--~~~~~~~e~~~~~~~vn~~~-~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~  177 (302)
                      .++ +|++|+||||||....  ++.+.+.++|+.++++|+.| .+.+.+.+.+.+.++ +.+.|+++||..+..+.... 
T Consensus        83 ~~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~-~gg~I~~~ss~~~~~~~~~~-  160 (270)
T KOG0725|consen   83 VEKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKS-KGGSIVNISSVAGVGPGPGS-  160 (270)
T ss_pred             HHHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhc-CCceEEEEeccccccCCCCC-
Confidence            999 7999999999997754  58999999999999999996 555555555555554 68999999999887553221 


Q ss_pred             ccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCC
Q 022103          178 NIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTS  257 (302)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~  257 (302)
                                                              ..+|+++|+|+++|+|++|.|++++|||||+|+||++.|+
T Consensus       161 ----------------------------------------~~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~  200 (270)
T KOG0725|consen  161 ----------------------------------------GVAYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTS  200 (270)
T ss_pred             ----------------------------------------cccchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCC
Confidence                                                    1689999999999999999999999999999999999999


Q ss_pred             CCCCC----------------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcccC
Q 022103          258 MTQGQ----------------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVK  299 (302)
Q Consensus       258 ~~~~~----------------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  299 (302)
                      +....                      +...|++++..+.+|+. +...+++|+.+..++.+..
T Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~p~gr~g~~~eva~~~~fla~-~~asyitG~~i~vdgG~~~  263 (270)
T KOG0725|consen  201 LRAAGLDDGEMEEFKEATDSKGAVPLGRVGTPEEVAEAAAFLAS-DDASYITGQTIIVDGGFTV  263 (270)
T ss_pred             ccccccccchhhHHhhhhccccccccCCccCHHHHHHhHHhhcC-cccccccCCEEEEeCCEEe
Confidence            72200                      12678999999999998 4545999999999998654

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=100.00  E-value=1.5e-35  Score=265.90  Aligned_cols=228  Identities=21%  Similarity=0.245  Sum_probs=196.4

Q ss_pred             cccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhh
Q 022103           25 KWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSN  104 (302)
Q Consensus        25 ~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~  104 (302)
                      .+++++|+++|||+++|||+++|++|+++|++|+++++..  .++..+++.+.+.++..+++|++|.++++++++++.++
T Consensus         5 ~~~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~--~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   82 (253)
T PRK08993          5 AFSLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVE--PTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAE   82 (253)
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcc--hHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            4468899999999999999999999999999999887754  23444555555567889999999999999999999999


Q ss_pred             CCCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCccccccc
Q 022103          105 FAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSIL  183 (302)
Q Consensus       105 ~g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~  183 (302)
                      ++++|++|||||.... ++.+.+.++|++++++|+.+++++++++.|.|.+++..++||++||..+..+.+         
T Consensus        83 ~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---------  153 (253)
T PRK08993         83 FGHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGI---------  153 (253)
T ss_pred             hCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCCC---------
Confidence            9999999999997643 467889999999999999999999999999998764468999999988764422         


Q ss_pred             chhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC-
Q 022103          184 EDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ-  262 (302)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~-  262 (302)
                                                       .+..|+++|+|+++++++++.|+.++||+|++|+||+++|+|.... 
T Consensus       154 ---------------------------------~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~~  200 (253)
T PRK08993        154 ---------------------------------RVPSYTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLR  200 (253)
T ss_pred             ---------------------------------CCcchHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhhhc
Confidence                                             2367999999999999999999999999999999999999986432 


Q ss_pred             ----------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          263 ----------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       263 ----------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                                      +...|+++|..+.+|+. +...+++|.++..++..
T Consensus       201 ~~~~~~~~~~~~~p~~r~~~p~eva~~~~~l~s-~~~~~~~G~~~~~dgg~  250 (253)
T PRK08993        201 ADEQRSAEILDRIPAGRWGLPSDLMGPVVFLAS-SASDYINGYTIAVDGGW  250 (253)
T ss_pred             cchHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC-ccccCccCcEEEECCCE
Confidence                            13579999999999997 67788999999998874

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=100.00  E-value=2.9e-35  Score=267.22  Aligned_cols=230  Identities=25%  Similarity=0.272  Sum_probs=202.0

Q ss_pred             cccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhh
Q 022103           25 KWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSN  104 (302)
Q Consensus        25 ~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~  104 (302)
                      .+++++|+++||||++|||++++++|+++|++|++++|+.+..++..+++.+.+.++.++.+|+++++++.++++++.+.
T Consensus         5 ~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   84 (278)
T PRK08277          5 LFSLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILED   84 (278)
T ss_pred             eeccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            44688999999999999999999999999999999999998888888888776677899999999999999999999999


Q ss_pred             CCCccEEEEcCCCCCC----------------CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCC
Q 022103          105 FAALDILVNNAGVSFN----------------DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRL  168 (302)
Q Consensus       105 ~g~id~lv~~aG~~~~----------------~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~  168 (302)
                      ++++|++|||||...+                ++.+.+.++|++.+++|+.+++.+++++++.|.+. +.++||++||..
T Consensus        85 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~ii~isS~~  163 (278)
T PRK08277         85 FGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGR-KGGNIINISSMN  163 (278)
T ss_pred             cCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-CCcEEEEEccch
Confidence            9999999999996422                25677899999999999999999999999999876 468999999998


Q ss_pred             cccccccCcccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEE
Q 022103          169 GTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNS  248 (302)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~  248 (302)
                      +..+.+.                                          +.+|++||+|+++++++++.+++++||+||+
T Consensus       164 ~~~~~~~------------------------------------------~~~Y~~sK~a~~~l~~~la~e~~~~girvn~  201 (278)
T PRK08277        164 AFTPLTK------------------------------------------VPAYSAAKAAISNFTQWLAVHFAKVGIRVNA  201 (278)
T ss_pred             hcCCCCC------------------------------------------CchhHHHHHHHHHHHHHHHHHhCccCeEEEE
Confidence            8654322                                          3679999999999999999999999999999


Q ss_pred             eecCcccCCCCCCC----------------------CCCCHHHHHHHHHHHhhcC-CCCCCCcceeecCCccc
Q 022103          249 YCPGFTQTSMTQGQ----------------------GSHTADEAADVGARLLLLH-PQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       249 v~PG~v~T~~~~~~----------------------~~~~~~~~a~~~~~l~~~~-~~~~~~G~~~~~~~~~~  298 (302)
                      |+||+++|++.+..                      +..+|+++|..+++|+. + ...+++|+.+..++.+.
T Consensus       202 v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~~l~s-~~~~~~~tG~~i~vdgG~~  273 (278)
T PRK08277        202 IAPGFFLTEQNRALLFNEDGSLTERANKILAHTPMGRFGKPEELLGTLLWLAD-EKASSFVTGVVLPVDGGFS  273 (278)
T ss_pred             EEeccCcCcchhhhhccccccchhHHHHHhccCCccCCCCHHHHHHHHHHHcC-ccccCCcCCCEEEECCCee
Confidence            99999999975421                      12479999999999987 5 67889999999998753

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=2.3e-35  Score=265.12  Aligned_cols=228  Identities=24%  Similarity=0.326  Sum_probs=199.7

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      ..+++|++|||||++|||++++++|+++|++|++++|+ ++.++..+.+.+.+.++.++.+|+++.+++.++++++.+.+
T Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   89 (258)
T PRK06935         11 FSLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEF   89 (258)
T ss_pred             ccCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            45789999999999999999999999999999999998 56666666666666678999999999999999999999999


Q ss_pred             CCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccc
Q 022103          106 AALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILE  184 (302)
Q Consensus       106 g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~  184 (302)
                      +.+|++|||+|.... ++.+.+.++|++.+++|+.+++.+++++++.|.++ +.++||++||..+..+.+          
T Consensus        90 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~~----------  158 (258)
T PRK06935         90 GKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQ-GSGKIINIASMLSFQGGK----------  158 (258)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhc-CCeEEEEECCHHhccCCC----------
Confidence            999999999997643 56778899999999999999999999999999876 468999999988764432          


Q ss_pred             hhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC--
Q 022103          185 DEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ--  262 (302)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~--  262 (302)
                                                      .+.+|+++|++++++++++++|+.++||+||+|+||+++|++....  
T Consensus       159 --------------------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~  206 (258)
T PRK06935        159 --------------------------------FVPAYTASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRA  206 (258)
T ss_pred             --------------------------------CchhhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhhccc
Confidence                                            2367999999999999999999999999999999999999975421  


Q ss_pred             ---------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          263 ---------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       263 ---------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                                     ....|++++..+.+|+. +...+++|.++..++...
T Consensus       207 ~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s-~~~~~~~G~~i~~dgg~~  256 (258)
T PRK06935        207 DKNRNDEILKRIPAGRWGEPDDLMGAAVFLAS-RASDYVNGHILAVDGGWL  256 (258)
T ss_pred             ChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcC-hhhcCCCCCEEEECCCee
Confidence                           23578999999999987 677889999999998754

>PRK07035 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4e-35  Score=262.31  Aligned_cols=229  Identities=24%  Similarity=0.313  Sum_probs=202.5

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      +++++|+++||||++|||++++++|+++|++|++++|+.++++...+++.+.+.++.++.+|+++.++++++++++.+.+
T Consensus         4 ~~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (252)
T PRK07035          4 FDLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERH   83 (252)
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            46889999999999999999999999999999999999988888888887767778899999999999999999999999


Q ss_pred             CCccEEEEcCCCCC--CCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCccccccc
Q 022103          106 AALDILVNNAGVSF--NDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSIL  183 (302)
Q Consensus       106 g~id~lv~~aG~~~--~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~  183 (302)
                      +++|++|||||...  .++.+.+.++++..+++|+.+++.++++++|+|.++ ..++|+++||..+..+.+         
T Consensus        84 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~~sS~~~~~~~~---------  153 (252)
T PRK07035         84 GRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQ-GGGSIVNVASVNGVSPGD---------  153 (252)
T ss_pred             CCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC-CCcEEEEECchhhcCCCC---------
Confidence            99999999999643  356678999999999999999999999999999876 568999999987764422         


Q ss_pred             chhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC-
Q 022103          184 EDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ-  262 (302)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~-  262 (302)
                                                       ++..|++||+++++++++++.|+.++||+|++|+||+++|++.... 
T Consensus       154 ---------------------------------~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~~  200 (252)
T PRK07035        154 ---------------------------------FQGIYSITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTKFASALF  200 (252)
T ss_pred             ---------------------------------CCcchHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCccccccc
Confidence                                             2467999999999999999999999999999999999999986532 


Q ss_pred             ----------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          263 ----------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       263 ----------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                                      +..+|+++|..+.+|+. +...+++|+++..++++.
T Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~-~~~~~~~g~~~~~dgg~~  251 (252)
T PRK07035        201 KNDAILKQALAHIPLRRHAEPSEMAGAVLYLAS-DASSYTTGECLNVDGGYL  251 (252)
T ss_pred             CCHHHHHHHHccCCCCCcCCHHHHHHHHHHHhC-ccccCccCCEEEeCCCcC
Confidence                            23579999999999987 566789999999998754

>PRK06172 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4e-35  Score=262.45  Aligned_cols=229  Identities=25%  Similarity=0.304  Sum_probs=203.1

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      ..+++|+++||||++|||.+++++|+++|++|++++|+.+++++..+++.+.+.++..+.+|+++.+++.++++++.+.+
T Consensus         3 ~~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   82 (253)
T PRK06172          3 MTFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAY   82 (253)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            34789999999999999999999999999999999999988888888887777788999999999999999999999999


Q ss_pred             CCccEEEEcCCCCCC--CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCccccccc
Q 022103          106 AALDILVNNAGVSFN--DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSIL  183 (302)
Q Consensus       106 g~id~lv~~aG~~~~--~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~  183 (302)
                      +++|++|||+|....  ++.+.+.+++++++++|+.++++++++++|.|.++ +.++||++||..+..+.+         
T Consensus        83 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~ii~~sS~~~~~~~~---------  152 (253)
T PRK06172         83 GRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQ-GGGAIVNTASVAGLGAAP---------  152 (253)
T ss_pred             CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEECchhhccCCC---------
Confidence            999999999997543  46778999999999999999999999999999876 468999999988765432         


Q ss_pred             chhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC-
Q 022103          184 EDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ-  262 (302)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~-  262 (302)
                                                       ++..|+++|++++.|+++++.++.++||+|++|+||+++|++.... 
T Consensus       153 ---------------------------------~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~  199 (253)
T PRK06172        153 ---------------------------------KMSIYAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAY  199 (253)
T ss_pred             ---------------------------------CCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhc
Confidence                                             2477999999999999999999999999999999999999996643 


Q ss_pred             -----------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          263 -----------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       263 -----------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                                       ...+|++++..+.+|+. +...+++|+++..+|.+.
T Consensus       200 ~~~~~~~~~~~~~~~~~~~~~p~~ia~~~~~l~~-~~~~~~~G~~i~~dgg~~  251 (253)
T PRK06172        200 EADPRKAEFAAAMHPVGRIGKVEEVASAVLYLCS-DGASFTTGHALMVDGGAT  251 (253)
T ss_pred             ccChHHHHHHhccCCCCCccCHHHHHHHHHHHhC-ccccCcCCcEEEECCCcc
Confidence                             12479999999999987 566789999999999763

>PRK12747 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.2e-35  Score=262.36  Aligned_cols=224  Identities=29%  Similarity=0.353  Sum_probs=192.6

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEe-cChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhh--
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTA-RDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSN--  104 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~-r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~--  104 (302)
                      +++|+++||||++|||+++|++|+++|++|++.. |+.+++++...++...+.++..+.+|+++.+++..+++++.+.  
T Consensus         2 ~~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (252)
T PRK12747          2 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ   81 (252)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhh
Confidence            4689999999999999999999999999998875 6667777777777766667888999999999999999888753  


Q ss_pred             --CC--CccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCccc
Q 022103          105 --FA--ALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNI  179 (302)
Q Consensus       105 --~g--~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~  179 (302)
                        ++  ++|+||||||.... ++.+.+.++|++++++|+.++++++++++|.|.+   .++||++||..+..+.+     
T Consensus        82 ~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~---~g~iv~isS~~~~~~~~-----  153 (252)
T PRK12747         82 NRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRD---NSRIINISSAATRISLP-----  153 (252)
T ss_pred             hhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhc---CCeEEEECCcccccCCC-----
Confidence              34  89999999997543 4678899999999999999999999999999965   38999999998865432     


Q ss_pred             ccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCC
Q 022103          180 KSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMT  259 (302)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~  259 (302)
                                                           .+.+|++||+++++++++++.|++++||+||+|+||+|+|+|.
T Consensus       154 -------------------------------------~~~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~  196 (252)
T PRK12747        154 -------------------------------------DFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMN  196 (252)
T ss_pred             -------------------------------------CchhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchh
Confidence                                                 2367999999999999999999999999999999999999986


Q ss_pred             CCC-----------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          260 QGQ-----------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       260 ~~~-----------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                      ...                 ....|+++|+.+.+|+. +...+++|..+..++..
T Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s-~~~~~~~G~~i~vdgg~  250 (252)
T PRK12747        197 AELLSDPMMKQYATTISAFNRLGEVEDIADTAAFLAS-PDSRWVTGQLIDVSGGS  250 (252)
T ss_pred             hhcccCHHHHHHHHhcCcccCCCCHHHHHHHHHHHcC-ccccCcCCcEEEecCCc
Confidence            431                 12579999999999986 66778999999998874

>PRK08265 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.6e-35  Score=264.81  Aligned_cols=223  Identities=26%  Similarity=0.309  Sum_probs=194.8

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++   +.++.++.+|+++++++.++++++.+.++
T Consensus         3 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   79 (261)
T PRK08265          3 GLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASL---GERARFIATDITDDAAIERAVATVVARFG   79 (261)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCeeEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            367899999999999999999999999999999999988777776665   34788999999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchh
Q 022103          107 ALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDE  186 (302)
Q Consensus       107 ~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~  186 (302)
                      ++|++|||||.......+.+.++|++.+++|+.+++++++++++.|. + ..++||++||..+..+.+.           
T Consensus        80 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~-~~g~ii~isS~~~~~~~~~-----------  146 (261)
T PRK08265         80 RVDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLA-R-GGGAIVNFTSISAKFAQTG-----------  146 (261)
T ss_pred             CCCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHh-c-CCcEEEEECchhhccCCCC-----------
Confidence            99999999997644334678999999999999999999999999997 3 4689999999887655322           


Q ss_pred             hhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC----
Q 022103          187 ELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ----  262 (302)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~----  262 (302)
                                                     +..|+++|++++.++++++.|+.++||+||+|+||+++|++....    
T Consensus       147 -------------------------------~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~~~~~  195 (261)
T PRK08265        147 -------------------------------RWLYPASKAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDELSGGD  195 (261)
T ss_pred             -------------------------------CchhHHHHHHHHHHHHHHHHHhcccCEEEEEEccCCccChhhhhhcccc
Confidence                                           367999999999999999999999999999999999999975321    


Q ss_pred             ---------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          263 ---------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       263 ---------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                                     ...+|+++|..+.+|+. +...+++|+.+..+|..
T Consensus       196 ~~~~~~~~~~~~p~~r~~~p~dva~~~~~l~s-~~~~~~tG~~i~vdgg~  244 (261)
T PRK08265        196 RAKADRVAAPFHLLGRVGDPEEVAQVVAFLCS-DAASFVTGADYAVDGGY  244 (261)
T ss_pred             hhHHHHhhcccCCCCCccCHHHHHHHHHHHcC-ccccCccCcEEEECCCe
Confidence                           11468999999999987 66788999999998874

>PLN02253 xanthoxin dehydrogenase

Probab=100.00  E-value=5.1e-35  Score=265.91  Aligned_cols=230  Identities=24%  Similarity=0.264  Sum_probs=198.7

Q ss_pred             ccccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHh
Q 022103           24 TKWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKS  103 (302)
Q Consensus        24 ~~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~  103 (302)
                      +...+++|+++||||++|||++++++|+++|++|++++|+.+..++..+++.. +.++.++.+|++|.++++++++.+.+
T Consensus        12 ~~~~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~~~   90 (280)
T PLN02253         12 PSQRLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGG-EPNVCFFHCDVTVEDDVSRAVDFTVD   90 (280)
T ss_pred             cccccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcC-CCceEEEEeecCCHHHHHHHHHHHHH
Confidence            34568899999999999999999999999999999999998777777666643 45788999999999999999999999


Q ss_pred             hCCCccEEEEcCCCCCC---CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccc
Q 022103          104 NFAALDILVNNAGVSFN---DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIK  180 (302)
Q Consensus       104 ~~g~id~lv~~aG~~~~---~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~  180 (302)
                      .++++|+||||||....   .+.+.+.++++.++++|+.+++++++++++.|.++ ..++||+++|..+..+.+.     
T Consensus        91 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~ii~isS~~~~~~~~~-----  164 (280)
T PLN02253         91 KFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPL-KKGSIVSLCSVASAIGGLG-----  164 (280)
T ss_pred             HhCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhc-CCceEEEecChhhcccCCC-----
Confidence            99999999999997532   46788999999999999999999999999999765 4689999999887654322     


Q ss_pred             cccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCC
Q 022103          181 SILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ  260 (302)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~  260 (302)
                                                           +.+|++||++++.++++++.|++++||+|+.|+||.++|++..
T Consensus       165 -------------------------------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~  207 (280)
T PLN02253        165 -------------------------------------PHAYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALAL  207 (280)
T ss_pred             -------------------------------------CcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccccc
Confidence                                                 3579999999999999999999999999999999999998632


Q ss_pred             C--------------------------CCCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          261 G--------------------------QGSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       261 ~--------------------------~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                      .                          .....|+++|..+.+++. +...+++|..+..+|...
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~dva~~~~~l~s-~~~~~i~G~~i~vdgG~~  270 (280)
T PLN02253        208 AHLPEDERTEDALAGFRAFAGKNANLKGVELTVDDVANAVLFLAS-DEARYISGLNLMIDGGFT  270 (280)
T ss_pred             cccccccchhhhhhhhHHHhhcCCCCcCCCCCHHHHHHHHHhhcC-cccccccCcEEEECCchh
Confidence            1                          012579999999999987 677889999999998754

>PRK08643 acetoin reductase; Validated

Probab=100.00  E-value=7.2e-35  Score=261.23  Aligned_cols=227  Identities=30%  Similarity=0.368  Sum_probs=200.2

Q ss_pred             CcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCcc
Q 022103           30 ETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALD  109 (302)
Q Consensus        30 ~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id  109 (302)
                      +|+++||||++|||++++++|+++|++|++++|+.+..++...++.+.+.++.++.+|++++++++++++++.++++++|
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   81 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLN   81 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            68999999999999999999999999999999999888888888876666788999999999999999999999999999


Q ss_pred             EEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhh
Q 022103          110 ILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEEL  188 (302)
Q Consensus       110 ~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  188 (302)
                      ++|||||.... ++.+.+.++++.++++|+.+++.+++.+++.|.+.+..++||++||..+..+.+              
T Consensus        82 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~--------------  147 (256)
T PRK08643         82 VVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGNP--------------  147 (256)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCCC--------------
Confidence            99999997643 567889999999999999999999999999997764458999999988765432              


Q ss_pred             cHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC------
Q 022103          189 SEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ------  262 (302)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~------  262 (302)
                                                  ++..|+++|++++.+++.++.|+.++||+|++|+||+++|++....      
T Consensus       148 ----------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~  199 (256)
T PRK08643        148 ----------------------------ELAVYSSTKFAVRGLTQTAARDLASEGITVNAYAPGIVKTPMMFDIAHQVGE  199 (256)
T ss_pred             ----------------------------CCchhHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcChhhhHHHhhhcc
Confidence                                        2367999999999999999999999999999999999999985421      


Q ss_pred             --------------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcccC
Q 022103          263 --------------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVK  299 (302)
Q Consensus       263 --------------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  299 (302)
                                          ...+++++|..+.+|+. +....++|.++..++...+
T Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~L~~-~~~~~~~G~~i~vdgg~~~  255 (256)
T PRK08643        200 NAGKPDEWGMEQFAKDITLGRLSEPEDVANCVSFLAG-PDSDYITGQTIIVDGGMVF  255 (256)
T ss_pred             ccCCCchHHHHHHhccCCCCCCcCHHHHHHHHHHHhC-ccccCccCcEEEeCCCeec
Confidence                                12568999999999987 6777899999999988654

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=7.1e-35  Score=261.32  Aligned_cols=231  Identities=25%  Similarity=0.363  Sum_probs=202.9

Q ss_pred             ccccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHh
Q 022103           24 TKWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKS  103 (302)
Q Consensus        24 ~~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~  103 (302)
                      ..+++++|+++||||+++||+++|++|+++|++|++++|+.++.+...+.+.+.+.++.++.+|++|+++++++++++.+
T Consensus         4 ~~~~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   83 (255)
T PRK07523          4 NLFDLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEA   83 (255)
T ss_pred             cccCCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            34568899999999999999999999999999999999999888888888876666789999999999999999999999


Q ss_pred             hCCCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccc
Q 022103          104 NFAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSI  182 (302)
Q Consensus       104 ~~g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~  182 (302)
                      .++.+|+||||+|.... ++.+.+.++|++++++|+.+++++++++.+.|.++ +.++||++||..+..+.         
T Consensus        84 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~iss~~~~~~~---------  153 (255)
T PRK07523         84 EIGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIAR-GAGKIINIASVQSALAR---------  153 (255)
T ss_pred             hcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHh-CCeEEEEEccchhccCC---------
Confidence            99999999999997644 56778999999999999999999999999999876 57899999998765332         


Q ss_pred             cchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC
Q 022103          183 LEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ  262 (302)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~  262 (302)
                                                       +++..|+++|++++.++++++.+++++||+|++|+||+++|++....
T Consensus       154 ---------------------------------~~~~~y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~  200 (255)
T PRK07523        154 ---------------------------------PGIAPYTATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAAL  200 (255)
T ss_pred             ---------------------------------CCCccHHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhh
Confidence                                             23478999999999999999999999999999999999999986532


Q ss_pred             -----------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          263 -----------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       263 -----------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                                       ....|+++|..+.+|+. +...+++|..+..++++.
T Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~-~~~~~~~G~~i~~~gg~~  252 (255)
T PRK07523        201 VADPEFSAWLEKRTPAGRWGKVEELVGACVFLAS-DASSFVNGHVLYVDGGIT  252 (255)
T ss_pred             ccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcC-chhcCccCcEEEECCCee
Confidence                             12468999999999987 567789999999988753

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=3.7e-35  Score=264.39  Aligned_cols=221  Identities=21%  Similarity=0.248  Sum_probs=186.2

Q ss_pred             ccCcEEEEeCC--CchHHHHHHHHHHHcCCEEEEEecCh--hhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHh
Q 022103           28 SKETIAIVTGA--NKGIGFALVKRLAELGLTVILTARDV--ERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKS  103 (302)
Q Consensus        28 ~~~k~vlItGa--s~gIG~ala~~l~~~G~~V~l~~r~~--~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~  103 (302)
                      +++|+++|||+  ++|||+++|+.|+++|++|++++|+.  +.+++..+++.   .++.++.+|++|+++++++++++.+
T Consensus         5 ~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~i~~~~~~~~~   81 (256)
T PRK07889          5 LEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLP---EPAPVLELDVTNEEHLASLADRVRE   81 (256)
T ss_pred             ccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcC---CCCcEEeCCCCCHHHHHHHHHHHHH
Confidence            67899999999  89999999999999999999999864  33444444442   3577899999999999999999999


Q ss_pred             hCCCccEEEEcCCCCC-----CCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcc
Q 022103          104 NFAALDILVNNAGVSF-----NDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPN  178 (302)
Q Consensus       104 ~~g~id~lv~~aG~~~-----~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~  178 (302)
                      +++++|++|||||+..     .++.+.+.++|++++++|+.+++++++.++|.|.+   .++||++++... .+      
T Consensus        82 ~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~---~g~Iv~is~~~~-~~------  151 (256)
T PRK07889         82 HVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNE---GGSIVGLDFDAT-VA------  151 (256)
T ss_pred             HcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhccc---CceEEEEeeccc-cc------
Confidence            9999999999999763     24667889999999999999999999999999974   389999986432 11      


Q ss_pred             cccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCC
Q 022103          179 IKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSM  258 (302)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~  258 (302)
                                                          .+.+..|++||+|+++|+++|+.|++++|||||+|+||+++|+|
T Consensus       152 ------------------------------------~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~  195 (256)
T PRK07889        152 ------------------------------------WPAYDWMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLA  195 (256)
T ss_pred             ------------------------------------CCccchhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChh
Confidence                                                12246799999999999999999999999999999999999998


Q ss_pred             CCCC------------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          259 TQGQ------------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       259 ~~~~------------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                      .+..                  ...+|+++|..+++|+. +...+++|+++..++...
T Consensus       196 ~~~~~~~~~~~~~~~~~~p~~~~~~~p~evA~~v~~l~s-~~~~~~tG~~i~vdgg~~  252 (256)
T PRK07889        196 AKAIPGFELLEEGWDERAPLGWDVKDPTPVARAVVALLS-DWFPATTGEIVHVDGGAH  252 (256)
T ss_pred             hhcccCcHHHHHHHHhcCccccccCCHHHHHHHHHHHhC-cccccccceEEEEcCcee
Confidence            5321                  13579999999999987 567789999999988743

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=7.8e-35  Score=261.99  Aligned_cols=223  Identities=20%  Similarity=0.193  Sum_probs=195.4

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCccEE
Q 022103           32 IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDIL  111 (302)
Q Consensus        32 ~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id~l  111 (302)
                      +++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.+ ++.++.+|++|.++++++++++.+.++++|+|
T Consensus         2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~l   80 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYG-EVYAVKADLSDKDDLKNLVKEAWELLGGIDAL   80 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcC-CceEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            69999999999999999999999999999999998888888886544 68899999999999999999999999999999


Q ss_pred             EEcCCCCC--C-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhh
Q 022103          112 VNNAGVSF--N-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEEL  188 (302)
Q Consensus       112 v~~aG~~~--~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  188 (302)
                      |||||...  + .+.+.+.++|.+.+.+|+.+++++++.+++.|.+....++||++||..+..+.+              
T Consensus        81 i~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~~~--------------  146 (259)
T PRK08340         81 VWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEPMP--------------  146 (259)
T ss_pred             EECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCCCC--------------
Confidence            99999753  2 467788999999999999999999999999887543578999999988764322              


Q ss_pred             cHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCC-------
Q 022103          189 SEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG-------  261 (302)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~-------  261 (302)
                                                  .+..|+++|+|+++++++|+.+++++||+|++|+||+++|++.+.       
T Consensus       147 ----------------------------~~~~y~~sKaa~~~~~~~la~e~~~~gI~v~~v~pG~v~t~~~~~~~~~~~~  198 (259)
T PRK08340        147 ----------------------------PLVLADVTRAGLVQLAKGVSRTYGGKGIRAYTVLLGSFDTPGARENLARIAE  198 (259)
T ss_pred             ----------------------------CchHHHHHHHHHHHHHHHHHHHhCCCCEEEEEeccCcccCccHHHHHHhhhh
Confidence                                        246799999999999999999999999999999999999998531       


Q ss_pred             -------------------C-CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          262 -------------------Q-GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       262 -------------------~-~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                                         . +..+|+++|..+.+|++ +...+++|.++..+|...
T Consensus       199 ~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~fL~s-~~~~~itG~~i~vdgg~~  254 (259)
T PRK08340        199 ERGVSFEETWEREVLERTPLKRTGRWEELGSLIAFLLS-ENAEYMLGSTIVFDGAMT  254 (259)
T ss_pred             ccCCchHHHHHHHHhccCCccCCCCHHHHHHHHHHHcC-cccccccCceEeecCCcC
Confidence                               0 12468999999999997 678899999999999854

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=100.00  E-value=1.1e-34  Score=258.65  Aligned_cols=227  Identities=26%  Similarity=0.321  Sum_probs=195.6

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.  .++..+.+.+.+.++.++.+|+++.+++..+++++.+.++
T Consensus         2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (248)
T TIGR01832         2 SLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSE--PSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFG   79 (248)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCch--HHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            47899999999999999999999999999999999975  3444555555566789999999999999999999999889


Q ss_pred             CccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccch
Q 022103          107 ALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILED  185 (302)
Q Consensus       107 ~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~  185 (302)
                      ++|++|||||.... ++.+.+.++|++++++|+.+++.+++++++.|.+++..++||++||..+..+.+           
T Consensus        80 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~-----------  148 (248)
T TIGR01832        80 HIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGI-----------  148 (248)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCCC-----------
Confidence            99999999998654 466788999999999999999999999999997763368999999987764422           


Q ss_pred             hhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC---
Q 022103          186 EELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ---  262 (302)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~---  262 (302)
                                                     ....|+++|++++.++++++.++.++||+|++|+||+++|++....   
T Consensus       149 -------------------------------~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~  197 (248)
T TIGR01832       149 -------------------------------RVPSYTASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQALRAD  197 (248)
T ss_pred             -------------------------------CCchhHHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhccccC
Confidence                                           1357999999999999999999999999999999999999985421   


Q ss_pred             --------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          263 --------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       263 --------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                                    ...+|+++|..+++|+. +...+++|.++..++.+.
T Consensus       198 ~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s-~~~~~~~G~~i~~dgg~~  246 (248)
T TIGR01832       198 EDRNAAILERIPAGRWGTPDDIGGPAVFLAS-SASDYVNGYTLAVDGGWL  246 (248)
T ss_pred             hHHHHHHHhcCCCCCCcCHHHHHHHHHHHcC-ccccCcCCcEEEeCCCEe
Confidence                          23579999999999987 567789999999998754

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK08862 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.9e-35  Score=260.08  Aligned_cols=219  Identities=20%  Similarity=0.133  Sum_probs=186.8

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.+.++..+.+|+++.++++++++++.+.++
T Consensus         2 ~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   81 (227)
T PRK08862          2 DIKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFN   81 (227)
T ss_pred             CCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            57899999999999999999999999999999999999999999888877777788999999999999999999999998


Q ss_pred             -CccEEEEcCCCCC-C-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCccccccc
Q 022103          107 -ALDILVNNAGVSF-N-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSIL  183 (302)
Q Consensus       107 -~id~lv~~aG~~~-~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~  183 (302)
                       ++|++|||||... . .+.+.+.+++.+.+++|+.+++.+++.++|+|.++++.|+||++||..+.             
T Consensus        82 ~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~-------------  148 (227)
T PRK08862         82 RAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDH-------------  148 (227)
T ss_pred             CCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCC-------------
Confidence             9999999998542 2 57788999999999999999999999999999876456899999996543             


Q ss_pred             chhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCC-C
Q 022103          184 EDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG-Q  262 (302)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~-~  262 (302)
                                                      +++..|+++|+|+++|+++|+.|++++|||||+|+||+++|+.... .
T Consensus       149 --------------------------------~~~~~Y~asKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~~~~~~~  196 (227)
T PRK08862        149 --------------------------------QDLTGVESSNALVSGFTHSWAKELTPFNIRVGGVVPSIFSANGELDAV  196 (227)
T ss_pred             --------------------------------CCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCCCccCHH
Confidence                                            1136799999999999999999999999999999999999984221 0


Q ss_pred             CCCC-HHHHHHHHHHHhhcCCCCCCCcceeec
Q 022103          263 GSHT-ADEAADVGARLLLLHPQQLPTAKFYIG  293 (302)
Q Consensus       263 ~~~~-~~~~a~~~~~l~~~~~~~~~~G~~~~~  293 (302)
                      .... .++++....+|+.   ..+++|..+..
T Consensus       197 ~~~~~~~~~~~~~~~l~~---~~~~tg~~~~~  225 (227)
T PRK08862        197 HWAEIQDELIRNTEYIVA---NEYFSGRVVEA  225 (227)
T ss_pred             HHHHHHHHHHhheeEEEe---cccccceEEee
Confidence            0111 2677777777774   44788877653

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=2.2e-34  Score=259.88  Aligned_cols=231  Identities=24%  Similarity=0.363  Sum_probs=203.5

Q ss_pred             cccccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHH
Q 022103           23 STKWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFK  102 (302)
Q Consensus        23 ~~~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~  102 (302)
                      +..+.+++|+++|||+++|||++++++|+++|++|++++|+.+++++..+.+...+.++.++.+|++++++++++++++.
T Consensus         3 ~~~~~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   82 (265)
T PRK07097          3 ENLFSLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIE   82 (265)
T ss_pred             ccccCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHH
Confidence            34567899999999999999999999999999999999999998888888887767789999999999999999999999


Q ss_pred             hhCCCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCccccc
Q 022103          103 SNFAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKS  181 (302)
Q Consensus       103 ~~~g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~  181 (302)
                      +.++++|+||||||.... ++.+.+.+++++++++|+.+++.+++.+++.|.++ +.++||++||..+..+..       
T Consensus        83 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~~~~-------  154 (265)
T PRK07097         83 KEVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKK-GHGKIINICSMMSELGRE-------  154 (265)
T ss_pred             HhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc-CCcEEEEEcCccccCCCC-------
Confidence            999999999999998654 56788999999999999999999999999999876 579999999987765432       


Q ss_pred             ccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCC
Q 022103          182 ILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG  261 (302)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~  261 (302)
                                                         .+..|+++|++++.++++++.++.++||+|++|+||.++|++...
T Consensus       155 -----------------------------------~~~~Y~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  199 (265)
T PRK07097        155 -----------------------------------TVSAYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAP  199 (265)
T ss_pred             -----------------------------------CCccHHHHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccchhh
Confidence                                               236799999999999999999999999999999999999997532


Q ss_pred             C-----------------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          262 Q-----------------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       262 ~-----------------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                      .                       ...+|+++|..+.+++. +....++|+++..++..
T Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~-~~~~~~~g~~~~~~gg~  257 (265)
T PRK07097        200 LRELQADGSRHPFDQFIIAKTPAARWGDPEDLAGPAVFLAS-DASNFVNGHILYVDGGI  257 (265)
T ss_pred             hhhccccccchhHHHHHHhcCCccCCcCHHHHHHHHHHHhC-cccCCCCCCEEEECCCc
Confidence            1                       12468999999999987 45667999999988874

>PRK06128 oxidoreductase; Provisional

Probab=100.00  E-value=1.5e-34  Score=266.20  Aligned_cols=226  Identities=26%  Similarity=0.287  Sum_probs=195.9

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChh--hHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhh
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVE--RGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSN  104 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~--~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~  104 (302)
                      .+++|++|||||++|||+++|+.|+++|++|+++.++.+  ..++..+.+...+.++.++.+|+++.++++++++++.+.
T Consensus        52 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  131 (300)
T PRK06128         52 RLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKE  131 (300)
T ss_pred             ccCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHH
Confidence            377899999999999999999999999999999887643  455666677766778889999999999999999999999


Q ss_pred             CCCccEEEEcCCCCC--CCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccc
Q 022103          105 FAALDILVNNAGVSF--NDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSI  182 (302)
Q Consensus       105 ~g~id~lv~~aG~~~--~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~  182 (302)
                      ++++|+||||||...  .++.+.+.++|++++++|++++++++++++|.|.+   .++||++||..+..+.+        
T Consensus       132 ~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~~~iv~~sS~~~~~~~~--------  200 (300)
T PRK06128        132 LGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPP---GASIINTGSIQSYQPSP--------  200 (300)
T ss_pred             hCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCc---CCEEEEECCccccCCCC--------
Confidence            999999999999753  35778899999999999999999999999999864   37999999988765432        


Q ss_pred             cchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC
Q 022103          183 LEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ  262 (302)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~  262 (302)
                                                        .+..|++||++++.|+++|+.++.++||+||+|+||+++|+|....
T Consensus       201 ----------------------------------~~~~Y~asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~  246 (300)
T PRK06128        201 ----------------------------------TLLDYASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSG  246 (300)
T ss_pred             ----------------------------------CchhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccC
Confidence                                              2367999999999999999999999999999999999999986421


Q ss_pred             -----------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          263 -----------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       263 -----------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                                       ....|+++|..+.+|+. +...+++|+++..++...
T Consensus       247 ~~~~~~~~~~~~~~p~~r~~~p~dva~~~~~l~s-~~~~~~~G~~~~v~gg~~  298 (300)
T PRK06128        247 GQPPEKIPDFGSETPMKRPGQPVEMAPLYVLLAS-QESSYVTGEVFGVTGGLL  298 (300)
T ss_pred             CCCHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhC-ccccCccCcEEeeCCCEe
Confidence                             11578999999999987 567789999999998864

>PRK07831 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.2e-34  Score=258.22  Aligned_cols=228  Identities=23%  Similarity=0.222  Sum_probs=198.7

Q ss_pred             cccCcEEEEeCCCc-hHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhh-CC-CceeEEEeeCCCHHHHHHHHHHHHh
Q 022103           27 WSKETIAIVTGANK-GIGFALVKRLAELGLTVILTARDVERGQRAVESLSE-KG-LPVNFFQLDVSDPSSIEAFVSWFKS  103 (302)
Q Consensus        27 ~~~~k~vlItGas~-gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~-~~-~~~~~~~~Dlt~~~~~~~~~~~~~~  103 (302)
                      .+++|+++||||+| |||+++++.|+++|++|++++|+.+++++..+++.+ .+ .++.++.+|++++++++++++++.+
T Consensus        14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   93 (262)
T PRK07831         14 LLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVE   93 (262)
T ss_pred             ccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            35689999999985 999999999999999999999999888888877765 23 3688899999999999999999999


Q ss_pred             hCCCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccc
Q 022103          104 NFAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSI  182 (302)
Q Consensus       104 ~~g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~  182 (302)
                      .++++|+||||||.... .+.+.+.++|++.+++|+.+++.++++++|.|.+....++||+++|..+..+.         
T Consensus        94 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~~---------  164 (262)
T PRK07831         94 RLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRAQ---------  164 (262)
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCC---------
Confidence            99999999999997543 56788999999999999999999999999999876336899999998775432         


Q ss_pred             cchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC
Q 022103          183 LEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ  262 (302)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~  262 (302)
                                                       +++..|+++|+|+++++++++.|++++||+|+.|+||+++|++....
T Consensus       165 ---------------------------------~~~~~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~  211 (262)
T PRK07831        165 ---------------------------------HGQAHYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKV  211 (262)
T ss_pred             ---------------------------------CCCcchHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCcccccc
Confidence                                             22467999999999999999999999999999999999999986432


Q ss_pred             ----------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          263 ----------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       263 ----------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                                      +..+|+++|..+++|+. +...+++|+++..+.++
T Consensus       212 ~~~~~~~~~~~~~~~~r~~~p~~va~~~~~l~s-~~~~~itG~~i~v~~~~  261 (262)
T PRK07831        212 TSAELLDELAAREAFGRAAEPWEVANVIAFLAS-DYSSYLTGEVVSVSSQH  261 (262)
T ss_pred             cCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcC-chhcCcCCceEEeCCCC
Confidence                            12579999999999987 66788999999988865

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=100.00  E-value=3.7e-34  Score=256.85  Aligned_cols=228  Identities=20%  Similarity=0.233  Sum_probs=200.6

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      +.+++|+++||||++|||++++++|+++|++|++++|+.+..+...+++...+.++.++.+|+++.+++.++++.+.+.+
T Consensus         7 ~~l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   86 (255)
T PRK06113          7 LRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKL   86 (255)
T ss_pred             cCcCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            45789999999999999999999999999999999999988888888887767788899999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccch
Q 022103          106 AALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILED  185 (302)
Q Consensus       106 g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~  185 (302)
                      +++|++|||||.......+.+.++++..+++|+.++++++++++|+|.+. +.++||++||..+..+..           
T Consensus        87 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~isS~~~~~~~~-----------  154 (255)
T PRK06113         87 GKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKN-GGGVILTITSMAAENKNI-----------  154 (255)
T ss_pred             CCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhc-CCcEEEEEecccccCCCC-----------
Confidence            99999999999765433467889999999999999999999999999765 468999999988764432           


Q ss_pred             hhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC---
Q 022103          186 EELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ---  262 (302)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~---  262 (302)
                                                     ++.+|+++|+|+++++++++.++.++||+||+|+||+++|++....   
T Consensus       155 -------------------------------~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~~~~~  203 (255)
T PRK06113        155 -------------------------------NMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITP  203 (255)
T ss_pred             -------------------------------CcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecccccccccccccCH
Confidence                                           2367999999999999999999999999999999999999986532   


Q ss_pred             -------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          263 -------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       263 -------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                                   ...+|++++..+.+|+. +...+++|+++..++.-
T Consensus       204 ~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~-~~~~~~~G~~i~~~gg~  250 (255)
T PRK06113        204 EIEQKMLQHTPIRRLGQPQDIANAALFLCS-PAASWVSGQILTVSGGG  250 (255)
T ss_pred             HHHHHHHhcCCCCCCcCHHHHHHHHHHHcC-ccccCccCCEEEECCCc
Confidence                         12588999999999986 67888999999998874

>PRK09242 tropinone reductase; Provisional

Probab=100.00  E-value=2.7e-34  Score=257.80  Aligned_cols=231  Identities=29%  Similarity=0.410  Sum_probs=201.8

Q ss_pred             ccccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhC--CCceeEEEeeCCCHHHHHHHHHHH
Q 022103           24 TKWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEK--GLPVNFFQLDVSDPSSIEAFVSWF  101 (302)
Q Consensus        24 ~~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dlt~~~~~~~~~~~~  101 (302)
                      +.|.+++|+++||||++|||+++++.|+++|++|++++|+.+++++..+++...  +.++.++.+|+++++++.++++++
T Consensus         3 ~~~~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   82 (257)
T PRK09242          3 HRWRLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWV   82 (257)
T ss_pred             cccccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHH
Confidence            346788999999999999999999999999999999999998888888777654  457889999999999999999999


Q ss_pred             HhhCCCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccc
Q 022103          102 KSNFAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIK  180 (302)
Q Consensus       102 ~~~~g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~  180 (302)
                      .+.++++|+||||+|.... ++.+.+.++++..+.+|+.++++++++++|+|.++ ..++||++||..+..+..      
T Consensus        83 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~ii~~sS~~~~~~~~------  155 (257)
T PRK09242         83 EDHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQH-ASSAIVNIGSVSGLTHVR------  155 (257)
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-CCceEEEECccccCCCCC------
Confidence            9999999999999997543 46678999999999999999999999999999876 468999999988765432      


Q ss_pred             cccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCC
Q 022103          181 SILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ  260 (302)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~  260 (302)
                                                          .+..|+++|++++.++++++.|+.+.||+|++|+||+++|++..
T Consensus       156 ------------------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~  199 (257)
T PRK09242        156 ------------------------------------SGAPYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTS  199 (257)
T ss_pred             ------------------------------------CCcchHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcccc
Confidence                                                23679999999999999999999989999999999999999865


Q ss_pred             CCC-----------------CCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          261 GQG-----------------SHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       261 ~~~-----------------~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                      ...                 ..++++++..+.+|+. +...+++|.++..++...
T Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~-~~~~~~~g~~i~~~gg~~  253 (257)
T PRK09242        200 GPLSDPDYYEQVIERTPMRRVGEPEEVAAAVAFLCM-PAASYITGQCIAVDGGFL  253 (257)
T ss_pred             cccCChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC-cccccccCCEEEECCCeE
Confidence            321                 1478999999999987 556678999999887643

>PRK06139 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.4e-34  Score=268.60  Aligned_cols=217  Identities=25%  Similarity=0.297  Sum_probs=192.0

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      ..+++|+++||||++|||+++|+.|+++|++|++++|+.+++++..+++.+.+.++.++.+|++|.++++++++++.+.+
T Consensus         3 ~~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~   82 (330)
T PRK06139          3 GPLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFG   82 (330)
T ss_pred             cCCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhc
Confidence            34778999999999999999999999999999999999999999999998877788899999999999999999999989


Q ss_pred             CCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccc
Q 022103          106 AALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILE  184 (302)
Q Consensus       106 g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~  184 (302)
                      +.+|++|||||.... ++.+.+.+++++++++|+.+++++++.++|+|.++ ..++||+++|..+..+.+          
T Consensus        83 g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~-~~g~iV~isS~~~~~~~p----------  151 (330)
T PRK06139         83 GRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQ-GHGIFINMISLGGFAAQP----------  151 (330)
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHc-CCCEEEEEcChhhcCCCC----------
Confidence            999999999997644 57888999999999999999999999999999887 568999999988765432          


Q ss_pred             hhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCC-CcEEEEeecCcccCCCCCCC-
Q 022103          185 DEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGE-GISVNSYCPGFTQTSMTQGQ-  262 (302)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~-gI~V~~v~PG~v~T~~~~~~-  262 (302)
                                                      ++..|++||+++.+|+++|+.|+.+. ||+|++|+||+++|++.... 
T Consensus       152 --------------------------------~~~~Y~asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~~  199 (330)
T PRK06139        152 --------------------------------YAAAYSASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHGA  199 (330)
T ss_pred             --------------------------------CchhHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCccccccc
Confidence                                            34789999999999999999999774 99999999999999986431 


Q ss_pred             -----------CCCCHHHHHHHHHHHhhcCCCCC
Q 022103          263 -----------GSHTADEAADVGARLLLLHPQQL  285 (302)
Q Consensus       263 -----------~~~~~~~~a~~~~~l~~~~~~~~  285 (302)
                                 ...+|+++|..+++++..+..++
T Consensus       200 ~~~~~~~~~~~~~~~pe~vA~~il~~~~~~~~~~  233 (330)
T PRK06139        200 NYTGRRLTPPPPVYDPRRVAKAVVRLADRPRATT  233 (330)
T ss_pred             ccccccccCCCCCCCHHHHHHHHHHHHhCCCCEE
Confidence                       12579999999999987554433

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=3.4e-34  Score=257.71  Aligned_cols=227  Identities=27%  Similarity=0.293  Sum_probs=195.2

Q ss_pred             cccCcEEEEeCCC--chHHHHHHHHHHHcCCEEEEEecC-----------hhhHHHHHHHHhhCCCceeEEEeeCCCHHH
Q 022103           27 WSKETIAIVTGAN--KGIGFALVKRLAELGLTVILTARD-----------VERGQRAVESLSEKGLPVNFFQLDVSDPSS   93 (302)
Q Consensus        27 ~~~~k~vlItGas--~gIG~ala~~l~~~G~~V~l~~r~-----------~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~   93 (302)
                      .+++|+++||||+  +|||+++|++|+++|++|++++|+           .+++....+++.+.+.++.++.+|+++.++
T Consensus         3 ~l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~   82 (256)
T PRK12859          3 QLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDA   82 (256)
T ss_pred             CcCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHH
Confidence            4789999999998  599999999999999999987542           233445556666667788999999999999


Q ss_pred             HHHHHHHHHhhCCCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccc
Q 022103           94 IEAFVSWFKSNFAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLS  172 (302)
Q Consensus        94 ~~~~~~~~~~~~g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~  172 (302)
                      ++++++++.+.++++|++|||||.... ++.+.+.++|++.+++|+.+++.+.++++|.|.++ ..++||++||..+..+
T Consensus        83 i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~~  161 (256)
T PRK12859         83 PKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKK-SGGRIINMTSGQFQGP  161 (256)
T ss_pred             HHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc-CCeEEEEEcccccCCC
Confidence            999999999999999999999997643 57889999999999999999999999999999876 4689999999887543


Q ss_pred             cccCcccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecC
Q 022103          173 KVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPG  252 (302)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG  252 (302)
                      .                                          +++.+|+++|+++++|+++++.++.++||+|++|+||
T Consensus       162 ~------------------------------------------~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG  199 (256)
T PRK12859        162 M------------------------------------------VGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPG  199 (256)
T ss_pred             C------------------------------------------CCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEc
Confidence            2                                          2357899999999999999999999999999999999


Q ss_pred             cccCCCCCCC------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          253 FTQTSMTQGQ------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       253 ~v~T~~~~~~------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                      +++|++....            ...+|+++|..+.+++. +...+++|.++.+++.+
T Consensus       200 ~i~t~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s-~~~~~~~G~~i~~dgg~  255 (256)
T PRK12859        200 PTDTGWMTEEIKQGLLPMFPFGRIGEPKDAARLIKFLAS-EEAEWITGQIIHSEGGF  255 (256)
T ss_pred             cccCCCCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC-ccccCccCcEEEeCCCc
Confidence            9999864321            12579999999999986 56778999999999874

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=100.00  E-value=5e-34  Score=256.32  Aligned_cols=224  Identities=24%  Similarity=0.227  Sum_probs=192.3

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      .+++|+++||||++|||++++++|+++|++|++++|+. ..+...+++...+.++.++.+|+++.+++.++++++.+.++
T Consensus         5 ~~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   83 (260)
T PRK12823          5 RFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSE-LVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFG   83 (260)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCch-HHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcC
Confidence            47889999999999999999999999999999999985 34556666766666788999999999999999999999999


Q ss_pred             CccEEEEcCCCC--CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccc
Q 022103          107 ALDILVNNAGVS--FNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILE  184 (302)
Q Consensus       107 ~id~lv~~aG~~--~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~  184 (302)
                      .+|+||||||..  ..++.+.+.++++..+++|+.+++++++.++|.|.++ +.++||++||..+...            
T Consensus        84 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~~sS~~~~~~------------  150 (260)
T PRK12823         84 RIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQ-GGGAIVNVSSIATRGI------------  150 (260)
T ss_pred             CCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCeEEEEcCccccCC------------
Confidence            999999999964  2357788999999999999999999999999999876 4689999999765311            


Q ss_pred             hhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCC---
Q 022103          185 DEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG---  261 (302)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~---  261 (302)
                                                      ...+|++||++++.|+++++.|+.++||+|++|+||+|+|++...   
T Consensus       151 --------------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~  198 (260)
T PRK12823        151 --------------------------------NRVPYSAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRN  198 (260)
T ss_pred             --------------------------------CCCccHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHh
Confidence                                            125799999999999999999999999999999999999986210   


Q ss_pred             -------------------------CCCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          262 -------------------------QGSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       262 -------------------------~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                                               .....|+++|+.+++|+. +...+++|..+..++..
T Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s-~~~~~~~g~~~~v~gg~  258 (260)
T PRK12823        199 AAPQSEQEKAWYQQIVDQTLDSSLMKRYGTIDEQVAAILFLAS-DEASYITGTVLPVGGGD  258 (260)
T ss_pred             hccccccccccHHHHHHHHhccCCcccCCCHHHHHHHHHHHcC-cccccccCcEEeecCCC
Confidence                                     012468999999999986 56677999999988764

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.5e-34  Score=258.00  Aligned_cols=225  Identities=27%  Similarity=0.341  Sum_probs=190.2

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      .+++|+++||||++|||+++|++|+++|++|+++.|+.++..   +++.+.  .+.++.+|++|+++++++++++.+.++
T Consensus         4 ~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~---~~l~~~--~~~~~~~Dl~~~~~~~~~~~~~~~~~~   78 (255)
T PRK06463          4 RFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEA---KELREK--GVFTIKCDVGNRDQVKKSKEVVEKEFG   78 (255)
T ss_pred             CcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHH---HHHHhC--CCeEEEecCCCHHHHHHHHHHHHHHcC
Confidence            467899999999999999999999999999998877654332   233322  478899999999999999999999999


Q ss_pred             CccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccch
Q 022103          107 ALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILED  185 (302)
Q Consensus       107 ~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~  185 (302)
                      ++|+||||||.... ++.+.+.++|+.++++|+.+++++++.++|.|.++ +.++||++||..+..+.            
T Consensus        79 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~-~~g~iv~isS~~~~~~~------------  145 (255)
T PRK06463         79 RVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLS-KNGAIVNIASNAGIGTA------------  145 (255)
T ss_pred             CCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhc-CCcEEEEEcCHHhCCCC------------
Confidence            99999999998643 56778999999999999999999999999999866 56899999998765221            


Q ss_pred             hhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC---
Q 022103          186 EELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ---  262 (302)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~---  262 (302)
                                                   ++++..|++||+|+++++++++.|+.++||+|+.|+||+++|++....   
T Consensus       146 -----------------------------~~~~~~Y~asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~  196 (255)
T PRK06463        146 -----------------------------AEGTTFYAITKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKSQ  196 (255)
T ss_pred             -----------------------------CCCccHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhcccCc
Confidence                                         122467999999999999999999999999999999999999986321   


Q ss_pred             -----------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcccC
Q 022103          263 -----------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVK  299 (302)
Q Consensus       263 -----------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  299 (302)
                                       ...+|+++|..+++|+. +...+++|.++..++....
T Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s-~~~~~~~G~~~~~dgg~~~  249 (255)
T PRK06463        197 EEAEKLRELFRNKTVLKTTGKPEDIANIVLFLAS-DDARYITGQVIVADGGRID  249 (255)
T ss_pred             cchHHHHHHHHhCCCcCCCcCHHHHHHHHHHHcC-hhhcCCCCCEEEECCCeee
Confidence                             12479999999999987 5667899999999987543

>PRK06398 aldose dehydrogenase; Validated

Probab=100.00  E-value=1.8e-34  Score=259.93  Aligned_cols=216  Identities=28%  Similarity=0.321  Sum_probs=188.7

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      ++++|+++||||++|||+++|++|+++|++|++++|+..+.           .++.++.+|++|+++++++++++.++++
T Consensus         3 ~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~-----------~~~~~~~~D~~~~~~i~~~~~~~~~~~~   71 (258)
T PRK06398          3 GLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSY-----------NDVDYFKVDVSNKEQVIKGIDYVISKYG   71 (258)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcccc-----------CceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            47899999999999999999999999999999999986431           2578899999999999999999999999


Q ss_pred             CccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccch
Q 022103          107 ALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILED  185 (302)
Q Consensus       107 ~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~  185 (302)
                      ++|+||||||.... ++.+.+.++|++++++|+.++++++++++|.|.++ ..++||++||..+..+.            
T Consensus        72 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~~~------------  138 (258)
T PRK06398         72 RIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQ-DKGVIINIASVQSFAVT------------  138 (258)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCeEEEEeCcchhccCC------------
Confidence            99999999998643 57788999999999999999999999999999876 56899999998876442            


Q ss_pred             hhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC---
Q 022103          186 EELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ---  262 (302)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~---  262 (302)
                                                    +++.+|++||++++.++++++.|+++. |+||+|+||+++|+|....   
T Consensus       139 ------------------------------~~~~~Y~~sKaal~~~~~~la~e~~~~-i~vn~i~PG~v~T~~~~~~~~~  187 (258)
T PRK06398        139 ------------------------------RNAAAYVTSKHAVLGLTRSIAVDYAPT-IRCVAVCPGSIRTPLLEWAAEL  187 (258)
T ss_pred             ------------------------------CCCchhhhhHHHHHHHHHHHHHHhCCC-CEEEEEecCCccchHHhhhhhc
Confidence                                          234789999999999999999999875 9999999999999975321   


Q ss_pred             -----------------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          263 -----------------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       263 -----------------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                                             ....|+++|..+++|+. +...+++|.++..++...
T Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~eva~~~~~l~s-~~~~~~~G~~i~~dgg~~  245 (258)
T PRK06398        188 EVGKDPEHVERKIREWGEMHPMKRVGKPEEVAYVVAFLAS-DLASFITGECVTVDGGLR  245 (258)
T ss_pred             cccCChhhhHHHHHhhhhcCCcCCCcCHHHHHHHHHHHcC-cccCCCCCcEEEECCccc
Confidence                                   11479999999999987 667789999999988854

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=6e-34  Score=255.29  Aligned_cols=231  Identities=22%  Similarity=0.321  Sum_probs=204.5

Q ss_pred             cccccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHH
Q 022103           23 STKWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFK  102 (302)
Q Consensus        23 ~~~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~  102 (302)
                      +.+..+++|+++||||+++||++++++|+++|++|++++|+.+.+++..+++.+.+.++.++.+|+++++++.++++++.
T Consensus         4 ~~~~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   83 (256)
T PRK06124          4 LQRFSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARID   83 (256)
T ss_pred             ccccCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHH
Confidence            34667899999999999999999999999999999999999988888888887777788999999999999999999999


Q ss_pred             hhCCCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCccccc
Q 022103          103 SNFAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKS  181 (302)
Q Consensus       103 ~~~g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~  181 (302)
                      ..++++|++|||+|.... ++.+.+.++|++.+++|+.+++.+++.+++.|.++ ..++||++||..+..+.+       
T Consensus        84 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~~ss~~~~~~~~-------  155 (256)
T PRK06124         84 AEHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQ-GYGRIIAITSIAGQVARA-------  155 (256)
T ss_pred             HhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEEeechhccCCC-------
Confidence            999999999999997654 56778899999999999999999999999999876 578999999988765432       


Q ss_pred             ccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCC
Q 022103          182 ILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG  261 (302)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~  261 (302)
                                                         ++.+|+++|++++.+++.++.|+.++||+|++|+||+++|++.+.
T Consensus       156 -----------------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~  200 (256)
T PRK06124        156 -----------------------------------GDAVYPAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAA  200 (256)
T ss_pred             -----------------------------------CccHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhh
Confidence                                               247899999999999999999998889999999999999998543


Q ss_pred             C-----------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          262 Q-----------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       262 ~-----------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                      .                 ....+++++..+++|+. +...+++|.++..++..
T Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~-~~~~~~~G~~i~~dgg~  252 (256)
T PRK06124        201 MAADPAVGPWLAQRTPLGRWGRPEEIAGAAVFLAS-PAASYVNGHVLAVDGGY  252 (256)
T ss_pred             hccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcC-cccCCcCCCEEEECCCc
Confidence            2                 12569999999999987 56678999999998864

>PRK05876 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5e-34  Score=259.76  Aligned_cols=211  Identities=23%  Similarity=0.315  Sum_probs=187.9

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      .+++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++...+.++.++.+|++|++++.++++++.+.++
T Consensus         3 ~~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   82 (275)
T PRK05876          3 GFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLG   82 (275)
T ss_pred             CcCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            37899999999999999999999999999999999999988888888876677788999999999999999999999999


Q ss_pred             CccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccch
Q 022103          107 ALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILED  185 (302)
Q Consensus       107 ~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~  185 (302)
                      ++|+||||||.... ++.+.+.++|+.++++|+.+++++++.++|.|.++...++||++||..+..+.+           
T Consensus        83 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~~~-----------  151 (275)
T PRK05876         83 HVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPNA-----------  151 (275)
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccCCC-----------
Confidence            99999999998644 577889999999999999999999999999998764468999999998875532           


Q ss_pred             hhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC---
Q 022103          186 EELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ---  262 (302)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~---  262 (302)
                                                     ++..|++||+++++|+++|+.|+.++||+|++|+||+++|++..+.   
T Consensus       152 -------------------------------~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~  200 (275)
T PRK05876        152 -------------------------------GLGAYGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVANSERI  200 (275)
T ss_pred             -------------------------------CCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCccccccccchhhh
Confidence                                           2367999999999999999999988999999999999999986431   


Q ss_pred             ---------------------CCCCHHHHHHHHHHHhh
Q 022103          263 ---------------------GSHTADEAADVGARLLL  279 (302)
Q Consensus       263 ---------------------~~~~~~~~a~~~~~l~~  279 (302)
                                           ...+|+++|..++..+.
T Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ai~  238 (275)
T PRK05876        201 RGAACAQSSTTGSPGPLPLQDDNLGVDDIAQLTADAIL  238 (275)
T ss_pred             cCccccccccccccccccccccCCCHHHHHHHHHHHHH
Confidence                                 12679999999988875

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=5.7e-34  Score=263.28  Aligned_cols=231  Identities=25%  Similarity=0.337  Sum_probs=197.3

Q ss_pred             cccccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecC-hhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHH
Q 022103           23 STKWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARD-VERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWF  101 (302)
Q Consensus        23 ~~~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~-~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~  101 (302)
                      .+..++++|+++||||++|||+++|++|+++|++|++++++ .+..++..+++...+.++.++.+|++|.+++.++++++
T Consensus         5 ~~~~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~   84 (306)
T PRK07792          5 TNTTDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATA   84 (306)
T ss_pred             cCCcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHH
Confidence            34466889999999999999999999999999999999885 45667778888777778899999999999999999999


Q ss_pred             HhhCCCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCC------CCCcEEEecCCCcccccc
Q 022103          102 KSNFAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSP------SKSRILNISSRLGTLSKV  174 (302)
Q Consensus       102 ~~~~g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~------~~~~iv~vsS~~~~~~~~  174 (302)
                      .+ +|++|+||||||.... .+.+.+.++|+.++++|+.+++++++++.++|.++.      ..|+||++||..+..+.+
T Consensus        85 ~~-~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  163 (306)
T PRK07792         85 VG-LGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGPV  163 (306)
T ss_pred             HH-hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccCCC
Confidence            98 9999999999998754 467789999999999999999999999999987531      247999999988765432


Q ss_pred             cCcccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcc
Q 022103          175 RNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFT  254 (302)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v  254 (302)
                                                                ++..|+++|+++++|+++++.|+.++||+||+|+||. 
T Consensus       164 ------------------------------------------~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg~-  200 (306)
T PRK07792        164 ------------------------------------------GQANYGAAKAGITALTLSAARALGRYGVRANAICPRA-  200 (306)
T ss_pred             ------------------------------------------CCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCCC-
Confidence                                                      2367999999999999999999999999999999994 


Q ss_pred             cCCCCCCC------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          255 QTSMTQGQ------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       255 ~T~~~~~~------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                      .|+|....            ...+|++++..+.+|+. +....++|.+|..+|+.+
T Consensus       201 ~t~~~~~~~~~~~~~~~~~~~~~~pe~va~~v~~L~s-~~~~~~tG~~~~v~gg~~  255 (306)
T PRK07792        201 RTAMTADVFGDAPDVEAGGIDPLSPEHVVPLVQFLAS-PAAAEVNGQVFIVYGPMV  255 (306)
T ss_pred             CCchhhhhccccchhhhhccCCCCHHHHHHHHHHHcC-ccccCCCCCEEEEcCCeE
Confidence            78775321            12468999999999986 556679999999988743

>PRK07677 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.9e-34  Score=254.28  Aligned_cols=226  Identities=24%  Similarity=0.254  Sum_probs=194.3

Q ss_pred             CcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCcc
Q 022103           30 ETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALD  109 (302)
Q Consensus        30 ~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id  109 (302)
                      +|+++||||++|||+++++.|+++|++|++++|+.+++++..+.+.+.+.++.++.+|++|+++++++++++.+.++++|
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRID   80 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence            58999999999999999999999999999999999888888877776666889999999999999999999999999999


Q ss_pred             EEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhh
Q 022103          110 ILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEEL  188 (302)
Q Consensus       110 ~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  188 (302)
                      +||||+|.... ++.+.+.++|+.++++|+.+++++++++++.|.+....++||++||..+..+..              
T Consensus        81 ~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~--------------  146 (252)
T PRK07677         81 ALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAGP--------------  146 (252)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCCC--------------
Confidence            99999997543 567889999999999999999999999999987653468999999988764322              


Q ss_pred             cHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccC-CCcEEEEeecCcccCC-CCCC-----
Q 022103          189 SEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEG-EGISVNSYCPGFTQTS-MTQG-----  261 (302)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~-~gI~V~~v~PG~v~T~-~~~~-----  261 (302)
                                                  .+.+|++||+|++.|+++|+.|+.+ +||+|+.|+||+++|. +...     
T Consensus       147 ----------------------------~~~~Y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~~~~~~  198 (252)
T PRK07677        147 ----------------------------GVIHSAAAKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWESE  198 (252)
T ss_pred             ----------------------------CCcchHHHHHHHHHHHHHHHHHhCcccCeEEEEEeecccccccccccccCCH
Confidence                                        2367999999999999999999964 6999999999999853 2211     


Q ss_pred             ------------CCCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          262 ------------QGSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       262 ------------~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                                  ....+|++++..+.+|+. +...+++|.++..+++.+
T Consensus       199 ~~~~~~~~~~~~~~~~~~~~va~~~~~l~~-~~~~~~~g~~~~~~gg~~  246 (252)
T PRK07677        199 EAAKRTIQSVPLGRLGTPEEIAGLAYFLLS-DEAAYINGTCITMDGGQW  246 (252)
T ss_pred             HHHHHHhccCCCCCCCCHHHHHHHHHHHcC-ccccccCCCEEEECCCee
Confidence                        023579999999999987 556789999999888754

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-33  Score=254.22  Aligned_cols=229  Identities=24%  Similarity=0.304  Sum_probs=198.0

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecCh-hhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDV-ERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~-~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      .+++|+++||||++|||+++|++|+++|++|+++.|+. +..+...+++...+.++.++.+|++|.++++++++++.+.+
T Consensus         4 ~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~   83 (261)
T PRK08936          4 DLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEF   83 (261)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            47899999999999999999999999999999988854 45566666776666678899999999999999999999999


Q ss_pred             CCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccc
Q 022103          106 AALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILE  184 (302)
Q Consensus       106 g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~  184 (302)
                      +++|++|||||...+ ++.+.+.++|++.+++|+.+++++++.++++|.+....++||++||..+..+.           
T Consensus        84 g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~~~-----------  152 (261)
T PRK08936         84 GTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQIPW-----------  152 (261)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccCCC-----------
Confidence            999999999997654 56778999999999999999999999999999876456899999998765432           


Q ss_pred             hhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC--
Q 022103          185 DEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ--  262 (302)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~--  262 (302)
                                                     +++.+|+++|+|++.++++++.++.++||+|+.|+||+++|++....  
T Consensus       153 -------------------------------~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~  201 (261)
T PRK08936        153 -------------------------------PLFVHYAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEKFA  201 (261)
T ss_pred             -------------------------------CCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCccccccC
Confidence                                           22468999999999999999999999999999999999999986421  


Q ss_pred             ---------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          263 ---------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       263 ---------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                                     ...++++++..+.+|+. +....++|.++..++...
T Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s-~~~~~~~G~~i~~d~g~~  251 (261)
T PRK08936        202 DPKQRADVESMIPMGYIGKPEEIAAVAAWLAS-SEASYVTGITLFADGGMT  251 (261)
T ss_pred             CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcC-cccCCccCcEEEECCCcc
Confidence                           12568999999999987 567789999998888754

>PRK12743 oxidoreductase; Provisional

Probab=100.00  E-value=1.3e-33  Score=253.71  Aligned_cols=226  Identities=25%  Similarity=0.275  Sum_probs=196.4

Q ss_pred             CcEEEEeCCCchHHHHHHHHHHHcCCEEEEEec-ChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCc
Q 022103           30 ETIAIVTGANKGIGFALVKRLAELGLTVILTAR-DVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAAL  108 (302)
Q Consensus        30 ~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r-~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~i  108 (302)
                      +|+++||||++|||++++++|+++|++|+++.| +.+..+...+++...+.++.++.+|+++.++++++++++.+.++++
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRI   81 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            589999999999999999999999999988865 5566677777777777789999999999999999999999999999


Q ss_pred             cEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhh
Q 022103          109 DILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEE  187 (302)
Q Consensus       109 d~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~  187 (302)
                      |+||||+|.... .+.+.+.+++++++++|+.+++.+++++.+.|.+++..++||++||..+..+..             
T Consensus        82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~-------------  148 (256)
T PRK12743         82 DVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHTPLP-------------  148 (256)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccCCCC-------------
Confidence            999999997644 466789999999999999999999999999997654468999999987654422             


Q ss_pred             hcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC-----
Q 022103          188 LSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ-----  262 (302)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~-----  262 (302)
                                                   ++.+|+++|++++.++++++.++.++||+|++|+||+++|++....     
T Consensus       149 -----------------------------~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~  199 (256)
T PRK12743        149 -----------------------------GASAYTAAKHALGGLTKAMALELVEHGILVNAVAPGAIATPMNGMDDSDVK  199 (256)
T ss_pred             -----------------------------CcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCccccccChHHH
Confidence                                         2468999999999999999999999999999999999999986431     


Q ss_pred             ----------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          263 ----------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       263 ----------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                                ...+|++++..+.+++. +...+++|.++..++...
T Consensus       200 ~~~~~~~~~~~~~~~~dva~~~~~l~~-~~~~~~~G~~~~~dgg~~  244 (256)
T PRK12743        200 PDSRPGIPLGRPGDTHEIASLVAWLCS-EGASYTTGQSLIVDGGFM  244 (256)
T ss_pred             HHHHhcCCCCCCCCHHHHHHHHHHHhC-ccccCcCCcEEEECCCcc
Confidence                      22579999999999986 677889999999998843

>PRK05599 hypothetical protein; Provisional

Probab=100.00  E-value=1.1e-33  Score=253.29  Aligned_cols=207  Identities=20%  Similarity=0.239  Sum_probs=181.6

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCC-ceeEEEeeCCCHHHHHHHHHHHHhhCCCcc
Q 022103           31 TIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGL-PVNFFQLDVSDPSSIEAFVSWFKSNFAALD  109 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id  109 (302)
                      ++++||||++|||+++|+.|+ +|++|++++|+.+++++..+++.+.+. .+.++.+|++|+++++++++++.+.+|++|
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id   79 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEIS   79 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCC
Confidence            479999999999999999999 599999999999999999888877654 478899999999999999999999999999


Q ss_pred             EEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhh
Q 022103          110 ILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEEL  188 (302)
Q Consensus       110 ~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  188 (302)
                      ++|||||.... +..+.+.+.+++++++|+.+.+++++.++|.|.++...++||++||..+..+.+              
T Consensus        80 ~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~--------------  145 (246)
T PRK05599         80 LAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRARR--------------  145 (246)
T ss_pred             EEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccCCc--------------
Confidence            99999998643 445667788889999999999999999999998763468999999998875432              


Q ss_pred             cHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCCC----C
Q 022103          189 SEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQG----S  264 (302)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~~----~  264 (302)
                                                  ++..|++||+|+++|+++|+.|+.++||+|++|+||+++|+|.....    .
T Consensus       146 ----------------------------~~~~Y~asKaa~~~~~~~la~el~~~~I~v~~v~PG~v~T~~~~~~~~~~~~  197 (246)
T PRK05599        146 ----------------------------ANYVYGSTKAGLDAFCQGLADSLHGSHVRLIIARPGFVIGSMTTGMKPAPMS  197 (246)
T ss_pred             ----------------------------CCcchhhHHHHHHHHHHHHHHHhcCCCceEEEecCCcccchhhcCCCCCCCC
Confidence                                        24689999999999999999999999999999999999999876532    2


Q ss_pred             CCHHHHHHHHHHHhhc
Q 022103          265 HTADEAADVGARLLLL  280 (302)
Q Consensus       265 ~~~~~~a~~~~~l~~~  280 (302)
                      .+||++|..+++++..
T Consensus       198 ~~pe~~a~~~~~~~~~  213 (246)
T PRK05599        198 VYPRDVAAAVVSAITS  213 (246)
T ss_pred             CCHHHHHHHHHHHHhc
Confidence            5899999999999873

>PRK06125 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-33  Score=253.75  Aligned_cols=227  Identities=23%  Similarity=0.235  Sum_probs=195.4

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhC-CCceeEEEeeCCCHHHHHHHHHHHHhh
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEK-GLPVNFFQLDVSDPSSIEAFVSWFKSN  104 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dlt~~~~~~~~~~~~~~~  104 (302)
                      +.+++|+++|||+++|||+++++.|+++|++|++++|+.+++++..+++.+. +.++.++.+|+++++++++++++    
T Consensus         3 ~~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~----   78 (259)
T PRK06125          3 LHLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAE----   78 (259)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHH----
Confidence            3468999999999999999999999999999999999998888888777654 45688999999999999988865    


Q ss_pred             CCCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCccccccc
Q 022103          105 FAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSIL  183 (302)
Q Consensus       105 ~g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~  183 (302)
                      ++++|++|||+|.... ++.+.+.++|+.++++|+.++++++++++|.|.++ +.++||++||..+..+.          
T Consensus        79 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~iss~~~~~~~----------  147 (259)
T PRK06125         79 AGDIDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKAR-GSGVIVNVIGAAGENPD----------  147 (259)
T ss_pred             hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCcEEEEecCccccCCC----------
Confidence            4789999999997643 57889999999999999999999999999999876 46899999998765332          


Q ss_pred             chhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCC--
Q 022103          184 EDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG--  261 (302)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~--  261 (302)
                                                      +.+..|+++|+|+++++++++.|+.+.||+||+|+||+++|++...  
T Consensus       148 --------------------------------~~~~~y~ask~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~  195 (259)
T PRK06125        148 --------------------------------ADYICGSAGNAALMAFTRALGGKSLDDGVRVVGVNPGPVATDRMLTLL  195 (259)
T ss_pred             --------------------------------CCchHhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccHHHHHHH
Confidence                                            2246799999999999999999999999999999999999985321  


Q ss_pred             -----------------------CCCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcccCC
Q 022103          262 -----------------------QGSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVKS  300 (302)
Q Consensus       262 -----------------------~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~  300 (302)
                                             ....+|+++|..+++|+. +...+++|.++..+|...+.
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~-~~~~~~~G~~i~vdgg~~~~  256 (259)
T PRK06125        196 KGRARAELGDESRWQELLAGLPLGRPATPEEVADLVAFLAS-PRSGYTSGTVVTVDGGISAR  256 (259)
T ss_pred             HhhhhcccCCHHHHHHHhccCCcCCCcCHHHHHHHHHHHcC-chhccccCceEEecCCeeec
Confidence                                   122579999999999986 67788999999999987654

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=100.00  E-value=6.7e-34  Score=256.32  Aligned_cols=224  Identities=22%  Similarity=0.212  Sum_probs=191.4

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      .+++|+++||||++|||+++|++|+++|++|++++|+.++++...+++   +.++.++.+|++++++++++++++.+.++
T Consensus         3 ~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   79 (263)
T PRK06200          3 WLHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRF---GDHVLVVEGDVTSYADNQRAVDQTVDAFG   79 (263)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCcceEEEccCCCHHHHHHHHHHHHHhcC
Confidence            367899999999999999999999999999999999988877666554   34678899999999999999999999999


Q ss_pred             CccEEEEcCCCCC--CCCCCCCHHH----HHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccc
Q 022103          107 ALDILVNNAGVSF--NDIYKNTVEH----AETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIK  180 (302)
Q Consensus       107 ~id~lv~~aG~~~--~~~~~~~~e~----~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~  180 (302)
                      ++|++|||||+..  .++.+.+.++    |++++++|+.+++.++++++|.|.+.  .++||+++|..+..+...     
T Consensus        80 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~g~iv~~sS~~~~~~~~~-----  152 (263)
T PRK06200         80 KLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKAS--GGSMIFTLSNSSFYPGGG-----  152 (263)
T ss_pred             CCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhc--CCEEEEECChhhcCCCCC-----
Confidence            9999999999753  2455566655    88999999999999999999998765  589999999887654322     


Q ss_pred             cccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCC
Q 022103          181 SILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ  260 (302)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~  260 (302)
                                                           ..+|++||++++.++++++.|+++. |+||+|+||+++|+|..
T Consensus       153 -------------------------------------~~~Y~~sK~a~~~~~~~la~el~~~-Irvn~i~PG~i~t~~~~  194 (263)
T PRK06200        153 -------------------------------------GPLYTASKHAVVGLVRQLAYELAPK-IRVNGVAPGGTVTDLRG  194 (263)
T ss_pred             -------------------------------------CchhHHHHHHHHHHHHHHHHHHhcC-cEEEEEeCCccccCCcC
Confidence                                                 3679999999999999999999874 99999999999999853


Q ss_pred             CC--------------------------CCCCHHHHHHHHHHHhhcCC-CCCCCcceeecCCcccC
Q 022103          261 GQ--------------------------GSHTADEAADVGARLLLLHP-QQLPTAKFYIGLDPFVK  299 (302)
Q Consensus       261 ~~--------------------------~~~~~~~~a~~~~~l~~~~~-~~~~~G~~~~~~~~~~~  299 (302)
                      ..                          ...+|+++|..+.+|+. +. ..+++|+.+..++.+..
T Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~eva~~~~fl~s-~~~~~~itG~~i~vdgG~~~  259 (263)
T PRK06200        195 PASLGQGETSISDSPGLADMIAAITPLQFAPQPEDHTGPYVLLAS-RRNSRALTGVVINADGGLGI  259 (263)
T ss_pred             ccccCCCCcccccccchhHHhhcCCCCCCCCCHHHHhhhhhheec-ccccCcccceEEEEcCceee
Confidence            10                          12578999999999987 55 78899999999988543

>PRK05872 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.9e-34  Score=261.82  Aligned_cols=218  Identities=20%  Similarity=0.238  Sum_probs=189.8

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      .++++|+++||||++|||+++|+.|+++|++|++++|+.+++++..+++.. +.++..+.+|++|.++++++++++.+.+
T Consensus         5 ~~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   83 (296)
T PRK05872          5 TSLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGG-DDRVLTVVADVTDLAAMQAAAEEAVERF   83 (296)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcC-CCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            457899999999999999999999999999999999999998888888754 4466777899999999999999999999


Q ss_pred             CCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccc
Q 022103          106 AALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILE  184 (302)
Q Consensus       106 g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~  184 (302)
                      +++|++|||||.... ++.+.+.++|++++++|+.+++++++.++|.|.+.  .++||++||..+..+.+          
T Consensus        84 g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~--~g~iv~isS~~~~~~~~----------  151 (296)
T PRK05872         84 GGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIER--RGYVLQVSSLAAFAAAP----------  151 (296)
T ss_pred             CCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc--CCEEEEEeCHhhcCCCC----------
Confidence            999999999998644 57788999999999999999999999999999765  58999999988865532          


Q ss_pred             hhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC--
Q 022103          185 DEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ--  262 (302)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~--  262 (302)
                                                      ++..|++||++++.|+++++.|+.++||+|++|+||+++|+|....  
T Consensus       152 --------------------------------~~~~Y~asKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~  199 (296)
T PRK05872        152 --------------------------------GMAAYCASKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDADA  199 (296)
T ss_pred             --------------------------------CchHHHHHHHHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhhccc
Confidence                                            2467999999999999999999999999999999999999986531  


Q ss_pred             -----------------CCCCHHHHHHHHHHHhhcCCCCCCCcc
Q 022103          263 -----------------GSHTADEAADVGARLLLLHPQQLPTAK  289 (302)
Q Consensus       263 -----------------~~~~~~~~a~~~~~l~~~~~~~~~~G~  289 (302)
                                       ...++++++..+.+++. .....+.+.
T Consensus       200 ~~~~~~~~~~~~~~p~~~~~~~~~va~~i~~~~~-~~~~~i~~~  242 (296)
T PRK05872        200 DLPAFRELRARLPWPLRRTTSVEKCAAAFVDGIE-RRARRVYAP  242 (296)
T ss_pred             cchhHHHHHhhCCCcccCCCCHHHHHHHHHHHHh-cCCCEEEch
Confidence                             12579999999999987 344444444

>PRK07856 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-33  Score=252.26  Aligned_cols=222  Identities=23%  Similarity=0.268  Sum_probs=191.8

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      +++++|+++||||++|||++++++|+++|++|++++|+.++        ...+..+.++.+|++++++++++++++.+.+
T Consensus         2 ~~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~--------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   73 (252)
T PRK07856          2 LDLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE--------TVDGRPAEFHAADVRDPDQVAALVDAIVERH   73 (252)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh--------hhcCCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            35789999999999999999999999999999999998754        1124568899999999999999999999999


Q ss_pred             CCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccc
Q 022103          106 AALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILE  184 (302)
Q Consensus       106 g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~  184 (302)
                      +++|++|||||.... .+.+.+.+.|++++++|+.+++.+++++.+.|.++...++||++||..+..+.+          
T Consensus        74 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~----------  143 (252)
T PRK07856         74 GRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPSP----------  143 (252)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCCCC----------
Confidence            999999999997644 467788999999999999999999999999998754568999999988765432          


Q ss_pred             hhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC--
Q 022103          185 DEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ--  262 (302)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~--  262 (302)
                                                      .+..|+++|++++.|+++++.|+.++ |+|++|+||+++|++....  
T Consensus       144 --------------------------------~~~~Y~~sK~a~~~l~~~la~e~~~~-i~v~~i~Pg~v~t~~~~~~~~  190 (252)
T PRK07856        144 --------------------------------GTAAYGAAKAGLLNLTRSLAVEWAPK-VRVNAVVVGLVRTEQSELHYG  190 (252)
T ss_pred             --------------------------------CCchhHHHHHHHHHHHHHHHHHhcCC-eEEEEEEeccccChHHhhhcc
Confidence                                            24789999999999999999999887 9999999999999985421  


Q ss_pred             ---------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcccC
Q 022103          263 ---------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVK  299 (302)
Q Consensus       263 ---------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  299 (302)
                                     ....|+++|..+++|+. +...+++|..+..++...+
T Consensus       191 ~~~~~~~~~~~~~~~~~~~p~~va~~~~~L~~-~~~~~i~G~~i~vdgg~~~  241 (252)
T PRK07856        191 DAEGIAAVAATVPLGRLATPADIAWACLFLAS-DLASYVSGANLEVHGGGER  241 (252)
T ss_pred             CHHHHHHHhhcCCCCCCcCHHHHHHHHHHHcC-cccCCccCCEEEECCCcch
Confidence                           12579999999999986 5677899999999987543

>PRK06523 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.3e-33  Score=252.08  Aligned_cols=223  Identities=28%  Similarity=0.298  Sum_probs=191.9

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      ..+++|+++||||++|||++++++|+++|++|++++|+.++.         ...++.++.+|++|+++++++++++.+.+
T Consensus         5 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~---------~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   75 (260)
T PRK06523          5 LELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD---------LPEGVEFVAADLTTAEGCAAVARAVLERL   75 (260)
T ss_pred             cCCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh---------cCCceeEEecCCCCHHHHHHHHHHHHHHc
Confidence            357899999999999999999999999999999999986531         12367889999999999999999999999


Q ss_pred             CCccEEEEcCCCCC---CCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccc
Q 022103          106 AALDILVNNAGVSF---NDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSI  182 (302)
Q Consensus       106 g~id~lv~~aG~~~---~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~  182 (302)
                      +++|+||||||...   .++.+.+.++|++.+++|+.+++.++++++|.|.++ +.++||++||..+..+.         
T Consensus        76 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~ii~isS~~~~~~~---------  145 (260)
T PRK06523         76 GGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIAR-GSGVIIHVTSIQRRLPL---------  145 (260)
T ss_pred             CCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhc-CCcEEEEEecccccCCC---------
Confidence            99999999999652   246678999999999999999999999999999876 56899999998776432         


Q ss_pred             cchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCC-
Q 022103          183 LEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG-  261 (302)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~-  261 (302)
                                                      ++.+.+|+++|++++.++++++.++.++||+|++|+||+|+|++... 
T Consensus       146 --------------------------------~~~~~~Y~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~~  193 (260)
T PRK06523        146 --------------------------------PESTTAYAAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAVAL  193 (260)
T ss_pred             --------------------------------CCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccHHHH
Confidence                                            22347899999999999999999999999999999999999997421 


Q ss_pred             ---------------------------C-CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcccCC
Q 022103          262 ---------------------------Q-GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVKS  300 (302)
Q Consensus       262 ---------------------------~-~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~  300 (302)
                                                 . ....|+++|+.+.+|+. +...+++|..+..+|...++
T Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~~~~l~s-~~~~~~~G~~~~vdgg~~~~  259 (260)
T PRK06523        194 AERLAEAAGTDYEGAKQIIMDSLGGIPLGRPAEPEEVAELIAFLAS-DRAASITGTEYVIDGGTVPT  259 (260)
T ss_pred             HHHHHhhcCCCHHHHHHHHHHHhccCccCCCCCHHHHHHHHHHHhC-cccccccCceEEecCCccCC
Confidence                                       0 12578999999999997 56778999999999886653

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=100.00  E-value=9e-34  Score=255.51  Aligned_cols=224  Identities=20%  Similarity=0.162  Sum_probs=186.9

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+.   .+.++.++.+|+++.+++.++++++.++++
T Consensus         2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   78 (262)
T TIGR03325         2 RLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAA---HGDAVVGVEGDVRSLDDHKEAVARCVAAFG   78 (262)
T ss_pred             CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhh---cCCceEEEEeccCCHHHHHHHHHHHHHHhC
Confidence            46799999999999999999999999999999999998776665432   244688899999999999999999999999


Q ss_pred             CccEEEEcCCCCC--CCCCCCCH----HHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccc
Q 022103          107 ALDILVNNAGVSF--NDIYKNTV----EHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIK  180 (302)
Q Consensus       107 ~id~lv~~aG~~~--~~~~~~~~----e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~  180 (302)
                      ++|+||||||...  .++.+.+.    +.|++++++|+.++++++++++|.|.+.  .++||+++|..+..+..      
T Consensus        79 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~--~g~iv~~sS~~~~~~~~------  150 (262)
T TIGR03325        79 KIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVAS--RGSVIFTISNAGFYPNG------  150 (262)
T ss_pred             CCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhc--CCCEEEEeccceecCCC------
Confidence            9999999999743  23333333    5799999999999999999999999765  48899999988764422      


Q ss_pred             cccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCC
Q 022103          181 SILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ  260 (302)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~  260 (302)
                                                          .+..|++||+|+++|+++++.|++++ |+||+|+||+++|+|..
T Consensus       151 ------------------------------------~~~~Y~~sKaa~~~l~~~la~e~~~~-irvn~i~PG~i~t~~~~  193 (262)
T TIGR03325       151 ------------------------------------GGPLYTAAKHAVVGLVKELAFELAPY-VRVNGVAPGGMSSDLRG  193 (262)
T ss_pred             ------------------------------------CCchhHHHHHHHHHHHHHHHHhhccC-eEEEEEecCCCcCCCcc
Confidence                                                23679999999999999999999886 99999999999999853


Q ss_pred             CC-------------------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          261 GQ-------------------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       261 ~~-------------------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                      ..                         +..+|+++|..+++|++.....+++|..+..++...
T Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~eva~~~~~l~s~~~~~~~tG~~i~vdgg~~  256 (262)
T TIGR03325       194 PKSLGMADKSISTVPLGDMLKSVLPIGRMPDAEEYTGAYVFFATRGDTVPATGAVLNYDGGMG  256 (262)
T ss_pred             ccccccccccccccchhhhhhhcCCCCCCCChHHhhhheeeeecCCCcccccceEEEecCCee
Confidence            10                         125789999999999873345679999999988743

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK06940 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.2e-33  Score=255.43  Aligned_cols=241  Identities=23%  Similarity=0.304  Sum_probs=186.6

Q ss_pred             CcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCcc
Q 022103           30 ETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALD  109 (302)
Q Consensus        30 ~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id  109 (302)
                      +|+++|||+ +|||+++|++|+ +|++|++++|+.+++++..+++...+.++.++.+|++|.+++.++++++ ++++++|
T Consensus         2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~-~~~g~id   78 (275)
T PRK06940          2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATA-QTLGPVT   78 (275)
T ss_pred             CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHH-HhcCCCC
Confidence            579999998 699999999996 8999999999998888888888766668889999999999999999998 5679999


Q ss_pred             EEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhhc
Q 022103          110 ILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELS  189 (302)
Q Consensus       110 ~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~  189 (302)
                      +||||||...      ..++|++++++|+.+++++++++.|.|.++   +++|+++|..+..+......        .  
T Consensus        79 ~li~nAG~~~------~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~---g~iv~isS~~~~~~~~~~~~--------~--  139 (275)
T PRK06940         79 GLVHTAGVSP------SQASPEAILKVDLYGTALVLEEFGKVIAPG---GAGVVIASQSGHRLPALTAE--------Q--  139 (275)
T ss_pred             EEEECCCcCC------chhhHHHHHHHhhHHHHHHHHHHHHHHhhC---CCEEEEEecccccCcccchh--------h--
Confidence            9999999752      236799999999999999999999999653   77899999887654200000        0  


Q ss_pred             HHHHHHHHHHHHhhhcc-CCC-CCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC-----
Q 022103          190 EEQIERFVGLFLQSVKD-GTW-KSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ-----  262 (302)
Q Consensus       190 ~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~-----  262 (302)
                          .+.+..+...... .+. ......+++.+|++||+|++.++++++.|++++|||||+|+||+++|+|....     
T Consensus       140 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~~~~~~~  215 (275)
T PRK06940        140 ----ERALATTPTEELLSLPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDELNGPR  215 (275)
T ss_pred             ----hccccccccccccccccccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchhhhcCCc
Confidence                0000000000000 000 00000023578999999999999999999999999999999999999985321     


Q ss_pred             --------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          263 --------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       263 --------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                                    +..+|+++|..+.+|++ +...+++|+.+..++..
T Consensus       216 ~~~~~~~~~~~p~~r~~~peeia~~~~fL~s-~~~~~itG~~i~vdgg~  263 (275)
T PRK06940        216 GDGYRNMFAKSPAGRPGTPDEIAALAEFLMG-PRGSFITGSDFLVDGGA  263 (275)
T ss_pred             hHHHHHHhhhCCcccCCCHHHHHHHHHHHcC-cccCcccCceEEEcCCe
Confidence                          12579999999999987 67788999999998874

>PRK08278 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.1e-33  Score=255.16  Aligned_cols=224  Identities=27%  Similarity=0.371  Sum_probs=191.6

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhh-------HHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHH
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVER-------GQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVS   99 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~-------~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~   99 (302)
                      .+++|+++||||++|||.++|+.|+++|++|++++|+.+.       +++..+++...+.++.++.+|+++.+++.++++
T Consensus         3 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~   82 (273)
T PRK08278          3 SLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVA   82 (273)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHH
Confidence            4678999999999999999999999999999999998653       455666676667788999999999999999999


Q ss_pred             HHHhhCCCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcc
Q 022103          100 WFKSNFAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPN  178 (302)
Q Consensus       100 ~~~~~~g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~  178 (302)
                      ++.+.++++|+||||||.... ++.+.+.+++++++++|+.++++++++++|.|.++ +.++|++++|..+..+.     
T Consensus        83 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~-~~g~iv~iss~~~~~~~-----  156 (273)
T PRK08278         83 KAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKS-ENPHILTLSPPLNLDPK-----  156 (273)
T ss_pred             HHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhc-CCCEEEEECCchhcccc-----
Confidence            999999999999999997643 56778999999999999999999999999999876 56899999987654221     


Q ss_pred             cccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecC-cccCC
Q 022103          179 IKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPG-FTQTS  257 (302)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG-~v~T~  257 (302)
                                                         +++++.+|++||++++.++++++.|+.++||+|++|+|| +++|+
T Consensus       157 -----------------------------------~~~~~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~  201 (273)
T PRK08278        157 -----------------------------------WFAPHTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATA  201 (273)
T ss_pred             -----------------------------------ccCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccH
Confidence                                               113357899999999999999999999999999999999 68897


Q ss_pred             CCCCC--------CCCCHHHHHHHHHHHhhcCCCCCCCcceee
Q 022103          258 MTQGQ--------GSHTADEAADVGARLLLLHPQQLPTAKFYI  292 (302)
Q Consensus       258 ~~~~~--------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~  292 (302)
                      +.+..        ...+|+++|+.+++++. +....++|+++.
T Consensus       202 ~~~~~~~~~~~~~~~~~p~~va~~~~~l~~-~~~~~~~G~~~~  243 (273)
T PRK08278        202 AVRNLLGGDEAMRRSRTPEIMADAAYEILS-RPAREFTGNFLI  243 (273)
T ss_pred             HHHhcccccccccccCCHHHHHHHHHHHhc-CccccceeEEEe
Confidence            64432        23689999999999987 566679999885

>PRK06484 short chain dehydrogenase; Validated

Probab=100.00  E-value=1.8e-33  Score=277.09  Aligned_cols=222  Identities=24%  Similarity=0.313  Sum_probs=195.9

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      ...+|+++||||++|||+++|++|+++|++|++++|+.+++++..+++   +.++..+.+|++|+++++++++++.+++|
T Consensus       266 ~~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  342 (520)
T PRK06484        266 AESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEAL---GDEHLSVQADITDEAAVESAFAQIQARWG  342 (520)
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceeEEEccCCCHHHHHHHHHHHHHHcC
Confidence            458999999999999999999999999999999999988887776655   34677899999999999999999999999


Q ss_pred             CccEEEEcCCCCC--CCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccc
Q 022103          107 ALDILVNNAGVSF--NDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILE  184 (302)
Q Consensus       107 ~id~lv~~aG~~~--~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~  184 (302)
                      ++|+||||||...  .++.+.+.++|++++++|+.++++++++++|.|.   ..++||++||..+..+.+          
T Consensus       343 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~---~~g~iv~isS~~~~~~~~----------  409 (520)
T PRK06484        343 RLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMS---QGGVIVNLGSIASLLALP----------  409 (520)
T ss_pred             CCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhc---cCCEEEEECchhhcCCCC----------
Confidence            9999999999863  3567889999999999999999999999999993   358999999998875532          


Q ss_pred             hhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC--
Q 022103          185 DEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ--  262 (302)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~--  262 (302)
                                                      ++.+|+++|+++++|+++|+.|+.++||+||+|+||+|+|+|....  
T Consensus       410 --------------------------------~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~  457 (520)
T PRK06484        410 --------------------------------PRNAYCASKAAVTMLSRSLACEWAPAGIRVNTVAPGYIETPAVLALKA  457 (520)
T ss_pred             --------------------------------CCchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCchhhhhcc
Confidence                                            2478999999999999999999999999999999999999986431  


Q ss_pred             ----------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          263 ----------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       263 ----------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                                      ...+|+++|..+++|+. +...+++|+++..++.+
T Consensus       458 ~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~s-~~~~~~~G~~i~vdgg~  507 (520)
T PRK06484        458 SGRADFDSIRRRIPLGRLGDPEEVAEAIAFLAS-PAASYVNGATLTVDGGW  507 (520)
T ss_pred             ccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC-ccccCccCcEEEECCCc
Confidence                            12579999999999987 66778999999999874

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=3.4e-34  Score=263.90  Aligned_cols=229  Identities=19%  Similarity=0.167  Sum_probs=179.4

Q ss_pred             ccccccCcEEEEeCCC--chHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHH----------hhCCC-----ceeEEEe
Q 022103           24 TKWWSKETIAIVTGAN--KGIGFALVKRLAELGLTVILTARDVERGQRAVESL----------SEKGL-----PVNFFQL   86 (302)
Q Consensus        24 ~~~~~~~k~vlItGas--~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l----------~~~~~-----~~~~~~~   86 (302)
                      +...+.||+++|||++  +|||+++|+.|+++|++|++.+|.. +++...+..          ...+.     ++..+.+
T Consensus         2 ~~~~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~   80 (299)
T PRK06300          2 LKIDLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVP-IYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDA   80 (299)
T ss_pred             CCcCCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccc-hhhhhhhhcccccccccccccccchhhhhhHHHhhh
Confidence            3567899999999996  9999999999999999999977542 111111100          00111     1112233


Q ss_pred             eCCCH------------------HHHHHHHHHHHhhCCCccEEEEcCCCCC---CCCCCCCHHHHHHHHHhhhhHHHHHH
Q 022103           87 DVSDP------------------SSIEAFVSWFKSNFAALDILVNNAGVSF---NDIYKNTVEHAETVIRTNFYGAKLLT  145 (302)
Q Consensus        87 Dlt~~------------------~~~~~~~~~~~~~~g~id~lv~~aG~~~---~~~~~~~~e~~~~~~~vn~~~~~~l~  145 (302)
                      |+++.                  ++++++++++.+++|++|+||||||...   .++.+.+.++|++++++|++++++++
T Consensus        81 d~~~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~  160 (299)
T PRK06300         81 SFDTPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLL  160 (299)
T ss_pred             hcCCCEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHH
Confidence            43333                  3589999999999999999999998643   36788999999999999999999999


Q ss_pred             HHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhH
Q 022103          146 ESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSK  225 (302)
Q Consensus       146 ~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK  225 (302)
                      ++++|+|.+   .|+||+++|..+..+.+                                         .....|++||
T Consensus       161 ~a~~p~m~~---~G~ii~iss~~~~~~~p-----------------------------------------~~~~~Y~asK  196 (299)
T PRK06300        161 SHFGPIMNP---GGSTISLTYLASMRAVP-----------------------------------------GYGGGMSSAK  196 (299)
T ss_pred             HHHHHHhhc---CCeEEEEeehhhcCcCC-----------------------------------------CccHHHHHHH
Confidence            999999965   37899999988764432                                         1113699999


Q ss_pred             HHHHHHHHHHHHHccC-CCcEEEEeecCcccCCCCCCC-----------------CCCCHHHHHHHHHHHhhcCCCCCCC
Q 022103          226 LALNAYTMVLAKRYEG-EGISVNSYCPGFTQTSMTQGQ-----------------GSHTADEAADVGARLLLLHPQQLPT  287 (302)
Q Consensus       226 ~a~~~~~~~la~e~~~-~gI~V~~v~PG~v~T~~~~~~-----------------~~~~~~~~a~~~~~l~~~~~~~~~~  287 (302)
                      +|+++|+++|+.|+++ +|||||+|+||+++|+|....                 ...+|++++..+++|++ +...+++
T Consensus       197 aAl~~lt~~la~el~~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~~L~s-~~~~~it  275 (299)
T PRK06300        197 AALESDTKVLAWEAGRRWGIRVNTISAGPLASRAGKAIGFIERMVDYYQDWAPLPEPMEAEQVGAAAAFLVS-PLASAIT  275 (299)
T ss_pred             HHHHHHHHHHHHHhCCCCCeEEEEEEeCCccChhhhcccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC-ccccCCC
Confidence            9999999999999987 599999999999999986421                 23579999999999987 6678899


Q ss_pred             cceeecCCccc
Q 022103          288 AKFYIGLDPFV  298 (302)
Q Consensus       288 G~~~~~~~~~~  298 (302)
                      |+++..++...
T Consensus       276 G~~i~vdGG~~  286 (299)
T PRK06300        276 GETLYVDHGAN  286 (299)
T ss_pred             CCEEEECCCcc
Confidence            99999998754

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=100.00  E-value=3e-33  Score=251.08  Aligned_cols=226  Identities=23%  Similarity=0.271  Sum_probs=195.9

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      .+.+|+++|||+++|||+++|+.|+++|++|++++|+.++.+...+++.   .++.++.+|++|+++++++++++.+.++
T Consensus         3 ~l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (257)
T PRK07067          3 RLQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIG---PAAIAVSLDVTRQDSIDRIVAAAVERFG   79 (257)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhC---CceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            3678999999999999999999999999999999999988777666553   3688899999999999999999999999


Q ss_pred             CccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccch
Q 022103          107 ALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILED  185 (302)
Q Consensus       107 ~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~  185 (302)
                      ++|++|||||.... ++.+.+.++++.++++|+.+++++++++++.|.++...++||++||..+..+.+           
T Consensus        80 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-----------  148 (257)
T PRK07067         80 GIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGEA-----------  148 (257)
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCCCC-----------
Confidence            99999999997643 567789999999999999999999999999987754458999999987654422           


Q ss_pred             hhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC---
Q 022103          186 EELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ---  262 (302)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~---  262 (302)
                                                     ++.+|++||++++.++++++.|+.++||+|+.|+||+++|+++...   
T Consensus       149 -------------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~  197 (257)
T PRK07067        149 -------------------------------LVSHYCATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQVDAL  197 (257)
T ss_pred             -------------------------------CCchhhhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhhhhhh
Confidence                                           2478999999999999999999999999999999999999874321   


Q ss_pred             -----------------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          263 -----------------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       263 -----------------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                                             ...+|+++|..+.+|+. +...+++|..+..+++..
T Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s-~~~~~~~g~~~~v~gg~~  255 (257)
T PRK07067        198 FARYENRPPGEKKRLVGEAVPLGRMGVPDDLTGMALFLAS-ADADYIVAQTYNVDGGNW  255 (257)
T ss_pred             hhhccCCCHHHHHHHHhhcCCCCCccCHHHHHHHHHHHhC-cccccccCcEEeecCCEe
Confidence                                   12468999999999997 567789999999988754

>PRK08628 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.3e-33  Score=250.71  Aligned_cols=228  Identities=27%  Similarity=0.295  Sum_probs=195.5

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      .++++|+++||||++|||+++|++|+++|++|++++|+.++. +..+++.+.+.++.++.+|+++++++.++++++.+.+
T Consensus         3 ~~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (258)
T PRK08628          3 LNLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKF   81 (258)
T ss_pred             CCcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhc
Confidence            568999999999999999999999999999999999998776 6667777667788999999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccch
Q 022103          106 AALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILED  185 (302)
Q Consensus       106 g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~  185 (302)
                      +.+|++|||||.......+.+.++|+..+++|+.+++++++.+++.|++.  .++||++||..+..+.            
T Consensus        82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~~iv~~ss~~~~~~~------------  147 (258)
T PRK08628         82 GRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKAS--RGAIVNISSKTALTGQ------------  147 (258)
T ss_pred             CCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhcc--CcEEEEECCHHhccCC------------
Confidence            99999999999754422333449999999999999999999999998764  5899999998876442            


Q ss_pred             hhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCC----
Q 022103          186 EELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG----  261 (302)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~----  261 (302)
                                                    +.+.+|++||++++.++++++.|+.++||+|+.|+||.++|++...    
T Consensus       148 ------------------------------~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~~~~~  197 (258)
T PRK08628        148 ------------------------------GGTSGYAAAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYENWIAT  197 (258)
T ss_pred             ------------------------------CCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHHHhhh
Confidence                                          2247899999999999999999998899999999999999987431    


Q ss_pred             ------------------CCCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcccC
Q 022103          262 ------------------QGSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVK  299 (302)
Q Consensus       262 ------------------~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  299 (302)
                                        ....+|+++|..+++++. +.....+|.++..++....
T Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~-~~~~~~~g~~~~~~gg~~~  252 (258)
T PRK08628        198 FDDPEAKLAAITAKIPLGHRMTTAEEIADTAVFLLS-ERSSHTTGQWLFVDGGYVH  252 (258)
T ss_pred             ccCHHHHHHHHHhcCCccccCCCHHHHHHHHHHHhC-hhhccccCceEEecCCccc
Confidence                              023678999999999987 5667789999988877543

>PRK08226 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.7e-33  Score=251.14  Aligned_cols=229  Identities=28%  Similarity=0.326  Sum_probs=194.7

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      .+++|+++||||++|||++++++|+++|++|++++|+.+ .+...+++...+.++.++.+|++++++++++++++.++++
T Consensus         3 ~~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   81 (263)
T PRK08226          3 KLTGKTALITGALQGIGEGIARVFARHGANLILLDISPE-IEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEG   81 (263)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHH-HHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            367899999999999999999999999999999999874 4455555555556788999999999999999999999999


Q ss_pred             CccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccch
Q 022103          107 ALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILED  185 (302)
Q Consensus       107 ~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~  185 (302)
                      ++|++|||||.... ++.+.+.+++++.+++|+.+++.+++.+++.|.+. ..++||++||..+....            
T Consensus        82 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~isS~~~~~~~------------  148 (263)
T PRK08226         82 RIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIAR-KDGRIVMMSSVTGDMVA------------  148 (263)
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-CCcEEEEECcHHhcccC------------
Confidence            99999999997643 56778899999999999999999999999998766 46899999997653211            


Q ss_pred             hhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC---
Q 022103          186 EELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ---  262 (302)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~---  262 (302)
                                                   .+.+..|+++|+++++++++++.++.++||+|++|+||+++|+|.+..   
T Consensus       149 -----------------------------~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~  199 (263)
T PRK08226        149 -----------------------------DPGETAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQ  199 (263)
T ss_pred             -----------------------------CCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhh
Confidence                                         122467999999999999999999998999999999999999975421   


Q ss_pred             --------------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcccC
Q 022103          263 --------------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVK  299 (302)
Q Consensus       263 --------------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  299 (302)
                                          ...+|+++|..+.+|+. +...+++|+.+..+|....
T Consensus       200 ~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~~~~l~~-~~~~~~~g~~i~~dgg~~~  255 (263)
T PRK08226        200 SNPEDPESVLTEMAKAIPLRRLADPLEVGELAAFLAS-DESSYLTGTQNVIDGGSTL  255 (263)
T ss_pred             ccCCCcHHHHHHHhccCCCCCCCCHHHHHHHHHHHcC-chhcCCcCceEeECCCccc
Confidence                                12479999999999986 5667899999999988643

>PRK07814 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.9e-33  Score=249.64  Aligned_cols=233  Identities=24%  Similarity=0.317  Sum_probs=201.4

Q ss_pred             cccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhh
Q 022103           25 KWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSN  104 (302)
Q Consensus        25 ~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~  104 (302)
                      ...+++++++||||++|||++++++|+++|++|++++|+.+++++..+.+...+.++.++.+|+++++++.++++++.+.
T Consensus         5 ~~~~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   84 (263)
T PRK07814          5 RFRLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEA   84 (263)
T ss_pred             cccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            34578999999999999999999999999999999999998888888887766667889999999999999999999999


Q ss_pred             CCCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCccccccc
Q 022103          105 FAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSIL  183 (302)
Q Consensus       105 ~g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~  183 (302)
                      ++++|+||||||.... .+.+.+.++++.++++|+.+++.+++++.+.|.+....++||++||..+..+.+         
T Consensus        85 ~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~---------  155 (263)
T PRK07814         85 FGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRLAGR---------  155 (263)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccCCCC---------
Confidence            9999999999997543 467789999999999999999999999999998744678999999988765432         


Q ss_pred             chhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC-
Q 022103          184 EDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ-  262 (302)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~-  262 (302)
                                                       ++..|+++|++++.++++++.++.+ +|+|++|+||++.|++.... 
T Consensus       156 ---------------------------------~~~~Y~~sK~a~~~~~~~~~~e~~~-~i~v~~i~Pg~v~t~~~~~~~  201 (263)
T PRK07814        156 ---------------------------------GFAAYGTAKAALAHYTRLAALDLCP-RIRVNAIAPGSILTSALEVVA  201 (263)
T ss_pred             ---------------------------------CCchhHHHHHHHHHHHHHHHHHHCC-CceEEEEEeCCCcCchhhhcc
Confidence                                             2467999999999999999999876 69999999999999875421 


Q ss_pred             ----------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcccCCC
Q 022103          263 ----------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVKSN  301 (302)
Q Consensus       263 ----------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~~  301 (302)
                                      ...+++++|..+++++. +...+++|.++..++.....+
T Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~-~~~~~~~g~~~~~~~~~~~~~  255 (263)
T PRK07814        202 ANDELRAPMEKATPLRRLGDPEDIAAAAVYLAS-PAGSYLTGKTLEVDGGLTFPN  255 (263)
T ss_pred             CCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcC-ccccCcCCCEEEECCCccCCC
Confidence                            11478999999999986 566789999999988755444

>TIGR02415 23BDH acetoin reductases

Probab=100.00  E-value=5.4e-33  Score=248.38  Aligned_cols=225  Identities=26%  Similarity=0.385  Sum_probs=199.4

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCccE
Q 022103           31 TIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDI  110 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id~  110 (302)
                      |+++|||++|+||.+++++|+++|++|++++|+.+.+++..+++...+.++.++.+|++|++++.++++++.+.++.+|+
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~   80 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDV   80 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            68999999999999999999999999999999988888888888777778899999999999999999999999999999


Q ss_pred             EEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhhc
Q 022103          111 LVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELS  189 (302)
Q Consensus       111 lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~  189 (302)
                      ||||+|.... ++.+.+.++++.++++|+.+++.+++.+++.|.+.+..++||++||..+..+.+               
T Consensus        81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~---------------  145 (254)
T TIGR02415        81 MVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGNP---------------  145 (254)
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCCC---------------
Confidence            9999998644 567889999999999999999999999999998864458999999988765532               


Q ss_pred             HHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC-------
Q 022103          190 EEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ-------  262 (302)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~-------  262 (302)
                                                 .+..|+++|++++.+++.++.++.+.||+|+.|+||+++|+++...       
T Consensus       146 ---------------------------~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~  198 (254)
T TIGR02415       146 ---------------------------ILSAYSSTKFAVRGLTQTAAQELAPKGITVNAYCPGIVKTPMWEEIDEETSEI  198 (254)
T ss_pred             ---------------------------CCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccChhhhhhhhhhhhc
Confidence                                       2478999999999999999999998999999999999999986431       


Q ss_pred             -------------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          263 -------------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       263 -------------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                                         ...+|++++..+.+|+. +....++|.++..++...
T Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~-~~~~~~~g~~~~~d~g~~  252 (254)
T TIGR02415       199 AGKPIGEGFEEFSSEIALGRPSEPEDVAGLVSFLAS-EDSDYITGQSILVDGGMV  252 (254)
T ss_pred             ccCchHHHHHHHHhhCCCCCCCCHHHHHHHHHhhcc-cccCCccCcEEEecCCcc
Confidence                               13678999999999987 567779999999998753

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK05854 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.1e-33  Score=257.73  Aligned_cols=236  Identities=26%  Similarity=0.315  Sum_probs=190.7

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhC--CCceeEEEeeCCCHHHHHHHHHHHHh
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEK--GLPVNFFQLDVSDPSSIEAFVSWFKS  103 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dlt~~~~~~~~~~~~~~  103 (302)
                      .++++|+++||||++|||+++|++|+++|++|++++|+.++.++..+++.+.  +.++.++.+|++|.++++++++++.+
T Consensus        10 ~~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~   89 (313)
T PRK05854         10 PDLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRA   89 (313)
T ss_pred             cccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999999988888887654  34688999999999999999999999


Q ss_pred             hCCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCccccccc
Q 022103          104 NFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSIL  183 (302)
Q Consensus       104 ~~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~  183 (302)
                      .++++|+||||||....+..+.+.++++.++++|+++++.+++.++|.|.+.  .++||++||..+..+......+    
T Consensus        90 ~~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~--~~riv~vsS~~~~~~~~~~~~~----  163 (313)
T PRK05854         90 EGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAG--RARVTSQSSIAARRGAINWDDL----  163 (313)
T ss_pred             hCCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhC--CCCeEEEechhhcCCCcCcccc----
Confidence            9999999999999875544567889999999999999999999999999765  5899999999876543221100    


Q ss_pred             chhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHc--cCCCcEEEEeecCcccCCCCCC
Q 022103          184 EDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRY--EGEGISVNSYCPGFTQTSMTQG  261 (302)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~--~~~gI~V~~v~PG~v~T~~~~~  261 (302)
                                              .  ....+.++..|+.||+|++.|++.|++++  ...||+||+|+||+|.|++...
T Consensus       164 ------------------------~--~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~~~~~  217 (313)
T PRK05854        164 ------------------------N--WERSYAGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTNLLAA  217 (313)
T ss_pred             ------------------------c--ccccCcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccCcccc
Confidence                                    0  00113345789999999999999999864  4578999999999999998642


Q ss_pred             C-----------------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCC
Q 022103          262 Q-----------------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLD  295 (302)
Q Consensus       262 ~-----------------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~  295 (302)
                      .                       ...++++.|...++++..+..  .+|.||...+
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ga~~~l~~a~~~~~--~~g~~~~~~~  272 (313)
T PRK05854        218 RPEVGRDKDTLMVRLIRSLSARGFLVGTVESAILPALYAATSPDA--EGGAFYGPRG  272 (313)
T ss_pred             ccccccchhHHHHHHHHHHhhcccccCCHHHHHHHhhheeeCCCC--CCCcEECCCc
Confidence            1                       013567777777777653333  3688887653

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=100.00  E-value=1.4e-34  Score=257.89  Aligned_cols=214  Identities=34%  Similarity=0.421  Sum_probs=187.4

Q ss_pred             CCC--chHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC-CCccEEEE
Q 022103           37 GAN--KGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF-AALDILVN  113 (302)
Q Consensus        37 Gas--~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~-g~id~lv~  113 (302)
                      |++  +|||+++|++|+++|++|++++|+.+++++..+++.+..+ ..++.+|++++++++++++++.+.+ |++|+|||
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~-~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV~   79 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYG-AEVIQCDLSDEESVEALFDEAVERFGGRIDILVN   79 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTT-SEEEESCTTSHHHHHHHHHHHHHHHCSSESEEEE
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcC-CceEeecCcchHHHHHHHHHHHhhcCCCeEEEEe
Confidence            566  9999999999999999999999999987777766655332 3369999999999999999999999 99999999


Q ss_pred             cCCCCCC-----CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhh
Q 022103          114 NAGVSFN-----DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEEL  188 (302)
Q Consensus       114 ~aG~~~~-----~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  188 (302)
                      |+|....     ++.+.+.++|+..+++|+.+++.+++++.|+|++.   ++||++||..+..+.               
T Consensus        80 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---gsii~iss~~~~~~~---------------  141 (241)
T PF13561_consen   80 NAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKG---GSIINISSIAAQRPM---------------  141 (241)
T ss_dssp             EEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHE---EEEEEEEEGGGTSBS---------------
T ss_pred             cccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC---CCcccccchhhcccC---------------
Confidence            9997643     57788999999999999999999999999988865   999999998775442               


Q ss_pred             cHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccC-CCcEEEEeecCcccCCCCCCC-----
Q 022103          189 SEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEG-EGISVNSYCPGFTQTSMTQGQ-----  262 (302)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~-~gI~V~~v~PG~v~T~~~~~~-----  262 (302)
                                                 +++..|+++|+|+++|+++||.||++ +|||||+|+||++.|++....     
T Consensus       142 ---------------------------~~~~~y~~sKaal~~l~r~lA~el~~~~gIrVN~V~pG~i~t~~~~~~~~~~~  194 (241)
T PF13561_consen  142 ---------------------------PGYSAYSASKAALEGLTRSLAKELAPKKGIRVNAVSPGPIETPMTERIPGNEE  194 (241)
T ss_dssp             ---------------------------TTTHHHHHHHHHHHHHHHHHHHHHGGHGTEEEEEEEESSBSSHHHHHHHTHHH
T ss_pred             ---------------------------ccchhhHHHHHHHHHHHHHHHHHhccccCeeeeeecccceeccchhccccccc
Confidence                                       22468999999999999999999999 999999999999999884422     


Q ss_pred             -----------CC-CCHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          263 -----------GS-HTADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       263 -----------~~-~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                                 +. .+|+|+|..+.+|++ +...+++|+.+..||++
T Consensus       195 ~~~~~~~~~pl~r~~~~~evA~~v~fL~s-~~a~~itG~~i~vDGG~  240 (241)
T PF13561_consen  195 FLEELKKRIPLGRLGTPEEVANAVLFLAS-DAASYITGQVIPVDGGF  240 (241)
T ss_dssp             HHHHHHHHSTTSSHBEHHHHHHHHHHHHS-GGGTTGTSEEEEESTTG
T ss_pred             hhhhhhhhhccCCCcCHHHHHHHHHHHhC-ccccCccCCeEEECCCc
Confidence                       11 689999999999997 67789999999999986

...

>PRK06949 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.3e-33  Score=247.43  Aligned_cols=229  Identities=28%  Similarity=0.361  Sum_probs=199.8

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      .++++|+++||||+||||+++++.|+++|++|++++|+.+++++...++...+.++.++.+|+++.++++++++++.+.+
T Consensus         5 ~~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (258)
T PRK06949          5 INLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEA   84 (258)
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhc
Confidence            44789999999999999999999999999999999999999888888877666678999999999999999999999999


Q ss_pred             CCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCC-------CCcEEEecCCCcccccccCc
Q 022103          106 AALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPS-------KSRILNISSRLGTLSKVRNP  177 (302)
Q Consensus       106 g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~-------~~~iv~vsS~~~~~~~~~~~  177 (302)
                      +++|++|||+|.... ++.+.+.++|+.++++|+.+++.+++++++.|.++..       .++||+++|..+..+.+   
T Consensus        85 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~---  161 (258)
T PRK06949         85 GTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVLP---  161 (258)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCCCC---
Confidence            999999999997543 4567788999999999999999999999999876532       47999999987754322   


Q ss_pred             ccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCC
Q 022103          178 NIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTS  257 (302)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~  257 (302)
                                                             ...+|+++|++++.+++.++.++.++||+|++|+||+++|+
T Consensus       162 ---------------------------------------~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~  202 (258)
T PRK06949        162 ---------------------------------------QIGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTE  202 (258)
T ss_pred             ---------------------------------------CccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCC
Confidence                                                   23679999999999999999999889999999999999999


Q ss_pred             CCCCC----------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          258 MTQGQ----------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       258 ~~~~~----------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                      +....                ....|++++..+.+|+. +...+++|.++..+|.+
T Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~-~~~~~~~G~~i~~dgg~  257 (258)
T PRK06949        203 INHHHWETEQGQKLVSMLPRKRVGKPEDLDGLLLLLAA-DESQFINGAIISADDGF  257 (258)
T ss_pred             cchhccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC-hhhcCCCCcEEEeCCCC
Confidence            85421                23669999999999987 67788999999998864

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=6.2e-33  Score=247.44  Aligned_cols=227  Identities=23%  Similarity=0.237  Sum_probs=196.9

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEE-EecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVIL-TARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l-~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      +++++++||||+||||+++++.|+++|++|++ ..|+.++.++..+++...+.++.++.+|++|++++.++++++.+.++
T Consensus         2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (250)
T PRK08063          2 FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFG   81 (250)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            46789999999999999999999999999876 57888888888888877777889999999999999999999999999


Q ss_pred             CccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccch
Q 022103          107 ALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILED  185 (302)
Q Consensus       107 ~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~  185 (302)
                      ++|+||||+|.... ++.+.+.+.++..+++|+.+++.+++++++.|.++ +.++||++||..+..+.+           
T Consensus        82 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~~sS~~~~~~~~-----------  149 (250)
T PRK08063         82 RLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKV-GGGKIISLSSLGSIRYLE-----------  149 (250)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCeEEEEEcchhhccCCC-----------
Confidence            99999999997643 56788999999999999999999999999999876 568999999976653321           


Q ss_pred             hhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC---
Q 022103          186 EELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ---  262 (302)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~---  262 (302)
                                                     .+..|+++|++++.++++++.++.+.||+|++|+||+++|++....   
T Consensus       150 -------------------------------~~~~y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~~~  198 (250)
T PRK08063        150 -------------------------------NYTTVGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKHFPNR  198 (250)
T ss_pred             -------------------------------CccHHHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhhccCc
Confidence                                           2367999999999999999999988999999999999999885421   


Q ss_pred             --------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          263 --------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       263 --------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                                    ...+++++|..+.+++. ++....+|.++..++...
T Consensus       199 ~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~-~~~~~~~g~~~~~~gg~~  247 (250)
T PRK08063        199 EELLEDARAKTPAGRMVEPEDVANAVLFLCS-PEADMIRGQTIIVDGGRS  247 (250)
T ss_pred             hHHHHHHhcCCCCCCCcCHHHHHHHHHHHcC-chhcCccCCEEEECCCee
Confidence                          13678999999999986 456678999999888754

>PRK06841 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.9e-33  Score=247.33  Aligned_cols=226  Identities=27%  Similarity=0.313  Sum_probs=194.2

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      +++++|+++||||++|||.++|++|+++|++|++++|+.+.. ....++.  +.++.++.+|++++++++++++++.+.+
T Consensus        11 ~~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~-~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   87 (255)
T PRK06841         11 FDLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVA-EVAAQLL--GGNAKGLVCDVSDSQSVEAAVAAVISAF   87 (255)
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHhh--CCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence            457899999999999999999999999999999999987643 3333332  3456789999999999999999999999


Q ss_pred             CCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccc
Q 022103          106 AALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILE  184 (302)
Q Consensus       106 g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~  184 (302)
                      +++|++|||+|.... ++.+.+.+++++.+++|+.+++++++.+.+.|.++ ..++||++||..+..+.+.         
T Consensus        88 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~~sS~~~~~~~~~---------  157 (255)
T PRK06841         88 GRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAA-GGGKIVNLASQAGVVALER---------  157 (255)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhc-CCceEEEEcchhhccCCCC---------
Confidence            999999999997643 56678899999999999999999999999999876 4789999999887654322         


Q ss_pred             hhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC--
Q 022103          185 DEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ--  262 (302)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~--  262 (302)
                                                       +.+|+++|++++.++++++.+++++||+|++|+||+++|++....  
T Consensus       158 ---------------------------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~  204 (255)
T PRK06841        158 ---------------------------------HVAYCASKAGVVGMTKVLALEWGPYGITVNAISPTVVLTELGKKAWA  204 (255)
T ss_pred             ---------------------------------CchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCcccccccc
Confidence                                             367999999999999999999999999999999999999985421  


Q ss_pred             --------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          263 --------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       263 --------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                                    ...+|++++..+++++. +...+++|.++..++.+.
T Consensus       205 ~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~-~~~~~~~G~~i~~dgg~~  253 (255)
T PRK06841        205 GEKGERAKKLIPAGRFAYPEEIAAAALFLAS-DAAAMITGENLVIDGGYT  253 (255)
T ss_pred             hhHHHHHHhcCCCCCCcCHHHHHHHHHHHcC-ccccCccCCEEEECCCcc
Confidence                          12579999999999987 677889999999998764

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=100.00  E-value=8.6e-33  Score=246.16  Aligned_cols=227  Identities=27%  Similarity=0.313  Sum_probs=195.4

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEE-ecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILT-ARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~-~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      +++|+++|||+++|||+++|++|+++|++|++. .|+..+.++..+++.+.+.++..+.+|++|.+++.++++++.+.++
T Consensus         1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (246)
T PRK12938          1 MSQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVG   80 (246)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            468999999999999999999999999998885 4555666666677766677788999999999999999999999999


Q ss_pred             CccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccch
Q 022103          107 ALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILED  185 (302)
Q Consensus       107 ~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~  185 (302)
                      ++|+||||||.... ++.+.+.++|++++++|+.+++.+++++++.|.++ ..++||++||..+..+.            
T Consensus        81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~isS~~~~~~~------------  147 (246)
T PRK12938         81 EIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVER-GWGRIINISSVNGQKGQ------------  147 (246)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCeEEEEEechhccCCC------------
Confidence            99999999998643 56778999999999999999999999999999776 56899999998765442            


Q ss_pred             hhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC---
Q 022103          186 EELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ---  262 (302)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~---  262 (302)
                                                    +++..|+++|++++.++++++.++..+||+|++|+||+++|++....   
T Consensus       148 ------------------------------~~~~~y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~~~~~  197 (246)
T PRK12938        148 ------------------------------FGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRPD  197 (246)
T ss_pred             ------------------------------CCChhHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEecccCCchhhhcChH
Confidence                                          22467999999999999999999999999999999999999986432   


Q ss_pred             ------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          263 ------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       263 ------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                                  ...+++++++.+.+|+. +...+++|..+..+++..
T Consensus       198 ~~~~~~~~~~~~~~~~~~~v~~~~~~l~~-~~~~~~~g~~~~~~~g~~  244 (246)
T PRK12938        198 VLEKIVATIPVRRLGSPDEIGSIVAWLAS-EESGFSTGADFSLNGGLH  244 (246)
T ss_pred             HHHHHHhcCCccCCcCHHHHHHHHHHHcC-cccCCccCcEEEECCccc
Confidence                        13678999999999986 556789999999988753

>PRK05717 oxidoreductase; Validated

Probab=100.00  E-value=1.2e-32  Score=247.15  Aligned_cols=228  Identities=28%  Similarity=0.346  Sum_probs=193.9

Q ss_pred             cccccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHH
Q 022103           23 STKWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFK  102 (302)
Q Consensus        23 ~~~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~  102 (302)
                      ..+.+++||+++||||++|||+++|+.|+++|++|++++|+.++.++..+++   +..+.++.+|+++.++++++++++.
T Consensus         3 ~~~~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~   79 (255)
T PRK05717          3 EPNPGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKAL---GENAWFIAMDVADEAQVAAGVAEVL   79 (255)
T ss_pred             CCCcccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHc---CCceEEEEccCCCHHHHHHHHHHHH
Confidence            4567889999999999999999999999999999999999887766655443   3468899999999999999999999


Q ss_pred             hhCCCccEEEEcCCCCCC---CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCccc
Q 022103          103 SNFAALDILVNNAGVSFN---DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNI  179 (302)
Q Consensus       103 ~~~g~id~lv~~aG~~~~---~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~  179 (302)
                      +.++++|++|||||....   ++.+.+.++|++.+++|+.+++++++++.|+|.+.  .++||++||..+..+.+     
T Consensus        80 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~g~ii~~sS~~~~~~~~-----  152 (255)
T PRK05717         80 GQFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAH--NGAIVNLASTRARQSEP-----  152 (255)
T ss_pred             HHhCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc--CcEEEEEcchhhcCCCC-----
Confidence            999999999999997632   46678999999999999999999999999999765  48999999988765432     


Q ss_pred             ccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCC
Q 022103          180 KSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMT  259 (302)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~  259 (302)
                                                           .+.+|+++|++++.++++++.++.. +|+|++|+||+++|++.
T Consensus       153 -------------------------------------~~~~Y~~sKaa~~~~~~~la~~~~~-~i~v~~i~Pg~i~t~~~  194 (255)
T PRK05717        153 -------------------------------------DTEAYAASKGGLLALTHALAISLGP-EIRVNAVSPGWIDARDP  194 (255)
T ss_pred             -------------------------------------CCcchHHHHHHHHHHHHHHHHHhcC-CCEEEEEecccCcCCcc
Confidence                                                 2367999999999999999999876 49999999999999874


Q ss_pred             CCC----------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcccC
Q 022103          260 QGQ----------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVK  299 (302)
Q Consensus       260 ~~~----------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  299 (302)
                      ...                +..+|++++..+.+++. +...+++|+.+..++...+
T Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~-~~~~~~~g~~~~~~gg~~~  249 (255)
T PRK05717        195 SQRRAEPLSEADHAQHPAGRVGTVEDVAAMVAWLLS-RQAGFVTGQEFVVDGGMTR  249 (255)
T ss_pred             ccccchHHHHHHhhcCCCCCCcCHHHHHHHHHHHcC-chhcCccCcEEEECCCceE
Confidence            321                12478999999999986 4566789999998887543

>PRK05866 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-32  Score=252.97  Aligned_cols=217  Identities=24%  Similarity=0.290  Sum_probs=187.2

Q ss_pred             ccccccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHH
Q 022103           22 SSTKWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWF  101 (302)
Q Consensus        22 ~~~~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~  101 (302)
                      .+....+++|+++||||+||||+++|+.|+++|++|++++|+.+++++..+++.+.+.++.++.+|++|.+++.++++++
T Consensus        32 ~~~~~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~  111 (293)
T PRK05866         32 PRQPVDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADV  111 (293)
T ss_pred             CCCCcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHH
Confidence            33456688999999999999999999999999999999999999988888888766677889999999999999999999


Q ss_pred             HhhCCCccEEEEcCCCCCC-CCCC--CCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcc
Q 022103          102 KSNFAALDILVNNAGVSFN-DIYK--NTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPN  178 (302)
Q Consensus       102 ~~~~g~id~lv~~aG~~~~-~~~~--~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~  178 (302)
                      .+.++++|++|||||.... ++.+  .+.++++.++++|+.+++.++++++|.|.+. +.++||++||..+....     
T Consensus       112 ~~~~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~~~-----  185 (293)
T PRK05866        112 EKRIGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLER-GDGHIINVATWGVLSEA-----  185 (293)
T ss_pred             HHHcCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcEEEEECChhhcCCC-----
Confidence            9999999999999998644 3333  2467889999999999999999999999876 56899999996543211     


Q ss_pred             cccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCC
Q 022103          179 IKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSM  258 (302)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~  258 (302)
                                                          .+++..|++||+|+++|+++++.|+.++||+|++|+||+++|+|
T Consensus       186 ------------------------------------~p~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~  229 (293)
T PRK05866        186 ------------------------------------SPLFSVYNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPM  229 (293)
T ss_pred             ------------------------------------CCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCcc
Confidence                                                12347899999999999999999999999999999999999999


Q ss_pred             CCCC------CCCCHHHHHHHHHHHhhc
Q 022103          259 TQGQ------GSHTADEAADVGARLLLL  280 (302)
Q Consensus       259 ~~~~------~~~~~~~~a~~~~~l~~~  280 (302)
                      ....      ...+|+++|..+...+..
T Consensus       230 ~~~~~~~~~~~~~~pe~vA~~~~~~~~~  257 (293)
T PRK05866        230 IAPTKAYDGLPALTADEAAEWMVTAART  257 (293)
T ss_pred             ccccccccCCCCCCHHHHHHHHHHHHhc
Confidence            7643      236899999999988864

>PRK12939 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.4e-32  Score=243.27  Aligned_cols=228  Identities=29%  Similarity=0.372  Sum_probs=200.8

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      .+++|+++|||++||||+++++.|+++|++|++++|+.++++...+.+...+.++.++.+|++++++++++++++.+.++
T Consensus         4 ~~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   83 (250)
T PRK12939          4 NLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALG   83 (250)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            36789999999999999999999999999999999999888888888876667889999999999999999999999999


Q ss_pred             CccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccch
Q 022103          107 ALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILED  185 (302)
Q Consensus       107 ~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~  185 (302)
                      ++|++|||+|.... .+.+.+.++++..+++|+.+++.+++.+.+.|.++ ..++||++||..+..+.+.          
T Consensus        84 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~~~~~----------  152 (250)
T PRK12939         84 GLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDS-GRGRIVNLASDTALWGAPK----------  152 (250)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCeEEEEECchhhccCCCC----------
Confidence            99999999997654 46778999999999999999999999999998876 4689999999877654322          


Q ss_pred             hhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCCC--
Q 022103          186 EELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQG--  263 (302)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~~--  263 (302)
                                                      +..|+++|++++.+++.++.++.+++|+|+.|+||+++|++.+...  
T Consensus       153 --------------------------------~~~y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~  200 (250)
T PRK12939        153 --------------------------------LGAYVASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEATAYVPAD  200 (250)
T ss_pred             --------------------------------cchHHHHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccccCCh
Confidence                                            3679999999999999999999889999999999999999865321  


Q ss_pred             --------------CCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          264 --------------SHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       264 --------------~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                                    ...++++|..+..++. +....++|+++..++.+.
T Consensus       201 ~~~~~~~~~~~~~~~~~~~dva~~~~~l~~-~~~~~~~G~~i~~~gg~~  248 (250)
T PRK12939        201 ERHAYYLKGRALERLQVPDDVAGAVLFLLS-DAARFVTGQLLPVNGGFV  248 (250)
T ss_pred             HHHHHHHhcCCCCCCCCHHHHHHHHHHHhC-ccccCccCcEEEECCCcc
Confidence                          2678999999999986 566689999999998753

>PRK07890 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-32  Score=246.29  Aligned_cols=226  Identities=27%  Similarity=0.272  Sum_probs=196.0

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      .+++|+++||||++|||+++|+.|+++|++|++++|+.++.+...+++...+.++.++.+|++|+++++++++++.+.++
T Consensus         2 ~l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   81 (258)
T PRK07890          2 LLKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFG   81 (258)
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcC
Confidence            36789999999999999999999999999999999999888888888876666789999999999999999999999999


Q ss_pred             CccEEEEcCCCCC--CCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccc
Q 022103          107 ALDILVNNAGVSF--NDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILE  184 (302)
Q Consensus       107 ~id~lv~~aG~~~--~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~  184 (302)
                      ++|++|||||...  .++.+.+.+++++++++|+.+++.+++++.+.|.+.  .++||++||..+..+.           
T Consensus        82 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~~ii~~sS~~~~~~~-----------  148 (258)
T PRK07890         82 RVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAES--GGSIVMINSMVLRHSQ-----------  148 (258)
T ss_pred             CccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC--CCEEEEEechhhccCC-----------
Confidence            9999999999753  356678899999999999999999999999999775  4799999998765432           


Q ss_pred             hhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC--
Q 022103          185 DEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ--  262 (302)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~--  262 (302)
                                                     +++..|+++|++++.++++++.+++++||+|++|+||++.|++....  
T Consensus       149 -------------------------------~~~~~Y~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~  197 (258)
T PRK07890        149 -------------------------------PKYGAYKMAKGALLAASQSLATELGPQGIRVNSVAPGYIWGDPLKGYFR  197 (258)
T ss_pred             -------------------------------CCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHHHhh
Confidence                                           22467999999999999999999998999999999999999864310  


Q ss_pred             ------------------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          263 ------------------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       263 ------------------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                                              ....+++++..+.+++. +....++|+.+..++..
T Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~l~~-~~~~~~~G~~i~~~gg~  255 (258)
T PRK07890        198 HQAGKYGVTVEQIYAETAANSDLKRLPTDDEVASAVLFLAS-DLARAITGQTLDVNCGE  255 (258)
T ss_pred             hcccccCCCHHHHHHHHhhcCCccccCCHHHHHHHHHHHcC-HhhhCccCcEEEeCCcc
Confidence                                    12468999999999987 45567999998888764

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=100.00  E-value=9.6e-33  Score=248.13  Aligned_cols=220  Identities=25%  Similarity=0.304  Sum_probs=185.6

Q ss_pred             EEEEeCCCchHHHHHHHHHHH----cCCEEEEEecChhhHHHHHHHHhhC--CCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           32 IAIVTGANKGIGFALVKRLAE----LGLTVILTARDVERGQRAVESLSEK--GLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        32 ~vlItGas~gIG~ala~~l~~----~G~~V~l~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      +++||||++|||+++|++|++    .|++|++++|+.++++...+++...  +.++.++.+|+++.++++++++++.+.+
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   81 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELP   81 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhcc
Confidence            689999999999999999997    7999999999999988888888652  4467889999999999999999998877


Q ss_pred             CCc----cEEEEcCCCCCC---CCCC-CCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCC-CCCcEEEecCCCcccccccC
Q 022103          106 AAL----DILVNNAGVSFN---DIYK-NTVEHAETVIRTNFYGAKLLTESLLPLFRRSP-SKSRILNISSRLGTLSKVRN  176 (302)
Q Consensus       106 g~i----d~lv~~aG~~~~---~~~~-~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~-~~~~iv~vsS~~~~~~~~~~  176 (302)
                      +.+    |+||||||....   ...+ .+.+++++.+++|+.+++++++.++|.|.++. ..++||++||..+..+.+  
T Consensus        82 g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~~~--  159 (256)
T TIGR01500        82 RPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQPFK--  159 (256)
T ss_pred             ccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCCCCC--
Confidence            643    699999997532   2232 35789999999999999999999999998652 357999999988764422  


Q ss_pred             cccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccC
Q 022103          177 PNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQT  256 (302)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T  256 (302)
                                                              ++.+|++||+|+++|+++|+.|+.+.||+|+.|+||+|+|
T Consensus       160 ----------------------------------------~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T  199 (256)
T TIGR01500       160 ----------------------------------------GWALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDT  199 (256)
T ss_pred             ----------------------------------------CchHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccc
Confidence                                                    2478999999999999999999999999999999999999


Q ss_pred             CCCCCC--------------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCC
Q 022103          257 SMTQGQ--------------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLD  295 (302)
Q Consensus       257 ~~~~~~--------------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~  295 (302)
                      +|.+..                    ...+|+++|..+++++.  ....++|+++.+.+
T Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~eva~~~~~l~~--~~~~~~G~~~~~~~  256 (256)
T TIGR01500       200 DMQQQVREESVDPDMRKGLQELKAKGKLVDPKVSAQKLLSLLE--KDKFKSGAHVDYYD  256 (256)
T ss_pred             hHHHHHHHhcCChhHHHHHHHHHhcCCCCCHHHHHHHHHHHHh--cCCcCCcceeeccC
Confidence            986421                    23689999999999986  45678999887653

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK07825 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.6e-32  Score=247.27  Aligned_cols=208  Identities=25%  Similarity=0.353  Sum_probs=185.1

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      ++++++++||||+||||+++++.|+++|++|++++|+.+++++..+++.    .+.++.+|++|++++.++++++.+.++
T Consensus         2 ~~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~~~   77 (273)
T PRK07825          2 DLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELG----LVVGGPLDVTDPASFAAFLDAVEADLG   77 (273)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc----cceEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4678999999999999999999999999999999999988877766653    477899999999999999999999999


Q ss_pred             CccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccch
Q 022103          107 ALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILED  185 (302)
Q Consensus       107 ~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~  185 (302)
                      ++|++|||||.... .+.+.+.+.+++++++|+.+++.+++.++|.|.++ +.++||++||..+..+.+           
T Consensus        78 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~~-----------  145 (273)
T PRK07825         78 PIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPR-GRGHVVNVASLAGKIPVP-----------  145 (273)
T ss_pred             CCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCEEEEEcCccccCCCC-----------
Confidence            99999999998654 56778999999999999999999999999999887 578999999998875532           


Q ss_pred             hhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC---
Q 022103          186 EELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ---  262 (302)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~---  262 (302)
                                                     ++..|++||+++++|+++++.|+.+.||+|++|+||++.|++....   
T Consensus       146 -------------------------------~~~~Y~asKaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~~~~~~~  194 (273)
T PRK07825        146 -------------------------------GMATYCASKHAVVGFTDAARLELRGTGVHVSVVLPSFVNTELIAGTGGA  194 (273)
T ss_pred             -------------------------------CCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcCcchhhcccccc
Confidence                                           2478999999999999999999999999999999999999987643   


Q ss_pred             ---CCCCHHHHHHHHHHHhhcC
Q 022103          263 ---GSHTADEAADVGARLLLLH  281 (302)
Q Consensus       263 ---~~~~~~~~a~~~~~l~~~~  281 (302)
                         ...+++++|..++.++..+
T Consensus       195 ~~~~~~~~~~va~~~~~~l~~~  216 (273)
T PRK07825        195 KGFKNVEPEDVAAAIVGTVAKP  216 (273)
T ss_pred             cCCCCCCHHHHHHHHHHHHhCC
Confidence               3478999999999998743

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=3.6e-32  Score=244.34  Aligned_cols=231  Identities=27%  Similarity=0.348  Sum_probs=198.9

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      ++++|+++||||+|+||.++|++|+++|++|++++|+.++++...+.+...+.++.++.+|++|+++++++++++.+.++
T Consensus         9 ~~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~   88 (259)
T PRK08213          9 DLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFG   88 (259)
T ss_pred             CcCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            46789999999999999999999999999999999999888888888876666788999999999999999999999889


Q ss_pred             CccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhh-hhcCCCCCcEEEecCCCcccccccCcccccccc
Q 022103          107 ALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPL-FRRSPSKSRILNISSRLGTLSKVRNPNIKSILE  184 (302)
Q Consensus       107 ~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~-l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~  184 (302)
                      ++|++|||||.... +..+.+.+.|++++++|+.+++.+++++.+. |.++ ..++||++||..+..+.+..        
T Consensus        89 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~-~~~~~v~~sS~~~~~~~~~~--------  159 (259)
T PRK08213         89 HVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPR-GYGRIINVASVAGLGGNPPE--------  159 (259)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhc-CCeEEEEECChhhccCCCcc--------
Confidence            99999999997543 4567888999999999999999999999998 6655 56899999998776543221        


Q ss_pred             hhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC--
Q 022103          185 DEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ--  262 (302)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~--  262 (302)
                                                    ..++.+|+++|++++.++++++.++.++||+|++|+||+++|++....  
T Consensus       160 ------------------------------~~~~~~Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~~~~~  209 (259)
T PRK08213        160 ------------------------------VMDTIAYNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTRGTLE  209 (259)
T ss_pred             ------------------------------ccCcchHHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchhhhhH
Confidence                                          122478999999999999999999999999999999999999875432  


Q ss_pred             -------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          263 -------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       263 -------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                                   ....+++++..+.+++. +....++|+++..++..
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~va~~~~~l~~-~~~~~~~G~~~~~~~~~  256 (259)
T PRK08213        210 RLGEDLLAHTPLGRLGDDEDLKGAALLLAS-DASKHITGQILAVDGGV  256 (259)
T ss_pred             HHHHHHHhcCCCCCCcCHHHHHHHHHHHhC-ccccCccCCEEEECCCe
Confidence                         12468999999999986 56778999999988764

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=3.2e-32  Score=243.02  Aligned_cols=225  Identities=24%  Similarity=0.266  Sum_probs=188.3

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEec-ChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTAR-DVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r-~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      .+++|+++||||++|||+++|+.|+++|++|+++.+ +.++.+....++   +.++.++.+|++++++++++++++.+.+
T Consensus         2 ~l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (253)
T PRK08642          2 QISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADEL---GDRAIALQADVTDREQVQAMFATATEHF   78 (253)
T ss_pred             CCCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            356799999999999999999999999999988755 444545444443   3468889999999999999999999888


Q ss_pred             CC-ccEEEEcCCCCC-------CCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCc
Q 022103          106 AA-LDILVNNAGVSF-------NDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNP  177 (302)
Q Consensus       106 g~-id~lv~~aG~~~-------~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~  177 (302)
                      +. +|++|||||...       .++.+.+.+++++.+++|+.+++.+++++++.|.++ ..++||+++|..+..+.    
T Consensus        79 g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~iss~~~~~~~----  153 (253)
T PRK08642         79 GKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQ-GFGRIINIGTNLFQNPV----  153 (253)
T ss_pred             CCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhc-CCeEEEEECCccccCCC----
Confidence            87 999999998631       246778999999999999999999999999999766 46899999996553221    


Q ss_pred             ccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCC
Q 022103          178 NIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTS  257 (302)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~  257 (302)
                                                            .++.+|+++|++++.+++++++++.++||+||+|+||+++|+
T Consensus       154 --------------------------------------~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~  195 (253)
T PRK08642        154 --------------------------------------VPYHDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTT  195 (253)
T ss_pred             --------------------------------------CCccchHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCc
Confidence                                                  123679999999999999999999999999999999999997


Q ss_pred             CCCCC----------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          258 MTQGQ----------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       258 ~~~~~----------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                      +....                ...+|+++|..+.+|+. +...+++|..+..++.+.
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~-~~~~~~~G~~~~vdgg~~  251 (253)
T PRK08642        196 DASAATPDEVFDLIAATTPLRKVTTPQEFADAVLFFAS-PWARAVTGQNLVVDGGLV  251 (253)
T ss_pred             hhhccCCHHHHHHHHhcCCcCCCCCHHHHHHHHHHHcC-chhcCccCCEEEeCCCee
Confidence            54321                23689999999999997 667789999999998753

>PLN00015 protochlorophyllide reductase

Probab=100.00  E-value=1.6e-32  Score=253.79  Aligned_cols=255  Identities=24%  Similarity=0.316  Sum_probs=192.5

Q ss_pred             EEeCCCchHHHHHHHHHHHcC-CEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCccEEE
Q 022103           34 IVTGANKGIGFALVKRLAELG-LTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDILV  112 (302)
Q Consensus        34 lItGas~gIG~ala~~l~~~G-~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id~lv  112 (302)
                      +||||++|||+++|++|+++| ++|++++|+.++.+...+++...+.++.++.+|++|.++++++++++.+.++.+|+||
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lI   80 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLV   80 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence            699999999999999999999 9999999999888888887765555788899999999999999999998889999999


Q ss_pred             EcCCCCCC--CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCC-CCcEEEecCCCcccccccCcccccccchhhhc
Q 022103          113 NNAGVSFN--DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPS-KSRILNISSRLGTLSKVRNPNIKSILEDEELS  189 (302)
Q Consensus       113 ~~aG~~~~--~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~-~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~  189 (302)
                      ||||+...  ++.+.+.++|++++++|+.|++++++.++|.|.+++. .++||++||..+..+.....      .++..+
T Consensus        81 nnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~------~~~~~~  154 (308)
T PLN00015         81 CNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGN------VPPKAN  154 (308)
T ss_pred             ECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEecccccccccccc------CCCccc
Confidence            99998533  4567899999999999999999999999999987621 58999999988753211000      000000


Q ss_pred             HHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccC-CCcEEEEeecCcc-cCCCCCCC-----
Q 022103          190 EEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEG-EGISVNSYCPGFT-QTSMTQGQ-----  262 (302)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~-~gI~V~~v~PG~v-~T~~~~~~-----  262 (302)
                      ......+...+ .......+.+...+.++.+|++||+|+..+++.+++++.+ .||+|++|+||+| +|+|.+..     
T Consensus       155 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~~~~~  233 (308)
T PLN00015        155 LGDLRGLAGGL-NGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFREHIPLFR  233 (308)
T ss_pred             hhhhhhhhccc-CCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCccccccccHHHH
Confidence            00000000000 0000000111122345678999999999999999999865 6999999999999 79986542     


Q ss_pred             ------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCc
Q 022103          263 ------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDP  296 (302)
Q Consensus       263 ------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  296 (302)
                                  +..+|++.|..+++++. +.....+|+||.+++.
T Consensus       234 ~~~~~~~~~~~~~~~~pe~~a~~~~~l~~-~~~~~~~G~~~~~~g~  278 (308)
T PLN00015        234 LLFPPFQKYITKGYVSEEEAGKRLAQVVS-DPSLTKSGVYWSWNGG  278 (308)
T ss_pred             HHHHHHHHHHhcccccHHHhhhhhhhhcc-ccccCCCccccccCCc
Confidence                        23688999999999987 4445589999987664

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=3.2e-32  Score=244.44  Aligned_cols=227  Identities=25%  Similarity=0.287  Sum_probs=191.7

Q ss_pred             cccCcEEEEeCCC--chHHHHHHHHHHHcCCEEEEEecC-----------hhhHHHHHHHHhhCCCceeEEEeeCCCHHH
Q 022103           27 WSKETIAIVTGAN--KGIGFALVKRLAELGLTVILTARD-----------VERGQRAVESLSEKGLPVNFFQLDVSDPSS   93 (302)
Q Consensus        27 ~~~~k~vlItGas--~gIG~ala~~l~~~G~~V~l~~r~-----------~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~   93 (302)
                      .+++|+++||||+  +|||.++|++|+++|++|++++|+           ........+.+...+.++.++.+|++++++
T Consensus         2 ~l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   81 (256)
T PRK12748          2 PLMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYA   81 (256)
T ss_pred             CCCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHH
Confidence            4678999999999  499999999999999999999987           222222445555556678999999999999


Q ss_pred             HHHHHHHHHhhCCCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccc
Q 022103           94 IEAFVSWFKSNFAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLS  172 (302)
Q Consensus        94 ~~~~~~~~~~~~g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~  172 (302)
                      +.++++++.+.++++|+||||||.... ++.+.+.++++..+++|+.+++++++++.+.|.+. ..++||++||..+..+
T Consensus        82 ~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~~ss~~~~~~  160 (256)
T PRK12748         82 PNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGK-AGGRIINLTSGQSLGP  160 (256)
T ss_pred             HHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhc-CCeEEEEECCccccCC
Confidence            999999999999999999999997643 56778999999999999999999999999998765 5689999999876543


Q ss_pred             cccCcccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecC
Q 022103          173 KVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPG  252 (302)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG  252 (302)
                      .+                                          ++..|+++|+++++++++++.++...||+|++|+||
T Consensus       161 ~~------------------------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg  198 (256)
T PRK12748        161 MP------------------------------------------DELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPG  198 (256)
T ss_pred             CC------------------------------------------CchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeC
Confidence            21                                          246799999999999999999998899999999999


Q ss_pred             cccCCCCCCC------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          253 FTQTSMTQGQ------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       253 ~v~T~~~~~~------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                      .++|++....            ...+|+++|..+.+++. +....++|.++..++.+
T Consensus       199 ~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~-~~~~~~~g~~~~~d~g~  254 (256)
T PRK12748        199 PTDTGWITEELKHHLVPKFPQGRVGEPVDAARLIAFLVS-EEAKWITGQVIHSEGGF  254 (256)
T ss_pred             cccCCCCChhHHHhhhccCCCCCCcCHHHHHHHHHHHhC-cccccccCCEEEecCCc
Confidence            9999864421            23579999999999886 55667899999998764

>PRK07109 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-32  Score=256.80  Aligned_cols=213  Identities=22%  Similarity=0.189  Sum_probs=189.0

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      ..+++|+++||||++|||+++++.|+++|++|++++|+.+++++..+++.+.+.++.++.+|++|+++++++++++.+++
T Consensus         4 ~~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~   83 (334)
T PRK07109          4 KPIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEEL   83 (334)
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHC
Confidence            34778999999999999999999999999999999999999999988888778889999999999999999999999999


Q ss_pred             CCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccc
Q 022103          106 AALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILE  184 (302)
Q Consensus       106 g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~  184 (302)
                      +++|++|||||.... ++.+.+.++++.++++|+.+++++++++++.|.++ +.++||++||..+..+.+          
T Consensus        84 g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~-~~g~iV~isS~~~~~~~~----------  152 (334)
T PRK07109         84 GPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPR-DRGAIIQVGSALAYRSIP----------  152 (334)
T ss_pred             CCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEeCChhhccCCC----------
Confidence            999999999997643 57788999999999999999999999999999886 569999999998875432          


Q ss_pred             hhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccC--CCcEEEEeecCcccCCCCCCC
Q 022103          185 DEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEG--EGISVNSYCPGFTQTSMTQGQ  262 (302)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~--~gI~V~~v~PG~v~T~~~~~~  262 (302)
                                                      .+..|+++|+++++|+++++.|+..  .+|+|+.|+||.++|++....
T Consensus       153 --------------------------------~~~~Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~~~  200 (334)
T PRK07109        153 --------------------------------LQSAYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFDWA  200 (334)
T ss_pred             --------------------------------cchHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhhhh
Confidence                                            2367999999999999999999864  479999999999999975421


Q ss_pred             ------------CCCCHHHHHHHHHHHhhcC
Q 022103          263 ------------GSHTADEAADVGARLLLLH  281 (302)
Q Consensus       263 ------------~~~~~~~~a~~~~~l~~~~  281 (302)
                                  ...+|+++|..+++++..+
T Consensus       201 ~~~~~~~~~~~~~~~~pe~vA~~i~~~~~~~  231 (334)
T PRK07109        201 RSRLPVEPQPVPPIYQPEVVADAILYAAEHP  231 (334)
T ss_pred             hhhccccccCCCCCCCHHHHHHHHHHHHhCC
Confidence                        1258999999999998743

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=9.8e-33  Score=254.54  Aligned_cols=243  Identities=33%  Similarity=0.437  Sum_probs=202.6

Q ss_pred             ccccccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhC--CCceeEEEeeCCCHHHHHHHHH
Q 022103           22 SSTKWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEK--GLPVNFFQLDVSDPSSIEAFVS   99 (302)
Q Consensus        22 ~~~~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dlt~~~~~~~~~~   99 (302)
                      ....+++++++++|||+++|||+++|+.|+++|++|++..|+.++.++.++++++.  ..++.++++|+++.++++++++
T Consensus        27 ~~~~~~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~  106 (314)
T KOG1208|consen   27 VTHGIDLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAE  106 (314)
T ss_pred             eeccccCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHH
Confidence            34467889999999999999999999999999999999999999999999999863  3567889999999999999999


Q ss_pred             HHHhhCCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCccc
Q 022103          100 WFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNI  179 (302)
Q Consensus       100 ~~~~~~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~  179 (302)
                      ++.+.++++|++|||||++..+. ..+.|++|.++.+|++|+++|++.++|.|+++ .++|||+|||..+ .....   .
T Consensus       107 ~~~~~~~~ldvLInNAGV~~~~~-~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s-~~~RIV~vsS~~~-~~~~~---~  180 (314)
T KOG1208|consen  107 EFKKKEGPLDVLINNAGVMAPPF-SLTKDGLELTFATNYLGHFLLTELLLPLLKRS-APSRIVNVSSILG-GGKID---L  180 (314)
T ss_pred             HHHhcCCCccEEEeCcccccCCc-ccCccchhheehhhhHHHHHHHHHHHHHHhhC-CCCCEEEEcCccc-cCccc---h
Confidence            99999999999999999987764 77889999999999999999999999999988 4599999999887 11111   1


Q ss_pred             ccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCC-C
Q 022103          180 KSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTS-M  258 (302)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~-~  258 (302)
                            ++++...                   ...+....+|+.||.|+..+++.|++.+.. ||.++.++||.|.|+ +
T Consensus       181 ------~~l~~~~-------------------~~~~~~~~~Y~~SKla~~l~~~eL~k~l~~-~V~~~~~hPG~v~t~~l  234 (314)
T KOG1208|consen  181 ------KDLSGEK-------------------AKLYSSDAAYALSKLANVLLANELAKRLKK-GVTTYSVHPGVVKTTGL  234 (314)
T ss_pred             ------hhccchh-------------------ccCccchhHHHHhHHHHHHHHHHHHHHhhc-CceEEEECCCcccccce
Confidence                  1111110                   000122246999999999999999999877 999999999999999 5


Q ss_pred             CCCCC-------------CCCHHHHHHHHHHHhhcCCCCCCCcceeecCCc
Q 022103          259 TQGQG-------------SHTADEAADVGARLLLLHPQQLPTAKFYIGLDP  296 (302)
Q Consensus       259 ~~~~~-------------~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  296 (302)
                      .+...             ..++++.|+...+.+..|..+..+|.++.....
T Consensus       235 ~r~~~~~~~l~~~l~~~~~ks~~~ga~t~~~~a~~p~~~~~sg~y~~d~~~  285 (314)
T KOG1208|consen  235 SRVNLLLRLLAKKLSWPLTKSPEQGAATTCYAALSPELEGVSGKYFEDCAI  285 (314)
T ss_pred             ecchHHHHHHHHHHHHHhccCHHHHhhheehhccCccccCccccccccccc
Confidence            55111             147899999999999888889999999655544

>PRK07576 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.4e-32  Score=245.94  Aligned_cols=227  Identities=22%  Similarity=0.270  Sum_probs=196.0

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      +.+++|+++||||++|||.+++++|+++|++|++++|+.++++...+++.+.+.++.++.+|++++++++++++++...+
T Consensus         5 ~~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~   84 (264)
T PRK07576          5 FDFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEF   84 (264)
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            45789999999999999999999999999999999999988887777777666677889999999999999999999999


Q ss_pred             CCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccc
Q 022103          106 AALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILE  184 (302)
Q Consensus       106 g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~  184 (302)
                      +.+|++|||||.... ++.+.+.+++++.+++|+.+++++++++++.|.+.  .++||++||..+..+.           
T Consensus        85 ~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~--~g~iv~iss~~~~~~~-----------  151 (264)
T PRK07576         85 GPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRP--GASIIQISAPQAFVPM-----------  151 (264)
T ss_pred             CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC--CCEEEEECChhhccCC-----------
Confidence            999999999986543 56778899999999999999999999999998765  4899999998775432           


Q ss_pred             hhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCccc-CCCCCC--
Q 022103          185 DEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQ-TSMTQG--  261 (302)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~-T~~~~~--  261 (302)
                                                     +.+..|+++|++++.|+++++.++.++||+|+.|+||+++ |+....  
T Consensus       152 -------------------------------~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~~~~~  200 (264)
T PRK07576        152 -------------------------------PMQAHVCAAKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEGMARLA  200 (264)
T ss_pred             -------------------------------CCccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccccCcHHHhhcc
Confidence                                           2246799999999999999999999899999999999996 553211  


Q ss_pred             ---------------CCCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          262 ---------------QGSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       262 ---------------~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                                     .+...|+++|..+++++. ++..+++|.++..++..
T Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~-~~~~~~~G~~~~~~gg~  250 (264)
T PRK07576        201 PSPELQAAVAQSVPLKRNGTKQDIANAALFLAS-DMASYITGVVLPVDGGW  250 (264)
T ss_pred             cCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcC-hhhcCccCCEEEECCCc
Confidence                           113568999999999997 56678999999888874

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=100.00  E-value=2.2e-32  Score=242.47  Aligned_cols=221  Identities=24%  Similarity=0.294  Sum_probs=191.1

Q ss_pred             EEEeCCCchHHHHHHHHHHHcCCEEEEEecC-hhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCccEE
Q 022103           33 AIVTGANKGIGFALVKRLAELGLTVILTARD-VERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDIL  111 (302)
Q Consensus        33 vlItGas~gIG~ala~~l~~~G~~V~l~~r~-~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id~l  111 (302)
                      ++||||++|||+++|+.|+++|++|++++|+ .++++...+++.+.+.++.++.+|+++.+++.++++++.+.++.+|++
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~l   80 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYGV   80 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            5899999999999999999999999998875 456677777777767789999999999999999999999999999999


Q ss_pred             EEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHh-hhhhcCCCCCcEEEecCCCcccccccCcccccccchhhhc
Q 022103          112 VNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLL-PLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELS  189 (302)
Q Consensus       112 v~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~-~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~  189 (302)
                      |||+|.... ++.+.+.++|+.++++|+.++++++++++ |.+.++ ..++||++||..+..+.+.              
T Consensus        81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~iv~vsS~~~~~~~~~--------------  145 (239)
T TIGR01831        81 VLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRAR-QGGRIITLASVSGVMGNRG--------------  145 (239)
T ss_pred             EECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhc-CCeEEEEEcchhhccCCCC--------------
Confidence            999998654 46778999999999999999999999875 444444 5689999999888755332              


Q ss_pred             HHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC-------
Q 022103          190 EEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ-------  262 (302)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~-------  262 (302)
                                                  +..|+++|++++.++++++.|+.++||+|++|+||+++|+|....       
T Consensus       146 ----------------------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~  197 (239)
T TIGR01831       146 ----------------------------QVNYSAAKAGLIGATKALAVELAKRKITVNCIAPGLIDTEMLAEVEHDLDEA  197 (239)
T ss_pred             ----------------------------CcchHHHHHHHHHHHHHHHHHHhHhCeEEEEEEEccCccccchhhhHHHHHH
Confidence                                        367999999999999999999998999999999999999997632       


Q ss_pred             -------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          263 -------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       263 -------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                             ...+|+++++.+.+|+. +...+++|.++..+|.+
T Consensus       198 ~~~~~~~~~~~~~~va~~~~~l~~-~~~~~~~g~~~~~~gg~  238 (239)
T TIGR01831       198 LKTVPMNRMGQPAEVASLAGFLMS-DGASYVTRQVISVNGGM  238 (239)
T ss_pred             HhcCCCCCCCCHHHHHHHHHHHcC-chhcCccCCEEEecCCc
Confidence                   12479999999999987 67788999999988875

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK06701 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.2e-32  Score=248.38  Aligned_cols=227  Identities=25%  Similarity=0.305  Sum_probs=195.5

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChh-hHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhh
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVE-RGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSN  104 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~-~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~  104 (302)
                      ..+++|+++||||++|||++++++|+++|++|++++|+.+ ..+...+.+...+.++.++.+|+++.++++++++++.+.
T Consensus        42 ~~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~  121 (290)
T PRK06701         42 GKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRE  121 (290)
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence            4577899999999999999999999999999999999863 455556666655667889999999999999999999999


Q ss_pred             CCCccEEEEcCCCCC--CCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccc
Q 022103          105 FAALDILVNNAGVSF--NDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSI  182 (302)
Q Consensus       105 ~g~id~lv~~aG~~~--~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~  182 (302)
                      ++.+|+||||||...  ..+.+.+.++|+.++++|+.+++.+++++++.|++   .++||++||..+..+.+.       
T Consensus       122 ~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~---~g~iV~isS~~~~~~~~~-------  191 (290)
T PRK06701        122 LGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQ---GSAIINTGSITGYEGNET-------  191 (290)
T ss_pred             cCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhh---CCeEEEEecccccCCCCC-------
Confidence            999999999999753  35677899999999999999999999999999854   379999999887654322       


Q ss_pred             cchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC
Q 022103          183 LEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ  262 (302)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~  262 (302)
                                                         +..|+++|+|++.++++++.++.++||+|++|+||+++|++....
T Consensus       192 -----------------------------------~~~Y~~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~~  236 (290)
T PRK06701        192 -----------------------------------LIDYSATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSD  236 (290)
T ss_pred             -----------------------------------cchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCcccccc
Confidence                                               367999999999999999999998999999999999999975421


Q ss_pred             ----------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          263 ----------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       263 ----------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                                      ....++++|..+.+|+. +...+++|.++..++.+.
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ll~-~~~~~~~G~~i~idgg~~  287 (290)
T PRK06701        237 FDEEKVSQFGSNTPMQRPGQPEELAPAYVFLAS-PDSSYITGQMLHVNGGVI  287 (290)
T ss_pred             cCHHHHHHHHhcCCcCCCcCHHHHHHHHHHHcC-cccCCccCcEEEeCCCcc
Confidence                            12568999999999987 556778999999998754

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=4.3e-32  Score=241.75  Aligned_cols=226  Identities=26%  Similarity=0.293  Sum_probs=197.3

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      .+++++++||||+|+||.++++.|+++|++|++++|+.++++...+.+.. +.++.++.+|++|.++++.+++++.+.++
T Consensus         2 ~~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (251)
T PRK07231          2 RLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILA-GGRAIAVAADVSDEADVEAAVAAALERFG   80 (251)
T ss_pred             CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc-CCeEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            46789999999999999999999999999999999999888887777765 55788999999999999999999988899


Q ss_pred             CccEEEEcCCCCCC--CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccc
Q 022103          107 ALDILVNNAGVSFN--DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILE  184 (302)
Q Consensus       107 ~id~lv~~aG~~~~--~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~  184 (302)
                      ++|+||||+|....  ++.+.+.+++++.+++|+.+++.+++.+++.|.++ ..++||++||..+..+.+          
T Consensus        81 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~~sS~~~~~~~~----------  149 (251)
T PRK07231         81 SVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGE-GGGAIVNVASTAGLRPRP----------  149 (251)
T ss_pred             CCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-CCcEEEEEcChhhcCCCC----------
Confidence            99999999997532  46778999999999999999999999999999876 568999999987764432          


Q ss_pred             hhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCCC-
Q 022103          185 DEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQG-  263 (302)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~~-  263 (302)
                                                      ++..|+.+|++++.+++.++.++.+.||+|++|+||+++|++..... 
T Consensus       150 --------------------------------~~~~y~~sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~  197 (251)
T PRK07231        150 --------------------------------GLGWYNASKGAVITLTKALAAELGPDKIRVNAVAPVVVETGLLEAFMG  197 (251)
T ss_pred             --------------------------------CchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhhhc
Confidence                                            23679999999999999999999888999999999999999855421 


Q ss_pred             ------------------CCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          264 ------------------SHTADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       264 ------------------~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                                        ...++++|..+++++. +....++|.++..+|..
T Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~-~~~~~~~g~~~~~~gg~  248 (251)
T PRK07231        198 EPTPENRAKFLATIPLGRLGTPEDIANAALFLAS-DEASWITGVTLVVDGGR  248 (251)
T ss_pred             ccChHHHHHHhcCCCCCCCcCHHHHHHHHHHHhC-ccccCCCCCeEEECCCc
Confidence                              2578999999999986 56667899999888764

>PRK06196 oxidoreductase; Provisional

Probab=100.00  E-value=4.7e-32  Score=251.16  Aligned_cols=232  Identities=25%  Similarity=0.278  Sum_probs=188.9

Q ss_pred             cccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhh
Q 022103           25 KWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSN  104 (302)
Q Consensus        25 ~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~  104 (302)
                      ...+++|+++||||++|||+++|++|+++|++|++++|+.++.++..+++.    .+.++.+|++|.++++++++++.+.
T Consensus        21 ~~~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~----~v~~~~~Dl~d~~~v~~~~~~~~~~   96 (315)
T PRK06196         21 GHDLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGID----GVEVVMLDLADLESVRAFAERFLDS   96 (315)
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh----hCeEEEccCCCHHHHHHHHHHHHhc
Confidence            345789999999999999999999999999999999999988877766664    3788999999999999999999998


Q ss_pred             CCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccc
Q 022103          105 FAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILE  184 (302)
Q Consensus       105 ~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~  184 (302)
                      ++++|+||||||....+ .+.+.++|+..+++|+.+++++++.++|.|.++ +.++||++||..+..+.....+      
T Consensus        97 ~~~iD~li~nAg~~~~~-~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~-~~~~iV~vSS~~~~~~~~~~~~------  168 (315)
T PRK06196         97 GRRIDILINNAGVMACP-ETRVGDGWEAQFATNHLGHFALVNLLWPALAAG-AGARVVALSSAGHRRSPIRWDD------  168 (315)
T ss_pred             CCCCCEEEECCCCCCCC-CccCCccHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCeEEEECCHHhccCCCCccc------
Confidence            99999999999976443 456778999999999999999999999999876 4689999999765432111100      


Q ss_pred             hhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC--
Q 022103          185 DEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ--  262 (302)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~--  262 (302)
                                            ..+  ...++.+..|++||++++.+++.+++++.++||+|++|+||+++|++.+..  
T Consensus       169 ----------------------~~~--~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~~~~  224 (315)
T PRK06196        169 ----------------------PHF--TRGYDKWLAYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHLPR  224 (315)
T ss_pred             ----------------------cCc--cCCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccccCCh
Confidence                                  000  011233578999999999999999999998999999999999999986532  


Q ss_pred             ------------------CCCCHHHHHHHHHHHhhcCCCCCCCcceee
Q 022103          263 ------------------GSHTADEAADVGARLLLLHPQQLPTAKFYI  292 (302)
Q Consensus       263 ------------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~  292 (302)
                                        ...+|++.|..+++++..+.....+|.++.
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~g~~~~  272 (315)
T PRK06196        225 EEQVALGWVDEHGNPIDPGFKTPAQGAATQVWAATSPQLAGMGGLYCE  272 (315)
T ss_pred             hhhhhhhhhhhhhhhhhhhcCCHhHHHHHHHHHhcCCccCCCCCeEeC
Confidence                              134689999999999975555555666553

>PRK06483 dihydromonapterin reductase; Provisional

Probab=100.00  E-value=5.6e-32  Score=239.84  Aligned_cols=218  Identities=22%  Similarity=0.234  Sum_probs=182.5

Q ss_pred             CcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCcc
Q 022103           30 ETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALD  109 (302)
Q Consensus        30 ~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id  109 (302)
                      +|+++||||++|||+++|++|+++|++|++++|+.++..   +.+.+.+  +.++.+|+++.++++++++++.+.++++|
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~---~~~~~~~--~~~~~~D~~~~~~~~~~~~~~~~~~~~id   76 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAI---DGLRQAG--AQCIQADFSTNAGIMAFIDELKQHTDGLR   76 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHH---HHHHHcC--CEEEEcCCCCHHHHHHHHHHHHhhCCCcc
Confidence            579999999999999999999999999999999876543   3333322  67889999999999999999999999999


Q ss_pred             EEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCC-CCCcEEEecCCCcccccccCcccccccchhh
Q 022103          110 ILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSP-SKSRILNISSRLGTLSKVRNPNIKSILEDEE  187 (302)
Q Consensus       110 ~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~-~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~  187 (302)
                      ++|||||.... ...+.+.++|++++++|+.+++.+++.+++.|.+.+ ..++||++||..+..+.              
T Consensus        77 ~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~--------------  142 (236)
T PRK06483         77 AIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKGS--------------  142 (236)
T ss_pred             EEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccCC--------------
Confidence            99999997533 356678999999999999999999999999998762 15799999997765432              


Q ss_pred             hcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC-----
Q 022103          188 LSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ-----  262 (302)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~-----  262 (302)
                                                  +.+.+|++||+++++|+++++.|+++ +||||+|+||++.|+.....     
T Consensus       143 ----------------------------~~~~~Y~asKaal~~l~~~~a~e~~~-~irvn~v~Pg~~~~~~~~~~~~~~~  193 (236)
T PRK06483        143 ----------------------------DKHIAYAASKAALDNMTLSFAAKLAP-EVKVNSIAPALILFNEGDDAAYRQK  193 (236)
T ss_pred             ----------------------------CCCccHHHHHHHHHHHHHHHHHHHCC-CcEEEEEccCceecCCCCCHHHHHH
Confidence                                        22478999999999999999999987 59999999999987643210     


Q ss_pred             --------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          263 --------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       263 --------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                              ....|++++..+.+|+.   ..+++|..+..+|...
T Consensus       194 ~~~~~~~~~~~~~~~va~~~~~l~~---~~~~~G~~i~vdgg~~  234 (236)
T PRK06483        194 ALAKSLLKIEPGEEEIIDLVDYLLT---SCYVTGRSLPVDGGRH  234 (236)
T ss_pred             HhccCccccCCCHHHHHHHHHHHhc---CCCcCCcEEEeCcccc
Confidence                    12579999999999985   4679999999998754

>PRK09186 flagellin modification protein A; Provisional

Probab=100.00  E-value=7.9e-32  Score=241.12  Aligned_cols=237  Identities=24%  Similarity=0.279  Sum_probs=194.9

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhC--CCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEK--GLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      +++|+++||||++|||+++|+.|+++|++|++++|+.+++++..+.+...  +..+.++.+|++|++++.++++++.+.+
T Consensus         2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~   81 (256)
T PRK09186          2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKY   81 (256)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence            46899999999999999999999999999999999998888888877532  2345677999999999999999999999


Q ss_pred             CCccEEEEcCCCCC----CCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCccccc
Q 022103          106 AALDILVNNAGVSF----NDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKS  181 (302)
Q Consensus       106 g~id~lv~~aG~~~----~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~  181 (302)
                      +++|++|||||...    ..+.+.+.+.++..+++|+.+++.+++++++.|.++ +.++||++||..+..+.... .   
T Consensus        82 ~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~~sS~~~~~~~~~~-~---  156 (256)
T PRK09186         82 GKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQ-GGGNLVNISSIYGVVAPKFE-I---  156 (256)
T ss_pred             CCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhc-CCceEEEEechhhhccccch-h---
Confidence            99999999998542    246788999999999999999999999999999876 56899999998775321100 0   


Q ss_pred             ccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCC
Q 022103          182 ILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG  261 (302)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~  261 (302)
                                                 + ....+.....|++||+++++++++++.|+.++||+|+.|+||.+.++....
T Consensus       157 ---------------------------~-~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~~~  208 (256)
T PRK09186        157 ---------------------------Y-EGTSMTSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQPEA  208 (256)
T ss_pred             ---------------------------c-cccccCCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCCHH
Confidence                                       0 000011124699999999999999999999999999999999998765221


Q ss_pred             -----------CCCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          262 -----------QGSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       262 -----------~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                                 ....+++++|..+.+++. +...+++|.++..++.+.
T Consensus       209 ~~~~~~~~~~~~~~~~~~dva~~~~~l~~-~~~~~~~g~~~~~~~g~~  255 (256)
T PRK09186        209 FLNAYKKCCNGKGMLDPDDICGTLVFLLS-DQSKYITGQNIIVDDGFS  255 (256)
T ss_pred             HHHHHHhcCCccCCCCHHHhhhhHhheec-cccccccCceEEecCCcc
Confidence                       234789999999999987 556789999999998753

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=100.00  E-value=2e-32  Score=246.90  Aligned_cols=219  Identities=27%  Similarity=0.287  Sum_probs=188.0

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      ++++|+++||||++|||+++++.|+++|++|++++|+.++.+         ..++.++.+|++|+++++++++++.+.++
T Consensus         6 ~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~---------~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   76 (266)
T PRK06171          6 NLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ---------HENYQFVPTDVSSAEEVNHTVAEIIEKFG   76 (266)
T ss_pred             cCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc---------cCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            578999999999999999999999999999999999875532         23678899999999999999999999999


Q ss_pred             CccEEEEcCCCCCC----------CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccC
Q 022103          107 ALDILVNNAGVSFN----------DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRN  176 (302)
Q Consensus       107 ~id~lv~~aG~~~~----------~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~  176 (302)
                      ++|++|||||....          ++.+.+.++|+.++++|+.+++++++++.++|.++ ..++||++||..+..+.+  
T Consensus        77 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~~~~--  153 (266)
T PRK06171         77 RIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQ-HDGVIVNMSSEAGLEGSE--  153 (266)
T ss_pred             CCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhc-CCcEEEEEccccccCCCC--
Confidence            99999999997532          13467899999999999999999999999999876 468999999988765432  


Q ss_pred             cccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCccc-
Q 022103          177 PNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQ-  255 (302)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~-  255 (302)
                                                              ++..|+++|++++.++++++.|++++||+||+|+||+++ 
T Consensus       154 ----------------------------------------~~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~~  193 (266)
T PRK06171        154 ----------------------------------------GQSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILEA  193 (266)
T ss_pred             ----------------------------------------CCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccccc
Confidence                                                    247799999999999999999999999999999999996 


Q ss_pred             CCCCCC-----------------------------CCCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          256 TSMTQG-----------------------------QGSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       256 T~~~~~-----------------------------~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                      |++...                             .+...|+|+|..+.+|++ +...+++|+.+..++...
T Consensus       194 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~eva~~~~fl~s-~~~~~itG~~i~vdgg~~  264 (266)
T PRK06171        194 TGLRTPEYEEALAYTRGITVEQLRAGYTKTSTIPLGRSGKLSEVADLVCYLLS-DRASYITGVTTNIAGGKT  264 (266)
T ss_pred             CCCcChhhhhhhccccCCCHHHHHhhhcccccccCCCCCCHHHhhhheeeeec-cccccceeeEEEecCccc
Confidence            655320                             012468999999999987 667889999999998754

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=8.6e-32  Score=239.99  Aligned_cols=224  Identities=26%  Similarity=0.314  Sum_probs=191.1

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHcCCEEEEEe-cChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCcc
Q 022103           31 TIAIVTGANKGIGFALVKRLAELGLTVILTA-RDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALD  109 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~G~~V~l~~-r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id  109 (302)
                      |+++||||++|||.++++.|+++|++|+++. |+.++++...+++...+.++.++.+|+++.++++++++++.+.++++|
T Consensus         3 k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   82 (248)
T PRK06947          3 KVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRLD   82 (248)
T ss_pred             cEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCCC
Confidence            6899999999999999999999999988764 666777777777776667889999999999999999999998889999


Q ss_pred             EEEEcCCCCCC--CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCC--CCCcEEEecCCCcccccccCcccccccch
Q 022103          110 ILVNNAGVSFN--DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSP--SKSRILNISSRLGTLSKVRNPNIKSILED  185 (302)
Q Consensus       110 ~lv~~aG~~~~--~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~--~~~~iv~vsS~~~~~~~~~~~~~~~~~~~  185 (302)
                      ++|||||....  .+.+.+.++++..+++|+.+++.+++++++.+..++  +.++||++||..+..+.+           
T Consensus        83 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~-----------  151 (248)
T PRK06947         83 ALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSP-----------  151 (248)
T ss_pred             EEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCC-----------
Confidence            99999997643  467789999999999999999999999999887542  247899999988765432           


Q ss_pred             hhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC---
Q 022103          186 EELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ---  262 (302)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~---  262 (302)
                                                    ..+.+|++||++++.++++++.++.+.||+|++|+||+++|++....   
T Consensus       152 ------------------------------~~~~~Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~  201 (248)
T PRK06947        152 ------------------------------NEYVDYAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHASGGQP  201 (248)
T ss_pred             ------------------------------CCCcccHhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCcccccccccCCH
Confidence                                          12357999999999999999999988899999999999999985421   


Q ss_pred             -------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCc
Q 022103          263 -------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDP  296 (302)
Q Consensus       263 -------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  296 (302)
                                   ...++++++..+++++. .+..+++|+++..++.
T Consensus       202 ~~~~~~~~~~~~~~~~~~e~va~~~~~l~~-~~~~~~~G~~~~~~gg  247 (248)
T PRK06947        202 GRAARLGAQTPLGRAGEADEVAETIVWLLS-DAASYVTGALLDVGGG  247 (248)
T ss_pred             HHHHHHhhcCCCCCCcCHHHHHHHHHHHcC-ccccCcCCceEeeCCC
Confidence                         12578999999999987 5667899999988764

>PRK05855 short chain dehydrogenase; Validated

Probab=100.00  E-value=3.5e-32  Score=269.71  Aligned_cols=213  Identities=24%  Similarity=0.358  Sum_probs=190.7

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      ..+++++++||||+||||+++|++|+++|++|++++|+.+++++..+.+.+.+.++.++.+|++|.+++.++++++.+.+
T Consensus       311 ~~~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  390 (582)
T PRK05855        311 GPFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEH  390 (582)
T ss_pred             ccCCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhc
Confidence            34567899999999999999999999999999999999999999888888777788999999999999999999999999


Q ss_pred             CCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccc
Q 022103          106 AALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILE  184 (302)
Q Consensus       106 g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~  184 (302)
                      |++|+||||||.... .+.+.+.++++.++++|+.|+++++++++|.|.+++..|+||++||.++..+.+          
T Consensus       391 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~----------  460 (582)
T PRK05855        391 GVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSR----------  460 (582)
T ss_pred             CCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCC----------
Confidence            999999999998654 567889999999999999999999999999998874468999999998875432          


Q ss_pred             hhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCCC-
Q 022103          185 DEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQG-  263 (302)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~~-  263 (302)
                                                      ++.+|++||+++++++++|+.|+.++||+|++|+||+|+|+|.+... 
T Consensus       461 --------------------------------~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~  508 (582)
T PRK05855        461 --------------------------------SLPAYATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDTNIVATTRF  508 (582)
T ss_pred             --------------------------------CCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCcccchhcccc
Confidence                                            24789999999999999999999999999999999999999866431 


Q ss_pred             ----------------------CCCHHHHHHHHHHHhhc
Q 022103          264 ----------------------SHTADEAADVGARLLLL  280 (302)
Q Consensus       264 ----------------------~~~~~~~a~~~~~l~~~  280 (302)
                                            ..+|+++|..+++.+..
T Consensus       509 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~va~~~~~~~~~  547 (582)
T PRK05855        509 AGADAEDEARRRGRADKLYQRRGYGPEKVAKAIVDAVKR  547 (582)
T ss_pred             CCcccchhhhHHhhhhhhccccCCCHHHHHHHHHHHHHc
Confidence                                  14799999999999873

>PRK05884 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.4e-32  Score=240.33  Aligned_cols=207  Identities=21%  Similarity=0.211  Sum_probs=175.6

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCccEE
Q 022103           32 IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDIL  111 (302)
Q Consensus        32 ~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id~l  111 (302)
                      +++||||++|||+++++.|+++|++|++++|+.+++++..+++     .+.++.+|++++++++++++++.+   .+|++
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~v~~~~~~~~~---~id~l   73 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKEL-----DVDAIVCDNTDPASLEEARGLFPH---HLDTI   73 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-----cCcEEecCCCCHHHHHHHHHHHhh---cCcEE
Confidence            4899999999999999999999999999999988877766554     356788999999999999887753   69999


Q ss_pred             EEcCCCCCC-------CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccc
Q 022103          112 VNNAGVSFN-------DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILE  184 (302)
Q Consensus       112 v~~aG~~~~-------~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~  184 (302)
                      |||+|....       .+.+ +.++|++++++|+.++++++++++|.|.+   .|+||+++|...               
T Consensus        74 v~~ag~~~~~~~~~~~~~~~-~~~~~~~~~~~N~~~~~~~~~~~~~~~~~---~g~Iv~isS~~~---------------  134 (223)
T PRK05884         74 VNVPAPSWDAGDPRTYSLAD-TANAWRNALDATVLSAVLTVQSVGDHLRS---GGSIISVVPENP---------------  134 (223)
T ss_pred             EECCCccccCCCCcccchhc-CHHHHHHHHHHHHHHHHHHHHHHHHHhhc---CCeEEEEecCCC---------------
Confidence            999985321       1223 57899999999999999999999999964   489999998651               


Q ss_pred             hhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCCC-
Q 022103          185 DEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQG-  263 (302)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~~-  263 (302)
                                                     +.+.+|++||+|+++|+++|+.|+.++||+||+|+||+++|++..... 
T Consensus       135 -------------------------------~~~~~Y~asKaal~~~~~~la~e~~~~gI~v~~v~PG~v~t~~~~~~~~  183 (223)
T PRK05884        135 -------------------------------PAGSAEAAIKAALSNWTAGQAAVFGTRGITINAVACGRSVQPGYDGLSR  183 (223)
T ss_pred             -------------------------------CCccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccCchhhhhccC
Confidence                                           013679999999999999999999999999999999999999855322 


Q ss_pred             --CCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          264 --SHTADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       264 --~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                        ...|++++..+.+|+. +...+++|+.+..+|..
T Consensus       184 ~p~~~~~~ia~~~~~l~s-~~~~~v~G~~i~vdgg~  218 (223)
T PRK05884        184 TPPPVAAEIARLALFLTT-PAARHITGQTLHVSHGA  218 (223)
T ss_pred             CCCCCHHHHHHHHHHHcC-chhhccCCcEEEeCCCe
Confidence              2378999999999987 67788999999998864

>PRK12744 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.6e-32  Score=241.77  Aligned_cols=225  Identities=19%  Similarity=0.262  Sum_probs=186.7

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecC----hhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHH
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARD----VERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWF  101 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~----~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~  101 (302)
                      ..+++|+++||||++|||+++|+.|+++|++|+++.++    .+.+++..+++...+.++.++.+|++++++++++++++
T Consensus         4 ~~l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~   83 (257)
T PRK12744          4 HSLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDA   83 (257)
T ss_pred             CCCCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHH
Confidence            34678999999999999999999999999997776643    34455666666655667889999999999999999999


Q ss_pred             HhhCCCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEe-cCCCcccccccCccc
Q 022103          102 KSNFAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNI-SSRLGTLSKVRNPNI  179 (302)
Q Consensus       102 ~~~~g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~v-sS~~~~~~~~~~~~~  179 (302)
                      .+.++++|++|||||.... ++.+.+.+++++++++|+.+++.++++++|.|.+.   ++++++ +|..+. .       
T Consensus        84 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~---~~iv~~~ss~~~~-~-------  152 (257)
T PRK12744         84 KAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDN---GKIVTLVTSLLGA-F-------  152 (257)
T ss_pred             HHhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccC---CCEEEEecchhcc-c-------
Confidence            9999999999999998644 56778999999999999999999999999998643   677776 454332 1       


Q ss_pred             ccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCC
Q 022103          180 KSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMT  259 (302)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~  259 (302)
                                                         .+.+..|++||+|++.|+++++.|+.++||+|+.|+||++.|++.
T Consensus       153 -----------------------------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~  197 (257)
T PRK12744        153 -----------------------------------TPFYSAYAGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFF  197 (257)
T ss_pred             -----------------------------------CCCcccchhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccchh
Confidence                                               122477999999999999999999999999999999999999875


Q ss_pred             CCC---------------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          260 QGQ---------------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       260 ~~~---------------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                      .+.                     +...+++++..+.+++. + ..+++|..+..++...
T Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~-~-~~~~~g~~~~~~gg~~  255 (257)
T PRK12744        198 YPQEGAEAVAYHKTAAALSPFSKTGLTDIEDIVPFIRFLVT-D-GWWITGQTILINGGYT  255 (257)
T ss_pred             ccccccchhhcccccccccccccCCCCCHHHHHHHHHHhhc-c-cceeecceEeecCCcc
Confidence            321                     23568999999999987 3 4678999999988754

>PRK12937 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1e-31  Score=238.71  Aligned_cols=225  Identities=28%  Similarity=0.331  Sum_probs=193.3

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecCh-hhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDV-ERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~-~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      ..++|+++||||++|||+++|+.|+++|++|+++.|+. ...++..+++...+.++.++.+|+++.+++.++++++.+.+
T Consensus         2 ~~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   81 (245)
T PRK12937          2 TLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAF   81 (245)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            46789999999999999999999999999998887764 34566667776667788999999999999999999999999


Q ss_pred             CCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccc
Q 022103          106 AALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILE  184 (302)
Q Consensus       106 g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~  184 (302)
                      +++|++|||||.... ++.+.+.++++.++++|+.+++.+++++++.|.+   .++||++||..+..+.+          
T Consensus        82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~iv~~ss~~~~~~~~----------  148 (245)
T PRK12937         82 GRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQ---GGRIINLSTSVIALPLP----------  148 (245)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhcc---CcEEEEEeeccccCCCC----------
Confidence            999999999997643 5677889999999999999999999999999864   48999999977654322          


Q ss_pred             hhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC--
Q 022103          185 DEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ--  262 (302)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~--  262 (302)
                                                      .+..|+++|++++.++++++.++.+.||+|+.|+||+++|+|..+.  
T Consensus       149 --------------------------------~~~~Y~~sK~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~  196 (245)
T PRK12937        149 --------------------------------GYGPYAASKAAVEGLVHVLANELRGRGITVNAVAPGPVATELFFNGKS  196 (245)
T ss_pred             --------------------------------CCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhcccCC
Confidence                                            2467999999999999999999998999999999999999985321  


Q ss_pred             --------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          263 --------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       263 --------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                                    ...++++++..+.+++. ++...++|.++..++..
T Consensus       197 ~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~-~~~~~~~g~~~~~~~g~  244 (245)
T PRK12937        197 AEQIDQLAGLAPLERLGTPEEIAAAVAFLAG-PDGAWVNGQVLRVNGGF  244 (245)
T ss_pred             HHHHHHHHhcCCCCCCCCHHHHHHHHHHHcC-ccccCccccEEEeCCCC
Confidence                          12578999999999986 56678999999988753

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=100.00  E-value=7.9e-32  Score=249.87  Aligned_cols=257  Identities=23%  Similarity=0.277  Sum_probs=193.4

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcC-CEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELG-LTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G-~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      .+|+++||||++|||+++|++|+++| ++|++++|+.++.++..+++...+.++.++.+|+++.++++++++++.+.+++
T Consensus         2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   81 (314)
T TIGR01289         2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRP   81 (314)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            37899999999999999999999999 99999999998888888877655567788999999999999999999888899


Q ss_pred             ccEEEEcCCCCCC--CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCC-CCCcEEEecCCCcccccccCcccccccc
Q 022103          108 LDILVNNAGVSFN--DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSP-SKSRILNISSRLGTLSKVRNPNIKSILE  184 (302)
Q Consensus       108 id~lv~~aG~~~~--~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~-~~~~iv~vsS~~~~~~~~~~~~~~~~~~  184 (302)
                      +|++|||||+..+  ...+.+.++|+.++++|+.+++++++.++|.|.+++ +.++||++||..+........ +     
T Consensus        82 iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~-~-----  155 (314)
T TIGR01289        82 LDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGN-V-----  155 (314)
T ss_pred             CCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCc-C-----
Confidence            9999999997543  234678999999999999999999999999998763 248999999998754311000 0     


Q ss_pred             hhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHcc-CCCcEEEEeecCcc-cCCCCCCC
Q 022103          185 DEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYE-GEGISVNSYCPGFT-QTSMTQGQ  262 (302)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~-~~gI~V~~v~PG~v-~T~~~~~~  262 (302)
                      .++.+...+..+...   ..+...+.......++.+|++||+|+..+++.|++++. +.||+|++|+||+| +|+|.+..
T Consensus       156 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~l~~~~  232 (314)
T TIGR01289       156 PPKANLGDLSGLAAG---FKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTGLFREH  232 (314)
T ss_pred             CCccccccccccccc---CCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCcccccc
Confidence            000000000000000   00000111112234467899999999999999999985 46999999999999 69997642


Q ss_pred             -----------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCC
Q 022103          263 -----------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLD  295 (302)
Q Consensus       263 -----------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~  295 (302)
                                       +..++++.|..++.++..+.. ..+|.||.+.+
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~~~-~~~g~~~~~~~  281 (314)
T TIGR01289       233 VPLFRTLFPPFQKYITKGYVSEEEAGERLAQVVSDPKL-KKSGVYWSWGN  281 (314)
T ss_pred             cHHHHHHHHHHHHHHhccccchhhhhhhhHHhhcCccc-CCCceeeecCC
Confidence                             246889999999998774433 36899887644

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK06500 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6e-32  Score=240.73  Aligned_cols=221  Identities=24%  Similarity=0.248  Sum_probs=191.0

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      +++|+++||||+++||++++++|+++|++|++++|+.+++++..+++   +.++.++++|++|.+++..+++.+.+.+++
T Consensus         4 ~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (249)
T PRK06500          4 LQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAEL---GESALVIRADAGDVAAQKALAQALAEAFGR   80 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            57899999999999999999999999999999999987766665554   457888999999999999999999999999


Q ss_pred             ccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchh
Q 022103          108 LDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDE  186 (302)
Q Consensus       108 id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~  186 (302)
                      +|++|||||.... ++.+.+.++++.++++|+.++++++++++|.|.+   .+++|+++|..+..+.+            
T Consensus        81 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~~i~~~S~~~~~~~~------------  145 (249)
T PRK06500         81 LDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLAN---PASIVLNGSINAHIGMP------------  145 (249)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc---CCEEEEEechHhccCCC------------
Confidence            9999999997643 5677899999999999999999999999999854   37899999877665432            


Q ss_pred             hhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC----
Q 022103          187 ELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ----  262 (302)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~----  262 (302)
                                                    ...+|+++|++++.++++++.|+.++||+|+.|+||.++|++....    
T Consensus       146 ------------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~  195 (249)
T PRK06500        146 ------------------------------NSSVYAASKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTPLYGKLGLPE  195 (249)
T ss_pred             ------------------------------CccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHHHHhhccCc
Confidence                                          2367999999999999999999988999999999999999975321    


Q ss_pred             -----------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          263 -----------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       263 -----------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                                       ...+++++|..+.+++. +...+++|..+..++..
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~-~~~~~~~g~~i~~~gg~  246 (249)
T PRK06500        196 ATLDAVAAQIQALVPLGRFGTPEEIAKAVLYLAS-DESAFIVGSEIIVDGGM  246 (249)
T ss_pred             cchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcC-ccccCccCCeEEECCCc
Confidence                             12478999999999986 55678999999998874

>PLN02780 ketoreductase/ oxidoreductase

Probab=100.00  E-value=2.6e-32  Score=253.88  Aligned_cols=209  Identities=25%  Similarity=0.370  Sum_probs=173.3

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhC--CCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEK--GLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      ..|++++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.  +.++..+.+|+++  ++.+.++++.+.+
T Consensus        51 ~~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~--~~~~~~~~l~~~~  128 (320)
T PLN02780         51 KYGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSG--DIDEGVKRIKETI  128 (320)
T ss_pred             ccCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCC--CcHHHHHHHHHHh
Confidence            45899999999999999999999999999999999999999998888754  2467888999995  2223333333333


Q ss_pred             C--CccEEEEcCCCCCC---CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccc
Q 022103          106 A--ALDILVNNAGVSFN---DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIK  180 (302)
Q Consensus       106 g--~id~lv~~aG~~~~---~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~  180 (302)
                      +  ++|++|||||....   .+.+.+.+++++++++|+.+++.+++.++|.|.++ +.|+||++||..+.....      
T Consensus       129 ~~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~~g~IV~iSS~a~~~~~~------  201 (320)
T PLN02780        129 EGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKR-KKGAIINIGSGAAIVIPS------  201 (320)
T ss_pred             cCCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhc-CCcEEEEEechhhccCCC------
Confidence            3  46799999998642   46788999999999999999999999999999876 579999999988753110      


Q ss_pred             cccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCC
Q 022103          181 SILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ  260 (302)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~  260 (302)
                                                        .+++..|++||+++++|+++|+.|+.++||+|++|+||+|+|+|..
T Consensus       202 ----------------------------------~p~~~~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~  247 (320)
T PLN02780        202 ----------------------------------DPLYAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMAS  247 (320)
T ss_pred             ----------------------------------CccchHHHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCccc
Confidence                                              1234789999999999999999999999999999999999999976


Q ss_pred             CC----CCCCHHHHHHHHHHHhh
Q 022103          261 GQ----GSHTADEAADVGARLLL  279 (302)
Q Consensus       261 ~~----~~~~~~~~a~~~~~l~~  279 (302)
                      ..    ...+|+++|..++..+.
T Consensus       248 ~~~~~~~~~~p~~~A~~~~~~~~  270 (320)
T PLN02780        248 IRRSSFLVPSSDGYARAALRWVG  270 (320)
T ss_pred             ccCCCCCCCCHHHHHHHHHHHhC
Confidence            32    13589999999999885

>PRK06138 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.8e-32  Score=240.08  Aligned_cols=226  Identities=28%  Similarity=0.356  Sum_probs=196.8

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      ++++|+++||||+|+||++++++|+++|++|++++|+.+..+...+.+. .+.++.++.+|++|.++++++++++.+.++
T Consensus         2 ~~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   80 (252)
T PRK06138          2 RLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIA-AGGRAFARQGDVGSAEAVEALVDFVAARWG   80 (252)
T ss_pred             CCCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHh-cCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4689999999999999999999999999999999999888777777665 455788999999999999999999999999


Q ss_pred             CccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccch
Q 022103          107 ALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILED  185 (302)
Q Consensus       107 ~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~  185 (302)
                      ++|+||||+|.... .+.+.+.++++.++++|+.+++.+++++++.|+++ ..++|+++||..+..+.+.          
T Consensus        81 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~ii~~sS~~~~~~~~~----------  149 (252)
T PRK06138         81 RLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQ-GGGSIVNTASQLALAGGRG----------  149 (252)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhc-CCeEEEEECChhhccCCCC----------
Confidence            99999999997654 45778999999999999999999999999999876 5689999999877654322          


Q ss_pred             hhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC---
Q 022103          186 EELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ---  262 (302)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~---  262 (302)
                                                      ...|+.+|++++.++++++.++..+||+|++|+||.++|++....   
T Consensus       150 --------------------------------~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~  197 (252)
T PRK06138        150 --------------------------------RAAYVASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRRIFAR  197 (252)
T ss_pred             --------------------------------ccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCcchhhhhcc
Confidence                                            367999999999999999999988899999999999999885421   


Q ss_pred             ------------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          263 ------------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       263 ------------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                                        ....+++++..+.+++. ++....+|.++..++..
T Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~-~~~~~~~g~~~~~~~g~  249 (252)
T PRK06138        198 HADPEALREALRARHPMNRFGTAEEVAQAALFLAS-DESSFATGTTLVVDGGW  249 (252)
T ss_pred             ccChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcC-chhcCccCCEEEECCCe
Confidence                              13568999999999986 55677999999988763

>PRK08703 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-31  Score=237.70  Aligned_cols=222  Identities=22%  Similarity=0.282  Sum_probs=190.8

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCC-CceeEEEeeCCC--HHHHHHHHHHHHh
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKG-LPVNFFQLDVSD--PSSIEAFVSWFKS  103 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dlt~--~~~~~~~~~~~~~  103 (302)
                      .+++|+++||||++|||+++++.|+++|++|++++|+.++++...+++.+.+ ..+.++.+|+++  .+++.++++++.+
T Consensus         3 ~l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~   82 (239)
T PRK08703          3 TLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAE   82 (239)
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHH
Confidence            4788999999999999999999999999999999999988888888876543 456788999985  6789999999998


Q ss_pred             hC-CCccEEEEcCCCCCC--CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccc
Q 022103          104 NF-AALDILVNNAGVSFN--DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIK  180 (302)
Q Consensus       104 ~~-g~id~lv~~aG~~~~--~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~  180 (302)
                      .+ +.+|++|||||....  ++.+.+.+++++.+++|+.+++++++++++.|.+. ..+++|+++|..+..+.       
T Consensus        83 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-~~~~iv~~ss~~~~~~~-------  154 (239)
T PRK08703         83 ATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQS-PDASVIFVGESHGETPK-------  154 (239)
T ss_pred             HhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhC-CCCEEEEEeccccccCC-------
Confidence            88 899999999997532  56788999999999999999999999999999876 46899999997775442       


Q ss_pred             cccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCC-CcEEEEeecCcccCCCC
Q 022103          181 SILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGE-GISVNSYCPGFTQTSMT  259 (302)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~-gI~V~~v~PG~v~T~~~  259 (302)
                                                         +++.+|++||++++.++++++.|+.++ +|+|++|+||+|+|++.
T Consensus       155 -----------------------------------~~~~~Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~  199 (239)
T PRK08703        155 -----------------------------------AYWGGFGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQR  199 (239)
T ss_pred             -----------------------------------CCccchHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCccc
Confidence                                               224689999999999999999999876 69999999999999985


Q ss_pred             CCC-------CCCCHHHHHHHHHHHhhcCCCCCCCcceee
Q 022103          260 QGQ-------GSHTADEAADVGARLLLLHPQQLPTAKFYI  292 (302)
Q Consensus       260 ~~~-------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~  292 (302)
                      ...       ...++++++..+.+++. +....++|+++.
T Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~  238 (239)
T PRK08703        200 IKSHPGEAKSERKSYGDVLPAFVWWAS-AESKGRSGEIVY  238 (239)
T ss_pred             cccCCCCCccccCCHHHHHHHHHHHhC-ccccCcCCeEee
Confidence            532       12568999999999997 778889998874

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-31  Score=240.72  Aligned_cols=228  Identities=21%  Similarity=0.279  Sum_probs=197.1

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      .+++|+++||||+|+||+++++.|+++|++|++++|+.++.++..+++.+.+.++.++.+|+++.++++++++++.+.++
T Consensus         4 ~~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   83 (262)
T PRK13394          4 NLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFG   83 (262)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            46789999999999999999999999999999999999888888888877777788999999999999999999998889


Q ss_pred             CccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccch
Q 022103          107 ALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILED  185 (302)
Q Consensus       107 ~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~  185 (302)
                      ++|+||||+|.... .+.+.+.++++..+++|+.+++.+++.+++.|.+..+.++||++||..+..+.            
T Consensus        84 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~~~------------  151 (262)
T PRK13394         84 SVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEAS------------  151 (262)
T ss_pred             CCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcCCC------------
Confidence            99999999998644 45667889999999999999999999999999333367899999997665332            


Q ss_pred             hhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCC----
Q 022103          186 EELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG----  261 (302)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~----  261 (302)
                                                    ++...|+++|++++.+++.++.++.+.||+|++|+||+++|++.+.    
T Consensus       152 ------------------------------~~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~~~~  201 (262)
T PRK13394        152 ------------------------------PLKSAYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIPE  201 (262)
T ss_pred             ------------------------------CCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhhhHh
Confidence                                          1236799999999999999999998889999999999999986421    


Q ss_pred             -----------------------CCCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          262 -----------------------QGSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       262 -----------------------~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                                             .....+++++..+.+++. .....++|.+|..++++
T Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~l~~-~~~~~~~g~~~~~~~g~  259 (262)
T PRK13394        202 QAKELGISEEEVVKKVMLGKTVDGVFTTVEDVAQTVLFLSS-FPSAALTGQSFVVSHGW  259 (262)
T ss_pred             hhhccCCChHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHcC-ccccCCcCCEEeeCCce
Confidence                                   123688999999999987 44566889999998874

>PRK07774 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-31  Score=238.32  Aligned_cols=225  Identities=27%  Similarity=0.311  Sum_probs=194.3

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      .+++|+++||||+||||++++++|+++|++|++++|+.+..++..+++.+.+..+..+.+|+++.++++++++++.+.++
T Consensus         3 ~~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   82 (250)
T PRK07774          3 RFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFG   82 (250)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            35789999999999999999999999999999999998887777777766556778899999999999999999999999


Q ss_pred             CccEEEEcCCCCC----CCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccc
Q 022103          107 ALDILVNNAGVSF----NDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSI  182 (302)
Q Consensus       107 ~id~lv~~aG~~~----~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~  182 (302)
                      .+|+||||||...    .++.+.+.+.+++.+++|+.+++++++++++.|.+. +.++||++||..+..+          
T Consensus        83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~~sS~~~~~~----------  151 (250)
T PRK07774         83 GIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKR-GGGAIVNQSSTAAWLY----------  151 (250)
T ss_pred             CCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHh-CCcEEEEEecccccCC----------
Confidence            9999999999753    245677899999999999999999999999999776 4689999999876421          


Q ss_pred             cchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC
Q 022103          183 LEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ  262 (302)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~  262 (302)
                                                         ...|++||++++.+++++++++.+.||+|+.|+||.++|++....
T Consensus       152 -----------------------------------~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~  196 (250)
T PRK07774        152 -----------------------------------SNFYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTV  196 (250)
T ss_pred             -----------------------------------ccccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCcccccc
Confidence                                               257999999999999999999988899999999999999996542


Q ss_pred             C----------------CCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          263 G----------------SHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       263 ~----------------~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                      .                ..++++++..+..++. +.....+|.+|..+++..
T Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~-~~~~~~~g~~~~v~~g~~  247 (250)
T PRK07774        197 TPKEFVADMVKGIPLSRMGTPEDLVGMCLFLLS-DEASWITGQIFNVDGGQI  247 (250)
T ss_pred             CCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC-hhhhCcCCCEEEECCCee
Confidence            1                2468999999988876 344457899998888754

>PRK06484 short chain dehydrogenase; Validated

Probab=100.00  E-value=6.6e-32  Score=265.95  Aligned_cols=224  Identities=29%  Similarity=0.380  Sum_probs=194.8

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      .++|+++|||+++|||+++|++|+++|++|++++|+.+++++..+++   +.++.++.+|++++++++++++++.+.+++
T Consensus         3 ~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   79 (520)
T PRK06484          3 AQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSL---GPDHHALAMDVSDEAQIREGFEQLHREFGR   79 (520)
T ss_pred             CCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceeEEEeccCCHHHHHHHHHHHHHHhCC
Confidence            46899999999999999999999999999999999998887776665   346788999999999999999999999999


Q ss_pred             ccEEEEcCCCCC---CCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccc
Q 022103          108 LDILVNNAGVSF---NDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILE  184 (302)
Q Consensus       108 id~lv~~aG~~~---~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~  184 (302)
                      +|+||||||...   .++.+.+.++|+.++++|+.+++.++++++|.|.+++..++||++||..+..+.+          
T Consensus        80 iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~~----------  149 (520)
T PRK06484         80 IDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVALP----------  149 (520)
T ss_pred             CCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCCC----------
Confidence            999999999742   2467889999999999999999999999999998763335999999988875532          


Q ss_pred             hhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC--
Q 022103          185 DEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ--  262 (302)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~--  262 (302)
                                                      .+.+|+++|+++++|+++|+.|+.+.||+|+.|+||+|+|+|....  
T Consensus       150 --------------------------------~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~  197 (520)
T PRK06484        150 --------------------------------KRTAYSASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQMVAELER  197 (520)
T ss_pred             --------------------------------CCchHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCchhhhhhcc
Confidence                                            2478999999999999999999999999999999999999986421  


Q ss_pred             ----------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          263 ----------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       263 ----------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                                      ...+|+++++.+.+++. +....++|.++..++..
T Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~va~~v~~l~~-~~~~~~~G~~~~~~gg~  247 (520)
T PRK06484        198 AGKLDPSAVRSRIPLGRLGRPEEIAEAVFFLAS-DQASYITGSTLVVDGGW  247 (520)
T ss_pred             cchhhhHHHHhcCCCCCCcCHHHHHHHHHHHhC-ccccCccCceEEecCCe
Confidence                            12479999999999987 56677899999888764

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-31  Score=240.73  Aligned_cols=225  Identities=20%  Similarity=0.206  Sum_probs=192.0

Q ss_pred             CcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCC--CceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           30 ETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKG--LPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        30 ~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      +|+++||||+++||++++++|+++|++|++++|+..+++...+++.+..  .++.++.+|+++.+++.++++++.+.+++
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   81 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR   81 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            6899999999999999999999999999999999888877777765432  46889999999999999999999999999


Q ss_pred             ccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchh
Q 022103          108 LDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDE  186 (302)
Q Consensus       108 id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~  186 (302)
                      +|++|||||.... ++.+.+.++|+..+++|+.+++++++++.+.|.+....++||++||..+..+..            
T Consensus        82 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~------------  149 (259)
T PRK12384         82 VDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSK------------  149 (259)
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCCC------------
Confidence            9999999997654 567889999999999999999999999999998763358999999987654422            


Q ss_pred             hhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcc-cCCCCCCC---
Q 022103          187 ELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFT-QTSMTQGQ---  262 (302)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v-~T~~~~~~---  262 (302)
                                                    ...+|++||++++.++++++.|+.++||+|++|+||.+ .|++....   
T Consensus       150 ------------------------------~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~~~~~~  199 (259)
T PRK12384        150 ------------------------------HNSGYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQ  199 (259)
T ss_pred             ------------------------------CCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccchhhhhhhHH
Confidence                                          23679999999999999999999999999999999975 66664321   


Q ss_pred             -----------------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          263 -----------------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       263 -----------------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                                             ....++++++.+++|+. ....+++|..|..++..
T Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~l~~-~~~~~~~G~~~~v~~g~  256 (259)
T PRK12384        200 YAKKLGIKPDEVEQYYIDKVPLKRGCDYQDVLNMLLFYAS-PKASYCTGQSINVTGGQ  256 (259)
T ss_pred             HHHhcCCChHHHHHHHHHhCcccCCCCHHHHHHHHHHHcC-cccccccCceEEEcCCE
Confidence                                   12578999999999986 45567899998888764

>PRK06123 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.3e-31  Score=237.03  Aligned_cols=225  Identities=28%  Similarity=0.325  Sum_probs=189.6

Q ss_pred             CcEEEEeCCCchHHHHHHHHHHHcCCEEEEEe-cChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCc
Q 022103           30 ETIAIVTGANKGIGFALVKRLAELGLTVILTA-RDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAAL  108 (302)
Q Consensus        30 ~k~vlItGas~gIG~ala~~l~~~G~~V~l~~-r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~i  108 (302)
                      +|+++||||+++||.+++++|+++|++|++.. |+.++.+.....+...+.++.++.+|++|.+++.++++++.+.++++
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRL   81 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence            57899999999999999999999999988876 45556666666676666678899999999999999999999999999


Q ss_pred             cEEEEcCCCCCC--CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCC--CCCcEEEecCCCcccccccCcccccccc
Q 022103          109 DILVNNAGVSFN--DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSP--SKSRILNISSRLGTLSKVRNPNIKSILE  184 (302)
Q Consensus       109 d~lv~~aG~~~~--~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~--~~~~iv~vsS~~~~~~~~~~~~~~~~~~  184 (302)
                      |+||||||....  .+.+.+.++|++++++|+.+++++++++++.|.++.  ..++||++||..+..+.+.         
T Consensus        82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~---------  152 (248)
T PRK06123         82 DALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPG---------  152 (248)
T ss_pred             CEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCCC---------
Confidence            999999998643  467789999999999999999999999999987541  2578999999887654321         


Q ss_pred             hhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC--
Q 022103          185 DEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ--  262 (302)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~--  262 (302)
                                                      .+..|+++|++++.++++++.++.+.||+|+.|+||.+.|++....  
T Consensus       153 --------------------------------~~~~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~~~  200 (248)
T PRK06123        153 --------------------------------EYIDYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASGGE  200 (248)
T ss_pred             --------------------------------CccchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhccCC
Confidence                                            1356999999999999999999988999999999999999975321  


Q ss_pred             --------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCc
Q 022103          263 --------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDP  296 (302)
Q Consensus       263 --------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  296 (302)
                                    ...++++++..+.+++. ....+++|.+|..++.
T Consensus       201 ~~~~~~~~~~~p~~~~~~~~d~a~~~~~l~~-~~~~~~~g~~~~~~gg  247 (248)
T PRK06123        201 PGRVDRVKAGIPMGRGGTAEEVARAILWLLS-DEASYTTGTFIDVSGG  247 (248)
T ss_pred             HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC-ccccCccCCEEeecCC
Confidence                          11468999999999987 4556789999988764

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=100.00  E-value=1.8e-31  Score=236.82  Aligned_cols=225  Identities=27%  Similarity=0.318  Sum_probs=194.2

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      ++++++++||||+|+||++++++|+++|+.|++.+|+.++++.....+   +.++.++.+|+++.++++++++++.+.++
T Consensus         3 ~~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (245)
T PRK12936          3 DLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAEL---GERVKIFPANLSDRDEVKALGQKAEADLE   79 (245)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh---CCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            467899999999999999999999999999999999988877665544   34678899999999999999999999999


Q ss_pred             CccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccch
Q 022103          107 ALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILED  185 (302)
Q Consensus       107 ~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~  185 (302)
                      ++|++|||||.... ++.+.+.+++++++++|+.+++++++++.+.+.++ ..++||++||..+..+.+.          
T Consensus        80 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~~sS~~~~~~~~~----------  148 (245)
T PRK12936         80 GVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRR-RYGRIINITSVVGVTGNPG----------  148 (245)
T ss_pred             CCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHh-CCCEEEEECCHHhCcCCCC----------
Confidence            99999999998644 45677889999999999999999999999988765 5689999999877654322          


Q ss_pred             hhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC---
Q 022103          186 EELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ---  262 (302)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~---  262 (302)
                                                      +..|+++|++++.+++.++.++.+.||+|++|+||+++|++....   
T Consensus       149 --------------------------------~~~Y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~~  196 (245)
T PRK12936        149 --------------------------------QANYCASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESAMTGKLNDK  196 (245)
T ss_pred             --------------------------------CcchHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcCcCchhcccChH
Confidence                                            367999999999999999999988899999999999999886432   


Q ss_pred             ------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          263 ------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       263 ------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                                  ....+++++..+.+++. +...+++|+++..+++..
T Consensus       197 ~~~~~~~~~~~~~~~~~~~ia~~~~~l~~-~~~~~~~G~~~~~~~g~~  243 (245)
T PRK12936        197 QKEAIMGAIPMKRMGTGAEVASAVAYLAS-SEAAYVTGQTIHVNGGMA  243 (245)
T ss_pred             HHHHHhcCCCCCCCcCHHHHHHHHHHHcC-ccccCcCCCEEEECCCcc
Confidence                        12468999999999986 456678999999988765

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=100.00  E-value=2e-31  Score=238.34  Aligned_cols=227  Identities=29%  Similarity=0.387  Sum_probs=199.1

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      +++|+++|||++|+||++++++|+++|++|++++|+.++++...+++...+.++.++.+|++++++++++++++.+.++.
T Consensus         2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   81 (258)
T PRK12429          2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGG   81 (258)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            56799999999999999999999999999999999999888888888766678899999999999999999999999999


Q ss_pred             ccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchh
Q 022103          108 LDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDE  186 (302)
Q Consensus       108 id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~  186 (302)
                      +|+||||||.... ...+.+.++++..+++|+.+++.+++.+++.|.++ ..++||++||..+..+.+            
T Consensus        82 ~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~iss~~~~~~~~------------  148 (258)
T PRK12429         82 VDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQ-GGGRIINMASVHGLVGSA------------  148 (258)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhc-CCeEEEEEcchhhccCCC------------
Confidence            9999999997544 46778889999999999999999999999999887 578999999988765432            


Q ss_pred             hhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCC-----
Q 022103          187 ELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG-----  261 (302)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~-----  261 (302)
                                                    ++..|+++|++++.+++.++.++.+.||+|++|+||+++|++...     
T Consensus       149 ------------------------------~~~~y~~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~~~~~~  198 (258)
T PRK12429        149 ------------------------------GKAAYVSAKHGLIGLTKVVALEGATHGVTVNAICPGYVDTPLVRKQIPDL  198 (258)
T ss_pred             ------------------------------CcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCcchhhhhhhhhh
Confidence                                          246799999999999999999998899999999999999987531     


Q ss_pred             ----------------------CCCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          262 ----------------------QGSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       262 ----------------------~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                                            ....+++++|..+.+++. +....++|++|..++++.
T Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~-~~~~~~~g~~~~~~~g~~  256 (258)
T PRK12429        199 AKERGISEEEVLEDVLLPLVPQKRFTTVEEIADYALFLAS-FAAKGVTGQAWVVDGGWT  256 (258)
T ss_pred             ccccCCChHHHHHHHHhccCCccccCCHHHHHHHHHHHcC-ccccCccCCeEEeCCCEe
Confidence                                  123679999999999986 445567899999998864

>PRK07454 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.3e-31  Score=236.41  Aligned_cols=222  Identities=25%  Similarity=0.348  Sum_probs=191.7

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCc
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAAL  108 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~i  108 (302)
                      ++|+++||||+++||++++++|+++|++|++++|+.++.++..+.+.+.+.++.++.+|+++++++.++++++.+.++++
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   84 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGCP   84 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            45899999999999999999999999999999999988888888777666788899999999999999999999999999


Q ss_pred             cEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhh
Q 022103          109 DILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEE  187 (302)
Q Consensus       109 d~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~  187 (302)
                      |+||||+|.... ++.+.+.++++.++++|+.+++.+++.+++.|.++ ..++||++||..+..+..             
T Consensus        85 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~isS~~~~~~~~-------------  150 (241)
T PRK07454         85 DVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRAR-GGGLIINVSSIAARNAFP-------------  150 (241)
T ss_pred             CEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhc-CCcEEEEEccHHhCcCCC-------------
Confidence            999999997644 45677889999999999999999999999999876 468999999987764422             


Q ss_pred             hcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC-----
Q 022103          188 LSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ-----  262 (302)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~-----  262 (302)
                                                   ++..|+.+|++++.++++++.++.+.||+++.|+||.++|++....     
T Consensus       151 -----------------------------~~~~Y~~sK~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~~~~~~~  201 (241)
T PRK07454        151 -----------------------------QWGAYCVSKAALAAFTKCLAEEERSHGIRVCTITLGAVNTPLWDTETVQAD  201 (241)
T ss_pred             -----------------------------CccHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCcccCCcccccccccc
Confidence                                         2467999999999999999999988999999999999999985421     


Q ss_pred             ----CCCCHHHHHHHHHHHhhcCCCCCCCcceeec
Q 022103          263 ----GSHTADEAADVGARLLLLHPQQLPTAKFYIG  293 (302)
Q Consensus       263 ----~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~  293 (302)
                          ...+++++|..+.+++..+....+.+..|..
T Consensus       202 ~~~~~~~~~~~va~~~~~l~~~~~~~~~~~~~~~~  236 (241)
T PRK07454        202 FDRSAMLSPEQVAQTILHLAQLPPSAVIEDLTLMP  236 (241)
T ss_pred             cccccCCCHHHHHHHHHHHHcCCccceeeeEEeec
Confidence                2368999999999999855555555555543

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=100.00  E-value=1.8e-31  Score=237.81  Aligned_cols=226  Identities=27%  Similarity=0.318  Sum_probs=197.6

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      +++++++||||+|+||++++++|+++|++|++++|+.++.++..+.+.+.+.++.++.+|+++.++++++++++.+.+++
T Consensus         1 ~~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~   80 (250)
T TIGR03206         1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGP   80 (250)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            46899999999999999999999999999999999998888877777766667899999999999999999999998999


Q ss_pred             ccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchh
Q 022103          108 LDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDE  186 (302)
Q Consensus       108 id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~  186 (302)
                      +|++|||+|.... ++.+.+.++++..+++|+.+++++++.+++.|.+. ..++||++||..+..+.+            
T Consensus        81 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~ii~iss~~~~~~~~------------  147 (250)
T TIGR03206        81 VDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVER-GAGRIVNIASDAARVGSS------------  147 (250)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCeEEEEECchhhccCCC------------
Confidence            9999999997543 56677889999999999999999999999999876 568999999987764432            


Q ss_pred             hhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC----
Q 022103          187 ELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ----  262 (302)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~----  262 (302)
                                                    .+..|+.+|++++.++++++.++.+.||+|+.|+||.++|++....    
T Consensus       148 ------------------------------~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~  197 (250)
T TIGR03206       148 ------------------------------GEAVYAACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTALLDDICGGA  197 (250)
T ss_pred             ------------------------------CCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccchhHHhhhhcc
Confidence                                          2367999999999999999999988899999999999999874321    


Q ss_pred             -----------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          263 -----------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       263 -----------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                                       ...+++++|+.+.+++. +...+++|.++..++..
T Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~-~~~~~~~g~~~~~~~g~  248 (250)
T TIGR03206       198 ENPEKLREAFTRAIPLGRLGQPDDLPGAILFFSS-DDASFITGQVLSVSGGL  248 (250)
T ss_pred             CChHHHHHHHHhcCCccCCcCHHHHHHHHHHHcC-cccCCCcCcEEEeCCCc
Confidence                             12579999999999987 57778999999988764

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=100.00  E-value=1.9e-31  Score=238.13  Aligned_cols=221  Identities=24%  Similarity=0.267  Sum_probs=191.0

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      ..+++|+++|||++++||++++++|+++|++|++++|+.         +...+.++.++.+|++++++++++++++.+.+
T Consensus         4 ~~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~---------~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   74 (252)
T PRK08220          4 MDFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF---------LTQEDYPFATFVLDVSDAAAVAQVCQRLLAET   74 (252)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch---------hhhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            558899999999999999999999999999999999986         12234578899999999999999999999999


Q ss_pred             CCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccc
Q 022103          106 AALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILE  184 (302)
Q Consensus       106 g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~  184 (302)
                      +++|++|||+|.... ++.+.+.+++++.+++|+.+++.+++++++.|+++ ..++||++||..+..+..          
T Consensus        75 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~~ss~~~~~~~~----------  143 (252)
T PRK08220         75 GPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQ-RSGAIVTVGSNAAHVPRI----------  143 (252)
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC-CCCEEEEECCchhccCCC----------
Confidence            999999999997643 56778899999999999999999999999999876 568999999987654321          


Q ss_pred             hhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC--
Q 022103          185 DEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ--  262 (302)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~--  262 (302)
                                                      .+..|+++|++++.++++++.|+.++||+|++|+||+++|++....  
T Consensus       144 --------------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~  191 (252)
T PRK08220        144 --------------------------------GMAAYGASKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWV  191 (252)
T ss_pred             --------------------------------CCchhHHHHHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhcc
Confidence                                            2377999999999999999999999999999999999999874321  


Q ss_pred             -----------------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcccC
Q 022103          263 -----------------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVK  299 (302)
Q Consensus       263 -----------------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  299 (302)
                                             ....++++|..+++|+. +...+++|..+..++....
T Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~-~~~~~~~g~~i~~~gg~~~  250 (252)
T PRK08220        192 DEDGEQQVIAGFPEQFKLGIPLGKIARPQEIANAVLFLAS-DLASHITLQDIVVDGGATL  250 (252)
T ss_pred             chhhhhhhhhhHHHHHhhcCCCcccCCHHHHHHHHHHHhc-chhcCccCcEEEECCCeec
Confidence                                   12568999999999986 5677899999999887543

>PRK07024 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2e-31  Score=239.52  Aligned_cols=206  Identities=26%  Similarity=0.342  Sum_probs=180.6

Q ss_pred             CcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCcc
Q 022103           30 ETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALD  109 (302)
Q Consensus        30 ~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id  109 (302)
                      +++++||||++|||+++++.|+++|++|++++|+.+++++..+++...+ ++.++.+|++|.+++.++++++.++++.+|
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id   80 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAA-RVSVYAADVRDADALAAAAADFIAAHGLPD   80 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCC-eeEEEEcCCCCHHHHHHHHHHHHHhCCCCC
Confidence            4789999999999999999999999999999999988887777665444 788999999999999999999999999999


Q ss_pred             EEEEcCCCCCC-CC-CCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhh
Q 022103          110 ILVNNAGVSFN-DI-YKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEE  187 (302)
Q Consensus       110 ~lv~~aG~~~~-~~-~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~  187 (302)
                      ++|||||.... .. .+.+.++++.++++|+.+++++++.++|.|.+. +.++||++||..+..+.+.            
T Consensus        81 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~-~~~~iv~isS~~~~~~~~~------------  147 (257)
T PRK07024         81 VVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAA-RRGTLVGIASVAGVRGLPG------------  147 (257)
T ss_pred             EEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhc-CCCEEEEEechhhcCCCCC------------
Confidence            99999997643 22 337889999999999999999999999999877 5689999999888755322            


Q ss_pred             hcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCCC----
Q 022103          188 LSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQG----  263 (302)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~~----  263 (302)
                                                    ...|++||++++.++++++.|+.++||+|++|+||+++|++.....    
T Consensus       148 ------------------------------~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~  197 (257)
T PRK07024        148 ------------------------------AGAYSASKAAAIKYLESLRVELRPAGVRVVTIAPGYIRTPMTAHNPYPMP  197 (257)
T ss_pred             ------------------------------CcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCcCchhhcCCCCCC
Confidence                                          3679999999999999999999989999999999999999865432    


Q ss_pred             -CCCHHHHHHHHHHHhh
Q 022103          264 -SHTADEAADVGARLLL  279 (302)
Q Consensus       264 -~~~~~~~a~~~~~l~~  279 (302)
                       ..++++++..+...+.
T Consensus       198 ~~~~~~~~a~~~~~~l~  214 (257)
T PRK07024        198 FLMDADRFAARAARAIA  214 (257)
T ss_pred             CccCHHHHHHHHHHHHh
Confidence             2579999999999886

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=100.00  E-value=2.6e-31  Score=236.71  Aligned_cols=225  Identities=30%  Similarity=0.361  Sum_probs=193.4

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEec-ChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTAR-DVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r-~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      +++|+++||||++|||.++|++|+++|++|+++.+ +.+..++..+.+.+.+.++.++.+|+++++++.++++++.+.++
T Consensus         4 ~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   83 (247)
T PRK12935          4 LNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFG   83 (247)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            67899999999999999999999999999987654 55666777777766666789999999999999999999999999


Q ss_pred             CccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccch
Q 022103          107 ALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILED  185 (302)
Q Consensus       107 ~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~  185 (302)
                      ++|+||||||.... .+.+.+.+++++++++|+.+++++++++++.|.+. ..++||++||..+..+..           
T Consensus        84 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~~sS~~~~~~~~-----------  151 (247)
T PRK12935         84 KVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEA-EEGRIISISSIIGQAGGF-----------  151 (247)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEEEEcchhhcCCCC-----------
Confidence            99999999998654 45678889999999999999999999999999766 468999999987764421           


Q ss_pred             hhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC---
Q 022103          186 EELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ---  262 (302)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~---  262 (302)
                                                     ++..|+++|++++.++++++.++.+.||+++.|+||.++|++....   
T Consensus       152 -------------------------------~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~  200 (247)
T PRK12935        152 -------------------------------GQTNYSAAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVAEVPEE  200 (247)
T ss_pred             -------------------------------CCcchHHHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhhccHH
Confidence                                           2478999999999999999999988899999999999999875532   


Q ss_pred             ------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          263 ------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       263 ------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                                  ....+++++..+++++. + ....+|..+..++..
T Consensus       201 ~~~~~~~~~~~~~~~~~edva~~~~~~~~-~-~~~~~g~~~~i~~g~  245 (247)
T PRK12935        201 VRQKIVAKIPKKRFGQADEIAKGVVYLCR-D-GAYITGQQLNINGGL  245 (247)
T ss_pred             HHHHHHHhCCCCCCcCHHHHHHHHHHHcC-c-ccCccCCEEEeCCCc
Confidence                        23679999999999885 3 346889999888764

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=100.00  E-value=3.9e-33  Score=239.66  Aligned_cols=218  Identities=26%  Similarity=0.325  Sum_probs=186.5

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhC--CCceeEEEeeCCCHHHHHHHHHHHHh
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEK--GLPVNFFQLDVSDPSSIEAFVSWFKS  103 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dlt~~~~~~~~~~~~~~  103 (302)
                      ++++||.|++||+.||||++++++|+++|.+++++.-+.+..+..+ ++++.  ..++.|++||+++.+++++.++++.+
T Consensus         1 m~~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~a-kL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~   79 (261)
T KOG4169|consen    1 MDLTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIA-KLQAINPSVSVIFIKCDVTNRGDLEAAFDKILA   79 (261)
T ss_pred             CcccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHH-HHhccCCCceEEEEEeccccHHHHHHHHHHHHH
Confidence            3567999999999999999999999999999988888887755443 44443  35789999999999999999999999


Q ss_pred             hCCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCC--CCCcEEEecCCCcccccccCccccc
Q 022103          104 NFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSP--SKSRILNISSRLGTLSKVRNPNIKS  181 (302)
Q Consensus       104 ~~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~--~~~~iv~vsS~~~~~~~~~~~~~~~  181 (302)
                      .||.+|++||+||+.       +..+|++++.+|+.|..+-+..++|+|.++.  ..|-||++||..|..|.+..     
T Consensus        80 ~fg~iDIlINgAGi~-------~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~p~~-----  147 (261)
T KOG4169|consen   80 TFGTIDILINGAGIL-------DDKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDPMPVF-----  147 (261)
T ss_pred             HhCceEEEEcccccc-------cchhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCccccc-----
Confidence            999999999999995       4567999999999999999999999999985  56789999999999876553     


Q ss_pred             ccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHH--ccCCCcEEEEeecCcccCCCC
Q 022103          182 ILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKR--YEGEGISVNSYCPGFTQTSMT  259 (302)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e--~~~~gI~V~~v~PG~v~T~~~  259 (302)
                                                           ..|++||+++.+|+|+||.+  |.+.||++++||||++.|.+.
T Consensus       148 -------------------------------------pVY~AsKaGVvgFTRSla~~ayy~~sGV~~~avCPG~t~t~l~  190 (261)
T KOG4169|consen  148 -------------------------------------PVYAASKAGVVGFTRSLADLAYYQRSGVRFNAVCPGFTRTDLA  190 (261)
T ss_pred             -------------------------------------hhhhhcccceeeeehhhhhhhhHhhcCEEEEEECCCcchHHHH
Confidence                                                 57999999999999999887  467799999999999999987


Q ss_pred             CCCC--------------------CCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          260 QGQG--------------------SHTADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       260 ~~~~--------------------~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                      .++.                    .-+|..++..++..++.    -.+|++|..+.+-
T Consensus       191 ~~~~~~~~~~e~~~~~~~~l~~~~~q~~~~~a~~~v~aiE~----~~NGaiw~v~~g~  244 (261)
T KOG4169|consen  191 ENIDASGGYLEYSDSIKEALERAPKQSPACCAINIVNAIEY----PKNGAIWKVDSGS  244 (261)
T ss_pred             HHHHhcCCcccccHHHHHHHHHcccCCHHHHHHHHHHHHhh----ccCCcEEEEecCc
Confidence            7651                    15677888888888763    2579999887653

>PRK06198 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.1e-31  Score=238.00  Aligned_cols=228  Identities=26%  Similarity=0.290  Sum_probs=197.7

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCE-EEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLT-VILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~-V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      +++|+++||||+++||+.+++.|+++|++ |++++|+.++......++.+.+.++.++.+|+++++++.++++.+.++++
T Consensus         4 ~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   83 (260)
T PRK06198          4 LDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFG   83 (260)
T ss_pred             CCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            67899999999999999999999999999 99999998888777777766666788899999999999999999999999


Q ss_pred             CccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccch
Q 022103          107 ALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILED  185 (302)
Q Consensus       107 ~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~  185 (302)
                      .+|++|||+|.... .+.+.+.+.++.++++|+.+++++++.+++.|.++...++||++||..+..+.+           
T Consensus        84 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~-----------  152 (260)
T PRK06198         84 RLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQP-----------  152 (260)
T ss_pred             CCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCCC-----------
Confidence            99999999997654 456789999999999999999999999999998764468999999988754321           


Q ss_pred             hhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCC----
Q 022103          186 EELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG----  261 (302)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~----  261 (302)
                                                     .+..|+++|+++++++++++.|+...||+|+.|+||+++|++...    
T Consensus       153 -------------------------------~~~~Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~~~  201 (260)
T PRK06198        153 -------------------------------FLAAYCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQRE  201 (260)
T ss_pred             -------------------------------CcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcchhhhhhh
Confidence                                           236799999999999999999999999999999999999986311    


Q ss_pred             -----------------C-CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          262 -----------------Q-GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       262 -----------------~-~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                                       . ...++++++..+.+++. +...+++|+++..++..+
T Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~-~~~~~~~G~~~~~~~~~~  255 (260)
T PRK06198        202 FHGAPDDWLEKAAATQPFGRLLDPDEVARAVAFLLS-DESGLMTGSVIDFDQSVW  255 (260)
T ss_pred             ccCCChHHHHHHhccCCccCCcCHHHHHHHHHHHcC-hhhCCccCceEeECCccc
Confidence                             0 12579999999999986 456689999999988754

>PRK06057 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.5e-31  Score=238.53  Aligned_cols=222  Identities=27%  Similarity=0.367  Sum_probs=190.4

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      +++|+++||||++|||.+++++|+++|++|++++|+..+.+...+++.     ..++.+|++++++++++++++.+.+++
T Consensus         5 ~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~-----~~~~~~D~~~~~~~~~~~~~~~~~~~~   79 (255)
T PRK06057          5 LAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVG-----GLFVPTDVTDEDAVNALFDTAAETYGS   79 (255)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC-----CcEEEeeCCCHHHHHHHHHHHHHHcCC
Confidence            789999999999999999999999999999999999877666555442     257899999999999999999998899


Q ss_pred             ccEEEEcCCCCCC---CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccc
Q 022103          108 LDILVNNAGVSFN---DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILE  184 (302)
Q Consensus       108 id~lv~~aG~~~~---~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~  184 (302)
                      +|++|||||....   .+.+.+.+.++..+++|+.+++++++.++|.|.++ ..++||++||..+..+..          
T Consensus        80 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~g~iv~~sS~~~~~g~~----------  148 (255)
T PRK06057         80 VDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQ-GKGSIINTASFVAVMGSA----------  148 (255)
T ss_pred             CCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHh-CCcEEEEEcchhhccCCC----------
Confidence            9999999997532   45677889999999999999999999999999876 468999999987654321          


Q ss_pred             hhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC--
Q 022103          185 DEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ--  262 (302)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~--  262 (302)
                                                     +++..|+++|++++.+++.++.++.++||+|++|+||.++|++....  
T Consensus       149 -------------------------------~~~~~Y~~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~  197 (255)
T PRK06057        149 -------------------------------TSQISYTASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQELFA  197 (255)
T ss_pred             -------------------------------CCCcchHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhhcc
Confidence                                           12467999999999999999999988899999999999999985432  


Q ss_pred             ----------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          263 ----------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       263 ----------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                                      ...+|++++..+.+++. +...+++|..+..++..
T Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~-~~~~~~~g~~~~~~~g~  247 (255)
T PRK06057        198 KDPERAARRLVHVPMGRFAEPEEIAAAVAFLAS-DDASFITASTFLVDGGI  247 (255)
T ss_pred             CCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC-ccccCccCcEEEECCCe
Confidence                            12568999999999887 56788999999888864

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=100.00  E-value=2.9e-31  Score=239.98  Aligned_cols=227  Identities=21%  Similarity=0.221  Sum_probs=181.2

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHcCCEEEEEecC-hhhHHHHHHHHhhC-CCceeEEEeeCCCHHHH----HHHHHHHHhh
Q 022103           31 TIAIVTGANKGIGFALVKRLAELGLTVILTARD-VERGQRAVESLSEK-GLPVNFFQLDVSDPSSI----EAFVSWFKSN  104 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~-~~~~~~~~~~l~~~-~~~~~~~~~Dlt~~~~~----~~~~~~~~~~  104 (302)
                      ++++||||++|||++++++|+++|++|++++|+ .++++...+.+... +.++.++.+|++|++++    +++++++.+.
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~   81 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA   81 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence            689999999999999999999999999988654 56677776666532 44677899999999855    5666666677


Q ss_pred             CCCccEEEEcCCCCCC-CCCCCCH-----------HHHHHHHHhhhhHHHHHHHHHhhhhhcCC-----CCCcEEEecCC
Q 022103          105 FAALDILVNNAGVSFN-DIYKNTV-----------EHAETVIRTNFYGAKLLTESLLPLFRRSP-----SKSRILNISSR  167 (302)
Q Consensus       105 ~g~id~lv~~aG~~~~-~~~~~~~-----------e~~~~~~~vn~~~~~~l~~~~~~~l~~~~-----~~~~iv~vsS~  167 (302)
                      ++.+|+||||||.... ++.+.+.           +.+.+++++|+.+++++++++++.|++..     ..++|++++|.
T Consensus        82 ~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~s~  161 (267)
T TIGR02685        82 FGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCDA  161 (267)
T ss_pred             cCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEehhh
Confidence            8999999999997533 3333333           35889999999999999999999986531     24679999988


Q ss_pred             CcccccccCcccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEE
Q 022103          168 LGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVN  247 (302)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~  247 (302)
                      .+..+.                                          +++.+|++||+|+++++++|+.|++++||+|+
T Consensus       162 ~~~~~~------------------------------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~  199 (267)
T TIGR02685       162 MTDQPL------------------------------------------LGFTMYTMAKHALEGLTRSAALELAPLQIRVN  199 (267)
T ss_pred             hccCCC------------------------------------------cccchhHHHHHHHHHHHHHHHHHHhhhCeEEE
Confidence            775432                                          22478999999999999999999999999999


Q ss_pred             EeecCcccCCCCCC------------C--CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcccCC
Q 022103          248 SYCPGFTQTSMTQG------------Q--GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVKS  300 (302)
Q Consensus       248 ~v~PG~v~T~~~~~------------~--~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~  300 (302)
                      +|+||+++|+....            .  ...+|+++++.+++++. +...+++|.++..++.+...
T Consensus       200 ~v~PG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~-~~~~~~~G~~~~v~gg~~~~  265 (267)
T TIGR02685       200 GVAPGLSLLPDAMPFEVQEDYRRKVPLGQREASAEQIADVVIFLVS-PKAKYITGTCIKVDGGLSLT  265 (267)
T ss_pred             EEecCCccCccccchhHHHHHHHhCCCCcCCCCHHHHHHHHHHHhC-cccCCcccceEEECCceecc
Confidence            99999987652211            1  23589999999999987 66778999999999887543

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK06182 short chain dehydrogenase; Validated

Probab=100.00  E-value=3.3e-31  Score=240.17  Aligned_cols=204  Identities=31%  Similarity=0.373  Sum_probs=176.5

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      +++|+++|||++||||++++++|+++|++|++++|+.+++++..    ..  .+.++.+|++|.++++++++++.+.+++
T Consensus         1 ~~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~----~~--~~~~~~~Dv~~~~~~~~~~~~~~~~~~~   74 (273)
T PRK06182          1 MQKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLA----SL--GVHPLSLDVTDEASIKAAVDTIIAEEGR   74 (273)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----hC--CCeEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence            35799999999999999999999999999999999987765432    22  4788999999999999999999999999


Q ss_pred             ccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchh
Q 022103          108 LDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDE  186 (302)
Q Consensus       108 id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~  186 (302)
                      +|+||||||.... ++.+.+.++++.++++|+.+++.+++.++|.|++. +.++||++||..+..+.+            
T Consensus        75 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~-~~g~iv~isS~~~~~~~~------------  141 (273)
T PRK06182         75 IDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQ-RSGRIINISSMGGKIYTP------------  141 (273)
T ss_pred             CCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhc-CCCEEEEEcchhhcCCCC------------
Confidence            9999999998644 56788999999999999999999999999999876 568999999987654322            


Q ss_pred             hhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC----
Q 022103          187 ELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ----  262 (302)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~----  262 (302)
                                                    ....|+++|+++++++++++.|+.++||+|+.|+||+++|++....    
T Consensus       142 ------------------------------~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~  191 (273)
T PRK06182        142 ------------------------------LGAWYHATKFALEGFSDALRLEVAPFGIDVVVIEPGGIKTEWGDIAADHL  191 (273)
T ss_pred             ------------------------------CccHhHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCcccccchhhhhhh
Confidence                                          1256999999999999999999999999999999999999975310    


Q ss_pred             ---------------------------CCCCHHHHHHHHHHHhhc
Q 022103          263 ---------------------------GSHTADEAADVGARLLLL  280 (302)
Q Consensus       263 ---------------------------~~~~~~~~a~~~~~l~~~  280 (302)
                                                 ...+|+++|..+++++..
T Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA~~i~~~~~~  236 (273)
T PRK06182        192 LKTSGNGAYAEQAQAVAASMRSTYGSGRLSDPSVIADAISKAVTA  236 (273)
T ss_pred             cccccccchHHHHHHHHHHHHHhhccccCCCHHHHHHHHHHHHhC
Confidence                                       124889999999999863

>PRK12742 oxidoreductase; Provisional

Probab=100.00  E-value=4.9e-31  Score=233.38  Aligned_cols=217  Identities=24%  Similarity=0.252  Sum_probs=179.3

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEec-ChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTAR-DVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r-~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      .+++|+++||||+||||+++|+.|+++|++|+++.| +.++.++..+++     .+.++.+|++|.+++.+++++    +
T Consensus         3 ~~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~-----~~~~~~~D~~~~~~~~~~~~~----~   73 (237)
T PRK12742          3 AFTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQET-----GATAVQTDSADRDAVIDVVRK----S   73 (237)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHh-----CCeEEecCCCCHHHHHHHHHH----h
Confidence            367899999999999999999999999999988876 444444443332     246788999999988877754    4


Q ss_pred             CCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccc
Q 022103          106 AALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILE  184 (302)
Q Consensus       106 g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~  184 (302)
                      +++|++|||||.... ...+.+.++|+.++++|+.+++.+++++.+.|.+   .++||++||..+....           
T Consensus        74 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~g~iv~isS~~~~~~~-----------  139 (237)
T PRK12742         74 GALDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPE---GGRIIIIGSVNGDRMP-----------  139 (237)
T ss_pred             CCCcEEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhc---CCeEEEEeccccccCC-----------
Confidence            789999999997643 4567889999999999999999999999999864   4899999997763110           


Q ss_pred             hhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC--
Q 022103          185 DEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ--  262 (302)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~--  262 (302)
                                                    .+++..|+++|++++.++++++.++.++||+|++|+||+++|++....  
T Consensus       140 ------------------------------~~~~~~Y~~sKaa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~~~~  189 (237)
T PRK12742        140 ------------------------------VAGMAAYAASKSALQGMARGLARDFGPRGITINVVQPGPIDTDANPANGP  189 (237)
T ss_pred             ------------------------------CCCCcchHHhHHHHHHHHHHHHHHHhhhCeEEEEEecCcccCCccccccH
Confidence                                          123478999999999999999999999999999999999999985432  


Q ss_pred             ------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          263 ------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       263 ------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                                  +..+|++++..+.+|+. +...+++|.++..++.+
T Consensus       190 ~~~~~~~~~~~~~~~~p~~~a~~~~~l~s-~~~~~~~G~~~~~dgg~  235 (237)
T PRK12742        190 MKDMMHSFMAIKRHGRPEEVAGMVAWLAG-PEASFVTGAMHTIDGAF  235 (237)
T ss_pred             HHHHHHhcCCCCCCCCHHHHHHHHHHHcC-cccCcccCCEEEeCCCc
Confidence                        12579999999999987 56778999999999874

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=5.7e-31  Score=235.56  Aligned_cols=229  Identities=27%  Similarity=0.357  Sum_probs=193.9

Q ss_pred             CcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecCh-hhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCc
Q 022103           30 ETIAIVTGANKGIGFALVKRLAELGLTVILTARDV-ERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAAL  108 (302)
Q Consensus        30 ~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~-~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~i  108 (302)
                      .|+++||||+||||.++++.|+++|++|++++|+. +..+...+.+...+.++.++.+|+++++++.++++++.+.++.+
T Consensus         2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (256)
T PRK12745          2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRI   81 (256)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence            37899999999999999999999999999999875 44455566665556678999999999999999999999999999


Q ss_pred             cEEEEcCCCCCC---CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCC-----CCcEEEecCCCcccccccCcccc
Q 022103          109 DILVNNAGVSFN---DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPS-----KSRILNISSRLGTLSKVRNPNIK  180 (302)
Q Consensus       109 d~lv~~aG~~~~---~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~-----~~~iv~vsS~~~~~~~~~~~~~~  180 (302)
                      |++|||+|....   ++.+.+.+++++.+++|+.+++++++++.+.|.++..     .++||++||..+..+...     
T Consensus        82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~-----  156 (256)
T PRK12745         82 DCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSPN-----  156 (256)
T ss_pred             CEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCCCC-----
Confidence            999999997532   4667889999999999999999999999999987632     467999999887654322     


Q ss_pred             cccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCC
Q 022103          181 SILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ  260 (302)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~  260 (302)
                                                           ...|+++|++++.++++++.++.++||+|++|+||+++|++..
T Consensus       157 -------------------------------------~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~  199 (256)
T PRK12745        157 -------------------------------------RGEYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTA  199 (256)
T ss_pred             -------------------------------------CcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCcccc
Confidence                                                 3679999999999999999999889999999999999998754


Q ss_pred             CC----------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcccCCC
Q 022103          261 GQ----------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVKSN  301 (302)
Q Consensus       261 ~~----------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~~  301 (302)
                      ..                ....+++++..+.+++. +...+.+|.+|..++....+.
T Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~~d~a~~i~~l~~-~~~~~~~G~~~~i~gg~~~~~  255 (256)
T PRK12745        200 PVTAKYDALIAKGLVPMPRWGEPEDVARAVAALAS-GDLPYSTGQAIHVDGGLSIPR  255 (256)
T ss_pred             ccchhHHhhhhhcCCCcCCCcCHHHHHHHHHHHhC-CcccccCCCEEEECCCeeccc
Confidence            32                12468999999998876 556678999999999876543

>PRK07904 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.2e-31  Score=238.38  Aligned_cols=208  Identities=18%  Similarity=0.205  Sum_probs=176.9

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcC-CEEEEEecChhh-HHHHHHHHhhCCC-ceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELG-LTVILTARDVER-GQRAVESLSEKGL-PVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G-~~V~l~~r~~~~-~~~~~~~l~~~~~-~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      ++++++||||++|||+++|++|+++| ++|++++|+.++ ++...+++.+.+. ++.++.+|++|.+++.++++++.+ +
T Consensus         7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~-~   85 (253)
T PRK07904          7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFA-G   85 (253)
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHh-c
Confidence            57899999999999999999999995 999999999886 7888888876543 688999999999999999999886 4


Q ss_pred             CCccEEEEcCCCCCCC-CCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccc
Q 022103          106 AALDILVNNAGVSFND-IYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILE  184 (302)
Q Consensus       106 g~id~lv~~aG~~~~~-~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~  184 (302)
                      +++|++|+|+|...+. ....+.+...+++++|+.+++.+++.++|.|.++ ..++||++||..+..+.+          
T Consensus        86 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~-~~~~iv~isS~~g~~~~~----------  154 (253)
T PRK07904         86 GDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQ-GFGQIIAMSSVAGERVRR----------  154 (253)
T ss_pred             CCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhc-CCceEEEEechhhcCCCC----------
Confidence            8999999999986432 1112445566789999999999999999999887 569999999987754321          


Q ss_pred             hhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCCC-
Q 022103          185 DEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQG-  263 (302)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~~-  263 (302)
                                                      +..+|++||+++..|+++|+.|+.++||+|++|+||+++|++..... 
T Consensus       155 --------------------------------~~~~Y~~sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~~~~~  202 (253)
T PRK07904        155 --------------------------------SNFVYGSTKAGLDGFYLGLGEALREYGVRVLVVRPGQVRTRMSAHAKE  202 (253)
T ss_pred             --------------------------------CCcchHHHHHHHHHHHHHHHHHHhhcCCEEEEEeeCceecchhccCCC
Confidence                                            23679999999999999999999999999999999999999877543 


Q ss_pred             ---CCCHHHHHHHHHHHhhc
Q 022103          264 ---SHTADEAADVGARLLLL  280 (302)
Q Consensus       264 ---~~~~~~~a~~~~~l~~~  280 (302)
                         ..+++++|..+...+..
T Consensus       203 ~~~~~~~~~~A~~i~~~~~~  222 (253)
T PRK07904        203 APLTVDKEDVAKLAVTAVAK  222 (253)
T ss_pred             CCCCCCHHHHHHHHHHHHHc
Confidence               36899999999999863

>PRK06194 hypothetical protein; Provisional

Probab=100.00  E-value=5.4e-31  Score=240.12  Aligned_cols=211  Identities=29%  Similarity=0.389  Sum_probs=183.5

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      .+++|++|||||+||||+++|++|+++|++|++++|+.+.+++..+++...+.++.++.+|++|.++++++++++.+.++
T Consensus         3 ~~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g   82 (287)
T PRK06194          3 DFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFG   82 (287)
T ss_pred             CCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            35689999999999999999999999999999999998888888888876666788999999999999999999999999


Q ss_pred             CccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCC-----CcEEEecCCCcccccccCcccc
Q 022103          107 ALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSK-----SRILNISSRLGTLSKVRNPNIK  180 (302)
Q Consensus       107 ~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~-----~~iv~vsS~~~~~~~~~~~~~~  180 (302)
                      ++|+||||||.... .+.+.+.++|+..+++|+.++++++++++|.|.++...     ++||++||..+..+.+      
T Consensus        83 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~------  156 (287)
T PRK06194         83 AVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAPP------  156 (287)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCC------
Confidence            99999999998754 46778999999999999999999999999999877432     7999999988875432      


Q ss_pred             cccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHcc--CCCcEEEEeecCcccCCC
Q 022103          181 SILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYE--GEGISVNSYCPGFTQTSM  258 (302)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~--~~gI~V~~v~PG~v~T~~  258 (302)
                                                          ++..|+++|++++.++++++.++.  ..+||++.|+||++.|+|
T Consensus       157 ------------------------------------~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~  200 (287)
T PRK06194        157 ------------------------------------AMGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGI  200 (287)
T ss_pred             ------------------------------------CCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCcc
Confidence                                                236799999999999999999986  357999999999999998


Q ss_pred             CCCC------------------------------CCCCHHHHHHHHHHHhh
Q 022103          259 TQGQ------------------------------GSHTADEAADVGARLLL  279 (302)
Q Consensus       259 ~~~~------------------------------~~~~~~~~a~~~~~l~~  279 (302)
                      ....                              +..+++++|..+...+.
T Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~dva~~i~~~~~  251 (287)
T PRK06194        201 WQSERNRPADLANTAPPTRSQLIAQAMSQKAVGSGKVTAEEVAQLVFDAIR  251 (287)
T ss_pred             ccccccCchhcccCccccchhhHHHHHHHhhhhccCCCHHHHHHHHHHHHH
Confidence            6432                              12478889998888764

>PRK06197 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.3e-31  Score=245.40  Aligned_cols=236  Identities=25%  Similarity=0.351  Sum_probs=187.4

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhC--CCceeEEEeeCCCHHHHHHHHHHHHh
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEK--GLPVNFFQLDVSDPSSIEAFVSWFKS  103 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dlt~~~~~~~~~~~~~~  103 (302)
                      .++++|+++||||++|||+++|++|+++|++|++++|+.++.+...+++.+.  +.++.++.+|++|.++++++++++.+
T Consensus        12 ~~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~   91 (306)
T PRK06197         12 PDQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRA   91 (306)
T ss_pred             ccCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHh
Confidence            4578999999999999999999999999999999999998888777777543  34678999999999999999999999


Q ss_pred             hCCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccc-cCcccccc
Q 022103          104 NFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKV-RNPNIKSI  182 (302)
Q Consensus       104 ~~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~-~~~~~~~~  182 (302)
                      .++++|+||||||..... .+.+.++++..+++|+.+++.+++.+++.|.+. ..++||++||..+..... ....    
T Consensus        92 ~~~~iD~li~nAg~~~~~-~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~-~~~~iV~vSS~~~~~~~~~~~~~----  165 (306)
T PRK06197         92 AYPRIDLLINNAGVMYTP-KQTTADGFELQFGTNHLGHFALTGLLLDRLLPV-PGSRVVTVSSGGHRIRAAIHFDD----  165 (306)
T ss_pred             hCCCCCEEEECCccccCC-CccCCCCcchhhhhhhHHHHHHHHHHHHHHhhC-CCCEEEEECCHHHhccCCCCccc----
Confidence            999999999999976443 446778899999999999999999999999876 468999999987543111 1000    


Q ss_pred             cchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEe--ecCcccCCCCC
Q 022103          183 LEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSY--CPGFTQTSMTQ  260 (302)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v--~PG~v~T~~~~  260 (302)
                                              ..|.  ..++++.+|++||++++.+++.+++++.+.|++|+++  +||+|+|+|.+
T Consensus       166 ------------------------~~~~--~~~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~~~  219 (306)
T PRK06197        166 ------------------------LQWE--RRYNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTELAR  219 (306)
T ss_pred             ------------------------cCcc--cCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCcccc
Confidence                                    0000  0123357899999999999999999998888877655  79999999977


Q ss_pred             CCC--------------CCCHHHHHHHHHHHhhcCCCCCCCcceeecCC
Q 022103          261 GQG--------------SHTADEAADVGARLLLLHPQQLPTAKFYIGLD  295 (302)
Q Consensus       261 ~~~--------------~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~  295 (302)
                      +..              ..++++.+...++++.  ..+..+|.+|..++
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~g~~~~~~~  266 (306)
T PRK06197        220 NLPRALRPVATVLAPLLAQSPEMGALPTLRAAT--DPAVRGGQYYGPDG  266 (306)
T ss_pred             cCcHHHHHHHHHHHhhhcCCHHHHHHHHHHHhc--CCCcCCCeEEccCc
Confidence            542              2456666666666655  23446899887664

>PRK05650 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.9e-31  Score=237.69  Aligned_cols=206  Identities=28%  Similarity=0.388  Sum_probs=184.9

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCccE
Q 022103           31 TIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDI  110 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id~  110 (302)
                      ++++||||+||||+++++.|+++|++|++++|+.+++++..+++...+.++.++.+|+++++++.++++++.+.++++|+
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~   80 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDV   80 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            47999999999999999999999999999999999999888888877778899999999999999999999999999999


Q ss_pred             EEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhhc
Q 022103          111 LVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELS  189 (302)
Q Consensus       111 lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~  189 (302)
                      ||||||.... .+.+.+.+++++++++|+.+++.+++.++|.|.+. ..++||++||..+..+.+               
T Consensus        81 lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~vsS~~~~~~~~---------------  144 (270)
T PRK05650         81 IVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQ-KSGRIVNIASMAGLMQGP---------------  144 (270)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhC-CCCEEEEECChhhcCCCC---------------
Confidence            9999998654 56788999999999999999999999999999876 568999999988765432               


Q ss_pred             HHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCCC------
Q 022103          190 EEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQG------  263 (302)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~~------  263 (302)
                                                 .+..|+++|+++++++++|+.|+.+.||+|++|+||+++|++.....      
T Consensus       145 ---------------------------~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~  197 (270)
T PRK05650        145 ---------------------------AMSSYNVAKAGVVALSETLLVELADDEIGVHVVCPSFFQTNLLDSFRGPNPAM  197 (270)
T ss_pred             ---------------------------CchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccccCcccccccCchhH
Confidence                                       23679999999999999999999989999999999999999866431      


Q ss_pred             -----------CCCHHHHHHHHHHHhh
Q 022103          264 -----------SHTADEAADVGARLLL  279 (302)
Q Consensus       264 -----------~~~~~~~a~~~~~l~~  279 (302)
                                 ..+++++|..++..+.
T Consensus       198 ~~~~~~~~~~~~~~~~~vA~~i~~~l~  224 (270)
T PRK05650        198 KAQVGKLLEKSPITAADIADYIYQQVA  224 (270)
T ss_pred             HHHHHHHhhcCCCCHHHHHHHHHHHHh
Confidence                       2578999999998886

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=100.00  E-value=8.6e-31  Score=232.53  Aligned_cols=223  Identities=28%  Similarity=0.303  Sum_probs=189.9

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChh-hHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCcc
Q 022103           31 TIAIVTGANKGIGFALVKRLAELGLTVILTARDVE-RGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALD  109 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~-~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id  109 (302)
                      |+++|||++++||+++|+.|+++|++|++++|+.. ..++....+...+.++.++.+|+++.+++.++++++.+.++++|
T Consensus         3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id   82 (245)
T PRK12824          3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPVD   82 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            68999999999999999999999999999999854 23333333333345788999999999999999999999999999


Q ss_pred             EEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhh
Q 022103          110 ILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEEL  188 (302)
Q Consensus       110 ~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  188 (302)
                      ++|||+|.... .+.+.+.++|+.++++|+.+++++++++++.|++. ..++||++||..+..+.+              
T Consensus        83 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~iss~~~~~~~~--------------  147 (245)
T PRK12824         83 ILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQ-GYGRIINISSVNGLKGQF--------------  147 (245)
T ss_pred             EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHh-CCeEEEEECChhhccCCC--------------
Confidence            99999997654 46778999999999999999999999999999876 568999999987764322              


Q ss_pred             cHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC------
Q 022103          189 SEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ------  262 (302)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~------  262 (302)
                                                  ++..|+++|++++.+++.++.++.+.||+|++|+||.++|++.+..      
T Consensus       148 ----------------------------~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~  199 (245)
T PRK12824        148 ----------------------------GQTNYSAAKAGMIGFTKALASEGARYGITVNCIAPGYIATPMVEQMGPEVLQ  199 (245)
T ss_pred             ----------------------------CChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEEcccCCcchhhcCHHHHH
Confidence                                        2367999999999999999999988999999999999999986532      


Q ss_pred             ---------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          263 ---------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       263 ---------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                               ...++++++..+.+++. +....++|..+..++.+
T Consensus       200 ~~~~~~~~~~~~~~~~va~~~~~l~~-~~~~~~~G~~~~~~~g~  242 (245)
T PRK12824        200 SIVNQIPMKRLGTPEEIAAAVAFLVS-EAAGFITGETISINGGL  242 (245)
T ss_pred             HHHhcCCCCCCCCHHHHHHHHHHHcC-ccccCccCcEEEECCCe
Confidence                     12578999999999985 45667899999998875

>PRK12746 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-30  Score=233.65  Aligned_cols=224  Identities=29%  Similarity=0.397  Sum_probs=190.0

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEE-ecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC-
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILT-ARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF-  105 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~-~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~-  105 (302)
                      +++++++||||+||||+++|+.|+++|++|++. .|+.+++++..+.+...+.++.++.+|++|++++.++++++.+++ 
T Consensus         4 ~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~   83 (254)
T PRK12746          4 LDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQ   83 (254)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhc
Confidence            678999999999999999999999999998774 788877777777776555678899999999999999999998876 


Q ss_pred             -----CCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCccc
Q 022103          106 -----AALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNI  179 (302)
Q Consensus       106 -----g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~  179 (302)
                           +++|++|||||.... .+.+.+.+.++.++++|+.+++++++.+++.|.+.   +++|++||..+..+.      
T Consensus        84 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~---~~~v~~sS~~~~~~~------  154 (254)
T PRK12746         84 IRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAE---GRVINISSAEVRLGF------  154 (254)
T ss_pred             cccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcC---CEEEEECCHHhcCCC------
Confidence                 479999999997644 45678899999999999999999999999998643   799999998775432      


Q ss_pred             ccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCC
Q 022103          180 KSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMT  259 (302)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~  259 (302)
                                                          +++..|++||++++.+++++++++.+.||+|+.|+||+++|++.
T Consensus       155 ------------------------------------~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~  198 (254)
T PRK12746        155 ------------------------------------TGSIAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDIN  198 (254)
T ss_pred             ------------------------------------CCCcchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcch
Confidence                                                22467999999999999999999988999999999999999986


Q ss_pred             CCCC-----------------CCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          260 QGQG-----------------SHTADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       260 ~~~~-----------------~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                      ....                 ...+++++..+.+++. ++...++|..|..++..
T Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~-~~~~~~~g~~~~i~~~~  252 (254)
T PRK12746        199 AKLLDDPEIRNFATNSSVFGRIGQVEDIADAVAFLAS-SDSRWVTGQIIDVSGGF  252 (254)
T ss_pred             hhhccChhHHHHHHhcCCcCCCCCHHHHHHHHHHHcC-cccCCcCCCEEEeCCCc
Confidence            4321                 1478999999988876 45566789888887764

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=8.9e-33  Score=228.42  Aligned_cols=223  Identities=25%  Similarity=0.199  Sum_probs=194.8

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      -++.|+++++||++-|||+++++.|++.|++|+++.|+++.++..++++.   ..+.++..|+++++.+.+.+..+    
T Consensus         3 t~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~p---~~I~Pi~~Dls~wea~~~~l~~v----   75 (245)
T KOG1207|consen    3 TSLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKETP---SLIIPIVGDLSAWEALFKLLVPV----   75 (245)
T ss_pred             ccccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhCC---cceeeeEecccHHHHHHHhhccc----
Confidence            35789999999999999999999999999999999999999999988775   35899999999988766555543    


Q ss_pred             CCccEEEEcCCCCC-CCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccc
Q 022103          106 AALDILVNNAGVSF-NDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILE  184 (302)
Q Consensus       106 g~id~lv~~aG~~~-~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~  184 (302)
                      +.+|.+|||||+.. .++.+++.|++++.|++|+.+.+++.|...+-+..+..+|.||++||.++..+...         
T Consensus        76 ~pidgLVNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~R~~~n---------  146 (245)
T KOG1207|consen   76 FPIDGLVNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASIRPLDN---------  146 (245)
T ss_pred             CchhhhhccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhcccccCC---------
Confidence            78999999999874 47899999999999999999999999997776655557789999999998766433         


Q ss_pred             hhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC--
Q 022103          185 DEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ--  262 (302)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~--  262 (302)
                                                       ...|+++|+|+++++|+||.|+++++||||+|.|-.+.|.|-++.  
T Consensus       147 ---------------------------------HtvYcatKaALDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~dnWS  193 (245)
T KOG1207|consen  147 ---------------------------------HTVYCATKAALDMLTKCLALELGPQKIRVNSVNPTVVMTDMGRDNWS  193 (245)
T ss_pred             ---------------------------------ceEEeecHHHHHHHHHHHHHhhCcceeEeeccCCeEEEecccccccC
Confidence                                             378999999999999999999999999999999999999997653  


Q ss_pred             ---------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          263 ---------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       263 ---------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                                     ++...+++.+++.+|++ +.....+|..+..+|+|.
T Consensus       194 DP~K~k~mL~riPl~rFaEV~eVVnA~lfLLS-d~ssmttGstlpveGGfs  243 (245)
T KOG1207|consen  194 DPDKKKKMLDRIPLKRFAEVDEVVNAVLFLLS-DNSSMTTGSTLPVEGGFS  243 (245)
T ss_pred             CchhccchhhhCchhhhhHHHHHHhhheeeee-cCcCcccCceeeecCCcc
Confidence                           12557999999999998 677779999999999885

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=100.00  E-value=1.3e-30  Score=230.99  Aligned_cols=223  Identities=29%  Similarity=0.335  Sum_probs=192.2

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHcCCEEEEEec-ChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCcc
Q 022103           31 TIAIVTGANKGIGFALVKRLAELGLTVILTAR-DVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALD  109 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~G~~V~l~~r-~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id  109 (302)
                      |+++||||++|||++++++|+++|++|+++.| +.++.++..+++...+.++.++.+|+++++++.++++++.+.++.+|
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPID   80 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCc
Confidence            68999999999999999999999999999888 66666666666655556788999999999999999999999999999


Q ss_pred             EEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhh
Q 022103          110 ILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEEL  188 (302)
Q Consensus       110 ~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  188 (302)
                      +||||+|.... .+.+.+.++++..+++|+.+++.+++++++.|++. ..++||++||..+..+..              
T Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~iss~~~~~~~~--------------  145 (242)
T TIGR01829        81 VLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRER-GWGRIINISSVNGQKGQF--------------  145 (242)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEEcchhhcCCCC--------------
Confidence            99999997654 45678999999999999999999999999999876 568999999987764432              


Q ss_pred             cHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC------
Q 022103          189 SEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ------  262 (302)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~------  262 (302)
                                                  ++..|+++|++++.++++++.++.+.||+++.|+||++.|++....      
T Consensus       146 ----------------------------~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~  197 (242)
T TIGR01829       146 ----------------------------GQTNYSAAKAGMIGFTKALAQEGATKGVTVNTISPGYIATDMVMAMREDVLN  197 (242)
T ss_pred             ----------------------------CcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCCCcCccccccchHHHH
Confidence                                        2367999999999999999999988899999999999999986542      


Q ss_pred             ---------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          263 ---------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       263 ---------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                               ...+|++++..+.+++. ++..+++|+++..++..
T Consensus       198 ~~~~~~~~~~~~~~~~~a~~~~~l~~-~~~~~~~G~~~~~~gg~  240 (242)
T TIGR01829       198 SIVAQIPVGRLGRPEEIAAAVAFLAS-EEAGYITGATLSINGGL  240 (242)
T ss_pred             HHHhcCCCCCCcCHHHHHHHHHHHcC-chhcCccCCEEEecCCc
Confidence                     12678999999988876 45567899999998875

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.4e-30  Score=232.47  Aligned_cols=225  Identities=27%  Similarity=0.383  Sum_probs=193.9

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCC-CceeEEEeeCC--CHHHHHHHHHHHHh
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKG-LPVNFFQLDVS--DPSSIEAFVSWFKS  103 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dlt--~~~~~~~~~~~~~~  103 (302)
                      .+++|+++|||++++||.++++.|++.|++|++++|+.++.++..+++.+.+ .++.++.+|++  ++++++++++.+.+
T Consensus         9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   88 (247)
T PRK08945          9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEE   88 (247)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999999988888877776544 35677778886  78999999999999


Q ss_pred             hCCCccEEEEcCCCCCC--CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCccccc
Q 022103          104 NFAALDILVNNAGVSFN--DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKS  181 (302)
Q Consensus       104 ~~g~id~lv~~aG~~~~--~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~  181 (302)
                      .++++|+||||||....  ++.+.+.+++++.+++|+.++++++++++++|.+. +.++||++||..+..+..       
T Consensus        89 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~-~~~~iv~~ss~~~~~~~~-------  160 (247)
T PRK08945         89 QFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKS-PAASLVFTSSSVGRQGRA-------  160 (247)
T ss_pred             HhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhC-CCCEEEEEccHhhcCCCC-------
Confidence            99999999999997533  46678899999999999999999999999999887 568999999987764432       


Q ss_pred             ccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCC
Q 022103          182 ILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG  261 (302)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~  261 (302)
                                                         ++.+|++||++++.+++.++.++...||++++|+||.+.|++...
T Consensus       161 -----------------------------------~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~~  205 (247)
T PRK08945        161 -----------------------------------NWGAYAVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRAS  205 (247)
T ss_pred             -----------------------------------CCcccHHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchhh
Confidence                                               236799999999999999999998899999999999999987543


Q ss_pred             C-------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCC
Q 022103          262 Q-------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLD  295 (302)
Q Consensus       262 ~-------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~  295 (302)
                      .       ...+|+++++.+.+++. +....++|+++....
T Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~  245 (247)
T PRK08945        206 AFPGEDPQKLKTPEDIMPLYLYLMG-DDSRRKNGQSFDAQP  245 (247)
T ss_pred             hcCcccccCCCCHHHHHHHHHHHhC-ccccccCCeEEeCCC
Confidence            2       23678999999999986 667789999987653

>PRK07832 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.7e-31  Score=237.11  Aligned_cols=207  Identities=26%  Similarity=0.338  Sum_probs=180.5

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCc-eeEEEeeCCCHHHHHHHHHHHHhhCCCcc
Q 022103           31 TIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLP-VNFFQLDVSDPSSIEAFVSWFKSNFAALD  109 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~-~~~~~~Dlt~~~~~~~~~~~~~~~~g~id  109 (302)
                      |+++||||++|||+++++.|+++|++|++++|+.+.+++..+++...+.. +.++.+|+++++++.++++++.+.++++|
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMD   80 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence            57999999999999999999999999999999998888888877655544 45678999999999999999999999999


Q ss_pred             EEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhh
Q 022103          110 ILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEEL  188 (302)
Q Consensus       110 ~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  188 (302)
                      +||||+|.... .+.+.+.++++..+++|+.+++.++++++|.|.+.+..++||++||..+..+.               
T Consensus        81 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~---------------  145 (272)
T PRK07832         81 VVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVAL---------------  145 (272)
T ss_pred             EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCCC---------------
Confidence            99999997533 56788999999999999999999999999999775446899999998765432               


Q ss_pred             cHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC------
Q 022103          189 SEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ------  262 (302)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~------  262 (302)
                                                 +++.+|+++|+++++++++++.|+.++||+|+.|+||.++|++....      
T Consensus       146 ---------------------------~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~  198 (272)
T PRK07832        146 ---------------------------PWHAAYSASKFGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIAGVD  198 (272)
T ss_pred             ---------------------------CCCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhcccccccC
Confidence                                       22467999999999999999999988999999999999999985431      


Q ss_pred             ---------------CCCCHHHHHHHHHHHhh
Q 022103          263 ---------------GSHTADEAADVGARLLL  279 (302)
Q Consensus       263 ---------------~~~~~~~~a~~~~~l~~  279 (302)
                                     ...+|+++|..+++++.
T Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~vA~~~~~~~~  230 (272)
T PRK07832        199 REDPRVQKWVDRFRGHAVTPEKAAEKILAGVE  230 (272)
T ss_pred             cchhhHHHHHHhcccCCCCHHHHHHHHHHHHh
Confidence                           13689999999999986

>PRK05875 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-30  Score=235.97  Aligned_cols=228  Identities=19%  Similarity=0.206  Sum_probs=194.8

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhC--CCceeEEEeeCCCHHHHHHHHHHHHhh
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEK--GLPVNFFQLDVSDPSSIEAFVSWFKSN  104 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dlt~~~~~~~~~~~~~~~  104 (302)
                      .+++|+++|||++|+||+++++.|+++|++|++++|+.++.+...+++...  +.++.++.+|++|++++.++++++.++
T Consensus         4 ~~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   83 (276)
T PRK05875          4 SFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAW   83 (276)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            377899999999999999999999999999999999988877777776543  246788999999999999999999999


Q ss_pred             CCCccEEEEcCCCCC--CCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccc
Q 022103          105 FAALDILVNNAGVSF--NDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSI  182 (302)
Q Consensus       105 ~g~id~lv~~aG~~~--~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~  182 (302)
                      ++++|++|||||...  .++.+.+.++++.++++|+.+++.+++++++.|.+. ..++|+++||..+..+.         
T Consensus        84 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~~sS~~~~~~~---------  153 (276)
T PRK05875         84 HGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRG-GGGSFVGISSIAASNTH---------  153 (276)
T ss_pred             cCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEEechhhcCCC---------
Confidence            999999999999653  245678899999999999999999999999999876 46899999998775332         


Q ss_pred             cchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC
Q 022103          183 LEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ  262 (302)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~  262 (302)
                                                       +++.+|+++|++++.+++.++.++...+|+|+.|+||+++|++....
T Consensus       154 ---------------------------------~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~  200 (276)
T PRK05875        154 ---------------------------------RWFGAYGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPI  200 (276)
T ss_pred             ---------------------------------CCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCcccccc
Confidence                                             12478999999999999999999999999999999999999886432


Q ss_pred             C-----------------CCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          263 G-----------------SHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       263 ~-----------------~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                      .                 ...+++++..+.+++. .+...++|.++..++...
T Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~-~~~~~~~g~~~~~~~g~~  252 (276)
T PRK05875        201 TESPELSADYRACTPLPRVGEVEDVANLAMFLLS-DAASWITGQVINVDGGHM  252 (276)
T ss_pred             ccCHHHHHHHHcCCCCCCCcCHHHHHHHHHHHcC-chhcCcCCCEEEECCCee
Confidence            1                 1367999999999987 455668899998887654

>PRK05993 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.4e-31  Score=239.63  Aligned_cols=202  Identities=26%  Similarity=0.343  Sum_probs=174.5

Q ss_pred             CcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC-CCc
Q 022103           30 ETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF-AAL  108 (302)
Q Consensus        30 ~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~-g~i  108 (302)
                      +|+++||||+||||+++|+.|+++|++|++++|+.+++++..+    .  .+.++.+|++|.++++++++++.+.+ +.+
T Consensus         4 ~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~----~--~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~i   77 (277)
T PRK05993          4 KRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEA----E--GLEAFQLDYAEPESIAALVAQVLELSGGRL   77 (277)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----C--CceEEEccCCCHHHHHHHHHHHHHHcCCCc
Confidence            5899999999999999999999999999999999877654432    2  46788999999999999999997765 689


Q ss_pred             cEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhh
Q 022103          109 DILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEE  187 (302)
Q Consensus       109 d~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~  187 (302)
                      |++|||||.... .+.+.+.++++.++++|+.|++.+++.++|.|.++ ..++||++||..+..+.+             
T Consensus        78 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~-~~g~iv~isS~~~~~~~~-------------  143 (277)
T PRK05993         78 DALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQ-GQGRIVQCSSILGLVPMK-------------  143 (277)
T ss_pred             cEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhc-CCCEEEEECChhhcCCCC-------------
Confidence            999999997654 56778999999999999999999999999999877 568999999988764422             


Q ss_pred             hcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC-----
Q 022103          188 LSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ-----  262 (302)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~-----  262 (302)
                                                   +...|++||+++++++++|+.|+.++||+|++|+||+++|+|..+.     
T Consensus       144 -----------------------------~~~~Y~asK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~~~~~~~~~~~  194 (277)
T PRK05993        144 -----------------------------YRGAYNASKFAIEGLSLTLRMELQGSGIHVSLIEPGPIETRFRANALAAFK  194 (277)
T ss_pred             -----------------------------ccchHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCCccCchhhHHHHHHh
Confidence                                         2368999999999999999999999999999999999999986531     


Q ss_pred             -----------------------------CCCCHHHHHHHHHHHhhc
Q 022103          263 -----------------------------GSHTADEAADVGARLLLL  280 (302)
Q Consensus       263 -----------------------------~~~~~~~~a~~~~~l~~~  280 (302)
                                                   ...+|+++|..+.+.+..
T Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~i~~a~~~  241 (277)
T PRK05993        195 RWIDIENSVHRAAYQQQMARLEGGGSKSRFKLGPEAVYAVLLHALTA  241 (277)
T ss_pred             hhhccccchhHHHHHHHHHHHHhhhhccccCCCHHHHHHHHHHHHcC
Confidence                                         125789999999988763

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=100.00  E-value=1.6e-30  Score=241.56  Aligned_cols=259  Identities=22%  Similarity=0.248  Sum_probs=190.9

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      .+++|+++||||++|||+++++.|+++|++|++++|+.++.+...+++...+.++.++.+|+++.++++++++++.+.++
T Consensus         3 ~~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   82 (322)
T PRK07453          3 QDAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGK   82 (322)
T ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCC
Confidence            35689999999999999999999999999999999999988888888765455788999999999999999999888778


Q ss_pred             CccEEEEcCCCCCC--CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCC-CCcEEEecCCCcccccccCccccccc
Q 022103          107 ALDILVNNAGVSFN--DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPS-KSRILNISSRLGTLSKVRNPNIKSIL  183 (302)
Q Consensus       107 ~id~lv~~aG~~~~--~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~-~~~iv~vsS~~~~~~~~~~~~~~~~~  183 (302)
                      ++|+||||||+...  ...+.+.++++.++++|+.|++++++.++|.|++++. .+|||++||...........    ..
T Consensus        83 ~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~----~~  158 (322)
T PRK07453         83 PLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGK----IP  158 (322)
T ss_pred             CccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCc----cC
Confidence            99999999997643  2346788999999999999999999999999987632 36999999987643211000    00


Q ss_pred             chhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHcc-CCCcEEEEeecCcc-cCCCCCC
Q 022103          184 EDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYE-GEGISVNSYCPGFT-QTSMTQG  261 (302)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~-~~gI~V~~v~PG~v-~T~~~~~  261 (302)
                      .+.......+..|...+   ..+..+.+...+.++.+|+.||++++.+++.|++++. ..||+|++|+||.| .|++.++
T Consensus       159 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~  235 (322)
T PRK07453        159 IPAPADLGDLSGFEAGF---KAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADTPLFRN  235 (322)
T ss_pred             CCCccchhhhhcchhcc---cccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCCccccc
Confidence            00000000000000000   0001111112234467899999999999999999984 46999999999999 5888655


Q ss_pred             CC-----------------CCCHHHHHHHHHHHhhcCCCCCCCcceeec
Q 022103          262 QG-----------------SHTADEAADVGARLLLLHPQQLPTAKFYIG  293 (302)
Q Consensus       262 ~~-----------------~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~  293 (302)
                      ..                 ..++++.+..+++++..+. ...+|.||.+
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~G~y~~~  283 (322)
T PRK07453        236 TPPLFQKLFPWFQKNITGGYVSQELAGERVAQVVADPE-FAQSGVHWSW  283 (322)
T ss_pred             CCHHHHHHHHHHHHHHhhceecHHHHhhHHHHhhcCcc-cCCCCceeec
Confidence            21                 2456677777777766433 3479999974

>PRK09072 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-30  Score=235.08  Aligned_cols=209  Identities=24%  Similarity=0.373  Sum_probs=183.8

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      .+++++++||||+||||++++++|+++|++|++++|+.+++++..+++ +.+.++.++.+|++|.+++.++++.+.+ ++
T Consensus         2 ~~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~d~~~~~~~~~~~~~-~~   79 (263)
T PRK09072          2 DLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARL-PYPGRHRWVVADLTSEAGREAVLARARE-MG   79 (263)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH-hcCCceEEEEccCCCHHHHHHHHHHHHh-cC
Confidence            467899999999999999999999999999999999998888887777 4456788999999999999999999876 78


Q ss_pred             CccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccch
Q 022103          107 ALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILED  185 (302)
Q Consensus       107 ~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~  185 (302)
                      .+|++|||||.... ++.+.+.+++++++++|+.+++++++.++++|.++ +.++||++||..+..+.+.          
T Consensus        80 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-~~~~iv~isS~~~~~~~~~----------  148 (263)
T PRK09072         80 GINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQ-PSAMVVNVGSTFGSIGYPG----------  148 (263)
T ss_pred             CCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-CCCEEEEecChhhCcCCCC----------
Confidence            99999999997644 56778999999999999999999999999999876 4689999999887655322          


Q ss_pred             hhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC---
Q 022103          186 EELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ---  262 (302)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~---  262 (302)
                                                      ...|+++|++++.++++++.++.+.||+|+.|+||+++|++....   
T Consensus       149 --------------------------------~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~~~~~~  196 (263)
T PRK09072        149 --------------------------------YASYCASKFALRGFSEALRRELADTGVRVLYLAPRATRTAMNSEAVQA  196 (263)
T ss_pred             --------------------------------ccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccccchhhhccc
Confidence                                            367999999999999999999999999999999999999985431   


Q ss_pred             -------CCCCHHHHHHHHHHHhhc
Q 022103          263 -------GSHTADEAADVGARLLLL  280 (302)
Q Consensus       263 -------~~~~~~~~a~~~~~l~~~  280 (302)
                             ...+++++|..+++++..
T Consensus       197 ~~~~~~~~~~~~~~va~~i~~~~~~  221 (263)
T PRK09072        197 LNRALGNAMDDPEDVAAAVLQAIEK  221 (263)
T ss_pred             ccccccCCCCCHHHHHHHHHHHHhC
Confidence                   236899999999999874

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.98  E-value=2.2e-30  Score=230.75  Aligned_cols=225  Identities=27%  Similarity=0.313  Sum_probs=193.1

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      .+++++++|||+++|||.++++.|+++|++|++++|+.++++...+++...+.++.++.+|+++.++++++++++.+.++
T Consensus         2 ~~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (253)
T PRK08217          2 DLKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFG   81 (253)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            36799999999999999999999999999999999999888888888877677889999999999999999999988888


Q ss_pred             CccEEEEcCCCCCCC---------C-CCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccC
Q 022103          107 ALDILVNNAGVSFND---------I-YKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRN  176 (302)
Q Consensus       107 ~id~lv~~aG~~~~~---------~-~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~  176 (302)
                      .+|+||||+|.....         + .+.+.+.++.++++|+.+++.+++.+.+.|.+....++|+++||... .+.   
T Consensus        82 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~~-~~~---  157 (253)
T PRK08217         82 QLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIAR-AGN---  157 (253)
T ss_pred             CCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEccccc-cCC---
Confidence            999999999964321         1 56688999999999999999999999999976645578999988643 221   


Q ss_pred             cccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccC
Q 022103          177 PNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQT  256 (302)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T  256 (302)
                                                             +++..|+++|++++.++++|+.++.++||++++|+||.++|
T Consensus       158 ---------------------------------------~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t  198 (253)
T PRK08217        158 ---------------------------------------MGQTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIET  198 (253)
T ss_pred             ---------------------------------------CCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcC
Confidence                                                   22478999999999999999999988899999999999999


Q ss_pred             CCCCCC---------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          257 SMTQGQ---------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       257 ~~~~~~---------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                      ++.+..               ...++++++..+.+++.   ..+++|..+..++..
T Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~---~~~~~g~~~~~~gg~  251 (253)
T PRK08217        199 EMTAAMKPEALERLEKMIPVGRLGEPEEIAHTVRFIIE---NDYVTGRVLEIDGGL  251 (253)
T ss_pred             ccccccCHHHHHHHHhcCCcCCCcCHHHHHHHHHHHHc---CCCcCCcEEEeCCCc
Confidence            986542               12478999999999985   246899999988865

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.98  E-value=2.3e-30  Score=229.79  Aligned_cols=210  Identities=28%  Similarity=0.358  Sum_probs=186.1

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      +++++++|||++++||++++++|+++|++|++++|+.++.++..+++...+.++.++.+|+++++++.++++++.+.+++
T Consensus         5 ~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   84 (239)
T PRK07666          5 LQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGS   84 (239)
T ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            56899999999999999999999999999999999998888888888766668899999999999999999999999999


Q ss_pred             ccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchh
Q 022103          108 LDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDE  186 (302)
Q Consensus       108 id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~  186 (302)
                      +|++|||+|.... .+.+.+.+++++.+++|+.+++++++.+.+.|.++ ..+++|++||..+..+..            
T Consensus        85 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~~ss~~~~~~~~------------  151 (239)
T PRK07666         85 IDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIER-QSGDIINISSTAGQKGAA------------  151 (239)
T ss_pred             ccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCcEEEEEcchhhccCCC------------
Confidence            9999999997643 46678899999999999999999999999999876 568999999988765432            


Q ss_pred             hhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC----
Q 022103          187 ELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ----  262 (302)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~----  262 (302)
                                                    ++..|+.+|++++.+++.++.++.+.||+|+.|+||.+.|++....    
T Consensus       152 ------------------------------~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~  201 (239)
T PRK07666        152 ------------------------------VTSAYSASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDMAVDLGLTD  201 (239)
T ss_pred             ------------------------------CCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCcchhhccccc
Confidence                                          2367999999999999999999988999999999999999985532    


Q ss_pred             ----CCCCHHHHHHHHHHHhhc
Q 022103          263 ----GSHTADEAADVGARLLLL  280 (302)
Q Consensus       263 ----~~~~~~~~a~~~~~l~~~  280 (302)
                          ...+++++|+.+..++..
T Consensus       202 ~~~~~~~~~~~~a~~~~~~l~~  223 (239)
T PRK07666        202 GNPDKVMQPEDLAEFIVAQLKL  223 (239)
T ss_pred             cCCCCCCCHHHHHHHHHHHHhC
Confidence                236899999999999874

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.98  E-value=2.3e-30  Score=229.87  Aligned_cols=227  Identities=33%  Similarity=0.356  Sum_probs=198.6

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEE-ecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILT-ARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~-~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      .+.+|+++||||+|+||.++++.|+++|++|+++ +|+.++.+...+.+...+.++.++.+|++++++++++++++.+.+
T Consensus         2 ~~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (247)
T PRK05565          2 KLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKF   81 (247)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            3668899999999999999999999999999999 999888887777776666678999999999999999999999989


Q ss_pred             CCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccc
Q 022103          106 AALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILE  184 (302)
Q Consensus       106 g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~  184 (302)
                      +.+|++||++|.... .+.+.+.+++++.+++|+.+++++++.+.+.+.++ ..+++|++||..+..+.+.         
T Consensus        82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~~v~~sS~~~~~~~~~---------  151 (247)
T PRK05565         82 GKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKR-KSGVIVNISSIWGLIGASC---------  151 (247)
T ss_pred             CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEECCHhhccCCCC---------
Confidence            999999999997643 45678899999999999999999999999999876 4689999999877654322         


Q ss_pred             hhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCCC-
Q 022103          185 DEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQG-  263 (302)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~~-  263 (302)
                                                       +.+|+.+|++++.++++++.++...||++++|+||+++|++.+... 
T Consensus       152 ---------------------------------~~~y~~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~~~  198 (247)
T PRK05565        152 ---------------------------------EVLYSASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSSFSE  198 (247)
T ss_pred             ---------------------------------ccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCccccccCh
Confidence                                             3679999999999999999999888999999999999998866432 


Q ss_pred             --------------CCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          264 --------------SHTADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       264 --------------~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                                    ..++++++..+++++. .....++|+++..++.+
T Consensus       199 ~~~~~~~~~~~~~~~~~~~~va~~~~~l~~-~~~~~~~g~~~~~~~~~  245 (247)
T PRK05565        199 EDKEGLAEEIPLGRLGKPEEIAKVVLFLAS-DDASYITGQIITVDGGW  245 (247)
T ss_pred             HHHHHHHhcCCCCCCCCHHHHHHHHHHHcC-CccCCccCcEEEecCCc
Confidence                          2578999999999987 56778999999988874

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=99.98  E-value=7.6e-31  Score=222.29  Aligned_cols=184  Identities=32%  Similarity=0.502  Sum_probs=167.4

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      .+.|-|+|||||++|||+++|++|.+.|-+|++++|+.++++++.++.    ..+..+.||+.|.++.+++++++.++++
T Consensus         2 k~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~----p~~~t~v~Dv~d~~~~~~lvewLkk~~P   77 (245)
T COG3967           2 KTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAEN----PEIHTEVCDVADRDSRRELVEWLKKEYP   77 (245)
T ss_pred             cccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcC----cchheeeecccchhhHHHHHHHHHhhCC
Confidence            467899999999999999999999999999999999999988887765    4688999999999999999999999999


Q ss_pred             CccEEEEcCCCCCC-CC--CCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCccccccc
Q 022103          107 ALDILVNNAGVSFN-DI--YKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSIL  183 (302)
Q Consensus       107 ~id~lv~~aG~~~~-~~--~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~  183 (302)
                      .+++||||||++.+ .+  .+...++.++.+.+|+.++..+++.++|++.++ ..+.||+|||..+..|....       
T Consensus        78 ~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q-~~a~IInVSSGLafvPm~~~-------  149 (245)
T COG3967          78 NLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQ-PEATIINVSSGLAFVPMAST-------  149 (245)
T ss_pred             chheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhC-CCceEEEeccccccCccccc-------
Confidence            99999999999865 33  445677889999999999999999999999998 58999999999998776543       


Q ss_pred             chhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCC
Q 022103          184 EDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTS  257 (302)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~  257 (302)
                                                         ..|+++|+|++.|+.+|+.++...+|+|..+.|..|+|+
T Consensus       150 -----------------------------------PvYcaTKAaiHsyt~aLR~Qlk~t~veVIE~~PP~V~t~  188 (245)
T COG3967         150 -----------------------------------PVYCATKAAIHSYTLALREQLKDTSVEVIELAPPLVDTT  188 (245)
T ss_pred             -----------------------------------ccchhhHHHHHHHHHHHHHHhhhcceEEEEecCCceecC
Confidence                                               359999999999999999999888999999999999996

>PRK08263 short chain dehydrogenase; Provisional

Probab=99.98  E-value=2.6e-30  Score=234.69  Aligned_cols=218  Identities=31%  Similarity=0.350  Sum_probs=185.9

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCc
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAAL  108 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~i  108 (302)
                      .+|+++||||+||||++++++|+++|++|++++|+.++++...+.+   +..+..+.+|++|++++.++++++.+.++.+
T Consensus         2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (275)
T PRK08263          2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKY---GDRLLPLALDVTDRAAVFAAVETAVEHFGRL   78 (275)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc---cCCeeEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            4689999999999999999999999999999999988776655543   3467889999999999999999999999999


Q ss_pred             cEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhh
Q 022103          109 DILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEE  187 (302)
Q Consensus       109 d~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~  187 (302)
                      |++|||||.... ++.+.+.+++++++++|+.+++++++.++|.|++. +.++||++||..+..+.+.            
T Consensus        79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~vsS~~~~~~~~~------------  145 (275)
T PRK08263         79 DIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQ-RSGHIIQISSIGGISAFPM------------  145 (275)
T ss_pred             CEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCEEEEEcChhhcCCCCC------------
Confidence            999999998754 56778999999999999999999999999999876 5689999999887654322            


Q ss_pred             hcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC-----
Q 022103          188 LSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ-----  262 (302)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~-----  262 (302)
                                                    +..|+++|++++.+++.++.++.+.||+|+.|+||.++|++....     
T Consensus       146 ------------------------------~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~  195 (275)
T PRK08263        146 ------------------------------SGIYHASKWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRAT  195 (275)
T ss_pred             ------------------------------ccHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCccCCccccccccCC
Confidence                                          367999999999999999999998999999999999999987310     


Q ss_pred             -------------------CC-CCHHHHHHHHHHHhhcCCCCCCCcceeecCC
Q 022103          263 -------------------GS-HTADEAADVGARLLLLHPQQLPTAKFYIGLD  295 (302)
Q Consensus       263 -------------------~~-~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~  295 (302)
                                         .. .+|++++..+++++.. +  ...+.+|...+
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~~~~l~~~-~--~~~~~~~~~~~  245 (275)
T PRK08263        196 PLDAYDTLREELAEQWSERSVDGDPEAAAEALLKLVDA-E--NPPLRLFLGSG  245 (275)
T ss_pred             CchhhhhHHHHHHHHHHhccCCCCHHHHHHHHHHHHcC-C--CCCeEEEeCch
Confidence                               12 5789999999999863 2  23566666554

>PRK12827 short chain dehydrogenase; Provisional

Probab=99.98  E-value=3.5e-30  Score=228.89  Aligned_cols=226  Identities=28%  Similarity=0.333  Sum_probs=191.9

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEec----ChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHh
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTAR----DVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKS  103 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r----~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~  103 (302)
                      +++++++||||+||||+++|+.|+++|++|++++|    +.+..+...+++...+.++.++.+|+++.++++++++++.+
T Consensus         4 ~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   83 (249)
T PRK12827          4 LDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVE   83 (249)
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            56789999999999999999999999999999765    34445555566666566889999999999999999999998


Q ss_pred             hCCCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHh-hhhhcCCCCCcEEEecCCCcccccccCccccc
Q 022103          104 NFAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLL-PLFRRSPSKSRILNISSRLGTLSKVRNPNIKS  181 (302)
Q Consensus       104 ~~g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~-~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~  181 (302)
                      .++.+|.+|||+|.... ++.+.+.++++..+++|+.+++.+++.+. +.++++ ..++||++||..+..+..       
T Consensus        84 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~iv~~sS~~~~~~~~-------  155 (249)
T PRK12827         84 EFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRAR-RGGRIVNIASVAGVRGNR-------  155 (249)
T ss_pred             HhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcC-CCeEEEEECCchhcCCCC-------
Confidence            88999999999998754 56778899999999999999999999999 666555 568999999988765432       


Q ss_pred             ccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCC
Q 022103          182 ILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG  261 (302)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~  261 (302)
                                                         ++..|+.+|++++.++++++.++.+.||++++|+||+++|++...
T Consensus       156 -----------------------------------~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~  200 (249)
T PRK12827        156 -----------------------------------GQVNYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADN  200 (249)
T ss_pred             -----------------------------------CCchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccc
Confidence                                               236799999999999999999998889999999999999998654


Q ss_pred             CC------------C-CCHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          262 QG------------S-HTADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       262 ~~------------~-~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                      ..            . .++++++..+.+++. .....++|+++..++++
T Consensus       201 ~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~-~~~~~~~g~~~~~~~g~  248 (249)
T PRK12827        201 AAPTEHLLNPVPVQRLGEPDEVAALVAFLVS-DAASYVTGQVIPVDGGF  248 (249)
T ss_pred             cchHHHHHhhCCCcCCcCHHHHHHHHHHHcC-cccCCccCcEEEeCCCC
Confidence            21            1 389999999999886 45678899999988764

>PRK07069 short chain dehydrogenase; Validated

Probab=99.98  E-value=2.8e-30  Score=230.20  Aligned_cols=220  Identities=25%  Similarity=0.263  Sum_probs=187.8

Q ss_pred             EEEeCCCchHHHHHHHHHHHcCCEEEEEecC-hhhHHHHHHHHhhCC--CceeEEEeeCCCHHHHHHHHHHHHhhCCCcc
Q 022103           33 AIVTGANKGIGFALVKRLAELGLTVILTARD-VERGQRAVESLSEKG--LPVNFFQLDVSDPSSIEAFVSWFKSNFAALD  109 (302)
Q Consensus        33 vlItGas~gIG~ala~~l~~~G~~V~l~~r~-~~~~~~~~~~l~~~~--~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id  109 (302)
                      ++||||++|||+++++.|+++|++|++++|+ .++++...+++....  ..+..+.+|++|.++++++++++.+.++++|
T Consensus         2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   81 (251)
T PRK07069          2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGLS   81 (251)
T ss_pred             EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCcc
Confidence            8999999999999999999999999999998 666777766665432  2345688999999999999999999999999


Q ss_pred             EEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhh
Q 022103          110 ILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEEL  188 (302)
Q Consensus       110 ~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  188 (302)
                      ++|||||.... .+.+.+.+++++++++|+.+++.+++.+++.|.+. ..++||++||..+..+.+              
T Consensus        82 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~ii~~ss~~~~~~~~--------------  146 (251)
T PRK07069         82 VLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRAS-QPASIVNISSVAAFKAEP--------------  146 (251)
T ss_pred             EEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhc-CCcEEEEecChhhccCCC--------------
Confidence            99999997654 56778999999999999999999999999999876 568999999988765432              


Q ss_pred             cHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCC--cEEEEeecCcccCCCCCCC----
Q 022103          189 SEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEG--ISVNSYCPGFTQTSMTQGQ----  262 (302)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~g--I~V~~v~PG~v~T~~~~~~----  262 (302)
                                                  .+..|+++|++++.++++++.|+.+++  |+|+.|+||+++|++....    
T Consensus       147 ----------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~  198 (251)
T PRK07069        147 ----------------------------DYTAYNASKAAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQRL  198 (251)
T ss_pred             ----------------------------CCchhHHHHHHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhhhc
Confidence                                        236799999999999999999987654  9999999999999986421    


Q ss_pred             ----------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCc
Q 022103          263 ----------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDP  296 (302)
Q Consensus       263 ----------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  296 (302)
                                      ...+|++++..+++++. ++...++|..+..++.
T Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~-~~~~~~~g~~i~~~~g  247 (251)
T PRK07069        199 GEEEATRKLARGVPLGRLGEPDDVAHAVLYLAS-DESRFVTGAELVIDGG  247 (251)
T ss_pred             cchhHHHHHhccCCCCCCcCHHHHHHHHHHHcC-ccccCccCCEEEECCC
Confidence                            12479999999999876 5667799999888776

>PRK09134 short chain dehydrogenase; Provisional

Probab=99.98  E-value=4.5e-30  Score=230.75  Aligned_cols=223  Identities=22%  Similarity=0.210  Sum_probs=186.4

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecC-hhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARD-VERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~-~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      ..+|+++||||++|||++++++|+++|++|+++.+. .+.++...+++...+.++.++.+|++|.+++.++++++.+.++
T Consensus         7 ~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~   86 (258)
T PRK09134          7 AAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALG   86 (258)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            357899999999999999999999999999887664 5566677777766667788999999999999999999999899


Q ss_pred             CccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccch
Q 022103          107 ALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILED  185 (302)
Q Consensus       107 ~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~  185 (302)
                      ++|+||||||.... ++.+.+.++++.++++|+.+++++++++.+.+.+. ..++||+++|..+..+.            
T Consensus        87 ~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~~~s~~~~~~~------------  153 (258)
T PRK09134         87 PITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPAD-ARGLVVNMIDQRVWNLN------------  153 (258)
T ss_pred             CCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCceEEEECchhhcCCC------------
Confidence            99999999997654 56778999999999999999999999999998875 56899999886543221            


Q ss_pred             hhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC---
Q 022103          186 EELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ---  262 (302)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~---  262 (302)
                                                    +.+..|++||++++.++++++.++.+. |+|++|+||++.|......   
T Consensus       154 ------------------------------p~~~~Y~~sK~a~~~~~~~la~~~~~~-i~v~~i~PG~v~t~~~~~~~~~  202 (258)
T PRK09134        154 ------------------------------PDFLSYTLSKAALWTATRTLAQALAPR-IRVNAIGPGPTLPSGRQSPEDF  202 (258)
T ss_pred             ------------------------------CCchHHHHHHHHHHHHHHHHHHHhcCC-cEEEEeecccccCCcccChHHH
Confidence                                          123679999999999999999998765 9999999999988653211   


Q ss_pred             ----------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          263 ----------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       263 ----------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                                ...+++++|..+.+++..   ..++|+++..++..
T Consensus       203 ~~~~~~~~~~~~~~~~d~a~~~~~~~~~---~~~~g~~~~i~gg~  244 (258)
T PRK09134        203 ARQHAATPLGRGSTPEEIAAAVRYLLDA---PSVTGQMIAVDGGQ  244 (258)
T ss_pred             HHHHhcCCCCCCcCHHHHHHHHHHHhcC---CCcCCCEEEECCCe
Confidence                      125789999999999862   34789998888764

>PRK08251 short chain dehydrogenase; Provisional

Probab=99.98  E-value=4.3e-30  Score=229.05  Aligned_cols=208  Identities=21%  Similarity=0.303  Sum_probs=182.6

Q ss_pred             CcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhC--CCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           30 ETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEK--GLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        30 ~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      +|+++||||++|||++++++|+++|++|++++|+.+++++..+.+.+.  +.++.++.+|+++.+++.++++++.+.+++
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG   81 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            689999999999999999999999999999999998888877776543  457889999999999999999999999999


Q ss_pred             ccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchh
Q 022103          108 LDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDE  186 (302)
Q Consensus       108 id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~  186 (302)
                      +|++|||||+... .+...+.+.+++.+++|+.+++.+++.+++.|++. +.++||++||..+..+.+            
T Consensus        82 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~~sS~~~~~~~~------------  148 (248)
T PRK08251         82 LDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQ-GSGHLVLISSVSAVRGLP------------  148 (248)
T ss_pred             CCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCeEEEEeccccccCCC------------
Confidence            9999999998654 45667889999999999999999999999999876 568999999988765432            


Q ss_pred             hhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCCC---
Q 022103          187 ELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQG---  263 (302)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~~---  263 (302)
                                                   ..+.+|+.||++++.+++.++.++...||+|+.|+||+++|++.+..+   
T Consensus       149 -----------------------------~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~  199 (248)
T PRK08251        149 -----------------------------GVKAAYAASKAGVASLGEGLRAELAKTPIKVSTIEPGYIRSEMNAKAKSTP  199 (248)
T ss_pred             -----------------------------CCcccHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcCcchhhhccccCC
Confidence                                         123679999999999999999999888999999999999999876543   


Q ss_pred             -CCCHHHHHHHHHHHhh
Q 022103          264 -SHTADEAADVGARLLL  279 (302)
Q Consensus       264 -~~~~~~~a~~~~~l~~  279 (302)
                       ..++++.+..++..+.
T Consensus       200 ~~~~~~~~a~~i~~~~~  216 (248)
T PRK08251        200 FMVDTETGVKALVKAIE  216 (248)
T ss_pred             ccCCHHHHHHHHHHHHh
Confidence             2678999999988876

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.97  E-value=1.5e-30  Score=230.19  Aligned_cols=212  Identities=25%  Similarity=0.278  Sum_probs=178.4

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      .+++|+++|||+++|||++++++|+++|++|++++|+....         ...++.++.+|++++      ++++.+.++
T Consensus         2 ~l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~---------~~~~~~~~~~D~~~~------~~~~~~~~~   66 (235)
T PRK06550          2 EFMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD---------LSGNFHFLQLDLSDD------LEPLFDWVP   66 (235)
T ss_pred             CCCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc---------cCCcEEEEECChHHH------HHHHHHhhC
Confidence            46789999999999999999999999999999999985431         123678899999988      344444558


Q ss_pred             CccEEEEcCCCCC--CCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccc
Q 022103          107 ALDILVNNAGVSF--NDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILE  184 (302)
Q Consensus       107 ~id~lv~~aG~~~--~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~  184 (302)
                      ++|++|||||...  .++.+.+.+++++++++|+.+++++++++++.|.++ +.++||++||..+..+.+          
T Consensus        67 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~~sS~~~~~~~~----------  135 (235)
T PRK06550         67 SVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLER-KSGIIINMCSIASFVAGG----------  135 (235)
T ss_pred             CCCEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEEcChhhccCCC----------
Confidence            9999999999753  356778999999999999999999999999999876 468999999988765432          


Q ss_pred             hhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC--
Q 022103          185 DEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ--  262 (302)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~--  262 (302)
                                                      ++..|+++|++++.++++++.++.++||+|++|+||+++|++....  
T Consensus       136 --------------------------------~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~~~~  183 (235)
T PRK06550        136 --------------------------------GGAAYTASKHALAGFTKQLALDYAKDGIQVFGIAPGAVKTPMTAADFE  183 (235)
T ss_pred             --------------------------------CCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCccCcccccccC
Confidence                                            2367999999999999999999998999999999999999986421  


Q ss_pred             ---------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          263 ---------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       263 ---------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                                     ...+|+++|+.+++++. +....++|.++..++..
T Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s-~~~~~~~g~~~~~~gg~  232 (235)
T PRK06550        184 PGGLADWVARETPIKRWAEPEEVAELTLFLAS-GKADYMQGTIVPIDGGW  232 (235)
T ss_pred             chHHHHHHhccCCcCCCCCHHHHHHHHHHHcC-hhhccCCCcEEEECCce
Confidence                           12579999999999986 55678999999998874

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=99.97  E-value=3.5e-30  Score=221.43  Aligned_cols=230  Identities=31%  Similarity=0.425  Sum_probs=192.3

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHc-CCEEEE-EecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhh--
Q 022103           29 KETIAIVTGANKGIGFALVKRLAEL-GLTVIL-TARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSN--  104 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~-G~~V~l-~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~--  104 (302)
                      +.|.++||||.+|||+.++++|.+. |.++++ ..|++++..+..+.......++.+++.|+++.+++..+++++.+-  
T Consensus         2 spksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iVg   81 (249)
T KOG1611|consen    2 SPKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIVG   81 (249)
T ss_pred             CCccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhcc
Confidence            4466999999999999999999986 676554 455577653333322233568999999999999999999999987  


Q ss_pred             CCCccEEEEcCCCCCC--CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCC----------CCcEEEecCCCcccc
Q 022103          105 FAALDILVNNAGVSFN--DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPS----------KSRILNISSRLGTLS  172 (302)
Q Consensus       105 ~g~id~lv~~aG~~~~--~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~----------~~~iv~vsS~~~~~~  172 (302)
                      ...+++|++|||+...  ...+.+.+.|.+.+++|..|+.++.|+++|++++...          +..||++||..+..+
T Consensus        82 ~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s~~  161 (249)
T KOG1611|consen   82 SDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGSIG  161 (249)
T ss_pred             cCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccccccC
Confidence            4579999999998754  4677888999999999999999999999999998732          237999999887633


Q ss_pred             cccCcccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecC
Q 022103          173 KVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPG  252 (302)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG  252 (302)
                                                             ...+..+.+|..||+|++.|+|+++.++.+.+|-|..+|||
T Consensus       162 ---------------------------------------~~~~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPG  202 (249)
T KOG1611|consen  162 ---------------------------------------GFRPGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPG  202 (249)
T ss_pred             ---------------------------------------CCCCcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCC
Confidence                                                   23355679999999999999999999999999999999999


Q ss_pred             cccCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          253 FTQTSMTQGQGSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       253 ~v~T~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                      +|.|+|.......++||-+..++..+. .-...-+|.||..++..+
T Consensus       203 wV~TDMgg~~a~ltveeSts~l~~~i~-kL~~~hnG~ffn~dlt~i  247 (249)
T KOG1611|consen  203 WVQTDMGGKKAALTVEESTSKLLASIN-KLKNEHNGGFFNRDGTPI  247 (249)
T ss_pred             eEEcCCCCCCcccchhhhHHHHHHHHH-hcCcccCcceEccCCCcC
Confidence            999999999989999999999988876 455557999999988754

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=99.97  E-value=6.3e-30  Score=227.22  Aligned_cols=224  Identities=29%  Similarity=0.344  Sum_probs=190.3

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHcCCEEEE-EecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCcc
Q 022103           31 TIAIVTGANKGIGFALVKRLAELGLTVIL-TARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALD  109 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~G~~V~l-~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id  109 (302)
                      ++++||||+|+||++++++|+++|++|++ ..|+.++.++..+++...+.++.++.+|++|+++++++++++.+.++.+|
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~id   81 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPLA   81 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCCC
Confidence            58999999999999999999999999876 46777777777777776666788999999999999999999999999999


Q ss_pred             EEEEcCCCCCC--CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCC--CCCcEEEecCCCcccccccCcccccccch
Q 022103          110 ILVNNAGVSFN--DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSP--SKSRILNISSRLGTLSKVRNPNIKSILED  185 (302)
Q Consensus       110 ~lv~~aG~~~~--~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~--~~~~iv~vsS~~~~~~~~~~~~~~~~~~~  185 (302)
                      ++|||+|....  .+.+.+.++++..+++|+.+++.+++.+++.+.++.  ..++||++||..+..+.+           
T Consensus        82 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~~-----------  150 (247)
T PRK09730         82 ALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAP-----------  150 (247)
T ss_pred             EEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCCC-----------
Confidence            99999997532  467789999999999999999999999999987652  357899999987765432           


Q ss_pred             hhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC---
Q 022103          186 EELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ---  262 (302)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~---  262 (302)
                                                    ..+..|+++|++++.++++++.++.+.||+|++|+||.++|++....   
T Consensus       151 ------------------------------~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~~~~  200 (247)
T PRK09730        151 ------------------------------GEYVDYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGGEP  200 (247)
T ss_pred             ------------------------------CcccchHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccCCCH
Confidence                                          12356999999999999999999988899999999999999975421   


Q ss_pred             -------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCc
Q 022103          263 -------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDP  296 (302)
Q Consensus       263 -------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  296 (302)
                                   ...+++++|..+.+++. +...+++|.++..++.
T Consensus       201 ~~~~~~~~~~~~~~~~~~~dva~~~~~~~~-~~~~~~~g~~~~~~g~  246 (247)
T PRK09730        201 GRVDRVKSNIPMQRGGQPEEVAQAIVWLLS-DKASYVTGSFIDLAGG  246 (247)
T ss_pred             HHHHHHHhcCCCCCCcCHHHHHHHHHhhcC-hhhcCccCcEEecCCC
Confidence                         11378999999999886 4566799999988763

>PRK07775 short chain dehydrogenase; Provisional

Probab=99.97  E-value=9.9e-30  Score=231.00  Aligned_cols=215  Identities=26%  Similarity=0.346  Sum_probs=184.9

Q ss_pred             ccccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHh
Q 022103           24 TKWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKS  103 (302)
Q Consensus        24 ~~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~  103 (302)
                      +.+++++|+++||||+|+||+++++.|+++|++|++++|+.+++++...++...+.++.++.+|+++++++.++++++.+
T Consensus         4 ~~~~~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   83 (274)
T PRK07775          4 FEPHPDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEE   83 (274)
T ss_pred             CCCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            34567789999999999999999999999999999999998888777777766666788899999999999999999999


Q ss_pred             hCCCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccc
Q 022103          104 NFAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSI  182 (302)
Q Consensus       104 ~~g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~  182 (302)
                      .++.+|++|||||.... ...+.+.+.++..+++|+.+++++++++++.|.++ ..++||++||..+..+.+        
T Consensus        84 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~-~~g~iv~isS~~~~~~~~--------  154 (274)
T PRK07775         84 ALGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIER-RRGDLIFVGSDVALRQRP--------  154 (274)
T ss_pred             hcCCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCceEEEECChHhcCCCC--------
Confidence            88999999999997643 45677889999999999999999999999998766 568999999987654322        


Q ss_pred             cchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCC-
Q 022103          183 LEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG-  261 (302)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~-  261 (302)
                                                        ....|+++|++++.+++.++.++.+.||+|++|+||+++|++... 
T Consensus       155 ----------------------------------~~~~Y~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~  200 (274)
T PRK07775        155 ----------------------------------HMGAYGAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSL  200 (274)
T ss_pred             ----------------------------------CcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCcccccC
Confidence                                              236799999999999999999998889999999999999886321 


Q ss_pred             --------------------CCCCCHHHHHHHHHHHhhcC
Q 022103          262 --------------------QGSHTADEAADVGARLLLLH  281 (302)
Q Consensus       262 --------------------~~~~~~~~~a~~~~~l~~~~  281 (302)
                                          .....++++|..+++++..+
T Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~~~~~~  240 (274)
T PRK07775        201 PAEVIGPMLEDWAKWGQARHDYFLRASDLARAITFVAETP  240 (274)
T ss_pred             ChhhhhHHHHHHHHhcccccccccCHHHHHHHHHHHhcCC
Confidence                                12368999999999998743

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=99.97  E-value=6.8e-30  Score=227.34  Aligned_cols=228  Identities=30%  Similarity=0.290  Sum_probs=197.5

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      +.+|+++||||+|+||+++++.|+++|++|++++|+.++.....+++...+.++.++.+|++|.+++.++++++...++.
T Consensus         4 ~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   83 (251)
T PRK12826          4 LEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGR   83 (251)
T ss_pred             CCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            56789999999999999999999999999999999988888888888776667899999999999999999999999999


Q ss_pred             ccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcc-cccccCcccccccch
Q 022103          108 LDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGT-LSKVRNPNIKSILED  185 (302)
Q Consensus       108 id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~-~~~~~~~~~~~~~~~  185 (302)
                      +|++||++|.... ++.+.+.++++..+++|+.+++.+++.+++.|.++ ..++||++||..+. .+.            
T Consensus        84 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~ii~~ss~~~~~~~~------------  150 (251)
T PRK12826         84 LDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRA-GGGRIVLTSSVAGPRVGY------------  150 (251)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCcEEEEEechHhhccCC------------
Confidence            9999999997654 45678899999999999999999999999999876 46899999998765 221            


Q ss_pred             hhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC---
Q 022103          186 EELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ---  262 (302)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~---  262 (302)
                                                    +.+..|+.+|++++.+++.++.++.+.|++++.|+||.++|++.+..   
T Consensus       151 ------------------------------~~~~~y~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~  200 (251)
T PRK12826        151 ------------------------------PGLAHYAASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNLGDA  200 (251)
T ss_pred             ------------------------------CCccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCch
Confidence                                          12367999999999999999999988899999999999999875432   


Q ss_pred             -------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcccC
Q 022103          263 -------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVK  299 (302)
Q Consensus       263 -------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  299 (302)
                                   ....++++|..+..++. +....++|++|..++.+..
T Consensus       201 ~~~~~~~~~~~~~~~~~~~dva~~~~~l~~-~~~~~~~g~~~~~~~g~~~  249 (251)
T PRK12826        201 QWAEAIAAAIPLGRLGEPEDIAAAVLFLAS-DEARYITGQTLPVDGGATL  249 (251)
T ss_pred             HHHHHHHhcCCCCCCcCHHHHHHHHHHHhC-ccccCcCCcEEEECCCccC
Confidence                         12578999999999875 5566689999999987654

>PRK06180 short chain dehydrogenase; Provisional

Probab=99.97  E-value=5.2e-30  Score=233.05  Aligned_cols=205  Identities=26%  Similarity=0.285  Sum_probs=176.9

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCc
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAAL  108 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~i  108 (302)
                      .+++++||||+||||++++++|+++|++|++++|+.++++...+.   .+.++.++.+|++|.+++.++++++.+.++.+
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~---~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~   79 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEAL---HPDRALARLLDVTDFDAIDAVVADAEATFGPI   79 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhh---cCCCeeEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            468999999999999999999999999999999998776554332   23468889999999999999999999999999


Q ss_pred             cEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhh
Q 022103          109 DILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEE  187 (302)
Q Consensus       109 d~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~  187 (302)
                      |+||||||.... ++.+.+.+++++++++|+.++++++++++|.|+++ ..++||++||..+..+.+             
T Consensus        80 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-~~~~iv~iSS~~~~~~~~-------------  145 (277)
T PRK06180         80 DVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRAR-RRGHIVNITSMGGLITMP-------------  145 (277)
T ss_pred             CEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcc-CCCEEEEEecccccCCCC-------------
Confidence            999999998644 56778999999999999999999999999999876 468999999988765432             


Q ss_pred             hcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC-----
Q 022103          188 LSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ-----  262 (302)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~-----  262 (302)
                                                   ++..|+++|++++.++++++.++.++||+|++|+||.++|++....     
T Consensus       146 -----------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~  196 (277)
T PRK06180        146 -----------------------------GIGYYCGSKFALEGISESLAKEVAPFGIHVTAVEPGSFRTDWAGRSMVRTP  196 (277)
T ss_pred             -----------------------------CcchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCcccCccccccccCC
Confidence                                         2478999999999999999999988999999999999999863211     


Q ss_pred             -----------------------CCCCHHHHHHHHHHHhh
Q 022103          263 -----------------------GSHTADEAADVGARLLL  279 (302)
Q Consensus       263 -----------------------~~~~~~~~a~~~~~l~~  279 (302)
                                             ...+|+++|..++.++.
T Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~l~  236 (277)
T PRK06180        197 RSIADYDALFGPIRQAREAKSGKQPGDPAKAAQAILAAVE  236 (277)
T ss_pred             CCcHhHHHHHHHHHHHHHhhccCCCCCHHHHHHHHHHHHc
Confidence                                   12478899999988876

>PRK08267 short chain dehydrogenase; Provisional

Probab=99.97  E-value=6.8e-30  Score=229.67  Aligned_cols=204  Identities=25%  Similarity=0.259  Sum_probs=179.7

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhh-CCCcc
Q 022103           31 TIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSN-FAALD  109 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~-~g~id  109 (302)
                      |+++||||+||||+++++.|+++|++|++++|+.+++++..+.+.  +.++.++.+|+++.+++.++++.+.++ ++++|
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id   79 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELG--AGNAWTGALDVTDRAAWDAALADFAAATGGRLD   79 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCC
Confidence            789999999999999999999999999999999988887777654  457899999999999999999998876 78999


Q ss_pred             EEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhh
Q 022103          110 ILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEEL  188 (302)
Q Consensus       110 ~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  188 (302)
                      +||||||.... .+.+.+.++++.++++|+.+++.+++++.+.|+++ ..++||++||..+..+...             
T Consensus        80 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~isS~~~~~~~~~-------------  145 (260)
T PRK08267         80 VLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKAT-PGARVINTSSASAIYGQPG-------------  145 (260)
T ss_pred             EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCCEEEEeCchhhCcCCCC-------------
Confidence            99999998654 46778899999999999999999999999999876 5689999999887655322             


Q ss_pred             cHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCC-------
Q 022103          189 SEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG-------  261 (302)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~-------  261 (302)
                                                   +..|+.||++++.++++++.++.+.||+|++|+||+++|++...       
T Consensus       146 -----------------------------~~~Y~~sKaa~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~  196 (260)
T PRK08267        146 -----------------------------LAVYSATKFAVRGLTEALDLEWRRHGIRVADVMPLFVDTAMLDGTSNEVDA  196 (260)
T ss_pred             -----------------------------chhhHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCcCCcccccccchhhh
Confidence                                         36799999999999999999999899999999999999998663       


Q ss_pred             ------CCCCCHHHHHHHHHHHhh
Q 022103          262 ------QGSHTADEAADVGARLLL  279 (302)
Q Consensus       262 ------~~~~~~~~~a~~~~~l~~  279 (302)
                            ....++++++..+..++.
T Consensus       197 ~~~~~~~~~~~~~~va~~~~~~~~  220 (260)
T PRK08267        197 GSTKRLGVRLTPEDVAEAVWAAVQ  220 (260)
T ss_pred             hhHhhccCCCCHHHHHHHHHHHHh
Confidence                  113678999999999985

>PRK07074 short chain dehydrogenase; Provisional

Probab=99.97  E-value=9.7e-30  Score=228.11  Aligned_cols=223  Identities=25%  Similarity=0.244  Sum_probs=192.6

Q ss_pred             CcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCcc
Q 022103           30 ETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALD  109 (302)
Q Consensus        30 ~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id  109 (302)
                      +|+++||||+++||++++++|+++|++|++++|+.++.+...+.+.  +.++.++.+|++|.+++.+.++++...++++|
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   79 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALG--DARFVPVACDLTDAASLAAALANAAAERGPVD   79 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            5799999999999999999999999999999999988877777663  34688999999999999999999999999999


Q ss_pred             EEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhh
Q 022103          110 ILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEEL  188 (302)
Q Consensus       110 ~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  188 (302)
                      ++||++|.... ++.+.+.++++..+.+|+.+++.+++++++.+.++ ..++||++||..+...                
T Consensus        80 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~~sS~~~~~~----------------  142 (257)
T PRK07074         80 VLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKR-SRGAVVNIGSVNGMAA----------------  142 (257)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCeEEEEEcchhhcCC----------------
Confidence            99999998644 56678899999999999999999999999999876 5689999999665321                


Q ss_pred             cHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCC-------
Q 022103          189 SEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG-------  261 (302)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~-------  261 (302)
                                                 .++..|+.+|++++.++++++.++.++||+|+.++||+++|++...       
T Consensus       143 ---------------------------~~~~~y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~  195 (257)
T PRK07074        143 ---------------------------LGHPAYSAAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWEARVAANPQ  195 (257)
T ss_pred             ---------------------------CCCcccHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcchhhcccccChH
Confidence                                       1125699999999999999999999999999999999999997542       


Q ss_pred             -----------CCCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcccC
Q 022103          262 -----------QGSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVK  299 (302)
Q Consensus       262 -----------~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  299 (302)
                                 .....+++++..+.+++. +....++|.++..++.+..
T Consensus       196 ~~~~~~~~~~~~~~~~~~d~a~~~~~l~~-~~~~~~~g~~~~~~~g~~~  243 (257)
T PRK07074        196 VFEELKKWYPLQDFATPDDVANAVLFLAS-PAARAITGVCLPVDGGLTA  243 (257)
T ss_pred             HHHHHHhcCCCCCCCCHHHHHHHHHHHcC-chhcCcCCcEEEeCCCcCc
Confidence                       123778999999999986 5566789999998887654

>PRK06914 short chain dehydrogenase; Provisional

Probab=99.97  E-value=6.4e-30  Score=232.21  Aligned_cols=209  Identities=29%  Similarity=0.361  Sum_probs=181.7

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCC--CceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKG--LPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      +++|+++||||+|+||+++++.|+++|++|++++|+.++++...+++...+  .++.++.+|++|.+++++ ++++.+.+
T Consensus         1 ~~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~   79 (280)
T PRK06914          1 MNKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEI   79 (280)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhc
Confidence            467899999999999999999999999999999999988887777665543  468899999999999999 99998888


Q ss_pred             CCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccc
Q 022103          106 AALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILE  184 (302)
Q Consensus       106 g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~  184 (302)
                      +++|++|||||.... .+.+.+.+++++.+++|+.+++.+++.+++.|++. ..++||++||..+..+.+          
T Consensus        80 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~vsS~~~~~~~~----------  148 (280)
T PRK06914         80 GRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQ-KSGKIINISSISGRVGFP----------  148 (280)
T ss_pred             CCeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCEEEEECcccccCCCC----------
Confidence            999999999998654 45678899999999999999999999999999876 568999999987765432          


Q ss_pred             hhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC--
Q 022103          185 DEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ--  262 (302)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~--  262 (302)
                                                      ++..|+++|++++.++++++.++.++||+|+.|+||+++|+++...  
T Consensus       149 --------------------------------~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~  196 (280)
T PRK06914        149 --------------------------------GLSPYVSSKYALEGFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQ  196 (280)
T ss_pred             --------------------------------CCchhHHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccchhhcccc
Confidence                                            2467999999999999999999988999999999999999975421  


Q ss_pred             ----------------------------CCCCHHHHHHHHHHHhhc
Q 022103          263 ----------------------------GSHTADEAADVGARLLLL  280 (302)
Q Consensus       263 ----------------------------~~~~~~~~a~~~~~l~~~  280 (302)
                                                  ...+++++|..+.+++..
T Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~  242 (280)
T PRK06914        197 LAENQSETTSPYKEYMKKIQKHINSGSDTFGNPIDVANLIVEIAES  242 (280)
T ss_pred             ccccccccccchHHHHHHHHHHHhhhhhccCCHHHHHHHHHHHHcC
Confidence                                        125789999999999873

>PRK06179 short chain dehydrogenase; Provisional

Probab=99.97  E-value=4.1e-30  Score=232.32  Aligned_cols=201  Identities=32%  Similarity=0.450  Sum_probs=175.4

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCc
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAAL  108 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~i  108 (302)
                      ++++++||||+||||++++++|+++|++|++++|+.++.+.        ..++.++.+|++|+++++++++.+.++++.+
T Consensus         3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~--------~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~   74 (270)
T PRK06179          3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAP--------IPGVELLELDVTDDASVQAAVDEVIARAGRI   74 (270)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc--------cCCCeeEEeecCCHHHHHHHHHHHHHhCCCC
Confidence            46899999999999999999999999999999998755431        1357889999999999999999999999999


Q ss_pred             cEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhh
Q 022103          109 DILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEE  187 (302)
Q Consensus       109 d~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~  187 (302)
                      |+||||||.... .+.+.+.+++++++++|+.+++++++.++|.|+++ +.++||++||..+..+.+             
T Consensus        75 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-~~~~iv~isS~~~~~~~~-------------  140 (270)
T PRK06179         75 DVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQ-GSGRIINISSVLGFLPAP-------------  140 (270)
T ss_pred             CEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCceEEEECCccccCCCC-------------
Confidence            999999998654 56778999999999999999999999999999877 579999999988765432             


Q ss_pred             hcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCCC----
Q 022103          188 LSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQG----  263 (302)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~~----  263 (302)
                                                   ....|+++|++++.++++++.|+.++||+|++|+||+++|++..+..    
T Consensus       141 -----------------------------~~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~~~~~~~~~~  191 (270)
T PRK06179        141 -----------------------------YMALYAASKHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNFDANAPEPDS  191 (270)
T ss_pred             -----------------------------CccHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeCCCcccccccccCCCCC
Confidence                                         23679999999999999999999999999999999999999865421    


Q ss_pred             ----------------------CCCHHHHHHHHHHHhhc
Q 022103          264 ----------------------SHTADEAADVGARLLLL  280 (302)
Q Consensus       264 ----------------------~~~~~~~a~~~~~l~~~  280 (302)
                                            ...|+++|..++.++..
T Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~~~~  230 (270)
T PRK06179        192 PLAEYDRERAVVSKAVAKAVKKADAPEVVADTVVKAALG  230 (270)
T ss_pred             cchhhHHHHHHHHHHHHhccccCCCHHHHHHHHHHHHcC
Confidence                                  24689999999998763

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=99.97  E-value=1.1e-29  Score=226.99  Aligned_cols=217  Identities=26%  Similarity=0.369  Sum_probs=182.1

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCccEE
Q 022103           32 IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDIL  111 (302)
Q Consensus        32 ~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id~l  111 (302)
                      +++||||+||||.++++.|+++|++|++++|+.++++.....+   +.++.++.+|+++.++++++++++.+.++.+|++
T Consensus         2 ~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~v   78 (248)
T PRK10538          2 IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL---GDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVL   78 (248)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---ccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            6899999999999999999999999999999988877665554   3468899999999999999999999999999999


Q ss_pred             EEcCCCCC--CCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhhc
Q 022103          112 VNNAGVSF--NDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELS  189 (302)
Q Consensus       112 v~~aG~~~--~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~  189 (302)
                      |||||...  .+..+.+.+++++++++|+.+++.+++++++.|.++ +.++||++||..+..+..               
T Consensus        79 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~isS~~~~~~~~---------------  142 (248)
T PRK10538         79 VNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVER-NHGHIINIGSTAGSWPYA---------------  142 (248)
T ss_pred             EECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEECCcccCCCCC---------------
Confidence            99999753  246678999999999999999999999999999876 568999999987654321               


Q ss_pred             HHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCC--------
Q 022103          190 EEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG--------  261 (302)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~--------  261 (302)
                                                 ++..|+++|++++.+++.++.++.++||+|+.|+||.+.|++...        
T Consensus       143 ---------------------------~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~~~~~~~~~~~~~  195 (248)
T PRK10538        143 ---------------------------GGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDG  195 (248)
T ss_pred             ---------------------------CCchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCeecccccchhhccCcHH
Confidence                                       236799999999999999999999999999999999998443211        


Q ss_pred             --------CCCCCHHHHHHHHHHHhhcCCCCCCCcceeecCC
Q 022103          262 --------QGSHTADEAADVGARLLLLHPQQLPTAKFYIGLD  295 (302)
Q Consensus       262 --------~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~  295 (302)
                              ....+|+++|..+.+++. .+..+..+.+.....
T Consensus       196 ~~~~~~~~~~~~~~~dvA~~~~~l~~-~~~~~~~~~~~~~~~  236 (248)
T PRK10538        196 KAEKTYQNTVALTPEDVSEAVWWVAT-LPAHVNINTLEMMPV  236 (248)
T ss_pred             HHHhhccccCCCCHHHHHHHHHHHhc-CCCcccchhhccccc
Confidence                    123579999999999987 455555665554433

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.97  E-value=1.9e-29  Score=223.64  Aligned_cols=228  Identities=32%  Similarity=0.392  Sum_probs=194.1

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChh-hHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVE-RGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~-~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      .+++|+++|||++|+||+++++.|+++|++|+++.|+.. ..+...+++...+.++.++.+|+++.+++.++++++.+.+
T Consensus         2 ~~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   81 (248)
T PRK05557          2 SLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEF   81 (248)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            467899999999999999999999999999988888765 3555666666556688899999999999999999999988


Q ss_pred             CCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccc
Q 022103          106 AALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILE  184 (302)
Q Consensus       106 g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~  184 (302)
                      +++|++||++|.... ...+.+.+.++..+.+|+.+++.+.+++++.+.+. +.++||++||..+..+.+.         
T Consensus        82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~~v~iss~~~~~~~~~---------  151 (248)
T PRK05557         82 GGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQ-RSGRIINISSVVGLMGNPG---------  151 (248)
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCeEEEEEcccccCcCCCC---------
Confidence            999999999997654 45678889999999999999999999999998776 4679999999876644322         


Q ss_pred             hhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC--
Q 022103          185 DEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ--  262 (302)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~--  262 (302)
                                                       +..|+++|++++.+++.++.++...||++++|+||+++|++....  
T Consensus       152 ---------------------------------~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~~~~  198 (248)
T PRK05557        152 ---------------------------------QANYAASKAGVIGFTKSLARELASRGITVNAVAPGFIETDMTDALPE  198 (248)
T ss_pred             ---------------------------------CchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCccccccCh
Confidence                                             367999999999999999999988899999999999999886543  


Q ss_pred             -------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          263 -------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       263 -------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                                   ....+++++..+.+++. .....++|+++..++.+.
T Consensus       199 ~~~~~~~~~~~~~~~~~~~~va~~~~~l~~-~~~~~~~g~~~~i~~~~~  246 (248)
T PRK05557        199 DVKEAILAQIPLGRLGQPEEIASAVAFLAS-DEAAYITGQTLHVNGGMV  246 (248)
T ss_pred             HHHHHHHhcCCCCCCcCHHHHHHHHHHHcC-cccCCccccEEEecCCcc
Confidence                         12578999999998876 455668999999988754

>PRK07060 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.4e-29  Score=224.89  Aligned_cols=221  Identities=28%  Similarity=0.256  Sum_probs=186.5

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      +++++++++|||++++||+++++.|+++|++|++++|+.++.++..+..     ...++.+|+++.+++.++++.    .
T Consensus         5 ~~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~v~~~~~~----~   75 (245)
T PRK07060          5 FDFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGET-----GCEPLRLDVGDDAAIRAALAA----A   75 (245)
T ss_pred             cccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCeEEEecCCCHHHHHHHHHH----h
Confidence            4578899999999999999999999999999999999987766554433     356788999999998888775    3


Q ss_pred             CCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccc
Q 022103          106 AALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILE  184 (302)
Q Consensus       106 g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~  184 (302)
                      +++|++|||+|.... +..+.+.+++++.+.+|+.+++.+++++++.+.+....++||++||..+..+..          
T Consensus        76 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~----------  145 (245)
T PRK07060         76 GAFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGLP----------  145 (245)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCCC----------
Confidence            689999999997643 456688899999999999999999999999987653358999999987764422          


Q ss_pred             hhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCC---
Q 022103          185 DEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG---  261 (302)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~---  261 (302)
                                                      .+..|+.+|++++.++++++.++.++||++++|+||+++|++.+.   
T Consensus       146 --------------------------------~~~~y~~sK~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~  193 (245)
T PRK07060        146 --------------------------------DHLAYCASKAALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAEAWS  193 (245)
T ss_pred             --------------------------------CCcHhHHHHHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhhhcc
Confidence                                            236799999999999999999998889999999999999998531   


Q ss_pred             --------------CCCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          262 --------------QGSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       262 --------------~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                                    ....++++++..+.+++. ++...++|+++..++...
T Consensus       194 ~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~-~~~~~~~G~~~~~~~g~~  243 (245)
T PRK07060        194 DPQKSGPMLAAIPLGRFAEVDDVAAPILFLLS-DAASMVSGVSLPVDGGYT  243 (245)
T ss_pred             CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcC-cccCCccCcEEeECCCcc
Confidence                          123678999999999987 566779999999998754

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.7e-29  Score=223.01  Aligned_cols=227  Identities=23%  Similarity=0.217  Sum_probs=194.3

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      .+++|+++|||++|+||+++++.|+++|++|++++|+.++..+..+++...  .+..+.+|++|.+++.++++++.+.++
T Consensus         4 ~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (239)
T PRK12828          4 SLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPAD--ALRIGGIDLVDPQAARRAVDEVNRQFG   81 (239)
T ss_pred             CCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhc--CceEEEeecCCHHHHHHHHHHHHHHhC
Confidence            467899999999999999999999999999999999988777766666543  456788999999999999999999999


Q ss_pred             CccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccch
Q 022103          107 ALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILED  185 (302)
Q Consensus       107 ~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~  185 (302)
                      ++|++||++|.... .+.+.+.+.+++.+++|+.+++.+++++++.+.++ ..++||++||..+..+.            
T Consensus        82 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~~sS~~~~~~~------------  148 (239)
T PRK12828         82 RLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTAS-GGGRIVNIGAGAALKAG------------  148 (239)
T ss_pred             CcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhc-CCCEEEEECchHhccCC------------
Confidence            99999999997543 45677899999999999999999999999999876 57899999998775432            


Q ss_pred             hhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC---
Q 022103          186 EELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ---  262 (302)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~---  262 (302)
                                                    +.+..|+++|++++.+++.++.++.+.||+++.|.||.+.|++....   
T Consensus       149 ------------------------------~~~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~~~~~  198 (239)
T PRK12828        149 ------------------------------PGMGAYAAAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPPNRADMPD  198 (239)
T ss_pred             ------------------------------CCcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcchhhcCCc
Confidence                                          12367999999999999999999888899999999999999875432   


Q ss_pred             ----CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcccC
Q 022103          263 ----GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVK  299 (302)
Q Consensus       263 ----~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  299 (302)
                          ...++++++..+.+++. ....+.+|+.+..++++..
T Consensus       199 ~~~~~~~~~~dva~~~~~~l~-~~~~~~~g~~~~~~g~~~~  238 (239)
T PRK12828        199 ADFSRWVTPEQIAAVIAFLLS-DEAQAITGASIPVDGGVAL  238 (239)
T ss_pred             hhhhcCCCHHHHHHHHHHHhC-cccccccceEEEecCCEeC
Confidence                12568999999999986 4555689999999998754

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=99.97  E-value=5.3e-30  Score=230.49  Aligned_cols=189  Identities=30%  Similarity=0.433  Sum_probs=169.4

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      .+.++|.|+|||+.+|+|+.+|++|.++|++|++...+++..+....+..  .++...++.|+|++++++++.+.++++.
T Consensus        25 ~~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~--s~rl~t~~LDVT~~esi~~a~~~V~~~l  102 (322)
T KOG1610|consen   25 DSLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETK--SPRLRTLQLDVTKPESVKEAAQWVKKHL  102 (322)
T ss_pred             cccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhc--CCcceeEeeccCCHHHHHHHHHHHHHhc
Confidence            45778999999999999999999999999999999988777666666654  4688889999999999999999999866


Q ss_pred             --CCccEEEEcCCCCCC--CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCccccc
Q 022103          106 --AALDILVNNAGVSFN--DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKS  181 (302)
Q Consensus       106 --g~id~lv~~aG~~~~--~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~  181 (302)
                        ..+..||||||+...  +.+-.+.++++.+++||++|++.++++++|+++++  +||||++||..|..+.+.      
T Consensus       103 ~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~a--rGRvVnvsS~~GR~~~p~------  174 (322)
T KOG1610|consen  103 GEDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRA--RGRVVNVSSVLGRVALPA------  174 (322)
T ss_pred             ccccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhc--cCeEEEecccccCccCcc------
Confidence              359999999997643  56778999999999999999999999999999987  799999999999866543      


Q ss_pred             ccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCC
Q 022103          182 ILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ  260 (302)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~  260 (302)
                                                          ..+|++||+|+++|+.+|+.|+.++||+|..|.||+.+|++..
T Consensus       175 ------------------------------------~g~Y~~SK~aVeaf~D~lR~EL~~fGV~VsiiePG~f~T~l~~  217 (322)
T KOG1610|consen  175 ------------------------------------LGPYCVSKFAVEAFSDSLRRELRPFGVKVSIIEPGFFKTNLAN  217 (322)
T ss_pred             ------------------------------------cccchhhHHHHHHHHHHHHHHHHhcCcEEEEeccCccccccCC
Confidence                                                3789999999999999999999999999999999999999965

>PRK07577 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.3e-29  Score=223.90  Aligned_cols=213  Identities=29%  Similarity=0.315  Sum_probs=180.8

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      +.+|+++||||+++||+++++.|+++|++|++++|+.++.           ....++.+|+++.++++++++++.+.+ .
T Consensus         1 ~~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~-----------~~~~~~~~D~~~~~~~~~~~~~~~~~~-~   68 (234)
T PRK07577          1 MSSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD-----------FPGELFACDLADIEQTAATLAQINEIH-P   68 (234)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc-----------cCceEEEeeCCCHHHHHHHHHHHHHhC-C
Confidence            3578999999999999999999999999999999987540           012578899999999999999998876 5


Q ss_pred             ccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchh
Q 022103          108 LDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDE  186 (302)
Q Consensus       108 id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~  186 (302)
                      +|++|||+|.... ++.+.+.+++++.+++|+.+++.+.+++++.|+++ +.++||++||... .+.+            
T Consensus        69 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~~sS~~~-~~~~------------  134 (234)
T PRK07577         69 VDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLR-EQGRIVNICSRAI-FGAL------------  134 (234)
T ss_pred             CcEEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEEEEccccc-cCCC------------
Confidence            8999999998654 56677899999999999999999999999999876 5689999999753 2211            


Q ss_pred             hhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCCC---
Q 022103          187 ELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQG---  263 (302)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~~---  263 (302)
                                                    ...+|+++|++++.++++++.|+.+.||+|++|+||+++|++.....   
T Consensus       135 ------------------------------~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~  184 (234)
T PRK07577        135 ------------------------------DRTSYSAAKSALVGCTRTWALELAEYGITVNAVAPGPIETELFRQTRPVG  184 (234)
T ss_pred             ------------------------------CchHHHHHHHHHHHHHHHHHHHHHhhCcEEEEEecCcccCcccccccccc
Confidence                                          13679999999999999999999989999999999999999865321   


Q ss_pred             ---------------CCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          264 ---------------SHTADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       264 ---------------~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                                     ...|+++|..+++++. ++...++|.++..++..
T Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~-~~~~~~~g~~~~~~g~~  232 (234)
T PRK07577        185 SEEEKRVLASIPMRRLGTPEEVAAAIAFLLS-DDAGFITGQVLGVDGGG  232 (234)
T ss_pred             hhHHHHHhhcCCCCCCcCHHHHHHHHHHHhC-cccCCccceEEEecCCc
Confidence                           1378999999999986 45677999999988753

>PRK06924 short chain dehydrogenase; Provisional

Probab=99.97  E-value=7.4e-30  Score=227.89  Aligned_cols=218  Identities=24%  Similarity=0.307  Sum_probs=179.6

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHcCCEEEEEecCh-hhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCc-
Q 022103           31 TIAIVTGANKGIGFALVKRLAELGLTVILTARDV-ERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAAL-  108 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~-~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~i-  108 (302)
                      |+++||||+||||+++++.|+++|++|++++|+. +.++...+   ..+.++.++.+|+++.++++++++++...++.. 
T Consensus         2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~   78 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAE---QYNSNLTFHSLDLQDVHELETNFNEILSSIQEDN   78 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHh---ccCCceEEEEecCCCHHHHHHHHHHHHHhcCccc
Confidence            6899999999999999999999999999999986 33333222   234578899999999999999999998766532 


Q ss_pred             -c--EEEEcCCCCCC--CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCccccccc
Q 022103          109 -D--ILVNNAGVSFN--DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSIL  183 (302)
Q Consensus       109 -d--~lv~~aG~~~~--~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~  183 (302)
                       +  ++|+|+|...+  ++.+.+.+++.+.+++|+.+++.++++++++|.+....++||++||..+..+.          
T Consensus        79 ~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~----------  148 (251)
T PRK06924         79 VSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKNPY----------  148 (251)
T ss_pred             CCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcCCC----------
Confidence             2  79999997533  56788999999999999999999999999999875346799999997765332          


Q ss_pred             chhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHcc--CCCcEEEEeecCcccCCCCCC
Q 022103          184 EDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYE--GEGISVNSYCPGFTQTSMTQG  261 (302)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~--~~gI~V~~v~PG~v~T~~~~~  261 (302)
                                                      +++..|+++|+|++.+++.++.|++  +.||+|++|+||+++|++...
T Consensus       149 --------------------------------~~~~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~  196 (251)
T PRK06924        149 --------------------------------FGWSAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQ  196 (251)
T ss_pred             --------------------------------CCcHHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHH
Confidence                                            2247899999999999999999974  468999999999999987431


Q ss_pred             ---------------------CCCCCHHHHHHHHHHHhhcCCCCCCCcceeecCC
Q 022103          262 ---------------------QGSHTADEAADVGARLLLLHPQQLPTAKFYIGLD  295 (302)
Q Consensus       262 ---------------------~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~  295 (302)
                                           ....+|+++|..+++++..  ..+++|+++..++
T Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~--~~~~~G~~~~v~~  249 (251)
T PRK06924        197 IRSSSKEDFTNLDRFITLKEEGKLLSPEYVAKALRNLLET--EDFPNGEVIDIDE  249 (251)
T ss_pred             HHhcCcccchHHHHHHHHhhcCCcCCHHHHHHHHHHHHhc--ccCCCCCEeehhh
Confidence                                 1246899999999999873  3678999988765

>PRK05693 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.8e-29  Score=228.84  Aligned_cols=199  Identities=27%  Similarity=0.360  Sum_probs=172.4

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCccE
Q 022103           31 TIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDI  110 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id~  110 (302)
                      |+++||||+||||+++++.|+++|++|++++|+.++++...    ..  .+.++.+|+++.++++++++++.+.++++|+
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~----~~--~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   75 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALA----AA--GFTAVQLDVNDGAALARLAEELEAEHGGLDV   75 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----HC--CCeEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence            68999999999999999999999999999999987655432    22  3678899999999999999999999999999


Q ss_pred             EEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhhc
Q 022103          111 LVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELS  189 (302)
Q Consensus       111 lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~  189 (302)
                      +|||||.... ++.+.+.++++..+++|+.+++.++++++|.|.+.  .++||++||..+..+.+               
T Consensus        76 vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--~g~iv~isS~~~~~~~~---------------  138 (274)
T PRK05693         76 LINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRS--RGLVVNIGSVSGVLVTP---------------  138 (274)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc--CCEEEEECCccccCCCC---------------
Confidence            9999997643 56778999999999999999999999999999764  58999999988765432               


Q ss_pred             HHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCCC------
Q 022103          190 EEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQG------  263 (302)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~~------  263 (302)
                                                 +...|+++|++++.++++++.|+.++||+|++|+||+|+|++....+      
T Consensus       139 ---------------------------~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~  191 (274)
T PRK05693        139 ---------------------------FAGAYCASKAAVHALSDALRLELAPFGVQVMEVQPGAIASQFASNASREAEQL  191 (274)
T ss_pred             ---------------------------CccHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccccccccccccchhhc
Confidence                                       23679999999999999999999999999999999999999876421      


Q ss_pred             ------------------------CCCHHHHHHHHHHHhh
Q 022103          264 ------------------------SHTADEAADVGARLLL  279 (302)
Q Consensus       264 ------------------------~~~~~~~a~~~~~l~~  279 (302)
                                              ..+++++|..++..+.
T Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~~  231 (274)
T PRK05693        192 LAEQSPWWPLREHIQARARASQDNPTPAAEFARQLLAAVQ  231 (274)
T ss_pred             CCCCCccHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHh
Confidence                                    1468999999988876

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.97  E-value=3.8e-29  Score=221.41  Aligned_cols=228  Identities=30%  Similarity=0.380  Sum_probs=197.8

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      ++++++++||||+|+||.++++.|+++|++|++++|+.++.+.....+.+.+.++.++.+|++|++++.++++++...++
T Consensus         2 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (246)
T PRK05653          2 SLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFG   81 (246)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            45678999999999999999999999999999999999888887887776677889999999999999999999988889


Q ss_pred             CccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccch
Q 022103          107 ALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILED  185 (302)
Q Consensus       107 ~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~  185 (302)
                      .+|.+||++|.... +..+.+.++++..+++|+.+.+++++.+.+.|.+. ..++||++||..+..+..           
T Consensus        82 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~~ii~~ss~~~~~~~~-----------  149 (246)
T PRK05653         82 ALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKA-RYGRIVNISSVSGVTGNP-----------  149 (246)
T ss_pred             CCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEECcHHhccCCC-----------
Confidence            99999999997644 45678899999999999999999999999999776 458999999987654321           


Q ss_pred             hhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC---
Q 022103          186 EELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ---  262 (302)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~---  262 (302)
                                                     .+..|+.+|++++.+++++++++.+.|+++++|+||.+.+++....   
T Consensus       150 -------------------------------~~~~y~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~  198 (246)
T PRK05653        150 -------------------------------GQTNYSAAKAGVIGFTKALALELASRGITVNAVAPGFIDTDMTEGLPEE  198 (246)
T ss_pred             -------------------------------CCcHhHhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhhhhHH
Confidence                                           2367999999999999999999988899999999999999887531   


Q ss_pred             ------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          263 ------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       263 ------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                                  ...+++++++.+.+++. +.....+|.++..++++.
T Consensus       199 ~~~~~~~~~~~~~~~~~~dva~~~~~~~~-~~~~~~~g~~~~~~gg~~  245 (246)
T PRK05653        199 VKAEILKEIPLGRLGQPEEVANAVAFLAS-DAASYITGQVIPVNGGMY  245 (246)
T ss_pred             HHHHHHhcCCCCCCcCHHHHHHHHHHHcC-chhcCccCCEEEeCCCee
Confidence                        12567999999999986 555678999999998764

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.97  E-value=1.5e-29  Score=245.45  Aligned_cols=224  Identities=25%  Similarity=0.274  Sum_probs=190.0

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecCh--hhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhh
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDV--ERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSN  104 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~--~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~  104 (302)
                      .+++++++||||++|||+++|+.|+++|++|++++|..  +++++..+++     ...++.+|+++.++++++++.+.+.
T Consensus       207 ~~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~-----~~~~~~~Dv~~~~~~~~~~~~~~~~  281 (450)
T PRK08261        207 PLAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRV-----GGTALALDITAPDAPARIAEHLAER  281 (450)
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHc-----CCeEEEEeCCCHHHHHHHHHHHHHh
Confidence            36799999999999999999999999999999998853  3333333332     2357889999999999999999999


Q ss_pred             CCCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCccccccc
Q 022103          105 FAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSIL  183 (302)
Q Consensus       105 ~g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~  183 (302)
                      ++++|+||||||.... .+.+.+.+.|+.++++|+.+++++++.+.+.+..+ ..++||++||..+..+.+.        
T Consensus       282 ~g~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-~~g~iv~~SS~~~~~g~~~--------  352 (450)
T PRK08261        282 HGGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALG-DGGRIVGVSSISGIAGNRG--------  352 (450)
T ss_pred             CCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhc-CCCEEEEECChhhcCCCCC--------
Confidence            9999999999998654 56778999999999999999999999999965544 4689999999888755432        


Q ss_pred             chhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCCC
Q 022103          184 EDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQG  263 (302)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~~  263 (302)
                                                        +..|+++|+++++|+++++.++.++||+|+.|+||+++|+|.....
T Consensus       353 ----------------------------------~~~Y~asKaal~~~~~~la~el~~~gi~v~~v~PG~i~t~~~~~~~  398 (450)
T PRK08261        353 ----------------------------------QTNYAASKAGVIGLVQALAPLLAERGITINAVAPGFIETQMTAAIP  398 (450)
T ss_pred             ----------------------------------ChHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeCcCcchhhhccc
Confidence                                              3679999999999999999999999999999999999999865421


Q ss_pred             ---------------CCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcccC
Q 022103          264 ---------------SHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVK  299 (302)
Q Consensus       264 ---------------~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  299 (302)
                                     ...|++++..+.+|+. +...+++|+++..+|..+.
T Consensus       399 ~~~~~~~~~~~~l~~~~~p~dva~~~~~l~s-~~~~~itG~~i~v~g~~~~  448 (450)
T PRK08261        399 FATREAGRRMNSLQQGGLPVDVAETIAWLAS-PASGGVTGNVVRVCGQSLL  448 (450)
T ss_pred             hhHHHHHhhcCCcCCCCCHHHHHHHHHHHhC-hhhcCCCCCEEEECCCccc
Confidence                           1478999999999986 6777899999999887553

>PRK07102 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2.4e-29  Score=223.87  Aligned_cols=206  Identities=29%  Similarity=0.332  Sum_probs=178.2

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhC-CCceeEEEeeCCCHHHHHHHHHHHHhhCCCcc
Q 022103           31 TIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEK-GLPVNFFQLDVSDPSSIEAFVSWFKSNFAALD  109 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id  109 (302)
                      |+++||||++|||++++++|+++|++|++++|+.++.+...+.+... +.++.++++|++++++++++++++.+   .+|
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~---~~d   78 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPA---LPD   78 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhh---cCC
Confidence            68999999999999999999999999999999998887777766543 35788999999999999999998865   469


Q ss_pred             EEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhh
Q 022103          110 ILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEEL  188 (302)
Q Consensus       110 ~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  188 (302)
                      ++|||+|.... .+.+.+.+++++.+++|+.+++++++++.|.|.++ +.++||++||..+..+.+              
T Consensus        79 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~~sS~~~~~~~~--------------  143 (243)
T PRK07102         79 IVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEAR-GSGTIVGISSVAGDRGRA--------------  143 (243)
T ss_pred             EEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC-CCCEEEEEecccccCCCC--------------
Confidence            99999997543 56778899999999999999999999999999876 568999999987654422              


Q ss_pred             cHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCCC-----
Q 022103          189 SEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQG-----  263 (302)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~~-----  263 (302)
                                                  ....|+++|+++++++++++.|+.+.||+|++|+||+++|++.....     
T Consensus       144 ----------------------------~~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~v~t~~~~~~~~~~~~  195 (243)
T PRK07102        144 ----------------------------SNYVYGSAKAALTAFLSGLRNRLFKSGVHVLTVKPGFVRTPMTAGLKLPGPL  195 (243)
T ss_pred             ----------------------------CCcccHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccChhhhccCCCccc
Confidence                                        23679999999999999999999999999999999999999866543     


Q ss_pred             CCCHHHHHHHHHHHhhcCC
Q 022103          264 SHTADEAADVGARLLLLHP  282 (302)
Q Consensus       264 ~~~~~~~a~~~~~l~~~~~  282 (302)
                      ..++++++..+.+.+....
T Consensus       196 ~~~~~~~a~~i~~~~~~~~  214 (243)
T PRK07102        196 TAQPEEVAKDIFRAIEKGK  214 (243)
T ss_pred             cCCHHHHHHHHHHHHhCCC
Confidence            3679999999999987433

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=99.97  E-value=1.5e-29  Score=224.03  Aligned_cols=214  Identities=24%  Similarity=0.314  Sum_probs=173.6

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHcC--CEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCc
Q 022103           31 TIAIVTGANKGIGFALVKRLAELG--LTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAAL  108 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~G--~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~i  108 (302)
                      ++++||||++|||+++|++|+++|  ..|++..|+....      .  .+.++.++++|+++.++++++.+    .++.+
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~------~--~~~~~~~~~~Dls~~~~~~~~~~----~~~~i   68 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD------F--QHDNVQWHALDVTDEAEIKQLSE----QFTQL   68 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc------c--ccCceEEEEecCCCHHHHHHHHH----hcCCC
Confidence            479999999999999999999985  6677767755321      1  13478899999999999887544    45789


Q ss_pred             cEEEEcCCCCCC-------CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCccccc
Q 022103          109 DILVNNAGVSFN-------DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKS  181 (302)
Q Consensus       109 d~lv~~aG~~~~-------~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~  181 (302)
                      |+||||||....       .+.+.+.+.++..+.+|+.+++.+++.++|.|.++ ..++|+++||..+......      
T Consensus        69 d~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~-~~~~i~~iss~~~~~~~~~------  141 (235)
T PRK09009         69 DWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQS-ESAKFAVISAKVGSISDNR------  141 (235)
T ss_pred             CEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhcccc-CCceEEEEeecccccccCC------
Confidence            999999997631       35678889999999999999999999999999876 4578999998665432110      


Q ss_pred             ccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccC--CCcEEEEeecCcccCCCC
Q 022103          182 ILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEG--EGISVNSYCPGFTQTSMT  259 (302)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~--~gI~V~~v~PG~v~T~~~  259 (302)
                                                       .+++..|+++|+++++|+++|+.|+.+  .+|+|++|+||+++|+|.
T Consensus       142 ---------------------------------~~~~~~Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~  188 (235)
T PRK09009        142 ---------------------------------LGGWYSYRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALS  188 (235)
T ss_pred             ---------------------------------CCCcchhhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCC
Confidence                                             223578999999999999999999876  599999999999999997


Q ss_pred             CCC-------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          260 QGQ-------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       260 ~~~-------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                      ...       ...+|+++|..+.+++. ...+..+|.++..++.-
T Consensus       189 ~~~~~~~~~~~~~~~~~~a~~~~~l~~-~~~~~~~g~~~~~~g~~  232 (235)
T PRK09009        189 KPFQQNVPKGKLFTPEYVAQCLLGIIA-NATPAQSGSFLAYDGET  232 (235)
T ss_pred             cchhhccccCCCCCHHHHHHHHHHHHH-cCChhhCCcEEeeCCcC
Confidence            643       23689999999999997 45667899999888763

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.97  E-value=3.7e-29  Score=223.27  Aligned_cols=226  Identities=27%  Similarity=0.371  Sum_probs=193.4

Q ss_pred             CcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCcc
Q 022103           30 ETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALD  109 (302)
Q Consensus        30 ~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id  109 (302)
                      +|+++|||++|+||++++++|+++|++|++++|+.++.+...+++...+.++.++.+|++|.+++.++++++.+.++.+|
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   80 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLD   80 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence            47899999999999999999999999999999998888777777765566788999999999999999999999889999


Q ss_pred             EEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhh
Q 022103          110 ILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEEL  188 (302)
Q Consensus       110 ~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  188 (302)
                      ++||++|.... ...+.++++++.++++|+.+++.+++.+++.|++. ..++||++||..+..+.               
T Consensus        81 ~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-~~~~~v~~ss~~~~~~~---------------  144 (255)
T TIGR01963        81 ILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQ-GWGRIINIASAHGLVAS---------------  144 (255)
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCeEEEEEcchhhcCCC---------------
Confidence            99999997644 44567889999999999999999999999999876 56899999997765432               


Q ss_pred             cHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCC-------
Q 022103          189 SEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG-------  261 (302)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~-------  261 (302)
                                                 +.+..|+.+|++++.+++.++.++.+.+|+|++|+||.++|++...       
T Consensus       145 ---------------------------~~~~~y~~sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~  197 (255)
T TIGR01963       145 ---------------------------PFKSAYVAAKHGLIGLTKVLALEVAAHGITVNAICPGYVRTPLVEKQIADQAK  197 (255)
T ss_pred             ---------------------------CCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHHHHHHhhhc
Confidence                                       2246799999999999999999988889999999999999886321       


Q ss_pred             --------------------CCCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcccC
Q 022103          262 --------------------QGSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVK  299 (302)
Q Consensus       262 --------------------~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  299 (302)
                                          .....++++|+.+++++. ......+|.+|..++++.+
T Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~-~~~~~~~g~~~~~~~g~~~  254 (255)
T TIGR01963       198 TRGIPEEQVIREVMLPGQPTKRFVTVDEVAETALFLAS-DAAAGITGQAIVLDGGWTA  254 (255)
T ss_pred             ccCCCchHHHHHHHHccCccccCcCHHHHHHHHHHHcC-ccccCccceEEEEcCcccc
Confidence                                123678999999999987 3445578999999887654

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.97  E-value=4e-29  Score=222.95  Aligned_cols=223  Identities=26%  Similarity=0.292  Sum_probs=186.3

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEec-ChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTAR-DVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r-~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      ++++++++||||+++||++++++|+++|++|++..| +.+......+.+.+.+.++..+.+|+++.+++..+++++.+.+
T Consensus         3 ~~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (252)
T PRK06077          3 SLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRY   82 (252)
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHc
Confidence            457899999999999999999999999999887765 4455566666666666677889999999999999999999999


Q ss_pred             CCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccc
Q 022103          106 AALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILE  184 (302)
Q Consensus       106 g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~  184 (302)
                      +++|++|||||.... ++.+.+.+.++..+++|+.+++.+++++.+.|.+   .++||++||..+..+.+          
T Consensus        83 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~iv~~sS~~~~~~~~----------  149 (252)
T PRK06077         83 GVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMRE---GGAIVNIASVAGIRPAY----------  149 (252)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhc---CcEEEEEcchhccCCCC----------
Confidence            999999999997543 4566788899999999999999999999999865   37999999988764432          


Q ss_pred             hhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC--
Q 022103          185 DEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ--  262 (302)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~--  262 (302)
                                                      ++..|+++|++++.++++++.++.+ +|++++|.||+++|++....  
T Consensus       150 --------------------------------~~~~Y~~sK~~~~~~~~~l~~~~~~-~i~v~~v~Pg~i~t~~~~~~~~  196 (252)
T PRK06077        150 --------------------------------GLSIYGAMKAAVINLTKYLALELAP-KIRVNAIAPGFVKTKLGESLFK  196 (252)
T ss_pred             --------------------------------CchHHHHHHHHHHHHHHHHHHHHhc-CCEEEEEeeCCccChHHHhhhh
Confidence                                            2478999999999999999999977 89999999999999874321  


Q ss_pred             -----------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          263 -----------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       263 -----------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                                       ...+++++|..+.+++..   ...+|..|..++...
T Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~---~~~~g~~~~i~~g~~  246 (252)
T PRK06077        197 VLGMSEKEFAEKFTLMGKILDPEEVAEFVAAILKI---ESITGQVFVLDSGES  246 (252)
T ss_pred             cccccHHHHHHhcCcCCCCCCHHHHHHHHHHHhCc---cccCCCeEEecCCee
Confidence                             127889999999999852   235787777776643

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=99.97  E-value=3.6e-29  Score=253.46  Aligned_cols=230  Identities=20%  Similarity=0.199  Sum_probs=196.3

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhC--CCceeEEEeeCCCHHHHHHHHHHHHh
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEK--GLPVNFFQLDVSDPSSIEAFVSWFKS  103 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dlt~~~~~~~~~~~~~~  103 (302)
                      ..+++|+++||||++|||+++|++|+++|++|++++|+.+.++...+++...  ..++..+.+|++|+++++++++++.+
T Consensus       410 ~~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~  489 (676)
T TIGR02632       410 KTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVAL  489 (676)
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            3477999999999999999999999999999999999998888777776542  23577899999999999999999999


Q ss_pred             hCCCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccc
Q 022103          104 NFAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSI  182 (302)
Q Consensus       104 ~~g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~  182 (302)
                      .+|++|+||||||.... ++.+.+.++|+..+++|+.+++++++++++.|+++...++||++||..+..+.+        
T Consensus       490 ~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~~--------  561 (676)
T TIGR02632       490 AYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAGK--------  561 (676)
T ss_pred             hcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCCC--------
Confidence            99999999999997653 567788999999999999999999999999998764467999999987765432        


Q ss_pred             cchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccC--CCCC
Q 022103          183 LEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQT--SMTQ  260 (302)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T--~~~~  260 (302)
                                                        ++.+|++||++++.++++++.++++.||+||+|+||.|.|  .++.
T Consensus       562 ----------------------------------~~~aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~  607 (676)
T TIGR02632       562 ----------------------------------NASAYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWD  607 (676)
T ss_pred             ----------------------------------CCHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCceecCccccc
Confidence                                              2478999999999999999999999999999999999864  3321


Q ss_pred             C---------------------------CCCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          261 G---------------------------QGSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       261 ~---------------------------~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                      .                           ....+|+++|..+.+++. +....++|.++.+++...
T Consensus       608 ~~~~~~~~~~~~~~~~~~~~~~~~r~~l~r~v~peDVA~av~~L~s-~~~~~~TG~~i~vDGG~~  671 (676)
T TIGR02632       608 GEWREERAAAYGIPADELEEHYAKRTLLKRHIFPADIAEAVFFLAS-SKSEKTTGCIITVDGGVP  671 (676)
T ss_pred             ccchhhhhhcccCChHHHHHHHHhcCCcCCCcCHHHHHHHHHHHhC-CcccCCcCcEEEECCCch
Confidence            1                           012678999999999986 456779999999998754

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.97  E-value=3.7e-29  Score=220.49  Aligned_cols=218  Identities=24%  Similarity=0.297  Sum_probs=179.5

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCccE
Q 022103           31 TIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDI  110 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id~  110 (302)
                      |+++|||+++|||+++++.|+++|++|++++|+.++.+.. +++    .++.++.+|++|.++++++++.+..  +++|+
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~-~~~----~~~~~~~~D~~d~~~~~~~~~~~~~--~~id~   74 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTAL-QAL----PGVHIEKLDMNDPASLDQLLQRLQG--QRFDL   74 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHH-Hhc----cccceEEcCCCCHHHHHHHHHHhhc--CCCCE
Confidence            6899999999999999999999999999999998765443 222    2567888999999999999998864  47999


Q ss_pred             EEEcCCCCCC---CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhh
Q 022103          111 LVNNAGVSFN---DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEE  187 (302)
Q Consensus       111 lv~~aG~~~~---~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~  187 (302)
                      ||||||....   ++.+.+.++++..+.+|+.+++.+++++++.+.+.  .++++++||..+..+...            
T Consensus        75 vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~~iv~~ss~~g~~~~~~------------  140 (225)
T PRK08177         75 LFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPG--QGVLAFMSSQLGSVELPD------------  140 (225)
T ss_pred             EEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhc--CCEEEEEccCccccccCC------------
Confidence            9999997532   45778899999999999999999999999998753  578999999776543221            


Q ss_pred             hcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCCCCCCH
Q 022103          188 LSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTA  267 (302)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~~~~~~  267 (302)
                                                 +..+..|+++|++++.++++++.|+.++||+|+.|+||+++|+|.......++
T Consensus       141 ---------------------------~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~~~~~~~~~~~  193 (225)
T PRK08177        141 ---------------------------GGEMPLYKASKAALNSMTRSFVAELGEPTLTVLSMHPGWVKTDMGGDNAPLDV  193 (225)
T ss_pred             ---------------------------CCCccchHHHHHHHHHHHHHHHHHhhcCCeEEEEEcCCceecCCCCCCCCCCH
Confidence                                       12346799999999999999999999999999999999999999887777788


Q ss_pred             HHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          268 DEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       268 ~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                      ++.+..++..+.. ...-.++.++.+.++.
T Consensus       194 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  222 (225)
T PRK08177        194 ETSVKGLVEQIEA-ASGKGGHRFIDYQGET  222 (225)
T ss_pred             HHHHHHHHHHHHh-CCccCCCceeCcCCcC
Confidence            8888888888763 3333555556666653

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.97  E-value=3.2e-29  Score=253.32  Aligned_cols=211  Identities=28%  Similarity=0.369  Sum_probs=185.6

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      ..+++|+++||||++|||+++++.|+++|++|++++|+.+++++..+++.+.+.++.++.+|++|.++++++++++.+.+
T Consensus       367 ~~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  446 (657)
T PRK07201        367 GPLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEH  446 (657)
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhc
Confidence            35789999999999999999999999999999999999999988888887777789999999999999999999999999


Q ss_pred             CCccEEEEcCCCCCC-CCCCC--CHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccc
Q 022103          106 AALDILVNNAGVSFN-DIYKN--TVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSI  182 (302)
Q Consensus       106 g~id~lv~~aG~~~~-~~~~~--~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~  182 (302)
                      +.+|++|||||.... .+.+.  +.++++.++++|+.+++.+++.++|.|.++ +.++||++||..+..+.+        
T Consensus       447 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~~~~--------  517 (657)
T PRK07201        447 GHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRER-RFGHVVNVSSIGVQTNAP--------  517 (657)
T ss_pred             CCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhc-CCCEEEEECChhhcCCCC--------
Confidence            999999999997533 22222  358899999999999999999999999877 568999999988764422        


Q ss_pred             cchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC
Q 022103          183 LEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ  262 (302)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~  262 (302)
                                                        ++..|++||+++++|+++++.|+.+.||+|++|+||+|+|+|....
T Consensus       518 ----------------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~~  563 (657)
T PRK07201        518 ----------------------------------RFSAYVASKAALDAFSDVAASETLSDGITFTTIHMPLVRTPMIAPT  563 (657)
T ss_pred             ----------------------------------CcchHHHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccccCcc
Confidence                                              2467999999999999999999999999999999999999997653


Q ss_pred             ------CCCCHHHHHHHHHHHhh
Q 022103          263 ------GSHTADEAADVGARLLL  279 (302)
Q Consensus       263 ------~~~~~~~~a~~~~~l~~  279 (302)
                            ...+|+++|..++..+.
T Consensus       564 ~~~~~~~~~~~~~~a~~i~~~~~  586 (657)
T PRK07201        564 KRYNNVPTISPEEAADMVVRAIV  586 (657)
T ss_pred             ccccCCCCCCHHHHHHHHHHHHH
Confidence                  23689999999998765

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.97  E-value=7.4e-29  Score=223.11  Aligned_cols=207  Identities=31%  Similarity=0.449  Sum_probs=181.8

Q ss_pred             CcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCcc
Q 022103           30 ETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALD  109 (302)
Q Consensus        30 ~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id  109 (302)
                      +++++||||+||||+++++.|+++|++|++++|+..+.++..+.+...+.++.++.+|++|++++.++++++.++++++|
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   80 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGID   80 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            47899999999999999999999999999999998888888777776677888999999999999999999999999999


Q ss_pred             EEEEcCCCCCC-CCCCC-CHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhh
Q 022103          110 ILVNNAGVSFN-DIYKN-TVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEE  187 (302)
Q Consensus       110 ~lv~~aG~~~~-~~~~~-~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~  187 (302)
                      ++|||+|.... .+.+. +.+.++..+++|+.+++++++.+++.|.+.  .++||++||..+..+.+             
T Consensus        81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~--~~~iv~~sS~~~~~~~~-------------  145 (263)
T PRK06181         81 ILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKAS--RGQIVVVSSLAGLTGVP-------------  145 (263)
T ss_pred             EEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc--CCEEEEEecccccCCCC-------------
Confidence            99999997644 45666 889999999999999999999999998765  58999999988764432             


Q ss_pred             hcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC-----
Q 022103          188 LSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ-----  262 (302)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~-----  262 (302)
                                                   ++..|+++|++++.++++++.++.+.||++++|.||.+.|++....     
T Consensus       146 -----------------------------~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~~~  196 (263)
T PRK06181        146 -----------------------------TRSGYAASKHALHGFFDSLRIELADDGVAVTVVCPGFVATDIRKRALDGDG  196 (263)
T ss_pred             -----------------------------CccHHHHHHHHHHHHHHHHHHHhhhcCceEEEEecCccccCcchhhccccc
Confidence                                         2367999999999999999999988999999999999999875421     


Q ss_pred             -----------CCCCHHHHHHHHHHHhhc
Q 022103          263 -----------GSHTADEAADVGARLLLL  280 (302)
Q Consensus       263 -----------~~~~~~~~a~~~~~l~~~  280 (302)
                                 ...+++++|..+.+++..
T Consensus       197 ~~~~~~~~~~~~~~~~~dva~~i~~~~~~  225 (263)
T PRK06181        197 KPLGKSPMQESKIMSAEECAEAILPAIAR  225 (263)
T ss_pred             cccccccccccCCCCHHHHHHHHHHHhhC
Confidence                       236899999999999874

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.7e-28  Score=217.09  Aligned_cols=220  Identities=30%  Similarity=0.366  Sum_probs=188.4

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      +.+++++||||+|+||++++++|+++|++|++++|+++++++..+++.+. .++.++.+|+++.+++.++++++.+.++.
T Consensus         4 ~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (237)
T PRK07326          4 LKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNK-GNVLGLAADVRDEADVQRAVDAIVAAFGG   82 (237)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhcc-CcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            56899999999999999999999999999999999998888887877654 57889999999999999999999999999


Q ss_pred             ccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchh
Q 022103          108 LDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDE  186 (302)
Q Consensus       108 id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~  186 (302)
                      +|+|||++|.... .+.+.+.+++++++++|+.+++.+++++++.|.+  ..++||++||..+..+..            
T Consensus        83 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~~iv~~ss~~~~~~~~------------  148 (237)
T PRK07326         83 LDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKR--GGGYIINISSLAGTNFFA------------  148 (237)
T ss_pred             CCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHH--CCeEEEEECChhhccCCC------------
Confidence            9999999997644 4667899999999999999999999999999844  358999999987653321            


Q ss_pred             hhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCCC---
Q 022103          187 ELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQG---  263 (302)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~~---  263 (302)
                                                    ....|+.+|++++.+++.++.++...|++++.|+||.+.|++.....   
T Consensus       149 ------------------------------~~~~y~~sk~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~  198 (237)
T PRK07326        149 ------------------------------GGAAYNASKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATHFNGHTPSEK  198 (237)
T ss_pred             ------------------------------CCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeccccCcccccccchh
Confidence                                          23679999999999999999999888999999999999998865432   


Q ss_pred             ---CCCHHHHHHHHHHHhhcCCCCCCCcceeec
Q 022103          264 ---SHTADEAADVGARLLLLHPQQLPTAKFYIG  293 (302)
Q Consensus       264 ---~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~  293 (302)
                         ..++++++..+.+++.. +.+...+.+.+-
T Consensus       199 ~~~~~~~~d~a~~~~~~l~~-~~~~~~~~~~~~  230 (237)
T PRK07326        199 DAWKIQPEDIAQLVLDLLKM-PPRTLPSKIEVR  230 (237)
T ss_pred             hhccCCHHHHHHHHHHHHhC-CccccccceEEe
Confidence               25789999999999874 445466666553

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2.9e-29  Score=223.70  Aligned_cols=224  Identities=22%  Similarity=0.223  Sum_probs=181.6

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChh-hHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVE-RGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~-~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      +++|+++||||+||||++++++|+++|++|++++|+.+ ..+...++++..+.++.++.+|+++.+++.++++++.+.++
T Consensus         4 ~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   83 (248)
T PRK07806          4 LPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFG   83 (248)
T ss_pred             CCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence            67899999999999999999999999999999999753 55666666666566788999999999999999999999889


Q ss_pred             CccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchh
Q 022103          107 ALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDE  186 (302)
Q Consensus       107 ~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~  186 (302)
                      .+|++|||||.....     ..+++..+++|+.+++++++++.+.|.+   .++||++||..+......           
T Consensus        84 ~~d~vi~~ag~~~~~-----~~~~~~~~~vn~~~~~~l~~~~~~~~~~---~~~iv~isS~~~~~~~~~-----------  144 (248)
T PRK07806         84 GLDALVLNASGGMES-----GMDEDYAMRLNRDAQRNLARAALPLMPA---GSRVVFVTSHQAHFIPTV-----------  144 (248)
T ss_pred             CCcEEEECCCCCCCC-----CCCcceeeEeeeHHHHHHHHHHHhhccC---CceEEEEeCchhhcCccc-----------
Confidence            999999999864321     1124568999999999999999999854   379999999654311000           


Q ss_pred             hhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC----
Q 022103          187 ELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ----  262 (302)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~----  262 (302)
                                               .+ .+.+..|++||++++.++++++.++++.||+|++|+||++.|++....    
T Consensus       145 -------------------------~~-~~~~~~Y~~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~  198 (248)
T PRK07806        145 -------------------------KT-MPEYEPVARSKRAGEDALRALRPELAEKGIGFVVVSGDMIEGTVTATLLNRL  198 (248)
T ss_pred             -------------------------cC-CccccHHHHHHHHHHHHHHHHHHHhhccCeEEEEeCCccccCchhhhhhccC
Confidence                                     00 122468999999999999999999999999999999999998764321    


Q ss_pred             -------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcccC
Q 022103          263 -------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVK  299 (302)
Q Consensus       263 -------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  299 (302)
                                   ...+++++|..+++++.   ...++|+.|..++++..
T Consensus       199 ~~~~~~~~~~~~~~~~~~~dva~~~~~l~~---~~~~~g~~~~i~~~~~~  245 (248)
T PRK07806        199 NPGAIEARREAAGKLYTVSEFAAEVARAVT---APVPSGHIEYVGGADYF  245 (248)
T ss_pred             CHHHHHHHHhhhcccCCHHHHHHHHHHHhh---ccccCccEEEecCccce
Confidence                         23689999999999986   23578999999988653

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=99.97  E-value=1.3e-28  Score=219.85  Aligned_cols=220  Identities=36%  Similarity=0.415  Sum_probs=178.1

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhh--HHHHHHHHhhCC-CceeEEEeeCCC-HHHHHHHHHHHH
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVER--GQRAVESLSEKG-LPVNFFQLDVSD-PSSIEAFVSWFK  102 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~--~~~~~~~l~~~~-~~~~~~~~Dlt~-~~~~~~~~~~~~  102 (302)
                      .+++|+++||||++|||+++|+.|+++|++|+++.|+.+.  .+...+.....+ ..+.+..+|+++ .++++.+++.+.
T Consensus         2 ~~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~   81 (251)
T COG1028           2 DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAE   81 (251)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHH
Confidence            4678999999999999999999999999998888887654  344444333222 267888899998 999999999999


Q ss_pred             hhCCCccEEEEcCCCCC--CCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccc
Q 022103          103 SNFAALDILVNNAGVSF--NDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIK  180 (302)
Q Consensus       103 ~~~g~id~lv~~aG~~~--~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~  180 (302)
                      ..+|.+|++|||||...  .++.+.+.++|++++++|+.+.+.+++.+.|.+. . +  +||++||..+. +.+.     
T Consensus        82 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~-~-~--~Iv~isS~~~~-~~~~-----  151 (251)
T COG1028          82 EEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMK-K-Q--RIVNISSVAGL-GGPP-----  151 (251)
T ss_pred             HHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhh-h-C--eEEEECCchhc-CCCC-----
Confidence            99999999999999876  3678889999999999999999999998888887 3 3  99999999886 4321     


Q ss_pred             cccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCC
Q 022103          181 SILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ  260 (302)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~  260 (302)
                                                          .+.+|++||+|+++|+++++.|+.++||+|++|+||++.|++..
T Consensus       152 ------------------------------------~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~t~~~~  195 (251)
T COG1028         152 ------------------------------------GQAAYAASKAALIGLTKALALELAPRGIRVNAVAPGYIDTPMTA  195 (251)
T ss_pred             ------------------------------------CcchHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCCCcchh
Confidence                                                03789999999999999999999999999999999999999987


Q ss_pred             CCC------------------CCCHHHHHHHHHHHhhcCCCCCCCcceee
Q 022103          261 GQG------------------SHTADEAADVGARLLLLHPQQLPTAKFYI  292 (302)
Q Consensus       261 ~~~------------------~~~~~~~a~~~~~l~~~~~~~~~~G~~~~  292 (302)
                      ...                  ...|.+++..+.++.......+..|....
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  245 (251)
T COG1028         196 ALESAELEALKRLAARIPLGRLGTPEEVAAAVAFLASDEAASYITGQTLP  245 (251)
T ss_pred             hhhhhhhhHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcchhccccCCEEE
Confidence            432                  23467777777766532223345555544

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.97  E-value=4.6e-30  Score=218.51  Aligned_cols=185  Identities=27%  Similarity=0.385  Sum_probs=164.7

Q ss_pred             ccCcEEEEeCCC-chHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHh-hC
Q 022103           28 SKETIAIVTGAN-KGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKS-NF  105 (302)
Q Consensus        28 ~~~k~vlItGas-~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~-~~  105 (302)
                      ...|.|+|||++ ||||.++|+.|++.|+.|+++.|+.+.-+....+.     .+.+..+|+++++++..+..+++. .+
T Consensus         5 ~~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~-----gl~~~kLDV~~~~~V~~v~~evr~~~~   79 (289)
T KOG1209|consen    5 SQPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQF-----GLKPYKLDVSKPEEVVTVSGEVRANPD   79 (289)
T ss_pred             cCCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhh-----CCeeEEeccCChHHHHHHHHHHhhCCC
Confidence            456889999986 99999999999999999999999987766554332     488999999999999999999998 68


Q ss_pred             CCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccc
Q 022103          106 AALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILE  184 (302)
Q Consensus       106 g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~  184 (302)
                      |++|+|+||||.... +..+.+.++.+++|++|++|+++++|++...+-++  +|.||+++|+.+..+.+          
T Consensus        80 Gkld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~lika--KGtIVnvgSl~~~vpfp----------  147 (289)
T KOG1209|consen   80 GKLDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKA--KGTIVNVGSLAGVVPFP----------  147 (289)
T ss_pred             CceEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHc--cceEEEecceeEEeccc----------
Confidence            999999999997644 67889999999999999999999999999877775  79999999999876643          


Q ss_pred             hhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCC
Q 022103          185 DEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG  261 (302)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~  261 (302)
                                              |.        +.|++||+|++++++.|+.|++++||+|..+.||.|.|++...
T Consensus       148 ------------------------f~--------~iYsAsKAAihay~~tLrlEl~PFgv~Vin~itGGv~T~Ia~k  192 (289)
T KOG1209|consen  148 ------------------------FG--------SIYSASKAAIHAYARTLRLELKPFGVRVINAITGGVATDIADK  192 (289)
T ss_pred             ------------------------hh--------hhhhHHHHHHHHhhhhcEEeeeccccEEEEecccceecccccC
Confidence                                    22        7899999999999999999999999999999999999998654

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.97  E-value=3.6e-28  Score=215.30  Aligned_cols=227  Identities=30%  Similarity=0.358  Sum_probs=192.5

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChh-hHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVE-RGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~-~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      ++.++++||||+|+||+++++.|+++|++|+++.|+.. ..+...+.+...+.++.++.+|+++.+++.++++++.+.++
T Consensus         4 ~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~   83 (249)
T PRK12825          4 LMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERFG   83 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcC
Confidence            45689999999999999999999999999887666554 44555556665566789999999999999999999988889


Q ss_pred             CccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccch
Q 022103          107 ALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILED  185 (302)
Q Consensus       107 ~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~  185 (302)
                      .+|.+||++|.... .+.+.+.+++++.+++|+.+++++++.+.+.+.+. +.+++|++||..+..+..           
T Consensus        84 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~~i~~SS~~~~~~~~-----------  151 (249)
T PRK12825         84 RIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQ-RGGRIVNISSVAGLPGWP-----------  151 (249)
T ss_pred             CCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCEEEEECccccCCCCC-----------
Confidence            99999999997644 45677899999999999999999999999999876 578999999988764422           


Q ss_pred             hhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC---
Q 022103          186 EELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ---  262 (302)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~---  262 (302)
                                                     .+..|+.+|++++.+++.++.++...||+++.|+||.++|++....   
T Consensus       152 -------------------------------~~~~y~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~  200 (249)
T PRK12825        152 -------------------------------GRSNYAAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEATIEE  200 (249)
T ss_pred             -------------------------------CchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCccccccch
Confidence                                           2367999999999999999999988899999999999999986542   


Q ss_pred             ------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          263 ------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       263 ------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                                  ...++++++..+.+++. ......+|++|..++.+.
T Consensus       201 ~~~~~~~~~~~~~~~~~~dva~~~~~~~~-~~~~~~~g~~~~i~~g~~  247 (249)
T PRK12825        201 AREAKDAETPLGRSGTPEDIARAVAFLCS-DASDYITGQVIEVTGGVD  247 (249)
T ss_pred             hHHhhhccCCCCCCcCHHHHHHHHHHHhC-ccccCcCCCEEEeCCCEe
Confidence                        12568999999999986 455678999999988754

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2e-28  Score=219.81  Aligned_cols=225  Identities=26%  Similarity=0.265  Sum_probs=189.9

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      +++++++||||+|+||++++++|+++|++|++++|+.+..+...+.....  ++.++.+|++|++++..+++++.+.+++
T Consensus         9 ~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~~~   86 (264)
T PRK12829          9 LDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGA--KVTATVADVADPAQVERVFDTAVERFGG   86 (264)
T ss_pred             cCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcC--ceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            78899999999999999999999999999999999987777666555432  6788999999999999999999998999


Q ss_pred             ccEEEEcCCCCCC--CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccch
Q 022103          108 LDILVNNAGVSFN--DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILED  185 (302)
Q Consensus       108 id~lv~~aG~~~~--~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~  185 (302)
                      +|+|||++|....  .....+.+++++++++|+.+++.+++.+++.+......++|+++||..+..+.+           
T Consensus        87 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~~~-----------  155 (264)
T PRK12829         87 LDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLGYP-----------  155 (264)
T ss_pred             CCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccccCCC-----------
Confidence            9999999998632  356788899999999999999999999999888763337789988877654422           


Q ss_pred             hhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC---
Q 022103          186 EELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ---  262 (302)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~---  262 (302)
                                                     .+..|+.+|++++.+++.++.++...++++++|+||+++|++....   
T Consensus       156 -------------------------------~~~~y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~~~~~  204 (264)
T PRK12829        156 -------------------------------GRTPYAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMRRVIEA  204 (264)
T ss_pred             -------------------------------CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHHHHhhh
Confidence                                           2357999999999999999999888899999999999998875321   


Q ss_pred             -----------------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          263 -----------------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       263 -----------------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                                             ...++++++..+..++. +.....+|.+|..++..
T Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~-~~~~~~~g~~~~i~~g~  261 (264)
T PRK12829        205 RAQQLGIGLDEMEQEYLEKISLGRMVEPEDIAATALFLAS-PAARYITGQAISVDGNV  261 (264)
T ss_pred             hhhccCCChhHHHHHHHhcCCCCCCCCHHHHHHHHHHHcC-ccccCccCcEEEeCCCc
Confidence                                   23678999999988875 44556789999888765

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.97  E-value=1.5e-30  Score=215.10  Aligned_cols=223  Identities=25%  Similarity=0.312  Sum_probs=195.6

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      .+.+|-+++||||.+|+|++.|.+|+++|+.|++.+.-+.+.++.++++   |+++.+.++|++++++++..+...+.+|
T Consensus         5 rs~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakel---g~~~vf~padvtsekdv~aala~ak~kf   81 (260)
T KOG1199|consen    5 RSTKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKEL---GGKVVFTPADVTSEKDVRAALAKAKAKF   81 (260)
T ss_pred             hhhcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHh---CCceEEeccccCcHHHHHHHHHHHHhhc
Confidence            3568899999999999999999999999999999999999999999988   5689999999999999999999999999


Q ss_pred             CCccEEEEcCCCCCC-------CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCC-----CCCcEEEecCCCccccc
Q 022103          106 AALDILVNNAGVSFN-------DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSP-----SKSRILNISSRLGTLSK  173 (302)
Q Consensus       106 g~id~lv~~aG~~~~-------~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~-----~~~~iv~vsS~~~~~~~  173 (302)
                      |++|.+|||||+...       +-...+.|++++++++|++|+|++++...-.|-+++     +.|.||+..|.+...+.
T Consensus        82 grld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafdgq  161 (260)
T KOG1199|consen   82 GRLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFDGQ  161 (260)
T ss_pred             cceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeecCc
Confidence            999999999998532       224468899999999999999999999999998763     45789999999988776


Q ss_pred             ccCcccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCc
Q 022103          174 VRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGF  253 (302)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~  253 (302)
                      ..+                                          .+|++||.++.+++.-+++.++..|||+++|.||.
T Consensus       162 ~gq------------------------------------------aaysaskgaivgmtlpiardla~~gir~~tiapgl  199 (260)
T KOG1199|consen  162 TGQ------------------------------------------AAYSASKGAIVGMTLPIARDLAGDGIRFNTIAPGL  199 (260)
T ss_pred             cch------------------------------------------hhhhcccCceEeeechhhhhcccCceEEEeecccc
Confidence            543                                          78999999999999999999999999999999999


Q ss_pred             ccCCCCCCCC----------------CCCHHHHHHHHHHHhhcCCCCCCCcceeecCCc
Q 022103          254 TQTSMTQGQG----------------SHTADEAADVGARLLLLHPQQLPTAKFYIGLDP  296 (302)
Q Consensus       254 v~T~~~~~~~----------------~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  296 (302)
                      ++||+...+.                ...|.|.++.+..+..   ..+.+|.++-.+|-
T Consensus       200 f~tpllsslpekv~~fla~~ipfpsrlg~p~eyahlvqaiie---np~lngevir~dga  255 (260)
T KOG1199|consen  200 FDTPLLSSLPEKVKSFLAQLIPFPSRLGHPHEYAHLVQAIIE---NPYLNGEVIRFDGA  255 (260)
T ss_pred             cCChhhhhhhHHHHHHHHHhCCCchhcCChHHHHHHHHHHHh---CcccCCeEEEecce
Confidence            9999987652                2567888887777764   45688998887764

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.97  E-value=3.6e-28  Score=220.47  Aligned_cols=204  Identities=23%  Similarity=0.296  Sum_probs=173.7

Q ss_pred             CcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCcc
Q 022103           30 ETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALD  109 (302)
Q Consensus        30 ~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id  109 (302)
                      .|+++||||+||||++++++|+++|++|++++|+.+.++...+++   +.++.++.+|++|.+++.++++++.+.++++|
T Consensus         2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   78 (276)
T PRK06482          2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARY---GDRLWVLQLDVTDSAAVRAVVDRAFAALGRID   78 (276)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc---cCceEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            378999999999999999999999999999999987766655443   34688999999999999999999988889999


Q ss_pred             EEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhh
Q 022103          110 ILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEEL  188 (302)
Q Consensus       110 ~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  188 (302)
                      +||||||.... +..+.+.+++++.+++|+.++++++++++|+|+++ ..++||++||..+..+.               
T Consensus        79 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-~~~~iv~~sS~~~~~~~---------------  142 (276)
T PRK06482         79 VVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQ-GGGRIVQVSSEGGQIAY---------------  142 (276)
T ss_pred             EEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCEEEEEcCcccccCC---------------
Confidence            99999998654 45677889999999999999999999999999876 56899999997765332               


Q ss_pred             cHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCCC-----
Q 022103          189 SEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQG-----  263 (302)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~~-----  263 (302)
                                                 +++..|++||++++.++++++.++.++||+|+.|+||.+.|++.....     
T Consensus       143 ---------------------------~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~  195 (276)
T PRK06482        143 ---------------------------PGFSLYHATKWGIEGFVEAVAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPL  195 (276)
T ss_pred             ---------------------------CCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCccccCCcccccccCCC
Confidence                                       224789999999999999999999889999999999999998754321     


Q ss_pred             ----------------------CCCHHHHHHHHHHHhh
Q 022103          264 ----------------------SHTADEAADVGARLLL  279 (302)
Q Consensus       264 ----------------------~~~~~~~a~~~~~l~~  279 (302)
                                            ..++++++..++..+.
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~a~~~~~~  233 (276)
T PRK06482        196 DAYDDTPVGDLRRALADGSFAIPGDPQKMVQAMIASAD  233 (276)
T ss_pred             ccccchhhHHHHHHHhhccCCCCCCHHHHHHHHHHHHc
Confidence                                  0367888888777765

>PRK08324 short chain dehydrogenase; Validated

Probab=99.97  E-value=2.7e-28  Score=247.68  Aligned_cols=229  Identities=24%  Similarity=0.219  Sum_probs=199.1

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      .++||+++||||+||||+++++.|+++|++|++++|+.++++...+++... ..+.++.+|+++++++.++++++.+.+|
T Consensus       419 ~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~-~~v~~v~~Dvtd~~~v~~~~~~~~~~~g  497 (681)
T PRK08324        419 PLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGP-DRALGVACDVTDEAAVQAAFEEAALAFG  497 (681)
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhcc-CcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            467899999999999999999999999999999999998888888777654 5788999999999999999999999999


Q ss_pred             CccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccch
Q 022103          107 ALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILED  185 (302)
Q Consensus       107 ~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~  185 (302)
                      ++|++|||||.... ++.+.+.+.|+..+++|+.+++.+++++++.|++++..++||++||..+..+.+           
T Consensus       498 ~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~~-----------  566 (681)
T PRK08324        498 GVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPGP-----------  566 (681)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCCC-----------
Confidence            99999999997654 567789999999999999999999999999998863348999999988765432           


Q ss_pred             hhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcc--cCCCCCCC-
Q 022103          186 EELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFT--QTSMTQGQ-  262 (302)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v--~T~~~~~~-  262 (302)
                                                     ++.+|+++|++++.++++++.++.+.||+|++|+||.+  .|+++... 
T Consensus       567 -------------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~~~  615 (681)
T PRK08324        567 -------------------------------NFGAYGAAKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWTGEW  615 (681)
T ss_pred             -------------------------------CcHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCccccchh
Confidence                                           24679999999999999999999999999999999999  78765321 


Q ss_pred             --------------------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcccC
Q 022103          263 --------------------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVK  299 (302)
Q Consensus       263 --------------------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  299 (302)
                                                ....++++|..+.+++. +.....+|.++..+++...
T Consensus       616 ~~~~~~~~g~~~~~~~~~~~~~~~l~~~v~~~DvA~a~~~l~s-~~~~~~tG~~i~vdgG~~~  677 (681)
T PRK08324        616 IEARAAAYGLSEEELEEFYRARNLLKREVTPEDVAEAVVFLAS-GLLSKTTGAIITVDGGNAA  677 (681)
T ss_pred             hhhhhhhccCChHHHHHHHHhcCCcCCccCHHHHHHHHHHHhC-ccccCCcCCEEEECCCchh
Confidence                                      12678999999999986 4566789999999887654

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=99.97  E-value=4.6e-29  Score=224.33  Aligned_cols=207  Identities=28%  Similarity=0.407  Sum_probs=179.4

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhC-CCceeEEEeeCCCHHH-HHHHHHHHHhhC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEK-GLPVNFFQLDVSDPSS-IEAFVSWFKSNF  105 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dlt~~~~-~~~~~~~~~~~~  105 (302)
                      --|++++||||++|||++.|+.||++|++|++++|++++++.++++|.+. +.++..+.+|+++.++ .+++.+.+..  
T Consensus        47 ~~g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~--  124 (312)
T KOG1014|consen   47 KLGSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAG--  124 (312)
T ss_pred             hcCCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcC--
Confidence            33589999999999999999999999999999999999999999999865 3578999999998876 3333333332  


Q ss_pred             CCccEEEEcCCCCCC---CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccc
Q 022103          106 AALDILVNNAGVSFN---DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSI  182 (302)
Q Consensus       106 g~id~lv~~aG~~~~---~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~  182 (302)
                      ..|-+||||+|...+   .+.+.+.+..++.+.+|+.+...+++.++|.|.++ ++|-||+++|.++..+.+        
T Consensus       125 ~~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r-~~G~IvnigS~ag~~p~p--------  195 (312)
T KOG1014|consen  125 LDVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVER-KKGIIVNIGSFAGLIPTP--------  195 (312)
T ss_pred             CceEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcC-CCceEEEeccccccccCh--------
Confidence            378889999998763   47778888999999999999999999999999987 789999999999987643        


Q ss_pred             cchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC
Q 022103          183 LEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ  262 (302)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~  262 (302)
                                                        .++.|++||+.++.|+++|.+||..+||.|-+|.|.+|.|+|....
T Consensus       196 ----------------------------------~~s~ysasK~~v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm~~~~  241 (312)
T KOG1014|consen  196 ----------------------------------LLSVYSASKAFVDFFSRCLQKEYESKGIFVQSVIPYLVATKMAKYR  241 (312)
T ss_pred             ----------------------------------hHHHHHHHHHHHHHHHHHHHHHHHhcCeEEEEeehhheeccccccC
Confidence                                              3588999999999999999999999999999999999999997754


Q ss_pred             C----CCCHHHHHHHHHHHhh
Q 022103          263 G----SHTADEAADVGARLLL  279 (302)
Q Consensus       263 ~----~~~~~~~a~~~~~l~~  279 (302)
                      .    -.+|+..|...+.-+.
T Consensus       242 ~~sl~~ps~~tfaksal~tiG  262 (312)
T KOG1014|consen  242 KPSLFVPSPETFAKSALNTIG  262 (312)
T ss_pred             CCCCcCcCHHHHHHHHHhhcC
Confidence            3    3778888888877765

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.97  E-value=4.9e-28  Score=213.84  Aligned_cols=221  Identities=33%  Similarity=0.428  Sum_probs=188.5

Q ss_pred             EEEeCCCchHHHHHHHHHHHcCCEEEEEecCh-hhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCccEE
Q 022103           33 AIVTGANKGIGFALVKRLAELGLTVILTARDV-ERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDIL  111 (302)
Q Consensus        33 vlItGas~gIG~ala~~l~~~G~~V~l~~r~~-~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id~l  111 (302)
                      ++|||++|+||.++++.|+++|++|++++|+. +.++...+.+...+.++.++.+|++|+++++++++++.+.++++|++
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   80 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDIL   80 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            58999999999999999999999999999875 45555666666666678899999999999999999999988999999


Q ss_pred             EEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhhcH
Q 022103          112 VNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSE  190 (302)
Q Consensus       112 v~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~  190 (302)
                      ||++|.... .+.+.+.+.+++.+++|+.+++.+++.+.+.+.+. ..++++++||..+..+.+.               
T Consensus        81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~~v~~sS~~~~~g~~~---------------  144 (239)
T TIGR01830        81 VNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQ-RSGRIINISSVVGLMGNAG---------------  144 (239)
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCeEEEEECCccccCCCCC---------------
Confidence            999998654 35667889999999999999999999999998765 4689999999887655322               


Q ss_pred             HHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC--------
Q 022103          191 EQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ--------  262 (302)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~--------  262 (302)
                                                 +..|+.+|++++.+++.++.++...|++++.++||.++|++....        
T Consensus       145 ---------------------------~~~y~~~k~a~~~~~~~l~~~~~~~g~~~~~i~pg~~~~~~~~~~~~~~~~~~  197 (239)
T TIGR01830       145 ---------------------------QANYAASKAGVIGFTKSLAKELASRNITVNAVAPGFIDTDMTDKLSEKVKKKI  197 (239)
T ss_pred             ---------------------------CchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCCCChhhhhcChHHHHHH
Confidence                                       367999999999999999999988899999999999999875432        


Q ss_pred             -------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          263 -------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       263 -------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                             ...++++++..+..++. ......+|++|..++++
T Consensus       198 ~~~~~~~~~~~~~~~a~~~~~~~~-~~~~~~~g~~~~~~~g~  238 (239)
T TIGR01830       198 LSQIPLGRFGTPEEVANAVAFLAS-DEASYITGQVIHVDGGM  238 (239)
T ss_pred             HhcCCcCCCcCHHHHHHHHHHHhC-cccCCcCCCEEEeCCCc
Confidence                   13578999999998885 45567899999887765

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK07578 short chain dehydrogenase; Provisional

Probab=99.96  E-value=1.6e-28  Score=212.49  Aligned_cols=189  Identities=23%  Similarity=0.196  Sum_probs=161.3

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCccEE
Q 022103           32 IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDIL  111 (302)
Q Consensus        32 ~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id~l  111 (302)
                      +++||||++|||+++++.|+++ ++|++++|+..                 .+.+|++++++++++++++    +++|++
T Consensus         2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~-----------------~~~~D~~~~~~~~~~~~~~----~~id~l   59 (199)
T PRK07578          2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSG-----------------DVQVDITDPASIRALFEKV----GKVDAV   59 (199)
T ss_pred             eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC-----------------ceEecCCChHHHHHHHHhc----CCCCEE
Confidence            6999999999999999999999 99999999752                 3679999999999988754    789999


Q ss_pred             EEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhhcH
Q 022103          112 VNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSE  190 (302)
Q Consensus       112 v~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~  190 (302)
                      |||||.... ++.+.+.++|++.+++|+.+++++++++.|+|.+   .++|+++||..+..+.                 
T Consensus        60 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~g~iv~iss~~~~~~~-----------------  119 (199)
T PRK07578         60 VSAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLND---GGSFTLTSGILSDEPI-----------------  119 (199)
T ss_pred             EECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CCeEEEEcccccCCCC-----------------
Confidence            999997543 5667899999999999999999999999999964   3889999998876443                 


Q ss_pred             HHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCC------CCCC
Q 022103          191 EQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ------GQGS  264 (302)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~------~~~~  264 (302)
                                               +.+.+|+++|+++++|+++++.|+ ++||+|++|+||+++|+|..      ....
T Consensus       120 -------------------------~~~~~Y~~sK~a~~~~~~~la~e~-~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~  173 (199)
T PRK07578        120 -------------------------PGGASAATVNGALEGFVKAAALEL-PRGIRINVVSPTVLTESLEKYGPFFPGFEP  173 (199)
T ss_pred             -------------------------CCchHHHHHHHHHHHHHHHHHHHc-cCCeEEEEEcCCcccCchhhhhhcCCCCCC
Confidence                                     234789999999999999999999 88999999999999999743      1234


Q ss_pred             CCHHHHHHHHHHHhhcCCCCCCCcceee
Q 022103          265 HTADEAADVGARLLLLHPQQLPTAKFYI  292 (302)
Q Consensus       265 ~~~~~~a~~~~~l~~~~~~~~~~G~~~~  292 (302)
                      .+++++|..+.+++..    ..+|+.|.
T Consensus       174 ~~~~~~a~~~~~~~~~----~~~g~~~~  197 (199)
T PRK07578        174 VPAARVALAYVRSVEG----AQTGEVYK  197 (199)
T ss_pred             CCHHHHHHHHHHHhcc----ceeeEEec
Confidence            7899999998888752    36777664

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.96  E-value=2.2e-28  Score=217.73  Aligned_cols=198  Identities=24%  Similarity=0.245  Sum_probs=167.5

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCccE
Q 022103           31 TIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDI  110 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id~  110 (302)
                      ++++||||+||||+++++.|+++|++|++++|+.+++++..+.    ..++.++.+|+++.++++++++++..   .+|.
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~---~~d~   74 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQ----SANIFTLAFDVTDHPGTKAALSQLPF---IPEL   74 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHh----cCCCeEEEeeCCCHHHHHHHHHhccc---CCCE
Confidence            6899999999999999999999999999999998776554332    34688899999999999999987743   4799


Q ss_pred             EEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhhc
Q 022103          111 LVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELS  189 (302)
Q Consensus       111 lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~  189 (302)
                      +|+|||.... ...+.+.+++++++++|+.+++++++.+.|.|.+   .++||++||..+..+.+               
T Consensus        75 ~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~iv~isS~~~~~~~~---------------  136 (240)
T PRK06101         75 WIFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSC---GHRVVIVGSIASELALP---------------  136 (240)
T ss_pred             EEEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhc---CCeEEEEechhhccCCC---------------
Confidence            9999986432 3455789999999999999999999999999864   36899999988765432               


Q ss_pred             HHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCCC-----C
Q 022103          190 EEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQG-----S  264 (302)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~~-----~  264 (302)
                                                 ++..|+++|++++.+++.++.|+.++||+|++|+||.++|++.....     .
T Consensus       137 ---------------------------~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~pg~i~t~~~~~~~~~~~~~  189 (240)
T PRK06101        137 ---------------------------RAEAYGASKAAVAYFARTLQLDLRPKGIEVVTVFPGFVATPLTDKNTFAMPMI  189 (240)
T ss_pred             ---------------------------CCchhhHHHHHHHHHHHHHHHHHHhcCceEEEEeCCcCCCCCcCCCCCCCCcc
Confidence                                       24679999999999999999999989999999999999999966431     3


Q ss_pred             CCHHHHHHHHHHHhhc
Q 022103          265 HTADEAADVGARLLLL  280 (302)
Q Consensus       265 ~~~~~~a~~~~~l~~~  280 (302)
                      .++++++..+...+..
T Consensus       190 ~~~~~~a~~i~~~i~~  205 (240)
T PRK06101        190 ITVEQASQEIRAQLAR  205 (240)
T ss_pred             cCHHHHHHHHHHHHhc
Confidence            5899999999888763

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.96  E-value=5.3e-28  Score=214.06  Aligned_cols=225  Identities=20%  Similarity=0.197  Sum_probs=187.9

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      .+++++++||||+|+||.++++.|+++|++|++++|+.++++...+.+... ..+.++.+|+++.+++.++++++...++
T Consensus         2 ~~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   80 (238)
T PRK05786          2 RLKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKY-GNIHYVVGDVSSTESARNVIEKAAKVLN   80 (238)
T ss_pred             CcCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCeEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            467899999999999999999999999999999999998887776666543 3678899999999999999999988889


Q ss_pred             CccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchh
Q 022103          107 ALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDE  186 (302)
Q Consensus       107 ~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~  186 (302)
                      .+|.+++++|...... ..+.++++.++++|+.+++.+++.++|.+.+   .+++|++||..+..+.             
T Consensus        81 ~id~ii~~ag~~~~~~-~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~iv~~ss~~~~~~~-------------  143 (238)
T PRK05786         81 AIDGLVVTVGGYVEDT-VEEFSGLEEMLTNHIKIPLYAVNASLRFLKE---GSSIVLVSSMSGIYKA-------------  143 (238)
T ss_pred             CCCEEEEcCCCcCCCc-hHHHHHHHHHHHHhchHHHHHHHHHHHHHhc---CCEEEEEecchhcccC-------------
Confidence            9999999998754321 1234889999999999999999999999864   3889999997663211             


Q ss_pred             hhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCC-----
Q 022103          187 ELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG-----  261 (302)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~-----  261 (302)
                                                  .+.+..|+++|++++.++++++.++...||++++|+||+++|++...     
T Consensus       144 ----------------------------~~~~~~Y~~sK~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~~~~~~~~  195 (238)
T PRK05786        144 ----------------------------SPDQLSYAVAKAGLAKAVEILASELLGRGIRVNGIAPTTISGDFEPERNWKK  195 (238)
T ss_pred             ----------------------------CCCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCCCCchhhhhh
Confidence                                        11236799999999999999999998889999999999999987532     


Q ss_pred             -----CCCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          262 -----QGSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       262 -----~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                           ....++++++..+.+++. .+....+|.++..++..+
T Consensus       196 ~~~~~~~~~~~~~va~~~~~~~~-~~~~~~~g~~~~~~~~~~  236 (238)
T PRK05786        196 LRKLGDDMAPPEDFAKVIIWLLT-DEADWVDGVVIPVDGGAR  236 (238)
T ss_pred             hccccCCCCCHHHHHHHHHHHhc-ccccCccCCEEEECCccc
Confidence                 123689999999999997 466678999988877654

>PRK09135 pteridine reductase; Provisional

Probab=99.96  E-value=1.5e-27  Score=212.02  Aligned_cols=225  Identities=21%  Similarity=0.251  Sum_probs=183.1

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecCh-hhHHHHHHHHhhC-CCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDV-ERGQRAVESLSEK-GLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~-~~~~~~~~~l~~~-~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      +++++++||||+|+||++++++|+++|++|++++|+. ++.+...+.+... +..+.++.+|+++.+++..+++++.+.+
T Consensus         4 ~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   83 (249)
T PRK09135          4 DSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAF   83 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            4568999999999999999999999999999999864 4455555555443 2357889999999999999999999999


Q ss_pred             CCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccc
Q 022103          106 AALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILE  184 (302)
Q Consensus       106 g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~  184 (302)
                      +.+|+||||||.... ++.+.+.++++.++++|+.+++.+++++.+.+.++  .+++++++|..+..+            
T Consensus        84 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~------------  149 (249)
T PRK09135         84 GRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQ--RGAIVNITDIHAERP------------  149 (249)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhC--CeEEEEEeChhhcCC------------
Confidence            999999999997644 45667889999999999999999999999998765  478888776544322            


Q ss_pred             hhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC--
Q 022103          185 DEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ--  262 (302)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~--  262 (302)
                                                    ++++.+|+.||++++.+++.++.++.+ +|++++|.||++.|++....  
T Consensus       150 ------------------------------~~~~~~Y~~sK~~~~~~~~~l~~~~~~-~i~~~~v~pg~~~~~~~~~~~~  198 (249)
T PRK09135        150 ------------------------------LKGYPVYCAAKAALEMLTRSLALELAP-EVRVNAVAPGAILWPEDGNSFD  198 (249)
T ss_pred             ------------------------------CCCchhHHHHHHHHHHHHHHHHHHHCC-CCeEEEEEeccccCccccccCC
Confidence                                          223478999999999999999999865 79999999999999985431  


Q ss_pred             --------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcccC
Q 022103          263 --------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVK  299 (302)
Q Consensus       263 --------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  299 (302)
                                    ...++++++..+..++. . ....+|.+|..++....
T Consensus       199 ~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~-~-~~~~~g~~~~i~~g~~~  247 (249)
T PRK09135        199 EEARQAILARTPLKRIGTPEDIAEAVRFLLA-D-ASFITGQILAVDGGRSL  247 (249)
T ss_pred             HHHHHHHHhcCCcCCCcCHHHHHHHHHHHcC-c-cccccCcEEEECCCeec
Confidence                          12468999998887765 2 34578999988877543

>PRK07041 short chain dehydrogenase; Provisional

Probab=99.96  E-value=1.1e-27  Score=211.27  Aligned_cols=207  Identities=21%  Similarity=0.255  Sum_probs=173.1

Q ss_pred             EEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCccEEEE
Q 022103           34 IVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDILVN  113 (302)
Q Consensus        34 lItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id~lv~  113 (302)
                      +||||++|||+++++.|+++|++|++++|+.++++...+.+++ +.++.++.+|+++++++.++++++    +++|++||
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~----~~id~li~   75 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGG-GAPVRTAALDITDEAAVDAFFAEA----GPFDHVVI   75 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc-CCceEEEEccCCCHHHHHHHHHhc----CCCCEEEE
Confidence            6999999999999999999999999999998887777776653 557889999999999999988764    78999999


Q ss_pred             cCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhhcHHH
Q 022103          114 NAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQ  192 (302)
Q Consensus       114 ~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (302)
                      |+|.... ++.+.+.+++++++++|+.+++++++  .+.+.   ..++||++||..+..+.+                  
T Consensus        76 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~--~~~~~---~~g~iv~~ss~~~~~~~~------------------  132 (230)
T PRK07041         76 TAADTPGGPVRALPLAAAQAAMDSKFWGAYRVAR--AARIA---PGGSLTFVSGFAAVRPSA------------------  132 (230)
T ss_pred             CCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHh--hhhhc---CCeEEEEECchhhcCCCC------------------
Confidence            9997644 46678899999999999999999999  34443   358999999988764432                  


Q ss_pred             HHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC----------
Q 022103          193 IERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ----------  262 (302)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~----------  262 (302)
                                              ++..|+++|+++++++++++.|+..  |||+.|+||+++|+++...          
T Consensus       133 ------------------------~~~~Y~~sK~a~~~~~~~la~e~~~--irv~~i~pg~~~t~~~~~~~~~~~~~~~~  186 (230)
T PRK07041        133 ------------------------SGVLQGAINAALEALARGLALELAP--VRVNTVSPGLVDTPLWSKLAGDAREAMFA  186 (230)
T ss_pred             ------------------------cchHHHHHHHHHHHHHHHHHHHhhC--ceEEEEeecccccHHHHhhhccchHHHHH
Confidence                                    2367999999999999999999864  9999999999999885421          


Q ss_pred             ---------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          263 ---------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       263 ---------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                               ....|+++|..+.+++. .  .+.+|+.+..++..
T Consensus       187 ~~~~~~~~~~~~~~~dva~~~~~l~~-~--~~~~G~~~~v~gg~  227 (230)
T PRK07041        187 AAAERLPARRVGQPEDVANAILFLAA-N--GFTTGSTVLVDGGH  227 (230)
T ss_pred             HHHhcCCCCCCcCHHHHHHHHHHHhc-C--CCcCCcEEEeCCCe
Confidence                     11458999999999986 2  46889999888864

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.96  E-value=5.3e-27  Score=206.36  Aligned_cols=216  Identities=25%  Similarity=0.290  Sum_probs=178.9

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCccE
Q 022103           31 TIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDI  110 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id~  110 (302)
                      ++++||||+++||+++++.|+++|++|++++|+.++.++..    ..  .+.++.+|+++.++++++++++..  +++|+
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~----~~--~~~~~~~D~~~~~~v~~~~~~~~~--~~~d~   73 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQ----AL--GAEALALDVADPASVAGLAWKLDG--EALDA   73 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHH----hc--cceEEEecCCCHHHHHHHHHHhcC--CCCCE
Confidence            68999999999999999999999999999999987655432    22  356889999999999998887643  47999


Q ss_pred             EEEcCCCCCC---CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhh
Q 022103          111 LVNNAGVSFN---DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEE  187 (302)
Q Consensus       111 lv~~aG~~~~---~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~  187 (302)
                      +|||+|....   ...+.+.++++..+++|+.+++.+++++++.|.+.  .+++++++|..+..+....           
T Consensus        74 vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~-----------  140 (222)
T PRK06953         74 AVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAA--GGVLAVLSSRMGSIGDATG-----------  140 (222)
T ss_pred             EEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhcc--CCeEEEEcCcccccccccC-----------
Confidence            9999998632   35567899999999999999999999999998664  5889999998776543211           


Q ss_pred             hcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCCCCCCH
Q 022103          188 LSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTA  267 (302)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~~~~~~  267 (302)
                                                 + ....|+++|++++.+++.++.++  .+++|++|+||+++|+|..+.....+
T Consensus       141 ---------------------------~-~~~~Y~~sK~a~~~~~~~~~~~~--~~i~v~~v~Pg~i~t~~~~~~~~~~~  190 (222)
T PRK06953        141 ---------------------------T-TGWLYRASKAALNDALRAASLQA--RHATCIALHPGWVRTDMGGAQAALDP  190 (222)
T ss_pred             ---------------------------C-CccccHHhHHHHHHHHHHHhhhc--cCcEEEEECCCeeecCCCCCCCCCCH
Confidence                                       0 01369999999999999999886  47999999999999999887777889


Q ss_pred             HHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          268 DEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       268 ~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                      ++.+..+..++... .....|.+|.++++.+
T Consensus       191 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  220 (222)
T PRK06953        191 AQSVAGMRRVIAQA-TRRDNGRFFQYDGVEL  220 (222)
T ss_pred             HHHHHHHHHHHHhc-CcccCceEEeeCCcCC
Confidence            99999999987644 4678999998887643

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.96  E-value=3.8e-27  Score=210.91  Aligned_cols=182  Identities=25%  Similarity=0.327  Sum_probs=158.4

Q ss_pred             CcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCcc
Q 022103           30 ETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALD  109 (302)
Q Consensus        30 ~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id  109 (302)
                      +|+++||||+||||+++++.|+++|++|++++|+.++.++..+.+...+.++.++.+|++|.+++.+.++      +.+|
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------~~id   75 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAE------WDVD   75 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhc------CCCC
Confidence            5789999999999999999999999999999999887777766666666678899999999998877654      3799


Q ss_pred             EEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhh
Q 022103          110 ILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEEL  188 (302)
Q Consensus       110 ~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  188 (302)
                      +||||||.... ++.+.+.++++..+++|+.+++.+++.+++.+.+. +.++||++||..+..+.               
T Consensus        76 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~~SS~~~~~~~---------------  139 (257)
T PRK09291         76 VLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVAR-GKGKVVFTSSMAGLITG---------------  139 (257)
T ss_pred             EEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCceEEEEcChhhccCC---------------
Confidence            99999997654 56788999999999999999999999999999877 45899999998775432               


Q ss_pred             cHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCC
Q 022103          189 SEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ  260 (302)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~  260 (302)
                                                 ++...|++||++++.+++.++.++.+.||+++.|+||++.|++..
T Consensus       140 ---------------------------~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~~~~v~pg~~~t~~~~  184 (257)
T PRK09291        140 ---------------------------PFTGAYCASKHALEAIAEAMHAELKPFGIQVATVNPGPYLTGFND  184 (257)
T ss_pred             ---------------------------CCcchhHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccccchh
Confidence                                       224679999999999999999999889999999999999998743

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.96  E-value=5.8e-28  Score=202.52  Aligned_cols=162  Identities=38%  Similarity=0.560  Sum_probs=147.7

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecC--hhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           31 TIAIVTGANKGIGFALVKRLAELGL-TVILTARD--VERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~--~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      |+++||||++|||++++++|+++|. +|++++|+  .+..++..+++...+.++.++++|++++++++++++++.+.+++
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP   80 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            7899999999999999999999965 78999999  77888888888888889999999999999999999999999999


Q ss_pred             ccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchh
Q 022103          108 LDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDE  186 (302)
Q Consensus       108 id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~  186 (302)
                      +|++|||+|.... .+.+.+.++|++++++|+.+++++.++++|   +  +.++||++||..+..+.+            
T Consensus        81 ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~---~--~~g~iv~~sS~~~~~~~~------------  143 (167)
T PF00106_consen   81 LDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLP---Q--GGGKIVNISSIAGVRGSP------------  143 (167)
T ss_dssp             ESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH---H--TTEEEEEEEEGGGTSSST------------
T ss_pred             ccccccccccccccccccccchhhhhccccccceeeeeeehhee---c--cccceEEecchhhccCCC------------
Confidence            9999999998765 578889999999999999999999999999   2  479999999999986643            


Q ss_pred             hhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHc
Q 022103          187 ELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRY  239 (302)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~  239 (302)
                                                    ++.+|+++|+|+++|+++|+.|+
T Consensus       144 ------------------------------~~~~Y~askaal~~~~~~la~e~  166 (167)
T PF00106_consen  144 ------------------------------GMSAYSASKAALRGLTQSLAAEL  166 (167)
T ss_dssp             ------------------------------TBHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ------------------------------CChhHHHHHHHHHHHHHHHHHhc
Confidence                                          35789999999999999999985

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.96  E-value=1.9e-27  Score=211.67  Aligned_cols=199  Identities=27%  Similarity=0.342  Sum_probs=163.7

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHH-HHhhC---CC
Q 022103           32 IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSW-FKSNF---AA  107 (302)
Q Consensus        32 ~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~-~~~~~---g~  107 (302)
                      +++||||+||||++++++|+++|++|++++|+.++..     ....+.++.++.+|+++.+++++++.+ +.+.+   +.
T Consensus         3 ~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~~-----~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~   77 (243)
T PRK07023          3 RAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPSL-----AAAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGAS   77 (243)
T ss_pred             eEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchhh-----hhccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCCC
Confidence            6999999999999999999999999999999865311     122345788899999999999998876 55444   47


Q ss_pred             ccEEEEcCCCCCC--CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccch
Q 022103          108 LDILVNNAGVSFN--DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILED  185 (302)
Q Consensus       108 id~lv~~aG~~~~--~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~  185 (302)
                      +|++|||+|....  ++.+.+.+++++.+++|+.+++.+++.+.+.|.++ ..++||++||..+..+.            
T Consensus        78 ~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~isS~~~~~~~------------  144 (243)
T PRK07023         78 RVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDA-AERRILHISSGAARNAY------------  144 (243)
T ss_pred             ceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhcc-CCCEEEEEeChhhcCCC------------
Confidence            9999999997643  46678999999999999999999999999999876 57899999998765432            


Q ss_pred             hhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCC----
Q 022103          186 EELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG----  261 (302)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~----  261 (302)
                                                    +++..|+++|++++++++.++.+ .+.||+|++|+||+++|++...    
T Consensus       145 ------------------------------~~~~~Y~~sK~a~~~~~~~~~~~-~~~~i~v~~v~pg~~~t~~~~~~~~~  193 (243)
T PRK07023        145 ------------------------------AGWSVYCATKAALDHHARAVALD-ANRALRIVSLAPGVVDTGMQATIRAT  193 (243)
T ss_pred             ------------------------------CCchHHHHHHHHHHHHHHHHHhc-CCCCcEEEEecCCccccHHHHHHHhc
Confidence                                          23478999999999999999999 7789999999999999987321    


Q ss_pred             -----------------CCCCCHHHHHHHHHHHhh
Q 022103          262 -----------------QGSHTADEAADVGARLLL  279 (302)
Q Consensus       262 -----------------~~~~~~~~~a~~~~~l~~  279 (302)
                                       ....+|+++|..++..+.
T Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~l~  228 (243)
T PRK07023        194 DEERFPMRERFRELKASGALSTPEDAARRLIAYLL  228 (243)
T ss_pred             ccccchHHHHHHHhhhcCCCCCHHHHHHHHHHHHh
Confidence                             123578999996655554

>PRK08264 short chain dehydrogenase; Validated

Probab=99.96  E-value=9.8e-27  Score=206.13  Aligned_cols=200  Identities=29%  Similarity=0.348  Sum_probs=172.1

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhh
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGL-TVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSN  104 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~  104 (302)
                      +.+.+++++||||+|+||+++|+.|+++|+ +|++++|+.+++++       .+..+.++.+|+++.++++++++.+   
T Consensus         2 ~~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~~~---   71 (238)
T PRK08264          2 MDIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD-------LGPRVVPLQLDVTDPASVAAAAEAA---   71 (238)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh-------cCCceEEEEecCCCHHHHHHHHHhc---
Confidence            347889999999999999999999999999 99999999876543       3457889999999999998887754   


Q ss_pred             CCCccEEEEcCCCC-CC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccc
Q 022103          105 FAALDILVNNAGVS-FN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSI  182 (302)
Q Consensus       105 ~g~id~lv~~aG~~-~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~  182 (302)
                       +.+|++||++|.. .. .+.+.+.+++++.+++|+.+++.+++++.+.+++. +.++||++||..+..+.         
T Consensus        72 -~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~~v~~sS~~~~~~~---------  140 (238)
T PRK08264         72 -SDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAAN-GGGAIVNVLSVLSWVNF---------  140 (238)
T ss_pred             -CCCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCEEEEEcChhhccCC---------
Confidence             6799999999983 33 46778999999999999999999999999999876 57899999998775432         


Q ss_pred             cchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC
Q 022103          183 LEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ  262 (302)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~  262 (302)
                                                       +++..|+.+|++++.+++.++.++.++||+++.++||.++|++....
T Consensus       141 ---------------------------------~~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~~~~~  187 (238)
T PRK08264        141 ---------------------------------PNLGTYSASKAAAWSLTQALRAELAPQGTRVLGVHPGPIDTDMAAGL  187 (238)
T ss_pred             ---------------------------------CCchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeCCcccccccccC
Confidence                                             22367999999999999999999988999999999999999986543


Q ss_pred             --CCCCHHHHHHHHHHHhh
Q 022103          263 --GSHTADEAADVGARLLL  279 (302)
Q Consensus       263 --~~~~~~~~a~~~~~l~~  279 (302)
                        ...++++++..++..+.
T Consensus       188 ~~~~~~~~~~a~~~~~~~~  206 (238)
T PRK08264        188 DAPKASPADVARQILDALE  206 (238)
T ss_pred             CcCCCCHHHHHHHHHHHHh
Confidence              24788999999988876

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=99.95  E-value=6.5e-26  Score=195.38  Aligned_cols=225  Identities=23%  Similarity=0.241  Sum_probs=194.8

Q ss_pred             cccCcEEEEeCCC--chHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhh
Q 022103           27 WSKETIAIVTGAN--KGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSN  104 (302)
Q Consensus        27 ~~~~k~vlItGas--~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~  104 (302)
                      .++||++||+|-.  ..|++.+|+.|.++|+++.++..+. ++++.++++.+.-+...+++||+++.++++++|+++.++
T Consensus         3 ~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e-~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~~~   81 (259)
T COG0623           3 LLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGE-RLEKRVEELAEELGSDLVLPCDVTNDESIDALFATIKKK   81 (259)
T ss_pred             ccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccH-HHHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHHHHh
Confidence            5899999999985  8999999999999999999988887 777777777665556788999999999999999999999


Q ss_pred             CCCccEEEEcCCCCCC-----CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCccc
Q 022103          105 FAALDILVNNAGVSFN-----DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNI  179 (302)
Q Consensus       105 ~g~id~lv~~aG~~~~-----~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~  179 (302)
                      +|++|.|||+-|..+.     .+.+.+.|++...+++..++...+++++.|.|..   .+.||.++-..+...       
T Consensus        82 ~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~---ggSiltLtYlgs~r~-------  151 (259)
T COG0623          82 WGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNN---GGSILTLTYLGSERV-------  151 (259)
T ss_pred             hCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCC---CCcEEEEEeccceee-------
Confidence            9999999999998763     4777999999999999999999999999999986   488998876655422       


Q ss_pred             ccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCC
Q 022103          180 KSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMT  259 (302)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~  259 (302)
                                                         .|.+..++.+|+++|+-+|.||.+++++|||||+|+-|+|+|=-.
T Consensus       152 -----------------------------------vPnYNvMGvAKAaLEasvRyLA~dlG~~gIRVNaISAGPIrTLAa  196 (259)
T COG0623         152 -----------------------------------VPNYNVMGVAKAALEASVRYLAADLGKEGIRVNAISAGPIRTLAA  196 (259)
T ss_pred             -----------------------------------cCCCchhHHHHHHHHHHHHHHHHHhCccCeEEeeecccchHHHHh
Confidence                                               122456999999999999999999999999999999999998433


Q ss_pred             CCC-----------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          260 QGQ-----------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       260 ~~~-----------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                      ...                 +.+++|++++..++|++ +-...++|.++-+|.++.
T Consensus       197 sgI~~f~~~l~~~e~~aPl~r~vt~eeVG~tA~fLlS-dLssgiTGei~yVD~G~~  251 (259)
T COG0623         197 SGIGDFRKMLKENEANAPLRRNVTIEEVGNTAAFLLS-DLSSGITGEIIYVDSGYH  251 (259)
T ss_pred             hccccHHHHHHHHHhhCCccCCCCHHHhhhhHHHHhc-chhcccccceEEEcCCce
Confidence            222                 23789999999999998 788899999998888764

>PRK08017 oxidoreductase; Provisional

Probab=99.95  E-value=1.3e-25  Score=200.85  Aligned_cols=201  Identities=27%  Similarity=0.293  Sum_probs=170.8

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhh-CCCcc
Q 022103           31 TIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSN-FAALD  109 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~-~g~id  109 (302)
                      |+++||||+|+||+++++.|+++|++|++++|+.++++...    +.  .+..+.+|++|.+++..+++++... .+.+|
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~----~~--~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~   76 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMN----SL--GFTGILLDLDDPESVERAADEVIALTDNRLY   76 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHH----hC--CCeEEEeecCCHHHHHHHHHHHHHhcCCCCe
Confidence            68999999999999999999999999999999987765432    22  3678899999999999999988764 36899


Q ss_pred             EEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhh
Q 022103          110 ILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEEL  188 (302)
Q Consensus       110 ~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  188 (302)
                      .++||+|.... ++.+.+.+++++.+++|+.|++.+++.+++.|.+. +.++||++||..+..+..              
T Consensus        77 ~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-~~~~iv~~ss~~~~~~~~--------------  141 (256)
T PRK08017         77 GLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPH-GEGRIVMTSSVMGLISTP--------------  141 (256)
T ss_pred             EEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhc-CCCEEEEEcCcccccCCC--------------
Confidence            99999997543 56678999999999999999999999999999876 568999999987764422              


Q ss_pred             cHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC------
Q 022103          189 SEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ------  262 (302)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~------  262 (302)
                                                  ....|+++|++++.++++++.++.++||+|+.|+||.+.|++....      
T Consensus       142 ----------------------------~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~  193 (256)
T PRK08017        142 ----------------------------GRGAYAASKYALEAWSDALRMELRHSGIKVSLIEPGPIRTRFTDNVNQTQSD  193 (256)
T ss_pred             ----------------------------CccHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEeCCCcccchhhcccchhhc
Confidence                                        2367999999999999999999988999999999999999875431      


Q ss_pred             -----------CCCCHHHHHHHHHHHhhc
Q 022103          263 -----------GSHTADEAADVGARLLLL  280 (302)
Q Consensus       263 -----------~~~~~~~~a~~~~~l~~~  280 (302)
                                 ....+++++..+..++..
T Consensus       194 ~~~~~~~~~~~~~~~~~d~a~~~~~~~~~  222 (256)
T PRK08017        194 KPVENPGIAARFTLGPEAVVPKLRHALES  222 (256)
T ss_pred             cchhhhHHHhhcCCCHHHHHHHHHHHHhC
Confidence                       126799999999999863

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.95  E-value=1.1e-25  Score=201.81  Aligned_cols=198  Identities=18%  Similarity=0.172  Sum_probs=150.6

Q ss_pred             cccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhh
Q 022103           25 KWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSN  104 (302)
Q Consensus        25 ~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~  104 (302)
                      ...+++|+++||||++|||+++|++|+++|++|++++|+..+...   ... .+ ....+.+|+++.+++.+       .
T Consensus         9 ~~~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~---~~~-~~-~~~~~~~D~~~~~~~~~-------~   76 (245)
T PRK12367          9 QSTWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSE---SND-ES-PNEWIKWECGKEESLDK-------Q   76 (245)
T ss_pred             HHhhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhh---hhc-cC-CCeEEEeeCCCHHHHHH-------h
Confidence            455788999999999999999999999999999999998632211   111 11 23578899999988764       3


Q ss_pred             CCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCC--CCCcEEEecCCCcccccccCcccccc
Q 022103          105 FAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSP--SKSRILNISSRLGTLSKVRNPNIKSI  182 (302)
Q Consensus       105 ~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~--~~~~iv~vsS~~~~~~~~~~~~~~~~  182 (302)
                      ++++|++|||||....  .+.+.++|++++++|+.++++++++++|.|.+++  ..+.+++.+|.++..+          
T Consensus        77 ~~~iDilVnnAG~~~~--~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~~----------  144 (245)
T PRK12367         77 LASLDVLILNHGINPG--GRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQP----------  144 (245)
T ss_pred             cCCCCEEEECCccCCc--CCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccCC----------
Confidence            4689999999997532  3468899999999999999999999999997631  1233444455444321          


Q ss_pred             cchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHH---HHHHHHccCCCcEEEEeecCcccCCCC
Q 022103          183 LEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYT---MVLAKRYEGEGISVNSYCPGFTQTSMT  259 (302)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~---~~la~e~~~~gI~V~~v~PG~v~T~~~  259 (302)
                                                       +....|++||+|++.+.   +.++.|+.+.||+|+.++||+++|++.
T Consensus       145 ---------------------------------~~~~~Y~aSKaal~~~~~l~~~l~~e~~~~~i~v~~~~pg~~~t~~~  191 (245)
T PRK12367        145 ---------------------------------ALSPSYEISKRLIGQLVSLKKNLLDKNERKKLIIRKLILGPFRSELN  191 (245)
T ss_pred             ---------------------------------CCCchhHHHHHHHHHHHHHHHHHHHhhcccccEEEEecCCCcccccC
Confidence                                             12367999999986544   445555577899999999999999985


Q ss_pred             CCCCCCCHHHHHHHHHHHhhc
Q 022103          260 QGQGSHTADEAADVGARLLLL  280 (302)
Q Consensus       260 ~~~~~~~~~~~a~~~~~l~~~  280 (302)
                      .. ...+|+++|+.+.+.+..
T Consensus       192 ~~-~~~~~~~vA~~i~~~~~~  211 (245)
T PRK12367        192 PI-GIMSADFVAKQILDQANL  211 (245)
T ss_pred             cc-CCCCHHHHHHHHHHHHhc
Confidence            42 346899999999999863

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.94  E-value=1.1e-25  Score=202.40  Aligned_cols=207  Identities=23%  Similarity=0.270  Sum_probs=185.8

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCC--CceeEEEeeCCCHHHHHHHHHHHHhhCCCc
Q 022103           31 TIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKG--LPVNFFQLDVSDPSSIEAFVSWFKSNFAAL  108 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~i  108 (302)
                      +.++|||+++|||+++|+.+..+|++|.++.|+.+++.++.++++-..  .++.++.+|+.|-+++..++++++..++.+
T Consensus        34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~~  113 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGPI  113 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCCc
Confidence            699999999999999999999999999999999999999999887432  236788999999999999999999999999


Q ss_pred             cEEEEcCCCCCCC-CCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhh
Q 022103          109 DILVNNAGVSFND-IYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEE  187 (302)
Q Consensus       109 d~lv~~aG~~~~~-~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~  187 (302)
                      |.++||||..-++ +.+.+++.++..+++|++++++++++.++.|++....|+|++++|.++..+..             
T Consensus       114 d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~~i~-------------  180 (331)
T KOG1210|consen  114 DNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAMLGIY-------------  180 (331)
T ss_pred             ceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhcCcc-------------
Confidence            9999999987664 78899999999999999999999999999999986568999999999987743             


Q ss_pred             hcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC-----
Q 022103          188 LSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ-----  262 (302)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~-----  262 (302)
                                                   ++++|+++|+|+.+++..++.|+.++||+|..+.|+.+.||.+...     
T Consensus       181 -----------------------------GysaYs~sK~alrgLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE~En~tkP  231 (331)
T KOG1210|consen  181 -----------------------------GYSAYSPSKFALRGLAEALRQELIKYGVHVTLYYPPDTLTPGFERENKTKP  231 (331)
T ss_pred             -----------------------------cccccccHHHHHHHHHHHHHHHHhhcceEEEEEcCCCCCCCccccccccCc
Confidence                                         3689999999999999999999999999999999999999976542     


Q ss_pred             ----------CCCCHHHHHHHHHHHhh
Q 022103          263 ----------GSHTADEAADVGARLLL  279 (302)
Q Consensus       263 ----------~~~~~~~~a~~~~~l~~  279 (302)
                                +...+|++|..++.-+.
T Consensus       232 ~~t~ii~g~ss~~~~e~~a~~~~~~~~  258 (331)
T KOG1210|consen  232 EETKIIEGGSSVIKCEEMAKAIVKGMK  258 (331)
T ss_pred             hheeeecCCCCCcCHHHHHHHHHhHHh
Confidence                      22678999998877654

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.94  E-value=4.7e-25  Score=210.29  Aligned_cols=215  Identities=21%  Similarity=0.255  Sum_probs=167.4

Q ss_pred             CccccCCCCCcccccccccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeC
Q 022103            9 NYFSSSSSSSSLVSSTKWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDV   88 (302)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl   88 (302)
                      .|+++..+.-+...++..++++|+++||||+||||++++++|+++|++|++++|+.++++...   ......+..+.+|+
T Consensus       157 ~~~~~~~~~~d~~~~ta~sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~---~~~~~~v~~v~~Dv  233 (406)
T PRK07424        157 AYYCGTFTLVDKLMGTALSLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEI---NGEDLPVKTLHWQV  233 (406)
T ss_pred             ceeeeeEEEeehhcCcccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---hhcCCCeEEEEeeC
Confidence            566777777788888888899999999999999999999999999999999999876654332   22233567889999


Q ss_pred             CCHHHHHHHHHHHHhhCCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCC---CCcEEEec
Q 022103           89 SDPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPS---KSRILNIS  165 (302)
Q Consensus        89 t~~~~~~~~~~~~~~~~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~---~~~iv~vs  165 (302)
                      +|++++.+.+       +++|++|||||....  .+.+.+++++++++|+.|++.++++++|.|++++.   .+.+|++|
T Consensus       234 sd~~~v~~~l-------~~IDiLInnAGi~~~--~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~S  304 (406)
T PRK07424        234 GQEAALAELL-------EKVDILIINHGINVH--GERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTS  304 (406)
T ss_pred             CCHHHHHHHh-------CCCCEEEECCCcCCC--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEc
Confidence            9998876543       479999999997532  35788999999999999999999999999987632   23455555


Q ss_pred             CCCcccccccCcccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcE
Q 022103          166 SRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGIS  245 (302)
Q Consensus       166 S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~  245 (302)
                      + ++. .                                          |+....|++||+|+..++. ++++.  .++.
T Consensus       305 s-a~~-~------------------------------------------~~~~~~Y~ASKaAl~~l~~-l~~~~--~~~~  337 (406)
T PRK07424        305 E-AEV-N------------------------------------------PAFSPLYELSKRALGDLVT-LRRLD--APCV  337 (406)
T ss_pred             c-ccc-c------------------------------------------CCCchHHHHHHHHHHHHHH-HHHhC--CCCc
Confidence            4 322 1                                          1123569999999999985 44432  4677


Q ss_pred             EEEeecCcccCCCCCCCCCCCHHHHHHHHHHHhhcCCC
Q 022103          246 VNSYCPGFTQTSMTQGQGSHTADEAADVGARLLLLHPQ  283 (302)
Q Consensus       246 V~~v~PG~v~T~~~~~~~~~~~~~~a~~~~~l~~~~~~  283 (302)
                      |..+.||+++|+|.. .+..+||++|..+++.+..+..
T Consensus       338 I~~i~~gp~~t~~~~-~~~~spe~vA~~il~~i~~~~~  374 (406)
T PRK07424        338 VRKLILGPFKSNLNP-IGVMSADWVAKQILKLAKRDFR  374 (406)
T ss_pred             eEEEEeCCCcCCCCc-CCCCCHHHHHHHHHHHHHCCCC
Confidence            888899999999853 3457899999999999874433

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.93  E-value=6.7e-24  Score=186.11  Aligned_cols=197  Identities=31%  Similarity=0.431  Sum_probs=165.1

Q ss_pred             CcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCcc
Q 022103           30 ETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALD  109 (302)
Q Consensus        30 ~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id  109 (302)
                      .|+++||||+|+||+++++.|+++ ++|++++|+.++.++..+..    ..+.++.+|++|.++++++++++    +++|
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~----~~id   73 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAEL----PGATPFPVDLTDPEAIAAAVEQL----GRLD   73 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHh----ccceEEecCCCCHHHHHHHHHhc----CCCC
Confidence            478999999999999999999999 99999999987765554332    25788999999999998888754    5799


Q ss_pred             EEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhh
Q 022103          110 ILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEEL  188 (302)
Q Consensus       110 ~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  188 (302)
                      +|||++|.... .+.+.+.+++.+++++|+.+++.+++.+++.+.+.  .+++|++||..+..+.               
T Consensus        74 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~~~v~~ss~~~~~~~---------------  136 (227)
T PRK08219         74 VLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAA--HGHVVFINSGAGLRAN---------------  136 (227)
T ss_pred             EEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC--CCeEEEEcchHhcCcC---------------
Confidence            99999997643 45678899999999999999999999999998875  5899999998765332               


Q ss_pred             cHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCC-------
Q 022103          189 SEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG-------  261 (302)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~-------  261 (302)
                                                 +++..|+.+|++++.+++.++.++... |++++|+||.++|++...       
T Consensus       137 ---------------------------~~~~~y~~~K~a~~~~~~~~~~~~~~~-i~~~~i~pg~~~~~~~~~~~~~~~~  188 (227)
T PRK08219        137 ---------------------------PGWGSYAASKFALRALADALREEEPGN-VRVTSVHPGRTDTDMQRGLVAQEGG  188 (227)
T ss_pred             ---------------------------CCCchHHHHHHHHHHHHHHHHHHhcCC-ceEEEEecCCccchHhhhhhhhhcc
Confidence                                       123679999999999999999987655 999999999999886532       


Q ss_pred             ----CCCCCHHHHHHHHHHHhhc
Q 022103          262 ----QGSHTADEAADVGARLLLL  280 (302)
Q Consensus       262 ----~~~~~~~~~a~~~~~l~~~  280 (302)
                          ....++++++..+..++..
T Consensus       189 ~~~~~~~~~~~dva~~~~~~l~~  211 (227)
T PRK08219        189 EYDPERYLRPETVAKAVRFAVDA  211 (227)
T ss_pred             ccCCCCCCCHHHHHHHHHHHHcC
Confidence                1237899999999999864

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.93  E-value=7.8e-25  Score=195.33  Aligned_cols=213  Identities=30%  Similarity=0.257  Sum_probs=158.1

Q ss_pred             HHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCccEEEEcCCCCCCCCCCC
Q 022103           46 LVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKN  125 (302)
Q Consensus        46 la~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id~lv~~aG~~~~~~~~~  125 (302)
                      +|++|+++|++|++++|+.++.+           ...++.+|++|.++++++++++.   +++|+||||||...      
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~~~~-----------~~~~~~~Dl~~~~~v~~~~~~~~---~~iD~li~nAG~~~------   60 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREPGMT-----------LDGFIQADLGDPASIDAAVAALP---GRIDALFNIAGVPG------   60 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcchhh-----------hhHhhcccCCCHHHHHHHHHHhc---CCCeEEEECCCCCC------
Confidence            47899999999999999876532           12457899999999999998874   58999999999752      


Q ss_pred             CHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhhcHHHHHHHHHHHHhhhc
Q 022103          126 TVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVK  205 (302)
Q Consensus       126 ~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (302)
                       .+.++.++++|+.+++++++.++|.|.+   .++||++||..+.......+......+  ..+   ..+.    ...  
T Consensus        61 -~~~~~~~~~vN~~~~~~l~~~~~~~~~~---~g~Iv~isS~~~~~~~~~~~~~~~~~~--~~~---~~~~----~~~--  125 (241)
T PRK12428         61 -TAPVELVARVNFLGLRHLTEALLPRMAP---GGAIVNVASLAGAEWPQRLELHKALAA--TAS---FDEG----AAW--  125 (241)
T ss_pred             -CCCHHHhhhhchHHHHHHHHHHHHhccC---CcEEEEeCcHHhhccccchHHHHhhhc--cch---HHHH----HHh--
Confidence             1357899999999999999999999864   389999999987632111000000000  000   0000    000  


Q ss_pred             cCCCCCCCCCcccccchhhHHHHHHHHHHHH-HHccCCCcEEEEeecCcccCCCCCCC-----------------CCCCH
Q 022103          206 DGTWKSQGWPEIWTDYAVSKLALNAYTMVLA-KRYEGEGISVNSYCPGFTQTSMTQGQ-----------------GSHTA  267 (302)
Q Consensus       206 ~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la-~e~~~~gI~V~~v~PG~v~T~~~~~~-----------------~~~~~  267 (302)
                         ++. ...+++.+|++||+|+++++++++ .+++++||+||+|+||.++|+|....                 ...+|
T Consensus       126 ---~~~-~~~~~~~~Y~~sK~a~~~~~~~la~~e~~~~girvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~p  201 (241)
T PRK12428        126 ---LAA-HPVALATGYQLSKEALILWTMRQAQPWFGARGIRVNCVAPGPVFTPILGDFRSMLGQERVDSDAKRMGRPATA  201 (241)
T ss_pred             ---hhc-cCCCcccHHHHHHHHHHHHHHHHHHHhhhccCeEEEEeecCCccCcccccchhhhhhHhhhhcccccCCCCCH
Confidence               001 113345789999999999999999 99988999999999999999986431                 12579


Q ss_pred             HHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          268 DEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       268 ~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                      +++|..+++++. +....++|+.+..++...
T Consensus       202 e~va~~~~~l~s-~~~~~~~G~~i~vdgg~~  231 (241)
T PRK12428        202 DEQAAVLVFLCS-DAARWINGVNLPVDGGLA  231 (241)
T ss_pred             HHHHHHHHHHcC-hhhcCccCcEEEecCchH
Confidence            999999999986 566789999999888743

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.92  E-value=4.1e-25  Score=190.25  Aligned_cols=224  Identities=21%  Similarity=0.229  Sum_probs=178.8

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      ..+|++|+||++.|||..+++.+.+++-..+..++.....+ .....-..+........|+++..-+.++++..+.+++.
T Consensus         4 ~~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~-~~~L~v~~gd~~v~~~g~~~e~~~l~al~e~~r~k~gk   82 (253)
T KOG1204|consen    4 NMRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAE-LEGLKVAYGDDFVHVVGDITEEQLLGALREAPRKKGGK   82 (253)
T ss_pred             ccceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhccccc-ccceEEEecCCcceechHHHHHHHHHHHHhhhhhcCCc
Confidence            34789999999999999999998888755444444332222 11111122333445568888888899999999999999


Q ss_pred             ccEEEEcCCCCCC--C--CCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCccccccc
Q 022103          108 LDILVNNAGVSFN--D--IYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSIL  183 (302)
Q Consensus       108 id~lv~~aG~~~~--~--~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~  183 (302)
                      .|++|||||...+  .  ....|.+.|++.+++|+++.+.+.+.++|.+++.+-.+.+|+|||.+...+.          
T Consensus        83 r~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav~p~----------  152 (253)
T KOG1204|consen   83 RDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAVRPF----------  152 (253)
T ss_pred             eeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhhccc----------
Confidence            9999999998765  2  3467899999999999999999999999999988556999999999987664          


Q ss_pred             chhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCCC
Q 022103          184 EDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQG  263 (302)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~~  263 (302)
                                                      ..|++|+++|+|.++|++.||.|-. ++|+|..+.||.++|+|....+
T Consensus       153 --------------------------------~~wa~yc~~KaAr~m~f~~lA~EEp-~~v~vl~~aPGvvDT~mq~~ir  199 (253)
T KOG1204|consen  153 --------------------------------SSWAAYCSSKAARNMYFMVLASEEP-FDVRVLNYAPGVVDTQMQVCIR  199 (253)
T ss_pred             --------------------------------cHHHHhhhhHHHHHHHHHHHhhcCc-cceeEEEccCCcccchhHHHHh
Confidence                                            3468999999999999999999833 7999999999999999955432


Q ss_pred             ---------------------CCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          264 ---------------------SHTADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       264 ---------------------~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                                           ..+|...+..+..|+.. .. ..+|.++.+.+++
T Consensus       200 ~~~~~~p~~l~~f~el~~~~~ll~~~~~a~~l~~L~e~-~~-f~sG~~vdy~D~~  252 (253)
T KOG1204|consen  200 ETSRMTPADLKMFKELKESGQLLDPQVTAKVLAKLLEK-GD-FVSGQHVDYYDEF  252 (253)
T ss_pred             hccCCCHHHHHHHHHHHhcCCcCChhhHHHHHHHHHHh-cC-ccccccccccccc
Confidence                                 17788899999999873 22 6899999988876

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.90  E-value=2.9e-22  Score=223.01  Aligned_cols=183  Identities=23%  Similarity=0.254  Sum_probs=156.8

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHc-CCEEEEEecCh------------------------------------------
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAEL-GLTVILTARDV------------------------------------------   64 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~-G~~V~l~~r~~------------------------------------------   64 (302)
                      -+++++|||||++|||+++|++|+++ |++|++++|+.                                          
T Consensus      1995 ~~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~ 2074 (2582)
T TIGR02813      1995 NSDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVR 2074 (2582)
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhccc
Confidence            35899999999999999999999998 69999999982                                          


Q ss_pred             -----hhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhh
Q 022103           65 -----ERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNF  138 (302)
Q Consensus        65 -----~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~  138 (302)
                           .+.....+++.+.|.++.++.+|++|.++++++++++.+. ++||+||||||+... .+.+.+.++|++++++|+
T Consensus      2075 ~~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~-g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv 2153 (2582)
T TIGR02813      2075 PVLSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKT-LQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKV 2153 (2582)
T ss_pred             ccchhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHh-CCCcEEEECCccCCCCCcccCCHHHHHHHHHHHH
Confidence                 1122334445556778899999999999999999999887 689999999998654 578899999999999999


Q ss_pred             hHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCccc
Q 022103          139 YGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIW  218 (302)
Q Consensus       139 ~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (302)
                      .|.+++++++.+.+     .++||++||..+.+++..                                          +
T Consensus      2154 ~G~~~Ll~al~~~~-----~~~IV~~SSvag~~G~~g------------------------------------------q 2186 (2582)
T TIGR02813      2154 DGLLSLLAALNAEN-----IKLLALFSSAAGFYGNTG------------------------------------------Q 2186 (2582)
T ss_pred             HHHHHHHHHHHHhC-----CCeEEEEechhhcCCCCC------------------------------------------c
Confidence            99999999987643     357999999999877543                                          3


Q ss_pred             ccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCC
Q 022103          219 TDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ  260 (302)
Q Consensus       219 ~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~  260 (302)
                      ..|+++|.+++.+++.++.++.  +++|++|+||+++|+|..
T Consensus      2187 s~YaaAkaaL~~la~~la~~~~--~irV~sI~wG~wdtgm~~ 2226 (2582)
T TIGR02813      2187 SDYAMSNDILNKAALQLKALNP--SAKVMSFNWGPWDGGMVN 2226 (2582)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcC--CcEEEEEECCeecCCccc
Confidence            6799999999999999999864  599999999999999864

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.89  E-value=1e-21  Score=164.10  Aligned_cols=174  Identities=24%  Similarity=0.242  Sum_probs=144.8

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHH---HHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           31 TIAIVTGANKGIGFALVKRLAELGL-TVILTARDVERGQRA---VESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~~~~~~~~---~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      |+++||||++|||+++++.|+++|+ .|++++|+.+..+..   .+++++.+.++.++.+|+++++++.++++++...++
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARLG   80 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            5799999999999999999999997 688888876543322   345555566788999999999999999999998889


Q ss_pred             CccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccch
Q 022103          107 ALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILED  185 (302)
Q Consensus       107 ~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~  185 (302)
                      ++|.+||++|.... .+.+.+.++++.++++|+.+++++++.+.+    . ..++++++||..+..+..           
T Consensus        81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~----~-~~~~ii~~ss~~~~~~~~-----------  144 (180)
T smart00822       81 PLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRD----L-PLDFFVLFSSVAGVLGNP-----------  144 (180)
T ss_pred             CeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhcc----C-CcceEEEEccHHHhcCCC-----------
Confidence            99999999997654 467788999999999999999999999843    2 468999999987765432           


Q ss_pred             hhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCccc
Q 022103          186 EELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQ  255 (302)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~  255 (302)
                                                     .+..|+++|.+++.+++.++.    .|+++..+.||++.
T Consensus       145 -------------------------------~~~~y~~sk~~~~~~~~~~~~----~~~~~~~~~~g~~~  179 (180)
T smart00822      145 -------------------------------GQANYAAANAFLDALAAHRRA----RGLPATSINWGAWA  179 (180)
T ss_pred             -------------------------------CchhhHHHHHHHHHHHHHHHh----cCCceEEEeecccc
Confidence                                           236799999999999987764    57889999999875

It uses NADPH to reduce the keto group to a hydroxy group.

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=99.88  E-value=6.6e-21  Score=174.44  Aligned_cols=228  Identities=21%  Similarity=0.180  Sum_probs=187.6

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHH--HHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQR--AVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~--~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      .+++|+||||+|.||.+++++|+++||+|..+.|++++.+.  ....++....++..+.+|++|++++...++       
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~-------   77 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAID-------   77 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHh-------
Confidence            67899999999999999999999999999999999987554  466666555679999999999999999998       


Q ss_pred             CccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchh
Q 022103          107 ALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDE  186 (302)
Q Consensus       107 ~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~  186 (302)
                      .+|+|+|.|........+    .-.+.+++.+.|+.++++++...    +...|||++||.++...+..+.+...+.+++
T Consensus        78 gcdgVfH~Asp~~~~~~~----~e~~li~pav~Gt~nVL~ac~~~----~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~  149 (327)
T KOG1502|consen   78 GCDGVFHTASPVDFDLED----PEKELIDPAVKGTKNVLEACKKT----KSVKRVVYTSSTAAVRYNGPNIGENSVVDEE  149 (327)
T ss_pred             CCCEEEEeCccCCCCCCC----cHHhhhhHHHHHHHHHHHHHhcc----CCcceEEEeccHHHhccCCcCCCCCcccccc
Confidence            589999999986543211    22378999999999999998664    2479999999999998876666778899999


Q ss_pred             hhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC----
Q 022103          187 ELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ----  262 (302)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~----  262 (302)
                      .|+..++++=..                    ..|..||.-.|..++.++.|   .|+...+|+|++|-.|...+.    
T Consensus       150 ~wsd~~~~~~~~--------------------~~Y~~sK~lAEkaAw~fa~e---~~~~lv~inP~lV~GP~l~~~l~~s  206 (327)
T KOG1502|consen  150 SWSDLDFCRCKK--------------------LWYALSKTLAEKAAWEFAKE---NGLDLVTINPGLVFGPGLQPSLNSS  206 (327)
T ss_pred             cCCcHHHHHhhH--------------------HHHHHHHHHHHHHHHHHHHh---CCccEEEecCCceECCCcccccchh
Confidence            999988876433                    24999999999999999998   689999999999998887662    


Q ss_pred             --------------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          263 --------------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       263 --------------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                                          ..+..+++|.+-+.++..+.   ..|+|+....-.
T Consensus       207 ~~~~l~~i~G~~~~~~n~~~~~VdVrDVA~AHv~a~E~~~---a~GRyic~~~~~  258 (327)
T KOG1502|consen  207 LNALLKLIKGLAETYPNFWLAFVDVRDVALAHVLALEKPS---AKGRYICVGEVV  258 (327)
T ss_pred             HHHHHHHHhcccccCCCCceeeEeHHHHHHHHHHHHcCcc---cCceEEEecCcc
Confidence                                11667999999888887443   348888776543

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.87  E-value=9.9e-21  Score=176.32  Aligned_cols=203  Identities=18%  Similarity=0.187  Sum_probs=153.8

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcC--CEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELG--LTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G--~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      +++|+++||||+|+||+++++.|+++|  ++|++++|+..+.....+.+.  ..++.++.+|++|.+++.++++      
T Consensus         2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~l~~~~~------   73 (324)
T TIGR03589         2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFP--APCLRFFIGDVRDKERLTRALR------   73 (324)
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhC--CCcEEEEEccCCCHHHHHHHHh------
Confidence            468999999999999999999999986  789999998765544433332  2468899999999999888765      


Q ss_pred             CCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccch
Q 022103          106 AALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILED  185 (302)
Q Consensus       106 g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~  185 (302)
                       .+|+|||+||....+..+.+   .++.+++|+.+++++++++.+.     +.++||++||.....+             
T Consensus        74 -~iD~Vih~Ag~~~~~~~~~~---~~~~~~~Nv~g~~~ll~aa~~~-----~~~~iV~~SS~~~~~p-------------  131 (324)
T TIGR03589        74 -GVDYVVHAAALKQVPAAEYN---PFECIRTNINGAQNVIDAAIDN-----GVKRVVALSTDKAANP-------------  131 (324)
T ss_pred             -cCCEEEECcccCCCchhhcC---HHHHHHHHHHHHHHHHHHHHHc-----CCCEEEEEeCCCCCCC-------------
Confidence             58999999997543322223   3568999999999999998763     3579999999643211             


Q ss_pred             hhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCC-----
Q 022103          186 EELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ-----  260 (302)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~-----  260 (302)
                                                      ...|++||++.+.+++.++.++...|++++++.||.+..+-..     
T Consensus       132 --------------------------------~~~Y~~sK~~~E~l~~~~~~~~~~~gi~~~~lR~g~v~G~~~~~i~~~  179 (324)
T TIGR03589       132 --------------------------------INLYGATKLASDKLFVAANNISGSKGTRFSVVRYGNVVGSRGSVVPFF  179 (324)
T ss_pred             --------------------------------CCHHHHHHHHHHHHHHHHHhhccccCcEEEEEeecceeCCCCCcHHHH
Confidence                                            2569999999999999998887788999999999999864210     


Q ss_pred             ------C---C---------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCc
Q 022103          261 ------G---Q---------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDP  296 (302)
Q Consensus       261 ------~---~---------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  296 (302)
                            .   .         .....++++..++..+.. .   ..|.+|+..++
T Consensus       180 ~~~~~~~~~~~~i~~~~~~r~~i~v~D~a~a~~~al~~-~---~~~~~~~~~~~  229 (324)
T TIGR03589       180 KSLKEEGVTELPITDPRMTRFWITLEQGVNFVLKSLER-M---LGGEIFVPKIP  229 (324)
T ss_pred             HHHHHhCCCCeeeCCCCceEeeEEHHHHHHHHHHHHhh-C---CCCCEEccCCC
Confidence                  0   0         125688999998888752 2   13556654443

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.85  E-value=1.2e-19  Score=177.86  Aligned_cols=191  Identities=17%  Similarity=0.228  Sum_probs=149.5

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhh-----CC----CceeEEEeeCCCHHHHHHHH
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSE-----KG----LPVNFFQLDVSDPSSIEAFV   98 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~-----~~----~~~~~~~~Dlt~~~~~~~~~   98 (302)
                      ..||+++||||+|+||++++++|+++|++|++++|+.++++...+++.+     .+    .++.++.+|++|.+++.+.+
T Consensus        78 ~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~aL  157 (576)
T PLN03209         78 KDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPAL  157 (576)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHHh
Confidence            5689999999999999999999999999999999999888777665543     11    25789999999999876543


Q ss_pred             HHHHhhCCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcc-cccccCc
Q 022103           99 SWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGT-LSKVRNP  177 (302)
Q Consensus        99 ~~~~~~~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~-~~~~~~~  177 (302)
                             +.+|+||||+|....     ...++...+.+|+.+..++++++...     +.++||++||..+. .+.    
T Consensus       158 -------ggiDiVVn~AG~~~~-----~v~d~~~~~~VN~~Gt~nLl~Aa~~a-----gVgRIV~VSSiga~~~g~----  216 (576)
T PLN03209        158 -------GNASVVICCIGASEK-----EVFDVTGPYRIDYLATKNLVDAATVA-----KVNHFILVTSLGTNKVGF----  216 (576)
T ss_pred             -------cCCCEEEEccccccc-----cccchhhHHHHHHHHHHHHHHHHHHh-----CCCEEEEEccchhcccCc----
Confidence                   579999999997532     12246778999999999999998653     46899999998753 111    


Q ss_pred             ccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCC
Q 022103          178 NIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTS  257 (302)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~  257 (302)
                                                           +.  ..|. +|.++..+.+.+..++...||+++.|+||++.|+
T Consensus       217 -------------------------------------p~--~~~~-sk~~~~~~KraaE~~L~~sGIrvTIVRPG~L~tp  256 (576)
T PLN03209        217 -------------------------------------PA--AILN-LFWGVLCWKRKAEEALIASGLPYTIVRPGGMERP  256 (576)
T ss_pred             -------------------------------------cc--cchh-hHHHHHHHHHHHHHHHHHcCCCEEEEECCeecCC
Confidence                                                 00  1243 6777777888888888888999999999999887


Q ss_pred             CCCC---------------CCCCCHHHHHHHHHHHhh
Q 022103          258 MTQG---------------QGSHTADEAADVGARLLL  279 (302)
Q Consensus       258 ~~~~---------------~~~~~~~~~a~~~~~l~~  279 (302)
                      +...               .+..+.+++|..+++++.
T Consensus       257 ~d~~~~t~~v~~~~~d~~~gr~isreDVA~vVvfLas  293 (576)
T PLN03209        257 TDAYKETHNLTLSEEDTLFGGQVSNLQVAELMACMAK  293 (576)
T ss_pred             ccccccccceeeccccccCCCccCHHHHHHHHHHHHc
Confidence            6431               122678999999999987

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=99.85  E-value=1.7e-20  Score=163.94  Aligned_cols=200  Identities=28%  Similarity=0.373  Sum_probs=165.9

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcC-----CEEEEEecChhhHHHHHHHHhhCCC----ceeEEEeeCCCHHHHHHHHH
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELG-----LTVILTARDVERGQRAVESLSEKGL----PVNFFQLDVSDPSSIEAFVS   99 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G-----~~V~l~~r~~~~~~~~~~~l~~~~~----~~~~~~~Dlt~~~~~~~~~~   99 (302)
                      -.|+++|||+++|||.++|++|.+..     ..+++.+|+-++.+++.+++.+.-.    ++..+.+|+++++++.++..
T Consensus         2 ~RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~   81 (341)
T KOG1478|consen    2 MRKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASK   81 (341)
T ss_pred             CceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHH
Confidence            35899999999999999999999874     3578899999999999999987643    56789999999999999999


Q ss_pred             HHHhhCCCccEEEEcCCCCCCC---------------C-------------CCCCHHHHHHHHHhhhhHHHHHHHHHhhh
Q 022103          100 WFKSNFAALDILVNNAGVSFND---------------I-------------YKNTVEHAETVIRTNFYGAKLLTESLLPL  151 (302)
Q Consensus       100 ~~~~~~g~id~lv~~aG~~~~~---------------~-------------~~~~~e~~~~~~~vn~~~~~~l~~~~~~~  151 (302)
                      ++.+.|.++|.++.|||++..+               +             -..+.++...+++.|+.|++.+.+.+.|.
T Consensus        82 di~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~pl  161 (341)
T KOG1478|consen   82 DIKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEPL  161 (341)
T ss_pred             HHHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhhH
Confidence            9999999999999999975321               0             12355778899999999999999999999


Q ss_pred             hhcCCCCCcEEEecCCCcccccccCcccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHH
Q 022103          152 FRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAY  231 (302)
Q Consensus       152 l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~  231 (302)
                      +.++ +...+|.+||..+.-.+              +.+++..++.+.                   .+|+.||.+++.+
T Consensus       162 l~~~-~~~~lvwtSS~~a~kk~--------------lsleD~q~~kg~-------------------~pY~sSKrl~DlL  207 (341)
T KOG1478|consen  162 LCHS-DNPQLVWTSSRMARKKN--------------LSLEDFQHSKGK-------------------EPYSSSKRLTDLL  207 (341)
T ss_pred             hhcC-CCCeEEEEeeccccccc--------------CCHHHHhhhcCC-------------------CCcchhHHHHHHH
Confidence            9987 34499999998775322              333333333222                   5699999999999


Q ss_pred             HHHHHHHccCCCcEEEEeecCcccCCCCCCC
Q 022103          232 TMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ  262 (302)
Q Consensus       232 ~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~  262 (302)
                      .-++-+.+.+.|+.-..++||...|++....
T Consensus       208 h~A~~~~~~~~g~~qyvv~pg~~tt~~~~~~  238 (341)
T KOG1478|consen  208 HVALNRNFKPLGINQYVVQPGIFTTNSFSEY  238 (341)
T ss_pred             HHHHhccccccchhhhcccCceeecchhhhh
Confidence            9999999999999999999999999996643

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.85  E-value=4.9e-20  Score=157.87  Aligned_cols=172  Identities=26%  Similarity=0.331  Sum_probs=137.3

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCC-EEEEEecCh---hhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           32 IAIVTGANKGIGFALVKRLAELGL-TVILTARDV---ERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        32 ~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~~---~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      ++|||||.||||..+++.|+++|. +|++++|+.   .+..+..+++.+.+.++.++.+|++|+++++++++.+.+.+++
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~   81 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFGP   81 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS-
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccCC
Confidence            799999999999999999999975 799999993   3556788888888899999999999999999999999999999


Q ss_pred             ccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchh
Q 022103          108 LDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDE  186 (302)
Q Consensus       108 id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~  186 (302)
                      |+.|||+||.... .+.+.+.+.++.++...+.+.++|.+.+.+.     ....+|++||+.+.++.+.+          
T Consensus        82 i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~-----~l~~~i~~SSis~~~G~~gq----------  146 (181)
T PF08659_consen   82 IDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENR-----PLDFFILFSSISSLLGGPGQ----------  146 (181)
T ss_dssp             EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTT-----TTSEEEEEEEHHHHTT-TTB----------
T ss_pred             cceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcC-----CCCeEEEECChhHhccCcch----------
Confidence            9999999998755 5788999999999999999999999988762     46789999999998887654          


Q ss_pred             hhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcc
Q 022103          187 ELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFT  254 (302)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v  254 (302)
                                                      +.|+++.+.++.|++....    .|..+.+|+-|..
T Consensus       147 --------------------------------~~YaaAN~~lda~a~~~~~----~g~~~~sI~wg~W  178 (181)
T PF08659_consen  147 --------------------------------SAYAAANAFLDALARQRRS----RGLPAVSINWGAW  178 (181)
T ss_dssp             --------------------------------HHHHHHHHHHHHHHHHHHH----TTSEEEEEEE-EB
T ss_pred             --------------------------------HhHHHHHHHHHHHHHHHHh----CCCCEEEEEcccc
Confidence                                            7799999999999997765    4677888877654

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>PLN02583 cinnamoyl-CoA reductase

Probab=99.85  E-value=2.3e-19  Score=165.09  Aligned_cols=228  Identities=16%  Similarity=0.105  Sum_probs=157.3

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChh--hHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHh
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVE--RGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKS  103 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~--~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~  103 (302)
                      ++-++|+++||||+|+||++++++|+++|++|+++.|+.+  +.+.....+...+.++.++.+|++|.+++..++.    
T Consensus         2 ~~~~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~----   77 (297)
T PLN02583          2 FDESSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALK----   77 (297)
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHc----
Confidence            3456789999999999999999999999999999999643  2233333333234468889999999998876654    


Q ss_pred             hCCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCccccccc
Q 022103          104 NFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSIL  183 (302)
Q Consensus       104 ~~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~  183 (302)
                         .+|.++|.++....    .+ ..++.++++|+.+++++++++.+.+    ..++||++||..+..............
T Consensus        78 ---~~d~v~~~~~~~~~----~~-~~~~~~~~~nv~gt~~ll~aa~~~~----~v~riV~~SS~~a~~~~~~~~~~~~~~  145 (297)
T PLN02583         78 ---GCSGLFCCFDPPSD----YP-SYDEKMVDVEVRAAHNVLEACAQTD----TIEKVVFTSSLTAVIWRDDNISTQKDV  145 (297)
T ss_pred             ---CCCEEEEeCccCCc----cc-ccHHHHHHHHHHHHHHHHHHHHhcC----CccEEEEecchHheecccccCCCCCCC
Confidence               57889887754321    11 2467899999999999999997753    247999999987754221100000112


Q ss_pred             chhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC-
Q 022103          184 EDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ-  262 (302)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~-  262 (302)
                      +++.|+...+..                    .....|+.||...|.+++.++++   .|+++++|+|+.|.++..... 
T Consensus       146 ~E~~~~~~~~~~--------------------~~~~~Y~~sK~~aE~~~~~~~~~---~gi~~v~lrp~~v~Gp~~~~~~  202 (297)
T PLN02583        146 DERSWSDQNFCR--------------------KFKLWHALAKTLSEKTAWALAMD---RGVNMVSINAGLLMGPSLTQHN  202 (297)
T ss_pred             CcccCCCHHHHh--------------------hcccHHHHHHHHHHHHHHHHHHH---hCCcEEEEcCCcccCCCCCCch
Confidence            233332211100                    00135999999999999999876   589999999999988764321 


Q ss_pred             ---------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCC
Q 022103          263 ---------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLD  295 (302)
Q Consensus       263 ---------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~  295 (302)
                                     ..+..+++|...+..+.. +.  ..|++++..+
T Consensus       203 ~~~~~~~~~~~~~~~~~v~V~Dva~a~~~al~~-~~--~~~r~~~~~~  247 (297)
T PLN02583        203 PYLKGAAQMYENGVLVTVDVNFLVDAHIRAFED-VS--SYGRYLCFNH  247 (297)
T ss_pred             hhhcCCcccCcccCcceEEHHHHHHHHHHHhcC-cc--cCCcEEEecC
Confidence                           125569999998888863 32  3567666654

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.84  E-value=1.5e-19  Score=169.83  Aligned_cols=188  Identities=18%  Similarity=0.133  Sum_probs=140.9

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      +++|+++||||+|+||.++++.|+++|++|++++|+..........+.. +.++.++.+|+++.+++.+++++.     .
T Consensus         2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~-----~   75 (349)
T TIGR02622         2 WQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNL-AKKIEDHFGDIRDAAKLRKAIAEF-----K   75 (349)
T ss_pred             cCCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhh-cCCceEEEccCCCHHHHHHHHhhc-----C
Confidence            4678999999999999999999999999999999987654444333322 235778999999999999988864     6


Q ss_pred             ccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhh
Q 022103          108 LDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEE  187 (302)
Q Consensus       108 id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~  187 (302)
                      +|+|||+||....   ..+.+++...+++|+.+++++++++...   . ..++||++||...+... ...          
T Consensus        76 ~d~vih~A~~~~~---~~~~~~~~~~~~~N~~g~~~ll~a~~~~---~-~~~~iv~~SS~~vyg~~-~~~----------  137 (349)
T TIGR02622        76 PEIVFHLAAQPLV---RKSYADPLETFETNVMGTVNLLEAIRAI---G-SVKAVVNVTSDKCYRND-EWV----------  137 (349)
T ss_pred             CCEEEECCccccc---ccchhCHHHHHHHhHHHHHHHHHHHHhc---C-CCCEEEEEechhhhCCC-CCC----------
Confidence            8999999996432   2355667788999999999999987532   1 25789999997654211 000          


Q ss_pred             hcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccC----CCcEEEEeecCcccCCC
Q 022103          188 LSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEG----EGISVNSYCPGFTQTSM  258 (302)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~----~gI~V~~v~PG~v~T~~  258 (302)
                                         .+..+.....+..+|+.||.+.+.+++.++.++.+    .|++++.+.|+.+..+-
T Consensus       138 -------------------~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~  193 (349)
T TIGR02622       138 -------------------WGYRETDPLGGHDPYSSSKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGG  193 (349)
T ss_pred             -------------------CCCccCCCCCCCCcchhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCC
Confidence                               00000111223468999999999999999988754    48999999999998763

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.83  E-value=1.1e-18  Score=161.83  Aligned_cols=213  Identities=19%  Similarity=0.155  Sum_probs=151.6

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhC--CCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEK--GLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      ++|+++||||+|+||++++++|+++|++|++++|+.+..+.........  ..++.++.+|+++.+++.++++       
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   76 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAID-------   76 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHc-------
Confidence            4789999999999999999999999999999999876554443322211  2467889999999999888776       


Q ss_pred             CccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchh
Q 022103          107 ALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDE  186 (302)
Q Consensus       107 ~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~  186 (302)
                      .+|+|||+||....   ..+.+.+...+++|+.+++++++++.+.+    ..++||++||..+..+...........+++
T Consensus        77 ~~d~vih~A~~~~~---~~~~~~~~~~~~~n~~g~~~ll~a~~~~~----~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~  149 (325)
T PLN02989         77 GCETVFHTASPVAI---TVKTDPQVELINPAVNGTINVLRTCTKVS----SVKRVILTSSMAAVLAPETKLGPNDVVDET  149 (325)
T ss_pred             CCCEEEEeCCCCCC---CCCCChHHHHHHHHHHHHHHHHHHHHHcC----CceEEEEecchhheecCCccCCCCCccCcC
Confidence            58999999996432   23445678899999999999999997753    247999999987754422100000011111


Q ss_pred             h-hcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC---
Q 022103          187 E-LSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ---  262 (302)
Q Consensus       187 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~---  262 (302)
                      . ..+..                     .......|+.||.+.|.+++.++++   .|++++.+.|+.+..+.....   
T Consensus       150 ~~~~p~~---------------------~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~vyGp~~~~~~~~  205 (325)
T PLN02989        150 FFTNPSF---------------------AEERKQWYVLSKTLAEDAAWRFAKD---NEIDLIVLNPGLVTGPILQPTLNF  205 (325)
T ss_pred             CCCchhH---------------------hcccccchHHHHHHHHHHHHHHHHH---cCCeEEEEcCCceeCCCCCCCCCc
Confidence            1 00000                     0001256999999999999999876   589999999999988764321   


Q ss_pred             ----------C----------CCCHHHHHHHHHHHhh
Q 022103          263 ----------G----------SHTADEAADVGARLLL  279 (302)
Q Consensus       263 ----------~----------~~~~~~~a~~~~~l~~  279 (302)
                                +          ....+++|..++.++.
T Consensus       206 ~~~~i~~~~~~~~~~~~~~r~~i~v~Dva~a~~~~l~  242 (325)
T PLN02989        206 SVAVIVELMKGKNPFNTTHHRFVDVRDVALAHVKALE  242 (325)
T ss_pred             hHHHHHHHHcCCCCCCCcCcCeeEHHHHHHHHHHHhc
Confidence                      1          1335888888888775

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=99.82  E-value=1.2e-18  Score=163.25  Aligned_cols=188  Identities=13%  Similarity=0.133  Sum_probs=142.3

Q ss_pred             ccCcEEEEeCCCchHHHH--HHHHHHHcCCEEEEEecChhhH------------HHHHHHHhhCCCceeEEEeeCCCHHH
Q 022103           28 SKETIAIVTGANKGIGFA--LVKRLAELGLTVILTARDVERG------------QRAVESLSEKGLPVNFFQLDVSDPSS   93 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~a--la~~l~~~G~~V~l~~r~~~~~------------~~~~~~l~~~~~~~~~~~~Dlt~~~~   93 (302)
                      ..+|++||||+++|||.+  +|++| +.|++|+++++..++.            +...+.+.+.+..+..+.+|+++.++
T Consensus        39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~  117 (398)
T PRK13656         39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEI  117 (398)
T ss_pred             CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHH
Confidence            557999999999999999  89999 9999999988643221            23444555556677889999999999


Q ss_pred             HHHHHHHHHhhCCCccEEEEcCCCCCCC------------------C-----------------CCCCHHHHHHHHHhhh
Q 022103           94 IEAFVSWFKSNFAALDILVNNAGVSFND------------------I-----------------YKNTVEHAETVIRTNF  138 (302)
Q Consensus        94 ~~~~~~~~~~~~g~id~lv~~aG~~~~~------------------~-----------------~~~~~e~~~~~~~vn~  138 (302)
                      ++++++++.+.+|++|+||||+|...+.                  +                 ...+.++++.+++  +
T Consensus       118 v~~lie~I~e~~G~IDiLVnSaA~~~r~~p~~g~~~~s~lKpi~~~~~~~~~d~~~~~i~~~s~~~~~~~ei~~Tv~--v  195 (398)
T PRK13656        118 KQKVIELIKQDLGQVDLVVYSLASPRRTDPKTGEVYRSVLKPIGEPYTGKTLDTDKDVIIEVTVEPATEEEIADTVK--V  195 (398)
T ss_pred             HHHHHHHHHHhcCCCCEEEECCccCCCCCcccCceeecccccccccccCCcccccccceeEEEEeeCCHHHHHHHHH--h
Confidence            9999999999999999999999876321                  1                 1233444444433  3


Q ss_pred             hHH-----HHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCC
Q 022103          139 YGA-----KLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQG  213 (302)
Q Consensus       139 ~~~-----~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (302)
                      +|.     |.=.+...+.|.+   .+++|..|.......                                         
T Consensus       196 Mggedw~~Wi~al~~a~lla~---g~~~va~TY~G~~~t-----------------------------------------  231 (398)
T PRK13656        196 MGGEDWELWIDALDEAGVLAE---GAKTVAYSYIGPELT-----------------------------------------  231 (398)
T ss_pred             hccchHHHHHHHHHhcccccC---CcEEEEEecCCccee-----------------------------------------
Confidence            444     2224555566643   589999988766432                                         


Q ss_pred             CCccc-ccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC
Q 022103          214 WPEIW-TDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ  262 (302)
Q Consensus       214 ~~~~~-~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~  262 (302)
                      +|.++ ...+.+|+++|.-++.|+.++++.|||+|++.+|.+.|.-....
T Consensus       232 ~p~Y~~g~mG~AKa~LE~~~r~La~~L~~~giran~i~~g~~~T~Ass~I  281 (398)
T PRK13656        232 HPIYWDGTIGKAKKDLDRTALALNEKLAAKGGDAYVSVLKAVVTQASSAI  281 (398)
T ss_pred             ecccCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhcC
Confidence            23322 46799999999999999999999999999999999999876665

>PRK06720 hypothetical protein; Provisional

Probab=99.80  E-value=3.1e-18  Score=145.28  Aligned_cols=144  Identities=23%  Similarity=0.248  Sum_probs=120.1

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      +.+++|+++||||++|||+++|+.|+++|++|++++|+.+..+...+++.+.+.+..++.+|+++.++++++++++.+.+
T Consensus        12 ~~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~   91 (169)
T PRK06720         12 MKLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAF   91 (169)
T ss_pred             cccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            34789999999999999999999999999999999999888888778887666677889999999999999999999999


Q ss_pred             CCccEEEEcCCCCCC--CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCC------CCCcEEEecCCCcccc
Q 022103          106 AALDILVNNAGVSFN--DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSP------SKSRILNISSRLGTLS  172 (302)
Q Consensus       106 g~id~lv~~aG~~~~--~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~------~~~~iv~vsS~~~~~~  172 (302)
                      |++|++|||||....  .+.+.+.++ ++  .+|+.+.+..++.+.+.|.++.      +.||+..|||.+..+.
T Consensus        92 G~iDilVnnAG~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (169)
T PRK06720         92 SRIDMLFQNAGLYKIDSIFSRQQEND-SN--VLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFGIIGTKGQSFH  163 (169)
T ss_pred             CCCCEEEECCCcCCCCCcccccchhH-hh--ceeccHHHHHHHHHHHHHHhcCCEEEeecCceeeEeccccccce
Confidence            999999999998653  344445444 44  6777788889999888877653      4688889988776543

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.80  E-value=7.4e-18  Score=156.31  Aligned_cols=226  Identities=21%  Similarity=0.245  Sum_probs=154.7

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhC--CCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEK--GLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      -.|++++||||+|+||.+++++|+++|++|+++.|+..+.+.........  ..++.++.+|+++.+++.++++      
T Consensus         3 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   76 (322)
T PLN02986          3 GGGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIE------   76 (322)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHh------
Confidence            45789999999999999999999999999999999876544433322211  2468889999999998888776      


Q ss_pred             CCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCccc-ccccCcccccccc
Q 022103          106 AALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTL-SKVRNPNIKSILE  184 (302)
Q Consensus       106 g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~-~~~~~~~~~~~~~  184 (302)
                       .+|+|||+|+......    .+.....+++|+.++.++++++...    .+.++||++||..... +.... ......+
T Consensus        77 -~~d~vih~A~~~~~~~----~~~~~~~~~~nv~gt~~ll~~~~~~----~~v~rvV~~SS~~~~~~~~~~~-~~~~~~~  146 (322)
T PLN02986         77 -GCDAVFHTASPVFFTV----KDPQTELIDPALKGTINVLNTCKET----PSVKRVILTSSTAAVLFRQPPI-EANDVVD  146 (322)
T ss_pred             -CCCEEEEeCCCcCCCC----CCchhhhhHHHHHHHHHHHHHHHhc----CCccEEEEecchhheecCCccC-CCCCCcC
Confidence             5899999999743221    1223567899999999999987542    1357999999987642 21110 0001122


Q ss_pred             hhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC--
Q 022103          185 DEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ--  262 (302)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~--  262 (302)
                      ++.+......                    ......|+.||.+.+.+++.+.++   +|+++++++|+.+.++.....  
T Consensus       147 E~~~~~p~~~--------------------~~~~~~Y~~sK~~aE~~~~~~~~~---~~~~~~~lrp~~v~Gp~~~~~~~  203 (322)
T PLN02986        147 ETFFSDPSLC--------------------RETKNWYPLSKILAENAAWEFAKD---NGIDMVVLNPGFICGPLLQPTLN  203 (322)
T ss_pred             cccCCChHHh--------------------hccccchHHHHHHHHHHHHHHHHH---hCCeEEEEcccceeCCCCCCCCC
Confidence            2221100000                    001256999999999999999876   489999999999998753321  


Q ss_pred             ---------------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCc
Q 022103          263 ---------------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDP  296 (302)
Q Consensus       263 ---------------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  296 (302)
                                           ..+..+++|..++.++..+ .  ..|.|.+ .++
T Consensus       204 ~~~~~~~~~~~g~~~~~~~~~~~v~v~Dva~a~~~al~~~-~--~~~~yni-~~~  254 (322)
T PLN02986        204 FSVELIVDFINGKNLFNNRFYRFVDVRDVALAHIKALETP-S--ANGRYII-DGP  254 (322)
T ss_pred             ccHHHHHHHHcCCCCCCCcCcceeEHHHHHHHHHHHhcCc-c--cCCcEEE-ecC
Confidence                                 1256789999988887633 2  2455544 444

>PLN02650 dihydroflavonol-4-reductase

Probab=99.80  E-value=1.1e-17  Score=157.01  Aligned_cols=214  Identities=19%  Similarity=0.130  Sum_probs=149.9

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhC--CCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEK--GLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      ++.|++|||||+|+||.+++++|+++|++|++++|+.+........+...  ..++.++.+|+++.+.+.++++      
T Consensus         3 ~~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~------   76 (351)
T PLN02650          3 SQKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIR------   76 (351)
T ss_pred             CCCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHh------
Confidence            46689999999999999999999999999999999876655443332211  2357889999999998887776      


Q ss_pred             CCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccch
Q 022103          106 AALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILED  185 (302)
Q Consensus       106 g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~  185 (302)
                       .+|.|||+|+.....  .  .+..+..+++|+.++.++++++.+..    ..++||++||.....+....   ....++
T Consensus        77 -~~d~ViH~A~~~~~~--~--~~~~~~~~~~Nv~gt~~ll~aa~~~~----~~~r~v~~SS~~~~~~~~~~---~~~~~E  144 (351)
T PLN02650         77 -GCTGVFHVATPMDFE--S--KDPENEVIKPTVNGMLSIMKACAKAK----TVRRIVFTSSAGTVNVEEHQ---KPVYDE  144 (351)
T ss_pred             -CCCEEEEeCCCCCCC--C--CCchhhhhhHHHHHHHHHHHHHHhcC----CceEEEEecchhhcccCCCC---CCccCc
Confidence             579999999864321  1  12235778999999999999987641    13689999997554332110   000111


Q ss_pred             hhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCC----
Q 022103          186 EELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG----  261 (302)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~----  261 (302)
                      +.+...+..                 ...+.+...|+.||.+.|.+++.++.+   +|++++.+.|+.+.+|....    
T Consensus       145 ~~~~~~~~~-----------------~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gi~~~ilRp~~v~Gp~~~~~~~~  204 (351)
T PLN02650        145 DCWSDLDFC-----------------RRKKMTGWMYFVSKTLAEKAAWKYAAE---NGLDFISIIPTLVVGPFISTSMPP  204 (351)
T ss_pred             ccCCchhhh-----------------hccccccchHHHHHHHHHHHHHHHHHH---cCCeEEEECCCceECCCCCCCCCc
Confidence            111110000                 011112357999999999999999887   68999999999998874211    


Q ss_pred             ---------------------CCCCCHHHHHHHHHHHhh
Q 022103          262 ---------------------QGSHTADEAADVGARLLL  279 (302)
Q Consensus       262 ---------------------~~~~~~~~~a~~~~~l~~  279 (302)
                                           ...+..++++..++.++.
T Consensus       205 ~~~~~~~~~~~~~~~~~~~~~r~~v~V~Dva~a~~~~l~  243 (351)
T PLN02650        205 SLITALSLITGNEAHYSIIKQGQFVHLDDLCNAHIFLFE  243 (351)
T ss_pred             cHHHHHHHhcCCccccCcCCCcceeeHHHHHHHHHHHhc
Confidence                                 123578999999988876

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.80  E-value=9.8e-18  Score=157.65  Aligned_cols=200  Identities=24%  Similarity=0.186  Sum_probs=139.6

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      +.+++++|||||+|+||.+++++|+++|++|++++|+.++.+.....+.. +.++.++.+|+++.+++.++++       
T Consensus         7 ~~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~-------   78 (353)
T PLN02896          7 ESATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKE-GDRLRLFRADLQEEGSFDEAVK-------   78 (353)
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhcc-CCeEEEEECCCCCHHHHHHHHc-------
Confidence            45678999999999999999999999999999999987766655544432 3568889999999998877765       


Q ss_pred             CccEEEEcCCCCCCCC--CCCCHHHH--HHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccc
Q 022103          107 ALDILVNNAGVSFNDI--YKNTVEHA--ETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSI  182 (302)
Q Consensus       107 ~id~lv~~aG~~~~~~--~~~~~e~~--~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~  182 (302)
                      .+|+|||+|+......  ...+++.+  .+++++|+.+++++++++.+..    ..++||++||...+............
T Consensus        79 ~~d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~----~~~~~v~~SS~~vyg~~~~~~~~~~~  154 (353)
T PLN02896         79 GCDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSK----TVKRVVFTSSISTLTAKDSNGRWRAV  154 (353)
T ss_pred             CCCEEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcC----CccEEEEEechhhccccccCCCCCCc
Confidence            5799999999764321  22233333  4677888999999999987641    24789999998765322111000000


Q ss_pred             cchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCC
Q 022103          183 LEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSM  258 (302)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~  258 (302)
                      .+++...+...              .   .+.++....|+.||.+.|.+++.++++   .|+++..+.|+.+..|.
T Consensus       155 ~~E~~~~p~~~--------------~---~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~vyGp~  210 (353)
T PLN02896        155 VDETCQTPIDH--------------V---WNTKASGWVYVLSKLLTEEAAFKYAKE---NGIDLVSVITTTVAGPF  210 (353)
T ss_pred             cCcccCCcHHH--------------h---hccCCCCccHHHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCC
Confidence            11111111000              0   000122357999999999999999876   58999999998887764

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.80  E-value=7.9e-18  Score=157.35  Aligned_cols=227  Identities=18%  Similarity=0.111  Sum_probs=152.2

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhH-HHHHHHHh----hCCCceeEEEeeCCCHHHHHHHHHHH
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERG-QRAVESLS----EKGLPVNFFQLDVSDPSSIEAFVSWF  101 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~-~~~~~~l~----~~~~~~~~~~~Dlt~~~~~~~~~~~~  101 (302)
                      +.+++++|||||+|+||.+++++|+++|++|++++|+.+.. ....+.+.    ..+.++.++.+|++|.+++.++++.+
T Consensus         3 ~~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   82 (340)
T PLN02653          3 DPPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDI   82 (340)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHc
Confidence            45689999999999999999999999999999999875421 11122221    12346889999999999999988865


Q ss_pred             HhhCCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCccccc
Q 022103          102 KSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKS  181 (302)
Q Consensus       102 ~~~~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~  181 (302)
                           .+|+|||+|+.....   ...+.++..+++|+.++.++++++.+...+.....++|++||...+ +....+    
T Consensus        83 -----~~d~Vih~A~~~~~~---~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vy-g~~~~~----  149 (340)
T PLN02653         83 -----KPDEVYNLAAQSHVA---VSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMY-GSTPPP----  149 (340)
T ss_pred             -----CCCEEEECCcccchh---hhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHh-CCCCCC----
Confidence                 589999999975432   2334557778999999999999998876543112378888886433 221100    


Q ss_pred             ccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccC---CCcEEEEeecCcccCCC
Q 022103          182 ILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEG---EGISVNSYCPGFTQTSM  258 (302)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~---~gI~V~~v~PG~v~T~~  258 (302)
                      .                           .+...+.+...|+.||.+.+.+++.++.+++-   .++.++.+.|+...+.+
T Consensus       150 ~---------------------------~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~  202 (340)
T PLN02653        150 Q---------------------------SETTPFHPRSPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFV  202 (340)
T ss_pred             C---------------------------CCCCCCCCCChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCcccc
Confidence            0                           00011223467999999999999999988642   23444566665432111


Q ss_pred             -------------------CCC-----CCCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          259 -------------------TQG-----QGSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       259 -------------------~~~-----~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                                         ...     ......++++..++.++.. .   ..+.|.+..+..
T Consensus       203 ~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~a~a~~~~~~~-~---~~~~yni~~g~~  261 (340)
T PLN02653        203 TRKITRAVGRIKVGLQKKLFLGNLDASRDWGFAGDYVEAMWLMLQQ-E---KPDDYVVATEES  261 (340)
T ss_pred             hhHHHHHHHHHHcCCCCceEeCCCcceecceeHHHHHHHHHHHHhc-C---CCCcEEecCCCc
Confidence                               000     1225789999999988763 2   135566555543

>PLN02214 cinnamoyl-CoA reductase

Probab=99.79  E-value=1.1e-17  Score=156.90  Aligned_cols=221  Identities=17%  Similarity=0.168  Sum_probs=155.1

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHH-HHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQR-AVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~-~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      .++++++||||+|+||++++++|+++|++|++++|+.++... ....+.....++.++.+|++|.+++.++++       
T Consensus         8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   80 (342)
T PLN02214          8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAID-------   80 (342)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHh-------
Confidence            467899999999999999999999999999999998764322 122332222357889999999999888776       


Q ss_pred             CccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchh
Q 022103          107 ALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDE  186 (302)
Q Consensus       107 ~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~  186 (302)
                      .+|+|||+|+...        ++++..+++|+.++.++++++...     +.++||++||..+..+..... .....+++
T Consensus        81 ~~d~Vih~A~~~~--------~~~~~~~~~nv~gt~~ll~aa~~~-----~v~r~V~~SS~~avyg~~~~~-~~~~~~E~  146 (342)
T PLN02214         81 GCDGVFHTASPVT--------DDPEQMVEPAVNGAKFVINAAAEA-----KVKRVVITSSIGAVYMDPNRD-PEAVVDES  146 (342)
T ss_pred             cCCEEEEecCCCC--------CCHHHHHHHHHHHHHHHHHHHHhc-----CCCEEEEeccceeeeccCCCC-CCcccCcc
Confidence            5899999999642        235678999999999999998653     357999999976554422110 00012222


Q ss_pred             hhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC----
Q 022103          187 ELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ----  262 (302)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~----  262 (302)
                      .++....                    .......|+.||.+.|.+++.++.+   +|+++..+.|+.|..+.....    
T Consensus       147 ~~~~~~~--------------------~~~p~~~Y~~sK~~aE~~~~~~~~~---~g~~~v~lRp~~vyGp~~~~~~~~~  203 (342)
T PLN02214        147 CWSDLDF--------------------CKNTKNWYCYGKMVAEQAAWETAKE---KGVDLVVLNPVLVLGPPLQPTINAS  203 (342)
T ss_pred             cCCChhh--------------------ccccccHHHHHHHHHHHHHHHHHHH---cCCcEEEEeCCceECCCCCCCCCch
Confidence            2211000                    0012357999999999999999877   589999999999987653210    


Q ss_pred             --------------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCC
Q 022103          263 --------------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLD  295 (302)
Q Consensus       263 --------------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~  295 (302)
                                          ..+..+++|..++.++.. +.  ..|.+++..+
T Consensus       204 ~~~~~~~~~g~~~~~~~~~~~~i~V~Dva~a~~~al~~-~~--~~g~yn~~~~  253 (342)
T PLN02214        204 LYHVLKYLTGSAKTYANLTQAYVDVRDVALAHVLVYEA-PS--ASGRYLLAES  253 (342)
T ss_pred             HHHHHHHHcCCcccCCCCCcCeeEHHHHHHHHHHHHhC-cc--cCCcEEEecC
Confidence                                124578999988887763 21  3466666543

>PLN02572 UDP-sulfoquinovose synthase

Probab=99.78  E-value=1.4e-17  Score=161.50  Aligned_cols=207  Identities=14%  Similarity=0.094  Sum_probs=139.5

Q ss_pred             ccccccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhH----------------HHHHHHHh-hCCCceeEE
Q 022103           22 SSTKWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERG----------------QRAVESLS-EKGLPVNFF   84 (302)
Q Consensus        22 ~~~~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~----------------~~~~~~l~-~~~~~~~~~   84 (302)
                      +..+..+++++++||||+|+||++++++|+++|++|++++|.....                ....+.+. ..+.++.++
T Consensus        39 ~~~~~~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v  118 (442)
T PLN02572         39 PGSSSSSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELY  118 (442)
T ss_pred             CCCCccccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEE
Confidence            3445567889999999999999999999999999999987532110                01111111 123468899


Q ss_pred             EeeCCCHHHHHHHHHHHHhhCCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEe
Q 022103           85 QLDVSDPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNI  164 (302)
Q Consensus        85 ~~Dlt~~~~~~~~~~~~~~~~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~v  164 (302)
                      .+|++|.+.+.+++++.     ++|+|||+|+.........++++++..+++|+.|++++++++...-    ...++|++
T Consensus       119 ~~Dl~d~~~v~~~l~~~-----~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~g----v~~~~V~~  189 (442)
T PLN02572        119 VGDICDFEFLSEAFKSF-----EPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFA----PDCHLVKL  189 (442)
T ss_pred             ECCCCCHHHHHHHHHhC-----CCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhC----CCccEEEE
Confidence            99999999999888864     6899999997654333445566778889999999999999886641    12489999


Q ss_pred             cCCCcccccccCcccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCc
Q 022103          165 SSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGI  244 (302)
Q Consensus       165 sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI  244 (302)
                      ||...+... ..+     .++..+...+         ....+ .+.  ....+...|+.||.+.+.+++.++..   +|+
T Consensus       190 SS~~vYG~~-~~~-----~~E~~i~~~~---------~~~e~-~~~--~~~~P~s~Yg~SK~a~E~l~~~~~~~---~gl  248 (442)
T PLN02572        190 GTMGEYGTP-NID-----IEEGYITITH---------NGRTD-TLP--YPKQASSFYHLSKVHDSHNIAFTCKA---WGI  248 (442)
T ss_pred             ecceecCCC-CCC-----Cccccccccc---------ccccc-ccc--CCCCCCCcchhHHHHHHHHHHHHHHh---cCC
Confidence            998654211 100     0000000000         00000 000  01122367999999999999988876   689


Q ss_pred             EEEEeecCcccCCC
Q 022103          245 SVNSYCPGFTQTSM  258 (302)
Q Consensus       245 ~V~~v~PG~v~T~~  258 (302)
                      ++..+.|+.+..+.
T Consensus       249 ~~v~lR~~~vyGp~  262 (442)
T PLN02572        249 RATDLNQGVVYGVR  262 (442)
T ss_pred             CEEEEecccccCCC
Confidence            99999999997764

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.77  E-value=3.6e-17  Score=151.23  Aligned_cols=221  Identities=19%  Similarity=0.213  Sum_probs=150.1

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHh--hCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLS--EKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~--~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      ++|+++||||+|+||++++++|+++|++|++++|+.+..........  ....++.++.+|+++.+++..+++       
T Consensus         3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   75 (322)
T PLN02662          3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVD-------   75 (322)
T ss_pred             CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHc-------
Confidence            46899999999999999999999999999999998754333222211  112467899999999988877766       


Q ss_pred             CccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcc-cc-cccCcccccccc
Q 022103          107 ALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGT-LS-KVRNPNIKSILE  184 (302)
Q Consensus       107 ~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~-~~-~~~~~~~~~~~~  184 (302)
                      .+|+|||+|+......  .+  ..+..+++|+.++.++++++....    +.++||++||..+. .+ .+..+.  ...+
T Consensus        76 ~~d~Vih~A~~~~~~~--~~--~~~~~~~~nv~gt~~ll~a~~~~~----~~~~~v~~SS~~~~~y~~~~~~~~--~~~~  145 (322)
T PLN02662         76 GCEGVFHTASPFYHDV--TD--PQAELIDPAVKGTLNVLRSCAKVP----SVKRVVVTSSMAAVAYNGKPLTPD--VVVD  145 (322)
T ss_pred             CCCEEEEeCCcccCCC--CC--hHHHHHHHHHHHHHHHHHHHHhCC----CCCEEEEccCHHHhcCCCcCCCCC--CcCC
Confidence            5799999999753211  11  124789999999999999986531    34689999997642 21 111000  0011


Q ss_pred             hhh-hcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC-
Q 022103          185 DEE-LSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ-  262 (302)
Q Consensus       185 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~-  262 (302)
                      ++. ..+..                     .......|+.+|.+.+.+++.++++   .|++++.+.|+.+.++..... 
T Consensus       146 E~~~~~p~~---------------------~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lRp~~v~Gp~~~~~~  201 (322)
T PLN02662        146 ETWFSDPAF---------------------CEESKLWYVLSKTLAEEAAWKFAKE---NGIDMVTINPAMVIGPLLQPTL  201 (322)
T ss_pred             cccCCChhH---------------------hhcccchHHHHHHHHHHHHHHHHHH---cCCcEEEEeCCcccCCCCCCCC
Confidence            110 00000                     0001146999999999999988876   589999999999988763211 


Q ss_pred             ----------------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeec
Q 022103          263 ----------------------GSHTADEAADVGARLLLLHPQQLPTAKFYIG  293 (302)
Q Consensus       263 ----------------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~  293 (302)
                                            ..+..+++|..++.++..+ .  ..|.+++.
T Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~-~--~~~~~~~~  251 (322)
T PLN02662        202 NTSAEAILNLINGAQTFPNASYRWVDVRDVANAHIQAFEIP-S--ASGRYCLV  251 (322)
T ss_pred             CchHHHHHHHhcCCccCCCCCcCeEEHHHHHHHHHHHhcCc-C--cCCcEEEe
Confidence                                  1256799999998887632 2  24666654

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=99.76  E-value=1.1e-16  Score=150.32  Aligned_cols=221  Identities=14%  Similarity=0.079  Sum_probs=147.2

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHcCCEEE-EEecChhhHH-HHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCc
Q 022103           31 TIAIVTGANKGIGFALVKRLAELGLTVI-LTARDVERGQ-RAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAAL  108 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~G~~V~-l~~r~~~~~~-~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~i  108 (302)
                      +++|||||+|+||.++++.|.++|++++ +++|...... .....+. .+.++.++.+|++|.+++++++++.     .+
T Consensus         2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~   75 (355)
T PRK10217          2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVA-QSERFAFEKVDICDRAELARVFTEH-----QP   75 (355)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhhhhcc-cCCceEEEECCCcChHHHHHHHhhc-----CC
Confidence            5799999999999999999999998755 4454322111 0111111 2336778899999999998888753     68


Q ss_pred             cEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhh---cC-CCCCcEEEecCCCcccccccCcccccccc
Q 022103          109 DILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFR---RS-PSKSRILNISSRLGTLSKVRNPNIKSILE  184 (302)
Q Consensus       109 d~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~---~~-~~~~~iv~vsS~~~~~~~~~~~~~~~~~~  184 (302)
                      |+|||+||....   ..+.+.++..+++|+.+++++++++.+.+.   .. ....++|++||...+........      
T Consensus        76 D~Vih~A~~~~~---~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~------  146 (355)
T PRK10217         76 DCVMHLAAESHV---DRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDD------  146 (355)
T ss_pred             CEEEECCcccCc---chhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCC------
Confidence            999999997532   234466788999999999999999987542   11 12468999999764321110000      


Q ss_pred             hhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCC---
Q 022103          185 DEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG---  261 (302)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~---  261 (302)
                                             ...+.....+...|+.||.+.+.+++.++++   .++++..+.|+.+..+-...   
T Consensus       147 -----------------------~~~E~~~~~p~s~Y~~sK~~~e~~~~~~~~~---~~~~~~i~r~~~v~Gp~~~~~~~  200 (355)
T PRK10217        147 -----------------------FFTETTPYAPSSPYSASKASSDHLVRAWLRT---YGLPTLITNCSNNYGPYHFPEKL  200 (355)
T ss_pred             -----------------------CcCCCCCCCCCChhHHHHHHHHHHHHHHHHH---hCCCeEEEeeeeeeCCCCCcccH
Confidence                                   0000011123478999999999999999887   46778778887765544211   


Q ss_pred             -----------------------CCCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCc
Q 022103          262 -----------------------QGSHTADEAADVGARLLLLHPQQLPTAKFYIGLDP  296 (302)
Q Consensus       262 -----------------------~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  296 (302)
                                             ......++++..+..++.. .   ..|..|.+.++
T Consensus       201 ~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~D~a~a~~~~~~~-~---~~~~~yni~~~  254 (355)
T PRK10217        201 IPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYCVATT-G---KVGETYNIGGH  254 (355)
T ss_pred             HHHHHHHHhcCCCceEeCCCCeeeCcCcHHHHHHHHHHHHhc-C---CCCCeEEeCCC
Confidence                                   0126689999998888752 2   23555555443

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.75  E-value=8.3e-17  Score=150.33  Aligned_cols=194  Identities=18%  Similarity=0.189  Sum_probs=133.5

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHH--HHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVE--SLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~--~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      +++++++||||+|+||++++++|+++|++|+++.|+.+.......  .+.. ..++.++.+|++|.+++.++++      
T Consensus         7 ~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~------   79 (338)
T PLN00198          7 TGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQE-LGDLKIFGADLTDEESFEAPIA------   79 (338)
T ss_pred             CCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcCC-CCceEEEEcCCCChHHHHHHHh------
Confidence            457899999999999999999999999999988888654332221  2221 1357889999999998887765      


Q ss_pred             CCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccch
Q 022103          106 AALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILED  185 (302)
Q Consensus       106 g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~  185 (302)
                       .+|+|||+|+.....    ..+.....+++|+.++.++++++...   . ..++||++||........... .....++
T Consensus        80 -~~d~vih~A~~~~~~----~~~~~~~~~~~nv~g~~~ll~a~~~~---~-~~~~~v~~SS~~~~g~~~~~~-~~~~~~E  149 (338)
T PLN00198         80 -GCDLVFHVATPVNFA----SEDPENDMIKPAIQGVHNVLKACAKA---K-SVKRVILTSSAAAVSINKLSG-TGLVMNE  149 (338)
T ss_pred             -cCCEEEEeCCCCccC----CCChHHHHHHHHHHHHHHHHHHHHhc---C-CccEEEEeecceeeeccCCCC-CCceecc
Confidence             579999999963211    11223567899999999999998663   1 357999999987653221000 0000111


Q ss_pred             hhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCC
Q 022103          186 EELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSM  258 (302)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~  258 (302)
                      +.+....                +.+.. +++...|+.||.+.|.+++.++++   +|+++..+.|+.+..|.
T Consensus       150 ~~~~~~~----------------~~~~~-~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~~R~~~vyGp~  202 (338)
T PLN00198        150 KNWTDVE----------------FLTSE-KPPTWGYPASKTLAEKAAWKFAEE---NNIDLITVIPTLMAGPS  202 (338)
T ss_pred             ccCCchh----------------hhhhc-CCccchhHHHHHHHHHHHHHHHHh---cCceEEEEeCCceECCC
Confidence            1111100                00011 123467999999999999999876   58999999999987763

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=99.75  E-value=1.9e-16  Score=148.78  Aligned_cols=186  Identities=17%  Similarity=0.057  Sum_probs=133.4

Q ss_pred             ccccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHh----h-CCCceeEEEeeCCCHHHHHHHH
Q 022103           24 TKWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLS----E-KGLPVNFFQLDVSDPSSIEAFV   98 (302)
Q Consensus        24 ~~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~----~-~~~~~~~~~~Dlt~~~~~~~~~   98 (302)
                      ++..+++++++||||+|.||.+++++|.++|++|++++|.............    . ...++.++.+|+.|.+.+..++
T Consensus         9 ~~~~~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~   88 (348)
T PRK15181          9 TKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKAC   88 (348)
T ss_pred             hcccccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHh
Confidence            3456778999999999999999999999999999999986543222222111    1 1135778999999998887776


Q ss_pred             HHHHhhCCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcc
Q 022103           99 SWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPN  178 (302)
Q Consensus        99 ~~~~~~~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~  178 (302)
                      +       .+|+|||.|+.....   ...++....+++|+.|+.++++.+...     +..++|++||..........+ 
T Consensus        89 ~-------~~d~ViHlAa~~~~~---~~~~~~~~~~~~Nv~gt~nll~~~~~~-----~~~~~v~~SS~~vyg~~~~~~-  152 (348)
T PRK15181         89 K-------NVDYVLHQAALGSVP---RSLKDPIATNSANIDGFLNMLTAARDA-----HVSSFTYAASSSTYGDHPDLP-  152 (348)
T ss_pred             h-------CCCEEEECccccCch---hhhhCHHHHHHHHHHHHHHHHHHHHHc-----CCCeEEEeechHhhCCCCCCC-
Confidence            5       489999999975432   122345567999999999999887542     456899999875542211110 


Q ss_pred             cccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCC
Q 022103          179 IKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSM  258 (302)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~  258 (302)
                                                    ..+...+.+...|+.||.+.+.+++.++.+   +|+++..+.|+.+..|-
T Consensus       153 ------------------------------~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~vyGp~  199 (348)
T PRK15181        153 ------------------------------KIEERIGRPLSPYAVTKYVNELYADVFARS---YEFNAIGLRYFNVFGRR  199 (348)
T ss_pred             ------------------------------CCCCCCCCCCChhhHHHHHHHHHHHHHHHH---hCCCEEEEEecceeCcC
Confidence                                          001111122357999999999999988766   58999999999887764

>PLN02240 UDP-glucose 4-epimerase

Probab=99.74  E-value=2.5e-16  Score=147.50  Aligned_cols=179  Identities=16%  Similarity=0.112  Sum_probs=126.1

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHh----hCCCceeEEEeeCCCHHHHHHHHHHHH
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLS----EKGLPVNFFQLDVSDPSSIEAFVSWFK  102 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~----~~~~~~~~~~~Dlt~~~~~~~~~~~~~  102 (302)
                      ++++++++||||+|+||.+++++|+++|++|++++|...........+.    ..+.++.++.+|++|.+++.+++++. 
T Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~-   80 (352)
T PLN02240          2 SLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFAST-   80 (352)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhC-
Confidence            5678999999999999999999999999999999875433222222221    12346788999999999998888753 


Q ss_pred             hhCCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccc
Q 022103          103 SNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSI  182 (302)
Q Consensus       103 ~~~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~  182 (302)
                          .+|+|||+||.....   .+.+.+.+.+++|+.++.++++++..    . +.+++|++||.... +......   .
T Consensus        81 ----~~d~vih~a~~~~~~---~~~~~~~~~~~~n~~~~~~l~~~~~~----~-~~~~~v~~Ss~~vy-g~~~~~~---~  144 (352)
T PLN02240         81 ----RFDAVIHFAGLKAVG---ESVAKPLLYYDNNLVGTINLLEVMAK----H-GCKKLVFSSSATVY-GQPEEVP---C  144 (352)
T ss_pred             ----CCCEEEEccccCCcc---ccccCHHHHHHHHHHHHHHHHHHHHH----c-CCCEEEEEccHHHh-CCCCCCC---C
Confidence                689999999975322   23356778999999999999986633    2 35789999996433 2211100   0


Q ss_pred             cchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeec
Q 022103          183 LEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCP  251 (302)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~P  251 (302)
                       +                          +.....+...|+.+|.+.+.+++.++.+.  .++.+..+.+
T Consensus       145 -~--------------------------E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~~R~  184 (352)
T PLN02240        145 -T--------------------------EEFPLSATNPYGRTKLFIEEICRDIHASD--PEWKIILLRY  184 (352)
T ss_pred             -C--------------------------CCCCCCCCCHHHHHHHHHHHHHHHHHHhc--CCCCEEEEee
Confidence             0                          00112234689999999999999988652  3566666654

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.73  E-value=3.8e-16  Score=143.32  Aligned_cols=215  Identities=15%  Similarity=0.087  Sum_probs=146.6

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcC--CEEEEEecChh-hHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCc
Q 022103           32 IAIVTGANKGIGFALVKRLAELG--LTVILTARDVE-RGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAAL  108 (302)
Q Consensus        32 ~vlItGas~gIG~ala~~l~~~G--~~V~l~~r~~~-~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~i  108 (302)
                      +++||||+|+||.+++++|++.|  ++|++++|... ........+.. ...+.++.+|++|++++.++++..     .+
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~-----~~   74 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLED-NPRYRFVKGDIGDRELVSRLFTEH-----QP   74 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhcc-CCCcEEEEcCCcCHHHHHHHHhhc-----CC
Confidence            48999999999999999999987  78988876421 11111222221 236788899999999999888753     58


Q ss_pred             cEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhh
Q 022103          109 DILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEEL  188 (302)
Q Consensus       109 d~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  188 (302)
                      |+|||+|+.....   .+.+.++..+++|+.++.++++++...+.    ..++|++||...........           
T Consensus        75 d~vi~~a~~~~~~---~~~~~~~~~~~~n~~~~~~l~~~~~~~~~----~~~~i~~Ss~~v~g~~~~~~-----------  136 (317)
T TIGR01181        75 DAVVHFAAESHVD---RSISGPAAFIETNVVGTYTLLEAVRKYWH----EFRFHHISTDEVYGDLEKGD-----------  136 (317)
T ss_pred             CEEEEcccccCch---hhhhCHHHHHHHHHHHHHHHHHHHHhcCC----CceEEEeeccceeCCCCCCC-----------
Confidence            9999999975432   23455677899999999999988766432    34799999865432211100           


Q ss_pred             cHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC------
Q 022103          189 SEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ------  262 (302)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~------  262 (302)
                                         ..-+...+.+...|+.+|.+.+.+++.++.+   .++++..+.|+.+..+.....      
T Consensus       137 -------------------~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~i~G~~~~~~~~~~~~  194 (317)
T TIGR01181       137 -------------------AFTETTPLAPSSPYSASKAASDHLVRAYHRT---YGLPALITRCSNNYGPYQFPEKLIPLM  194 (317)
T ss_pred             -------------------CcCCCCCCCCCCchHHHHHHHHHHHHHHHHH---hCCCeEEEEeccccCCCCCcccHHHHH
Confidence                               0000111222367999999999999999876   578999999998876543210      


Q ss_pred             --------------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCc
Q 022103          263 --------------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDP  296 (302)
Q Consensus       263 --------------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  296 (302)
                                          .....++++..+..++. ..   ..|..|.+.++
T Consensus       195 ~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~~~~~~~-~~---~~~~~~~~~~~  244 (317)
T TIGR01181       195 ITNALAGKPLPVYGDGQQVRDWLYVEDHCRAIYLVLE-KG---RVGETYNIGGG  244 (317)
T ss_pred             HHHHhcCCCceEeCCCceEEeeEEHHHHHHHHHHHHc-CC---CCCceEEeCCC
Confidence                                01446889988888875 22   23555555443

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.73  E-value=1.9e-16  Score=148.35  Aligned_cols=222  Identities=18%  Similarity=0.070  Sum_probs=143.4

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhh-----HHHHHHHHh-hCCCceeEEEeeCCCHHHHHHHHHHHHhh
Q 022103           31 TIAIVTGANKGIGFALVKRLAELGLTVILTARDVER-----GQRAVESLS-EKGLPVNFFQLDVSDPSSIEAFVSWFKSN  104 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~-----~~~~~~~l~-~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~  104 (302)
                      |++|||||+|+||.+++++|+++|++|++++|+.+.     +....+.+. ..+..+.++.+|++|.+++.++++.+   
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~---   77 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEI---   77 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhC---
Confidence            689999999999999999999999999999998642     221111111 11235789999999999999888865   


Q ss_pred             CCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccc
Q 022103          105 FAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILE  184 (302)
Q Consensus       105 ~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~  184 (302)
                        .+|+|||+|+.....   ...+.....+++|+.++.++++++.+.-.+  ...++|++||...+......+       
T Consensus        78 --~~d~ViH~Aa~~~~~---~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~--~~~~~v~~SS~~vyg~~~~~~-------  143 (343)
T TIGR01472        78 --KPTEIYNLAAQSHVK---VSFEIPEYTADVDGIGTLRLLEAVRTLGLI--KSVKFYQASTSELYGKVQEIP-------  143 (343)
T ss_pred             --CCCEEEECCcccccc---hhhhChHHHHHHHHHHHHHHHHHHHHhCCC--cCeeEEEeccHHhhCCCCCCC-------
Confidence              589999999975432   122334567889999999999999774111  124899999975442111100       


Q ss_pred             hhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCC---CcEEEEeecCcccCCC---
Q 022103          185 DEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGE---GISVNSYCPGFTQTSM---  258 (302)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~---gI~V~~v~PG~v~T~~---  258 (302)
                                              ..+...+.+...|+.||.+.+.+++.++.+++-.   ++.++...|+.-..-+   
T Consensus       144 ------------------------~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~  199 (343)
T TIGR01472       144 ------------------------QNETTPFYPRSPYAAAKLYAHWITVNYREAYGLFAVNGILFNHESPRRGENFVTRK  199 (343)
T ss_pred             ------------------------CCCCCCCCCCChhHHHHHHHHHHHHHHHHHhCCceEEEeecccCCCCCCccccchH
Confidence                                    0001112234689999999999999998875211   1223444454211100   


Q ss_pred             ---------------------CCCCCCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          259 ---------------------TQGQGSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       259 ---------------------~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                                           .........++++..++.++.. +.   .|.|.+.++..
T Consensus       200 ~~~~~~~~~~~~~~~~~~g~g~~~rd~i~V~D~a~a~~~~~~~-~~---~~~yni~~g~~  255 (343)
T TIGR01472       200 ITRAAAKIKLGLQEKLYLGNLDAKRDWGHAKDYVEAMWLMLQQ-DK---PDDYVIATGET  255 (343)
T ss_pred             HHHHHHHHHcCCCCceeeCCCccccCceeHHHHHHHHHHHHhc-CC---CccEEecCCCc
Confidence                                 0001226689999998887753 21   25555555443

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PLN02686 cinnamoyl-CoA reductase

Probab=99.73  E-value=8.7e-16  Score=145.54  Aligned_cols=232  Identities=13%  Similarity=0.179  Sum_probs=151.3

Q ss_pred             cccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhC------CCceeEEEeeCCCHHHHHHHH
Q 022103           25 KWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEK------GLPVNFFQLDVSDPSSIEAFV   98 (302)
Q Consensus        25 ~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~------~~~~~~~~~Dlt~~~~~~~~~   98 (302)
                      ....++|++|||||+|+||.+++++|+++|++|+++.|+.++.+.. +++...      +..+.++.+|++|.+++.+++
T Consensus        48 ~~~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l-~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i  126 (367)
T PLN02686         48 GADAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKL-REMEMFGEMGRSNDGIWTVMANLTEPESLHEAF  126 (367)
T ss_pred             ccCCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHhhhccccccCCceEEEEcCCCCHHHHHHHH
Confidence            4557789999999999999999999999999999988987665543 233211      125788899999999998888


Q ss_pred             HHHHhhCCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCc-ccccccCc
Q 022103           99 SWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLG-TLSKVRNP  177 (302)
Q Consensus        99 ~~~~~~~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~-~~~~~~~~  177 (302)
                      +       .+|.++|.|+.....-..   .......++|+.++.++++++...   . +..++|++||..+ ..+.....
T Consensus       127 ~-------~~d~V~hlA~~~~~~~~~---~~~~~~~~~nv~gt~~llea~~~~---~-~v~r~V~~SS~~~~vyg~~~~~  192 (367)
T PLN02686        127 D-------GCAGVFHTSAFVDPAGLS---GYTKSMAELEAKASENVIEACVRT---E-SVRKCVFTSSLLACVWRQNYPH  192 (367)
T ss_pred             H-------hccEEEecCeeecccccc---cccchhhhhhHHHHHHHHHHHHhc---C-CccEEEEeccHHHhcccccCCC
Confidence            7       368999999875331000   011244677899999998887542   1 3568999999742 22210000


Q ss_pred             ccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCC-CCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccC
Q 022103          178 NIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQG-WPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQT  256 (302)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T  256 (302)
                      ......+++.                     |.+.. .+.+...|+.||.+.+.+++.++.+   +|+++++|+|+.|.+
T Consensus       193 ~~~~~i~E~~---------------------~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~gl~~v~lRp~~vyG  248 (367)
T PLN02686        193 DLPPVIDEES---------------------WSDESFCRDNKLWYALGKLKAEKAAWRAARG---KGLKLATICPALVTG  248 (367)
T ss_pred             CCCcccCCCC---------------------CCChhhcccccchHHHHHHHHHHHHHHHHHh---cCceEEEEcCCceEC
Confidence            0000011111                     11110 0112356999999999999998876   689999999999998


Q ss_pred             CCCCCC---------------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCc
Q 022103          257 SMTQGQ---------------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDP  296 (302)
Q Consensus       257 ~~~~~~---------------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  296 (302)
                      |.....                     .....++++..++.++..+......+.| +..+.
T Consensus       249 p~~~~~~~~~~~~~~~g~~~~~g~g~~~~v~V~Dva~A~~~al~~~~~~~~~~~y-i~~g~  308 (367)
T PLN02686        249 PGFFRRNSTATIAYLKGAQEMLADGLLATADVERLAEAHVCVYEAMGNKTAFGRY-ICFDH  308 (367)
T ss_pred             CCCCCCCChhHHHHhcCCCccCCCCCcCeEEHHHHHHHHHHHHhccCCCCCCCcE-EEeCC
Confidence            853210                     1255789999888877532111223444 55554

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.71  E-value=9e-16  Score=148.18  Aligned_cols=206  Identities=19%  Similarity=0.176  Sum_probs=166.2

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHhhC--CCceeEEEeeCCCHHHHHHHHHHHH
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGL-TVILTARDVERGQRAVESLSEK--GLPVNFFQLDVSDPSSIEAFVSWFK  102 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dlt~~~~~~~~~~~~~  102 (302)
                      ..++||+++||||+|.||.++++++++.+. ++++.+|+.-++.....++++.  ..++.++.+|+.|.+.+.++++.. 
T Consensus       246 ~~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~-  324 (588)
T COG1086         246 AMLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGH-  324 (588)
T ss_pred             hHcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcC-
Confidence            348899999999999999999999999985 6999999999999999998874  357899999999999999999854 


Q ss_pred             hhCCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccc
Q 022103          103 SNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSI  182 (302)
Q Consensus       103 ~~~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~  182 (302)
                          ++|+++|.|+.-.-|+.|..   +.+.+.+|++|+.++++++...     +..++|++|+..+..|.         
T Consensus       325 ----kvd~VfHAAA~KHVPl~E~n---P~Eai~tNV~GT~nv~~aa~~~-----~V~~~V~iSTDKAV~Pt---------  383 (588)
T COG1086         325 ----KVDIVFHAAALKHVPLVEYN---PEEAIKTNVLGTENVAEAAIKN-----GVKKFVLISTDKAVNPT---------  383 (588)
T ss_pred             ----CCceEEEhhhhccCcchhcC---HHHHHHHhhHhHHHHHHHHHHh-----CCCEEEEEecCcccCCc---------
Confidence                79999999998776755544   4567999999999999999775     67899999998876442         


Q ss_pred             cchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCC----
Q 022103          183 LEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSM----  258 (302)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~----  258 (302)
                                                          ..|++||...|.++.+++......+.++.+|.=|.|-...    
T Consensus       384 ------------------------------------NvmGaTKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSrGSVi  427 (588)
T COG1086         384 ------------------------------------NVMGATKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSRGSVI  427 (588)
T ss_pred             ------------------------------------hHhhHHHHHHHHHHHHHhhccCCCCcEEEEEEecceecCCCCCH
Confidence                                                6799999999999999998765446788888877664322    


Q ss_pred             --------------------CCCCCCCCHHHHHHHHHHHhhcCCCCCCCcceeecCC
Q 022103          259 --------------------TQGQGSHTADEAADVGARLLLLHPQQLPTAKFYIGLD  295 (302)
Q Consensus       259 --------------------~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~  295 (302)
                                          +|-+  .+.+|.++.+++....    ..+|.+|+.+=
T Consensus       428 PlFk~QI~~GgplTvTdp~mtRyf--MTI~EAv~LVlqA~a~----~~gGeifvldM  478 (588)
T COG1086         428 PLFKKQIAEGGPLTVTDPDMTRFF--MTIPEAVQLVLQAGAI----AKGGEIFVLDM  478 (588)
T ss_pred             HHHHHHHHcCCCccccCCCceeEE--EEHHHHHHHHHHHHhh----cCCCcEEEEcC
Confidence                                1111  4678888888777542    24577666654

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=99.70  E-value=8.4e-16  Score=140.53  Aligned_cols=221  Identities=19%  Similarity=0.152  Sum_probs=151.3

Q ss_pred             EEeCCCchHHHHHHHHHHHcC--CEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCccEE
Q 022103           34 IVTGANKGIGFALVKRLAELG--LTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDIL  111 (302)
Q Consensus        34 lItGas~gIG~ala~~l~~~G--~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id~l  111 (302)
                      |||||+|.||.+++++|.++|  ++|.++++......  ....... ....++.+|++|.+++.++++       .+|+|
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~--~~~~~~~-~~~~~~~~Di~d~~~l~~a~~-------g~d~V   70 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKF--LKDLQKS-GVKEYIQGDITDPESLEEALE-------GVDVV   70 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEccccccccc--chhhhcc-cceeEEEeccccHHHHHHHhc-------CCceE
Confidence            699999999999999999999  78988888764322  1111111 123499999999999999888       57999


Q ss_pred             EEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhhcHH
Q 022103          112 VNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEE  191 (302)
Q Consensus       112 v~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~  191 (302)
                      ||+|+.....    .....+..+++|+.|+.++++++...     +..++|++||......+........  .+|.    
T Consensus        71 ~H~Aa~~~~~----~~~~~~~~~~vNV~GT~nvl~aa~~~-----~VkrlVytSS~~vv~~~~~~~~~~~--~dE~----  135 (280)
T PF01073_consen   71 FHTAAPVPPW----GDYPPEEYYKVNVDGTRNVLEAARKA-----GVKRLVYTSSISVVFDNYKGDPIIN--GDED----  135 (280)
T ss_pred             EEeCcccccc----CcccHHHHHHHHHHHHHHHHHHHHHc-----CCCEEEEEcCcceeEeccCCCCccc--CCcC----
Confidence            9999975432    13456778999999999999988653     5789999999998866332111000  0000    


Q ss_pred             HHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHH-Hcc-CCCcEEEEeecCcccCCCCCCC-------
Q 022103          192 QIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAK-RYE-GEGISVNSYCPGFTQTSMTQGQ-------  262 (302)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~-e~~-~~gI~V~~v~PG~v~T~~~~~~-------  262 (302)
                                       |-.  .+.....|+.||+..|.++..... ++. ...++..+|+|..|..|.....       
T Consensus       136 -----------------~~~--~~~~~~~Y~~SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~~~~~~~  196 (280)
T PF01073_consen  136 -----------------TPY--PSSPLDPYAESKALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQRLVPRLVKM  196 (280)
T ss_pred             -----------------Ccc--cccccCchHHHHHHHHHHHHhhcccccccccceeEEEEeccEEeCcccccccchhhHH
Confidence                             000  011346799999999999988665 111 1258999999999988754322       


Q ss_pred             -----------------CCCCHHHHHHHHHHHhh--cCC--CCCCCcceeecCCccc
Q 022103          263 -----------------GSHTADEAADVGARLLL--LHP--QQLPTAKFYIGLDPFV  298 (302)
Q Consensus       263 -----------------~~~~~~~~a~~~~~l~~--~~~--~~~~~G~~~~~~~~~~  298 (302)
                                       .....+.+|+..+....  ..+  .....|+.|.+.+..+
T Consensus       197 ~~~g~~~~~~g~~~~~~~~vyV~NvA~ahvlA~~~L~~~~~~~~~~G~~y~itd~~p  253 (280)
T PF01073_consen  197 VRSGLFLFQIGDGNNLFDFVYVENVAHAHVLAAQALLEPGKPERVAGQAYFITDGEP  253 (280)
T ss_pred             HHhcccceeecCCCceECcEeHHHHHHHHHHHHHHhccccccccCCCcEEEEECCCc
Confidence                             11557888887654321  122  3557787777766544

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.69  E-value=1.9e-15  Score=135.60  Aligned_cols=195  Identities=19%  Similarity=0.239  Sum_probs=129.8

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCH-HHHHHHHHHHHhhC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP-SSIEAFVSWFKSNF  105 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~-~~~~~~~~~~~~~~  105 (302)
                      +.++++++||||+|+||++++++|+++|++|+++.|+.++.....   . .+..+.++.+|+++. +.+.+.+   .   
T Consensus        14 ~~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~---~-~~~~~~~~~~Dl~d~~~~l~~~~---~---   83 (251)
T PLN00141         14 NVKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSL---P-QDPSLQIVRADVTEGSDKLVEAI---G---   83 (251)
T ss_pred             cccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhc---c-cCCceEEEEeeCCCCHHHHHHHh---h---
Confidence            456789999999999999999999999999999999986644322   1 133688899999983 3332222   1   


Q ss_pred             CCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccch
Q 022103          106 AALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILED  185 (302)
Q Consensus       106 g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~  185 (302)
                      ..+|+||+++|.....    +.   ...+++|+.+..++++++..    . +.++||++||..........+        
T Consensus        84 ~~~d~vi~~~g~~~~~----~~---~~~~~~n~~~~~~ll~a~~~----~-~~~~iV~iSS~~v~g~~~~~~--------  143 (251)
T PLN00141         84 DDSDAVICATGFRRSF----DP---FAPWKVDNFGTVNLVEACRK----A-GVTRFILVSSILVNGAAMGQI--------  143 (251)
T ss_pred             cCCCEEEECCCCCcCC----CC---CCceeeehHHHHHHHHHHHH----c-CCCEEEEEccccccCCCcccc--------
Confidence            2689999999864211    10   11246888899999888742    2 468999999986432111100        


Q ss_pred             hhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHH-HHHHHHH-ccCCCcEEEEeecCcccCCCCCC--
Q 022103          186 EELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAY-TMVLAKR-YEGEGISVNSYCPGFTQTSMTQG--  261 (302)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~-~~~la~e-~~~~gI~V~~v~PG~v~T~~~~~--  261 (302)
                                                     ....|...|.....+ .+..+++ +...|++++.|+||++.+++...  
T Consensus       144 -------------------------------~~~~~~~~~~~~~~~~~k~~~e~~l~~~gi~~~iirpg~~~~~~~~~~~  192 (251)
T PLN00141        144 -------------------------------LNPAYIFLNLFGLTLVAKLQAEKYIRKSGINYTIVRPGGLTNDPPTGNI  192 (251)
T ss_pred             -------------------------------cCcchhHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECCCccCCCCCceE
Confidence                                           012355544433322 2333333 24578999999999998765321  


Q ss_pred             ---------CCCCCHHHHHHHHHHHhhcCC
Q 022103          262 ---------QGSHTADEAADVGARLLLLHP  282 (302)
Q Consensus       262 ---------~~~~~~~~~a~~~~~l~~~~~  282 (302)
                               .+..+++++|..++.++..++
T Consensus       193 ~~~~~~~~~~~~i~~~dvA~~~~~~~~~~~  222 (251)
T PLN00141        193 VMEPEDTLYEGSISRDQVAEVAVEALLCPE  222 (251)
T ss_pred             EECCCCccccCcccHHHHHHHHHHHhcChh
Confidence                     124789999999999987443

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.69  E-value=2.8e-15  Score=140.57  Aligned_cols=214  Identities=15%  Similarity=0.104  Sum_probs=138.7

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCE-EEEEecCh--hhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCc
Q 022103           32 IAIVTGANKGIGFALVKRLAELGLT-VILTARDV--ERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAAL  108 (302)
Q Consensus        32 ~vlItGas~gIG~ala~~l~~~G~~-V~l~~r~~--~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~i  108 (302)
                      +++||||+|+||.+++++|+++|++ |+.+++..  ...+... .+. .+.++.++.+|++|.+++++++++.     .+
T Consensus         2 kilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~   74 (352)
T PRK10084          2 KILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLA-DVS-DSERYVFEHADICDRAELDRIFAQH-----QP   74 (352)
T ss_pred             eEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHH-hcc-cCCceEEEEecCCCHHHHHHHHHhc-----CC
Confidence            5899999999999999999999976 55555532  1222211 221 1245778999999999999988753     69


Q ss_pred             cEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCC----CCCcEEEecCCCcccccccCcccccccc
Q 022103          109 DILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSP----SKSRILNISSRLGTLSKVRNPNIKSILE  184 (302)
Q Consensus       109 d~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~----~~~~iv~vsS~~~~~~~~~~~~~~~~~~  184 (302)
                      |+|||+||.....   .+.+..+..+++|+.++.++++++.+.|.+..    ...++|++||...........+.   .+
T Consensus        75 d~vih~A~~~~~~---~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~---~~  148 (352)
T PRK10084         75 DAVMHLAAESHVD---RSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEV---EN  148 (352)
T ss_pred             CEEEECCcccCCc---chhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccccc---cc
Confidence            9999999975322   12234567899999999999999988764321    23589999987644221100000   00


Q ss_pred             hhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCC---
Q 022103          185 DEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG---  261 (302)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~---  261 (302)
                      .+...                  ...+...+.+...|+.||.+.+.+++.++++   +|+++..+.|+.+..+-...   
T Consensus       149 ~~~~~------------------~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~g~~~vilr~~~v~Gp~~~~~~~  207 (352)
T PRK10084        149 SEELP------------------LFTETTAYAPSSPYSASKASSDHLVRAWLRT---YGLPTIVTNCSNNYGPYHFPEKL  207 (352)
T ss_pred             cccCC------------------CccccCCCCCCChhHHHHHHHHHHHHHHHHH---hCCCEEEEeccceeCCCcCccch
Confidence            00000                  0000011223468999999999999999887   45666667776665443210   


Q ss_pred             ----------------C-------CCCCHHHHHHHHHHHhh
Q 022103          262 ----------------Q-------GSHTADEAADVGARLLL  279 (302)
Q Consensus       262 ----------------~-------~~~~~~~~a~~~~~l~~  279 (302)
                                      +       ..+..++++..+..++.
T Consensus       208 ~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~D~a~a~~~~l~  248 (352)
T PRK10084        208 IPLVILNALEGKPLPIYGKGDQIRDWLYVEDHARALYKVVT  248 (352)
T ss_pred             HHHHHHHHhcCCCeEEeCCCCeEEeeEEHHHHHHHHHHHHh
Confidence                            0       12667999999887775

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.68  E-value=3e-15  Score=139.48  Aligned_cols=175  Identities=17%  Similarity=0.170  Sum_probs=121.1

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhh-CCCceeEEEeeCCCHHHHHHHHHHHHhhCCCccE
Q 022103           32 IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSE-KGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDI  110 (302)
Q Consensus        32 ~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id~  110 (302)
                      +++||||+|+||++++++|+++|++|++++|..+........+.+ .+.++.++.+|++|.+++..+++.     ..+|+
T Consensus         2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~~d~   76 (338)
T PRK10675          2 RVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHD-----HAIDT   76 (338)
T ss_pred             eEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhc-----CCCCE
Confidence            589999999999999999999999999988754333333222222 123567889999999998888764     26999


Q ss_pred             EEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhhcH
Q 022103          111 LVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSE  190 (302)
Q Consensus       111 lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~  190 (302)
                      |||+||.....   ...+...+.+++|+.++.++++++..    . +.++||++||..........+             
T Consensus        77 vvh~a~~~~~~---~~~~~~~~~~~~n~~~~~~l~~~~~~----~-~~~~~v~~Ss~~~yg~~~~~~-------------  135 (338)
T PRK10675         77 VIHFAGLKAVG---ESVQKPLEYYDNNVNGTLRLISAMRA----A-NVKNLIFSSSATVYGDQPKIP-------------  135 (338)
T ss_pred             EEECCcccccc---chhhCHHHHHHHHHHHHHHHHHHHHH----c-CCCEEEEeccHHhhCCCCCCc-------------
Confidence            99999975321   12234567889999999999886543    3 457899999975432111000             


Q ss_pred             HHHHHHHHHHHhhhccCCCCCCCCC--cccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCc
Q 022103          191 EQIERFVGLFLQSVKDGTWKSQGWP--EIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGF  253 (302)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~  253 (302)
                                         .+...|  .+...|+.+|.+.|.+++.++.++  .++++..+.++.
T Consensus       136 -------------------~~E~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~ilR~~~  179 (338)
T PRK10675        136 -------------------YVESFPTGTPQSPYGKSKLMVEQILTDLQKAQ--PDWSIALLRYFN  179 (338)
T ss_pred             -------------------cccccCCCCCCChhHHHHHHHHHHHHHHHHhc--CCCcEEEEEeee
Confidence                               001111  124789999999999999998763  356666666433

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.67  E-value=7.9e-15  Score=129.07  Aligned_cols=174  Identities=25%  Similarity=0.263  Sum_probs=134.5

Q ss_pred             EEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCccEEE
Q 022103           33 AIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDILV  112 (302)
Q Consensus        33 vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id~lv  112 (302)
                      |+||||+|.||.++++.|.++|+.|+.+.|+.........+.     ++.++.+|+.|.+.++++++..     .+|.|+
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~-----~~~~~~~dl~~~~~~~~~~~~~-----~~d~vi   70 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKL-----NVEFVIGDLTDKEQLEKLLEKA-----NIDVVI   70 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHT-----TEEEEESETTSHHHHHHHHHHH-----TESEEE
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccc-----eEEEEEeecccccccccccccc-----CceEEE
Confidence            799999999999999999999999988888876544333322     7899999999999999999987     799999


Q ss_pred             EcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhhcHHH
Q 022103          113 NNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQ  192 (302)
Q Consensus       113 ~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (302)
                      |+|+....   ..+.+.....++.|+.+..++++.+...     +..++|++||..........+               
T Consensus        71 ~~a~~~~~---~~~~~~~~~~~~~n~~~~~~ll~~~~~~-----~~~~~i~~sS~~~y~~~~~~~---------------  127 (236)
T PF01370_consen   71 HLAAFSSN---PESFEDPEEIIEANVQGTRNLLEAAREA-----GVKRFIFLSSASVYGDPDGEP---------------  127 (236)
T ss_dssp             EEBSSSSH---HHHHHSHHHHHHHHHHHHHHHHHHHHHH-----TTSEEEEEEEGGGGTSSSSSS---------------
T ss_pred             Eeeccccc---cccccccccccccccccccccccccccc-----ccccccccccccccccccccc---------------
Confidence            99998531   1233566788899999999998888764     347999999954432221110               


Q ss_pred             HHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCC
Q 022103          193 IERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSM  258 (302)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~  258 (302)
                                      +.+...+.....|+.+|...+.+++.+.++   .++++..+.|+.+..+.
T Consensus       128 ----------------~~e~~~~~~~~~Y~~~K~~~e~~~~~~~~~---~~~~~~~~R~~~vyG~~  174 (236)
T PF01370_consen  128 ----------------IDEDSPINPLSPYGASKRAAEELLRDYAKK---YGLRVTILRPPNVYGPG  174 (236)
T ss_dssp             ----------------BETTSGCCHSSHHHHHHHHHHHHHHHHHHH---HTSEEEEEEESEEESTT
T ss_pred             ----------------cccccccccccccccccccccccccccccc---ccccccccccccccccc
Confidence                            011111233467999999999999999987   48999999999998887

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.67  E-value=9.8e-15  Score=134.84  Aligned_cols=207  Identities=21%  Similarity=0.168  Sum_probs=145.5

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCccEE
Q 022103           32 IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDIL  111 (302)
Q Consensus        32 ~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id~l  111 (302)
                      +++||||+|+||+++++.|+++|++|++++|+.++...    +.  ...+.++.+|++|.+++.++++       .+|++
T Consensus         2 ~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~--~~~~~~~~~D~~~~~~l~~~~~-------~~d~v   68 (328)
T TIGR03466         2 KVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRN----LE--GLDVEIVEGDLRDPASLRKAVA-------GCRAL   68 (328)
T ss_pred             eEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccc----cc--cCCceEEEeeCCCHHHHHHHHh-------CCCEE
Confidence            69999999999999999999999999999998754321    11  1257889999999998887776       57999


Q ss_pred             EEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhhcHH
Q 022103          112 VNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEE  191 (302)
Q Consensus       112 v~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~  191 (302)
                      ||+|+....     ..+.++..+++|+.++.++++++...     +.+++|++||...........   ...++..    
T Consensus        69 i~~a~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~~~~v~~SS~~~~~~~~~~~---~~~e~~~----  131 (328)
T TIGR03466        69 FHVAADYRL-----WAPDPEEMYAANVEGTRNLLRAALEA-----GVERVVYTSSVATLGVRGDGT---PADETTP----  131 (328)
T ss_pred             EEeceeccc-----CCCCHHHHHHHHHHHHHHHHHHHHHh-----CCCeEEEEechhhcCcCCCCC---CcCccCC----
Confidence            999986421     12345678999999999999987642     357999999987653211100   0000000    


Q ss_pred             HHHHHHHHHHhhhccCCCCCCCCC-cccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCC---------
Q 022103          192 QIERFVGLFLQSVKDGTWKSQGWP-EIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG---------  261 (302)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~---------  261 (302)
                                           ..| .....|+.+|.+.+.+++.++.+   .|+++..+.|+.+..+....         
T Consensus       132 ---------------------~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilR~~~~~G~~~~~~~~~~~~~~  187 (328)
T TIGR03466       132 ---------------------SSLDDMIGHYKRSKFLAEQAALEMAAE---KGLPVVIVNPSTPIGPRDIKPTPTGRIIV  187 (328)
T ss_pred             ---------------------CCcccccChHHHHHHHHHHHHHHHHHh---cCCCEEEEeCCccCCCCCCCCCcHHHHHH
Confidence                                 001 11357999999999999998876   58999999998886543211         


Q ss_pred             --------------CCCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCc
Q 022103          262 --------------QGSHTADEAADVGARLLLLHPQQLPTAKFYIGLDP  296 (302)
Q Consensus       262 --------------~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  296 (302)
                                    ......+++|..+..++.. +   ..|..|...+.
T Consensus       188 ~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~-~---~~~~~~~~~~~  232 (328)
T TIGR03466       188 DFLNGKMPAYVDTGLNLVHVDDVAEGHLLALER-G---RIGERYILGGE  232 (328)
T ss_pred             HHHcCCCceeeCCCcceEEHHHHHHHHHHHHhC-C---CCCceEEecCC
Confidence                          0124578889988877752 2   24666766543

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.65  E-value=7.7e-15  Score=135.11  Aligned_cols=179  Identities=18%  Similarity=0.132  Sum_probs=125.8

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCccEE
Q 022103           32 IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDIL  111 (302)
Q Consensus        32 ~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id~l  111 (302)
                      +++||||+|+||.+++++|.++|++|++++|...........+.+. .++..+.+|+++.+++.++++.     +.+|++
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~-----~~~d~v   74 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERI-TRVTFVEGDLRDRELLDRLFEE-----HKIDAV   74 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhccc-cceEEEECCCCCHHHHHHHHHh-----CCCcEE
Confidence            4799999999999999999999999998876543322222222221 2577889999999999888774     379999


Q ss_pred             EEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhhcHH
Q 022103          112 VNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEE  191 (302)
Q Consensus       112 v~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~  191 (302)
                      ||+||.....   .+.+...+.+.+|+.++..+++++..    . +.+++|++||.... +......    .+       
T Consensus        75 v~~ag~~~~~---~~~~~~~~~~~~n~~~~~~l~~~~~~----~-~~~~~v~~ss~~~~-g~~~~~~----~~-------  134 (328)
T TIGR01179        75 IHFAGLIAVG---ESVQDPLKYYRNNVVNTLNLLEAMQQ----T-GVKKFIFSSSAAVY-GEPSSIP----IS-------  134 (328)
T ss_pred             EECccccCcc---hhhcCchhhhhhhHHHHHHHHHHHHh----c-CCCEEEEecchhhc-CCCCCCC----cc-------
Confidence            9999975322   13334556789999999999987643    2 35789999886543 2111100    00       


Q ss_pred             HHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCC
Q 022103          192 QIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTS  257 (302)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~  257 (302)
                                         +...+.+...|+.+|++++.+++.++++.  .++++..+.|+.+..+
T Consensus       135 -------------------e~~~~~~~~~y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~g~  179 (328)
T TIGR01179       135 -------------------EDSPLGPINPYGRSKLMSERILRDLSKAD--PGLSYVILRYFNVAGA  179 (328)
T ss_pred             -------------------ccCCCCCCCchHHHHHHHHHHHHHHHHhc--cCCCEEEEecCcccCC
Confidence                               00111223679999999999999998752  4788999998766554

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PLN02427 UDP-apiose/xylose synthase

Probab=99.65  E-value=7.1e-15  Score=139.93  Aligned_cols=235  Identities=14%  Similarity=0.105  Sum_probs=145.4

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHc-CCEEEEEecChhhHHHHHHHHh-hCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAEL-GLTVILTARDVERGQRAVESLS-EKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~-G~~V~l~~r~~~~~~~~~~~l~-~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      .+.++|+||||+|.||++++++|+++ |++|++++|+.++......... ....++.++.+|++|.+.+.++++      
T Consensus        12 ~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~------   85 (386)
T PLN02427         12 IKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIK------   85 (386)
T ss_pred             ccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhh------
Confidence            44568999999999999999999998 5999999988655433221100 112368899999999998887775      


Q ss_pred             CCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccch
Q 022103          106 AALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILED  185 (302)
Q Consensus       106 g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~  185 (302)
                       .+|+|||+|+........   ++..+.+..|+.++.++++++..    . . .++|++||...+.......    ..++
T Consensus        86 -~~d~ViHlAa~~~~~~~~---~~~~~~~~~n~~gt~~ll~aa~~----~-~-~r~v~~SS~~vYg~~~~~~----~~e~  151 (386)
T PLN02427         86 -MADLTINLAAICTPADYN---TRPLDTIYSNFIDALPVVKYCSE----N-N-KRLIHFSTCEVYGKTIGSF----LPKD  151 (386)
T ss_pred             -cCCEEEEcccccChhhhh---hChHHHHHHHHHHHHHHHHHHHh----c-C-CEEEEEeeeeeeCCCcCCC----CCcc
Confidence             479999999975432111   12234567899999999887743    2 2 6899999976432111100    0000


Q ss_pred             hhhcHHHHHHHHHHHHhhhccCCCCC---CCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCC--
Q 022103          186 EELSEEQIERFVGLFLQSVKDGTWKS---QGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ--  260 (302)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~--  260 (302)
                      ....+..-  +.      .....+..   .+.......|+.||.+.|.+++.++..   .|+++..+.|+.+..+...  
T Consensus       152 ~p~~~~~~--~~------~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilR~~~vyGp~~~~~  220 (386)
T PLN02427        152 HPLRQDPA--FY------VLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFI  220 (386)
T ss_pred             cccccccc--cc------cccccccccccCCCCccccchHHHHHHHHHHHHHHHhh---cCCceEEecccceeCCCCCcc
Confidence            00000000  00      00000000   000011256999999999999887765   5899999999888765311  


Q ss_pred             -----------------------C------------CCCCCHHHHHHHHHHHhhcCCCCCCCcceeecCC
Q 022103          261 -----------------------G------------QGSHTADEAADVGARLLLLHPQQLPTAKFYIGLD  295 (302)
Q Consensus       261 -----------------------~------------~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~  295 (302)
                                             .            ...+..+++|..++.++..+ . ...|.+|...+
T Consensus       221 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~r~~i~V~Dva~ai~~al~~~-~-~~~g~~yni~~  288 (386)
T PLN02427        221 PGIDGPSEGVPRVLACFSNNLLRREPLKLVDGGQSQRTFVYIKDAIEAVLLMIENP-A-RANGHIFNVGN  288 (386)
T ss_pred             ccccccccccchHHHHHHHHHhcCCCeEEECCCCceECcEeHHHHHHHHHHHHhCc-c-cccCceEEeCC
Confidence                                   0            01256799999998887632 1 13455666554

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.64  E-value=1.7e-15  Score=137.68  Aligned_cols=200  Identities=19%  Similarity=0.173  Sum_probs=141.9

Q ss_pred             EEEeCCCchHHHHHHHHHHHcC-CEEEEEecChhhHHHHHHHHhhC--CCce----eEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           33 AIVTGANKGIGFALVKRLAELG-LTVILTARDVERGQRAVESLSEK--GLPV----NFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        33 vlItGas~gIG~ala~~l~~~G-~~V~l~~r~~~~~~~~~~~l~~~--~~~~----~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      ||||||+|.||.+++++|++.+ .++++++|+..++-...+++...  +.++    .++.+|+.|.+.+.+++++.    
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~----   76 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEY----   76 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT------
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhc----
Confidence            7999999999999999999998 47999999999999888888532  2234    34579999999999888865    


Q ss_pred             CCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccch
Q 022103          106 AALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILED  185 (302)
Q Consensus       106 g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~  185 (302)
                       ++|+|+|.|+.-.-++.+.   .+.+.+++|+.|+.++++++..+     +..++|++|+..+..|.            
T Consensus        77 -~pdiVfHaAA~KhVpl~E~---~p~eav~tNv~GT~nv~~aa~~~-----~v~~~v~ISTDKAv~Pt------------  135 (293)
T PF02719_consen   77 -KPDIVFHAAALKHVPLMED---NPFEAVKTNVLGTQNVAEAAIEH-----GVERFVFISTDKAVNPT------------  135 (293)
T ss_dssp             -T-SEEEE------HHHHCC---CHHHHHHHHCHHHHHHHHHHHHT-----T-SEEEEEEECGCSS--------------
T ss_pred             -CCCEEEEChhcCCCChHHh---CHHHHHHHHHHHHHHHHHHHHHc-----CCCEEEEccccccCCCC------------
Confidence             7999999999876665554   45667999999999999999875     57899999998775432            


Q ss_pred             hhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCC-----
Q 022103          186 EELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ-----  260 (302)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~-----  260 (302)
                                                       ..|++||...|.++.+++......+.++.+|.=|.|-..--.     
T Consensus       136 ---------------------------------nvmGatKrlaE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~GSVip~F  182 (293)
T PF02719_consen  136 ---------------------------------NVMGATKRLAEKLVQAANQYSGNSDTKFSSVRFGNVLGSRGSVIPLF  182 (293)
T ss_dssp             ---------------------------------SHHHHHHHHHHHHHHHHCCTSSSS--EEEEEEE-EETTGTTSCHHHH
T ss_pred             ---------------------------------cHHHHHHHHHHHHHHHHhhhCCCCCcEEEEEEecceecCCCcHHHHH
Confidence                                             679999999999999999987666788888888877432100     


Q ss_pred             -----CC------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecC
Q 022103          261 -----GQ------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGL  294 (302)
Q Consensus       261 -----~~------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~  294 (302)
                           +-            -..+++|+++.++......    ..|.+|+.+
T Consensus       183 ~~Qi~~g~PlTvT~p~mtRffmti~EAv~Lvl~a~~~~----~~geifvl~  229 (293)
T PF02719_consen  183 KKQIKNGGPLTVTDPDMTRFFMTIEEAVQLVLQAAALA----KGGEIFVLD  229 (293)
T ss_dssp             HHHHHTTSSEEECETT-EEEEE-HHHHHHHHHHHHHH------TTEEEEE-
T ss_pred             HHHHHcCCcceeCCCCcEEEEecHHHHHHHHHHHHhhC----CCCcEEEec
Confidence                 00            1167899999888886422    245555544

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.63  E-value=7.1e-14  Score=130.52  Aligned_cols=216  Identities=18%  Similarity=0.171  Sum_probs=140.9

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcC--CEEEEEecChhhH---HHHHHHHhhCC--------CceeEEEeeCCCH------H
Q 022103           32 IAIVTGANKGIGFALVKRLAELG--LTVILTARDVERG---QRAVESLSEKG--------LPVNFFQLDVSDP------S   92 (302)
Q Consensus        32 ~vlItGas~gIG~ala~~l~~~G--~~V~l~~r~~~~~---~~~~~~l~~~~--------~~~~~~~~Dlt~~------~   92 (302)
                      +++||||+|+||+++++.|+++|  ++|+++.|+.+..   +...+.+....        .++.++.+|++++      +
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~   80 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA   80 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence            48999999999999999999999  7899999986532   12222222111        4688999999864      2


Q ss_pred             HHHHHHHHHHhhCCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccc
Q 022103           93 SIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLS  172 (302)
Q Consensus        93 ~~~~~~~~~~~~~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~  172 (302)
                      ....+.       ..+|+|||||+.....      ...+...++|+.++.++++.+...     ...+++++||......
T Consensus        81 ~~~~~~-------~~~d~vih~a~~~~~~------~~~~~~~~~nv~g~~~ll~~a~~~-----~~~~~v~iSS~~v~~~  142 (367)
T TIGR01746        81 EWERLA-------ENVDTIVHNGALVNWV------YPYSELRAANVLGTREVLRLAASG-----RAKPLHYVSTISVLAA  142 (367)
T ss_pred             HHHHHH-------hhCCEEEeCCcEeccC------CcHHHHhhhhhHHHHHHHHHHhhC-----CCceEEEEccccccCC
Confidence            333322       3689999999975321      124567889999999998877542     3456999999876533


Q ss_pred             cccCcccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecC
Q 022103          173 KVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPG  252 (302)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG  252 (302)
                      ....+    ..+++..                     . ...+.....|+.+|.+.+.+++.++.    .|++++.+.||
T Consensus       143 ~~~~~----~~~~~~~---------------------~-~~~~~~~~~Y~~sK~~~E~~~~~~~~----~g~~~~i~Rpg  192 (367)
T TIGR01746       143 IDLST----VTEDDAI---------------------V-TPPPGLAGGYAQSKWVAELLVREASD----RGLPVTIVRPG  192 (367)
T ss_pred             cCCCC----ccccccc---------------------c-ccccccCCChHHHHHHHHHHHHHHHh----cCCCEEEECCC
Confidence            21110    0000000                     0 00011235799999999999887654    38999999999


Q ss_pred             cccCCCCCC----------------------------CCCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCc
Q 022103          253 FTQTSMTQG----------------------------QGSHTADEAADVGARLLLLHPQQLPTAKFYIGLDP  296 (302)
Q Consensus       253 ~v~T~~~~~----------------------------~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  296 (302)
                      .+.++....                            ....+.++++..++.++.. +.....|.+|...++
T Consensus       193 ~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~vddva~ai~~~~~~-~~~~~~~~~~~v~~~  263 (367)
T TIGR01746       193 RILGNSYTGAINSSDILWRMVKGCLALGAYPDSPELTEDLTPVDYVARAIVALSSQ-PAASAGGPVFHVVNP  263 (367)
T ss_pred             ceeecCCCCCCCchhHHHHHHHHHHHhCCCCCCCccccCcccHHHHHHHHHHHHhC-CCcccCCceEEecCC
Confidence            998752110                            0125678899988888753 322233666666654

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=99.62  E-value=7.5e-14  Score=130.92  Aligned_cols=217  Identities=17%  Similarity=0.153  Sum_probs=142.1

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHc-CCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCC-CHHHHHHHHHHHHhhCCCc
Q 022103           31 TIAIVTGANKGIGFALVKRLAEL-GLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVS-DPSSIEAFVSWFKSNFAAL  108 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~-G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt-~~~~~~~~~~~~~~~~g~i  108 (302)
                      ++|+||||+|.||.+++++|.++ |++|++++|+.++...    +.. ...+.++.+|++ +.+.+.++++       .+
T Consensus         2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~----~~~-~~~~~~~~~Dl~~~~~~~~~~~~-------~~   69 (347)
T PRK11908          2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGD----LVN-HPRMHFFEGDITINKEWIEYHVK-------KC   69 (347)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHH----hcc-CCCeEEEeCCCCCCHHHHHHHHc-------CC
Confidence            46999999999999999999986 7999999987644322    211 235888999998 6666655544       58


Q ss_pred             cEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhh
Q 022103          109 DILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEEL  188 (302)
Q Consensus       109 d~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  188 (302)
                      |+|||+|+...+..   ..++.+..+++|+.++.++++++..    . + .++|++||...+......+     .+++..
T Consensus        70 d~ViH~aa~~~~~~---~~~~p~~~~~~n~~~~~~ll~aa~~----~-~-~~~v~~SS~~vyg~~~~~~-----~~ee~~  135 (347)
T PRK11908         70 DVILPLVAIATPAT---YVKQPLRVFELDFEANLPIVRSAVK----Y-G-KHLVFPSTSEVYGMCPDEE-----FDPEAS  135 (347)
T ss_pred             CEEEECcccCChHH---hhcCcHHHHHHHHHHHHHHHHHHHh----c-C-CeEEEEecceeeccCCCcC-----cCcccc
Confidence            99999999754321   1234456789999999999887753    2 2 6899999986542211100     000000


Q ss_pred             cHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCC-------
Q 022103          189 SEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG-------  261 (302)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~-------  261 (302)
                      ..                 .+....  .+...|+.+|.+.+.+++.++.+   .|+.+..+.|+.+..+....       
T Consensus       136 ~~-----------------~~~~~~--~p~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilR~~~v~Gp~~~~~~~~~~~  193 (347)
T PRK11908        136 PL-----------------VYGPIN--KPRWIYACSKQLMDRVIWAYGME---EGLNFTLFRPFNWIGPGLDSIYTPKEG  193 (347)
T ss_pred             cc-----------------ccCcCC--CccchHHHHHHHHHHHHHHHHHH---cCCCeEEEeeeeeeCCCccCCCccccC
Confidence            00                 000000  11247999999999999998876   57888888887775543100       


Q ss_pred             ---------------------------CCCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCc
Q 022103          262 ---------------------------QGSHTADEAADVGARLLLLHPQQLPTAKFYIGLDP  296 (302)
Q Consensus       262 ---------------------------~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  296 (302)
                                                 ...+..++++..+..++..+ .....|..|...++
T Consensus       194 ~~~~i~~~~~~~~~~~~~~~~~~g~~~r~~i~v~D~a~a~~~~~~~~-~~~~~g~~yni~~~  254 (347)
T PRK11908        194 SSRVVTQFLGHIVRGEPISLVDGGSQKRAFTDIDDGIDALMKIIENK-DGVASGKIYNIGNP  254 (347)
T ss_pred             CcchHHHHHHHHhCCCceEEecCCceeeccccHHHHHHHHHHHHhCc-cccCCCCeEEeCCC
Confidence                                       01266789999998887632 22234666766553

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.62  E-value=6.1e-14  Score=125.80  Aligned_cols=217  Identities=15%  Similarity=0.078  Sum_probs=155.2

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHcC--CEEEEEecC-h-hhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           31 TIAIVTGANKGIGFALVKRLAELG--LTVILTARD-V-ERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~G--~~V~l~~r~-~-~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      +++|||||+|.||.++++.+.++.  .+|+.++.= - ...+.. +.+. ..++..++++|+.|.+.+.+++++-     
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l-~~~~-~~~~~~fv~~DI~D~~~v~~~~~~~-----   73 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENL-ADVE-DSPRYRFVQGDICDRELVDRLFKEY-----   73 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHH-Hhhh-cCCCceEEeccccCHHHHHHHHHhc-----
Confidence            468999999999999999999985  456776651 1 122222 2222 2358899999999999999999865     


Q ss_pred             CccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchh
Q 022103          107 ALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDE  186 (302)
Q Consensus       107 ~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~  186 (302)
                      .+|+++|-|+-+.-   +.+..+.+.-+++|+.|++.|++++..+..+    -|++.||.--........          
T Consensus        74 ~~D~VvhfAAESHV---DRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~----frf~HISTDEVYG~l~~~----------  136 (340)
T COG1088          74 QPDAVVHFAAESHV---DRSIDGPAPFIQTNVVGTYTLLEAARKYWGK----FRFHHISTDEVYGDLGLD----------  136 (340)
T ss_pred             CCCeEEEechhccc---cccccChhhhhhcchHHHHHHHHHHHHhccc----ceEEEeccccccccccCC----------
Confidence            79999999987653   2456667778999999999999999887532    589999976543221110          


Q ss_pred             hhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC----
Q 022103          187 ELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ----  262 (302)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~----  262 (302)
                                         .+.|-+.....+.++|+||||+.+++++++.+-   +|+.+....|..-..|..-..    
T Consensus       137 -------------------~~~FtE~tp~~PsSPYSASKAasD~lVray~~T---Yglp~~ItrcSNNYGPyqfpEKlIP  194 (340)
T COG1088         137 -------------------DDAFTETTPYNPSSPYSASKAASDLLVRAYVRT---YGLPATITRCSNNYGPYQFPEKLIP  194 (340)
T ss_pred             -------------------CCCcccCCCCCCCCCcchhhhhHHHHHHHHHHH---cCCceEEecCCCCcCCCcCchhhhH
Confidence                               112334444556689999999999999999987   689998888887776663331    


Q ss_pred             ----------------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          263 ----------------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       263 ----------------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                                            .....++-+.++...+.  ...  -|.+|+..+..
T Consensus       195 ~~I~nal~g~~lpvYGdG~~iRDWl~VeDh~~ai~~Vl~--kg~--~GE~YNIgg~~  247 (340)
T COG1088         195 LMIINALLGKPLPVYGDGLQIRDWLYVEDHCRAIDLVLT--KGK--IGETYNIGGGN  247 (340)
T ss_pred             HHHHHHHcCCCCceecCCcceeeeEEeHhHHHHHHHHHh--cCc--CCceEEeCCCc
Confidence                                  01445677776666665  222  28888877654

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=99.61  E-value=3.5e-14  Score=127.79  Aligned_cols=168  Identities=20%  Similarity=0.163  Sum_probs=126.9

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCccEE
Q 022103           32 IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDIL  111 (302)
Q Consensus        32 ~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id~l  111 (302)
                      ++|||||+|.||.+++.+|++.|++|++++.-.....+.+....     ..++.+|+.|.+.+++++++.     +||.|
T Consensus         2 ~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~~-----~~f~~gDi~D~~~L~~vf~~~-----~idaV   71 (329)
T COG1087           2 KVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKLQ-----FKFYEGDLLDRALLTAVFEEN-----KIDAV   71 (329)
T ss_pred             eEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhcc-----CceEEeccccHHHHHHHHHhc-----CCCEE
Confidence            69999999999999999999999999999986554444444321     689999999999999999976     89999


Q ss_pred             EEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhhcHH
Q 022103          112 VNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEE  191 (302)
Q Consensus       112 v~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~  191 (302)
                      +|-||...-+   -+.+.+...++.|+.|++.|++++...     +..+|||-||.+. .+.+..   ....+..+    
T Consensus        72 iHFAa~~~Vg---ESv~~Pl~Yy~NNv~gTl~Ll~am~~~-----gv~~~vFSStAav-YG~p~~---~PI~E~~~----  135 (329)
T COG1087          72 VHFAASISVG---ESVQNPLKYYDNNVVGTLNLIEAMLQT-----GVKKFIFSSTAAV-YGEPTT---SPISETSP----  135 (329)
T ss_pred             EECccccccc---hhhhCHHHHHhhchHhHHHHHHHHHHh-----CCCEEEEecchhh-cCCCCC---cccCCCCC----
Confidence            9999975432   466778889999999999999988765     5677888666554 444332   01111111    


Q ss_pred             HHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeec
Q 022103          192 QIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCP  251 (302)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~P  251 (302)
                                             ..+..+|+.||...|.+.+.++..   .+.++..+.=
T Consensus       136 -----------------------~~p~NPYG~sKlm~E~iL~d~~~a---~~~~~v~LRY  169 (329)
T COG1087         136 -----------------------LAPINPYGRSKLMSEEILRDAAKA---NPFKVVILRY  169 (329)
T ss_pred             -----------------------CCCCCcchhHHHHHHHHHHHHHHh---CCCcEEEEEe
Confidence                                   112367999999999999999987   3466555543

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=99.59  E-value=1.4e-13  Score=139.93  Aligned_cols=219  Identities=15%  Similarity=0.093  Sum_probs=144.8

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHc-CCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHH-HHHHHHHHHhhCC
Q 022103           29 KETIAIVTGANKGIGFALVKRLAEL-GLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSS-IEAFVSWFKSNFA  106 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~-G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~-~~~~~~~~~~~~g  106 (302)
                      ++++|+||||+|.||.+++++|+++ |++|++++|........   +.  ...+.++.+|++|..+ ++++++       
T Consensus       314 ~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~---~~--~~~~~~~~gDl~d~~~~l~~~l~-------  381 (660)
T PRK08125        314 RRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRF---LG--HPRFHFVEGDISIHSEWIEYHIK-------  381 (660)
T ss_pred             cCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhh---cC--CCceEEEeccccCcHHHHHHHhc-------
Confidence            3568999999999999999999986 79999999987543221   11  2357888999998654 344433       


Q ss_pred             CccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchh
Q 022103          107 ALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDE  186 (302)
Q Consensus       107 ~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~  186 (302)
                      .+|+|||+|+...+..   ..+..+..+++|+.++.++++++...     . .++|++||...+ +.....    ..+++
T Consensus       382 ~~D~ViHlAa~~~~~~---~~~~~~~~~~~Nv~~t~~ll~a~~~~-----~-~~~V~~SS~~vy-g~~~~~----~~~E~  447 (660)
T PRK08125        382 KCDVVLPLVAIATPIE---YTRNPLRVFELDFEENLKIIRYCVKY-----N-KRIIFPSTSEVY-GMCTDK----YFDED  447 (660)
T ss_pred             CCCEEEECccccCchh---hccCHHHHHHhhHHHHHHHHHHHHhc-----C-CeEEEEcchhhc-CCCCCC----CcCcc
Confidence            5899999999764321   12234567899999999999988643     2 689999997543 221110    00110


Q ss_pred             hhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCC-----
Q 022103          187 ELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG-----  261 (302)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~-----  261 (302)
                      ....                   ...+.......|+.||.+.|.+++.++.+   +|+++..+.|+.+..+....     
T Consensus       448 ~~~~-------------------~~~p~~~p~s~Yg~sK~~~E~~~~~~~~~---~g~~~~ilR~~~vyGp~~~~~~~~~  505 (660)
T PRK08125        448 TSNL-------------------IVGPINKQRWIYSVSKQLLDRVIWAYGEK---EGLRFTLFRPFNWMGPRLDNLNAAR  505 (660)
T ss_pred             cccc-------------------ccCCCCCCccchHHHHHHHHHHHHHHHHh---cCCceEEEEEceeeCCCcccccccc
Confidence            0000                   00000012257999999999999998876   57899999999887653210     


Q ss_pred             -----------------------------CCCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCc
Q 022103          262 -----------------------------QGSHTADEAADVGARLLLLHPQQLPTAKFYIGLDP  296 (302)
Q Consensus       262 -----------------------------~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  296 (302)
                                                   +..+..++++..++.++.. ......|.+|...++
T Consensus       506 ~~~~~~i~~~i~~~~~~~~i~~~g~g~~~rd~i~v~Dva~a~~~~l~~-~~~~~~g~iyni~~~  568 (660)
T PRK08125        506 IGSSRAITQLILNLVEGSPIKLVDGGKQKRCFTDIRDGIEALFRIIEN-KDNRCDGQIINIGNP  568 (660)
T ss_pred             ccccchHHHHHHHhcCCCCeEEeCCCceeeceeeHHHHHHHHHHHHhc-cccccCCeEEEcCCC
Confidence                                         0125679999998888763 222235666665543

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.58  E-value=1.2e-13  Score=131.99  Aligned_cols=200  Identities=16%  Similarity=0.119  Sum_probs=139.9

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHH--HHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQR--AVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~--~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      .++++++||||+|+||+++++.|+++|++|++++|+..+...  ...++......+.++.+|++|.+++.++++...   
T Consensus        58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~---  134 (390)
T PLN02657         58 PKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEG---  134 (390)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhC---
Confidence            567899999999999999999999999999999998765321  111222223468899999999999999887541   


Q ss_pred             CCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccch
Q 022103          106 AALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILED  185 (302)
Q Consensus       106 g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~  185 (302)
                      ..+|+||||+|.....        ..+.+++|+.+..++++++..    . +.++||++||.....+             
T Consensus       135 ~~~D~Vi~~aa~~~~~--------~~~~~~vn~~~~~~ll~aa~~----~-gv~r~V~iSS~~v~~p-------------  188 (390)
T PLN02657        135 DPVDVVVSCLASRTGG--------VKDSWKIDYQATKNSLDAGRE----V-GAKHFVLLSAICVQKP-------------  188 (390)
T ss_pred             CCCcEEEECCccCCCC--------CccchhhHHHHHHHHHHHHHH----c-CCCEEEEEeeccccCc-------------
Confidence            2699999999853221        112356788888888887643    2 4678999999764311             


Q ss_pred             hhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCC-----
Q 022103          186 EELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ-----  260 (302)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~-----  260 (302)
                                                      ...|..+|...+...+.     ...++++..|.|+.+..++..     
T Consensus       189 --------------------------------~~~~~~sK~~~E~~l~~-----~~~gl~~tIlRp~~~~~~~~~~~~~~  231 (390)
T PLN02657        189 --------------------------------LLEFQRAKLKFEAELQA-----LDSDFTYSIVRPTAFFKSLGGQVEIV  231 (390)
T ss_pred             --------------------------------chHHHHHHHHHHHHHHh-----ccCCCCEEEEccHHHhcccHHHHHhh
Confidence                                            13478889988877654     136899999999776533210     


Q ss_pred             -C------CC--------CCCHHHHHHHHHHHhhcCCCCCCCcceeecCCc
Q 022103          261 -G------QG--------SHTADEAADVGARLLLLHPQQLPTAKFYIGLDP  296 (302)
Q Consensus       261 -~------~~--------~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  296 (302)
                       .      .+        .+..+++|..++.++..+ .  ..|..|...++
T Consensus       232 ~~g~~~~~~GdG~~~~~~~I~v~DlA~~i~~~~~~~-~--~~~~~~~Iggp  279 (390)
T PLN02657        232 KDGGPYVMFGDGKLCACKPISEADLASFIADCVLDE-S--KINKVLPIGGP  279 (390)
T ss_pred             ccCCceEEecCCcccccCceeHHHHHHHHHHHHhCc-c--ccCCEEEcCCC
Confidence             0      01        145678888888877522 2  34677877765

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=99.57  E-value=9.9e-14  Score=131.64  Aligned_cols=183  Identities=19%  Similarity=0.115  Sum_probs=125.0

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      |-.++++|+||||+|.||+++++.|.++|++|++++|......      ........++.+|+++.+.+..++.      
T Consensus        17 ~~~~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~------~~~~~~~~~~~~Dl~d~~~~~~~~~------   84 (370)
T PLN02695         17 WPSEKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHM------SEDMFCHEFHLVDLRVMENCLKVTK------   84 (370)
T ss_pred             CCCCCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEecccccc------ccccccceEEECCCCCHHHHHHHHh------
Confidence            4457889999999999999999999999999999998643210      1101124678899999888766654      


Q ss_pred             CCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCc-cccccc
Q 022103          106 AALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNP-NIKSIL  183 (302)
Q Consensus       106 g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~-~~~~~~  183 (302)
                       .+|+|||+|+.... ....   ......+..|+.++.++++++...     +.+++|++||...+-...... +. ...
T Consensus        85 -~~D~Vih~Aa~~~~~~~~~---~~~~~~~~~N~~~t~nll~aa~~~-----~vk~~V~~SS~~vYg~~~~~~~~~-~~~  154 (370)
T PLN02695         85 -GVDHVFNLAADMGGMGFIQ---SNHSVIMYNNTMISFNMLEAARIN-----GVKRFFYASSACIYPEFKQLETNV-SLK  154 (370)
T ss_pred             -CCCEEEEcccccCCccccc---cCchhhHHHHHHHHHHHHHHHHHh-----CCCEEEEeCchhhcCCccccCcCC-CcC
Confidence             57999999986432 2111   122345778999999999987542     357999999975432111000 00 000


Q ss_pred             chhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCC
Q 022103          184 EDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSM  258 (302)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~  258 (302)
                      +++                     .|    ...+...|+.+|.+.+.+++.++..   .|+++..+.|+.+..+-
T Consensus       155 E~~---------------------~~----p~~p~s~Yg~sK~~~E~~~~~~~~~---~g~~~~ilR~~~vyGp~  201 (370)
T PLN02695        155 ESD---------------------AW----PAEPQDAYGLEKLATEELCKHYTKD---FGIECRIGRFHNIYGPF  201 (370)
T ss_pred             ccc---------------------CC----CCCCCCHHHHHHHHHHHHHHHHHHH---hCCCEEEEEECCccCCC
Confidence            000                     00    1122468999999999999998776   58999999998887763

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.55  E-value=4.1e-13  Score=136.62  Aligned_cols=206  Identities=13%  Similarity=0.118  Sum_probs=139.1

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHc--CCEEEEEecCh--hhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhh
Q 022103           29 KETIAIVTGANKGIGFALVKRLAEL--GLTVILTARDV--ERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSN  104 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~--G~~V~l~~r~~--~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~  104 (302)
                      +.++||||||+|.||++++++|.++  |++|++++|..  ........ . ....++.++.+|++|.+.+..++..    
T Consensus         5 ~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~-~-~~~~~v~~~~~Dl~d~~~~~~~~~~----   78 (668)
T PLN02260          5 EPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNP-S-KSSPNFKFVKGDIASADLVNYLLIT----   78 (668)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhh-c-ccCCCeEEEECCCCChHHHHHHHhh----
Confidence            4578999999999999999999998  68999888752  22221111 1 1124688999999999887765532    


Q ss_pred             CCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccc
Q 022103          105 FAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILE  184 (302)
Q Consensus       105 ~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~  184 (302)
                       ..+|+|||+|+.....   ....+....+++|+.++.++++++...    +..+++|++||...+......+..   ..
T Consensus        79 -~~~D~ViHlAa~~~~~---~~~~~~~~~~~~Nv~gt~~ll~a~~~~----~~vkr~I~~SS~~vyg~~~~~~~~---~~  147 (668)
T PLN02260         79 -EGIDTIMHFAAQTHVD---NSFGNSFEFTKNNIYGTHVLLEACKVT----GQIRRFIHVSTDEVYGETDEDADV---GN  147 (668)
T ss_pred             -cCCCEEEECCCccCch---hhhhCHHHHHHHHHHHHHHHHHHHHhc----CCCcEEEEEcchHHhCCCcccccc---Cc
Confidence             3699999999976432   122334567899999999999887542    125799999997643221110000   00


Q ss_pred             hhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC--
Q 022103          185 DEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ--  262 (302)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~--  262 (302)
                                               .+.....+...|+.+|.+.|.+++.++.+   .++++..+.|+.|..+-....  
T Consensus       148 -------------------------~E~~~~~p~~~Y~~sK~~aE~~v~~~~~~---~~l~~vilR~~~VyGp~~~~~~~  199 (668)
T PLN02260        148 -------------------------HEASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKL  199 (668)
T ss_pred             -------------------------cccCCCCCCCCcHHHHHHHHHHHHHHHHH---cCCCEEEECcccccCcCCCcccH
Confidence                                     00000112367999999999999998876   578899999988876542110  


Q ss_pred             ------------------------CCCCHHHHHHHHHHHhh
Q 022103          263 ------------------------GSHTADEAADVGARLLL  279 (302)
Q Consensus       263 ------------------------~~~~~~~~a~~~~~l~~  279 (302)
                                              ..+..+++|..+..++.
T Consensus       200 i~~~~~~a~~g~~i~i~g~g~~~r~~ihV~Dva~a~~~~l~  240 (668)
T PLN02260        200 IPKFILLAMQGKPLPIHGDGSNVRSYLYCEDVAEAFEVVLH  240 (668)
T ss_pred             HHHHHHHHhCCCCeEEecCCCceEeeEEHHHHHHHHHHHHh
Confidence                                    11557889998887764

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=99.55  E-value=5.8e-13  Score=121.14  Aligned_cols=189  Identities=21%  Similarity=0.217  Sum_probs=130.5

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCccEE
Q 022103           32 IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDIL  111 (302)
Q Consensus        32 ~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id~l  111 (302)
                      +++||||+|.||.++++.|.++|++|+++.|+                     .+|+.+.++++++++..     .+|+|
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~---------------------~~d~~~~~~~~~~~~~~-----~~d~v   54 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGRVVVALTSS---------------------QLDLTDPEALERLLRAI-----RPDAV   54 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc---------------------ccCCCCHHHHHHHHHhC-----CCCEE
Confidence            37999999999999999999999999999885                     37999999998888753     68999


Q ss_pred             EEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhhcHH
Q 022103          112 VNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEE  191 (302)
Q Consensus       112 v~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~  191 (302)
                      ||+||.....   ......+..+++|+.++.++++++...      ..++|++||...+.+....+              
T Consensus        55 i~~a~~~~~~---~~~~~~~~~~~~n~~~~~~l~~~~~~~------~~~~v~~Ss~~vy~~~~~~~--------------  111 (287)
T TIGR01214        55 VNTAAYTDVD---GAESDPEKAFAVNALAPQNLARAAARH------GARLVHISTDYVFDGEGKRP--------------  111 (287)
T ss_pred             EECCcccccc---ccccCHHHHHHHHHHHHHHHHHHHHHc------CCeEEEEeeeeeecCCCCCC--------------
Confidence            9999975322   122345667899999999999987542      24899999975442211100              


Q ss_pred             HHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCC-C---------
Q 022103          192 QIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ-G---------  261 (302)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~-~---------  261 (302)
                                       ..+...+.....|+.+|.+.|.+++.+       +.++..+.|+.+..+... +         
T Consensus       112 -----------------~~E~~~~~~~~~Y~~~K~~~E~~~~~~-------~~~~~ilR~~~v~G~~~~~~~~~~~~~~~  167 (287)
T TIGR01214       112 -----------------YREDDATNPLNVYGQSKLAGEQAIRAA-------GPNALIVRTSWLYGGGGGRNFVRTMLRLA  167 (287)
T ss_pred             -----------------CCCCCCCCCcchhhHHHHHHHHHHHHh-------CCCeEEEEeeecccCCCCCCHHHHHHHHh
Confidence                             000011122367999999999888765       346788888888755421 1         


Q ss_pred             -------------CCCCCHHHHHHHHHHHhhcCCCCCCCcceeecCC
Q 022103          262 -------------QGSHTADEAADVGARLLLLHPQQLPTAKFYIGLD  295 (302)
Q Consensus       262 -------------~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~  295 (302)
                                   ......++++..+..++..+  ....|.+.+..+
T Consensus       168 ~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~--~~~~~~~ni~~~  212 (287)
T TIGR01214       168 GRGEELRVVDDQIGSPTYAKDLARVIAALLQRL--ARARGVYHLANS  212 (287)
T ss_pred             hcCCCceEecCCCcCCcCHHHHHHHHHHHHhhc--cCCCCeEEEECC
Confidence                         01144689999888887632  123455544443

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.54  E-value=1.9e-13  Score=125.33  Aligned_cols=174  Identities=23%  Similarity=0.179  Sum_probs=127.4

Q ss_pred             EEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCccEEE
Q 022103           33 AIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDILV  112 (302)
Q Consensus        33 vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id~lv  112 (302)
                      ||||||+|.||.+++++|.++|++|+.++|...+.....       ..+.++.+|+++.+.+...++..     . |.+|
T Consensus         3 ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-------~~~~~~~~d~~~~~~~~~~~~~~-----~-d~vi   69 (314)
T COG0451           3 ILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL-------SGVEFVVLDLTDRDLVDELAKGV-----P-DAVI   69 (314)
T ss_pred             EEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc-------cccceeeecccchHHHHHHHhcC-----C-CEEE
Confidence            999999999999999999999999999999876544322       35788899999996665555522     1 9999


Q ss_pred             EcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhhcHHH
Q 022103          113 NNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQ  192 (302)
Q Consensus       113 ~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (302)
                      |+|+.........+  .....+.+|+.++.++++++..    . ...+||+.||.....+. ...               
T Consensus        70 h~aa~~~~~~~~~~--~~~~~~~~nv~gt~~ll~aa~~----~-~~~~~v~~ss~~~~~~~-~~~---------------  126 (314)
T COG0451          70 HLAAQSSVPDSNAS--DPAEFLDVNVDGTLNLLEAARA----A-GVKRFVFASSVSVVYGD-PPP---------------  126 (314)
T ss_pred             EccccCchhhhhhh--CHHHHHHHHHHHHHHHHHHHHH----c-CCCeEEEeCCCceECCC-CCC---------------
Confidence            99998754311111  4567899999999999999977    1 46889996665544433 110               


Q ss_pred             HHHHHHHHHhhhccCCCCCC--CCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCC
Q 022103          193 IERFVGLFLQSVKDGTWKSQ--GWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ  260 (302)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~  260 (302)
                                     .+...  ..+.+...|+.+|.+.|.+++..+.+   .|+.+.++.|+.+..+...
T Consensus       127 ---------------~~~~E~~~~~~p~~~Yg~sK~~~E~~~~~~~~~---~~~~~~ilR~~~vyGp~~~  178 (314)
T COG0451         127 ---------------LPIDEDLGPPRPLNPYGVSKLAAEQLLRAYARL---YGLPVVILRPFNVYGPGDK  178 (314)
T ss_pred             ---------------CCcccccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCCeEEEeeeeeeCCCCC
Confidence                           00011  11222237999999999999999983   7899999999988765533

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=99.53  E-value=3e-13  Score=124.52  Aligned_cols=170  Identities=21%  Similarity=0.271  Sum_probs=113.6

Q ss_pred             EEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHh--hCCCccE
Q 022103           33 AIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKS--NFAALDI  110 (302)
Q Consensus        33 vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~--~~g~id~  110 (302)
                      ++||||+|.||++++++|+++|++++++.|+.......          .....+|++|..+...+++.+..  .++++|+
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~----------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~   71 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF----------VNLVDLDIADYMDKEDFLAQIMAGDDFGDIEA   71 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHH----------HhhhhhhhhhhhhHHHHHHHHhcccccCCccE
Confidence            79999999999999999999999777666654322111          01223567776666555555432  3457999


Q ss_pred             EEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhhcH
Q 022103          111 LVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSE  190 (302)
Q Consensus       111 lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~  190 (302)
                      |||+||.....  +.+   .+..+++|+.++.++++++..    . . .++|++||...+......+     .+      
T Consensus        72 Vih~A~~~~~~--~~~---~~~~~~~n~~~t~~ll~~~~~----~-~-~~~i~~SS~~vyg~~~~~~-----~~------  129 (308)
T PRK11150         72 IFHEGACSSTT--EWD---GKYMMDNNYQYSKELLHYCLE----R-E-IPFLYASSAATYGGRTDDF-----IE------  129 (308)
T ss_pred             EEECceecCCc--CCC---hHHHHHHHHHHHHHHHHHHHH----c-C-CcEEEEcchHHhCcCCCCC-----Cc------
Confidence            99999864322  112   235689999999999988754    2 2 4799999986542211100     00      


Q ss_pred             HHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCC
Q 022103          191 EQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTS  257 (302)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~  257 (302)
                                          +...+.+...|+.+|.+.+.+++.++.+   .++++..+.|+.+..+
T Consensus       130 --------------------E~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~vyG~  173 (308)
T PRK11150        130 --------------------EREYEKPLNVYGYSKFLFDEYVRQILPE---ANSQICGFRYFNVYGP  173 (308)
T ss_pred             --------------------cCCCCCCCCHHHHHHHHHHHHHHHHHHH---cCCCEEEEeeeeecCC
Confidence                                0011122367999999999999988765   5788888888777654

>PLN02206 UDP-glucuronate decarboxylase

Probab=99.51  E-value=5.1e-13  Score=129.57  Aligned_cols=177  Identities=19%  Similarity=0.168  Sum_probs=119.3

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHH-HHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQR-AVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~-~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      ++++|+||||+|.||++++++|.++|++|++++|....... .....  ...++.++.+|+.+..     +       ..
T Consensus       118 ~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~~~--~~~~~~~i~~D~~~~~-----l-------~~  183 (442)
T PLN02206        118 KGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHHF--SNPNFELIRHDVVEPI-----L-------LE  183 (442)
T ss_pred             CCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhhhc--cCCceEEEECCccChh-----h-------cC
Confidence            56799999999999999999999999999999876432221 11111  1235778888887653     1       15


Q ss_pred             ccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhh
Q 022103          108 LDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEE  187 (302)
Q Consensus       108 id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~  187 (302)
                      +|.|||+|+...+....   .+.+..+++|+.++.++++++...     + .++|++||...+......+.     .++ 
T Consensus       184 ~D~ViHlAa~~~~~~~~---~~p~~~~~~Nv~gt~nLleaa~~~-----g-~r~V~~SS~~VYg~~~~~p~-----~E~-  248 (442)
T PLN02206        184 VDQIYHLACPASPVHYK---FNPVKTIKTNVVGTLNMLGLAKRV-----G-ARFLLTSTSEVYGDPLQHPQ-----VET-  248 (442)
T ss_pred             CCEEEEeeeecchhhhh---cCHHHHHHHHHHHHHHHHHHHHHh-----C-CEEEEECChHHhCCCCCCCC-----Ccc-
Confidence            89999999875432111   234678999999999999888543     2 48999999765422111110     000 


Q ss_pred             hcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCC
Q 022103          188 LSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTS  257 (302)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~  257 (302)
                                          .|.....+.....|+.+|.+.|.+++.+.++   .|+++..+.|+.+..+
T Consensus       249 --------------------~~~~~~P~~~~s~Y~~SK~~aE~~~~~y~~~---~g~~~~ilR~~~vyGp  295 (442)
T PLN02206        249 --------------------YWGNVNPIGVRSCYDEGKRTAETLTMDYHRG---ANVEVRIARIFNTYGP  295 (442)
T ss_pred             --------------------ccccCCCCCccchHHHHHHHHHHHHHHHHHH---hCCCeEEEEeccccCC
Confidence                                1111111122467999999999999988766   5788888887766654

>CHL00194 ycf39 Ycf39; Provisional

Probab=99.51  E-value=1.1e-12  Score=121.64  Aligned_cols=188  Identities=15%  Similarity=0.135  Sum_probs=130.9

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCccEE
Q 022103           32 IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDIL  111 (302)
Q Consensus        32 ~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id~l  111 (302)
                      +++||||+|.||++++++|.++|++|++++|+.++...    +..  ..+.++.+|++|.+++.++++       .+|+|
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~----l~~--~~v~~v~~Dl~d~~~l~~al~-------g~d~V   68 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASF----LKE--WGAELVYGDLSLPETLPPSFK-------GVTAI   68 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhh----Hhh--cCCEEEECCCCCHHHHHHHHC-------CCCEE
Confidence            59999999999999999999999999999998754322    222  257889999999998877776       58999


Q ss_pred             EEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhhcHH
Q 022103          112 VNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEE  191 (302)
Q Consensus       112 v~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~  191 (302)
                      ||+++....        +.....++|+.++.++++++...     +..++|++||..... ..                 
T Consensus        69 i~~~~~~~~--------~~~~~~~~~~~~~~~l~~aa~~~-----gvkr~I~~Ss~~~~~-~~-----------------  117 (317)
T CHL00194         69 IDASTSRPS--------DLYNAKQIDWDGKLALIEAAKAA-----KIKRFIFFSILNAEQ-YP-----------------  117 (317)
T ss_pred             EECCCCCCC--------CccchhhhhHHHHHHHHHHHHHc-----CCCEEEEeccccccc-cC-----------------
Confidence            998864321        12235667888888888777542     467999999854310 00                 


Q ss_pred             HHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCC-----------
Q 022103          192 QIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ-----------  260 (302)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~-----------  260 (302)
                                                ...|..+|...+.+.+       ..|+++..+.|+.+..++..           
T Consensus       118 --------------------------~~~~~~~K~~~e~~l~-------~~~l~~tilRp~~~~~~~~~~~~~~~~~~~~  164 (317)
T CHL00194        118 --------------------------YIPLMKLKSDIEQKLK-------KSGIPYTIFRLAGFFQGLISQYAIPILEKQP  164 (317)
T ss_pred             --------------------------CChHHHHHHHHHHHHH-------HcCCCeEEEeecHHhhhhhhhhhhhhccCCc
Confidence                                      1347788888776653       25788888888755433211           


Q ss_pred             --------CCCCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcccC
Q 022103          261 --------GQGSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVK  299 (302)
Q Consensus       261 --------~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  299 (302)
                              ....+..+++|..++.++.. +.  ..|..|...++...
T Consensus       165 ~~~~~~~~~~~~i~v~Dva~~~~~~l~~-~~--~~~~~~ni~g~~~~  208 (317)
T CHL00194        165 IWITNESTPISYIDTQDAAKFCLKSLSL-PE--TKNKTFPLVGPKSW  208 (317)
T ss_pred             eEecCCCCccCccCHHHHHHHHHHHhcC-cc--ccCcEEEecCCCcc
Confidence                    01124568999999888753 22  24777877776543

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=99.51  E-value=2e-12  Score=125.33  Aligned_cols=212  Identities=17%  Similarity=0.108  Sum_probs=136.7

Q ss_pred             CcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCcc
Q 022103           30 ETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALD  109 (302)
Q Consensus        30 ~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id  109 (302)
                      ..+|+||||+|.||.++++.|.++|++|++++|...........+.. ..++.++..|+.+..     +       ..+|
T Consensus       120 ~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~~-~~~~~~~~~Di~~~~-----~-------~~~D  186 (436)
T PLN02166        120 RLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLFG-NPRFELIRHDVVEPI-----L-------LEVD  186 (436)
T ss_pred             CCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhcc-CCceEEEECcccccc-----c-------cCCC
Confidence            45899999999999999999999999999999864322221222211 235677888886542     1       2589


Q ss_pred             EEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhhc
Q 022103          110 ILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELS  189 (302)
Q Consensus       110 ~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~  189 (302)
                      +|||+|+.......   ..+.+..+++|+.++.++++++...     + .++|++||...+......+     .+++   
T Consensus       187 ~ViHlAa~~~~~~~---~~~p~~~~~~Nv~gT~nLleaa~~~-----g-~r~V~~SS~~VYg~~~~~p-----~~E~---  249 (436)
T PLN02166        187 QIYHLACPASPVHY---KYNPVKTIKTNVMGTLNMLGLAKRV-----G-ARFLLTSTSEVYGDPLEHP-----QKET---  249 (436)
T ss_pred             EEEECceeccchhh---ccCHHHHHHHHHHHHHHHHHHHHHh-----C-CEEEEECcHHHhCCCCCCC-----CCcc---
Confidence            99999986533211   1234678999999999999888653     2 4899999876542211110     0000   


Q ss_pred             HHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCC----CC---
Q 022103          190 EEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ----GQ---  262 (302)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~----~~---  262 (302)
                                        .|...........|+.+|.+.|.+++.+++.   .++++..+.|+.+..+-..    ..   
T Consensus       250 ------------------~~~~~~p~~p~s~Yg~SK~~aE~~~~~y~~~---~~l~~~ilR~~~vYGp~~~~~~~~~i~~  308 (436)
T PLN02166        250 ------------------YWGNVNPIGERSCYDEGKRTAETLAMDYHRG---AGVEVRIARIFNTYGPRMCLDDGRVVSN  308 (436)
T ss_pred             ------------------ccccCCCCCCCCchHHHHHHHHHHHHHHHHH---hCCCeEEEEEccccCCCCCCCccchHHH
Confidence                              0111111122367999999999999998776   5788888888777665311    00   


Q ss_pred             ---------------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCc
Q 022103          263 ---------------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDP  296 (302)
Q Consensus       263 ---------------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  296 (302)
                                           .....++++..+..++.. .   ..|.|-+..+.
T Consensus       309 ~i~~~l~~~~i~v~g~g~~~rdfi~V~Dva~ai~~~~~~-~---~~giyNIgs~~  359 (436)
T PLN02166        309 FVAQTIRKQPMTVYGDGKQTRSFQYVSDLVDGLVALMEG-E---HVGPFNLGNPG  359 (436)
T ss_pred             HHHHHhcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHHhc-C---CCceEEeCCCC
Confidence                                 115578899988877652 2   24554444444

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=99.50  E-value=6e-13  Score=122.58  Aligned_cols=143  Identities=17%  Similarity=0.174  Sum_probs=104.1

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCccEE
Q 022103           32 IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDIL  111 (302)
Q Consensus        32 ~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id~l  111 (302)
                      ++|||||+|.||.++++.|.++| +|+.++|...                 .+.+|++|.+.+.++++..     ++|+|
T Consensus         2 ~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~-----------------~~~~Dl~d~~~~~~~~~~~-----~~D~V   58 (299)
T PRK09987          2 NILLFGKTGQVGWELQRALAPLG-NLIALDVHST-----------------DYCGDFSNPEGVAETVRKI-----RPDVI   58 (299)
T ss_pred             eEEEECCCCHHHHHHHHHhhccC-CEEEeccccc-----------------cccCCCCCHHHHHHHHHhc-----CCCEE
Confidence            59999999999999999999999 7888887631                 2357999999998888753     68999


Q ss_pred             EEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhhcHH
Q 022103          112 VNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEE  191 (302)
Q Consensus       112 v~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~  191 (302)
                      ||+|+.....   ...++.+..+.+|+.++.++++++...      ..++|++||...+-+....               
T Consensus        59 ih~Aa~~~~~---~~~~~~~~~~~~N~~~~~~l~~aa~~~------g~~~v~~Ss~~Vy~~~~~~---------------  114 (299)
T PRK09987         59 VNAAAHTAVD---KAESEPEFAQLLNATSVEAIAKAANEV------GAWVVHYSTDYVFPGTGDI---------------  114 (299)
T ss_pred             EECCccCCcc---hhhcCHHHHHHHHHHHHHHHHHHHHHc------CCeEEEEccceEECCCCCC---------------
Confidence            9999976432   122334567889999999999988653      2479999987654221111               


Q ss_pred             HHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHH
Q 022103          192 QIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAK  237 (302)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~  237 (302)
                                      ++.+...+.+...|+.||.+.|.+++.+..
T Consensus       115 ----------------p~~E~~~~~P~~~Yg~sK~~~E~~~~~~~~  144 (299)
T PRK09987        115 ----------------PWQETDATAPLNVYGETKLAGEKALQEHCA  144 (299)
T ss_pred             ----------------CcCCCCCCCCCCHHHHHHHHHHHHHHHhCC
Confidence                            111111223346799999999999877653

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=99.48  E-value=1.3e-12  Score=120.22  Aligned_cols=172  Identities=16%  Similarity=0.109  Sum_probs=114.6

Q ss_pred             EEEeCCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCccEE
Q 022103           33 AIVTGANKGIGFALVKRLAELGL-TVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDIL  111 (302)
Q Consensus        33 vlItGas~gIG~ala~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id~l  111 (302)
                      |+||||+|.||.++++.|.++|+ .|++++|..... . ..++.     ...+..|+++.+.++.+.+.   .+..+|+|
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~-~~~~~-----~~~~~~d~~~~~~~~~~~~~---~~~~~D~v   70 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-K-FLNLA-----DLVIADYIDKEDFLDRLEKG---AFGKIEAI   70 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-h-hhhhh-----heeeeccCcchhHHHHHHhh---ccCCCCEE
Confidence            68999999999999999999998 688887764321 1 11111     13466788887776655543   34689999


Q ss_pred             EEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhhcHH
Q 022103          112 VNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEE  191 (302)
Q Consensus       112 v~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~  191 (302)
                      ||+|+....     +.++.+..+++|+.++.++++++...     + .++|++||...+ +....+    . +++     
T Consensus        71 vh~A~~~~~-----~~~~~~~~~~~n~~~~~~ll~~~~~~-----~-~~~v~~SS~~vy-~~~~~~----~-~e~-----  128 (314)
T TIGR02197        71 FHQGACSDT-----TETDGEYMMENNYQYSKRLLDWCAEK-----G-IPFIYASSAATY-GDGEAG----F-REG-----  128 (314)
T ss_pred             EECccccCc-----cccchHHHHHHHHHHHHHHHHHHHHh-----C-CcEEEEccHHhc-CCCCCC----c-ccc-----
Confidence            999997432     23455678999999999999987642     2 479999997643 221110    0 000     


Q ss_pred             HHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCC
Q 022103          192 QIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTS  257 (302)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~  257 (302)
                                          .+...+...|+.+|.+.+.+++....+. ..++++..+.|+.+..+
T Consensus       129 --------------------~~~~~p~~~Y~~sK~~~e~~~~~~~~~~-~~~~~~~~lR~~~vyG~  173 (314)
T TIGR02197       129 --------------------RELERPLNVYGYSKFLFDQYVRRRVLPE-ALSAQVVGLRYFNVYGP  173 (314)
T ss_pred             --------------------cCcCCCCCHHHHHHHHHHHHHHHHhHhh-ccCCceEEEEEeeccCC
Confidence                                0001124679999999999998744321 13467777777766554

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=99.47  E-value=1.1e-12  Score=119.21  Aligned_cols=167  Identities=20%  Similarity=0.186  Sum_probs=125.7

Q ss_pred             CcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHH---HHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           30 ETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVE---SLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        30 ~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~---~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      +++||||||+|.||.+++.+|.++|+.|++++.-........+   ++...+.++.++..|+.|.+.++++|++.     
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~-----   76 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEV-----   76 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhc-----
Confidence            5789999999999999999999999999999875544333333   33333578999999999999999999987     


Q ss_pred             CccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchh
Q 022103          107 ALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDE  186 (302)
Q Consensus       107 ~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~  186 (302)
                      .+|.|+|-|+...-+   .+.+.+......|+.|+++++..+..+     ....+|+.||..........|    .    
T Consensus        77 ~fd~V~Hfa~~~~vg---eS~~~p~~Y~~nNi~gtlnlLe~~~~~-----~~~~~V~sssatvYG~p~~ip----~----  140 (343)
T KOG1371|consen   77 KFDAVMHFAALAAVG---ESMENPLSYYHNNIAGTLNLLEVMKAH-----NVKALVFSSSATVYGLPTKVP----I----  140 (343)
T ss_pred             CCceEEeehhhhccc---hhhhCchhheehhhhhHHHHHHHHHHc-----CCceEEEecceeeecCcceee----c----
Confidence            699999999976432   344555788999999999998877654     367899988876653322211    0    


Q ss_pred             hhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHc
Q 022103          187 ELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRY  239 (302)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~  239 (302)
                                    ..+.       .. -.+...|+.+|.++|..++.+...+
T Consensus       141 --------------te~~-------~t-~~p~~pyg~tK~~iE~i~~d~~~~~  171 (343)
T KOG1371|consen  141 --------------TEED-------PT-DQPTNPYGKTKKAIEEIIHDYNKAY  171 (343)
T ss_pred             --------------cCcC-------CC-CCCCCcchhhhHHHHHHHHhhhccc
Confidence                          0000       11 1234779999999999999998875

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=99.44  E-value=1.3e-12  Score=119.80  Aligned_cols=163  Identities=18%  Similarity=0.129  Sum_probs=112.8

Q ss_pred             EEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCccEEEE
Q 022103           34 IVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDILVN  113 (302)
Q Consensus        34 lItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id~lv~  113 (302)
                      +||||+|.||.++++.|.+.|++|+++.+.                    ..+|+++.++++++++..     .+|+|||
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~--------------------~~~Dl~~~~~l~~~~~~~-----~~d~Vih   55 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH--------------------KELDLTRQADVEAFFAKE-----KPTYVIL   55 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeecc--------------------ccCCCCCHHHHHHHHhcc-----CCCEEEE
Confidence            699999999999999999999988765432                    137999999998887753     6899999


Q ss_pred             cCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhhcHHHH
Q 022103          114 NAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQI  193 (302)
Q Consensus       114 ~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (302)
                      +|+......  ...+..+..+++|+.++.++++++...     ..+++|++||...+.+....+          ..+.. 
T Consensus        56 ~A~~~~~~~--~~~~~~~~~~~~n~~~~~~ll~~~~~~-----~~~~~i~~SS~~vyg~~~~~~----------~~E~~-  117 (306)
T PLN02725         56 AAAKVGGIH--ANMTYPADFIRENLQIQTNVIDAAYRH-----GVKKLLFLGSSCIYPKFAPQP----------IPETA-  117 (306)
T ss_pred             eeeeecccc--hhhhCcHHHHHHHhHHHHHHHHHHHHc-----CCCeEEEeCceeecCCCCCCC----------CCHHH-
Confidence            999743210  111234456889999999999988653     357899999976432211110          00000 


Q ss_pred             HHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCC
Q 022103          194 ERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTS  257 (302)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~  257 (302)
                                     +...+..+....|+.+|.+.+.+++.+..+   .++++..+.|+.+..+
T Consensus       118 ---------------~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~~R~~~vyG~  163 (306)
T PLN02725        118 ---------------LLTGPPEPTNEWYAIAKIAGIKMCQAYRIQ---YGWDAISGMPTNLYGP  163 (306)
T ss_pred             ---------------hccCCCCCCcchHHHHHHHHHHHHHHHHHH---hCCCEEEEEecceeCC
Confidence                           000010111134999999999999888766   4788999999887665

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.41  E-value=1.5e-11  Score=104.58  Aligned_cols=171  Identities=19%  Similarity=0.213  Sum_probs=124.5

Q ss_pred             EEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCccEEE
Q 022103           33 AIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDILV  112 (302)
Q Consensus        33 vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id~lv  112 (302)
                      |+|+||+|.+|+.+++.|.++|++|+++.|+.++.++        ...+.++.+|+.|.+++.+.+.       ..|.+|
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~--------~~~~~~~~~d~~d~~~~~~al~-------~~d~vi   65 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED--------SPGVEIIQGDLFDPDSVKAALK-------GADAVI   65 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH--------CTTEEEEESCTTCHHHHHHHHT-------TSSEEE
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc--------ccccccceeeehhhhhhhhhhh-------hcchhh
Confidence            6899999999999999999999999999999988776        4589999999999988887777       689999


Q ss_pred             EcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhhcHHH
Q 022103          113 NNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQ  192 (302)
Q Consensus       113 ~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (302)
                      +++|....       +             ...++.++..+++. +..++|++|+...........               
T Consensus        66 ~~~~~~~~-------~-------------~~~~~~~~~a~~~~-~~~~~v~~s~~~~~~~~~~~~---------------  109 (183)
T PF13460_consen   66 HAAGPPPK-------D-------------VDAAKNIIEAAKKA-GVKRVVYLSSAGVYRDPPGLF---------------  109 (183)
T ss_dssp             ECCHSTTT-------H-------------HHHHHHHHHHHHHT-TSSEEEEEEETTGTTTCTSEE---------------
T ss_pred             hhhhhhcc-------c-------------cccccccccccccc-ccccceeeeccccCCCCCccc---------------
Confidence            99987532       0             34455666666666 577999999877554322110               


Q ss_pred             HHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC----------
Q 022103          193 IERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ----------  262 (302)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~----------  262 (302)
                                       .. ..++.+..|...|...+.+.    .+   .+++...|.|+.+..+.....          
T Consensus       110 -----------------~~-~~~~~~~~~~~~~~~~e~~~----~~---~~~~~~ivrp~~~~~~~~~~~~~~~~~~~~~  164 (183)
T PF13460_consen  110 -----------------SD-EDKPIFPEYARDKREAEEAL----RE---SGLNWTIVRPGWIYGNPSRSYRLIKEGGPQG  164 (183)
T ss_dssp             -----------------EG-GTCGGGHHHHHHHHHHHHHH----HH---STSEEEEEEESEEEBTTSSSEEEESSTSTTS
T ss_pred             -----------------cc-ccccchhhhHHHHHHHHHHH----Hh---cCCCEEEEECcEeEeCCCcceeEEeccCCCC
Confidence                             00 00111234666776665444    22   589999999999987764321          


Q ss_pred             -CCCCHHHHHHHHHHHhh
Q 022103          263 -GSHTADEAADVGARLLL  279 (302)
Q Consensus       263 -~~~~~~~~a~~~~~l~~  279 (302)
                       ..++.+++|..++.++.
T Consensus       165 ~~~i~~~DvA~~~~~~l~  182 (183)
T PF13460_consen  165 VNFISREDVAKAIVEALE  182 (183)
T ss_dssp             HCEEEHHHHHHHHHHHHH
T ss_pred             cCcCCHHHHHHHHHHHhC
Confidence             22667899998888764

...

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.41  E-value=9.9e-13  Score=118.02  Aligned_cols=183  Identities=19%  Similarity=0.195  Sum_probs=104.0

Q ss_pred             EeCCCchHHHHHHHHHHHcCC--EEEEEecChhh---HHHHHHHHhh----------CCCceeEEEeeCCCH------HH
Q 022103           35 VTGANKGIGFALVKRLAELGL--TVILTARDVER---GQRAVESLSE----------KGLPVNFFQLDVSDP------SS   93 (302)
Q Consensus        35 ItGas~gIG~ala~~l~~~G~--~V~l~~r~~~~---~~~~~~~l~~----------~~~~~~~~~~Dlt~~------~~   93 (302)
                      ||||||.||.++.++|++++.  +|+++.|..+.   .+...+.+.+          ...++.++.+|++++      ++
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~   80 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED   80 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence            799999999999999999976  99999997633   2222222221          146899999999975      34


Q ss_pred             HHHHHHHHHhhCCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCccccc
Q 022103           94 IEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSK  173 (302)
Q Consensus        94 ~~~~~~~~~~~~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~  173 (302)
                      .+.+.+       .+|+|||||+...-.   .   ..++..++|+.|+.++++.+...     ...+++++|| +...+.
T Consensus        81 ~~~L~~-------~v~~IiH~Aa~v~~~---~---~~~~~~~~NV~gt~~ll~la~~~-----~~~~~~~iST-a~v~~~  141 (249)
T PF07993_consen   81 YQELAE-------EVDVIIHCAASVNFN---A---PYSELRAVNVDGTRNLLRLAAQG-----KRKRFHYIST-AYVAGS  141 (249)
T ss_dssp             HHHHHH-------H--EEEE--SS-SBS-------S--EEHHHHHHHHHHHHHHHTSS-----S---EEEEEE-GGGTTS
T ss_pred             hhcccc-------ccceeeecchhhhhc---c---cchhhhhhHHHHHHHHHHHHHhc-----cCcceEEecc-ccccCC
Confidence            544444       579999999975321   1   23446889999999999988632     2359999999 322222


Q ss_pred             ccCcccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCc
Q 022103          174 VRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGF  253 (302)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~  253 (302)
                      .... ..    ++.+...            ....    ...+.....|..||...|.+++..+.+   .|+.+..+.||.
T Consensus       142 ~~~~-~~----~~~~~~~------------~~~~----~~~~~~~~gY~~SK~~aE~~l~~a~~~---~g~p~~I~Rp~~  197 (249)
T PF07993_consen  142 RPGT-IE----EKVYPEE------------EDDL----DPPQGFPNGYEQSKWVAERLLREAAQR---HGLPVTIYRPGI  197 (249)
T ss_dssp             -TTT-------SSS-HHH--------------EE----E--TTSEE-HHHHHHHHHHHHHHHHHH---H---EEEEEE-E
T ss_pred             CCCc-cc----ccccccc------------cccc----hhhccCCccHHHHHHHHHHHHHHHHhc---CCceEEEEecCc
Confidence            1110 00    0000000            0000    001122357999999999999999876   589999999999


Q ss_pred             ccCCCCC
Q 022103          254 TQTSMTQ  260 (302)
Q Consensus       254 v~T~~~~  260 (302)
                      |...-..
T Consensus       198 i~g~~~~  204 (249)
T PF07993_consen  198 IVGDSRT  204 (249)
T ss_dssp             EE-SSSS
T ss_pred             ccccCCC
Confidence            9874433

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=99.41  E-value=1.1e-11  Score=115.76  Aligned_cols=223  Identities=18%  Similarity=0.123  Sum_probs=152.1

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcC--CEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELG--LTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G--~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      .++.+++||||+|.+|++++.+|.+.+  .+|.+++..+..-....+.+.....++..+.+|+.+..++.+.+.      
T Consensus         2 ~~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~------   75 (361)
T KOG1430|consen    2 EKKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAFQ------   75 (361)
T ss_pred             CcCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhcc------
Confidence            467899999999999999999999998  789999888753222233332234578899999999998887777      


Q ss_pred             CCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccch
Q 022103          106 AALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILED  185 (302)
Q Consensus       106 g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~  185 (302)
                       .+ .++|+|....+.+   -..+.+..+++|+.|+.+++..+...     +..++|++||....++...-.+.   .+.
T Consensus        76 -~~-~Vvh~aa~~~~~~---~~~~~~~~~~vNV~gT~nvi~~c~~~-----~v~~lIYtSs~~Vvf~g~~~~n~---~E~  142 (361)
T KOG1430|consen   76 -GA-VVVHCAASPVPDF---VENDRDLAMRVNVNGTLNVIEACKEL-----GVKRLIYTSSAYVVFGGEPIING---DES  142 (361)
T ss_pred             -Cc-eEEEeccccCccc---cccchhhheeecchhHHHHHHHHHHh-----CCCEEEEecCceEEeCCeecccC---CCC
Confidence             45 5555555433332   22256778999999999988887664     68999999999988776541110   011


Q ss_pred             hhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCCCC-
Q 022103          186 EELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGS-  264 (302)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~~~-  264 (302)
                      .++.                         ......|+.||+-.|.+++..+-   ..+..-.++.|..|..|-.+..-. 
T Consensus       143 ~p~p-------------------------~~~~d~Y~~sKa~aE~~Vl~an~---~~~l~T~aLR~~~IYGpgd~~~~~~  194 (361)
T KOG1430|consen  143 LPYP-------------------------LKHIDPYGESKALAEKLVLEANG---SDDLYTCALRPPGIYGPGDKRLLPK  194 (361)
T ss_pred             CCCc-------------------------cccccccchHHHHHHHHHHHhcC---CCCeeEEEEccccccCCCCccccHH
Confidence            1111                         01124799999999999998774   356888899999998877554311 


Q ss_pred             -----------------------CCHH--HHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          265 -----------------------HTAD--EAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       265 -----------------------~~~~--~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                                             ...+  ..|+..+..........++|+.|...+..
T Consensus       195 i~~~~~~g~~~f~~g~~~~~~~~~~~~Nva~ahilA~~aL~~~~~~~~Gq~yfI~d~~  252 (361)
T KOG1430|consen  195 IVEALKNGGFLFKIGDGENLNDFTYGENVAWAHILAARALLDKSPSVNGQFYFITDDT  252 (361)
T ss_pred             HHHHHHccCceEEeeccccccceEEechhHHHHHHHHHHHHhcCCccCceEEEEeCCC
Confidence                                   1222  22333333333236666889888877654

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.39  E-value=4e-11  Score=121.54  Aligned_cols=211  Identities=20%  Similarity=0.141  Sum_probs=134.3

Q ss_pred             EEEEeCCCchHHHHHHHHHH--HcCCEEEEEecChhhHHHHHHHHhhCC-CceeEEEeeCCCHHH--HHHHHHHHHhhCC
Q 022103           32 IAIVTGANKGIGFALVKRLA--ELGLTVILTARDVERGQRAVESLSEKG-LPVNFFQLDVSDPSS--IEAFVSWFKSNFA  106 (302)
Q Consensus        32 ~vlItGas~gIG~ala~~l~--~~G~~V~l~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dlt~~~~--~~~~~~~~~~~~g  106 (302)
                      +++||||+|.||.++++.|.  ..|++|++++|+... ..........+ .++.++.+|++|.+.  .....+.+    .
T Consensus         2 ~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~-~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l----~   76 (657)
T PRK07201          2 RYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSL-SRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL----G   76 (657)
T ss_pred             eEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchH-HHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh----c
Confidence            69999999999999999999  579999999996532 22212111111 468899999998531  01112222    3


Q ss_pred             CccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchh
Q 022103          107 ALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDE  186 (302)
Q Consensus       107 ~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~  186 (302)
                      .+|+|||+||.....   .+   .+...++|+.++.++++.+...     +.+++|++||..........      .+++
T Consensus        77 ~~D~Vih~Aa~~~~~---~~---~~~~~~~nv~gt~~ll~~a~~~-----~~~~~v~~SS~~v~g~~~~~------~~e~  139 (657)
T PRK07201         77 DIDHVVHLAAIYDLT---AD---EEAQRAANVDGTRNVVELAERL-----QAATFHHVSSIAVAGDYEGV------FRED  139 (657)
T ss_pred             CCCEEEECceeecCC---CC---HHHHHHHHhHHHHHHHHHHHhc-----CCCeEEEEeccccccCccCc------cccc
Confidence            789999999975321   12   3456789999999998876542     35789999997664221110      0000


Q ss_pred             hhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCC-----
Q 022103          187 ELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG-----  261 (302)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~-----  261 (302)
                      .+.                     ..  +.....|+.+|...|.+++.      ..|+++..+.|+.+..+-...     
T Consensus       140 ~~~---------------------~~--~~~~~~Y~~sK~~~E~~~~~------~~g~~~~ilRp~~v~G~~~~g~~~~~  190 (657)
T PRK07201        140 DFD---------------------EG--QGLPTPYHRTKFEAEKLVRE------ECGLPWRVYRPAVVVGDSRTGEMDKI  190 (657)
T ss_pred             cch---------------------hh--cCCCCchHHHHHHHHHHHHH------cCCCcEEEEcCCeeeecCCCCccccC
Confidence            000                     00  11125699999999998863      257999999999886531100     


Q ss_pred             -----------------------------CCCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCc
Q 022103          262 -----------------------------QGSHTADEAADVGARLLLLHPQQLPTAKFYIGLDP  296 (302)
Q Consensus       262 -----------------------------~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  296 (302)
                                                   ......++++..+..++..   ....|..|...++
T Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vddva~ai~~~~~~---~~~~g~~~ni~~~  251 (657)
T PRK07201        191 DGPYYFFKVLAKLAKLPSWLPMVGPDGGRTNIVPVDYVADALDHLMHK---DGRDGQTFHLTDP  251 (657)
T ss_pred             CcHHHHHHHHHHhccCCcccccccCCCCeeeeeeHHHHHHHHHHHhcC---cCCCCCEEEeCCC
Confidence                                         0114468888888887652   2235666666554

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=99.38  E-value=3.2e-12  Score=117.19  Aligned_cols=176  Identities=23%  Similarity=0.256  Sum_probs=121.4

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCccEE
Q 022103           32 IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDIL  111 (302)
Q Consensus        32 ~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id~l  111 (302)
                      ++||||++|.||.++.+.|.+.|++|+.+.|.                     .+|++|.+.+.++++..     ++|+|
T Consensus         2 riLI~GasG~lG~~l~~~l~~~~~~v~~~~r~---------------------~~dl~d~~~~~~~~~~~-----~pd~V   55 (286)
T PF04321_consen    2 RILITGASGFLGSALARALKERGYEVIATSRS---------------------DLDLTDPEAVAKLLEAF-----KPDVV   55 (286)
T ss_dssp             EEEEETTTSHHHHHHHHHHTTTSEEEEEESTT---------------------CS-TTSHHHHHHHHHHH-------SEE
T ss_pred             EEEEECCCCHHHHHHHHHHhhCCCEEEEeCch---------------------hcCCCCHHHHHHHHHHh-----CCCeE
Confidence            58999999999999999999999999999777                     48999999999999887     68999


Q ss_pred             EEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhhcHH
Q 022103          112 VNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEE  191 (302)
Q Consensus       112 v~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~  191 (302)
                      ||+||.....   ...++.+..+.+|+.++.++++.+...      ..++|++||....-+....+              
T Consensus        56 in~aa~~~~~---~ce~~p~~a~~iN~~~~~~la~~~~~~------~~~li~~STd~VFdG~~~~~--------------  112 (286)
T PF04321_consen   56 INCAAYTNVD---ACEKNPEEAYAINVDATKNLAEACKER------GARLIHISTDYVFDGDKGGP--------------  112 (286)
T ss_dssp             EE------HH---HHHHSHHHHHHHHTHHHHHHHHHHHHC------T-EEEEEEEGGGS-SSTSSS--------------
T ss_pred             eccceeecHH---hhhhChhhhHHHhhHHHHHHHHHHHHc------CCcEEEeeccEEEcCCcccc--------------
Confidence            9999986432   233456778999999999999988653      57999999987664442221              


Q ss_pred             HHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC---------
Q 022103          192 QIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ---------  262 (302)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~---------  262 (302)
                                       +.+...|.+...|+.+|...|.+++....       +...+.++++..+-..++         
T Consensus       113 -----------------y~E~d~~~P~~~YG~~K~~~E~~v~~~~~-------~~~IlR~~~~~g~~~~~~~~~~~~~~~  168 (286)
T PF04321_consen  113 -----------------YTEDDPPNPLNVYGRSKLEGEQAVRAACP-------NALILRTSWVYGPSGRNFLRWLLRRLR  168 (286)
T ss_dssp             -----------------B-TTS----SSHHHHHHHHHHHHHHHH-S-------SEEEEEE-SEESSSSSSHHHHHHHHHH
T ss_pred             -----------------cccCCCCCCCCHHHHHHHHHHHHHHHhcC-------CEEEEecceecccCCCchhhhHHHHHh
Confidence                             22223344558899999999999887332       455667777766522221         


Q ss_pred             -------------CCCCHHHHHHHHHHHhhc
Q 022103          263 -------------GSHTADEAADVGARLLLL  280 (302)
Q Consensus       263 -------------~~~~~~~~a~~~~~l~~~  280 (302)
                                   .....+++|..+..++..
T Consensus       169 ~~~~i~~~~d~~~~p~~~~dlA~~i~~l~~~  199 (286)
T PF04321_consen  169 QGEPIKLFDDQYRSPTYVDDLARVILELIEK  199 (286)
T ss_dssp             CTSEEEEESSCEE--EEHHHHHHHHHHHHHH
T ss_pred             cCCeeEeeCCceeCCEEHHHHHHHHHHHHHh
Confidence                         125578999999998763

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=99.36  E-value=5.3e-11  Score=107.76  Aligned_cols=188  Identities=21%  Similarity=0.222  Sum_probs=138.2

Q ss_pred             EEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCccEEE
Q 022103           33 AIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDILV  112 (302)
Q Consensus        33 vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id~lv  112 (302)
                      +||||++|-+|.+|++.|. .+++|+.++|..                     +|++|.+.+.+++.+.     ++|+||
T Consensus         3 iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~---------------------~Ditd~~~v~~~i~~~-----~PDvVI   55 (281)
T COG1091           3 ILITGANGQLGTELRRALP-GEFEVIATDRAE---------------------LDITDPDAVLEVIRET-----RPDVVI   55 (281)
T ss_pred             EEEEcCCChHHHHHHHHhC-CCceEEeccCcc---------------------ccccChHHHHHHHHhh-----CCCEEE
Confidence            8999999999999999999 778999988875                     8999999999999987     899999


Q ss_pred             EcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhhcHHH
Q 022103          113 NNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQ  192 (302)
Q Consensus       113 ~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (302)
                      |+|+...-.   ....+.+..+.+|..++.++.+++...      ...+|++|+-...-|...                 
T Consensus        56 n~AAyt~vD---~aE~~~e~A~~vNa~~~~~lA~aa~~~------ga~lVhiSTDyVFDG~~~-----------------  109 (281)
T COG1091          56 NAAAYTAVD---KAESEPELAFAVNATGAENLARAAAEV------GARLVHISTDYVFDGEKG-----------------  109 (281)
T ss_pred             ECccccccc---cccCCHHHHHHhHHHHHHHHHHHHHHh------CCeEEEeecceEecCCCC-----------------
Confidence            999986543   233446778999999999999998664      688999999887655432                 


Q ss_pred             HHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC----------
Q 022103          193 IERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ----------  262 (302)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~----------  262 (302)
                                    ++|++.-.|.+...|+.||.+-|..++.....       ...|.-.++...-..++          
T Consensus       110 --------------~~Y~E~D~~~P~nvYG~sKl~GE~~v~~~~~~-------~~I~Rtswv~g~~g~nFv~tml~la~~  168 (281)
T COG1091         110 --------------GPYKETDTPNPLNVYGRSKLAGEEAVRAAGPR-------HLILRTSWVYGEYGNNFVKTMLRLAKE  168 (281)
T ss_pred             --------------CCCCCCCCCCChhhhhHHHHHHHHHHHHhCCC-------EEEEEeeeeecCCCCCHHHHHHHHhhc
Confidence                          23444445666689999999999999887632       12223333333222211          


Q ss_pred             ------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          263 ------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       263 ------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                                  .+...+++|..+..++.....   .|.+.+...+.
T Consensus       169 ~~~l~vv~Dq~gsPt~~~dlA~~i~~ll~~~~~---~~~yH~~~~g~  212 (281)
T COG1091         169 GKELKVVDDQYGSPTYTEDLADAILELLEKEKE---GGVYHLVNSGE  212 (281)
T ss_pred             CCceEEECCeeeCCccHHHHHHHHHHHHhcccc---CcEEEEeCCCc
Confidence                        137789999999998863222   23454444443

>PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function

Probab=99.32  E-value=8.1e-11  Score=107.48  Aligned_cols=184  Identities=22%  Similarity=0.286  Sum_probs=145.1

Q ss_pred             cCcEEEEeCC-CchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC-
Q 022103           29 KETIAIVTGA-NKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA-  106 (302)
Q Consensus        29 ~~k~vlItGa-s~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g-  106 (302)
                      +..+|+|.|. ...|++.+|..|-++|+-|+++..+.++.+....+.   ...+.....|..+..++...+.++.+.+. 
T Consensus         2 R~evVvI~Gs~~~PltR~la~DLeRRGFIV~v~~~~~ed~~~ve~e~---~~dI~~L~ld~~~~~~~~~~l~~f~~~L~~   78 (299)
T PF08643_consen    2 RKEVVVIAGSPHDPLTRSLALDLERRGFIVYVTVSSAEDEKYVESED---RPDIRPLWLDDSDPSSIHASLSRFASLLSR   78 (299)
T ss_pred             ceeEEEEECCCCCccHHHHHHHHhhCCeEEEEEeCCHHHHHHHHhcc---CCCCCCcccCCCCCcchHHHHHHHHHHhcC
Confidence            3568999996 799999999999999999999999987755544443   34688888888877777777776665433 


Q ss_pred             -------------CccEEEEcCCCCCC--CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCC-CCCcEEEec-CCCc
Q 022103          107 -------------ALDILVNNAGVSFN--DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSP-SKSRILNIS-SRLG  169 (302)
Q Consensus       107 -------------~id~lv~~aG~~~~--~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~-~~~~iv~vs-S~~~  169 (302)
                                   .+..|++......+  +++.++.+.|.+.++.|+..++.+++.++|+|+.+. .+.+||.++ |+..
T Consensus        79 p~~p~~~~~~h~l~L~svi~~Psl~yp~gPie~i~~s~~~~~ln~~ll~~~~~~q~lLPlL~~~~~~~~~iil~~Psi~s  158 (299)
T PF08643_consen   79 PHVPFPGAPPHHLQLKSVIFIPSLSYPTGPIETISPSSWADELNTRLLTPILTIQGLLPLLRSRSNQKSKIILFNPSISS  158 (299)
T ss_pred             CCCCCCCCCCceeEEEEEEEecCCCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEeCchhh
Confidence                         35556666554433  578899999999999999999999999999999832 356666655 4444


Q ss_pred             ccccccCcccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEe
Q 022103          170 TLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSY  249 (302)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v  249 (302)
                      ...                                          +++.+.-.....++.+|+.+|++|+.+.+|+|..|
T Consensus       159 sl~------------------------------------------~PfhspE~~~~~al~~~~~~LrrEl~~~~I~V~~i  196 (299)
T PF08643_consen  159 SLN------------------------------------------PPFHSPESIVSSALSSFFTSLRRELRPHNIDVTQI  196 (299)
T ss_pred             ccC------------------------------------------CCccCHHHHHHHHHHHHHHHHHHHhhhcCCceEEE
Confidence            332                                          45567788899999999999999999999999999


Q ss_pred             ecCcccCC
Q 022103          250 CPGFTQTS  257 (302)
Q Consensus       250 ~PG~v~T~  257 (302)
                      ..|.++-.
T Consensus       197 ~LG~l~i~  204 (299)
T PF08643_consen  197 KLGNLDIG  204 (299)
T ss_pred             Eeeeeccc
Confidence            99999765

One of the proteins P32792 from SWISSPROT has been localised to the mitochondria [].

>PLN02996 fatty acyl-CoA reductase

Probab=99.32  E-value=1.2e-10  Score=114.44  Aligned_cols=127  Identities=20%  Similarity=0.189  Sum_probs=89.4

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcC---CEEEEEecChhh---HHHHHHHH---------hh-C--------CCcee
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELG---LTVILTARDVER---GQRAVESL---------SE-K--------GLPVN   82 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G---~~V~l~~r~~~~---~~~~~~~l---------~~-~--------~~~~~   82 (302)
                      ..+||+|+||||+|.||..++..|++.+   -+|+++.|....   .+....++         .+ .        ..++.
T Consensus         8 ~~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~   87 (491)
T PLN02996          8 FLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVT   87 (491)
T ss_pred             HhCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEE
Confidence            3789999999999999999999999864   367888886421   11111111         00 0        14789


Q ss_pred             EEEeeCCC-------HHHHHHHHHHHHhhCCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcC
Q 022103           83 FFQLDVSD-------PSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRS  155 (302)
Q Consensus        83 ~~~~Dlt~-------~~~~~~~~~~~~~~~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~  155 (302)
                      ++.+|+++       .+.++++++       .+|+|||+|+.....      +..+..+.+|+.|+.++++.+...   .
T Consensus        88 ~i~GDl~~~~LGLs~~~~~~~l~~-------~vD~ViH~AA~v~~~------~~~~~~~~~Nv~gt~~ll~~a~~~---~  151 (491)
T PLN02996         88 PVPGDISYDDLGVKDSNLREEMWK-------EIDIVVNLAATTNFD------ERYDVALGINTLGALNVLNFAKKC---V  151 (491)
T ss_pred             EEecccCCcCCCCChHHHHHHHHh-------CCCEEEECccccCCc------CCHHHHHHHHHHHHHHHHHHHHhc---C
Confidence            99999983       344444444       589999999975421      245678999999999999887542   1


Q ss_pred             CCCCcEEEecCCCcc
Q 022103          156 PSKSRILNISSRLGT  170 (302)
Q Consensus       156 ~~~~~iv~vsS~~~~  170 (302)
                       ...++|++||....
T Consensus       152 -~~k~~V~vST~~vy  165 (491)
T PLN02996        152 -KVKMLLHVSTAYVC  165 (491)
T ss_pred             -CCCeEEEEeeeEEe
Confidence             24689999997654

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=99.31  E-value=4.8e-11  Score=106.58  Aligned_cols=188  Identities=19%  Similarity=0.137  Sum_probs=137.7

Q ss_pred             cccccccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHH
Q 022103           21 VSSTKWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSW  100 (302)
Q Consensus        21 ~~~~~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~  100 (302)
                      ..-..+.+.+++++||||+|.||.++++.|..+|+.|++++.-....++....+-. ......+..|+..+     ++. 
T Consensus        18 ~~~~~~p~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~~-~~~fel~~hdv~~p-----l~~-   90 (350)
T KOG1429|consen   18 LREQVKPSQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWIG-HPNFELIRHDVVEP-----LLK-   90 (350)
T ss_pred             hhhcccCCCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhcc-CcceeEEEeechhH-----HHH-
Confidence            34445678889999999999999999999999999999999877655544444322 23456666776654     444 


Q ss_pred             HHhhCCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccc
Q 022103          101 FKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIK  180 (302)
Q Consensus       101 ~~~~~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~  180 (302)
                            .+|-++|.|..+.+.-+.   .....++.+|++++++++..+.+.      .+|+++.|+...+-.....|   
T Consensus        91 ------evD~IyhLAapasp~~y~---~npvktIktN~igtln~lglakrv------~aR~l~aSTseVYgdp~~hp---  152 (350)
T KOG1429|consen   91 ------EVDQIYHLAAPASPPHYK---YNPVKTIKTNVIGTLNMLGLAKRV------GARFLLASTSEVYGDPLVHP---  152 (350)
T ss_pred             ------HhhhhhhhccCCCCcccc---cCccceeeecchhhHHHHHHHHHh------CceEEEeecccccCCcccCC---
Confidence                  468999999987653222   223567899999999998888654      47888888766543222222   


Q ss_pred             cccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCC
Q 022103          181 SILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMT  259 (302)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~  259 (302)
                                             ..+-.|.....-....+|...|...|.|+....++   .||.|....+..+..|..
T Consensus       153 -----------------------q~e~ywg~vnpigpr~cydegKr~aE~L~~~y~k~---~giE~rIaRifNtyGPrm  205 (350)
T KOG1429|consen  153 -----------------------QVETYWGNVNPIGPRSCYDEGKRVAETLCYAYHKQ---EGIEVRIARIFNTYGPRM  205 (350)
T ss_pred             -----------------------CccccccccCcCCchhhhhHHHHHHHHHHHHhhcc---cCcEEEEEeeecccCCcc
Confidence                                   23346777777777899999999999999999987   788888778777776653

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.31  E-value=5.2e-10  Score=111.82  Aligned_cols=126  Identities=13%  Similarity=0.137  Sum_probs=89.8

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCC---EEEEEecChhh--HHHHH-HHH---------hhC---------CCceeE
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGL---TVILTARDVER--GQRAV-ESL---------SEK---------GLPVNF   83 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~---~V~l~~r~~~~--~~~~~-~~l---------~~~---------~~~~~~   83 (302)
                      .++|+|+||||+|.||..+++.|++.+.   +|+++.|....  ..+.. +++         .+.         ..++.+
T Consensus       117 ~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~  196 (605)
T PLN02503        117 LRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVP  196 (605)
T ss_pred             hcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEE
Confidence            6899999999999999999999998753   67888885422  12221 121         111         236889


Q ss_pred             EEeeCCCH------HHHHHHHHHHHhhCCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCC
Q 022103           84 FQLDVSDP------SSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPS  157 (302)
Q Consensus        84 ~~~Dlt~~------~~~~~~~~~~~~~~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~  157 (302)
                      +.+|++++      +..+.+.+       .+|+|||+|+....      .+..+..+++|+.++.++++.+...    +.
T Consensus       197 v~GDl~d~~LGLs~~~~~~L~~-------~vDiVIH~AA~v~f------~~~~~~a~~vNV~GT~nLLelA~~~----~~  259 (605)
T PLN02503        197 VVGNVCESNLGLEPDLADEIAK-------EVDVIINSAANTTF------DERYDVAIDINTRGPCHLMSFAKKC----KK  259 (605)
T ss_pred             EEeeCCCcccCCCHHHHHHHHh-------cCCEEEECcccccc------ccCHHHHHHHHHHHHHHHHHHHHHc----CC
Confidence            99999986      33333333       58999999997531      1346778999999999999887653    12


Q ss_pred             CCcEEEecCCCcc
Q 022103          158 KSRILNISSRLGT  170 (302)
Q Consensus       158 ~~~iv~vsS~~~~  170 (302)
                      ..++|++||....
T Consensus       260 lk~fV~vSTayVy  272 (605)
T PLN02503        260 LKLFLQVSTAYVN  272 (605)
T ss_pred             CCeEEEccCceee
Confidence            3579999987654

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=99.28  E-value=1.3e-09  Score=90.18  Aligned_cols=209  Identities=12%  Similarity=0.044  Sum_probs=143.3

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC--C
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF--A  106 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~--g  106 (302)
                      +-.+|+|.||-|.+|.+++.+|-..++-|.-++-+..+..          ..-.++..|-+=-++-+.+.+++-+.+  .
T Consensus         2 sagrVivYGGkGALGSacv~~FkannywV~siDl~eNe~A----------d~sI~V~~~~swtEQe~~v~~~vg~sL~ge   71 (236)
T KOG4022|consen    2 SAGRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQA----------DSSILVDGNKSWTEQEQSVLEQVGSSLQGE   71 (236)
T ss_pred             CCceEEEEcCcchHhHHHHHHHHhcCeEEEEEeecccccc----------cceEEecCCcchhHHHHHHHHHHHHhhccc
Confidence            3468999999999999999999999999988877653311          122344444443455566666666544  3


Q ss_pred             CccEEEEcCCCCCCC--CCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccc
Q 022103          107 ALDILVNNAGVSFND--IYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILE  184 (302)
Q Consensus       107 ~id~lv~~aG~~~~~--~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~  184 (302)
                      ++|.++|.||.....  ....=....+.+++-.+.....-.+.+..+++.   .|-+-..+......+            
T Consensus        72 kvDav~CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~---GGLL~LtGAkaAl~g------------  136 (236)
T KOG4022|consen   72 KVDAVFCVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKP---GGLLQLTGAKAALGG------------  136 (236)
T ss_pred             ccceEEEeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCC---CceeeecccccccCC------------
Confidence            899999999876432  111122344567777777776666666666653   243333333333322            


Q ss_pred             hhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHc--cCCCcEEEEeecCcccCCCCCCC
Q 022103          185 DEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRY--EGEGISVNSYCPGFTQTSMTQGQ  262 (302)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~--~~~gI~V~~v~PG~v~T~~~~~~  262 (302)
                                                    .|++..|+.+|+|++.++++|+.+-  -+.|-.+.+|.|-..+|||.+.+
T Consensus       137 ------------------------------TPgMIGYGMAKaAVHqLt~SLaak~SGlP~gsaa~~ilPVTLDTPMNRKw  186 (236)
T KOG4022|consen  137 ------------------------------TPGMIGYGMAKAAVHQLTSSLAAKDSGLPDGSAALTILPVTLDTPMNRKW  186 (236)
T ss_pred             ------------------------------CCcccchhHHHHHHHHHHHHhcccccCCCCCceeEEEeeeeccCcccccc
Confidence                                          3456889999999999999999885  24577899999999999999988


Q ss_pred             CC-------CCHHHHHHHHHHHhhcCCCCCCCcceeec
Q 022103          263 GS-------HTADEAADVGARLLLLHPQQLPTAKFYIG  293 (302)
Q Consensus       263 ~~-------~~~~~~a~~~~~l~~~~~~~~~~G~~~~~  293 (302)
                      .+       .+.++++.....+..... .-.+|.++-.
T Consensus       187 MP~ADfssWTPL~fi~e~flkWtt~~~-RPssGsLlqi  223 (236)
T KOG4022|consen  187 MPNADFSSWTPLSFISEHFLKWTTETS-RPSSGSLLQI  223 (236)
T ss_pred             CCCCcccCcccHHHHHHHHHHHhccCC-CCCCCceEEE
Confidence            54       567889988888875333 3356666543

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.27  E-value=1.8e-10  Score=107.19  Aligned_cols=185  Identities=16%  Similarity=0.126  Sum_probs=125.4

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHc-CCEEEEEecChhh---HHHHHHHHh-------hCCCceeEEEeeCC------CHHH
Q 022103           31 TIAIVTGANKGIGFALVKRLAEL-GLTVILTARDVER---GQRAVESLS-------EKGLPVNFFQLDVS------DPSS   93 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~-G~~V~l~~r~~~~---~~~~~~~l~-------~~~~~~~~~~~Dlt------~~~~   93 (302)
                      +++++|||||.+|+.+.+.|..+ .++|++..|-.+.   .++..+.+.       ....++.++.+|++      +...
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~   80 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT   80 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence            57999999999999999999987 4699999886542   223333333       22468999999999      4455


Q ss_pred             HHHHHHHHHhhCCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCccccc
Q 022103           94 IEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSK  173 (302)
Q Consensus        94 ~~~~~~~~~~~~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~  173 (302)
                      .+++++       .+|.|+||++...-      .....+....|+.|+..+++.+.-.     +.+.+.+|||++.....
T Consensus        81 ~~~La~-------~vD~I~H~gA~Vn~------v~pYs~L~~~NVlGT~evlrLa~~g-----k~Kp~~yVSsisv~~~~  142 (382)
T COG3320          81 WQELAE-------NVDLIIHNAALVNH------VFPYSELRGANVLGTAEVLRLAATG-----KPKPLHYVSSISVGETE  142 (382)
T ss_pred             HHHHhh-------hcceEEecchhhcc------cCcHHHhcCcchHhHHHHHHHHhcC-----CCceeEEEeeeeecccc
Confidence            666665       78999999997531      1113445778999999998887542     34569999998876444


Q ss_pred             ccCcccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCc
Q 022103          174 VRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGF  253 (302)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~  253 (302)
                      ......    +.....             +.....     +-.....|+.||.+.|.+++....    +|++|.++.||+
T Consensus       143 ~~~~~~----~~~~~~-------------~~~~~~-----~~~~~~GY~~SKwvaE~Lvr~A~~----rGLpv~I~Rpg~  196 (382)
T COG3320         143 YYSNFT----VDFDEI-------------SPTRNV-----GQGLAGGYGRSKWVAEKLVREAGD----RGLPVTIFRPGY  196 (382)
T ss_pred             ccCCCc----cccccc-------------cccccc-----cCccCCCcchhHHHHHHHHHHHhh----cCCCeEEEecCe
Confidence            321110    000000             000000     012236799999999999998776    489999999999


Q ss_pred             ccCCCC
Q 022103          254 TQTSMT  259 (302)
Q Consensus       254 v~T~~~  259 (302)
                      |..+-.
T Consensus       197 I~gds~  202 (382)
T COG3320         197 ITGDSR  202 (382)
T ss_pred             eeccCc
Confidence            976554

>PLN02778 3,5-epimerase/4-reductase

Probab=99.27  E-value=2e-10  Score=105.94  Aligned_cols=152  Identities=18%  Similarity=0.095  Sum_probs=96.2

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCccE
Q 022103           31 TIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDI  110 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id~  110 (302)
                      +++|||||+|.||.+++++|.++|++|+...                        .|+.+.+.+...++..     ++|+
T Consensus        10 ~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~------------------------~~~~~~~~v~~~l~~~-----~~D~   60 (298)
T PLN02778         10 LKFLIYGKTGWIGGLLGKLCQEQGIDFHYGS------------------------GRLENRASLEADIDAV-----KPTH   60 (298)
T ss_pred             CeEEEECCCCHHHHHHHHHHHhCCCEEEEec------------------------CccCCHHHHHHHHHhc-----CCCE
Confidence            5799999999999999999999999987532                        2344555555444432     6899


Q ss_pred             EEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhhcH
Q 022103          111 LVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSE  190 (302)
Q Consensus       111 lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~  190 (302)
                      |||+||....+-.+...++....+++|+.++.++++++...     +. +++++||..........+.-           
T Consensus        61 ViH~Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~-----gv-~~v~~sS~~vy~~~~~~p~~-----------  123 (298)
T PLN02778         61 VFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRER-----GL-VLTNYATGCIFEYDDAHPLG-----------  123 (298)
T ss_pred             EEECCcccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHh-----CC-CEEEEecceEeCCCCCCCcc-----------
Confidence            99999976432111233456788999999999999998653     22 45555554322111000000           


Q ss_pred             HHHHHHHHHHHhhhccC-CCCCCCCC-cccccchhhHHHHHHHHHHHHHHccCCCcEE
Q 022103          191 EQIERFVGLFLQSVKDG-TWKSQGWP-EIWTDYAVSKLALNAYTMVLAKRYEGEGISV  246 (302)
Q Consensus       191 ~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V  246 (302)
                                     ++ +..+...| +....|+.||.+.|.+++.++..   .++|+
T Consensus       124 ---------------~~~~~~Ee~~p~~~~s~Yg~sK~~~E~~~~~y~~~---~~lr~  163 (298)
T PLN02778        124 ---------------SGIGFKEEDTPNFTGSFYSKTKAMVEELLKNYENV---CTLRV  163 (298)
T ss_pred             ---------------cCCCCCcCCCCCCCCCchHHHHHHHHHHHHHhhcc---EEeee
Confidence                           00 00001111 12367999999999999987643   45555

>PRK05865 hypothetical protein; Provisional

Probab=99.26  E-value=2.6e-10  Score=117.61  Aligned_cols=102  Identities=25%  Similarity=0.283  Sum_probs=82.4

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCccEE
Q 022103           32 IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDIL  111 (302)
Q Consensus        32 ~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id~l  111 (302)
                      +++||||+|+||++++++|+++|++|++++|+....      .   ...+.++.+|++|.+++.++++       .+|+|
T Consensus         2 kILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~------~---~~~v~~v~gDL~D~~~l~~al~-------~vD~V   65 (854)
T PRK05865          2 RIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS------W---PSSADFIAADIRDATAVESAMT-------GADVV   65 (854)
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh------c---ccCceEEEeeCCCHHHHHHHHh-------CCCEE
Confidence            599999999999999999999999999999975321      1   1257789999999999887776       58999


Q ss_pred             EEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecC
Q 022103          112 VNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISS  166 (302)
Q Consensus       112 v~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS  166 (302)
                      ||+|+....            .+++|+.++.++++++..    . +.++||++||
T Consensus        66 VHlAa~~~~------------~~~vNv~GT~nLLeAa~~----~-gvkr~V~iSS  103 (854)
T PRK05865         66 AHCAWVRGR------------NDHINIDGTANVLKAMAE----T-GTGRIVFTSS  103 (854)
T ss_pred             EECCCcccc------------hHHHHHHHHHHHHHHHHH----c-CCCeEEEECC
Confidence            999986321            367899999888777643    3 4578999987

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=99.20  E-value=1e-09  Score=99.56  Aligned_cols=202  Identities=15%  Similarity=0.066  Sum_probs=116.9

Q ss_pred             EEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCccEEE
Q 022103           33 AIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDILV  112 (302)
Q Consensus        33 vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id~lv  112 (302)
                      +|||||+|.||.++++.|+++|++|++++|+..+.+...        ...  ..|+.. ..+       ...+..+|+||
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--------~~~--~~~~~~-~~~-------~~~~~~~D~Vv   62 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTK--------WEG--YKPWAP-LAE-------SEALEGADAVI   62 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCccc--------cee--eecccc-cch-------hhhcCCCCEEE
Confidence            689999999999999999999999999999876533211        001  112222 111       12234799999


Q ss_pred             EcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCC-CcEEEecCCCcccccccCcccccccchhhhcHH
Q 022103          113 NNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSK-SRILNISSRLGTLSKVRNPNIKSILEDEELSEE  191 (302)
Q Consensus       113 ~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~-~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~  191 (302)
                      |+||..... ...+.+..+..+++|+.++.++++++...   . .. ..+|+.|+. +..+....               
T Consensus        63 h~a~~~~~~-~~~~~~~~~~~~~~n~~~~~~l~~a~~~~---~-~~~~~~i~~S~~-~~yg~~~~---------------  121 (292)
T TIGR01777        63 NLAGEPIAD-KRWTEERKQEIRDSRIDTTRALVEAIAAA---E-QKPKVFISASAV-GYYGTSED---------------  121 (292)
T ss_pred             ECCCCCccc-ccCCHHHHHHHHhcccHHHHHHHHHHHhc---C-CCceEEEEeeeE-EEeCCCCC---------------
Confidence            999975321 12344566778899999999998888543   1 11 234434432 22221110               


Q ss_pred             HHHHHHHHHHhhhccCCCCCCCC-CcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCC----------
Q 022103          192 QIERFVGLFLQSVKDGTWKSQGW-PEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ----------  260 (302)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~----------  260 (302)
                                      .+..... +.....|+..+...+...+.    +...++.+..+.|+.+..+-..          
T Consensus       122 ----------------~~~~E~~~~~~~~~~~~~~~~~e~~~~~----~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~  181 (292)
T TIGR01777       122 ----------------RVFTEEDSPAGDDFLAELCRDWEEAAQA----AEDLGTRVVLLRTGIVLGPKGGALAKMLPPFR  181 (292)
T ss_pred             ----------------CCcCcccCCCCCChHHHHHHHHHHHhhh----chhcCCceEEEeeeeEECCCcchhHHHHHHHh
Confidence                            0001111 11112233344444444332    2235799999999998765210          


Q ss_pred             -----C-------CCCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCc
Q 022103          261 -----G-------QGSHTADEAADVGARLLLLHPQQLPTAKFYIGLDP  296 (302)
Q Consensus       261 -----~-------~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  296 (302)
                           .       +.....++++..+..++..+.   ..|.+.+..+.
T Consensus       182 ~~~~~~~g~~~~~~~~i~v~Dva~~i~~~l~~~~---~~g~~~~~~~~  226 (292)
T TIGR01777       182 LGLGGPLGSGRQWFSWIHIEDLVQLILFALENAS---ISGPVNATAPE  226 (292)
T ss_pred             cCcccccCCCCcccccEeHHHHHHHHHHHhcCcc---cCCceEecCCC
Confidence                 0       122667999999999886322   24666665544

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.18  E-value=8e-11  Score=105.27  Aligned_cols=187  Identities=21%  Similarity=0.128  Sum_probs=135.6

Q ss_pred             CcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHH---HHHHHhhC-CCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           30 ETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQR---AVESLSEK-GLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        30 ~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~---~~~~l~~~-~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      +|++||||-+|--|..+|+.|+++|+.|+.+.|.......   ...++... +.++..+.+|++|...+.++++++    
T Consensus         2 ~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v----   77 (345)
T COG1089           2 GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEV----   77 (345)
T ss_pred             CceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhc----
Confidence            6899999999999999999999999999999887432211   11122222 346889999999999999999988    


Q ss_pred             CCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccch
Q 022103          106 AALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILED  185 (302)
Q Consensus       106 g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~  185 (302)
                       .+|-|.|.++.+.-+   .+.+.++.+.+++-+|+++|+.++.-+- .  ...|+..-||. -.++....         
T Consensus        78 -~PdEIYNLaAQS~V~---vSFe~P~~T~~~~~iGtlrlLEaiR~~~-~--~~~rfYQAStS-E~fG~v~~---------  140 (345)
T COG1089          78 -QPDEIYNLAAQSHVG---VSFEQPEYTADVDAIGTLRLLEAIRILG-E--KKTRFYQASTS-ELYGLVQE---------  140 (345)
T ss_pred             -Cchhheecccccccc---ccccCcceeeeechhHHHHHHHHHHHhC-C--cccEEEecccH-HhhcCccc---------
Confidence             789999999887543   5677778889999999999999886653 1  24566665553 23332110         


Q ss_pred             hhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHcc---CCCcEEEEeecCcccCCC
Q 022103          186 EELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYE---GEGISVNSYCPGFTQTSM  258 (302)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~---~~gI~V~~v~PG~v~T~~  258 (302)
                                           .+-.+..+..+.++|+++|....-.+..+++.|+   -.||-+|.=+|.-=.|-.
T Consensus       141 ---------------------~pq~E~TPFyPrSPYAvAKlYa~W~tvNYResYgl~AcnGILFNHESP~Rge~FV  195 (345)
T COG1089         141 ---------------------IPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGLFACNGILFNHESPLRGETFV  195 (345)
T ss_pred             ---------------------CccccCCCCCCCCHHHHHHHHHHheeeehHhhcCceeecceeecCCCCCCcccee
Confidence                                 0001222334569999999999999999998873   457888877776444433

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.17  E-value=1.1e-09  Score=99.86  Aligned_cols=107  Identities=12%  Similarity=0.116  Sum_probs=76.6

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC-ccE
Q 022103           32 IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA-LDI  110 (302)
Q Consensus        32 ~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~-id~  110 (302)
                      +++||||+|.||++++++|.++|++|.++.|+.++..         ...+....+|++|.+++.+.++.... +.. +|.
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~---------~~~~~~~~~d~~d~~~l~~a~~~~~~-~~g~~d~   70 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA---------GPNEKHVKFDWLDEDTWDNPFSSDDG-MEPEISA   70 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc---------CCCCccccccCCCHHHHHHHHhcccC-cCCceeE
Confidence            3899999999999999999999999999999986532         12355677899999999988865322 234 899


Q ss_pred             EEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCc
Q 022103          111 LVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLG  169 (302)
Q Consensus       111 lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~  169 (302)
                      ++++++....        ..+            ..+.+++.+++. +.++||++||...
T Consensus        71 v~~~~~~~~~--------~~~------------~~~~~i~aa~~~-gv~~~V~~Ss~~~  108 (285)
T TIGR03649        71 VYLVAPPIPD--------LAP------------PMIKFIDFARSK-GVRRFVLLSASII  108 (285)
T ss_pred             EEEeCCCCCC--------hhH------------HHHHHHHHHHHc-CCCEEEEeecccc
Confidence            9998874211        000            112334444444 5789999998544

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.14  E-value=6.3e-09  Score=113.94  Aligned_cols=215  Identities=14%  Similarity=0.092  Sum_probs=132.7

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcC----CEEEEEecChhhHH---HHHHHHhhC-------CCceeEEEeeCCCH---
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELG----LTVILTARDVERGQ---RAVESLSEK-------GLPVNFFQLDVSDP---   91 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G----~~V~l~~r~~~~~~---~~~~~l~~~-------~~~~~~~~~Dlt~~---   91 (302)
                      ..++|+|||++|.||.++++.|+++|    ++|+...|+....+   ...+.....       ..++.++.+|++++   
T Consensus       970 ~~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lg 1049 (1389)
T TIGR03443       970 TPITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFG 1049 (1389)
T ss_pred             CCceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCC
Confidence            35799999999999999999999987    78999999754322   222222111       13688999999854   


Q ss_pred             ---HHHHHHHHHHHhhCCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCC
Q 022103           92 ---SSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRL  168 (302)
Q Consensus        92 ---~~~~~~~~~~~~~~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~  168 (302)
                         +.+..+.       ..+|++||+|+.....   .+   ......+|+.|+.++++.+...     +..+++++||..
T Consensus      1050 l~~~~~~~l~-------~~~d~iiH~Aa~~~~~---~~---~~~~~~~nv~gt~~ll~~a~~~-----~~~~~v~vSS~~ 1111 (1389)
T TIGR03443      1050 LSDEKWSDLT-------NEVDVIIHNGALVHWV---YP---YSKLRDANVIGTINVLNLCAEG-----KAKQFSFVSSTS 1111 (1389)
T ss_pred             cCHHHHHHHH-------hcCCEEEECCcEecCc---cC---HHHHHHhHHHHHHHHHHHHHhC-----CCceEEEEeCee
Confidence               3333332       2689999999975321   12   2334567999999999887532     356899999986


Q ss_pred             cccccccCcccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEE
Q 022103          169 GTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNS  248 (302)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~  248 (302)
                      ......-.+.     . ++        ....-........+.....+.....|+.||.+.|.+++..+.    .|+.+..
T Consensus      1112 v~~~~~~~~~-----~-~~--------~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~----~g~~~~i 1173 (1389)
T TIGR03443      1112 ALDTEYYVNL-----S-DE--------LVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGK----RGLRGCI 1173 (1389)
T ss_pred             ecCcccccch-----h-hh--------hhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHh----CCCCEEE
Confidence            6522110000     0 00        000000000000000011112235699999999999987543    4899999


Q ss_pred             eecCcccCCCCCCC---------------------------CCCCHHHHHHHHHHHhh
Q 022103          249 YCPGFTQTSMTQGQ---------------------------GSHTADEAADVGARLLL  279 (302)
Q Consensus       249 v~PG~v~T~~~~~~---------------------------~~~~~~~~a~~~~~l~~  279 (302)
                      +.||.|..+.....                           ...+.++++..++.++.
T Consensus      1174 ~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~Vddva~ai~~~~~ 1231 (1389)
T TIGR03443      1174 VRPGYVTGDSKTGATNTDDFLLRMLKGCIQLGLIPNINNTVNMVPVDHVARVVVAAAL 1231 (1389)
T ss_pred             ECCCccccCCCcCCCCchhHHHHHHHHHHHhCCcCCCCCccccccHHHHHHHHHHHHh
Confidence            99999965532211                           12557889998888875

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.09  E-value=3.7e-09  Score=107.74  Aligned_cols=159  Identities=17%  Similarity=0.072  Sum_probs=104.3

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCc
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAAL  108 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~i  108 (302)
                      +..++|||||+|.||+++++.|.++|++|...                        ..|++|.+.+...++..     ++
T Consensus       379 ~~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~~------------------------~~~l~d~~~v~~~i~~~-----~p  429 (668)
T PLN02260        379 PSLKFLIYGRTGWIGGLLGKLCEKQGIAYEYG------------------------KGRLEDRSSLLADIRNV-----KP  429 (668)
T ss_pred             CCceEEEECCCchHHHHHHHHHHhCCCeEEee------------------------ccccccHHHHHHHHHhh-----CC
Confidence            34579999999999999999999999887311                        13578888887777654     68


Q ss_pred             cEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhh
Q 022103          109 DILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEEL  188 (302)
Q Consensus       109 d~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  188 (302)
                      |+|||+|+....+-.+...++.+..+.+|+.++.++++++...     + .+++++||..........+..         
T Consensus       430 d~Vih~Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~-----g-~~~v~~Ss~~v~~~~~~~~~~---------  494 (668)
T PLN02260        430 THVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCREN-----G-LLMMNFATGCIFEYDAKHPEG---------  494 (668)
T ss_pred             CEEEECCcccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHc-----C-CeEEEEcccceecCCcccccc---------
Confidence            9999999976432122334566788999999999999998653     2 356677664432111000000         


Q ss_pred             cHHHHHHHHHHHHhhhccCCCCCCCCC-cccccchhhHHHHHHHHHHHHHHccCCCcEEEEee
Q 022103          189 SEEQIERFVGLFLQSVKDGTWKSQGWP-EIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYC  250 (302)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~  250 (302)
                                      ...+..+...| +....|+.||.+.|.+++.+...   ..+|+..+.
T Consensus       495 ----------------~~~p~~E~~~~~~~~~~Yg~sK~~~E~~~~~~~~~---~~~r~~~~~  538 (668)
T PLN02260        495 ----------------SGIGFKEEDKPNFTGSFYSKTKAMVEELLREYDNV---CTLRVRMPI  538 (668)
T ss_pred             ----------------cCCCCCcCCCCCCCCChhhHHHHHHHHHHHhhhhh---eEEEEEEec
Confidence                            00001111112 12367999999999999887532   567776665

>PRK08309 short chain dehydrogenase; Provisional

Probab=99.08  E-value=1.2e-08  Score=87.07  Aligned_cols=173  Identities=15%  Similarity=0.101  Sum_probs=118.4

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCccEE
Q 022103           32 IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDIL  111 (302)
Q Consensus        32 ~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id~l  111 (302)
                      +++||||+ |+|.++++.|+++|++|++.+|+.++.+.....+.. ..++.++.+|++|.+++.++++++.++++.+|++
T Consensus         2 ~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~-~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~l   79 (177)
T PRK08309          2 HALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTT-PESITPLPLDYHDDDALKLAIKSTIEKNGPFDLA   79 (177)
T ss_pred             EEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhc-CCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeEE
Confidence            58999998 677789999999999999999998877766655543 4478889999999999999999999988999999


Q ss_pred             EEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhhcHH
Q 022103          112 VNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEE  191 (302)
Q Consensus       112 v~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~  191 (302)
                      |+.+-...+                     -++...+...=.+. ..-+++.+-...+..+                   
T Consensus        80 v~~vh~~~~---------------------~~~~~~~~~~gv~~-~~~~~~h~~gs~~~~~-------------------  118 (177)
T PRK08309         80 VAWIHSSAK---------------------DALSVVCRELDGSS-ETYRLFHVLGSAASDP-------------------  118 (177)
T ss_pred             EEeccccch---------------------hhHHHHHHHHccCC-CCceEEEEeCCcCCch-------------------
Confidence            987765321                     11222222110011 2236776643222100                   


Q ss_pred             HHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCCCCCCHHHHH
Q 022103          192 QIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTADEAA  271 (302)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~~~~~~~~~a  271 (302)
                                                               +..+...+...+...-|..|++..+-...  ..+=+|++
T Consensus       119 -----------------------------------------~~~~~~~~~~~~~~~~i~lgf~~~~~~~r--wlt~~ei~  155 (177)
T PRK08309        119 -----------------------------------------RIPSEKIGPARCSYRRVILGFVLEDTYSR--WLTHEEIS  155 (177)
T ss_pred             -----------------------------------------hhhhhhhhhcCCceEEEEEeEEEeCCccc--cCchHHHH
Confidence                                                     11112223345677888999997766553  45789999


Q ss_pred             HHHHHHhhcCCCCCCCcce
Q 022103          272 DVGARLLLLHPQQLPTAKF  290 (302)
Q Consensus       272 ~~~~~l~~~~~~~~~~G~~  290 (302)
                      +.++.-+..+....+-|.+
T Consensus       156 ~gv~~~~~~~~~~~~~g~~  174 (177)
T PRK08309        156 DGVIKAIESDADEHVVGTV  174 (177)
T ss_pred             HHHHHHHhcCCCeEEEEEe
Confidence            9999888766666555543

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=99.01  E-value=1.3e-09  Score=96.77  Aligned_cols=106  Identities=15%  Similarity=0.179  Sum_probs=79.3

Q ss_pred             EEEEeCC-CchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCccE
Q 022103           32 IAIVTGA-NKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDI  110 (302)
Q Consensus        32 ~vlItGa-s~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id~  110 (302)
                      +=.||.. +||||+++|++|+++|++|+++++...        +...    ....+|+++.+++.++++++.+.++++|+
T Consensus        16 VR~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~--------l~~~----~~~~~Dv~d~~s~~~l~~~v~~~~g~iDi   83 (227)
T TIGR02114        16 VRSITNHSTGHLGKIITETFLSAGHEVTLVTTKRA--------LKPE----PHPNLSIREIETTKDLLITLKELVQEHDI   83 (227)
T ss_pred             ceeecCCcccHHHHHHHHHHHHCCCEEEEEcChhh--------cccc----cCCcceeecHHHHHHHHHHHHHHcCCCCE
Confidence            3345555 689999999999999999999876311        1110    12458999999999999999999999999


Q ss_pred             EEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhh
Q 022103          111 LVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLF  152 (302)
Q Consensus       111 lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l  152 (302)
                      +|||||+... ++.+.+.++|++++   ..+.+++.+..-..+
T Consensus        84 LVnnAgv~d~~~~~~~s~e~~~~~~---~~~~~~~~~~~~~Ki  123 (227)
T TIGR02114        84 LIHSMAVSDYTPVYMTDLEQVQASD---NLNEFLSKQNHEAKI  123 (227)
T ss_pred             EEECCEeccccchhhCCHHHHhhhc---chhhhhccccccCCc
Confidence            9999997643 57778889988774   446666665433333

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>PLN00016 RNA-binding protein; Provisional

Probab=98.96  E-value=2.6e-08  Score=94.76  Aligned_cols=188  Identities=19%  Similarity=0.194  Sum_probs=114.4

Q ss_pred             CcEEEEe----CCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH-------HHHhhCCCceeEEEeeCCCHHHHHHHH
Q 022103           30 ETIAIVT----GANKGIGFALVKRLAELGLTVILTARDVERGQRAV-------ESLSEKGLPVNFFQLDVSDPSSIEAFV   98 (302)
Q Consensus        30 ~k~vlIt----Gas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~-------~~l~~~~~~~~~~~~Dlt~~~~~~~~~   98 (302)
                      .++|+||    ||+|.||.++++.|+++|++|+++.|+........       .++..  ..+.++.+|+.|   +..++
T Consensus        52 ~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~--~~v~~v~~D~~d---~~~~~  126 (378)
T PLN00016         52 KKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSS--AGVKTVWGDPAD---VKSKV  126 (378)
T ss_pred             cceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhh--cCceEEEecHHH---HHhhh
Confidence            4689999    99999999999999999999999999875432211       12221  247788888876   33333


Q ss_pred             HHHHhhCCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcc
Q 022103           99 SWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPN  178 (302)
Q Consensus        99 ~~~~~~~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~  178 (302)
                      .     ...+|+|||+++..        .           .+...+++    .+++. +.+++|++||...+......+.
T Consensus       127 ~-----~~~~d~Vi~~~~~~--------~-----------~~~~~ll~----aa~~~-gvkr~V~~SS~~vyg~~~~~p~  177 (378)
T PLN00016        127 A-----GAGFDVVYDNNGKD--------L-----------DEVEPVAD----WAKSP-GLKQFLFCSSAGVYKKSDEPPH  177 (378)
T ss_pred             c-----cCCccEEEeCCCCC--------H-----------HHHHHHHH----HHHHc-CCCEEEEEccHhhcCCCCCCCC
Confidence            1     13689999987631        1           12223333    33334 5679999999765422111100


Q ss_pred             cccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCC
Q 022103          179 IKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSM  258 (302)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~  258 (302)
                                                     .+. .+.  ..+. +|...|.+.+    +   .++.+..+.|+.+..+.
T Consensus       178 -------------------------------~E~-~~~--~p~~-sK~~~E~~l~----~---~~l~~~ilRp~~vyG~~  215 (378)
T PLN00016        178 -------------------------------VEG-DAV--KPKA-GHLEVEAYLQ----K---LGVNWTSFRPQYIYGPG  215 (378)
T ss_pred             -------------------------------CCC-CcC--CCcc-hHHHHHHHHH----H---cCCCeEEEeceeEECCC
Confidence                                           000 000  1122 7888887643    2   47899999998887653


Q ss_pred             CCCC-------------------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCc
Q 022103          259 TQGQ-------------------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDP  296 (302)
Q Consensus       259 ~~~~-------------------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  296 (302)
                      ....                         .....+++|..++.++..+.   ..|..|...++
T Consensus       216 ~~~~~~~~~~~~~~~~~~i~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~---~~~~~yni~~~  275 (378)
T PLN00016        216 NNKDCEEWFFDRLVRGRPVPIPGSGIQLTQLGHVKDLASMFALVVGNPK---AAGQIFNIVSD  275 (378)
T ss_pred             CCCchHHHHHHHHHcCCceeecCCCCeeeceecHHHHHHHHHHHhcCcc---ccCCEEEecCC
Confidence            2110                         12457999999988876322   23566655544

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=98.90  E-value=5.6e-09  Score=93.48  Aligned_cols=215  Identities=13%  Similarity=0.108  Sum_probs=145.8

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHc--CCEEEEEec-ChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           31 TIAIVTGANKGIGFALVKRLAEL--GLTVILTAR-DVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~--G~~V~l~~r-~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      +.++||||.|.||...+..++.+  .++.+.++. +--......++.. ..++.+++..|+.+...+.-++.+     ..
T Consensus         7 ~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~~-n~p~ykfv~~di~~~~~~~~~~~~-----~~   80 (331)
T KOG0747|consen    7 KNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPVR-NSPNYKFVEGDIADADLVLYLFET-----EE   80 (331)
T ss_pred             ceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhhc-cCCCceEeeccccchHHHHhhhcc-----Cc
Confidence            89999999999999999999987  455554433 1000011122221 135678999999999988777764     38


Q ss_pred             ccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhh
Q 022103          108 LDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEE  187 (302)
Q Consensus       108 id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~  187 (302)
                      +|.|+|-|....-.   ...-+.-..+..|++++..|++..+...    ...++|+||+.......-..           
T Consensus        81 id~vihfaa~t~vd---~s~~~~~~~~~nnil~t~~Lle~~~~sg----~i~~fvhvSTdeVYGds~~~-----------  142 (331)
T KOG0747|consen   81 IDTVIHFAAQTHVD---RSFGDSFEFTKNNILSTHVLLEAVRVSG----NIRRFVHVSTDEVYGDSDED-----------  142 (331)
T ss_pred             hhhhhhhHhhhhhh---hhcCchHHHhcCCchhhhhHHHHHHhcc----CeeEEEEecccceecCcccc-----------
Confidence            99999999876432   1112223457789999999999987754    35789999987654322110           


Q ss_pred             hcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC-----
Q 022103          188 LSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ-----  262 (302)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~-----  262 (302)
                                      +.++   +.+-|.+..+|+++|+|.|++.+++.+.   +|+-|.++.-+.|+.|-.-+.     
T Consensus       143 ----------------~~~~---E~s~~nPtnpyAasKaAaE~~v~Sy~~s---y~lpvv~~R~nnVYGP~q~~~klipk  200 (331)
T KOG0747|consen  143 ----------------AVVG---EASLLNPTNPYAASKAAAEMLVRSYGRS---YGLPVVTTRMNNVYGPNQYPEKLIPK  200 (331)
T ss_pred             ----------------cccc---ccccCCCCCchHHHHHHHHHHHHHHhhc---cCCcEEEEeccCccCCCcChHHHhHH
Confidence                            0110   2333555689999999999999999987   688888888888887763321     


Q ss_pred             ---------------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCC
Q 022103          263 ---------------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLD  295 (302)
Q Consensus       263 ---------------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~  295 (302)
                                           .....+++++++...+..  .  .-|.+|...+
T Consensus       201 Fi~l~~~~~~~~i~g~g~~~rs~l~veD~~ea~~~v~~K--g--~~geIYNIgt  250 (331)
T KOG0747|consen  201 FIKLAMRGKEYPIHGDGLQTRSYLYVEDVSEAFKAVLEK--G--ELGEIYNIGT  250 (331)
T ss_pred             HHHHHHhCCCcceecCcccceeeEeHHHHHHHHHHHHhc--C--CccceeeccC
Confidence                                 115568888877777652  2  2466766543

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.88  E-value=4.5e-08  Score=95.12  Aligned_cols=155  Identities=14%  Similarity=0.023  Sum_probs=109.0

Q ss_pred             EeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCccEEEEc
Q 022103           35 VTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDILVNN  114 (302)
Q Consensus        35 ItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id~lv~~  114 (302)
                      |+||++|+|.++++.|...|++|+...+...+..                   ..              ...+++.+++-
T Consensus        43 l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~~-------------------~~--------------~~~~~~~~~~d   89 (450)
T PRK08261         43 LVGGAGRLAEALAALLAGLGYDVVANNDGGLTWA-------------------AG--------------WGDRFGALVFD   89 (450)
T ss_pred             EEccCchhHHHHHHHHhhCCCeeeecCccccccc-------------------cC--------------cCCcccEEEEE
Confidence            7888899999999999999999998776653110                   00              00244444433


Q ss_pred             CCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhhcHHHHH
Q 022103          115 AGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIE  194 (302)
Q Consensus       115 aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (302)
                      +...      .+.++        +.+.+.+++.+++.|.+   .++||+++|..+...                      
T Consensus        90 ~~~~------~~~~~--------l~~~~~~~~~~l~~l~~---~griv~i~s~~~~~~----------------------  130 (450)
T PRK08261         90 ATGI------TDPAD--------LKALYEFFHPVLRSLAP---CGRVVVLGRPPEAAA----------------------  130 (450)
T ss_pred             CCCC------CCHHH--------HHHHHHHHHHHHHhccC---CCEEEEEccccccCC----------------------
Confidence            2211      11222        22444567777777753   489999998765421                      


Q ss_pred             HHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCCCCCCHHHHHHHH
Q 022103          195 RFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTADEAADVG  274 (302)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~~~~~~~~~a~~~  274 (302)
                                             ...|+++|+++.+++++++.|+ +++|+++.|.|+.           ..+++++..+
T Consensus       131 -----------------------~~~~~~akaal~gl~rsla~E~-~~gi~v~~i~~~~-----------~~~~~~~~~~  175 (450)
T PRK08261        131 -----------------------DPAAAAAQRALEGFTRSLGKEL-RRGATAQLVYVAP-----------GAEAGLESTL  175 (450)
T ss_pred             -----------------------chHHHHHHHHHHHHHHHHHHHh-hcCCEEEEEecCC-----------CCHHHHHHHH
Confidence                                   1349999999999999999999 7799999999985           3588888888


Q ss_pred             HHHhhcCCCCCCCcceeecCCcc
Q 022103          275 ARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       275 ~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                      .+++. +...+.+|+.+..++..
T Consensus       176 ~~l~s-~~~a~~~g~~i~~~~~~  197 (450)
T PRK08261        176 RFFLS-PRSAYVSGQVVRVGAAD  197 (450)
T ss_pred             HHhcC-CccCCccCcEEEecCCc
Confidence            88876 56677888888776543

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=98.77  E-value=9.8e-08  Score=84.41  Aligned_cols=185  Identities=20%  Similarity=0.216  Sum_probs=115.2

Q ss_pred             EEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCccEEE
Q 022103           33 AIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDILV  112 (302)
Q Consensus        33 vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id~lv  112 (302)
                      |+|+||+|.+|+.+++.|.+.+++|.++.|+..  .+..++++..|  +.++.+|+.|.+++.++++       .+|.++
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~--~~~~~~l~~~g--~~vv~~d~~~~~~l~~al~-------g~d~v~   69 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPS--SDRAQQLQALG--AEVVEADYDDPESLVAALK-------GVDAVF   69 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSH--HHHHHHHHHTT--TEEEES-TT-HHHHHHHHT-------TCSEEE
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccc--hhhhhhhhccc--ceEeecccCCHHHHHHHHc-------CCceEE
Confidence            689999999999999999999999999999983  23344555544  4667999999999988888       789999


Q ss_pred             EcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhhcHHH
Q 022103          113 NNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQ  192 (302)
Q Consensus       113 ~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (302)
                      ++.+...+       ..        +.....+++++..    . +..++|+ ||..........                
T Consensus        70 ~~~~~~~~-------~~--------~~~~~~li~Aa~~----a-gVk~~v~-ss~~~~~~~~~~----------------  112 (233)
T PF05368_consen   70 SVTPPSHP-------SE--------LEQQKNLIDAAKA----A-GVKHFVP-SSFGADYDESSG----------------  112 (233)
T ss_dssp             EESSCSCC-------CH--------HHHHHHHHHHHHH----H-T-SEEEE-SEESSGTTTTTT----------------
T ss_pred             eecCcchh-------hh--------hhhhhhHHHhhhc----c-ccceEEE-EEeccccccccc----------------
Confidence            98886431       11        1112234444433    2 4678875 443332211100                


Q ss_pred             HHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCC----------C
Q 022103          193 IERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG----------Q  262 (302)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~----------~  262 (302)
                                          ..|  ...+-..|..++.+.+..       ++....|.||+...+....          .
T Consensus       113 --------------------~~p--~~~~~~~k~~ie~~l~~~-------~i~~t~i~~g~f~e~~~~~~~~~~~~~~~~  163 (233)
T PF05368_consen  113 --------------------SEP--EIPHFDQKAEIEEYLRES-------GIPYTIIRPGFFMENLLPPFAPVVDIKKSK  163 (233)
T ss_dssp             --------------------STT--HHHHHHHHHHHHHHHHHC-------TSEBEEEEE-EEHHHHHTTTHHTTCSCCTS
T ss_pred             --------------------ccc--cchhhhhhhhhhhhhhhc-------cccceeccccchhhhhhhhhcccccccccc
Confidence                                000  122334566666555433       7888999999764432110          0


Q ss_pred             -------------CCC-CHHHHHHHHHHHhhcCCCCCCCcceeecCC
Q 022103          263 -------------GSH-TADEAADVGARLLLLHPQQLPTAKFYIGLD  295 (302)
Q Consensus       263 -------------~~~-~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~  295 (302)
                                   ... +.++++..++.++.. +.....|+++...+
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~Dvg~~va~il~~-p~~~~~~~~~~~~~  209 (233)
T PF05368_consen  164 DVVTLPGPGNQKAVPVTDTRDVGRAVAAILLD-PEKHNNGKTIFLAG  209 (233)
T ss_dssp             SEEEEETTSTSEEEEEEHHHHHHHHHHHHHHS-GGGTTEEEEEEEGG
T ss_pred             eEEEEccCCCccccccccHHHHHHHHHHHHcC-hHHhcCCEEEEeCC
Confidence                         013 779999999999974 55544677766654

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=98.74  E-value=1.2e-07  Score=84.89  Aligned_cols=186  Identities=19%  Similarity=0.183  Sum_probs=110.1

Q ss_pred             EEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCccEEE
Q 022103           33 AIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDILV  112 (302)
Q Consensus        33 vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id~lv  112 (302)
                      ++||||+|.||++++.+|.+.|++|+++.|+..+......      ..       +...+.+....+      ..+|+||
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~~------~~-------v~~~~~~~~~~~------~~~DavI   61 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNLH------PN-------VTLWEGLADALT------LGIDAVI   61 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhcC------cc-------ccccchhhhccc------CCCCEEE
Confidence            5899999999999999999999999999999866432111      00       111111211111      1699999


Q ss_pred             EcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhhcHHH
Q 022103          113 NNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQ  192 (302)
Q Consensus       113 ~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (302)
                      |.||-+-.. ...+.+.=+..+    .+.+..++.+...+.+.+.+.++..-+|..|+.+.....    ..+++      
T Consensus        62 NLAG~~I~~-rrWt~~~K~~i~----~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~----~~tE~------  126 (297)
T COG1090          62 NLAGEPIAE-RRWTEKQKEEIR----QSRINTTEKLVELIAASETKPKVLISASAVGYYGHSGDR----VVTEE------  126 (297)
T ss_pred             ECCCCcccc-ccCCHHHHHHHH----HHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCCce----eeecC------
Confidence            999965221 013433333333    456666777777777554566666667777776654321    11111      


Q ss_pred             HHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHH---ccCCCcEEEEeecCcccCCCCCCC-------
Q 022103          193 IERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKR---YEGEGISVNSYCPGFTQTSMTQGQ-------  262 (302)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e---~~~~gI~V~~v~PG~v~T~~~~~~-------  262 (302)
                                           .|+     +  .-.+..+++.+=.+   ....|+||..+.-|+|-.+--..+       
T Consensus       127 ---------------------~~~-----g--~~Fla~lc~~WE~~a~~a~~~gtRvvllRtGvVLs~~GGaL~~m~~~f  178 (297)
T COG1090         127 ---------------------SPP-----G--DDFLAQLCQDWEEEALQAQQLGTRVVLLRTGVVLSPDGGALGKMLPLF  178 (297)
T ss_pred             ---------------------CCC-----C--CChHHHHHHHHHHHHhhhhhcCceEEEEEEEEEecCCCcchhhhcchh
Confidence                                 011     1  12233333333222   234589999988888865321111       


Q ss_pred             ---------------CCCCHHHHHHHHHHHhhc
Q 022103          263 ---------------GSHTADEAADVGARLLLL  280 (302)
Q Consensus       263 ---------------~~~~~~~~a~~~~~l~~~  280 (302)
                                     ..+..|++...+.+++..
T Consensus       179 k~glGG~~GsGrQ~~SWIhieD~v~~I~fll~~  211 (297)
T COG1090         179 KLGLGGKLGSGRQWFSWIHIEDLVNAILFLLEN  211 (297)
T ss_pred             hhccCCccCCCCceeeeeeHHHHHHHHHHHHhC
Confidence                           126789999999999873

>PRK12320 hypothetical protein; Provisional

Probab=98.69  E-value=1.8e-07  Score=94.99  Aligned_cols=103  Identities=17%  Similarity=0.234  Sum_probs=78.0

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCccEE
Q 022103           32 IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDIL  111 (302)
Q Consensus        32 ~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id~l  111 (302)
                      +++||||+|.||.+++++|.++|++|++++|.....         ....+.++.+|+++.. +.+++.       .+|+|
T Consensus         2 kILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~---------~~~~ve~v~~Dl~d~~-l~~al~-------~~D~V   64 (699)
T PRK12320          2 QILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDA---------LDPRVDYVCASLRNPV-LQELAG-------EADAV   64 (699)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhc---------ccCCceEEEccCCCHH-HHHHhc-------CCCEE
Confidence            599999999999999999999999999999875321         1235788999999984 443332       58999


Q ss_pred             EEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCC
Q 022103          112 VNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRL  168 (302)
Q Consensus       112 v~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~  168 (302)
                      ||+|+....     .      ...+|+.++.++++++..    . + .++|++||..
T Consensus        65 IHLAa~~~~-----~------~~~vNv~Gt~nLleAA~~----~-G-vRiV~~SS~~  104 (699)
T PRK12320         65 IHLAPVDTS-----A------PGGVGITGLAHVANAAAR----A-G-ARLLFVSQAA  104 (699)
T ss_pred             EEcCccCcc-----c------hhhHHHHHHHHHHHHHHH----c-C-CeEEEEECCC
Confidence            999986321     1      124799999999888743    2 2 4799999864

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=98.68  E-value=1.1e-07  Score=87.45  Aligned_cols=84  Identities=24%  Similarity=0.208  Sum_probs=67.7

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCE-EEEEecCh---hhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHH
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLT-VILTARDV---ERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWF  101 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~-V~l~~r~~---~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~  101 (302)
                      ..+++|+++|+|+ ||+|++++..|++.|++ |++++|+.   ++.++..+++.+.+..+.+..+|+++.+++.+.++  
T Consensus       122 ~~~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~--  198 (289)
T PRK12548        122 VDVKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIA--  198 (289)
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhc--
Confidence            3467899999999 69999999999999986 99999997   67777777776655556677789888777765444  


Q ss_pred             HhhCCCccEEEEcCCC
Q 022103          102 KSNFAALDILVNNAGV  117 (302)
Q Consensus       102 ~~~~g~id~lv~~aG~  117 (302)
                           ..|+||||..+
T Consensus       199 -----~~DilINaTp~  209 (289)
T PRK12548        199 -----SSDILVNATLV  209 (289)
T ss_pred             -----cCCEEEEeCCC
Confidence                 56999999754

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=98.58  E-value=2.3e-07  Score=88.81  Aligned_cols=79  Identities=22%  Similarity=0.266  Sum_probs=62.8

Q ss_pred             cccCcEEEEeCC----------------CchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCC
Q 022103           27 WSKETIAIVTGA----------------NKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSD   90 (302)
Q Consensus        27 ~~~~k~vlItGa----------------s~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~   90 (302)
                      +++||+++||||                +|++|+++|++|+++|++|++++++.+ .+     .     ......+|+++
T Consensus       185 ~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~-----~-----~~~~~~~dv~~  253 (399)
T PRK05579        185 DLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LP-----T-----PAGVKRIDVES  253 (399)
T ss_pred             ccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-cc-----C-----CCCcEEEccCC
Confidence            478999999999                555999999999999999999998752 11     0     11235689999


Q ss_pred             HHHHHHHHHHHHhhCCCccEEEEcCCCCC
Q 022103           91 PSSIEAFVSWFKSNFAALDILVNNAGVSF  119 (302)
Q Consensus        91 ~~~~~~~~~~~~~~~g~id~lv~~aG~~~  119 (302)
                      .+++.+.+.   +.++.+|++|||||+..
T Consensus       254 ~~~~~~~v~---~~~~~~DilI~~Aav~d  279 (399)
T PRK05579        254 AQEMLDAVL---AALPQADIFIMAAAVAD  279 (399)
T ss_pred             HHHHHHHHH---HhcCCCCEEEEcccccc
Confidence            888777665   45788999999999864

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.55  E-value=8.9e-07  Score=76.45  Aligned_cols=85  Identities=26%  Similarity=0.289  Sum_probs=68.7

Q ss_pred             cccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhh
Q 022103           25 KWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSN  104 (302)
Q Consensus        25 ~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~  104 (302)
                      ..++++++++|+||+|++|+.+++.|++.|++|++++|+.++.+...+.+.+.. ......+|..+.+++.+.+.     
T Consensus        23 ~~~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~~~~~~~-----   96 (194)
T cd01078          23 GKDLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARF-GEGVGAVETSDDAARAAAIK-----   96 (194)
T ss_pred             CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhc-CCcEEEeeCCCHHHHHHHHh-----
Confidence            346789999999999999999999999999999999999988888877775321 34456678888888877665     


Q ss_pred             CCCccEEEEcCCC
Q 022103          105 FAALDILVNNAGV  117 (302)
Q Consensus       105 ~g~id~lv~~aG~  117 (302)
                        ..|+||++...
T Consensus        97 --~~diVi~at~~  107 (194)
T cd01078          97 --GADVVFAAGAA  107 (194)
T ss_pred             --cCCEEEECCCC
Confidence              56888886653

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=98.52  E-value=4e-06  Score=75.22  Aligned_cols=189  Identities=18%  Similarity=0.100  Sum_probs=124.4

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCccEE
Q 022103           32 IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDIL  111 (302)
Q Consensus        32 ~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id~l  111 (302)
                      .++||||+|.+|.+++++|.++|++|.+..|+.++.....       ..+.+...|+.++..+...++       .++.+
T Consensus         2 ~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~-------~~v~~~~~d~~~~~~l~~a~~-------G~~~~   67 (275)
T COG0702           2 KILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA-------GGVEVVLGDLRDPKSLVAGAK-------GVDGV   67 (275)
T ss_pred             eEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc-------CCcEEEEeccCCHhHHHHHhc-------cccEE
Confidence            5899999999999999999999999999999998876554       478899999999999988887       67888


Q ss_pred             EEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhhcHH
Q 022103          112 VNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEE  191 (302)
Q Consensus       112 v~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~  191 (302)
                      ++..+... +-   .     ..............+...     . ...+++.+|+..+....                  
T Consensus        68 ~~i~~~~~-~~---~-----~~~~~~~~~~~~~a~~a~-----~-~~~~~~~~s~~~~~~~~------------------  114 (275)
T COG0702          68 LLISGLLD-GS---D-----AFRAVQVTAVVRAAEAAG-----A-GVKHGVSLSVLGADAAS------------------  114 (275)
T ss_pred             EEEecccc-cc---c-----chhHHHHHHHHHHHHHhc-----C-CceEEEEeccCCCCCCC------------------
Confidence            88887653 20   0     112223333444444443     1 34667777776653211                  


Q ss_pred             HHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCc----ccC---------CC
Q 022103          192 QIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGF----TQT---------SM  258 (302)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~----v~T---------~~  258 (302)
                                                ...|..+|...+...++....+  ..++=+.+..+.    +..         ++
T Consensus       115 --------------------------~~~~~~~~~~~e~~l~~sg~~~--t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (275)
T COG0702         115 --------------------------PSALARAKAAVEAALRSSGIPY--TTLRRAAFYLGAGAAFIEAAEAAGLPVIPR  166 (275)
T ss_pred             --------------------------ccHHHHHHHHHHHHHHhcCCCe--EEEecCeeeeccchhHHHHHHhhCCceecC
Confidence                                      1568999999988887766553  112211111110    101         11


Q ss_pred             CC-CCCCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          259 TQ-GQGSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       259 ~~-~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                      .. .......++++..+...+..+.   ..+..|...+|..
T Consensus       167 ~~~~~~~i~~~d~a~~~~~~l~~~~---~~~~~~~l~g~~~  204 (275)
T COG0702         167 GIGRLSPIAVDDVAEALAAALDAPA---TAGRTYELAGPEA  204 (275)
T ss_pred             CCCceeeeEHHHHHHHHHHHhcCCc---ccCcEEEccCCce
Confidence            11 1234678999998888886333   5677887777743

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=98.49  E-value=1.9e-06  Score=77.53  Aligned_cols=126  Identities=23%  Similarity=0.290  Sum_probs=94.1

Q ss_pred             cccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhh
Q 022103           25 KWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSN  104 (302)
Q Consensus        25 ~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~  104 (302)
                      ..+.+|-++.|.||+|.+|+.++.+|++.|-+|++=.|..+.-....+-+.+- +++.++..|+.|+++++.+++     
T Consensus        56 RsS~sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvmGdL-GQvl~~~fd~~DedSIr~vvk-----  129 (391)
T KOG2865|consen   56 RSSVSGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVMGDL-GQVLFMKFDLRDEDSIRAVVK-----  129 (391)
T ss_pred             cccccceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccchhheeecccc-cceeeeccCCCCHHHHHHHHH-----
Confidence            45577889999999999999999999999999999888765444434444333 478999999999999999988     


Q ss_pred             CCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcc
Q 022103          105 FAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGT  170 (302)
Q Consensus       105 ~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~  170 (302)
                        .-+++||..|--++. -..+.      -++|+.+.-.+++.+    ++. +.-++|.+|+..+.
T Consensus       130 --~sNVVINLIGrd~eT-knf~f------~Dvn~~~aerlAric----ke~-GVerfIhvS~Lgan  181 (391)
T KOG2865|consen  130 --HSNVVINLIGRDYET-KNFSF------EDVNVHIAERLARIC----KEA-GVERFIHVSCLGAN  181 (391)
T ss_pred             --hCcEEEEeecccccc-CCccc------ccccchHHHHHHHHH----Hhh-Chhheeehhhcccc
Confidence              458999999975441 11222      245666666665544    333 67789999988754

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=98.39  E-value=1.9e-06  Score=89.23  Aligned_cols=165  Identities=17%  Similarity=0.206  Sum_probs=133.1

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCE-EEEEecChhhH---HHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHh
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLT-VILTARDVERG---QRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKS  103 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~-V~l~~r~~~~~---~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~  103 (302)
                      -+.|.++|+||-||.|+++|..|..+|++ +++.+|+--+-   ...++.-...|.++.+-.-|++..+..+.++++..+
T Consensus      1766 hpeksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~GVqV~vsT~nitt~~ga~~Li~~s~k 1845 (2376)
T KOG1202|consen 1766 HPEKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRRGVQVQVSTSNITTAEGARGLIEESNK 1845 (2376)
T ss_pred             CccceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhcCeEEEEecccchhhhhHHHHHHHhhh
Confidence            45789999999999999999999999986 88888875433   344555566677888888899999999999887754


Q ss_pred             hCCCccEEEEcCCCCCCC-CCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccc
Q 022103          104 NFAALDILVNNAGVSFND-IYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSI  182 (302)
Q Consensus       104 ~~g~id~lv~~aG~~~~~-~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~  182 (302)
                       ++.+-.++|.|...... +++.+++.++++-+..+.++.++=+.-..++..   -.-+|..||+..-.++..+      
T Consensus      1846 -l~~vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~---LdyFv~FSSvscGRGN~GQ------ 1915 (2376)
T KOG1202|consen 1846 -LGPVGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPE---LDYFVVFSSVSCGRGNAGQ------ 1915 (2376)
T ss_pred             -cccccchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhhhhhCcc---cceEEEEEeecccCCCCcc------
Confidence             47888999999877664 688999999999999999999987766666553   3678899998877776655      


Q ss_pred             cchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHH
Q 022103          183 LEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKR  238 (302)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e  238 (302)
                                                          .-|+-++.++|-++..-..+
T Consensus      1916 ------------------------------------tNYG~aNS~MERiceqRr~~ 1935 (2376)
T KOG1202|consen 1916 ------------------------------------TNYGLANSAMERICEQRRHE 1935 (2376)
T ss_pred             ------------------------------------cccchhhHHHHHHHHHhhhc
Confidence                                                44999999999999876554

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=98.37  E-value=1.2e-06  Score=77.34  Aligned_cols=184  Identities=19%  Similarity=0.135  Sum_probs=120.8

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHH-HHHHHHhh-----CCCceeEEEeeCCCHHHHHHHHHHHH
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQ-RAVESLSE-----KGLPVNFFQLDVSDPSSIEAFVSWFK  102 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~-~~~~~l~~-----~~~~~~~~~~Dlt~~~~~~~~~~~~~  102 (302)
                      ..|++||||.+|-=|..+|..|+.+|++|..+-|...... ..++++-.     .++....+.+|++|...+..+++.+ 
T Consensus        27 ~rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~i-  105 (376)
T KOG1372|consen   27 PRKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTI-  105 (376)
T ss_pred             cceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhcc-
Confidence            4569999999999999999999999999999887654332 23344422     2456789999999999999999988 


Q ss_pred             hhCCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccc
Q 022103          103 SNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSI  182 (302)
Q Consensus       103 ~~~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~  182 (302)
                          +++-+.|.|+.+.-.   .+.+-.+-+-+|...|++.++.++...-...  .-++---|+ +-..+...       
T Consensus       106 ----kPtEiYnLaAQSHVk---vSFdlpeYTAeVdavGtLRlLdAi~~c~l~~--~VrfYQAst-SElyGkv~-------  168 (376)
T KOG1372|consen  106 ----KPTEVYNLAAQSHVK---VSFDLPEYTAEVDAVGTLRLLDAIRACRLTE--KVRFYQAST-SELYGKVQ-------  168 (376)
T ss_pred             ----CchhhhhhhhhcceE---EEeecccceeeccchhhhhHHHHHHhcCccc--ceeEEeccc-Hhhccccc-------
Confidence                688899998876542   2333334446677889999998887643322  233333322 22222110       


Q ss_pred             cchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHc---cCCCcEEEEeecCc
Q 022103          183 LEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRY---EGEGISVNSYCPGF  253 (302)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~---~~~gI~V~~v~PG~  253 (302)
                                             +.+-.+..+.-+.++|+++|.+..=.+-.+++.|   +=.||-+|.=+|--
T Consensus       169 -----------------------e~PQsE~TPFyPRSPYa~aKmy~~WivvNyREAYnmfAcNGILFNHESPRR  219 (376)
T KOG1372|consen  169 -----------------------EIPQSETTPFYPRSPYAAAKMYGYWIVVNYREAYNMFACNGILFNHESPRR  219 (376)
T ss_pred             -----------------------CCCcccCCCCCCCChhHHhhhhheEEEEEhHHhhcceeeccEeecCCCCcc
Confidence                                   0000112223346899999987655555555544   34578788777753

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=98.35  E-value=2.4e-05  Score=75.63  Aligned_cols=203  Identities=19%  Similarity=0.247  Sum_probs=122.0

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcC---CEEEEEecChhh--HH---------HHHHHHhhC----CCceeEEEeeCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELG---LTVILTARDVER--GQ---------RAVESLSEK----GLPVNFFQLDVS   89 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G---~~V~l~~r~~~~--~~---------~~~~~l~~~----~~~~~~~~~Dlt   89 (302)
                      .++|+++||||+|++|+-+...|++.-   -++.+.-|....  .+         .+-+.+.+.    -.++..+.+|++
T Consensus        10 ~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~   89 (467)
T KOG1221|consen   10 YKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDIS   89 (467)
T ss_pred             hCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceecccccc
Confidence            679999999999999999999999863   257777664321  11         111222222    246788899998


Q ss_pred             CH------HHHHHHHHHHHhhCCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEE
Q 022103           90 DP------SSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILN  163 (302)
Q Consensus        90 ~~------~~~~~~~~~~~~~~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~  163 (302)
                      ++      .+++.+.+       .+|+++|+|+...      -.|..+..+.+|.+|+.++++.+....+    -..++.
T Consensus        90 ~~~LGis~~D~~~l~~-------eV~ivih~AAtvr------Fde~l~~al~iNt~Gt~~~l~lak~~~~----l~~~vh  152 (467)
T KOG1221|consen   90 EPDLGISESDLRTLAD-------EVNIVIHSAATVR------FDEPLDVALGINTRGTRNVLQLAKEMVK----LKALVH  152 (467)
T ss_pred             CcccCCChHHHHHHHh-------cCCEEEEeeeeec------cchhhhhhhhhhhHhHHHHHHHHHHhhh----hheEEE
Confidence            54      34443333       7899999999753      2245667899999999999988876532    467999


Q ss_pred             ecCCCccccccc---Cccccccc-chhh---hcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHH
Q 022103          164 ISSRLGTLSKVR---NPNIKSIL-EDEE---LSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLA  236 (302)
Q Consensus       164 vsS~~~~~~~~~---~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la  236 (302)
                      ||..........   .+...... +.+.   ......++.++.....-.      +.+|+   .|.-+|+-.|.+...-+
T Consensus       153 VSTAy~n~~~~~i~E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~------~~~PN---TYtfTKal~E~~i~~~~  223 (467)
T KOG1221|consen  153 VSTAYSNCNVGHIEEKPYPMPETCNPEKILKLDENLSDELLDQKAPKLL------GGWPN---TYTFTKALAEMVIQKEA  223 (467)
T ss_pred             eehhheecccccccccccCccccCCHHHHHhhhccchHHHHHHhhHHhc------CCCCC---ceeehHhhHHHHHHhhc
Confidence            998877622110   11110110 0110   111111112211111111      12333   48888888777776555


Q ss_pred             HHccCCCcEEEEeecCcccCCCCCC
Q 022103          237 KRYEGEGISVNSYCPGFTQTSMTQG  261 (302)
Q Consensus       237 ~e~~~~gI~V~~v~PG~v~T~~~~~  261 (302)
                           .++-+..|+|..|.+....+
T Consensus       224 -----~~lPivIiRPsiI~st~~EP  243 (467)
T KOG1221|consen  224 -----ENLPLVIIRPSIITSTYKEP  243 (467)
T ss_pred             -----cCCCeEEEcCCceeccccCC
Confidence                 35778888998887765443

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=98.30  E-value=3e-05  Score=73.86  Aligned_cols=134  Identities=21%  Similarity=0.203  Sum_probs=85.8

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      ...+-.+|+|+||+|++|+-+++.|.++|+.|.++.|+.++..+... +.........+..|.....+......+...  
T Consensus        75 ~~~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~-~~~~d~~~~~v~~~~~~~~d~~~~~~~~~~--  151 (411)
T KOG1203|consen   75 NSKKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLG-VFFVDLGLQNVEADVVTAIDILKKLVEAVP--  151 (411)
T ss_pred             CCCCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhc-ccccccccceeeeccccccchhhhhhhhcc--
Confidence            33556799999999999999999999999999999999988777766 221112344455555554443332222211  


Q ss_pred             CCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCccccc
Q 022103          106 AALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSK  173 (302)
Q Consensus       106 g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~  173 (302)
                      -...+++.++|.-...  +    +...-..|...|..++++++..    . +..|+++++|+.+...+
T Consensus       152 ~~~~~v~~~~ggrp~~--e----d~~~p~~VD~~g~knlvdA~~~----a-Gvk~~vlv~si~~~~~~  208 (411)
T KOG1203|consen  152 KGVVIVIKGAGGRPEE--E----DIVTPEKVDYEGTKNLVDACKK----A-GVKRVVLVGSIGGTKFN  208 (411)
T ss_pred             ccceeEEecccCCCCc--c----cCCCcceecHHHHHHHHHHHHH----h-CCceEEEEEeecCcccC
Confidence            1244666666543221  1    1222234566677777777732    2 67899999998887554

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=98.30  E-value=3e-06  Score=80.95  Aligned_cols=80  Identities=23%  Similarity=0.254  Sum_probs=62.3

Q ss_pred             cccCcEEEEeCC---------------Cch-HHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCC
Q 022103           27 WSKETIAIVTGA---------------NKG-IGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSD   90 (302)
Q Consensus        27 ~~~~k~vlItGa---------------s~g-IG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~   90 (302)
                      +++||+++||||               |+| +|.++|+.|..+|++|+++.+.....      .     .-....+|+++
T Consensus       182 ~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~------~-----~~~~~~~~v~~  250 (390)
T TIGR00521       182 DLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL------T-----PPGVKSIKVST  250 (390)
T ss_pred             ccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC------C-----CCCcEEEEecc
Confidence            488999999999               556 99999999999999999988765321      1     11235689999


Q ss_pred             HHHH-HHHHHHHHhhCCCccEEEEcCCCCCC
Q 022103           91 PSSI-EAFVSWFKSNFAALDILVNNAGVSFN  120 (302)
Q Consensus        91 ~~~~-~~~~~~~~~~~g~id~lv~~aG~~~~  120 (302)
                      .+++ +++++++   ++.+|++|+|||+...
T Consensus       251 ~~~~~~~~~~~~---~~~~D~~i~~Aavsd~  278 (390)
T TIGR00521       251 AEEMLEAALNEL---AKDFDIFISAAAVADF  278 (390)
T ss_pred             HHHHHHHHHHhh---cccCCEEEEccccccc
Confidence            9988 5565443   4689999999998743

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=98.28  E-value=7.7e-05  Score=73.46  Aligned_cols=208  Identities=22%  Similarity=0.199  Sum_probs=131.4

Q ss_pred             cccCcEEEEeCCC-chHHHHHHHHHHHcCCEEEEEecCh-hhHHHHHHHHhh----CCCceeEEEeeCCCHHHHHHHHHH
Q 022103           27 WSKETIAIVTGAN-KGIGFALVKRLAELGLTVILTARDV-ERGQRAVESLSE----KGLPVNFFQLDVSDPSSIEAFVSW  100 (302)
Q Consensus        27 ~~~~k~vlItGas-~gIG~ala~~l~~~G~~V~l~~r~~-~~~~~~~~~l~~----~~~~~~~~~~Dlt~~~~~~~~~~~  100 (302)
                      .-..+++||||++ +.||.+++..|++.|++|+++..+. ++..+..+.|-.    .|..+.++.+++.+..++..+++.
T Consensus       393 ~y~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdAlIew  472 (866)
T COG4982         393 TYGDKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDALIEW  472 (866)
T ss_pred             CcccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHHHHHH
Confidence            3567999999998 8899999999999999998875543 344445555532    356788999999999999999999


Q ss_pred             HHhhCC--------------CccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCC--CCCcEEE
Q 022103          101 FKSNFA--------------ALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSP--SKSRILN  163 (302)
Q Consensus       101 ~~~~~g--------------~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~--~~~~iv~  163 (302)
                      |-.+..              .++.++--|.+... .+.+...+ -+..+.+=+.+...++-.+.+.=....  .+-++|.
T Consensus       473 Ig~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v~G~l~~agsr-aE~~~rilLw~V~Rliggl~~~~s~r~v~~R~hVVL  551 (866)
T COG4982         473 IGDEQTETVGPQSIHIKLAWTPTLLFPFAAPRVSGELADAGSR-AEFAMRILLWNVLRLIGGLKKQGSSRGVDTRLHVVL  551 (866)
T ss_pred             hccccccccCCcceecccccCcceeeecccCCccCccccCCch-HHHHHHHHHHHHHHHHHHhhhhccccCcccceEEEe
Confidence            975432              46777777765433 23333221 234445545555555544444322221  1234444


Q ss_pred             ecCCCcccccccCcccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHc--cC
Q 022103          164 ISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRY--EG  241 (302)
Q Consensus       164 vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~--~~  241 (302)
                      -.|-.                                           ++..++=.+|+-+|++++.+.--+..|-  +.
T Consensus       552 PgSPN-------------------------------------------rG~FGgDGaYgEsK~aldav~~RW~sEs~Wa~  588 (866)
T COG4982         552 PGSPN-------------------------------------------RGMFGGDGAYGESKLALDAVVNRWHSESSWAA  588 (866)
T ss_pred             cCCCC-------------------------------------------CCccCCCcchhhHHHHHHHHHHHhhccchhhH
Confidence            43321                                           1112333679999999999988777663  22


Q ss_pred             CCcEEEEeecCccc-CCCCCCC------------CCCCHHHHHHHHHHHhh
Q 022103          242 EGISVNSYCPGFTQ-TSMTQGQ------------GSHTADEAADVGARLLL  279 (302)
Q Consensus       242 ~gI~V~~v~PG~v~-T~~~~~~------------~~~~~~~~a~~~~~l~~  279 (302)
                       -+.+..-.-|++. |.+....            ..-+.+|+|..++-|+.
T Consensus       589 -~vsl~~A~IGWtrGTGLMg~Ndiiv~aiEk~GV~tyS~~EmA~~LLgL~s  638 (866)
T COG4982         589 -RVSLAHALIGWTRGTGLMGHNDIIVAAIEKAGVRTYSTDEMAFNLLGLAS  638 (866)
T ss_pred             -HHHHhhhheeeeccccccCCcchhHHHHHHhCceecCHHHHHHHHHhhcc
Confidence             2444444557774 5544432            22578899988887764

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.27  E-value=5.1e-06  Score=73.86  Aligned_cols=99  Identities=13%  Similarity=0.206  Sum_probs=65.3

Q ss_pred             cEEEEeCCCc-hHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCcc
Q 022103           31 TIAIVTGANK-GIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALD  109 (302)
Q Consensus        31 k~vlItGas~-gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id  109 (302)
                      ++-.||..++ +||+++|++|+++|++|+++.|.....       ......+.++.++  ..+   ++.+.+.+.++.+|
T Consensus        16 ~VR~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~-------~~~~~~v~~i~v~--s~~---~m~~~l~~~~~~~D   83 (229)
T PRK06732         16 SVRGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVK-------PEPHPNLSIIEIE--NVD---DLLETLEPLVKDHD   83 (229)
T ss_pred             CceeecCccchHHHHHHHHHHHhCCCEEEEEECccccc-------CCCCCCeEEEEEe--cHH---HHHHHHHHHhcCCC
Confidence            3567776665 599999999999999999998764210       0011244555542  222   22333333445789


Q ss_pred             EEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHH
Q 022103          110 ILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGA  141 (302)
Q Consensus       110 ~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~  141 (302)
                      ++|||||.... +....+.+++.+++++|....
T Consensus        84 ivIh~AAvsd~~~~~~~~~~~~~~~~~v~~~~~  116 (229)
T PRK06732         84 VLIHSMAVSDYTPVYMTDLEEVSASDNLNEFLT  116 (229)
T ss_pred             EEEeCCccCCceehhhhhhhhhhhhhhhhhhhc
Confidence            99999998753 455677888999988865544

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=98.23  E-value=0.00014  Score=61.77  Aligned_cols=181  Identities=14%  Similarity=0.143  Sum_probs=118.6

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCccEE
Q 022103           32 IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDIL  111 (302)
Q Consensus        32 ~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id~l  111 (302)
                      .+.|.||+|-+|..+++...++|+.|+++.|+..+....        ..+.+.+.|+.|++++.+.+.       ..|+|
T Consensus         2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~--------~~~~i~q~Difd~~~~a~~l~-------g~DaV   66 (211)
T COG2910           2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR--------QGVTILQKDIFDLTSLASDLA-------GHDAV   66 (211)
T ss_pred             eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc--------ccceeecccccChhhhHhhhc-------CCceE
Confidence            477899999999999999999999999999999876532        256788999999998866665       68999


Q ss_pred             EEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhhcHH
Q 022103          112 VNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEE  191 (302)
Q Consensus       112 v~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~  191 (302)
                      |..-|...+.-.+       ...+        -.+.+...++.. ...|++.|+...+..-.+..    .+.+-+.+.  
T Consensus        67 IsA~~~~~~~~~~-------~~~k--------~~~~li~~l~~a-gv~RllVVGGAGSL~id~g~----rLvD~p~fP--  124 (211)
T COG2910          67 ISAFGAGASDNDE-------LHSK--------SIEALIEALKGA-GVPRLLVVGGAGSLEIDEGT----RLVDTPDFP--  124 (211)
T ss_pred             EEeccCCCCChhH-------HHHH--------HHHHHHHHHhhc-CCeeEEEEcCccceEEcCCc----eeecCCCCc--
Confidence            9988876432011       1111        144455556655 67899999887766544431    112211111  


Q ss_pred             HHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC---------
Q 022103          192 QIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ---------  262 (302)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~---------  262 (302)
                                                 ..|-..-.+..-+...|..+   .++...-|+|..+-.|.-+--         
T Consensus       125 ---------------------------~ey~~~A~~~ae~L~~Lr~~---~~l~WTfvSPaa~f~PGerTg~yrlggD~l  174 (211)
T COG2910         125 ---------------------------AEYKPEALAQAEFLDSLRAE---KSLDWTFVSPAAFFEPGERTGNYRLGGDQL  174 (211)
T ss_pred             ---------------------------hhHHHHHHHHHHHHHHHhhc---cCcceEEeCcHHhcCCccccCceEeccceE
Confidence                                       23444434444445566655   458889999987765532211         


Q ss_pred             -------CCCCHHHHHHHHHHHhh
Q 022103          263 -------GSHTADEAADVGARLLL  279 (302)
Q Consensus       263 -------~~~~~~~~a~~~~~l~~  279 (302)
                             ..++.++.|-.++--+.
T Consensus       175 l~n~~G~SrIS~aDYAiA~lDe~E  198 (211)
T COG2910         175 LVNAKGESRISYADYAIAVLDELE  198 (211)
T ss_pred             EEcCCCceeeeHHHHHHHHHHHHh
Confidence                   12667777777666665

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.10  E-value=2.5e-05  Score=74.23  Aligned_cols=77  Identities=27%  Similarity=0.425  Sum_probs=67.2

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHcC-CEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCcc
Q 022103           31 TIAIVTGANKGIGFALVKRLAELG-LTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALD  109 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~G-~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id  109 (302)
                      +.+||.|+ |+||+.+|..|+++| .+|++.+|+.++++++......   ++.++.+|+.|.+.+.++++       ..|
T Consensus         2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~---~v~~~~vD~~d~~al~~li~-------~~d   70 (389)
T COG1748           2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGG---KVEALQVDAADVDALVALIK-------DFD   70 (389)
T ss_pred             CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccc---cceeEEecccChHHHHHHHh-------cCC
Confidence            56899999 999999999999999 8999999999998888776543   88999999999999988888       349


Q ss_pred             EEEEcCCCC
Q 022103          110 ILVNNAGVS  118 (302)
Q Consensus       110 ~lv~~aG~~  118 (302)
                      ++|+++...
T Consensus        71 ~VIn~~p~~   79 (389)
T COG1748          71 LVINAAPPF   79 (389)
T ss_pred             EEEEeCCch
Confidence            999998653

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=98.09  E-value=1.6e-05  Score=64.86  Aligned_cols=78  Identities=23%  Similarity=0.319  Sum_probs=59.7

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCE-EEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLT-VILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~-V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      ++++++++|.|+ ||.|++++..|++.|++ |.++.|+.++.++..+.+..  ..+.++.  +.+..   +...      
T Consensus         9 ~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~--~~~~~~~--~~~~~---~~~~------   74 (135)
T PF01488_consen    9 DLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGG--VNIEAIP--LEDLE---EALQ------   74 (135)
T ss_dssp             TGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTG--CSEEEEE--GGGHC---HHHH------
T ss_pred             CcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCc--cccceee--HHHHH---HHHh------
Confidence            689999999998 88999999999999986 99999999999999888832  2333333  33332   2233      


Q ss_pred             CCccEEEEcCCCCC
Q 022103          106 AALDILVNNAGVSF  119 (302)
Q Consensus       106 g~id~lv~~aG~~~  119 (302)
                       ..|++|++.+...
T Consensus        75 -~~DivI~aT~~~~   87 (135)
T PF01488_consen   75 -EADIVINATPSGM   87 (135)
T ss_dssp             -TESEEEE-SSTTS
T ss_pred             -hCCeEEEecCCCC
Confidence             6899999988653

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PRK09620 hypothetical protein; Provisional

Probab=97.98  E-value=1e-05  Score=71.87  Aligned_cols=83  Identities=16%  Similarity=0.198  Sum_probs=51.7

Q ss_pred             ccCcEEEEeCCC----------------chHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCH
Q 022103           28 SKETIAIVTGAN----------------KGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP   91 (302)
Q Consensus        28 ~~~k~vlItGas----------------~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~   91 (302)
                      ++||+||||+|.                |.||.++|++|.++|++|+++++.......   ... .+..+..+..|....
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~---~~~-~~~~~~~V~s~~d~~   76 (229)
T PRK09620          1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPN---DIN-NQLELHPFEGIIDLQ   76 (229)
T ss_pred             CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCc---ccC-CceeEEEEecHHHHH
Confidence            479999999986                999999999999999999988864321110   000 011222333322222


Q ss_pred             HHHHHHHHHHHhhCCCccEEEEcCCCCC
Q 022103           92 SSIEAFVSWFKSNFAALDILVNNAGVSF  119 (302)
Q Consensus        92 ~~~~~~~~~~~~~~g~id~lv~~aG~~~  119 (302)
                      +.+.+++.    . ..+|++||+|+...
T Consensus        77 ~~l~~~~~----~-~~~D~VIH~AAvsD   99 (229)
T PRK09620         77 DKMKSIIT----H-EKVDAVIMAAAGSD   99 (229)
T ss_pred             HHHHHHhc----c-cCCCEEEECccccc
Confidence            22322221    1 26899999999864

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=97.96  E-value=4.1e-05  Score=73.07  Aligned_cols=76  Identities=34%  Similarity=0.531  Sum_probs=60.9

Q ss_pred             EEEeCCCchHHHHHHHHHHHcC-C-EEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCccE
Q 022103           33 AIVTGANKGIGFALVKRLAELG-L-TVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDI  110 (302)
Q Consensus        33 vlItGas~gIG~ala~~l~~~G-~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id~  110 (302)
                      |+|.|+ |.+|+.+++.|++++ . +|++.+|+.++++...+++  .+.++....+|+.|.+++.++++       ..|+
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~l~~~~~-------~~dv   70 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKL--LGDRVEAVQVDVNDPESLAELLR-------GCDV   70 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT----TTTTEEEEE--TTTHHHHHHHHT-------TSSE
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhc--cccceeEEEEecCCHHHHHHHHh-------cCCE
Confidence            689999 999999999999996 4 8999999999988887765  34589999999999999888877       5599


Q ss_pred             EEEcCCCC
Q 022103          111 LVNNAGVS  118 (302)
Q Consensus       111 lv~~aG~~  118 (302)
                      ||+++|..
T Consensus        71 Vin~~gp~   78 (386)
T PF03435_consen   71 VINCAGPF   78 (386)
T ss_dssp             EEE-SSGG
T ss_pred             EEECCccc
Confidence            99999975

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.95  E-value=4.4e-05  Score=74.23  Aligned_cols=77  Identities=31%  Similarity=0.425  Sum_probs=60.5

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecCh-hhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDV-ERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~-~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      ++++|+++|+|+++ +|.++|+.|+++|++|++++++. +..++..+++.+.+  +.++..|..+.            ..
T Consensus         2 ~~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~------------~~   66 (450)
T PRK14106          2 ELKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGELG--IELVLGEYPEE------------FL   66 (450)
T ss_pred             CcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcC--CEEEeCCcchh------------Hh
Confidence            46889999999877 99999999999999999999985 45555556665433  56777787761            12


Q ss_pred             CCccEEEEcCCCC
Q 022103          106 AALDILVNNAGVS  118 (302)
Q Consensus       106 g~id~lv~~aG~~  118 (302)
                      +.+|+||+++|..
T Consensus        67 ~~~d~vv~~~g~~   79 (450)
T PRK14106         67 EGVDLVVVSPGVP   79 (450)
T ss_pred             hcCCEEEECCCCC
Confidence            4789999999974

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=97.95  E-value=3.2e-05  Score=71.67  Aligned_cols=81  Identities=20%  Similarity=0.255  Sum_probs=71.4

Q ss_pred             EEEEeCCCchHHHHHHHHHHH----cCCEEEEEecChhhHHHHHHHHhhCCC----ceeEEEeeCCCHHHHHHHHHHHHh
Q 022103           32 IAIVTGANKGIGFALVKRLAE----LGLTVILTARDVERGQRAVESLSEKGL----PVNFFQLDVSDPSSIEAFVSWFKS  103 (302)
Q Consensus        32 ~vlItGas~gIG~ala~~l~~----~G~~V~l~~r~~~~~~~~~~~l~~~~~----~~~~~~~Dlt~~~~~~~~~~~~~~  103 (302)
                      -++|.||+|..|..++..+.+    .|..+-+.+|+.+++++..+.+.+..+    +..++.+|.+|++++.++++++  
T Consensus         7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak~~--   84 (423)
T KOG2733|consen    7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAKQA--   84 (423)
T ss_pred             eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHhhh--
Confidence            589999999999999999999    688999999999999999999987652    3458899999999999999954  


Q ss_pred             hCCCccEEEEcCCCCC
Q 022103          104 NFAALDILVNNAGVSF  119 (302)
Q Consensus       104 ~~g~id~lv~~aG~~~  119 (302)
                           .+|+||+|...
T Consensus        85 -----~vivN~vGPyR   95 (423)
T KOG2733|consen   85 -----RVIVNCVGPYR   95 (423)
T ss_pred             -----EEEEeccccce
Confidence                 79999999753

>PTZ00325 malate dehydrogenase; Provisional

Probab=97.92  E-value=8.4e-05  Score=69.30  Aligned_cols=119  Identities=20%  Similarity=0.096  Sum_probs=78.3

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcC--CEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELG--LTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G--~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      ++-++++|+|++|.||..++..|+..+  .++++++++  +.+..+..+.+...  .....+.+|..++.+.++      
T Consensus         6 ~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~--~~~g~a~Dl~~~~~--~~~v~~~td~~~~~~~l~------   75 (321)
T PTZ00325          6 LKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIV--GAPGVAADLSHIDT--PAKVTGYADGELWEKALR------   75 (321)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecC--CCcccccchhhcCc--CceEEEecCCCchHHHhC------
Confidence            445689999999999999999999665  579999993  32322333333222  233456666444333333      


Q ss_pred             CCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCC
Q 022103          106 AALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSR  167 (302)
Q Consensus       106 g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~  167 (302)
                       ..|+||+++|....+     .+.+.+.+..|+...-.+.+++..+     ...++|+++|-
T Consensus        76 -gaDvVVitaG~~~~~-----~~tR~dll~~N~~i~~~i~~~i~~~-----~~~~iviv~SN  126 (321)
T PTZ00325         76 -GADLVLICAGVPRKP-----GMTRDDLFNTNAPIVRDLVAAVASS-----APKAIVGIVSN  126 (321)
T ss_pred             -CCCEEEECCCCCCCC-----CCCHHHHHHHHHHHHHHHHHHHHHH-----CCCeEEEEecC
Confidence             689999999985432     2346677888887777776666554     45677777763

>PLN00106 malate dehydrogenase

Probab=97.87  E-value=0.00011  Score=68.70  Aligned_cols=162  Identities=17%  Similarity=0.108  Sum_probs=96.6

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCC--EEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGL--TVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~--~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      ...++|+|+|++|.||..++..|+..+.  ++++++.+.  .+..+..+.+.....  ...++++.+++.+.++      
T Consensus        16 ~~~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~--~~g~a~Dl~~~~~~~--~i~~~~~~~d~~~~l~------   85 (323)
T PLN00106         16 APGFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIAN--TPGVAADVSHINTPA--QVRGFLGDDQLGDALK------   85 (323)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCC--CCeeEchhhhCCcCc--eEEEEeCCCCHHHHcC------
Confidence            4456899999999999999999997764  799999877  221122333222211  2234443433433333      


Q ss_pred             CCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecC-CCcccccccCcccccccc
Q 022103          106 AALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISS-RLGTLSKVRNPNIKSILE  184 (302)
Q Consensus       106 g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS-~~~~~~~~~~~~~~~~~~  184 (302)
                       ..|++|++||....+     -+.+.+.+..|+.....+.+.+..+     ...+|+++.| -.-...            
T Consensus        86 -~aDiVVitAG~~~~~-----g~~R~dll~~N~~i~~~i~~~i~~~-----~p~aivivvSNPvD~~~------------  142 (323)
T PLN00106         86 -GADLVIIPAGVPRKP-----GMTRDDLFNINAGIVKTLCEAVAKH-----CPNALVNIISNPVNSTV------------  142 (323)
T ss_pred             -CCCEEEEeCCCCCCC-----CCCHHHHHHHHHHHHHHHHHHHHHH-----CCCeEEEEeCCCccccH------------
Confidence             789999999986432     2346778888888766666666554     3444555544 221000            


Q ss_pred             hhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHcc
Q 022103          185 DEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYE  240 (302)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~  240 (302)
                                       +....-.|+ .+.++....|+.++.-.+.|-..+|+++.
T Consensus       143 -----------------~i~t~~~~~-~s~~p~~~viG~~~LDs~Rl~~~lA~~lg  180 (323)
T PLN00106        143 -----------------PIAAEVLKK-AGVYDPKKLFGVTTLDVVRANTFVAEKKG  180 (323)
T ss_pred             -----------------HHHHHHHHH-cCCCCcceEEEEecchHHHHHHHHHHHhC
Confidence                             000000001 12233346788888777788889998864

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=97.84  E-value=0.00022  Score=62.49  Aligned_cols=162  Identities=14%  Similarity=0.114  Sum_probs=95.8

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHcCC---EEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           31 TIAIVTGANKGIGFALVKRLAELGL---TVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~G~---~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      ++++|||++|-+|.++.+.+.+.|.   +.++.+..                     .+|+++.++.+++|+..     +
T Consensus         2 ~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~sk---------------------d~DLt~~a~t~~lF~~e-----k   55 (315)
T KOG1431|consen    2 KKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGSK---------------------DADLTNLADTRALFESE-----K   55 (315)
T ss_pred             ceEEEecCCchHHHHHHHHHHhcCCCCcceEEeccc---------------------cccccchHHHHHHHhcc-----C
Confidence            6799999999999999999999876   34443322                     28999999999999976     6


Q ss_pred             ccEEEEcCCCCCCCC--CCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccch
Q 022103          108 LDILVNNAGVSFNDI--YKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILED  185 (302)
Q Consensus       108 id~lv~~aG~~~~~~--~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~  185 (302)
                      +..+||.|+....-+  ...+.+-|    ..|+.-.=++++.+...     +..++++..|.. ++|.....        
T Consensus        56 PthVIhlAAmVGGlf~N~~ynldF~----r~Nl~indNVlhsa~e~-----gv~K~vsclStC-IfPdkt~y--------  117 (315)
T KOG1431|consen   56 PTHVIHLAAMVGGLFHNNTYNLDFI----RKNLQINDNVLHSAHEH-----GVKKVVSCLSTC-IFPDKTSY--------  117 (315)
T ss_pred             CceeeehHhhhcchhhcCCCchHHH----hhcceechhHHHHHHHh-----chhhhhhhccee-ecCCCCCC--------
Confidence            788999986544321  11233333    33333333444444443     344555555533 23332110        


Q ss_pred             hhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccC
Q 022103          186 EELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQT  256 (302)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T  256 (302)
                       ++           .-++...|+--     +.-..|+-+|..+.-..++++.++   |-...++.|-.+..
T Consensus       118 -PI-----------dEtmvh~gpph-----psN~gYsyAKr~idv~n~aY~~qh---g~~~tsviPtNvfG  168 (315)
T KOG1431|consen  118 -PI-----------DETMVHNGPPH-----PSNFGYSYAKRMIDVQNQAYRQQH---GRDYTSVIPTNVFG  168 (315)
T ss_pred             -CC-----------CHHHhccCCCC-----CCchHHHHHHHHHHHHHHHHHHHh---CCceeeeccccccC
Confidence             00           01122222211     112459999988888889998884   44555555554443

>PRK14982 acyl-ACP reductase; Provisional

Probab=97.84  E-value=0.0001  Score=69.13  Aligned_cols=75  Identities=28%  Similarity=0.280  Sum_probs=56.5

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHc-C-CEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHh
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAEL-G-LTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKS  103 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~-G-~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~  103 (302)
                      .++++|+++||||+|.||..+|++|+++ | .++++++|+.+++....+++..         .|+.   ++.+       
T Consensus       151 ~~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~---------~~i~---~l~~-------  211 (340)
T PRK14982        151 IDLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGG---------GKIL---SLEE-------  211 (340)
T ss_pred             cCcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhcc---------ccHH---hHHH-------
Confidence            3689999999999999999999999865 5 5899999998887776665431         1222   2222       


Q ss_pred             hCCCccEEEEcCCCCC
Q 022103          104 NFAALDILVNNAGVSF  119 (302)
Q Consensus       104 ~~g~id~lv~~aG~~~  119 (302)
                      .+...|+++++++...
T Consensus       212 ~l~~aDiVv~~ts~~~  227 (340)
T PRK14982        212 ALPEADIVVWVASMPK  227 (340)
T ss_pred             HHccCCEEEECCcCCc
Confidence            2246899999999754

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=97.70  E-value=0.00015  Score=61.33  Aligned_cols=153  Identities=18%  Similarity=0.110  Sum_probs=104.0

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCC--EEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHh
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGL--TVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKS  103 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~--~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~  103 (302)
                      +.++++.++|.||+|-.|..+.+++.+.+-  +|+++.|....-.       +.+..+.....|+...++...-+.    
T Consensus        14 f~mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~-------at~k~v~q~~vDf~Kl~~~a~~~q----   82 (238)
T KOG4039|consen   14 FRMQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDP-------ATDKVVAQVEVDFSKLSQLATNEQ----   82 (238)
T ss_pred             HhhhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCc-------cccceeeeEEechHHHHHHHhhhc----
Confidence            668889999999999999999999999973  6999998742111       112345566677776665543333    


Q ss_pred             hCCCccEEEEcCCCCCC-----CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcc
Q 022103          104 NFAALDILVNNAGVSFN-----DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPN  178 (302)
Q Consensus       104 ~~g~id~lv~~aG~~~~-----~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~  178 (302)
                         .+|+++|+-|....     .++..|-+-           .+.+++     +.+.++-..|+.+||..+.        
T Consensus        83 ---g~dV~FcaLgTTRgkaGadgfykvDhDy-----------vl~~A~-----~AKe~Gck~fvLvSS~GAd--------  135 (238)
T KOG4039|consen   83 ---GPDVLFCALGTTRGKAGADGFYKVDHDY-----------VLQLAQ-----AAKEKGCKTFVLVSSAGAD--------  135 (238)
T ss_pred             ---CCceEEEeecccccccccCceEeechHH-----------HHHHHH-----HHHhCCCeEEEEEeccCCC--------
Confidence               78999999887543     244444322           122222     2233366789999997764        


Q ss_pred             cccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCC
Q 022103          179 IKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSM  258 (302)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~  258 (302)
                                                          |.....|--.|.-+|.-+-.|-.+      ++..+.||++..+.
T Consensus       136 ------------------------------------~sSrFlY~k~KGEvE~~v~eL~F~------~~~i~RPG~ll~~R  173 (238)
T KOG4039|consen  136 ------------------------------------PSSRFLYMKMKGEVERDVIELDFK------HIIILRPGPLLGER  173 (238)
T ss_pred             ------------------------------------cccceeeeeccchhhhhhhhcccc------EEEEecCcceeccc
Confidence                                                222367999999999877666543      67888999996544

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.63  E-value=0.0004  Score=57.22  Aligned_cols=77  Identities=26%  Similarity=0.409  Sum_probs=57.6

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcC-CEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhh
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELG-LTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSN  104 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G-~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~  104 (302)
                      +..++++++|+|+ |++|.++++.|.+.| .+|.+++|+.++.++..+++....     +..+..+.+++          
T Consensus        15 ~~~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~-----~~~~~~~~~~~----------   78 (155)
T cd01065          15 IELKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELG-----IAIAYLDLEEL----------   78 (155)
T ss_pred             CCCCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcc-----cceeecchhhc----------
Confidence            3467889999998 899999999999996 789999999988887777664321     22334444332          


Q ss_pred             CCCccEEEEcCCCC
Q 022103          105 FAALDILVNNAGVS  118 (302)
Q Consensus       105 ~g~id~lv~~aG~~  118 (302)
                      ....|+||+++...
T Consensus        79 ~~~~Dvvi~~~~~~   92 (155)
T cd01065          79 LAEADLIINTTPVG   92 (155)
T ss_pred             cccCCEEEeCcCCC
Confidence            24789999999764

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=97.61  E-value=0.00018  Score=67.32  Aligned_cols=117  Identities=14%  Similarity=0.159  Sum_probs=67.4

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHcC-------CEEEEEecChh--hHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHH
Q 022103           31 TIAIVTGANKGIGFALVKRLAELG-------LTVILTARDVE--RGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWF  101 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~G-------~~V~l~~r~~~--~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~  101 (302)
                      -+++|||++|.||.+++..|+..+       .+|++++++..  +++.....+.+.   ..++..|+....++.+.    
T Consensus         3 ~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~---~~~~~~~~~~~~~~~~~----   75 (325)
T cd01336           3 IRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDC---AFPLLKSVVATTDPEEA----   75 (325)
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhc---cccccCCceecCCHHHH----
Confidence            358999999999999999999854       48999999653  122111111100   00112233322222222    


Q ss_pred             HhhCCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCC-CCCcEEEecC
Q 022103          102 KSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSP-SKSRILNISS  166 (302)
Q Consensus       102 ~~~~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~-~~~~iv~vsS  166 (302)
                         +...|+|||+||....+  ..+   ..+.+..|+.    +.+.+.+.+.+.. ..+.++.+|.
T Consensus        76 ---l~~aDiVI~tAG~~~~~--~~~---R~~l~~~N~~----i~~~i~~~i~~~~~~~~iiivvsN  129 (325)
T cd01336          76 ---FKDVDVAILVGAMPRKE--GME---RKDLLKANVK----IFKEQGEALDKYAKKNVKVLVVGN  129 (325)
T ss_pred             ---hCCCCEEEEeCCcCCCC--CCC---HHHHHHHHHH----HHHHHHHHHHHhCCCCeEEEEecC
Confidence               23789999999986432  123   3556666654    4455555555442 3466777664

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=97.51  E-value=0.00069  Score=61.60  Aligned_cols=76  Identities=20%  Similarity=0.390  Sum_probs=56.7

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      ..++|+++|+|+ ||+|++++..|++.|++|++++|+.++.++..+++...+ .+.....|     +.         ...
T Consensus       114 ~~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~-~~~~~~~~-----~~---------~~~  177 (270)
T TIGR00507       114 LRPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYG-EIQAFSMD-----EL---------PLH  177 (270)
T ss_pred             CccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcC-ceEEechh-----hh---------ccc
Confidence            356889999999 699999999999999999999999988888888775433 22222111     10         123


Q ss_pred             CccEEEEcCCCC
Q 022103          107 ALDILVNNAGVS  118 (302)
Q Consensus       107 ~id~lv~~aG~~  118 (302)
                      ..|+||++.+..
T Consensus       178 ~~DivInatp~g  189 (270)
T TIGR00507       178 RVDLIINATSAG  189 (270)
T ss_pred             CccEEEECCCCC
Confidence            689999999763

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=97.50  E-value=0.00036  Score=61.50  Aligned_cols=173  Identities=20%  Similarity=0.237  Sum_probs=105.8

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHc-CC-EEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHh
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAEL-GL-TVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKS  103 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~-G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~  103 (302)
                      ...+-+++||||+-|-+|..+|+.|-.. |- .|++.+--... +    ..-+.|   -++..|+-|...+++++-.   
T Consensus        40 ~~~~~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp-~----~V~~~G---PyIy~DILD~K~L~eIVVn---  108 (366)
T KOG2774|consen   40 QTQKAPRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPP-A----NVTDVG---PYIYLDILDQKSLEEIVVN---  108 (366)
T ss_pred             ccCCCCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCc-h----hhcccC---CchhhhhhccccHHHhhcc---
Confidence            4456789999999999999999999876 64 46664432111 1    111112   3566788888777665532   


Q ss_pred             hCCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCccccccc
Q 022103          104 NFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSIL  183 (302)
Q Consensus       104 ~~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~  183 (302)
                        .+||-++|-.+....    .-.+..-....||+.|..++++.+..+       +--+||-|.-|.++...+.+...  
T Consensus       109 --~RIdWL~HfSALLSA----vGE~NVpLA~~VNI~GvHNil~vAa~~-------kL~iFVPSTIGAFGPtSPRNPTP--  173 (366)
T KOG2774|consen  109 --KRIDWLVHFSALLSA----VGETNVPLALQVNIRGVHNILQVAAKH-------KLKVFVPSTIGAFGPTSPRNPTP--  173 (366)
T ss_pred             --cccceeeeHHHHHHH----hcccCCceeeeecchhhhHHHHHHHHc-------CeeEeecccccccCCCCCCCCCC--
Confidence              489999998754211    111222335788999999998877554       44456666555555433211110  


Q ss_pred             chhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEe-ecCcc
Q 022103          184 EDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSY-CPGFT  254 (302)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v-~PG~v  254 (302)
                         +                        ...-.+...|+.||--.|.+-..+-..   +|+++-++ -||.+
T Consensus       174 ---d------------------------ltIQRPRTIYGVSKVHAEL~GEy~~hr---Fg~dfr~~rfPg~i  215 (366)
T KOG2774|consen  174 ---D------------------------LTIQRPRTIYGVSKVHAELLGEYFNHR---FGVDFRSMRFPGII  215 (366)
T ss_pred             ---C------------------------eeeecCceeechhHHHHHHHHHHHHhh---cCccceecccCccc
Confidence               0                        001112478999999999988887766   56655444 24544

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=97.47  E-value=0.00044  Score=63.17  Aligned_cols=76  Identities=24%  Similarity=0.412  Sum_probs=56.1

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcC-CEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhh
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELG-LTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSN  104 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G-~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~  104 (302)
                      ..+++|+++|+|+ ||+|++++..|++.| .+|++++|+.++.+...+++.... .+.   .++    +.       .+.
T Consensus       119 ~~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~-~~~---~~~----~~-------~~~  182 (278)
T PRK00258        119 VDLKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALG-KAE---LDL----EL-------QEE  182 (278)
T ss_pred             CCCCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhcc-cee---ecc----cc-------hhc
Confidence            4678899999997 899999999999999 689999999998888877765321 111   111    01       111


Q ss_pred             CCCccEEEEcCCC
Q 022103          105 FAALDILVNNAGV  117 (302)
Q Consensus       105 ~g~id~lv~~aG~  117 (302)
                      ....|+||++...
T Consensus       183 ~~~~DivInaTp~  195 (278)
T PRK00258        183 LADFDLIINATSA  195 (278)
T ss_pred             cccCCEEEECCcC
Confidence            2468999999864

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=97.42  E-value=0.0021  Score=74.15  Aligned_cols=187  Identities=14%  Similarity=0.083  Sum_probs=116.8

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      .+.++.++|++.+++++.+++..|.++|+.|+.+.....    ..+.....+..+..+...-.+.+.+..+++.+....+
T Consensus      1752 ~~~~~~~~v~~d~~~~~~~L~~~L~~~G~~v~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1827 (2582)
T TIGR02813      1752 KQSGANALVIDDDGHNAGVLAEKLIAAGWQVAVVRSPWV----VSHSASPLASAIASVTLGTIDDTSIEAVIKDIEEKTA 1827 (2582)
T ss_pred             cccCceeEEEcCCcchHHHHHHHHHhCCCeEEEeecccc----ccccccccccccccccccccchHHHHHHHHhhhcccc
Confidence            345788999988999999999999999999887642211    0111111112333445555567778888888877778


Q ss_pred             CccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchh
Q 022103          107 ALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDE  186 (302)
Q Consensus       107 ~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~  186 (302)
                      .++.+||..+.........+.......-...+...|.+.|.+.+.+... ..+.++.|+...|.++........      
T Consensus      1828 ~~~g~i~l~~~~~~~~~~~~~~~~~~~~~~~l~~~f~~ak~~~~~l~~~-~~~~~~~vsr~~G~~g~~~~~~~~------ 1900 (2582)
T TIGR02813      1828 QIDGFIHLQPQHKSVADKVDAIELPEAAKQSLMLAFLFAKLLNVKLATN-ARASFVTVSRIDGGFGYSNGDADS------ 1900 (2582)
T ss_pred             ccceEEEeccccccccccccccccchhhHHHHHHHHHHHHhhchhhccC-CCeEEEEEEecCCccccCCccccc------
Confidence            8999999877542210001000111122234555677888877776654 567899999988877653321000      


Q ss_pred             hhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecC
Q 022103          187 ELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPG  252 (302)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG  252 (302)
                                           +|.     +  .--....+++.+|+|+++.||...-+|...+.|.
T Consensus      1901 ---------------------~~~-----~--~~~~~~~a~l~Gl~Ktl~~E~P~~~~r~vDl~~~ 1938 (2582)
T TIGR02813      1901 ---------------------GTQ-----Q--VKAELNQAALAGLTKTLNHEWNAVFCRALDLAPK 1938 (2582)
T ss_pred             ---------------------ccc-----c--cccchhhhhHHHHHHhHHHHCCCCeEEEEeCCCC
Confidence                                 000     0  0012346899999999999998777788877765

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.39  E-value=0.00038  Score=67.64  Aligned_cols=80  Identities=23%  Similarity=0.386  Sum_probs=55.0

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      ++++|+++|||+++ +|.++|+.|++.|++|++.+++........+++.+.+.  .++...  +..++   .+      .
T Consensus         2 ~~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~g~--~~~~~~--~~~~~---~~------~   67 (447)
T PRK02472          2 EYQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLEEGI--KVICGS--HPLEL---LD------E   67 (447)
T ss_pred             CcCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhcCC--EEEeCC--CCHHH---hc------C
Confidence            35789999999976 99999999999999999999876544444455554442  222211  11111   11      1


Q ss_pred             CccEEEEcCCCCCC
Q 022103          107 ALDILVNNAGVSFN  120 (302)
Q Consensus       107 ~id~lv~~aG~~~~  120 (302)
                      .+|.||.++|+...
T Consensus        68 ~~d~vV~s~gi~~~   81 (447)
T PRK02472         68 DFDLMVKNPGIPYT   81 (447)
T ss_pred             cCCEEEECCCCCCC
Confidence            48999999998643

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=97.38  E-value=0.0038  Score=56.64  Aligned_cols=81  Identities=16%  Similarity=0.204  Sum_probs=56.9

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      .+|++++|+|+++++|.++++.+...|.+|++++++.++.+.. .++   +.+   ..+|..+.+..+.+.+....  ..
T Consensus       143 ~~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~---g~~---~~~~~~~~~~~~~~~~~~~~--~~  213 (325)
T cd08253         143 KAGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELV-RQA---GAD---AVFNYRAEDLADRILAATAG--QG  213 (325)
T ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc---CCC---EEEeCCCcCHHHHHHHHcCC--Cc
Confidence            3588999999999999999999999999999999988766554 222   221   22445554444444333222  36


Q ss_pred             ccEEEEcCCC
Q 022103          108 LDILVNNAGV  117 (302)
Q Consensus       108 id~lv~~aG~  117 (302)
                      +|.+++++|.
T Consensus       214 ~d~vi~~~~~  223 (325)
T cd08253         214 VDVIIEVLAN  223 (325)
T ss_pred             eEEEEECCch
Confidence            9999999874

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=97.35  E-value=0.0029  Score=51.93  Aligned_cols=112  Identities=18%  Similarity=0.245  Sum_probs=72.8

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcC--CEEEEEecChhhHHHHHHHHhhCC----CceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           32 IAIVTGANKGIGFALVKRLAELG--LTVILTARDVERGQRAVESLSEKG----LPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        32 ~vlItGas~gIG~ala~~l~~~G--~~V~l~~r~~~~~~~~~~~l~~~~----~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      .+.|+|++|.+|.++|..|...+  .++++++++.++++..+..+.+..    .+.....   .+.+++           
T Consensus         2 KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~---~~~~~~-----------   67 (141)
T PF00056_consen    2 KVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITS---GDYEAL-----------   67 (141)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEE---SSGGGG-----------
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccc---cccccc-----------
Confidence            47899999999999999999997  479999999888777777665431    1122222   344433           


Q ss_pred             CCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecC
Q 022103          106 AALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISS  166 (302)
Q Consensus       106 g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS  166 (302)
                      ...|++|.++|....+  ..+   -.+.++.|..-    .+.+.+.+.+....+.++.+|.
T Consensus        68 ~~aDivvitag~~~~~--g~s---R~~ll~~N~~i----~~~~~~~i~~~~p~~~vivvtN  119 (141)
T PF00056_consen   68 KDADIVVITAGVPRKP--GMS---RLDLLEANAKI----VKEIAKKIAKYAPDAIVIVVTN  119 (141)
T ss_dssp             TTESEEEETTSTSSST--TSS---HHHHHHHHHHH----HHHHHHHHHHHSTTSEEEE-SS
T ss_pred             ccccEEEEeccccccc--ccc---HHHHHHHhHhH----HHHHHHHHHHhCCccEEEEeCC
Confidence            3789999999986432  123   44456666544    4444444444434566666653

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=97.33  E-value=0.0021  Score=59.52  Aligned_cols=111  Identities=22%  Similarity=0.267  Sum_probs=72.2

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcC--CEEEEEecChhhHHHHHHHHhhCC----CceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           32 IAIVTGANKGIGFALVKRLAELG--LTVILTARDVERGQRAVESLSEKG----LPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        32 ~vlItGas~gIG~ala~~l~~~G--~~V~l~~r~~~~~~~~~~~l~~~~----~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      .+.|.|+ |++|.++|..|+..|  .+|++++|+.++.+..+..+.+..    .......   .+.+++           
T Consensus         2 kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~---~~~~~l-----------   66 (306)
T cd05291           2 KVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKA---GDYSDC-----------   66 (306)
T ss_pred             EEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEc---CCHHHh-----------
Confidence            5788896 899999999999999  589999999988877777765431    1222221   232222           


Q ss_pred             CCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecC
Q 022103          106 AALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISS  166 (302)
Q Consensus       106 g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS  166 (302)
                      ...|++|+++|....+  ..+   -.+.++.|..    +.+.+.+.+.+....+.|+++|-
T Consensus        67 ~~aDIVIitag~~~~~--g~~---R~dll~~N~~----i~~~~~~~i~~~~~~~~vivvsN  118 (306)
T cd05291          67 KDADIVVITAGAPQKP--GET---RLDLLEKNAK----IMKSIVPKIKASGFDGIFLVASN  118 (306)
T ss_pred             CCCCEEEEccCCCCCC--CCC---HHHHHHHHHH----HHHHHHHHHHHhCCCeEEEEecC
Confidence            3789999999986432  223   3344555544    44555555555444566777663

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=97.33  E-value=0.0044  Score=56.80  Aligned_cols=81  Identities=25%  Similarity=0.385  Sum_probs=59.0

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      .++++++|+|+++++|.++++.+...|++|++++++.++.+.. ..+   +..   ...|..+.+..+.+.+....  ..
T Consensus       165 ~~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~---~~~---~~~~~~~~~~~~~~~~~~~~--~~  235 (342)
T cd08266         165 RPGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERA-KEL---GAD---YVIDYRKEDFVREVRELTGK--RG  235 (342)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc---CCC---eEEecCChHHHHHHHHHhCC--CC
Confidence            3578999999999999999999999999999999988765543 222   221   22466666655555544432  36


Q ss_pred             ccEEEEcCCC
Q 022103          108 LDILVNNAGV  117 (302)
Q Consensus       108 id~lv~~aG~  117 (302)
                      +|++++++|.
T Consensus       236 ~d~~i~~~g~  245 (342)
T cd08266         236 VDVVVEHVGA  245 (342)
T ss_pred             CcEEEECCcH
Confidence            9999999884

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>cd00704 MDH Malate dehydrogenase

Probab=97.28  E-value=0.0022  Score=59.96  Aligned_cols=111  Identities=14%  Similarity=0.155  Sum_probs=68.7

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCC-------EEEEEecCh--hhHHHHHHHHhhCCCceeEEEeeCCCHHHH--H--HHH
Q 022103           32 IAIVTGANKGIGFALVKRLAELGL-------TVILTARDV--ERGQRAVESLSEKGLPVNFFQLDVSDPSSI--E--AFV   98 (302)
Q Consensus        32 ~vlItGas~gIG~ala~~l~~~G~-------~V~l~~r~~--~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~--~--~~~   98 (302)
                      .+.|+|++|.+|..++..|+..|.       .+++++++.  +.              ......|+.+....  .  .+-
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~--------------~~g~~~Dl~d~~~~~~~~~~i~   67 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKA--------------LEGVVMELQDCAFPLLKGVVIT   67 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCc--------------cceeeeehhhhcccccCCcEEe
Confidence            589999999999999999998663       599999875  32              23334444443200  0  000


Q ss_pred             HHHHhhCCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcC-CCCCcEEEec
Q 022103           99 SWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRS-PSKSRILNIS  165 (302)
Q Consensus        99 ~~~~~~~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~-~~~~~iv~vs  165 (302)
                      ....+.+...|++|+.||....+  ..+   -.+.+..|.    .+.+.+.+.+.+. ...+.++.+|
T Consensus        68 ~~~~~~~~~aDiVVitAG~~~~~--g~t---R~dll~~N~----~i~~~i~~~i~~~~~~~~iiivvs  126 (323)
T cd00704          68 TDPEEAFKDVDVAILVGAFPRKP--GME---RADLLRKNA----KIFKEQGEALNKVAKPTVKVLVVG  126 (323)
T ss_pred             cChHHHhCCCCEEEEeCCCCCCc--CCc---HHHHHHHhH----HHHHHHHHHHHHhCCCCeEEEEeC
Confidence            11223345799999999986432  223   444566554    4566666666665 2456677765

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=97.26  E-value=0.0018  Score=55.62  Aligned_cols=78  Identities=22%  Similarity=0.176  Sum_probs=48.3

Q ss_pred             ccCcEEEEeCC----------------CchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCH
Q 022103           28 SKETIAIVTGA----------------NKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP   91 (302)
Q Consensus        28 ~~~k~vlItGa----------------s~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~   91 (302)
                      ++||+||||+|                ||-.|.++|+.+..+|++|+++..... ...        ...+  -..++.+.
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~-~~~--------p~~~--~~i~v~sa   69 (185)
T PF04127_consen    1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSS-LPP--------PPGV--KVIRVESA   69 (185)
T ss_dssp             -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS-------------TTE--EEEE-SSH
T ss_pred             CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCcc-ccc--------cccc--eEEEecch
Confidence            57899999987                588999999999999999999887742 110        1133  33446666


Q ss_pred             HHHHHHHHHHHhhCCCccEEEEcCCCCC
Q 022103           92 SSIEAFVSWFKSNFAALDILVNNAGVSF  119 (302)
Q Consensus        92 ~~~~~~~~~~~~~~g~id~lv~~aG~~~  119 (302)
                      +++.+.+.+.   +...|++|++|+++.
T Consensus        70 ~em~~~~~~~---~~~~Di~I~aAAVsD   94 (185)
T PF04127_consen   70 EEMLEAVKEL---LPSADIIIMAAAVSD   94 (185)
T ss_dssp             HHHHHHHHHH---GGGGSEEEE-SB--S
T ss_pred             hhhhhhhccc---cCcceeEEEecchhh
Confidence            6655555544   345699999999874

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=97.25  E-value=0.0032  Score=57.77  Aligned_cols=76  Identities=24%  Similarity=0.225  Sum_probs=55.8

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGL-TVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      +.++++++|.|+ ||.|++++..|++.|+ +|++++|+.++.+..++.+.+....+.+...  .   ++.+       ..
T Consensus       124 ~~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~--~---~~~~-------~~  190 (284)
T PRK12549        124 DASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATAG--S---DLAA-------AL  190 (284)
T ss_pred             CccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEec--c---chHh-------hh
Confidence            467889999998 7799999999999998 7999999999999888887654322222221  1   1111       11


Q ss_pred             CCccEEEEcC
Q 022103          106 AALDILVNNA  115 (302)
Q Consensus       106 g~id~lv~~a  115 (302)
                      ...|+||++.
T Consensus       191 ~~aDiVInaT  200 (284)
T PRK12549        191 AAADGLVHAT  200 (284)
T ss_pred             CCCCEEEECC
Confidence            3689999995

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=97.23  E-value=0.0055  Score=57.10  Aligned_cols=115  Identities=17%  Similarity=0.230  Sum_probs=75.4

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCC--EEEEEecChhhHHHHHHHHhhCC---CceeEEEeeCCCHHHHHHHHHHH
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGL--TVILTARDVERGQRAVESLSEKG---LPVNFFQLDVSDPSSIEAFVSWF  101 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~--~V~l~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dlt~~~~~~~~~~~~  101 (302)
                      +.+++.+.|+|+ |.+|..+|..|+..|.  ++++++++.++++..+..+.+..   .++.+. .  .+.+++       
T Consensus         3 ~~~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~-~--~~~~~~-------   71 (315)
T PRK00066          3 KKQHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIY-A--GDYSDC-------   71 (315)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEE-e--CCHHHh-------
Confidence            445679999998 9999999999999986  79999999888877777776532   122222 1  222222       


Q ss_pred             HhhCCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEec
Q 022103          102 KSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNIS  165 (302)
Q Consensus       102 ~~~~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vs  165 (302)
                          ...|++|..||....+  ..+.   .+.+..|..    +.+.+.+.+.+....+.++++|
T Consensus        72 ----~~adivIitag~~~k~--g~~R---~dll~~N~~----i~~~i~~~i~~~~~~~~vivvs  122 (315)
T PRK00066         72 ----KDADLVVITAGAPQKP--GETR---LDLVEKNLK----IFKSIVGEVMASGFDGIFLVAS  122 (315)
T ss_pred             ----CCCCEEEEecCCCCCC--CCCH---HHHHHHHHH----HHHHHHHHHHHhCCCeEEEEcc
Confidence                3789999999986432  2333   344555544    4444455555443456666666

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=97.16  E-value=0.0019  Score=59.17  Aligned_cols=78  Identities=24%  Similarity=0.303  Sum_probs=59.3

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhh
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGL-TVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSN  104 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~  104 (302)
                      +..++++++|.|+ ||-+++++..|++.|+ +|+++.|+.++.++.++.+.+.+.  .....++.+.+...         
T Consensus       122 ~~~~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~--~~~~~~~~~~~~~~---------  189 (283)
T COG0169         122 VDVTGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGA--AVEAAALADLEGLE---------  189 (283)
T ss_pred             cccCCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccc--cccccccccccccc---------
Confidence            5667999999998 7799999999999995 799999999999999998876543  11222333333211         


Q ss_pred             CCCccEEEEcCCC
Q 022103          105 FAALDILVNNAGV  117 (302)
Q Consensus       105 ~g~id~lv~~aG~  117 (302)
                        ..|+|||+...
T Consensus       190 --~~dliINaTp~  200 (283)
T COG0169         190 --EADLLINATPV  200 (283)
T ss_pred             --ccCEEEECCCC
Confidence              47999999764

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=97.12  E-value=0.0031  Score=59.02  Aligned_cols=114  Identities=14%  Similarity=0.132  Sum_probs=70.6

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCC-------EEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHH--HHH--HH
Q 022103           32 IAIVTGANKGIGFALVKRLAELGL-------TVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIE--AFV--SW  100 (302)
Q Consensus        32 ~vlItGas~gIG~ala~~l~~~G~-------~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~--~~~--~~  100 (302)
                      ++.|+|++|.+|..++..|+..|.       .++++++.....            .......|+.|.....  ...  ..
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~------------~a~g~~~Dl~d~~~~~~~~~~~~~~   68 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMK------------VLEGVVMELMDCAFPLLDGVVPTHD   68 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccc------------ccceeEeehhcccchhcCceeccCC
Confidence            478999999999999999998653       599999865320            1233445555544110  000  01


Q ss_pred             HHhhCCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcC-CCCCcEEEecC
Q 022103          101 FKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRS-PSKSRILNISS  166 (302)
Q Consensus       101 ~~~~~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~-~~~~~iv~vsS  166 (302)
                      ..+.+...|++|++||....+     -+.+.+.+..|+.    +.+.+.+.+.+. +..+.|+++|.
T Consensus        69 ~~~~~~~aDiVVitAG~~~~~-----~~tr~~ll~~N~~----i~k~i~~~i~~~~~~~~iiivvsN  126 (324)
T TIGR01758        69 PAVAFTDVDVAILVGAFPRKE-----GMERRDLLSKNVK----IFKEQGRALDKLAKKDCKVLVVGN  126 (324)
T ss_pred             hHHHhCCCCEEEEcCCCCCCC-----CCcHHHHHHHHHH----HHHHHHHHHHhhCCCCeEEEEeCC
Confidence            123445799999999986432     2335566776654    555555555554 24567777663

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>PRK06849 hypothetical protein; Provisional

Probab=97.11  E-value=0.0047  Score=58.99  Aligned_cols=82  Identities=21%  Similarity=0.261  Sum_probs=54.6

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHH-HHHHHHHHHHhhCCC
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPS-SIEAFVSWFKSNFAA  107 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~-~~~~~~~~~~~~~g~  107 (302)
                      +.++|||||++.++|..+++.|.+.|++|++++..........+.+.    ....+...-.+.+ .++.+.+-++++  +
T Consensus         3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~~~~s~~~d----~~~~~p~p~~d~~~~~~~L~~i~~~~--~   76 (389)
T PRK06849          3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKYPLSRFSRAVD----GFYTIPSPRWDPDAYIQALLSIVQRE--N   76 (389)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHhhh----heEEeCCCCCCHHHHHHHHHHHHHHc--C
Confidence            46899999999999999999999999999999988655433222221    2222222223443 344444444443  5


Q ss_pred             ccEEEEcCC
Q 022103          108 LDILVNNAG  116 (302)
Q Consensus       108 id~lv~~aG  116 (302)
                      +|+||....
T Consensus        77 id~vIP~~e   85 (389)
T PRK06849         77 IDLLIPTCE   85 (389)
T ss_pred             CCEEEECCh
Confidence            899998765

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=97.06  E-value=0.006  Score=53.10  Aligned_cols=81  Identities=19%  Similarity=0.336  Sum_probs=55.8

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecC-------------------hhhHHHHHHHHhhCCCcee--EE
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGL-TVILTARD-------------------VERGQRAVESLSEKGLPVN--FF   84 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~-------------------~~~~~~~~~~l~~~~~~~~--~~   84 (302)
                      .+++++|+|.|+ ||+|.++++.|++.|. ++++++++                   ..|.+.+.+.+++.++.+.  .+
T Consensus        18 kl~~~~VlviG~-GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~   96 (202)
T TIGR02356        18 RLLNSHVLIIGA-GGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTAL   96 (202)
T ss_pred             HhcCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEe
Confidence            477889999996 7899999999999997 79999887                   2355556666666554443  33


Q ss_pred             EeeCCCHHHHHHHHHHHHhhCCCccEEEEcCC
Q 022103           85 QLDVSDPSSIEAFVSWFKSNFAALDILVNNAG  116 (302)
Q Consensus        85 ~~Dlt~~~~~~~~~~~~~~~~g~id~lv~~aG  116 (302)
                      ..++. .+.+.++++       ..|++|.+..
T Consensus        97 ~~~i~-~~~~~~~~~-------~~D~Vi~~~d  120 (202)
T TIGR02356        97 KERVT-AENLELLIN-------NVDLVLDCTD  120 (202)
T ss_pred             hhcCC-HHHHHHHHh-------CCCEEEECCC
Confidence            33443 233333333       6788887754

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=97.05  E-value=0.0015  Score=60.25  Aligned_cols=77  Identities=29%  Similarity=0.329  Sum_probs=63.6

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCccE
Q 022103           31 TIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDI  110 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id~  110 (302)
                      ...+|-||+|..|.-+|++|+++|.+-.+.+|+..++..+..+|..   ....+++++  ++.+++.++       ..++
T Consensus         7 ~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~LG~---~~~~~p~~~--p~~~~~~~~-------~~~V   74 (382)
T COG3268           7 YDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASLGP---EAAVFPLGV--PAALEAMAS-------RTQV   74 (382)
T ss_pred             eeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhcCc---cccccCCCC--HHHHHHHHh-------cceE
Confidence            4689999999999999999999999999999999999999888854   344454444  666666666       6799


Q ss_pred             EEEcCCCCC
Q 022103          111 LVNNAGVSF  119 (302)
Q Consensus       111 lv~~aG~~~  119 (302)
                      |+||+|...
T Consensus        75 VlncvGPyt   83 (382)
T COG3268          75 VLNCVGPYT   83 (382)
T ss_pred             EEecccccc
Confidence            999999853

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=97.05  E-value=0.019  Score=51.05  Aligned_cols=36  Identities=25%  Similarity=0.296  Sum_probs=31.0

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGL-TVILTARD   63 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~   63 (302)
                      .+++.+|+|.|. ||+|.++++.|++.|. ++++++.+
T Consensus         8 ~L~~~~VlVvG~-GGvGs~va~~Lar~GVg~i~LvD~D   44 (231)
T cd00755           8 KLRNAHVAVVGL-GGVGSWAAEALARSGVGKLTLIDFD   44 (231)
T ss_pred             HHhCCCEEEECC-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            367788999988 7899999999999997 78888765

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=97.04  E-value=0.004  Score=57.10  Aligned_cols=79  Identities=23%  Similarity=0.223  Sum_probs=55.9

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGL-TVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      .+++++++|.|+ ||.|++++..|++.|+ +|.++.|+.++.+..++++.... .+.  .  +...+++.       ...
T Consensus       122 ~~~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~-~~~--~--~~~~~~~~-------~~~  188 (282)
T TIGR01809       122 PLAGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVG-VIT--R--LEGDSGGL-------AIE  188 (282)
T ss_pred             ccCCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcC-cce--e--ccchhhhh-------hcc
Confidence            357899999987 8899999999999997 69999999999888887765321 111  1  11112221       112


Q ss_pred             CCccEEEEcCCCC
Q 022103          106 AALDILVNNAGVS  118 (302)
Q Consensus       106 g~id~lv~~aG~~  118 (302)
                      ...|+||++....
T Consensus       189 ~~~DiVInaTp~g  201 (282)
T TIGR01809       189 KAAEVLVSTVPAD  201 (282)
T ss_pred             cCCCEEEECCCCC
Confidence            4689999998653

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=96.99  E-value=0.0013  Score=57.23  Aligned_cols=48  Identities=25%  Similarity=0.281  Sum_probs=42.2

Q ss_pred             cccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHH
Q 022103           25 KWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVES   73 (302)
Q Consensus        25 ~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~   73 (302)
                      ..+++||+++|+|.+ .+|+.+|+.|.+.|++|++.+++.++++...+.
T Consensus        23 ~~~l~gk~v~I~G~G-~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~   70 (200)
T cd01075          23 TDSLEGKTVAVQGLG-KVGYKLAEHLLEEGAKLIVADINEEAVARAAEL   70 (200)
T ss_pred             CCCCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH
Confidence            567899999999995 799999999999999999999998777766554

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=96.97  E-value=0.029  Score=51.05  Aligned_cols=36  Identities=25%  Similarity=0.343  Sum_probs=31.1

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGL-TVILTARD   63 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~   63 (302)
                      .+++.+|+|.|+ ||+|.++|+.|++.|. ++++++.+
T Consensus        27 kL~~s~VlVvG~-GGVGs~vae~Lar~GVg~itLiD~D   63 (268)
T PRK15116         27 LFADAHICVVGI-GGVGSWAAEALARTGIGAITLIDMD   63 (268)
T ss_pred             HhcCCCEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            367889999988 7899999999999994 78888775

>PRK05086 malate dehydrogenase; Provisional

Probab=96.95  E-value=0.0064  Score=56.57  Aligned_cols=103  Identities=22%  Similarity=0.136  Sum_probs=58.1

Q ss_pred             EEEEeCCCchHHHHHHHHHHH-c--CCEEEEEecChhhHHHHHHHHhhCCCceeEEEe-eCCCHHHHHHHHHHHHhhCCC
Q 022103           32 IAIVTGANKGIGFALVKRLAE-L--GLTVILTARDVERGQRAVESLSEKGLPVNFFQL-DVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        32 ~vlItGas~gIG~ala~~l~~-~--G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~-Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      .++|.||+|+||.+++..|.. .  +..+++++|+.. .+..+-.+.+.. ....+.. +-.+   +.+.       +..
T Consensus         2 KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~-~~g~alDl~~~~-~~~~i~~~~~~d---~~~~-------l~~   69 (312)
T PRK05086          2 KVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPV-TPGVAVDLSHIP-TAVKIKGFSGED---PTPA-------LEG   69 (312)
T ss_pred             EEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCC-CcceehhhhcCC-CCceEEEeCCCC---HHHH-------cCC
Confidence            689999999999999998865 2  457888888743 211111122211 1112222 1112   1111       136


Q ss_pred             ccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhh
Q 022103          108 LDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPL  151 (302)
Q Consensus       108 id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~  151 (302)
                      .|++|.++|....+  ..   ...+.+..|....-.+.+.+.++
T Consensus        70 ~DiVIitaG~~~~~--~~---~R~dll~~N~~i~~~ii~~i~~~  108 (312)
T PRK05086         70 ADVVLISAGVARKP--GM---DRSDLFNVNAGIVKNLVEKVAKT  108 (312)
T ss_pred             CCEEEEcCCCCCCC--CC---CHHHHHHHHHHHHHHHHHHHHHh
Confidence            89999999986432  12   24455777765555555554443

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=96.94  E-value=0.0085  Score=54.99  Aligned_cols=80  Identities=24%  Similarity=0.280  Sum_probs=55.4

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGL-TVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      ..++|+++|.|+ ||-|++++..|++.|+ +|.++.|+.++.+..++.+.+..........+   ...+....       
T Consensus       124 ~~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~~~~~~~~~~~---~~~~~~~~-------  192 (283)
T PRK14027        124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVD---ARGIEDVI-------  192 (283)
T ss_pred             CcCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhccCcceEEecC---HhHHHHHH-------
Confidence            356899999998 8899999999999997 69999999999888888775322111111222   22221111       


Q ss_pred             CCccEEEEcCCC
Q 022103          106 AALDILVNNAGV  117 (302)
Q Consensus       106 g~id~lv~~aG~  117 (302)
                      ...|+|||+...
T Consensus       193 ~~~divINaTp~  204 (283)
T PRK14027        193 AAADGVVNATPM  204 (283)
T ss_pred             hhcCEEEEcCCC
Confidence            257999998753

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=96.93  E-value=0.0019  Score=64.35  Aligned_cols=48  Identities=27%  Similarity=0.340  Sum_probs=42.7

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHH
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESL   74 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l   74 (302)
                      .++++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+...+++
T Consensus       375 ~~~~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l  422 (529)
T PLN02520        375 SPLAGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELADAV  422 (529)
T ss_pred             cCCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh
Confidence            3577899999999 69999999999999999999999988888777665

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=96.89  E-value=0.0051  Score=59.41  Aligned_cols=77  Identities=17%  Similarity=0.245  Sum_probs=56.2

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhh
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGL-TVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSN  104 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~  104 (302)
                      .++++++++|.|+ ||+|+.+++.|+..|+ +++++.|+.++.+..+++++.    ...+     ..+++...       
T Consensus       177 ~~l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~----~~~~-----~~~~l~~~-------  239 (414)
T PRK13940        177 DNISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRN----ASAH-----YLSELPQL-------  239 (414)
T ss_pred             cCccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcC----CeEe-----cHHHHHHH-------
Confidence            4588999999999 8999999999999996 699999999887777766531    1111     12232222       


Q ss_pred             CCCccEEEEcCCCCC
Q 022103          105 FAALDILVNNAGVSF  119 (302)
Q Consensus       105 ~g~id~lv~~aG~~~  119 (302)
                      +...|+||++.+...
T Consensus       240 l~~aDiVI~aT~a~~  254 (414)
T PRK13940        240 IKKADIIIAAVNVLE  254 (414)
T ss_pred             hccCCEEEECcCCCC
Confidence            246799999987643

>PRK14968 putative methyltransferase; Provisional

Probab=96.89  E-value=0.017  Score=48.85  Aligned_cols=121  Identities=15%  Similarity=0.156  Sum_probs=71.8

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCc---eeEEEeeCCCHHHHHHHHHHHHhh
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLP---VNFFQLDVSDPSSIEAFVSWFKSN  104 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~---~~~~~~Dlt~~~~~~~~~~~~~~~  104 (302)
                      .++++++-.|++.|.   ++..|++.+.+|+.++++++-.+.+.+.+...+.+   +.++.+|+.+.         +.+ 
T Consensus        22 ~~~~~vLd~G~G~G~---~~~~l~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~---------~~~-   88 (188)
T PRK14968         22 KKGDRVLEVGTGSGI---VAIVAAKNGKKVVGVDINPYAVECAKCNAKLNNIRNNGVEVIRSDLFEP---------FRG-   88 (188)
T ss_pred             cCCCEEEEEccccCH---HHHHHHhhcceEEEEECCHHHHHHHHHHHHHcCCCCcceEEEecccccc---------ccc-
Confidence            467889999987665   55555556899999999988777776666554432   77888887542         111 


Q ss_pred             CCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhH---HHHHHHHHhhhhhcCCCCCcEEEec
Q 022103          105 FAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYG---AKLLTESLLPLFRRSPSKSRILNIS  165 (302)
Q Consensus       105 ~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~---~~~l~~~~~~~l~~~~~~~~iv~vs  165 (302)
                       ..+|.++.|.............+.+...+.....+   .-.+++.+.+.|+.   .|.++++.
T Consensus        89 -~~~d~vi~n~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~Lk~---gG~~~~~~  148 (188)
T PRK14968         89 -DKFDVILFNPPYLPTEEEEEWDDWLNYALSGGKDGREVIDRFLDEVGRYLKP---GGRILLLQ  148 (188)
T ss_pred             -cCceEEEECCCcCCCCchhhhhhhhhhhhccCcChHHHHHHHHHHHHHhcCC---CeEEEEEE
Confidence             26899999876543211111111222222222222   23356677777754   36666554

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=96.88  E-value=0.005  Score=54.55  Aligned_cols=76  Identities=26%  Similarity=0.326  Sum_probs=58.8

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCccE
Q 022103           31 TIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDI  110 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id~  110 (302)
                      +.++|.|+ |-+|..+|+.|.+.|++|++++++.++.++....-    -....+.+|-++++-++++--      ...|+
T Consensus         1 m~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~----~~~~~v~gd~t~~~~L~~agi------~~aD~   69 (225)
T COG0569           1 MKIIIIGA-GRVGRSVARELSEEGHNVVLIDRDEERVEEFLADE----LDTHVVIGDATDEDVLEEAGI------DDADA   69 (225)
T ss_pred             CEEEEECC-cHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhh----cceEEEEecCCCHHHHHhcCC------CcCCE
Confidence            35778887 55999999999999999999999998877644321    257889999999987765411      36788


Q ss_pred             EEEcCCC
Q 022103          111 LVNNAGV  117 (302)
Q Consensus       111 lv~~aG~  117 (302)
                      ++...|.
T Consensus        70 vva~t~~   76 (225)
T COG0569          70 VVAATGN   76 (225)
T ss_pred             EEEeeCC
Confidence            8887765

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=96.86  E-value=0.0091  Score=56.20  Aligned_cols=81  Identities=21%  Similarity=0.337  Sum_probs=57.5

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecCh---------------------hhHHHHHHHHhhCCCc--ee
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGL-TVILTARDV---------------------ERGQRAVESLSEKGLP--VN   82 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~~---------------------~~~~~~~~~l~~~~~~--~~   82 (302)
                      .+++++|+|.|+ ||+|..+|+.|++.|. ++.+++++.                     .|.+.+.+.+.+.+..  +.
T Consensus        21 ~L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~   99 (338)
T PRK12475         21 KIREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIV   99 (338)
T ss_pred             hhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEE
Confidence            477889999998 7799999999999998 799999874                     2445555666665544  45


Q ss_pred             EEEeeCCCHHHHHHHHHHHHhhCCCccEEEEcCC
Q 022103           83 FFQLDVSDPSSIEAFVSWFKSNFAALDILVNNAG  116 (302)
Q Consensus        83 ~~~~Dlt~~~~~~~~~~~~~~~~g~id~lv~~aG  116 (302)
                      .+..|++. +.+.+++       ...|++|.+..
T Consensus       100 ~~~~~~~~-~~~~~~~-------~~~DlVid~~D  125 (338)
T PRK12475        100 PVVTDVTV-EELEELV-------KEVDLIIDATD  125 (338)
T ss_pred             EEeccCCH-HHHHHHh-------cCCCEEEEcCC
Confidence            56666653 3444443       26788887763

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=96.84  E-value=0.021  Score=56.51  Aligned_cols=85  Identities=22%  Similarity=0.297  Sum_probs=56.8

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCH-------------HHH
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP-------------SSI   94 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~-------------~~~   94 (302)
                      ..+.+|+|+|+ |.+|+..+..+...|++|++++++.++++.+.+ +   |.+  ++..|..+.             +..
T Consensus       163 ~pg~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~aes-l---GA~--~v~i~~~e~~~~~~gya~~~s~~~~  235 (509)
T PRK09424        163 VPPAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVES-M---GAE--FLELDFEEEGGSGDGYAKVMSEEFI  235 (509)
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c---CCe--EEEeccccccccccchhhhcchhHH
Confidence            46889999999 779999999999999999999999987664433 3   333  222232221             111


Q ss_pred             HHHHHHHHhhCCCccEEEEcCCCCC
Q 022103           95 EAFVSWFKSNFAALDILVNNAGVSF  119 (302)
Q Consensus        95 ~~~~~~~~~~~g~id~lv~~aG~~~  119 (302)
                      +...+.+.+..+..|++|.++|...
T Consensus       236 ~~~~~~~~~~~~gaDVVIetag~pg  260 (509)
T PRK09424        236 KAEMALFAEQAKEVDIIITTALIPG  260 (509)
T ss_pred             HHHHHHHHhccCCCCEEEECCCCCc
Confidence            2222222232356999999999864

>TIGR00518 alaDH alanine dehydrogenase

Probab=96.83  E-value=0.013  Score=55.78  Aligned_cols=77  Identities=18%  Similarity=0.201  Sum_probs=56.1

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      +++++++|.|+ |.+|+..++.+.+.|++|++++|+.++++.......   ..   +..+..+.+++.+.+.       .
T Consensus       165 l~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g---~~---v~~~~~~~~~l~~~l~-------~  230 (370)
T TIGR00518       165 VEPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFG---GR---IHTRYSNAYEIEDAVK-------R  230 (370)
T ss_pred             CCCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcC---ce---eEeccCCHHHHHHHHc-------c
Confidence            46677999988 789999999999999999999999877665544332   11   2334555665544443       5


Q ss_pred             ccEEEEcCCCC
Q 022103          108 LDILVNNAGVS  118 (302)
Q Consensus       108 id~lv~~aG~~  118 (302)
                      .|++|++++..
T Consensus       231 aDvVI~a~~~~  241 (370)
T TIGR00518       231 ADLLIGAVLIP  241 (370)
T ss_pred             CCEEEEccccC
Confidence            79999998664

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=96.82  E-value=0.0074  Score=56.40  Aligned_cols=155  Identities=15%  Similarity=0.059  Sum_probs=91.7

Q ss_pred             CcEEEEeCCCchHHHHHHHHHHHcCC-------EEEEEecChhh--HHHHHHHHhhCC----CceeEEEeeCCCHHHHHH
Q 022103           30 ETIAIVTGANKGIGFALVKRLAELGL-------TVILTARDVER--GQRAVESLSEKG----LPVNFFQLDVSDPSSIEA   96 (302)
Q Consensus        30 ~k~vlItGas~gIG~ala~~l~~~G~-------~V~l~~r~~~~--~~~~~~~l~~~~----~~~~~~~~Dlt~~~~~~~   96 (302)
                      .+.+.|+|++|.+|..+|..|+..|.       ++++++.....  ++..+..+.+..    .++.+   .-.+.++   
T Consensus         2 p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i---~~~~~~~---   75 (322)
T cd01338           2 PVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVI---TDDPNVA---   75 (322)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEE---ecCcHHH---
Confidence            35789999999999999999998875       79999985432  443333333221    11111   1112222   


Q ss_pred             HHHHHHhhCCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCC-CCCcEEEecCCCccccccc
Q 022103           97 FVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSP-SKSRILNISSRLGTLSKVR  175 (302)
Q Consensus        97 ~~~~~~~~~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~-~~~~iv~vsS~~~~~~~~~  175 (302)
                              +...|++|.+||....+  ..+   -.+.+..|.    -+.+.+.+.+.+.. ..+.++++|--.-....  
T Consensus        76 --------~~daDivvitaG~~~k~--g~t---R~dll~~N~----~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~--  136 (322)
T cd01338          76 --------FKDADWALLVGAKPRGP--GME---RADLLKANG----KIFTAQGKALNDVASRDVKVLVVGNPCNTNAL--  136 (322)
T ss_pred             --------hCCCCEEEEeCCCCCCC--CCc---HHHHHHHHH----HHHHHHHHHHHhhCCCCeEEEEecCcHHHHHH--
Confidence                    24789999999986432  233   334466654    45666666666653 25666666531111000  


Q ss_pred             CcccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHcc
Q 022103          176 NPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYE  240 (302)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~  240 (302)
                                              +.       |+.-+..+....|+.++....-|...+++.+.
T Consensus       137 ------------------------~~-------~k~sg~~p~~~ViG~t~LDs~Rl~~~la~~lg  170 (322)
T cd01338         137 ------------------------IA-------MKNAPDIPPDNFTAMTRLDHNRAKSQLAKKAG  170 (322)
T ss_pred             ------------------------HH-------HHHcCCCChHheEEehHHHHHHHHHHHHHHhC
Confidence                                    00       00011012235688899999999999999864

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=96.78  E-value=0.0085  Score=55.76  Aligned_cols=82  Identities=18%  Similarity=0.251  Sum_probs=55.0

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      -+|.+++|+|++|++|..+++.+...|++|+.+.++.++.+.+.+.+   |.+ .+  .|..+.+++.+.+.+...  +.
T Consensus       150 ~~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~l---Ga~-~v--i~~~~~~~~~~~i~~~~~--~g  221 (338)
T cd08295         150 KKGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKL---GFD-DA--FNYKEEPDLDAALKRYFP--NG  221 (338)
T ss_pred             CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCc-ee--EEcCCcccHHHHHHHhCC--CC
Confidence            35889999999999999999888888999999999987766554434   222 11  232222233333333322  36


Q ss_pred             ccEEEEcCCC
Q 022103          108 LDILVNNAGV  117 (302)
Q Consensus       108 id~lv~~aG~  117 (302)
                      +|+++.+.|.
T Consensus       222 vd~v~d~~g~  231 (338)
T cd08295         222 IDIYFDNVGG  231 (338)
T ss_pred             cEEEEECCCH
Confidence            8999988774

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=96.78  E-value=0.0081  Score=56.23  Aligned_cols=77  Identities=21%  Similarity=0.353  Sum_probs=53.5

Q ss_pred             CcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC-C-C
Q 022103           30 ETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF-A-A  107 (302)
Q Consensus        30 ~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~-g-~  107 (302)
                      |.++||+||+||+|...++.....|+.++++..+.++.+ ..+++.   .+.   ..|..+.+    +.+++++.. + .
T Consensus       143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~-~~~~lG---Ad~---vi~y~~~~----~~~~v~~~t~g~g  211 (326)
T COG0604         143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE-LLKELG---ADH---VINYREED----FVEQVRELTGGKG  211 (326)
T ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH-HHHhcC---CCE---EEcCCccc----HHHHHHHHcCCCC
Confidence            899999999999999999988888988777777777766 555443   221   12233333    333333322 2 5


Q ss_pred             ccEEEEcCCC
Q 022103          108 LDILVNNAGV  117 (302)
Q Consensus       108 id~lv~~aG~  117 (302)
                      +|+++...|.
T Consensus       212 vDvv~D~vG~  221 (326)
T COG0604         212 VDVVLDTVGG  221 (326)
T ss_pred             ceEEEECCCH
Confidence            9999999887

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=96.74  E-value=0.0079  Score=55.30  Aligned_cols=44  Identities=20%  Similarity=0.317  Sum_probs=38.8

Q ss_pred             cccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHH
Q 022103           25 KWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQR   69 (302)
Q Consensus        25 ~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~   69 (302)
                      .+.++|++++|.|. |++|+++|+.|...|++|++++|+.++.+.
T Consensus       146 ~~~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~  189 (287)
T TIGR02853       146 DFTIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLAR  189 (287)
T ss_pred             CCCCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence            35789999999999 669999999999999999999999876544

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=96.71  E-value=0.013  Score=53.01  Aligned_cols=81  Identities=20%  Similarity=0.274  Sum_probs=56.0

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      .++++++|+|+++++|.++++.+...|++|++++++.++.+.. +.+   +..   ...+..+.+....+.+...  .+.
T Consensus       138 ~~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~---g~~---~~~~~~~~~~~~~~~~~~~--~~~  208 (323)
T cd05276         138 KAGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEAC-RAL---GAD---VAINYRTEDFAEEVKEATG--GRG  208 (323)
T ss_pred             CCCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHc---CCC---EEEeCCchhHHHHHHHHhC--CCC
Confidence            3578999999999999999999999999999999987766554 332   221   2234443333333332221  146


Q ss_pred             ccEEEEcCCC
Q 022103          108 LDILVNNAGV  117 (302)
Q Consensus       108 id~lv~~aG~  117 (302)
                      +|.+++++|.
T Consensus       209 ~d~vi~~~g~  218 (323)
T cd05276         209 VDVILDMVGG  218 (323)
T ss_pred             eEEEEECCch
Confidence            9999999884

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=96.67  E-value=0.011  Score=55.54  Aligned_cols=82  Identities=17%  Similarity=0.231  Sum_probs=54.9

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      .+|.+++|.|++|++|..+++.+...|++|+.++++.++.+.+.+++   |... +  .|-.+.+++.+.+.+...  +.
T Consensus       157 ~~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~l---Ga~~-v--i~~~~~~~~~~~i~~~~~--~g  228 (348)
T PLN03154        157 KKGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL---GFDE-A--FNYKEEPDLDAALKRYFP--EG  228 (348)
T ss_pred             CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhc---CCCE-E--EECCCcccHHHHHHHHCC--CC
Confidence            35889999999999999999888888999999998887766554344   3221 1  222222233333333321  36


Q ss_pred             ccEEEEcCCC
Q 022103          108 LDILVNNAGV  117 (302)
Q Consensus       108 id~lv~~aG~  117 (302)
                      +|+++.++|.
T Consensus       229 vD~v~d~vG~  238 (348)
T PLN03154        229 IDIYFDNVGG  238 (348)
T ss_pred             cEEEEECCCH
Confidence            8999998874

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=96.67  E-value=0.029  Score=49.49  Aligned_cols=79  Identities=22%  Similarity=0.298  Sum_probs=53.4

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      .++.+++|+|+++ +|.++++.+...|.+|++++++.++.+.. +.+   +.. .  ..|..+.+....+.   ....+.
T Consensus       133 ~~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~---g~~-~--~~~~~~~~~~~~~~---~~~~~~  201 (271)
T cd05188         133 KPGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELA-KEL---GAD-H--VIDYKEEDLEEELR---LTGGGG  201 (271)
T ss_pred             CCCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHH-HHh---CCc-e--eccCCcCCHHHHHH---HhcCCC
Confidence            4678999999988 99999999988999999999987665543 322   211 1  12333333333332   222357


Q ss_pred             ccEEEEcCCC
Q 022103          108 LDILVNNAGV  117 (302)
Q Consensus       108 id~lv~~aG~  117 (302)
                      +|++++++|.
T Consensus       202 ~d~vi~~~~~  211 (271)
T cd05188         202 ADVVIDAVGG  211 (271)
T ss_pred             CCEEEECCCC
Confidence            9999999875

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=96.66  E-value=0.0097  Score=53.84  Aligned_cols=115  Identities=19%  Similarity=0.208  Sum_probs=69.6

Q ss_pred             EEEeCCCchHHHHHHHHHHHcC----CEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCc
Q 022103           33 AIVTGANKGIGFALVKRLAELG----LTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAAL  108 (302)
Q Consensus        33 vlItGas~gIG~ala~~l~~~G----~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~i  108 (302)
                      +.|.|++|.+|..++..|+..|    .+|++++++.++++.....+++.....  ....+.--++..+.+       ...
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~--~~~~i~~~~d~~~~~-------~~a   71 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPL--ADIKVSITDDPYEAF-------KDA   71 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhc--cCcEEEECCchHHHh-------CCC
Confidence            4789998899999999999999    789999999988887777776532211  011111111111122       368


Q ss_pred             cEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEec
Q 022103          109 DILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNIS  165 (302)
Q Consensus       109 d~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vs  165 (302)
                      |++|..+|....+  ..+   -.+.+.-|+-    +.+.+.+.+.+....+.++++|
T Consensus        72 DiVv~t~~~~~~~--g~~---r~~~~~~n~~----i~~~i~~~i~~~~p~a~~i~~t  119 (263)
T cd00650          72 DVVIITAGVGRKP--GMG---RLDLLKRNVP----IVKEIGDNIEKYSPDAWIIVVS  119 (263)
T ss_pred             CEEEECCCCCCCc--CCC---HHHHHHHHHH----HHHHHHHHHHHHCCCeEEEEec
Confidence            9999999976432  122   1223333333    4444455554443456666665

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=96.66  E-value=0.017  Score=55.53  Aligned_cols=48  Identities=29%  Similarity=0.425  Sum_probs=43.5

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcC-CEEEEEecChhhHHHHHHHHh
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELG-LTVILTARDVERGQRAVESLS   75 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G-~~V~l~~r~~~~~~~~~~~l~   75 (302)
                      ++++++++|.|+ |-+|.-+|++|+++| .+|+++.|+.++.++.++++.
T Consensus       175 ~L~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~  223 (414)
T COG0373         175 SLKDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLG  223 (414)
T ss_pred             ccccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhC
Confidence            489999999999 569999999999999 579999999999999988875

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=96.63  E-value=0.015  Score=56.31  Aligned_cols=75  Identities=23%  Similarity=0.326  Sum_probs=55.4

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGL-TVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      ++++++++|.|+ |.+|+.+++.|...|+ +|++++|+.++.+..++.+.   ..       ..+.+++.+.+       
T Consensus       179 ~~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g---~~-------~~~~~~~~~~l-------  240 (423)
T PRK00045        179 DLSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFG---GE-------AIPLDELPEAL-------  240 (423)
T ss_pred             CccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcC---Cc-------EeeHHHHHHHh-------
Confidence            478899999987 8999999999999997 79999999988777766643   11       11223333222       


Q ss_pred             CCccEEEEcCCCCC
Q 022103          106 AALDILVNNAGVSF  119 (302)
Q Consensus       106 g~id~lv~~aG~~~  119 (302)
                      ...|++|.+.|...
T Consensus       241 ~~aDvVI~aT~s~~  254 (423)
T PRK00045        241 AEADIVISSTGAPH  254 (423)
T ss_pred             ccCCEEEECCCCCC
Confidence            25799999987643

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=96.63  E-value=0.011  Score=54.52  Aligned_cols=81  Identities=19%  Similarity=0.179  Sum_probs=54.5

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      -+|.+++|+|++|++|..+++.+...|++|+.+.++.++.+.+ +++   |.+. +  .|..+.+.+.+.......  +.
T Consensus       137 ~~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~-~~l---Ga~~-v--i~~~~~~~~~~~~~~~~~--~g  207 (325)
T TIGR02825       137 KGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYL-KKL---GFDV-A--FNYKTVKSLEETLKKASP--DG  207 (325)
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc---CCCE-E--EeccccccHHHHHHHhCC--CC
Confidence            3578999999999999999888888899999999988765544 333   3221 1  222222233333333322  36


Q ss_pred             ccEEEEcCCC
Q 022103          108 LDILVNNAGV  117 (302)
Q Consensus       108 id~lv~~aG~  117 (302)
                      +|+++.+.|.
T Consensus       208 vdvv~d~~G~  217 (325)
T TIGR02825       208 YDCYFDNVGG  217 (325)
T ss_pred             eEEEEECCCH
Confidence            8999988875

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=96.61  E-value=0.017  Score=54.31  Aligned_cols=38  Identities=26%  Similarity=0.364  Sum_probs=33.6

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecCh
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGL-TVILTARDV   64 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~~   64 (302)
                      ..++.++|+|.|+ ||||..+|+.|++.|. ++.+++++.
T Consensus        20 ~~L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~   58 (339)
T PRK07688         20 QKLREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDY   58 (339)
T ss_pred             HHhcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCc
Confidence            3477889999999 7899999999999998 899999863

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=96.61  E-value=0.018  Score=55.73  Aligned_cols=74  Identities=22%  Similarity=0.363  Sum_probs=53.6

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcC-CEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELG-LTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G-~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      .+++++++|.|+ |.+|..+++.|...| .+|++++|+.++.+..++.+..   .  .+.     .+++.+.+.      
T Consensus       177 ~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~---~--~i~-----~~~l~~~l~------  239 (417)
T TIGR01035       177 SLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGG---E--AVK-----FEDLEEYLA------  239 (417)
T ss_pred             CccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCC---e--Eee-----HHHHHHHHh------
Confidence            478899999998 999999999999999 6899999999887766665431   1  111     123333332      


Q ss_pred             CCccEEEEcCCCC
Q 022103          106 AALDILVNNAGVS  118 (302)
Q Consensus       106 g~id~lv~~aG~~  118 (302)
                       ..|++|.+.|..
T Consensus       240 -~aDvVi~aT~s~  251 (417)
T TIGR01035       240 -EADIVISSTGAP  251 (417)
T ss_pred             -hCCEEEECCCCC
Confidence             568888887654

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=96.60  E-value=0.0061  Score=55.09  Aligned_cols=74  Identities=19%  Similarity=0.289  Sum_probs=55.1

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCccEE
Q 022103           32 IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDIL  111 (302)
Q Consensus        32 ~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id~l  111 (302)
                      +++|+|||+- |+.+++.|.+.|++|++..++....+...    ..  ....+..+..+.+++.+++.+-     ++|+|
T Consensus         2 ~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~----~~--g~~~v~~g~l~~~~l~~~l~~~-----~i~~V   69 (256)
T TIGR00715         2 TVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYP----IH--QALTVHTGALDPQELREFLKRH-----SIDIL   69 (256)
T ss_pred             eEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCcccccc----cc--CCceEEECCCCHHHHHHHHHhc-----CCCEE
Confidence            6899999997 99999999999999999999875433221    11  1234556667777777776543     79999


Q ss_pred             EEcCCC
Q 022103          112 VNNAGV  117 (302)
Q Consensus       112 v~~aG~  117 (302)
                      |..+..
T Consensus        70 IDAtHP   75 (256)
T TIGR00715        70 VDATHP   75 (256)
T ss_pred             EEcCCH
Confidence            998754

This enzyme was found to be a monomer by gel filtration.

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.58  E-value=0.017  Score=55.03  Aligned_cols=82  Identities=24%  Similarity=0.322  Sum_probs=55.8

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecC-------------------hhhHHHHHHHHhhCCCcee--EE
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGL-TVILTARD-------------------VERGQRAVESLSEKGLPVN--FF   84 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~-------------------~~~~~~~~~~l~~~~~~~~--~~   84 (302)
                      .+++++|+|.|+ ||+|.++++.|++.|. ++++++++                   ..|.+.+.+.+.+.+..+.  .+
T Consensus       132 ~l~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~  210 (376)
T PRK08762        132 RLLEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAV  210 (376)
T ss_pred             HHhcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEE
Confidence            367888999977 7899999999999998 69999887                   3456666666666554443  33


Q ss_pred             EeeCCCHHHHHHHHHHHHhhCCCccEEEEcCCC
Q 022103           85 QLDVSDPSSIEAFVSWFKSNFAALDILVNNAGV  117 (302)
Q Consensus        85 ~~Dlt~~~~~~~~~~~~~~~~g~id~lv~~aG~  117 (302)
                      ...++ .+.+.++++       ..|+||.+...
T Consensus       211 ~~~~~-~~~~~~~~~-------~~D~Vv~~~d~  235 (376)
T PRK08762        211 QERVT-SDNVEALLQ-------DVDVVVDGADN  235 (376)
T ss_pred             eccCC-hHHHHHHHh-------CCCEEEECCCC
Confidence            33333 233333333       57888877654

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.54  E-value=0.0088  Score=55.18  Aligned_cols=93  Identities=16%  Similarity=0.261  Sum_probs=69.9

Q ss_pred             CccccCCCCCcccccccccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeC
Q 022103            9 NYFSSSSSSSSLVSSTKWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDV   88 (302)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl   88 (302)
                      -+++...|..++....... +|+++.|+|++| ||---++.--+-|++|++++++..+.+++.+.+..+     .| .|.
T Consensus       162 PlLCaGITvYspLk~~g~~-pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LGAd-----~f-v~~  233 (360)
T KOG0023|consen  162 PLLCAGITVYSPLKRSGLG-PGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLGAD-----VF-VDS  233 (360)
T ss_pred             chhhcceEEeehhHHcCCC-CCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcCcc-----ee-EEe
Confidence            4668888888998888888 999999999987 885444444444999999999998888888887543     22 456


Q ss_pred             C-CHHHHHHHHHHHHhhCCCccEEEEcCC
Q 022103           89 S-DPSSIEAFVSWFKSNFAALDILVNNAG  116 (302)
Q Consensus        89 t-~~~~~~~~~~~~~~~~g~id~lv~~aG  116 (302)
                      + |.+.++++.+.       .|.+++++.
T Consensus       234 ~~d~d~~~~~~~~-------~dg~~~~v~  255 (360)
T KOG0023|consen  234 TEDPDIMKAIMKT-------TDGGIDTVS  255 (360)
T ss_pred             cCCHHHHHHHHHh-------hcCcceeee
Confidence            6 78888777774       455555554

>PTZ00117 malate dehydrogenase; Provisional

Probab=96.53  E-value=0.016  Score=54.02  Aligned_cols=115  Identities=17%  Similarity=0.145  Sum_probs=69.4

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcC-CEEEEEecChhhHHHHHHHHhhCC----CceeEEEeeCCCHHHHHHHHHHHHh
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELG-LTVILTARDVERGQRAVESLSEKG----LPVNFFQLDVSDPSSIEAFVSWFKS  103 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G-~~V~l~~r~~~~~~~~~~~l~~~~----~~~~~~~~Dlt~~~~~~~~~~~~~~  103 (302)
                      +.+.+.|+|+ |.+|..++..++..| ..|++++.+.++++...-.+....    .... +.. .+|.+.+         
T Consensus         4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~-i~~-~~d~~~l---------   71 (319)
T PTZ00117          4 KRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNIN-ILG-TNNYEDI---------   71 (319)
T ss_pred             CCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCCCeE-EEe-CCCHHHh---------
Confidence            4568999997 889999999999999 689999998866543332232211    1111 111 1232222         


Q ss_pred             hCCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecC
Q 022103          104 NFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISS  166 (302)
Q Consensus       104 ~~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS  166 (302)
                        ...|++|.++|....+  ..+   ..+.+..|.    -+.+.+.+.|.+....+.++++|-
T Consensus        72 --~~ADiVVitag~~~~~--g~~---r~dll~~n~----~i~~~i~~~i~~~~p~a~vivvsN  123 (319)
T PTZ00117         72 --KDSDVVVITAGVQRKE--EMT---REDLLTING----KIMKSVAESVKKYCPNAFVICVTN  123 (319)
T ss_pred             --CCCCEEEECCCCCCCC--CCC---HHHHHHHHH----HHHHHHHHHHHHHCCCeEEEEecC
Confidence              2679999999975432  123   344555665    355566666655534455666653

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=96.53  E-value=0.018  Score=52.86  Aligned_cols=75  Identities=25%  Similarity=0.356  Sum_probs=51.6

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCc
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAAL  108 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~i  108 (302)
                      ++.+++|+|+++++|.++++.+...|++|+++.++.++.+.. ..   .+.. .++  |.   +++.+.   +.. ...+
T Consensus       162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~---~~~~-~~~--~~---~~~~~~---~~~-~~~~  227 (332)
T cd08259         162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKIL-KE---LGAD-YVI--DG---SKFSED---VKK-LGGA  227 (332)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH-HH---cCCc-EEE--ec---HHHHHH---HHh-ccCC
Confidence            478999999999999999999999999999999887665443 22   2221 111  21   112222   222 2369


Q ss_pred             cEEEEcCCC
Q 022103          109 DILVNNAGV  117 (302)
Q Consensus       109 d~lv~~aG~  117 (302)
                      |++++++|.
T Consensus       228 d~v~~~~g~  236 (332)
T cd08259         228 DVVIELVGS  236 (332)
T ss_pred             CEEEECCCh
Confidence            999999875

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=96.53  E-value=0.029  Score=50.34  Aligned_cols=81  Identities=20%  Similarity=0.301  Sum_probs=53.3

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecCh-------------------hhHHHHHHHHhhCCCce--eEE
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGL-TVILTARDV-------------------ERGQRAVESLSEKGLPV--NFF   84 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~~-------------------~~~~~~~~~l~~~~~~~--~~~   84 (302)
                      .+++++|+|.|+ ||+|..+++.|+..|. ++++++.+.                   .|.+.+.+.+.+.++.+  ..+
T Consensus        29 ~L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~~~  107 (245)
T PRK05690         29 KLKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIAIETI  107 (245)
T ss_pred             HhcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEEEE
Confidence            467889999999 8999999999999997 688876642                   24444555565555444  344


Q ss_pred             EeeCCCHHHHHHHHHHHHhhCCCccEEEEcCC
Q 022103           85 QLDVSDPSSIEAFVSWFKSNFAALDILVNNAG  116 (302)
Q Consensus        85 ~~Dlt~~~~~~~~~~~~~~~~g~id~lv~~aG  116 (302)
                      ...++ ++.+.++++       ..|+||.+..
T Consensus       108 ~~~i~-~~~~~~~~~-------~~DiVi~~~D  131 (245)
T PRK05690        108 NARLD-DDELAALIA-------GHDLVLDCTD  131 (245)
T ss_pred             eccCC-HHHHHHHHh-------cCCEEEecCC
Confidence            44443 233333333       6788877753

>cd08293 PTGR2 Prostaglandin reductase

Probab=96.51  E-value=0.015  Score=54.10  Aligned_cols=79  Identities=16%  Similarity=0.167  Sum_probs=53.3

Q ss_pred             CcEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCc
Q 022103           30 ETIAIVTGANKGIGFALVKRLAELGL-TVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAAL  108 (302)
Q Consensus        30 ~k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~i  108 (302)
                      +.+++|+|++|++|.++++.+...|+ +|+.+.++.++.+.+.+++.   ... +  .|..+ .++.+.+.++..  +.+
T Consensus       155 ~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lG---a~~-v--i~~~~-~~~~~~i~~~~~--~gv  225 (345)
T cd08293         155 NQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELG---FDA-A--INYKT-DNVAERLRELCP--EGV  225 (345)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcC---CcE-E--EECCC-CCHHHHHHHHCC--CCc
Confidence            38999999999999999888777898 79999998877666555443   222 1  22222 223333333322  369


Q ss_pred             cEEEEcCCC
Q 022103          109 DILVNNAGV  117 (302)
Q Consensus       109 d~lv~~aG~  117 (302)
                      |+++.++|.
T Consensus       226 d~vid~~g~  234 (345)
T cd08293         226 DVYFDNVGG  234 (345)
T ss_pred             eEEEECCCc
Confidence            999998875

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>PLN00203 glutamyl-tRNA reductase

Probab=96.46  E-value=0.025  Score=56.18  Aligned_cols=79  Identities=19%  Similarity=0.259  Sum_probs=56.6

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGL-TVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      ++.+++++|.|+ |.+|+.+++.|...|+ +|+++.|+.++.+...+++.  +..+.+     ...+++...+.      
T Consensus       263 ~l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~--g~~i~~-----~~~~dl~~al~------  328 (519)
T PLN00203        263 SHASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFP--DVEIIY-----KPLDEMLACAA------  328 (519)
T ss_pred             CCCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhC--CCceEe-----ecHhhHHHHHh------
Confidence            377899999999 9999999999999997 69999999988887776653  112221     12223333332      


Q ss_pred             CCccEEEEcCCCCCC
Q 022103          106 AALDILVNNAGVSFN  120 (302)
Q Consensus       106 g~id~lv~~aG~~~~  120 (302)
                       ..|+||.+.+...+
T Consensus       329 -~aDVVIsAT~s~~p  342 (519)
T PLN00203        329 -EADVVFTSTSSETP  342 (519)
T ss_pred             -cCCEEEEccCCCCC
Confidence             67999988775433

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=96.45  E-value=0.02  Score=52.48  Aligned_cols=108  Identities=17%  Similarity=0.158  Sum_probs=73.5

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCc
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAAL  108 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~i  108 (302)
                      .|.|++|++|+|.+|.-..+----+|++|+.+.-+.+|.+.+.+++.-+.      ..|-..+ ++.+.+.+..-  ..|
T Consensus       150 ~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~lGfD~------~idyk~~-d~~~~L~~a~P--~GI  220 (340)
T COG2130         150 AGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELGFDA------GIDYKAE-DFAQALKEACP--KGI  220 (340)
T ss_pred             CCCEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhcCCce------eeecCcc-cHHHHHHHHCC--CCe
Confidence            48999999999999976554444469999999999999888888775321      1233333 33333333322  479


Q ss_pred             cEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCccccc
Q 022103          109 DILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSK  173 (302)
Q Consensus       109 d~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~  173 (302)
                      |+.+-|.|..                         +..++++.|+.   .+||+..+-++.+...
T Consensus       221 DvyfeNVGg~-------------------------v~DAv~~~ln~---~aRi~~CG~IS~YN~~  257 (340)
T COG2130         221 DVYFENVGGE-------------------------VLDAVLPLLNL---FARIPVCGAISQYNAP  257 (340)
T ss_pred             EEEEEcCCch-------------------------HHHHHHHhhcc---ccceeeeeehhhcCCC
Confidence            9999999973                         23344555654   4899988877766443

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=96.44  E-value=0.031  Score=51.35  Aligned_cols=81  Identities=22%  Similarity=0.276  Sum_probs=53.8

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      .++.+++|.|+++++|.+++..+.+.|++|+.+.++.++.+.+.+.+   +.. .+  .|..+.+..+.+. +...  +.
T Consensus       144 ~~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~---g~~-~~--~~~~~~~~~~~v~-~~~~--~~  214 (329)
T cd05288         144 KPGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEEL---GFD-AA--INYKTPDLAEALK-EAAP--DG  214 (329)
T ss_pred             CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhc---CCc-eE--EecCChhHHHHHH-Hhcc--CC
Confidence            35789999999999999999999999999999998887665543323   211 11  2222322222222 2221  46


Q ss_pred             ccEEEEcCCC
Q 022103          108 LDILVNNAGV  117 (302)
Q Consensus       108 id~lv~~aG~  117 (302)
                      +|+++.++|.
T Consensus       215 ~d~vi~~~g~  224 (329)
T cd05288         215 IDVYFDNVGG  224 (329)
T ss_pred             ceEEEEcchH
Confidence            9999988774

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=96.41  E-value=0.025  Score=52.00  Aligned_cols=50  Identities=22%  Similarity=0.219  Sum_probs=40.3

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecCh---hhHHHHHHHHhh
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGL-TVILTARDV---ERGQRAVESLSE   76 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~~---~~~~~~~~~l~~   76 (302)
                      .+.++|+++|.|+ ||-+++++-.|+..|+ +|.++.|+.   ++.+..++.+..
T Consensus       120 ~~~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~  173 (288)
T PRK12749        120 FDIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNE  173 (288)
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhh
Confidence            4578899999998 6669999999999997 799999995   466666666543

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=96.40  E-value=0.021  Score=53.20  Aligned_cols=117  Identities=20%  Similarity=0.180  Sum_probs=68.4

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCC--EEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCcc
Q 022103           32 IAIVTGANKGIGFALVKRLAELGL--TVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALD  109 (302)
Q Consensus        32 ~vlItGas~gIG~ala~~l~~~G~--~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id  109 (302)
                      .+.|+|++|.+|.++|..|+..+.  ++++++++.  .+..+..+.+......+..+.-.+  +       ..+.+...|
T Consensus         1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~--a~g~a~DL~~~~~~~~i~~~~~~~--~-------~~~~~~daD   69 (312)
T TIGR01772         1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAG--AAGVAADLSHIPTAASVKGFSGEE--G-------LENALKGAD   69 (312)
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCC--CcEEEchhhcCCcCceEEEecCCC--c-------hHHHcCCCC
Confidence            378999999999999999999875  799999876  111111222211111111101001  0       112234789


Q ss_pred             EEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCC
Q 022103          110 ILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRL  168 (302)
Q Consensus       110 ~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~  168 (302)
                      ++|.+||....+  .   +.-.+.+..|..    +.+.+.+.+.+....+.|+++|--.
T Consensus        70 ivvitaG~~~~~--g---~~R~dll~~N~~----I~~~i~~~i~~~~p~~iiivvsNPv  119 (312)
T TIGR01772        70 VVVIPAGVPRKP--G---MTRDDLFNVNAG----IVKDLVAAVAESCPKAMILVITNPV  119 (312)
T ss_pred             EEEEeCCCCCCC--C---ccHHHHHHHhHH----HHHHHHHHHHHhCCCeEEEEecCch
Confidence            999999986432  1   234455666665    5566666666554556677776544

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=96.38  E-value=0.021  Score=53.54  Aligned_cols=91  Identities=21%  Similarity=0.292  Sum_probs=63.2

Q ss_pred             CccccCCCCCccccccccc-ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEee
Q 022103            9 NYFSSSSSSSSLVSSTKWW-SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLD   87 (302)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~-~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~D   87 (302)
                      .++|...|..+...+  ++ -+|++++|+|++ |+|...++.....|++|++++|+.++++.+.+.    |.+   +..+
T Consensus       147 pllCaGiT~y~alk~--~~~~pG~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~l----GAd---~~i~  216 (339)
T COG1064         147 PLLCAGITTYRALKK--ANVKPGKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKLELAKKL----GAD---HVIN  216 (339)
T ss_pred             hhhcCeeeEeeehhh--cCCCCCCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHHHHHHHh----CCc---EEEE
Confidence            345666666666555  44 459999999998 999888877777899999999999887655443    222   2233


Q ss_pred             CCCHHHHHHHHHHHHhhCCCccEEEEcCC
Q 022103           88 VSDPSSIEAFVSWFKSNFAALDILVNNAG  116 (302)
Q Consensus        88 lt~~~~~~~~~~~~~~~~g~id~lv~~aG  116 (302)
                      .+|.+.++.+.+       .+|+++.+++
T Consensus       217 ~~~~~~~~~~~~-------~~d~ii~tv~  238 (339)
T COG1064         217 SSDSDALEAVKE-------IADAIIDTVG  238 (339)
T ss_pred             cCCchhhHHhHh-------hCcEEEECCC
Confidence            335554444333       2899999988

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=96.36  E-value=0.083  Score=49.16  Aligned_cols=113  Identities=16%  Similarity=0.219  Sum_probs=72.0

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHcCC--EEEEEecChhhHHHHHHHHhhCCC---ceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           31 TIAIVTGANKGIGFALVKRLAELGL--TVILTARDVERGQRAVESLSEKGL---PVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~G~--~V~l~~r~~~~~~~~~~~l~~~~~---~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      ..+.|+|+ |.+|..+|..|+..|.  ++++++.+.++++..+..+.....   ...+..  -+|.+++           
T Consensus         4 ~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~--~~dy~~~-----------   69 (312)
T cd05293           4 NKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEA--DKDYSVT-----------   69 (312)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEE--CCCHHHh-----------
Confidence            47899996 9999999999999874  699999988777766666654321   111221  1233322           


Q ss_pred             CCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecC
Q 022103          106 AALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISS  166 (302)
Q Consensus       106 g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS  166 (302)
                      ...|++|.+||....+  ..+.   .+.+..|..    +.+.+.+.+.+....+.++++|-
T Consensus        70 ~~adivvitaG~~~k~--g~~R---~dll~~N~~----i~~~~~~~i~~~~p~~~vivvsN  121 (312)
T cd05293          70 ANSKVVIVTAGARQNE--GESR---LDLVQRNVD----IFKGIIPKLVKYSPNAILLVVSN  121 (312)
T ss_pred             CCCCEEEECCCCCCCC--CCCH---HHHHHHHHH----HHHHHHHHHHHhCCCcEEEEccC
Confidence            3789999999986542  2333   334555543    45555555555444566676663

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=96.36  E-value=0.054  Score=52.71  Aligned_cols=119  Identities=10%  Similarity=0.063  Sum_probs=77.4

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHc-------CC--EEEEEecChhhHHHHHHHHhhCCCce-eEEEeeCCCHHHHHHH
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAEL-------GL--TVILTARDVERGQRAVESLSEKGLPV-NFFQLDVSDPSSIEAF   97 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~-------G~--~V~l~~r~~~~~~~~~~~l~~~~~~~-~~~~~Dlt~~~~~~~~   97 (302)
                      .+--.|.|+|++|.+|.++|..|+..       |.  ++++++++.++++..+-.+++.-..+ .-+..-..+.+++   
T Consensus        98 ~~~~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i~~~~ye~~---  174 (444)
T PLN00112         98 KKLINVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSIGIDPYEVF---  174 (444)
T ss_pred             CCCeEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEEecCCHHHh---
Confidence            34458999999999999999999988       65  79999999998888777776532110 0011001233332   


Q ss_pred             HHHHHhhCCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhc-CCCCCcEEEecC
Q 022103           98 VSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRR-SPSKSRILNISS  166 (302)
Q Consensus        98 ~~~~~~~~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~-~~~~~~iv~vsS  166 (302)
                              ...|++|..||....+  ..+   -.+.++.|..    +.+.+.+.+.+ ....+.||.+|-
T Consensus       175 --------kdaDiVVitAG~prkp--G~t---R~dLl~~N~~----I~k~i~~~I~~~a~p~~ivIVVsN  227 (444)
T PLN00112        175 --------QDAEWALLIGAKPRGP--GME---RADLLDINGQ----IFAEQGKALNEVASRNVKVIVVGN  227 (444)
T ss_pred             --------CcCCEEEECCCCCCCC--CCC---HHHHHHHHHH----HHHHHHHHHHHhcCCCeEEEEcCC
Confidence                    4789999999986432  233   3445666643    55556666665 335567777663

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=96.34  E-value=0.037  Score=48.58  Aligned_cols=36  Identities=28%  Similarity=0.339  Sum_probs=31.9

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGL-TVILTARD   63 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~   63 (302)
                      .+++++|+|.|+ ||+|..+++.|++.|. ++++++.+
T Consensus        25 ~L~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D   61 (212)
T PRK08644         25 KLKKAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFD   61 (212)
T ss_pred             HHhCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            467889999997 8899999999999997 49998887

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=96.30  E-value=0.041  Score=49.23  Aligned_cols=37  Identities=27%  Similarity=0.372  Sum_probs=31.5

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecCh
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGL-TVILTARDV   64 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~~   64 (302)
                      .+++.+|+|.|+ ||+|..+++.|++.|. ++++++.+.
T Consensus        21 ~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~   58 (240)
T TIGR02355        21 ALKASRVLIVGL-GGLGCAASQYLAAAGVGNLTLLDFDT   58 (240)
T ss_pred             HHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCc
Confidence            477889999988 7899999999999996 688877753

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=96.28  E-value=0.042  Score=48.63  Aligned_cols=82  Identities=20%  Similarity=0.313  Sum_probs=55.6

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecC-------------------hhhHHHHHHHHhhCCCc--eeEE
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGL-TVILTARD-------------------VERGQRAVESLSEKGLP--VNFF   84 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~-------------------~~~~~~~~~~l~~~~~~--~~~~   84 (302)
                      .+++++|+|.|+ ||+|.++|+.|++.|. ++++++.+                   ..|.+.+++.+++.++.  +..+
T Consensus        18 ~L~~~~VlivG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~   96 (228)
T cd00757          18 KLKNARVLVVGA-GGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAY   96 (228)
T ss_pred             HHhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEe
Confidence            477889999996 7899999999999997 67777543                   23455666666666554  4455


Q ss_pred             EeeCCCHHHHHHHHHHHHhhCCCccEEEEcCCC
Q 022103           85 QLDVSDPSSIEAFVSWFKSNFAALDILVNNAGV  117 (302)
Q Consensus        85 ~~Dlt~~~~~~~~~~~~~~~~g~id~lv~~aG~  117 (302)
                      ..+++ .+.+.++++       .+|++|.+...
T Consensus        97 ~~~i~-~~~~~~~~~-------~~DvVi~~~d~  121 (228)
T cd00757          97 NERLD-AENAEELIA-------GYDLVLDCTDN  121 (228)
T ss_pred             cceeC-HHHHHHHHh-------CCCEEEEcCCC
Confidence            55553 333443333       57888887654

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=96.26  E-value=0.033  Score=47.32  Aligned_cols=47  Identities=21%  Similarity=0.195  Sum_probs=38.7

Q ss_pred             cccccccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHH
Q 022103           21 VSSTKWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQ   68 (302)
Q Consensus        21 ~~~~~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~   68 (302)
                      .......+.|+++.|.|. |.||+++|+.|...|++|+..+|+.....
T Consensus        27 ~~~~~~~l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~~~   73 (178)
T PF02826_consen   27 ERFPGRELRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKPEE   73 (178)
T ss_dssp             TTTTBS-STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHHHH
T ss_pred             cCCCccccCCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCChhh
Confidence            344456799999999988 77999999999999999999999986544

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=96.24  E-value=0.027  Score=52.29  Aligned_cols=73  Identities=22%  Similarity=0.345  Sum_probs=54.6

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcC-CEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELG-LTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G-~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      +.+++++|.|+ |.+|+.+++.|...| .+|++++|+.++..+.++++..     ..+     +.+++.+.+.       
T Consensus       176 l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g~-----~~~-----~~~~~~~~l~-------  237 (311)
T cd05213         176 LKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKELGG-----NAV-----PLDELLELLN-------  237 (311)
T ss_pred             ccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcCC-----eEE-----eHHHHHHHHh-------
Confidence            68999999998 899999999999876 5799999999888777776531     111     2233333332       


Q ss_pred             CccEEEEcCCCC
Q 022103          107 ALDILVNNAGVS  118 (302)
Q Consensus       107 ~id~lv~~aG~~  118 (302)
                      ..|++|.+.+..
T Consensus       238 ~aDvVi~at~~~  249 (311)
T cd05213         238 EADVVISATGAP  249 (311)
T ss_pred             cCCEEEECCCCC
Confidence            579999998874

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>PLN02602 lactate dehydrogenase

Probab=96.24  E-value=0.1  Score=49.35  Aligned_cols=113  Identities=16%  Similarity=0.220  Sum_probs=72.5

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHcCC--EEEEEecChhhHHHHHHHHhhCC---CceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           31 TIAIVTGANKGIGFALVKRLAELGL--TVILTARDVERGQRAVESLSEKG---LPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~G~--~V~l~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      +.+.|+|+ |.+|..+|..|+..|.  ++++++.+.++++..+..+.+..   ... -+.. -++.+++           
T Consensus        38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~-~i~~-~~dy~~~-----------  103 (350)
T PLN02602         38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRT-KILA-STDYAVT-----------  103 (350)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCC-EEEe-CCCHHHh-----------
Confidence            68999996 8899999999998874  69999998877776666665432   111 1111 1232322           


Q ss_pred             CCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecC
Q 022103          106 AALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISS  166 (302)
Q Consensus       106 g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS  166 (302)
                      ...|++|.+||....+  ..+.   .+.+..|.    -+.+.+.+.+.+....+.++++|-
T Consensus       104 ~daDiVVitAG~~~k~--g~tR---~dll~~N~----~I~~~i~~~I~~~~p~~ivivvtN  155 (350)
T PLN02602        104 AGSDLCIVTAGARQIP--GESR---LNLLQRNV----ALFRKIIPELAKYSPDTILLIVSN  155 (350)
T ss_pred             CCCCEEEECCCCCCCc--CCCH---HHHHHHHH----HHHHHHHHHHHHHCCCeEEEEecC
Confidence            3789999999986432  2333   33455443    345555555555545567777763

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.21  E-value=0.046  Score=51.78  Aligned_cols=55  Identities=22%  Similarity=0.244  Sum_probs=42.0

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecCh-------------------hhHHHHHHHHhhCCCce
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGL-TVILTARDV-------------------ERGQRAVESLSEKGLPV   81 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~~-------------------~~~~~~~~~l~~~~~~~   81 (302)
                      ..+++.+|+|.|+ ||+|..+++.|+..|. ++.+++.+.                   .|.+.+++.+.+.++.+
T Consensus        24 ~~L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v   98 (355)
T PRK05597         24 QSLFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDV   98 (355)
T ss_pred             HHHhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCc
Confidence            3477889999998 7899999999999997 688887753                   35556666666655443

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=96.19  E-value=0.059  Score=43.48  Aligned_cols=80  Identities=25%  Similarity=0.441  Sum_probs=54.2

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecC-------------------hhhHHHHHHHHhhCC--CceeEEEe
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELGL-TVILTARD-------------------VERGQRAVESLSEKG--LPVNFFQL   86 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~-------------------~~~~~~~~~~l~~~~--~~~~~~~~   86 (302)
                      ++++++|.|+ |++|..+++.|++.|. ++++++.+                   ..|.+.+.+.+.+.+  .++..+..
T Consensus         1 r~~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~   79 (135)
T PF00899_consen    1 RNKRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPE   79 (135)
T ss_dssp             HT-EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEES
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeec
Confidence            3578999998 7799999999999998 68888763                   224445555665544  35566666


Q ss_pred             eCCCHHHHHHHHHHHHhhCCCccEEEEcCCC
Q 022103           87 DVSDPSSIEAFVSWFKSNFAALDILVNNAGV  117 (302)
Q Consensus        87 Dlt~~~~~~~~~~~~~~~~g~id~lv~~aG~  117 (302)
                      ++ +.+...++++       ..|++|.+...
T Consensus        80 ~~-~~~~~~~~~~-------~~d~vi~~~d~  102 (135)
T PF00899_consen   80 KI-DEENIEELLK-------DYDIVIDCVDS  102 (135)
T ss_dssp             HC-SHHHHHHHHH-------TSSEEEEESSS
T ss_pred             cc-cccccccccc-------CCCEEEEecCC
Confidence            66 3444555553       57888877543

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=96.18  E-value=0.023  Score=55.10  Aligned_cols=59  Identities=25%  Similarity=0.330  Sum_probs=44.4

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHH
Q 022103           32 IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEA   96 (302)
Q Consensus        32 ~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~   96 (302)
                      .++|.|+ |.+|+++++.|.++|+.|++++++.++.+...+..     .+.++.+|.++...+.+
T Consensus         2 ~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~~~-----~~~~~~gd~~~~~~l~~   60 (453)
T PRK09496          2 KIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQDRL-----DVRTVVGNGSSPDVLRE   60 (453)
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhhc-----CEEEEEeCCCCHHHHHH
Confidence            5788887 89999999999999999999999988766543311     35566667666554443

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.17  E-value=0.014  Score=49.30  Aligned_cols=43  Identities=16%  Similarity=0.075  Sum_probs=37.2

Q ss_pred             ccccccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecCh
Q 022103           22 SSTKWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDV   64 (302)
Q Consensus        22 ~~~~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~   64 (302)
                      .....++.+|+++|.|++.-+|..+++.|.++|++|.++.|+.
T Consensus        36 ~~~~~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~   78 (168)
T cd01080          36 KRYGIDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKT   78 (168)
T ss_pred             HHcCCCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCc
Confidence            3334579999999999977789999999999999999999874

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=96.14  E-value=0.017  Score=53.30  Aligned_cols=43  Identities=23%  Similarity=0.253  Sum_probs=37.6

Q ss_pred             cccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHH
Q 022103           25 KWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQ   68 (302)
Q Consensus        25 ~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~   68 (302)
                      ...+.+++++|.|. |++|+.++..|.+.|++|++++|+.++.+
T Consensus       147 ~~~l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~  189 (296)
T PRK08306        147 PITIHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHLA  189 (296)
T ss_pred             CCCCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHH
Confidence            35678999999998 67999999999999999999999976543

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=96.13  E-value=0.032  Score=51.27  Aligned_cols=80  Identities=20%  Similarity=0.205  Sum_probs=53.0

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      .+|.+++|.||+|++|..+++.+...|++|+.+.++.++.+.+.+ +   |.+ .+  .|..+.+ +.+.+.+...  +.
T Consensus       142 ~~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~-~---Ga~-~v--i~~~~~~-~~~~v~~~~~--~g  211 (329)
T cd08294         142 KAGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKE-L---GFD-AV--FNYKTVS-LEEALKEAAP--DG  211 (329)
T ss_pred             CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-c---CCC-EE--EeCCCcc-HHHHHHHHCC--CC
Confidence            357899999999999999988888889999999988877555433 3   322 12  2333322 2222222221  36


Q ss_pred             ccEEEEcCCC
Q 022103          108 LDILVNNAGV  117 (302)
Q Consensus       108 id~lv~~aG~  117 (302)
                      +|+++.+.|.
T Consensus       212 vd~vld~~g~  221 (329)
T cd08294         212 IDCYFDNVGG  221 (329)
T ss_pred             cEEEEECCCH
Confidence            8999988774

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=96.12  E-value=0.057  Score=50.19  Aligned_cols=117  Identities=23%  Similarity=0.186  Sum_probs=67.4

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCC--EEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCcc
Q 022103           32 IAIVTGANKGIGFALVKRLAELGL--TVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALD  109 (302)
Q Consensus        32 ~vlItGas~gIG~ala~~l~~~G~--~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id  109 (302)
                      .+.|+|++|.+|.++|..|+..|.  ++++++.+  +.+..+..+.+......+.... .+ +++       .+.+...|
T Consensus         2 KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~--~a~g~alDL~~~~~~~~i~~~~-~~-~~~-------y~~~~daD   70 (310)
T cd01337           2 KVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV--NTPGVAADLSHINTPAKVTGYL-GP-EEL-------KKALKGAD   70 (310)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC--ccceeehHhHhCCCcceEEEec-CC-Cch-------HHhcCCCC
Confidence            578999999999999999998884  79999987  4333333343321111111110 11 001       11224789


Q ss_pred             EEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCC
Q 022103          110 ILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRL  168 (302)
Q Consensus       110 ~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~  168 (302)
                      ++|.+||....+  ..+   -.+.++.|..-...+.+.    +.+....+.|+++|--.
T Consensus        71 ivvitaG~~~k~--g~t---R~dll~~N~~i~~~i~~~----i~~~~p~a~vivvtNPv  120 (310)
T cd01337          71 VVVIPAGVPRKP--GMT---RDDLFNINAGIVRDLATA----VAKACPKALILIISNPV  120 (310)
T ss_pred             EEEEeCCCCCCC--CCC---HHHHHHHHHHHHHHHHHH----HHHhCCCeEEEEccCch
Confidence            999999986432  223   445566665544444444    44433456677666543

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=96.11  E-value=0.069  Score=49.62  Aligned_cols=113  Identities=20%  Similarity=0.265  Sum_probs=67.6

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCC--EEEEEecCh--hhHHHHHHHHhhC----CCceeEEEeeCC-CHHHHHHHHHHHH
Q 022103           32 IAIVTGANKGIGFALVKRLAELGL--TVILTARDV--ERGQRAVESLSEK----GLPVNFFQLDVS-DPSSIEAFVSWFK  102 (302)
Q Consensus        32 ~vlItGas~gIG~ala~~l~~~G~--~V~l~~r~~--~~~~~~~~~l~~~----~~~~~~~~~Dlt-~~~~~~~~~~~~~  102 (302)
                      ++.|+|++|.+|..++..|+..|.  +|++++|..  ++++.....+.+.    +...   ....+ |.++         
T Consensus         2 kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~---~i~~~~d~~~---------   69 (309)
T cd05294           2 KVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDA---EIKISSDLSD---------   69 (309)
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCCc---EEEECCCHHH---------
Confidence            589999999999999999999986  499999954  4444333333221    1111   11111 2221         


Q ss_pred             hhCCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCC
Q 022103          103 SNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSR  167 (302)
Q Consensus       103 ~~~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~  167 (302)
                        +...|++|.++|....+  ..+   -.+.+..|..-...+.+.+.+.    ...+.||++++.
T Consensus        70 --l~~aDiViitag~p~~~--~~~---r~dl~~~n~~i~~~~~~~i~~~----~~~~~viv~~np  123 (309)
T cd05294          70 --VAGSDIVIITAGVPRKE--GMS---RLDLAKKNAKIVKKYAKQIAEF----APDTKILVVTNP  123 (309)
T ss_pred             --hCCCCEEEEecCCCCCC--CCC---HHHHHHHHHHHHHHHHHHHHHH----CCCeEEEEeCCc
Confidence              13789999999985431  223   2344555555444444444433    245677777764

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=96.10  E-value=0.034  Score=43.30  Aligned_cols=71  Identities=28%  Similarity=0.383  Sum_probs=52.8

Q ss_pred             EEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCccEEE
Q 022103           33 AIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDILV  112 (302)
Q Consensus        33 vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id~lv  112 (302)
                      ++|.|. |.+|+.+++.|.+.+.+|++++++++..+...+    .+  +.++.+|.++++.++++--      .+.+.++
T Consensus         1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~----~~--~~~i~gd~~~~~~l~~a~i------~~a~~vv   67 (116)
T PF02254_consen    1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEELRE----EG--VEVIYGDATDPEVLERAGI------EKADAVV   67 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHH----TT--SEEEES-TTSHHHHHHTTG------GCESEEE
T ss_pred             eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHHHHh----cc--cccccccchhhhHHhhcCc------cccCEEE
Confidence            577787 579999999999987799999999877554433    23  6799999999998765422      3677777


Q ss_pred             EcCC
Q 022103          113 NNAG  116 (302)
Q Consensus       113 ~~aG  116 (302)
                      ....
T Consensus        68 ~~~~   71 (116)
T PF02254_consen   68 ILTD   71 (116)
T ss_dssp             EESS
T ss_pred             EccC
Confidence            7665

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=96.07  E-value=0.074  Score=49.74  Aligned_cols=112  Identities=15%  Similarity=0.128  Sum_probs=69.2

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHcCC-------EEEEEecCh--hhHHHHHHHHhhCC-C---ceeEEEeeCCCHHHHHHH
Q 022103           31 TIAIVTGANKGIGFALVKRLAELGL-------TVILTARDV--ERGQRAVESLSEKG-L---PVNFFQLDVSDPSSIEAF   97 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~G~-------~V~l~~r~~--~~~~~~~~~l~~~~-~---~~~~~~~Dlt~~~~~~~~   97 (302)
                      -.+.|+|++|.+|..+|..|+..|.       ++++++...  ++++..+..+.+.. .   ... +.  -.+.++    
T Consensus         4 ~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~-i~--~~~~~~----   76 (323)
T TIGR01759         4 VRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVV-AT--TDPEEA----   76 (323)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcE-Ee--cChHHH----
Confidence            3689999999999999999998884       799999864  33555554444322 0   111 11  112222    


Q ss_pred             HHHHHhhCCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCC-CCcEEEec
Q 022103           98 VSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPS-KSRILNIS  165 (302)
Q Consensus        98 ~~~~~~~~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~-~~~iv~vs  165 (302)
                             +...|++|.+||....+  ..+   ..+.+..|..    +.+.+.+.+.+... .+.++++|
T Consensus        77 -------~~daDvVVitAG~~~k~--g~t---R~dll~~Na~----i~~~i~~~i~~~~~~~~iiivvs  129 (323)
T TIGR01759        77 -------FKDVDAALLVGAFPRKP--GME---RADLLSKNGK----IFKEQGKALNKVAKKDVKVLVVG  129 (323)
T ss_pred             -------hCCCCEEEEeCCCCCCC--CCc---HHHHHHHHHH----HHHHHHHHHHhhCCCCeEEEEeC
Confidence                   24789999999986432  233   4445666654    45555555555433 56677766

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=96.06  E-value=0.044  Score=49.67  Aligned_cols=81  Identities=19%  Similarity=0.291  Sum_probs=53.7

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      .++++++|+|+++++|.+++..+...|++|+++.++.++.+.. .+.   +.+   ...+..+.+....+.....  ...
T Consensus       138 ~~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~---g~~---~~~~~~~~~~~~~~~~~~~--~~~  208 (325)
T TIGR02824       138 KAGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAAC-EAL---GAD---IAINYREEDFVEVVKAETG--GKG  208 (325)
T ss_pred             CCCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc---CCc---EEEecCchhHHHHHHHHcC--CCC
Confidence            3578999999999999999999999999999999988766533 332   221   1122333333333222221  135


Q ss_pred             ccEEEEcCCC
Q 022103          108 LDILVNNAGV  117 (302)
Q Consensus       108 id~lv~~aG~  117 (302)
                      +|.+++++|.
T Consensus       209 ~d~~i~~~~~  218 (325)
T TIGR02824       209 VDVILDIVGG  218 (325)
T ss_pred             eEEEEECCch
Confidence            9999998873

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.05  E-value=0.06  Score=52.87  Aligned_cols=79  Identities=20%  Similarity=0.130  Sum_probs=54.2

Q ss_pred             cccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChh-hHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHh
Q 022103           25 KWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVE-RGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKS  103 (302)
Q Consensus        25 ~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~-~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~  103 (302)
                      ....++++|+|.|+ |++|.++|+.|.++|++|++++++.. ......+.+.+.|  +.++..+-..             
T Consensus        11 ~~~~~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~g--v~~~~~~~~~-------------   74 (480)
T PRK01438         11 HSDWQGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAILEALG--ATVRLGPGPT-------------   74 (480)
T ss_pred             ccCcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHcC--CEEEECCCcc-------------
Confidence            33467889999997 77999999999999999999986643 3334445565544  3333322111             


Q ss_pred             hCCCccEEEEcCCCCC
Q 022103          104 NFAALDILVNNAGVSF  119 (302)
Q Consensus       104 ~~g~id~lv~~aG~~~  119 (302)
                      .....|.+|...|+.+
T Consensus        75 ~~~~~D~Vv~s~Gi~~   90 (480)
T PRK01438         75 LPEDTDLVVTSPGWRP   90 (480)
T ss_pred             ccCCCCEEEECCCcCC
Confidence            0135899999999864

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=96.02  E-value=0.014  Score=57.20  Aligned_cols=78  Identities=19%  Similarity=0.185  Sum_probs=54.1

Q ss_pred             cccCcEEEEeCC----------------CchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCC
Q 022103           27 WSKETIAIVTGA----------------NKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSD   90 (302)
Q Consensus        27 ~~~~k~vlItGa----------------s~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~   90 (302)
                      +++||+||||+|                ||-.|.++|+++..+|++|+++.-... +.        ....+.++.  +..
T Consensus       253 ~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~-~~--------~p~~v~~i~--V~t  321 (475)
T PRK13982        253 PLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVD-LA--------DPQGVKVIH--VES  321 (475)
T ss_pred             ccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcC-CC--------CCCCceEEE--ecC
Confidence            489999999998                578999999999999999999874331 10        112344443  334


Q ss_pred             HHHHHHHHHHHHhhCCCccEEEEcCCCCC
Q 022103           91 PSSIEAFVSWFKSNFAALDILVNNAGVSF  119 (302)
Q Consensus        91 ~~~~~~~~~~~~~~~g~id~lv~~aG~~~  119 (302)
                      -+++.   +.+.+.+. .|++|++|.+..
T Consensus       322 a~eM~---~av~~~~~-~Di~I~aAAVaD  346 (475)
T PRK13982        322 ARQML---AAVEAALP-ADIAIFAAAVAD  346 (475)
T ss_pred             HHHHH---HHHHhhCC-CCEEEEeccccc
Confidence            44444   44444444 699999999864

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=96.02  E-value=0.017  Score=56.92  Aligned_cols=48  Identities=17%  Similarity=0.193  Sum_probs=41.5

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHH
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESL   74 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l   74 (302)
                      .++++++++|+|+ ||+|++++..|++.|++|++++|+.++.+...+++
T Consensus       328 ~~~~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~~  375 (477)
T PRK09310        328 IPLNNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALASRC  375 (477)
T ss_pred             CCcCCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh
Confidence            4567899999996 79999999999999999999999988877666554

>PRK08223 hypothetical protein; Validated

Probab=96.00  E-value=0.045  Score=50.20  Aligned_cols=37  Identities=24%  Similarity=0.380  Sum_probs=31.8

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecCh
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGL-TVILTARDV   64 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~~   64 (302)
                      .+++.+|+|.|+ ||+|..+++.|++.|. ++.+++.+.
T Consensus        24 kL~~s~VlIvG~-GGLGs~va~~LA~aGVG~i~lvD~D~   61 (287)
T PRK08223         24 RLRNSRVAIAGL-GGVGGIHLLTLARLGIGKFTIADFDV   61 (287)
T ss_pred             HHhcCCEEEECC-CHHHHHHHHHHHHhCCCeEEEEeCCC
Confidence            477889999998 6899999999999997 688887753

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=95.97  E-value=0.062  Score=51.23  Aligned_cols=36  Identities=31%  Similarity=0.493  Sum_probs=31.4

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGL-TVILTARD   63 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~   63 (302)
                      .+++.+|+|.|+ ||+|..+++.|+..|. ++++++.+
T Consensus        38 ~l~~~~VliiG~-GglG~~v~~~La~~Gvg~i~ivD~D   74 (370)
T PRK05600         38 RLHNARVLVIGA-GGLGCPAMQSLASAGVGTITLIDDD   74 (370)
T ss_pred             HhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            367889999998 7899999999999997 78888775

>PRK08328 hypothetical protein; Provisional

Probab=95.92  E-value=0.089  Score=46.75  Aligned_cols=37  Identities=24%  Similarity=0.369  Sum_probs=31.5

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecCh
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGL-TVILTARDV   64 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~~   64 (302)
                      .+++++|+|.|+ ||+|.++++.|++.|. ++++++.+.
T Consensus        24 ~L~~~~VlIiG~-GGlGs~ia~~La~~Gvg~i~lvD~D~   61 (231)
T PRK08328         24 KLKKAKVAVVGV-GGLGSPVAYYLAAAGVGRILLIDEQT   61 (231)
T ss_pred             HHhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence            367889999998 6899999999999997 688887654

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=95.91  E-value=0.073  Score=46.28  Aligned_cols=37  Identities=24%  Similarity=0.361  Sum_probs=33.0

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecC
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGL-TVILTARD   63 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~   63 (302)
                      -.++.++|+|.|+ ||+|..+|..|++.|. ++++++++
T Consensus        17 ~~L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D   54 (200)
T TIGR02354        17 QKLEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFD   54 (200)
T ss_pred             HHHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            3477889999999 7799999999999998 69999887

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>cd00300 LDH_like L-lactate dehydrogenase-like enzymes

Probab=95.91  E-value=0.13  Score=47.61  Aligned_cols=111  Identities=22%  Similarity=0.233  Sum_probs=70.0

Q ss_pred             EEEeCCCchHHHHHHHHHHHcC--CEEEEEecChhhHHHHHHHHhhCCCc---eeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           33 AIVTGANKGIGFALVKRLAELG--LTVILTARDVERGQRAVESLSEKGLP---VNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        33 vlItGas~gIG~ala~~l~~~G--~~V~l~~r~~~~~~~~~~~l~~~~~~---~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      +.|.|+ |++|..+|..|+..|  .++++++++.++.+..+..+.+....   ..+...  ++.+++           ..
T Consensus         1 i~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~--~~~~~l-----------~~   66 (300)
T cd00300           1 ITIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRG--GDYADA-----------AD   66 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEEC--CCHHHh-----------CC
Confidence            357887 679999999999998  57999999998887777777653221   122211  222222           37


Q ss_pred             ccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecC
Q 022103          108 LDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISS  166 (302)
Q Consensus       108 id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS  166 (302)
                      .|++|.++|....+  ..+.   .+.+..|+    -+++.+.+.+.+....+.++++|.
T Consensus        67 aDiVIitag~p~~~--~~~R---~~l~~~n~----~i~~~~~~~i~~~~p~~~viv~sN  116 (300)
T cd00300          67 ADIVVITAGAPRKP--GETR---LDLINRNA----PILRSVITNLKKYGPDAIILVVSN  116 (300)
T ss_pred             CCEEEEcCCCCCCC--CCCH---HHHHHHHH----HHHHHHHHHHHHhCCCeEEEEccC
Confidence            89999999986432  2233   33444444    345555555555434566777663

Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=95.90  E-value=0.06  Score=45.71  Aligned_cols=32  Identities=31%  Similarity=0.406  Sum_probs=27.9

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCC-EEEEEecCh
Q 022103           32 IAIVTGANKGIGFALVKRLAELGL-TVILTARDV   64 (302)
Q Consensus        32 ~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~~   64 (302)
                      +|+|.|+ ||+|..+++.|++.|. ++++++.+.
T Consensus         1 ~VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D~   33 (174)
T cd01487           1 KVGIAGA-GGLGSNIAVLLARSGVGNLKLVDFDV   33 (174)
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            3788886 8899999999999998 599998875

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.90  E-value=0.14  Score=49.71  Aligned_cols=77  Identities=18%  Similarity=0.270  Sum_probs=51.4

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      +.+|+++|+|.+ ++|.++|+.|+++|++|++.+......  ...++.+....+.++..... ..    ..       ..
T Consensus         3 ~~~~~~~v~G~g-~~G~~~a~~l~~~g~~v~~~d~~~~~~--~~~~l~~~~~gi~~~~g~~~-~~----~~-------~~   67 (445)
T PRK04308          3 FQNKKILVAGLG-GTGISMIAYLRKNGAEVAAYDAELKPE--RVAQIGKMFDGLVFYTGRLK-DA----LD-------NG   67 (445)
T ss_pred             CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCCCch--hHHHHhhccCCcEEEeCCCC-HH----HH-------hC
Confidence            568899999985 899999999999999999998765431  12233332123444433222 11    11       25


Q ss_pred             ccEEEEcCCCCC
Q 022103          108 LDILVNNAGVSF  119 (302)
Q Consensus       108 id~lv~~aG~~~  119 (302)
                      .|.||...|+.+
T Consensus        68 ~d~vv~spgi~~   79 (445)
T PRK04308         68 FDILALSPGISE   79 (445)
T ss_pred             CCEEEECCCCCC
Confidence            799999999974

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=95.84  E-value=0.048  Score=51.52  Aligned_cols=83  Identities=23%  Similarity=0.268  Sum_probs=56.0

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      ...+|+.+||.||+||+|.+.++.....|+..+++.++.+.+ +..+.+..      -...|..+++-++.+.+..   .
T Consensus       154 ~~~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~-~l~k~lGA------d~vvdy~~~~~~e~~kk~~---~  223 (347)
T KOG1198|consen  154 KLSKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKL-ELVKKLGA------DEVVDYKDENVVELIKKYT---G  223 (347)
T ss_pred             ccCCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchH-HHHHHcCC------cEeecCCCHHHHHHHHhhc---C
Confidence            346788999999999999999998888895555555665443 34444432      2345666644333333322   4


Q ss_pred             CCccEEEEcCCCC
Q 022103          106 AALDILVNNAGVS  118 (302)
Q Consensus       106 g~id~lv~~aG~~  118 (302)
                      +.+|+|+-|+|..
T Consensus       224 ~~~DvVlD~vg~~  236 (347)
T KOG1198|consen  224 KGVDVVLDCVGGS  236 (347)
T ss_pred             CCccEEEECCCCC
Confidence            6899999999984

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=95.83  E-value=0.057  Score=48.97  Aligned_cols=80  Identities=19%  Similarity=0.302  Sum_probs=53.1

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCc
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAAL  108 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~i  108 (302)
                      ++++++|+|+++++|.+++..+...|++|+++.++.++.+.. .+.   +.. .++  |.........+.+....  ..+
T Consensus       144 ~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~---g~~-~~~--~~~~~~~~~~~~~~~~~--~~~  214 (328)
T cd08268         144 PGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDAL-LAL---GAA-HVI--VTDEEDLVAEVLRITGG--KGV  214 (328)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHc---CCC-EEE--ecCCccHHHHHHHHhCC--CCc
Confidence            578999999999999999999999999999999988766554 322   221 222  22222222222222211  259


Q ss_pred             cEEEEcCCC
Q 022103          109 DILVNNAGV  117 (302)
Q Consensus       109 d~lv~~aG~  117 (302)
                      |.+++++|.
T Consensus       215 d~vi~~~~~  223 (328)
T cd08268         215 DVVFDPVGG  223 (328)
T ss_pred             eEEEECCch
Confidence            999998874

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases

Probab=95.83  E-value=0.13  Score=47.77  Aligned_cols=111  Identities=21%  Similarity=0.257  Sum_probs=72.2

Q ss_pred             EEEeCCCchHHHHHHHHHHHcCC--EEEEEecChhhHHHHHHHHhhCC-----CceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           33 AIVTGANKGIGFALVKRLAELGL--TVILTARDVERGQRAVESLSEKG-----LPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        33 vlItGas~gIG~ala~~l~~~G~--~V~l~~r~~~~~~~~~~~l~~~~-----~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      +.|.|+ |.+|..+|..|+.+|.  ++++++.+.++.+..+..+.+..     .++.+..   .+.+++           
T Consensus         2 i~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~---~~y~~~-----------   66 (307)
T cd05290           2 LVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRA---GDYDDC-----------   66 (307)
T ss_pred             EEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEE---CCHHHh-----------
Confidence            678898 8999999999999875  69999998877766666665421     1233332   233332           


Q ss_pred             CCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEec
Q 022103          106 AALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNIS  165 (302)
Q Consensus       106 g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vs  165 (302)
                      ...|++|.+||....+  ..+. +-.+.+..|    ..+.+.+.+.+.+....+.++.+|
T Consensus        67 ~~aDivvitaG~~~kp--g~tr-~R~dll~~N----~~I~~~i~~~i~~~~p~~i~ivvs  119 (307)
T cd05290          67 ADADIIVITAGPSIDP--GNTD-DRLDLAQTN----AKIIREIMGNITKVTKEAVIILIT  119 (307)
T ss_pred             CCCCEEEECCCCCCCC--CCCc-hHHHHHHHH----HHHHHHHHHHHHHhCCCeEEEEec
Confidence            3789999999986432  2231 123445555    346666677666664456666665

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.83  E-value=0.033  Score=51.06  Aligned_cols=41  Identities=17%  Similarity=0.113  Sum_probs=36.4

Q ss_pred             cccccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecC
Q 022103           23 STKWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARD   63 (302)
Q Consensus        23 ~~~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~   63 (302)
                      .+...++||.|+|.|.++-+|+.++..|.++|++|.++.|.
T Consensus       152 ~~~i~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~  192 (283)
T PRK14192        152 AYNIELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSR  192 (283)
T ss_pred             HcCCCCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCC
Confidence            34567899999999998889999999999999999988774

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=95.82  E-value=0.031  Score=45.05  Aligned_cols=89  Identities=20%  Similarity=0.231  Sum_probs=54.3

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcCCEEEEE-ecChhhHHHHHHHHhhC--------CCceeEEEeeCCCHHHHHHHHH
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELGLTVILT-ARDVERGQRAVESLSEK--------GLPVNFFQLDVSDPSSIEAFVS   99 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G~~V~l~-~r~~~~~~~~~~~l~~~--------~~~~~~~~~Dlt~~~~~~~~~~   99 (302)
                      ..-++-|.|+ |-+|.++++.|.+.|+.|..+ +|+.+..++....+...        -.+...+-.-+.|. .+.++++
T Consensus         9 ~~l~I~iIGa-GrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~~~~~~~aDlv~iavpDd-aI~~va~   86 (127)
T PF10727_consen    9 ARLKIGIIGA-GRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDLEEILRDADLVFIAVPDD-AIAEVAE   86 (127)
T ss_dssp             ---EEEEECT-SCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----TTGGGCC-SEEEE-S-CC-HHHHHHH
T ss_pred             CccEEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCCcccccccccccccccccccccccccCCEEEEEechH-HHHHHHH
Confidence            3457889998 669999999999999998877 46665656555554321        11234444445555 5888888


Q ss_pred             HHHhh--CCCccEEEEcCCCCC
Q 022103          100 WFKSN--FAALDILVNNAGVSF  119 (302)
Q Consensus       100 ~~~~~--~g~id~lv~~aG~~~  119 (302)
                      ++...  ..+=.+++|++|...
T Consensus        87 ~La~~~~~~~g~iVvHtSGa~~  108 (127)
T PF10727_consen   87 QLAQYGAWRPGQIVVHTSGALG  108 (127)
T ss_dssp             HHHCC--S-TT-EEEES-SS--
T ss_pred             HHHHhccCCCCcEEEECCCCCh
Confidence            88875  333468999999753

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A

Probab=95.82  E-value=0.016  Score=42.15  Aligned_cols=32  Identities=25%  Similarity=0.398  Sum_probs=22.7

Q ss_pred             cEEEEeCCCchHHHH--HHHHHHHcCCEEEEEecC
Q 022103           31 TIAIVTGANKGIGFA--LVKRLAELGLTVILTARD   63 (302)
Q Consensus        31 k~vlItGas~gIG~a--la~~l~~~G~~V~l~~r~   63 (302)
                      |+|||+|+|+|.|++  ++.+| ..|++.+.+...
T Consensus        40 K~VLViGaStGyGLAsRIa~aF-g~gA~TiGV~fE   73 (78)
T PF12242_consen   40 KKVLVIGASTGYGLASRIAAAF-GAGADTIGVSFE   73 (78)
T ss_dssp             SEEEEES-SSHHHHHHHHHHHH-CC--EEEEEE--
T ss_pred             ceEEEEecCCcccHHHHHHHHh-cCCCCEEEEeec
Confidence            899999999999999  66666 568888877654

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=95.75  E-value=0.11  Score=43.64  Aligned_cols=45  Identities=24%  Similarity=0.279  Sum_probs=33.3

Q ss_pred             cccccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHH
Q 022103           23 STKWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQ   68 (302)
Q Consensus        23 ~~~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~   68 (302)
                      .+..-+.||+++|.|- |-+|+.+|+.|...|++|+++..++-+.-
T Consensus        16 ~t~~~l~Gk~vvV~GY-G~vG~g~A~~lr~~Ga~V~V~e~DPi~al   60 (162)
T PF00670_consen   16 ATNLMLAGKRVVVIGY-GKVGKGIARALRGLGARVTVTEIDPIRAL   60 (162)
T ss_dssp             HH-S--TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHHH
T ss_pred             cCceeeCCCEEEEeCC-CcccHHHHHHHhhCCCEEEEEECChHHHH
Confidence            4566789999999998 67999999999999999999999985543

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=95.74  E-value=0.29  Score=45.39  Aligned_cols=110  Identities=16%  Similarity=0.267  Sum_probs=66.2

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcC--CEEEEEecChhhHHHHHHHHhhCC---CceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           32 IAIVTGANKGIGFALVKRLAELG--LTVILTARDVERGQRAVESLSEKG---LPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        32 ~vlItGas~gIG~ala~~l~~~G--~~V~l~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      .+.|.|+ |.+|..+|..|+.+|  .+|++++++.++.+..+..+....   .......   ++.++           +.
T Consensus         2 kI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~~---~d~~~-----------l~   66 (308)
T cd05292           2 KVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIYA---GDYAD-----------CK   66 (308)
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEee---CCHHH-----------hC
Confidence            3788898 889999999999999  589999999877664444444321   1111111   23222           24


Q ss_pred             CccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEec
Q 022103          107 ALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNIS  165 (302)
Q Consensus       107 ~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vs  165 (302)
                      ..|++|.++|....+  ..+   ..+.+..|..    +.+.+.+.+.+....+.+++++
T Consensus        67 ~aDiViita~~~~~~--~~~---r~dl~~~n~~----i~~~~~~~l~~~~~~giiiv~t  116 (308)
T cd05292          67 GADVVVITAGANQKP--GET---RLDLLKRNVA----IFKEIIPQILKYAPDAILLVVT  116 (308)
T ss_pred             CCCEEEEccCCCCCC--CCC---HHHHHHHHHH----HHHHHHHHHHHHCCCeEEEEec
Confidence            789999999986432  122   2334444443    4444444444433446666664

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=95.74  E-value=0.18  Score=47.05  Aligned_cols=119  Identities=14%  Similarity=0.156  Sum_probs=69.1

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHhh----CCCceeEEEeeCCCHHHHHHHHHHHHh
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELGL-TVILTARDVERGQRAVESLSE----KGLPVNFFQLDVSDPSSIEAFVSWFKS  103 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~----~~~~~~~~~~Dlt~~~~~~~~~~~~~~  103 (302)
                      +.+.+.|.|+ |.+|..+|..++..|. .|++++.+++..+.....+..    .+....+..  .+|.+++         
T Consensus         5 ~~~KI~IIGa-G~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~--~~d~~~l---------   72 (321)
T PTZ00082          5 KRRKISLIGS-GNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIG--TNNYEDI---------   72 (321)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEE--CCCHHHh---------
Confidence            3468999995 7799999999999995 899999998754322221111    111222221  1232222         


Q ss_pred             hCCCccEEEEcCCCCCCC-CCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecC
Q 022103          104 NFAALDILVNNAGVSFND-IYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISS  166 (302)
Q Consensus       104 ~~g~id~lv~~aG~~~~~-~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS  166 (302)
                        ...|++|.++|....+ ..+.+. ...+.+..|+    -+.+.+.+.|.+....+.++++|-
T Consensus        73 --~~aDiVI~tag~~~~~~~~~~~~-~r~~~l~~n~----~i~~~i~~~i~~~~p~a~~iv~sN  129 (321)
T PTZ00082         73 --AGSDVVIVTAGLTKRPGKSDKEW-NRDDLLPLNA----KIMDEVAEGIKKYCPNAFVIVITN  129 (321)
T ss_pred             --CCCCEEEECCCCCCCCCCCcCCC-CHHHHHHHHH----HHHHHHHHHHHHHCCCeEEEEecC
Confidence              3689999999986432 111111 1233445553    356666666666534456666663

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=95.71  E-value=0.25  Score=49.02  Aligned_cols=84  Identities=23%  Similarity=0.310  Sum_probs=57.4

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCC-------------CHHHH
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVS-------------DPSSI   94 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt-------------~~~~~   94 (302)
                      .++.+++|.|+ |.+|...+..+...|++|++++++.++++.... +   +  ..++..|..             ..+..
T Consensus       162 vp~akVlViGa-G~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~~-l---G--a~~v~v~~~e~g~~~~gYa~~~s~~~~  234 (511)
T TIGR00561       162 VPPAKVLVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQS-M---G--AEFLELDFKEEGGSGDGYAKVMSEEFI  234 (511)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c---C--CeEEeccccccccccccceeecCHHHH
Confidence            45689999997 889999999999999999999999887553332 3   2  233334432             12333


Q ss_pred             HHHHHHHHhhCCCccEEEEcCCCC
Q 022103           95 EAFVSWFKSNFAALDILVNNAGVS  118 (302)
Q Consensus        95 ~~~~~~~~~~~g~id~lv~~aG~~  118 (302)
                      +...+.+.+.....|++|+++-+.
T Consensus       235 ~~~~~~~~e~~~~~DIVI~Talip  258 (511)
T TIGR00561       235 AAEMELFAAQAKEVDIIITTALIP  258 (511)
T ss_pred             HHHHHHHHHHhCCCCEEEECcccC
Confidence            333444444556799999999554

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=95.70  E-value=0.071  Score=49.77  Aligned_cols=77  Identities=14%  Similarity=0.256  Sum_probs=51.4

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGL-TVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      .++++++|+|+ |++|...+..+...|+ +|++++++.++++.+ +++   |... +  .|..+. ++.++.    ...+
T Consensus       168 ~~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a-~~l---Ga~~-v--i~~~~~-~~~~~~----~~~g  234 (343)
T PRK09880        168 LQGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLA-REM---GADK-L--VNPQND-DLDHYK----AEKG  234 (343)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHH-HHc---CCcE-E--ecCCcc-cHHHHh----ccCC
Confidence            36889999986 8999999988888898 588899998776543 334   3222 1  233332 222222    2224


Q ss_pred             CccEEEEcCCC
Q 022103          107 ALDILVNNAGV  117 (302)
Q Consensus       107 ~id~lv~~aG~  117 (302)
                      .+|+++.++|.
T Consensus       235 ~~D~vid~~G~  245 (343)
T PRK09880        235 YFDVSFEVSGH  245 (343)
T ss_pred             CCCEEEECCCC
Confidence            69999999885

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=95.67  E-value=0.063  Score=52.08  Aligned_cols=78  Identities=23%  Similarity=0.265  Sum_probs=59.5

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      ...+.++|.|+ |.+|+.+++.|.+.|++|+++++++++.+...++    +..+.++.+|.++.+.+++.-      ...
T Consensus       229 ~~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~----~~~~~~i~gd~~~~~~L~~~~------~~~  297 (453)
T PRK09496        229 KPVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAEE----LPNTLVLHGDGTDQELLEEEG------IDE  297 (453)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH----CCCCeEEECCCCCHHHHHhcC------Ccc
Confidence            35688999999 8899999999999999999999998776655443    235678899999988764432      236


Q ss_pred             ccEEEEcCC
Q 022103          108 LDILVNNAG  116 (302)
Q Consensus       108 id~lv~~aG  116 (302)
                      .|.++.+.+
T Consensus       298 a~~vi~~~~  306 (453)
T PRK09496        298 ADAFIALTN  306 (453)
T ss_pred             CCEEEECCC
Confidence            777775544

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=95.63  E-value=0.065  Score=57.26  Aligned_cols=78  Identities=24%  Similarity=0.363  Sum_probs=62.0

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHc-CCE-------------EEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHH
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAEL-GLT-------------VILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSS   93 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~-G~~-------------V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~   93 (302)
                      .+.|.|+|.|+ |.||+..++.|++. +++             |.+.+++.++.+.+++...    .+.++.+|++|.++
T Consensus       567 ~~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~----~~~~v~lDv~D~e~  641 (1042)
T PLN02819        567 KKSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIE----NAEAVQLDVSDSES  641 (1042)
T ss_pred             ccCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhcC----CCceEEeecCCHHH
Confidence            34678999998 88999999999986 334             8888999887777666542    46789999999998


Q ss_pred             HHHHHHHHHhhCCCccEEEEcCCC
Q 022103           94 IEAFVSWFKSNFAALDILVNNAGV  117 (302)
Q Consensus        94 ~~~~~~~~~~~~g~id~lv~~aG~  117 (302)
                      +.++++       .+|+||.+...
T Consensus       642 L~~~v~-------~~DaVIsalP~  658 (1042)
T PLN02819        642 LLKYVS-------QVDVVISLLPA  658 (1042)
T ss_pred             HHHhhc-------CCCEEEECCCc
Confidence            877766       48999998754

>PRK04148 hypothetical protein; Provisional

Probab=95.59  E-value=0.038  Score=44.90  Aligned_cols=56  Identities=25%  Similarity=0.345  Sum_probs=44.5

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHH
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPS   92 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~   92 (302)
                      +++.+++.|.+  -|.++|..|++.|++|++++.++...+.+.+.      .+.++..|+.++.
T Consensus        16 ~~~kileIG~G--fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~~------~~~~v~dDlf~p~   71 (134)
T PRK04148         16 KNKKIVELGIG--FYFKVAKKLKESGFDVIVIDINEKAVEKAKKL------GLNAFVDDLFNPN   71 (134)
T ss_pred             cCCEEEEEEec--CCHHHHHHHHHCCCEEEEEECCHHHHHHHHHh------CCeEEECcCCCCC
Confidence            45789999987  78888999999999999999999865544332      3578888888654

>PRK05442 malate dehydrogenase; Provisional

Probab=95.56  E-value=0.081  Score=49.55  Aligned_cols=113  Identities=15%  Similarity=0.132  Sum_probs=68.4

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHcCC-------EEEEEecChh--hHHHHHHHHhhCC----CceeEEEeeCCCHHHHHHH
Q 022103           31 TIAIVTGANKGIGFALVKRLAELGL-------TVILTARDVE--RGQRAVESLSEKG----LPVNFFQLDVSDPSSIEAF   97 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~G~-------~V~l~~r~~~--~~~~~~~~l~~~~----~~~~~~~~Dlt~~~~~~~~   97 (302)
                      +.+.|+|++|.+|..+|..|+..|.       ++++++....  +++..+..+.+..    ..+.+ ..  .+.+     
T Consensus         5 ~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i-~~--~~y~-----   76 (326)
T PRK05442          5 VRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVVI-TD--DPNV-----   76 (326)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcEE-ec--ChHH-----
Confidence            5789999999999999999998764       7999998543  3343333333221    11111 10  1112     


Q ss_pred             HHHHHhhCCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhc-CCCCCcEEEecC
Q 022103           98 VSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRR-SPSKSRILNISS  166 (302)
Q Consensus        98 ~~~~~~~~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~-~~~~~~iv~vsS  166 (302)
                            .+...|++|.+||....+  .   +.-.+.+..|.    .+.+.+.+.+.+ .+..+.++.+|-
T Consensus        77 ------~~~daDiVVitaG~~~k~--g---~tR~dll~~Na----~i~~~i~~~i~~~~~~~~iiivvsN  131 (326)
T PRK05442         77 ------AFKDADVALLVGARPRGP--G---MERKDLLEANG----AIFTAQGKALNEVAARDVKVLVVGN  131 (326)
T ss_pred             ------HhCCCCEEEEeCCCCCCC--C---CcHHHHHHHHH----HHHHHHHHHHHHhCCCCeEEEEeCC
Confidence                  234789999999985432  2   23444566664    455666666666 323566777663

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=95.54  E-value=0.043  Score=46.81  Aligned_cols=44  Identities=27%  Similarity=0.315  Sum_probs=36.4

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhh
Q 022103           32 IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSE   76 (302)
Q Consensus        32 ~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~   76 (302)
                      +|.|.|+ |-+|+.+|..|+..|++|++++++.+.++...+.+..
T Consensus         1 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~i~~   44 (180)
T PF02737_consen    1 KVAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERARKRIER   44 (180)
T ss_dssp             EEEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHHHHH
T ss_pred             CEEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhhhhHHHH
Confidence            4788888 8899999999999999999999999888777666643

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=95.45  E-value=0.2  Score=41.79  Aligned_cols=86  Identities=20%  Similarity=0.247  Sum_probs=56.6

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhC-------CCceeEEEeeCCCHHHHHHHHHH--H
Q 022103           31 TIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEK-------GLPVNFFQLDVSDPSSIEAFVSW--F  101 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~-------~~~~~~~~~Dlt~~~~~~~~~~~--~  101 (302)
                      +++-+.|- |-+|..+|+.|+++|++|.+.+|++++.++..++--..       -..+.++..=+.+.+.+++++..  +
T Consensus         2 ~~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~~s~~e~~~~~dvvi~~v~~~~~v~~v~~~~~i   80 (163)
T PF03446_consen    2 MKIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVADSPAEAAEQADVVILCVPDDDAVEAVLFGENI   80 (163)
T ss_dssp             BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEESSHHHHHHHBSEEEE-SSSHHHHHHHHHCTTH
T ss_pred             CEEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhhhhhhhHhhcccceEeecccchhhhhhhhhhHH
Confidence            45777887 67999999999999999999999998877766532100       01235566667888888888887  6


Q ss_pred             HhhCCCccEEEEcCCC
Q 022103          102 KSNFAALDILVNNAGV  117 (302)
Q Consensus       102 ~~~~g~id~lv~~aG~  117 (302)
                      .....+=.++|.+.-.
T Consensus        81 ~~~l~~g~iiid~sT~   96 (163)
T PF03446_consen   81 LAGLRPGKIIIDMSTI   96 (163)
T ss_dssp             GGGS-TTEEEEE-SS-
T ss_pred             hhccccceEEEecCCc
Confidence            5554444455544443

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]

Probab=95.37  E-value=0.88  Score=41.09  Aligned_cols=187  Identities=18%  Similarity=0.222  Sum_probs=111.4

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      -+|-+|||--|.||+|..+++.|-..|..++.+..+.++.+.+.+    .|.   -+..|-+.++-++++.+-...  ..
T Consensus       145 kpGhtVlvhaAAGGVGlll~Ql~ra~~a~tI~~asTaeK~~~ake----nG~---~h~I~y~~eD~v~~V~kiTng--KG  215 (336)
T KOG1197|consen  145 KPGHTVLVHAAAGGVGLLLCQLLRAVGAHTIATASTAEKHEIAKE----NGA---EHPIDYSTEDYVDEVKKITNG--KG  215 (336)
T ss_pred             CCCCEEEEEeccccHHHHHHHHHHhcCcEEEEEeccHHHHHHHHh----cCC---cceeeccchhHHHHHHhccCC--CC
Confidence            458899999999999999999999999999999888877554333    232   244566666655555443322  36


Q ss_pred             ccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhh
Q 022103          108 LDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEE  187 (302)
Q Consensus       108 id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~  187 (302)
                      +|+++-..|..       |   +...++               .++   ..|.+|..+-..+..+..+...    ..+..
T Consensus       216 Vd~vyDsvG~d-------t---~~~sl~---------------~Lk---~~G~mVSfG~asgl~~p~~l~~----ls~k~  263 (336)
T KOG1197|consen  216 VDAVYDSVGKD-------T---FAKSLA---------------ALK---PMGKMVSFGNASGLIDPIPLNQ----LSPKA  263 (336)
T ss_pred             ceeeeccccch-------h---hHHHHH---------------Hhc---cCceEEEeccccCCCCCeehhh----cChhh
Confidence            89888877763       1   111111               132   3588888887777665544311    11111


Q ss_pred             hcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHc--cCCCcEEEEeecCcccCCCCCCCCCC
Q 022103          188 LSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRY--EGEGISVNSYCPGFTQTSMTQGQGSH  265 (302)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~--~~~gI~V~~v~PG~v~T~~~~~~~~~  265 (302)
                      +++-                       -+....|-..-.-+..++.-+-.++  +.-+|+|+.+.|              
T Consensus       264 l~lv-----------------------rpsl~gYi~g~~el~~~v~rl~alvnsg~lk~~I~~~yp--------------  306 (336)
T KOG1197|consen  264 LQLV-----------------------RPSLLGYIDGEVELVSYVARLFALVNSGHLKIHIDHVYP--------------  306 (336)
T ss_pred             hhhc-----------------------cHhhhcccCCHHHHHHHHHHHHHHhhcCccceeeeeecc--------------
Confidence            1111                       1123456666666665544433333  234567776654              


Q ss_pred             CHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          266 TADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       266 ~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                       .++++++...+=+.    .-.|++++..+++
T Consensus       307 -ls~vadA~~diesr----ktvGkvlLlp~~~  333 (336)
T KOG1197|consen  307 -LSKVADAHADIESR----KTVGKVLLLPGPE  333 (336)
T ss_pred             -hHHHHHHHHHHHhh----hccceEEEeCCcc
Confidence             45666655555331    2468888877764

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=95.36  E-value=0.11  Score=48.14  Aligned_cols=79  Identities=24%  Similarity=0.306  Sum_probs=52.3

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCE-EEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLT-VILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~-V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      .+|.+++|+|+ |++|..++..+...|++ |++++++.++.+.+ +++   |..   ...|..+.+ .+++.+.. . ..
T Consensus       162 ~~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~-~~~---ga~---~~i~~~~~~-~~~~~~~~-~-~~  230 (339)
T cd08239         162 SGRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLELA-KAL---GAD---FVINSGQDD-VQEIRELT-S-GA  230 (339)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHh---CCC---EEEcCCcch-HHHHHHHh-C-CC
Confidence            34889999986 89999999988888998 99999988776543 444   322   122333333 33322211 1 12


Q ss_pred             CccEEEEcCCC
Q 022103          107 ALDILVNNAGV  117 (302)
Q Consensus       107 ~id~lv~~aG~  117 (302)
                      .+|+++.++|.
T Consensus       231 ~~d~vid~~g~  241 (339)
T cd08239         231 GADVAIECSGN  241 (339)
T ss_pred             CCCEEEECCCC
Confidence            69999998885

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=95.35  E-value=0.18  Score=40.96  Aligned_cols=31  Identities=26%  Similarity=0.444  Sum_probs=26.7

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCC-EEEEEecC
Q 022103           32 IAIVTGANKGIGFALVKRLAELGL-TVILTARD   63 (302)
Q Consensus        32 ~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~   63 (302)
                      +++|.|+ ||+|.++++.|++.|. ++.+++.+
T Consensus         1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d   32 (143)
T cd01483           1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFD   32 (143)
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCC
Confidence            3788887 8999999999999998 68888765

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=95.34  E-value=0.12  Score=45.04  Aligned_cols=59  Identities=15%  Similarity=0.255  Sum_probs=42.6

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCC
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVS   89 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt   89 (302)
                      ++++||.++|.|| |.+|..-++.|++.|++|++++....+  + ..++.+.+ ++.++..+..
T Consensus         5 l~l~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~~~--~-l~~l~~~~-~i~~~~~~~~   63 (205)
T TIGR01470         5 ANLEGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEELES--E-LTLLAEQG-GITWLARCFD   63 (205)
T ss_pred             EEcCCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCCCH--H-HHHHHHcC-CEEEEeCCCC
Confidence            5689999999998 669999999999999999999876542  1 12222222 5666555544

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=95.33  E-value=0.16  Score=40.56  Aligned_cols=76  Identities=14%  Similarity=0.309  Sum_probs=54.6

Q ss_pred             EEEEeCCCchHHHHHHHHHHH-cCCEEEE-EecCh----------------------hhHHHHHHHHhhCCCceeEEEee
Q 022103           32 IAIVTGANKGIGFALVKRLAE-LGLTVIL-TARDV----------------------ERGQRAVESLSEKGLPVNFFQLD   87 (302)
Q Consensus        32 ~vlItGas~gIG~ala~~l~~-~G~~V~l-~~r~~----------------------~~~~~~~~~l~~~~~~~~~~~~D   87 (302)
                      +++|.|++|-+|+.+++.+.+ .|++++. ++|+.                      +.+++..+.     .+   +..|
T Consensus         2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~~l~~~~~~-----~D---VvID   73 (124)
T PF01113_consen    2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVTDDLEELLEE-----AD---VVID   73 (124)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEBS-HHHHTTH------S---EEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccchhHHHhccc-----CC---EEEE
Confidence            589999999999999999999 5888554 45555                      122222222     11   5679


Q ss_pred             CCCHHHHHHHHHHHHhhCCCccEEEEcCCC
Q 022103           88 VSDPSSIEAFVSWFKSNFAALDILVNNAGV  117 (302)
Q Consensus        88 lt~~~~~~~~~~~~~~~~g~id~lv~~aG~  117 (302)
                      +|.++.+...++.+.+.  .+.+|+-+.|.
T Consensus        74 fT~p~~~~~~~~~~~~~--g~~~ViGTTG~  101 (124)
T PF01113_consen   74 FTNPDAVYDNLEYALKH--GVPLVIGTTGF  101 (124)
T ss_dssp             ES-HHHHHHHHHHHHHH--T-EEEEE-SSS
T ss_pred             cCChHHhHHHHHHHHhC--CCCEEEECCCC
Confidence            99999999999988887  67889988888

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=95.32  E-value=0.12  Score=47.07  Aligned_cols=80  Identities=20%  Similarity=0.278  Sum_probs=53.6

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCc
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAAL  108 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~i  108 (302)
                      ++.+++|+|+++++|.+++..+...|++|+.+.++.++.+.. +++   +..   ...|..+.+..+.+.+..  ....+
T Consensus       142 ~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~-~~~---g~~---~~~~~~~~~~~~~~~~~~--~~~~~  212 (324)
T cd08244         142 PGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALV-RAL---GAD---VAVDYTRPDWPDQVREAL--GGGGV  212 (324)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHc---CCC---EEEecCCccHHHHHHHHc--CCCCc
Confidence            578999999999999999999999999999999888775544 332   321   122333333233222211  11259


Q ss_pred             cEEEEcCCC
Q 022103          109 DILVNNAGV  117 (302)
Q Consensus       109 d~lv~~aG~  117 (302)
                      |+++.+.|.
T Consensus       213 d~vl~~~g~  221 (324)
T cd08244         213 TVVLDGVGG  221 (324)
T ss_pred             eEEEECCCh
Confidence            999998874

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent

Probab=95.30  E-value=0.27  Score=47.12  Aligned_cols=117  Identities=13%  Similarity=0.038  Sum_probs=70.9

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcCC-E------EEEE--ecChhhHHHHHHHHhhCC-CceeEEEeeCCCHHHHHHHH
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELGL-T------VILT--ARDVERGQRAVESLSEKG-LPVNFFQLDVSDPSSIEAFV   98 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G~-~------V~l~--~r~~~~~~~~~~~l~~~~-~~~~~~~~Dlt~~~~~~~~~   98 (302)
                      +.-.|.|+|++|.+|.++|..|+..|. .      ++|+  +++.++++..+..+.+.- .-..-+..--.+.+++    
T Consensus        43 ~p~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~i~~~~y~~~----  118 (387)
T TIGR01757        43 KTVNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVSIGIDPYEVF----  118 (387)
T ss_pred             CCeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceEEecCCHHHh----
Confidence            345899999999999999999998874 2      3344  888888777766665432 1000011001222322    


Q ss_pred             HHHHhhCCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhc-CCCCCcEEEec
Q 022103           99 SWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRR-SPSKSRILNIS  165 (302)
Q Consensus        99 ~~~~~~~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~-~~~~~~iv~vs  165 (302)
                             ...|++|.+||....+  ..+   -.+.+..|..    +.+.+.+.+.+ .+..+.||.+|
T Consensus       119 -------kdaDIVVitAG~prkp--g~t---R~dll~~N~~----I~k~i~~~I~~~a~~~~iviVVs  170 (387)
T TIGR01757       119 -------EDADWALLIGAKPRGP--GME---RADLLDINGQ----IFADQGKALNAVASKNCKVLVVG  170 (387)
T ss_pred             -------CCCCEEEECCCCCCCC--CCC---HHHHHHHHHH----HHHHHHHHHHHhCCCCeEEEEcC
Confidence                   4789999999986432  223   4445666644    45555555555 32456677666

This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=95.29  E-value=0.014  Score=45.14  Aligned_cols=39  Identities=18%  Similarity=0.168  Sum_probs=33.4

Q ss_pred             cccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecCh
Q 022103           25 KWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDV   64 (302)
Q Consensus        25 ~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~   64 (302)
                      .++++|+.++|.|+ |.+|..-++.|.+.|++|++++...
T Consensus         2 ~l~l~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~   40 (103)
T PF13241_consen    2 FLDLKGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEI   40 (103)
T ss_dssp             EE--TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSE
T ss_pred             EEEcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCch
Confidence            36789999999999 7899999999999999999999996

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=95.27  E-value=0.14  Score=44.41  Aligned_cols=36  Identities=19%  Similarity=0.383  Sum_probs=30.0

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGL-TVILTARD   63 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~   63 (302)
                      .+++++|+|.|+ ||+|.++++.|+..|. ++.+++.+
T Consensus        18 ~L~~s~VlIiG~-gglG~evak~La~~GVg~i~lvD~d   54 (197)
T cd01492          18 RLRSARILLIGL-KGLGAEIAKNLVLSGIGSLTILDDR   54 (197)
T ss_pred             HHHhCcEEEEcC-CHHHHHHHHHHHHcCCCEEEEEECC
Confidence            366788999986 5699999999999997 58888764

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=95.20  E-value=0.18  Score=46.80  Aligned_cols=113  Identities=21%  Similarity=0.219  Sum_probs=70.0

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCC--EEEEEecChhhHHHHHHHHhhCCC---ceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           32 IAIVTGANKGIGFALVKRLAELGL--TVILTARDVERGQRAVESLSEKGL---PVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        32 ~vlItGas~gIG~ala~~l~~~G~--~V~l~~r~~~~~~~~~~~l~~~~~---~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      .|.|+|+ |+||.++|..|+.++.  ++++++...++.+-.+..+.+...   .-..+..| .+.+++           .
T Consensus         2 KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~~-~~y~~~-----------~   68 (313)
T COG0039           2 KVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITGD-GDYEDL-----------K   68 (313)
T ss_pred             eEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceEEecC-CChhhh-----------c
Confidence            5889999 9999999999988863  799999997666655555554321   01222222 223322           3


Q ss_pred             CccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecC
Q 022103          107 ALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISS  166 (302)
Q Consensus       107 ~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS  166 (302)
                      ..|++|..||....+  .++   -.+.++.|..=.--+.+.+    .+....+.|+.+|-
T Consensus        69 ~aDiVvitAG~prKp--Gmt---R~DLl~~Na~I~~~i~~~i----~~~~~d~ivlVvtN  119 (313)
T COG0039          69 GADIVVITAGVPRKP--GMT---RLDLLEKNAKIVKDIAKAI----AKYAPDAIVLVVTN  119 (313)
T ss_pred             CCCEEEEeCCCCCCC--CCC---HHHHHHhhHHHHHHHHHHH----HhhCCCeEEEEecC
Confidence            789999999987542  233   3445677755444444444    44323466666553

>PLN02494 adenosylhomocysteinase

Probab=95.18  E-value=0.073  Score=52.03  Aligned_cols=48  Identities=21%  Similarity=0.267  Sum_probs=40.7

Q ss_pred             cccccccccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhH
Q 022103           19 SLVSSTKWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERG   67 (302)
Q Consensus        19 ~~~~~~~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~   67 (302)
                      .....+...+.||+++|.|.+ .||+.+|+.+...|++|+++++++.+.
T Consensus       243 ~i~r~t~i~LaGKtVvViGyG-~IGr~vA~~aka~Ga~VIV~e~dp~r~  290 (477)
T PLN02494        243 GLMRATDVMIAGKVAVICGYG-DVGKGCAAAMKAAGARVIVTEIDPICA  290 (477)
T ss_pred             HHHHhcCCccCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCchhh
Confidence            445555667899999999995 799999999999999999999987653

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=95.15  E-value=0.063  Score=47.13  Aligned_cols=42  Identities=31%  Similarity=0.448  Sum_probs=36.9

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHH
Q 022103           32 IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVES   73 (302)
Q Consensus        32 ~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~   73 (302)
                      ++.|.||+|.+|.++++.|++.|++|++.+|++++.+...+.
T Consensus         2 kI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~   43 (219)
T TIGR01915         2 KIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAK   43 (219)
T ss_pred             EEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHH
Confidence            488999999999999999999999999999998887666553

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>PRK07411 hypothetical protein; Validated

Probab=95.15  E-value=0.16  Score=48.69  Aligned_cols=36  Identities=25%  Similarity=0.363  Sum_probs=30.7

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGL-TVILTARD   63 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~   63 (302)
                      .++..+|+|.|+ ||+|..+++.|+..|. ++++++.+
T Consensus        35 ~L~~~~VlivG~-GGlG~~va~~La~~Gvg~l~lvD~D   71 (390)
T PRK07411         35 RLKAASVLCIGT-GGLGSPLLLYLAAAGIGRIGIVDFD   71 (390)
T ss_pred             HHhcCcEEEECC-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            467889999998 6799999999999997 58887663

>PRK06223 malate dehydrogenase; Reviewed

Probab=95.12  E-value=0.4  Score=44.20  Aligned_cols=76  Identities=25%  Similarity=0.167  Sum_probs=49.3

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHhhCCC---ceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           31 TIAIVTGANKGIGFALVKRLAELGL-TVILTARDVERGQRAVESLSEKGL---PVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~---~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      +.+.|.|+ |.+|..+|..++..|. +|++++++.++++.....+.+...   ....+.. .+|.+++           .
T Consensus         3 ~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~i~~-~~d~~~~-----------~   69 (307)
T PRK06223          3 KKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAEAAPVEGFDTKITG-TNDYEDI-----------A   69 (307)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHhhhhhcCCCcEEEe-CCCHHHH-----------C
Confidence            46899999 8899999999999875 999999988766544433332210   0011111 1222211           3


Q ss_pred             CccEEEEcCCCCC
Q 022103          107 ALDILVNNAGVSF  119 (302)
Q Consensus       107 ~id~lv~~aG~~~  119 (302)
                      ..|++|.++|.+.
T Consensus        70 ~aDiVii~~~~p~   82 (307)
T PRK06223         70 GSDVVVITAGVPR   82 (307)
T ss_pred             CCCEEEECCCCCC
Confidence            6899999999764

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=95.07  E-value=0.12  Score=47.87  Aligned_cols=87  Identities=18%  Similarity=0.186  Sum_probs=52.2

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      -++++++|.|+++++|.++++.+...|++|+.+.++.+..++..+.+.+.+....+..-+.+ ..++.+.+.....  +.
T Consensus       145 ~~g~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~i~~~~~--~~  221 (341)
T cd08290         145 QPGDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDRPDLEELKERLKALGADHVLTEEELR-SLLATELLKSAPG--GR  221 (341)
T ss_pred             CCCCEEEEccchhHHHHHHHHHHHHcCCeEEEEEcCCCcchhHHHHHHhcCCCEEEeCcccc-cccHHHHHHHHcC--CC
Confidence            36889999999999999999999999999988888763222222333223322222111110 0123233332221  25


Q ss_pred             ccEEEEcCCC
Q 022103          108 LDILVNNAGV  117 (302)
Q Consensus       108 id~lv~~aG~  117 (302)
                      +|.++.+.|.
T Consensus       222 ~d~vld~~g~  231 (341)
T cd08290         222 PKLALNCVGG  231 (341)
T ss_pred             ceEEEECcCc
Confidence            8999998885

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=95.04  E-value=0.2  Score=47.35  Aligned_cols=79  Identities=16%  Similarity=0.217  Sum_probs=52.5

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCC-HHHHHHHHHHHHhhCC
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELGL-TVILTARDVERGQRAVESLSEKGLPVNFFQLDVSD-PSSIEAFVSWFKSNFA  106 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~-~~~~~~~~~~~~~~~g  106 (302)
                      +|.+++|+|+ |+||...+..+...|+ +|+.++++.++++.+ +++   |...   ..|..+ .+++.+.+.++..  +
T Consensus       185 ~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a-~~~---Ga~~---~i~~~~~~~~~~~~v~~~~~--~  254 (368)
T TIGR02818       185 EGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAKFELA-KKL---GATD---CVNPNDYDKPIQEVIVEITD--G  254 (368)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHh---CCCe---EEcccccchhHHHHHHHHhC--C
Confidence            4789999985 8999999888888898 799999988776655 333   3221   123332 2223333333322  3


Q ss_pred             CccEEEEcCCC
Q 022103          107 ALDILVNNAGV  117 (302)
Q Consensus       107 ~id~lv~~aG~  117 (302)
                      .+|+++.++|.
T Consensus       255 g~d~vid~~G~  265 (368)
T TIGR02818       255 GVDYSFECIGN  265 (368)
T ss_pred             CCCEEEECCCC
Confidence            68999999885

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=95.03  E-value=0.19  Score=48.20  Aligned_cols=35  Identities=31%  Similarity=0.397  Sum_probs=30.0

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGL-TVILTARD   63 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~   63 (302)
                      +++.+|+|.|+ ||+|..+++.|+..|. ++.+++.+
T Consensus        40 L~~~~VlviG~-GGlGs~va~~La~~Gvg~i~lvD~D   75 (392)
T PRK07878         40 LKNARVLVIGA-GGLGSPTLLYLAAAGVGTLGIVEFD   75 (392)
T ss_pred             HhcCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCC
Confidence            57889999998 6899999999999997 58887653

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=94.97  E-value=0.26  Score=42.69  Aligned_cols=36  Identities=17%  Similarity=0.366  Sum_probs=30.2

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCE-EEEEecC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLT-VILTARD   63 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~-V~l~~r~   63 (302)
                      .+++.+|+|.|++ |+|.++++.|+..|.. +++++.+
T Consensus        16 ~L~~s~VlviG~g-glGsevak~L~~~GVg~i~lvD~d   52 (198)
T cd01485          16 KLRSAKVLIIGAG-ALGAEIAKNLVLAGIDSITIVDHR   52 (198)
T ss_pred             HHhhCcEEEECCC-HHHHHHHHHHHHcCCCEEEEEECC
Confidence            3667889999885 5999999999999974 8888765

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=94.96  E-value=0.2  Score=48.60  Aligned_cols=43  Identities=26%  Similarity=0.299  Sum_probs=38.0

Q ss_pred             cccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHH
Q 022103           25 KWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQ   68 (302)
Q Consensus        25 ~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~   68 (302)
                      ...+.|++++|.|. |.||+.+|+.|...|++|+++++++.+..
T Consensus       207 ~~~l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~  249 (425)
T PRK05476        207 NVLIAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICAL  249 (425)
T ss_pred             cCCCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhhH
Confidence            45679999999998 68999999999999999999999886643

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.91  E-value=0.096  Score=48.38  Aligned_cols=85  Identities=16%  Similarity=0.158  Sum_probs=57.2

Q ss_pred             ccccccccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHH
Q 022103           20 LVSSTKWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVS   99 (302)
Q Consensus        20 ~~~~~~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~   99 (302)
                      +..++..++.||.++|.|.++-+|+.+|..|.++|+.|.++.|.....++..+       +..++..-+.+...+.... 
T Consensus       149 lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~l~e~~~-------~ADIVIsavg~~~~v~~~~-  220 (301)
T PRK14194        149 LLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDAKALCR-------QADIVVAAVGRPRLIDADW-  220 (301)
T ss_pred             HHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCCHHHHHh-------cCCEEEEecCChhcccHhh-
Confidence            34455678999999999999999999999999999999999776554443333       2233333445554443322 


Q ss_pred             HHHhhCCCccEEEEcCCCC
Q 022103          100 WFKSNFAALDILVNNAGVS  118 (302)
Q Consensus       100 ~~~~~~g~id~lv~~aG~~  118 (302)
                       +     +...+|...|+.
T Consensus       221 -i-----k~GaiVIDvgin  233 (301)
T PRK14194        221 -L-----KPGAVVIDVGIN  233 (301)
T ss_pred             -c-----cCCcEEEEeccc
Confidence             1     334566666654

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=94.89  E-value=0.21  Score=47.18  Aligned_cols=80  Identities=15%  Similarity=0.222  Sum_probs=54.4

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCH-HHHHHHHHHHHhhC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGL-TVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP-SSIEAFVSWFKSNF  105 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~-~~~~~~~~~~~~~~  105 (302)
                      -+|.+++|.|+ |+||...+..+...|+ +|++++++.++++.+ +++   |... +  .|..+. +++.+.+.++..  
T Consensus       185 ~~g~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~-~~l---Ga~~-~--i~~~~~~~~~~~~v~~~~~--  254 (368)
T cd08300         185 EPGSTVAVFGL-GAVGLAVIQGAKAAGASRIIGIDINPDKFELA-KKF---GATD-C--VNPKDHDKPIQQVLVEMTD--  254 (368)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHc---CCCE-E--EcccccchHHHHHHHHHhC--
Confidence            35889999985 8999999998888999 699999998876644 333   3221 1  233332 234444444432  


Q ss_pred             CCccEEEEcCCC
Q 022103          106 AALDILVNNAGV  117 (302)
Q Consensus       106 g~id~lv~~aG~  117 (302)
                      +.+|+++.++|.
T Consensus       255 ~g~d~vid~~g~  266 (368)
T cd08300         255 GGVDYTFECIGN  266 (368)
T ss_pred             CCCcEEEECCCC
Confidence            369999998885

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=94.87  E-value=0.077  Score=43.51  Aligned_cols=43  Identities=19%  Similarity=0.086  Sum_probs=38.3

Q ss_pred             ccccccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecCh
Q 022103           22 SSTKWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDV   64 (302)
Q Consensus        22 ~~~~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~   64 (302)
                      ..+..+++||.++|.|.+.-+|+.++..|.++|+.|..+.++.
T Consensus        20 ~~~~~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t   62 (140)
T cd05212          20 NKEGVRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKT   62 (140)
T ss_pred             HHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCC
Confidence            3456789999999999999999999999999999999987654

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=94.87  E-value=0.25  Score=42.98  Aligned_cols=38  Identities=8%  Similarity=0.137  Sum_probs=34.7

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecCh
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDV   64 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~   64 (302)
                      ++++||.++|.|| |.+|...++.|.+.|++|+++++..
T Consensus         6 l~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~   43 (202)
T PRK06718          6 IDLSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPEL   43 (202)
T ss_pred             EEcCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCC
Confidence            5789999999999 7799999999999999999998765

>PLN02928 oxidoreductase family protein

Probab=94.86  E-value=0.1  Score=49.31  Aligned_cols=38  Identities=26%  Similarity=0.319  Sum_probs=34.8

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecCh
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDV   64 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~   64 (302)
                      ..+.||++.|.|. |.||+++|+.|...|++|+..+|+.
T Consensus       155 ~~l~gktvGIiG~-G~IG~~vA~~l~afG~~V~~~dr~~  192 (347)
T PLN02928        155 DTLFGKTVFILGY-GAIGIELAKRLRPFGVKLLATRRSW  192 (347)
T ss_pred             cCCCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCCC
Confidence            4689999999998 7799999999999999999999874

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=94.86  E-value=0.21  Score=47.93  Aligned_cols=88  Identities=11%  Similarity=0.098  Sum_probs=52.9

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcCC---EEEEEecChhhHHHHHHHHhhCC--CceeEEEeeCCCHHHHHHHHHHHHh
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELGL---TVILTARDVERGQRAVESLSEKG--LPVNFFQLDVSDPSSIEAFVSWFKS  103 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G~---~V~l~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dlt~~~~~~~~~~~~~~  103 (302)
                      +|.+++|.|++|++|...+..+...|+   +|++++++.++++.+.+......  ..+.....|..+.+++.+.+.++-.
T Consensus       175 ~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~v~~~t~  254 (410)
T cd08238         175 PGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQRLFPPEAASRGIELLYVNPATIDDLHATLMELTG  254 (410)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHHhccccccccCceEEEECCCccccHHHHHHHHhC
Confidence            467999999999999998877666554   79999999988776544321110  0111122233322233333333221


Q ss_pred             hCCCccEEEEcCCC
Q 022103          104 NFAALDILVNNAGV  117 (302)
Q Consensus       104 ~~g~id~lv~~aG~  117 (302)
                       ...+|.++.++|.
T Consensus       255 -g~g~D~vid~~g~  267 (410)
T cd08238         255 -GQGFDDVFVFVPV  267 (410)
T ss_pred             -CCCCCEEEEcCCC
Confidence             1258999988774

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>PRK08655 prephenate dehydrogenase; Provisional

Probab=94.86  E-value=0.28  Score=47.86  Aligned_cols=41  Identities=29%  Similarity=0.507  Sum_probs=35.3

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHH
Q 022103           32 IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVE   72 (302)
Q Consensus        32 ~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~   72 (302)
                      ++.|.||.|.+|.++++.|.+.|++|.+++|+.+...+...
T Consensus         2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~   42 (437)
T PRK08655          2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAK   42 (437)
T ss_pred             EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHH
Confidence            58999999999999999999999999999999876544433

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=94.82  E-value=0.15  Score=49.92  Aligned_cols=42  Identities=19%  Similarity=0.220  Sum_probs=37.3

Q ss_pred             cccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhH
Q 022103           25 KWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERG   67 (302)
Q Consensus        25 ~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~   67 (302)
                      ...+.||+++|.|.+ .||+.+|+.|...|++|+++.+++.+.
T Consensus       249 ~~~LaGKtVgVIG~G-~IGr~vA~rL~a~Ga~ViV~e~dp~~a  290 (476)
T PTZ00075        249 DVMIAGKTVVVCGYG-DVGKGCAQALRGFGARVVVTEIDPICA  290 (476)
T ss_pred             CCCcCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCchhH
Confidence            467899999999986 599999999999999999998887654

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=94.82  E-value=0.053  Score=52.38  Aligned_cols=52  Identities=23%  Similarity=0.251  Sum_probs=43.2

Q ss_pred             CcccccccccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH
Q 022103           18 SSLVSSTKWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRA   70 (302)
Q Consensus        18 ~~~~~~~~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~   70 (302)
                      ......++..+.|++|+|.|+ |.||+.+++.+...|++|+++++++.+++.+
T Consensus       190 ~~i~r~t~~~l~GktVvViG~-G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A  241 (413)
T cd00401         190 DGIKRATDVMIAGKVAVVAGY-GDVGKGCAQSLRGQGARVIVTEVDPICALQA  241 (413)
T ss_pred             HHHHHhcCCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECChhhHHHH
Confidence            344555667789999999999 5799999999999999999999998776543

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>PRK02006 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=94.82  E-value=0.42  Score=47.24  Aligned_cols=125  Identities=15%  Similarity=0.188  Sum_probs=70.9

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      ++++.++|.|. |+.|.++|+.|.++|++|.+.+.....  ...+.+.+.+..+.++..+.. ++.+           ..
T Consensus         5 ~~~~~i~v~G~-G~sG~s~a~~L~~~G~~v~~~D~~~~~--~~~~~L~~~~~~~~~~~g~~~-~~~~-----------~~   69 (498)
T PRK02006          5 LQGPMVLVLGL-GESGLAMARWCARHGARLRVADTREAP--PNLAALRAELPDAEFVGGPFD-PALL-----------DG   69 (498)
T ss_pred             cCCCEEEEEee-cHhHHHHHHHHHHCCCEEEEEcCCCCc--hhHHHHHhhcCCcEEEeCCCc-hhHh-----------cC
Confidence            56788999996 579999999999999999998875422  112234333323333332222 1111           14


Q ss_pred             ccEEEEcCCCCCCCCCCCCHHHHH--HHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCc
Q 022103          108 LDILVNNAGVSFNDIYKNTVEHAE--TVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLG  169 (302)
Q Consensus       108 id~lv~~aG~~~~~~~~~~~e~~~--~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~  169 (302)
                      .|.||...|+....  +...+.+.  +...+.+.+..-++..++..+........+|.|+...|
T Consensus        70 ~d~vv~sp~I~~~~--~~~~~~~~~a~~~~i~v~~~~e~~~~~~~~l~~~~~~~~~I~VTGTnG  131 (498)
T PRK02006         70 VDLVALSPGLSPLE--AALAPLVAAARERGIPVWGEIELFAQALAALGASGYAPKVLAITGTNG  131 (498)
T ss_pred             CCEEEECCCCCCcc--cccCHHHHHHHHCCCcEEEHHHHHHHHHhhhccccCCCCEEEEECCCc
Confidence            79999999986421  01112222  22356667666666555554422211235777765444

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=94.80  E-value=0.16  Score=46.47  Aligned_cols=42  Identities=29%  Similarity=0.431  Sum_probs=36.8

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRA   70 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~   70 (302)
                      .+.+++|.|++|++|.++++.....|++|+.+.++.++.+..
T Consensus       146 ~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~  187 (326)
T cd08289         146 EQGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYL  187 (326)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHH
Confidence            367999999999999999999988999999999998776555

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>PRK14967 putative methyltransferase; Provisional

Probab=94.79  E-value=0.79  Score=40.21  Aligned_cols=75  Identities=19%  Similarity=0.156  Sum_probs=50.5

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELGL-TVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      ++.+++-.|++.|.   ++..+++.|. +|++++.++..++.+.+.+...+.++.++..|+.+.      +   .  .+.
T Consensus        36 ~~~~vLDlGcG~G~---~~~~la~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~~d~~~~------~---~--~~~  101 (223)
T PRK14967         36 PGRRVLDLCTGSGA---LAVAAAAAGAGSVTAVDISRRAVRSARLNALLAGVDVDVRRGDWARA------V---E--FRP  101 (223)
T ss_pred             CCCeEEEecCCHHH---HHHHHHHcCCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEECchhhh------c---c--CCC
Confidence            46789999987644   3444455566 899999999877766666655444566776666431      1   1  147


Q ss_pred             ccEEEEcCCC
Q 022103          108 LDILVNNAGV  117 (302)
Q Consensus       108 id~lv~~aG~  117 (302)
                      +|.|+.|...
T Consensus       102 fD~Vi~npPy  111 (223)
T PRK14967        102 FDVVVSNPPY  111 (223)
T ss_pred             eeEEEECCCC
Confidence            9999999754

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=94.79  E-value=0.13  Score=47.09  Aligned_cols=81  Identities=17%  Similarity=0.172  Sum_probs=53.2

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      .+|.+++|.|+++++|.+++......|++|+.+.++.++.+...+ +   +.+ .++  +..+.. +.+.+.+.... ..
T Consensus       138 ~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~-~---g~~-~~~--~~~~~~-~~~~i~~~~~~-~~  208 (324)
T cd08292         138 KPGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAELRA-L---GIG-PVV--STEQPG-WQDKVREAAGG-AP  208 (324)
T ss_pred             CCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHHh-c---CCC-EEE--cCCCch-HHHHHHHHhCC-CC
Confidence            357899999999999999999888899999999888876554433 2   322 122  222222 22222222111 25


Q ss_pred             ccEEEEcCCC
Q 022103          108 LDILVNNAGV  117 (302)
Q Consensus       108 id~lv~~aG~  117 (302)
                      +|+++.++|.
T Consensus       209 ~d~v~d~~g~  218 (324)
T cd08292         209 ISVALDSVGG  218 (324)
T ss_pred             CcEEEECCCC
Confidence            9999998885

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family

Probab=94.78  E-value=0.53  Score=41.29  Aligned_cols=77  Identities=14%  Similarity=0.095  Sum_probs=53.5

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhh-------------CCCceeEEEeeCCCHHHHH
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSE-------------KGLPVNFFQLDVSDPSSIE   95 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~-------------~~~~~~~~~~Dlt~~~~~~   95 (302)
                      ++.+||+-|++.|   .-+..|+++|++|+.++.++..++.+.++-+.             .+.++.++.+|+.+...  
T Consensus        34 ~~~rvLd~GCG~G---~da~~LA~~G~~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~--  108 (213)
T TIGR03840        34 AGARVFVPLCGKS---LDLAWLAEQGHRVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFALTA--  108 (213)
T ss_pred             CCCeEEEeCCCch---hHHHHHHhCCCeEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCCCc--
Confidence            6679999999766   45677889999999999999887765442211             13467888899987542  


Q ss_pred             HHHHHHHhhCCCccEEEEcCCC
Q 022103           96 AFVSWFKSNFAALDILVNNAGV  117 (302)
Q Consensus        96 ~~~~~~~~~~g~id~lv~~aG~  117 (302)
                             ...+.+|.++-.+..
T Consensus       109 -------~~~~~fD~i~D~~~~  123 (213)
T TIGR03840       109 -------ADLGPVDAVYDRAAL  123 (213)
T ss_pred             -------ccCCCcCEEEechhh
Confidence                   011457777666544

Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=94.77  E-value=0.14  Score=46.27  Aligned_cols=81  Identities=26%  Similarity=0.332  Sum_probs=52.5

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      .++.+++|+|+++++|.+++..+...|++|+.+.++.++.+.. +.+   +.. ..+.  ..+.+..+.+. .... ...
T Consensus       138 ~~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~---g~~-~~~~--~~~~~~~~~i~-~~~~-~~~  208 (323)
T cd08241         138 QPGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLALA-RAL---GAD-HVID--YRDPDLRERVK-ALTG-GRG  208 (323)
T ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHHHH-HHc---CCc-eeee--cCCccHHHHHH-HHcC-CCC
Confidence            3578999999999999999999999999999999988765544 222   221 1222  22222222222 2211 135


Q ss_pred             ccEEEEcCCC
Q 022103          108 LDILVNNAGV  117 (302)
Q Consensus       108 id~lv~~aG~  117 (302)
                      +|.++++.|.
T Consensus       209 ~d~v~~~~g~  218 (323)
T cd08241         209 VDVVYDPVGG  218 (323)
T ss_pred             cEEEEECccH
Confidence            8999998874

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>PF12076 Wax2_C: WAX2 C-terminal domain; InterPro: IPR021940 This presumed domain is functionally uncharacterised

Probab=94.74  E-value=0.073  Score=44.19  Aligned_cols=42  Identities=21%  Similarity=0.305  Sum_probs=35.0

Q ss_pred             EEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhh
Q 022103           33 AIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSE   76 (302)
Q Consensus        33 vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~   76 (302)
                      |+.+|+++-+|+++|..|+++|.+|++.  +.++-+....++.+
T Consensus         1 V~L~G~~sKvaraiA~~LC~rgv~V~m~--~~~~y~~lk~~~~~   42 (164)
T PF12076_consen    1 VFLTGNTSKVARAIALALCRRGVQVVML--SKERYESLKSEAPE   42 (164)
T ss_pred             CeecccccHHHHHHHHHHHhcCCEEEEe--cHHHHHHHHHHcCH
Confidence            5789999999999999999999999998  55566666666644

This domain is found in eukaryotes. This domain is about 170 amino acids in length. This domain is found associated with PF04116 from PFAM. This domain has a conserved LEGW sequence motif. This region has similarity to short chain dehydrogenases [].

>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]

Probab=94.73  E-value=0.14  Score=46.87  Aligned_cols=86  Identities=23%  Similarity=0.287  Sum_probs=67.4

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      ..+|.+++--||++++|+++.......|++-+-+.|+....+++.++|...|....+-.-.+.+     .-..+...+++
T Consensus       158 L~~GD~vIQNganS~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel~~-----~~~~k~~~~~~  232 (354)
T KOG0025|consen  158 LNKGDSVIQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATEVITEEELRD-----RKMKKFKGDNP  232 (354)
T ss_pred             cCCCCeeeecCcccHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCceEecHHHhcc-----hhhhhhhccCC
Confidence            3568899999999999999999888889999999999999999999998877654433333332     33333444668


Q ss_pred             CccEEEEcCCC
Q 022103          107 ALDILVNNAGV  117 (302)
Q Consensus       107 ~id~lv~~aG~  117 (302)
                      ++..-+||.|.
T Consensus       233 ~prLalNcVGG  243 (354)
T KOG0025|consen  233 RPRLALNCVGG  243 (354)
T ss_pred             CceEEEeccCc
Confidence            89999999987

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=94.72  E-value=0.28  Score=45.87  Aligned_cols=42  Identities=29%  Similarity=0.396  Sum_probs=36.7

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRA   70 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~   70 (302)
                      .+|.+++|.|+ |+||..++..+...|++|++++++.++++.+
T Consensus       165 ~~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~  206 (349)
T TIGR03201       165 KKGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEMM  206 (349)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHH
Confidence            35889999999 9999999998888899999999998877644

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=94.67  E-value=0.13  Score=40.77  Aligned_cols=74  Identities=19%  Similarity=0.231  Sum_probs=42.1

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcC-CEE-EEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCcc
Q 022103           32 IAIVTGANKGIGFALVKRLAELG-LTV-ILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALD  109 (302)
Q Consensus        32 ~vlItGas~gIG~ala~~l~~~G-~~V-~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id  109 (302)
                      +|.|.|++|.+|..+++.|.++- +++ .+++++.+..+......+..........-| .+.+.+           ..+|
T Consensus         1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~-----------~~~D   68 (121)
T PF01118_consen    1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVED-ADPEEL-----------SDVD   68 (121)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEE-TSGHHH-----------TTES
T ss_pred             CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEee-cchhHh-----------hcCC
Confidence            58899999999999999999984 564 445555423222222222111111111122 444433           3789


Q ss_pred             EEEEcCCC
Q 022103          110 ILVNNAGV  117 (302)
Q Consensus       110 ~lv~~aG~  117 (302)
                      ++|.+.+.
T Consensus        69 vvf~a~~~   76 (121)
T PF01118_consen   69 VVFLALPH   76 (121)
T ss_dssp             EEEE-SCH
T ss_pred             EEEecCch
Confidence            99988654

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=94.66  E-value=0.23  Score=44.61  Aligned_cols=80  Identities=23%  Similarity=0.293  Sum_probs=51.9

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCc
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAAL  108 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~i  108 (302)
                      ++.+++|.|+++++|.++++.+...|++|+.+.++.++.+.. +.+   +.+ .++.  ..+......+.....  ...+
T Consensus       136 ~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~---g~~-~~~~--~~~~~~~~~~~~~~~--~~~~  206 (320)
T cd05286         136 PGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAELA-RAA---GAD-HVIN--YRDEDFVERVREITG--GRGV  206 (320)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHC---CCC-EEEe--CCchhHHHHHHHHcC--CCCe
Confidence            578999999999999999999888999999998887765544 332   322 1222  222222222222111  1258


Q ss_pred             cEEEEcCCC
Q 022103          109 DILVNNAGV  117 (302)
Q Consensus       109 d~lv~~aG~  117 (302)
                      |.++++.|.
T Consensus       207 d~vl~~~~~  215 (320)
T cd05286         207 DVVYDGVGK  215 (320)
T ss_pred             eEEEECCCc
Confidence            999988764

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]

Probab=94.66  E-value=0.27  Score=45.22  Aligned_cols=81  Identities=21%  Similarity=0.259  Sum_probs=56.7

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHH-cCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAE-LGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~-~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      -+|+|++|.||+|.+|. ++=+|++ .|++|+...-+.++.+-+..+..-.      -..+--++.++.+++.+..-  .
T Consensus       152 k~geTv~VSaAsGAvGq-l~GQ~Ak~~Gc~VVGsaGS~EKv~ll~~~~G~d------~afNYK~e~~~~~aL~r~~P--~  222 (343)
T KOG1196|consen  152 KKGETVFVSAASGAVGQ-LVGQFAKLMGCYVVGSAGSKEKVDLLKTKFGFD------DAFNYKEESDLSAALKRCFP--E  222 (343)
T ss_pred             CCCCEEEEeeccchhHH-HHHHHHHhcCCEEEEecCChhhhhhhHhccCCc------cceeccCccCHHHHHHHhCC--C
Confidence            45799999999999996 4555555 4999999999988876655544321      11233345456666665433  3


Q ss_pred             CccEEEEcCCC
Q 022103          107 ALDILVNNAGV  117 (302)
Q Consensus       107 ~id~lv~~aG~  117 (302)
                      .||+.+-|+|.
T Consensus       223 GIDiYfeNVGG  233 (343)
T KOG1196|consen  223 GIDIYFENVGG  233 (343)
T ss_pred             cceEEEeccCc
Confidence            79999999997

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.63  E-value=0.093  Score=48.16  Aligned_cols=45  Identities=16%  Similarity=0.149  Sum_probs=38.8

Q ss_pred             ccccccccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecCh
Q 022103           20 LVSSTKWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDV   64 (302)
Q Consensus        20 ~~~~~~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~   64 (302)
                      ...+...+++||.++|.|.+.-+|+.++..|.++|++|+.+.+..
T Consensus       148 ll~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t  192 (286)
T PRK14175        148 ILKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRS  192 (286)
T ss_pred             HHHHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc
Confidence            344556689999999999999999999999999999999887653

>PLN02740 Alcohol dehydrogenase-like

Probab=94.62  E-value=0.25  Score=46.96  Aligned_cols=80  Identities=15%  Similarity=0.277  Sum_probs=53.3

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCH-HHHHHHHHHHHhhC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGL-TVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP-SSIEAFVSWFKSNF  105 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~-~~~~~~~~~~~~~~  105 (302)
                      .+|.+++|.|+ |+||..++..+...|+ +|++++++.++++.+ +++   |... +  .|..+. +++.+.+.++..  
T Consensus       197 ~~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a-~~~---Ga~~-~--i~~~~~~~~~~~~v~~~~~--  266 (381)
T PLN02740        197 QAGSSVAIFGL-GAVGLAVAEGARARGASKIIGVDINPEKFEKG-KEM---GITD-F--INPKDSDKPVHERIREMTG--  266 (381)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHHHHHH-HHc---CCcE-E--EecccccchHHHHHHHHhC--
Confidence            35889999986 8999999998888898 699999988776655 333   3221 2  233322 123333333322  


Q ss_pred             CCccEEEEcCCC
Q 022103          106 AALDILVNNAGV  117 (302)
Q Consensus       106 g~id~lv~~aG~  117 (302)
                      +.+|+++.++|.
T Consensus       267 ~g~dvvid~~G~  278 (381)
T PLN02740        267 GGVDYSFECAGN  278 (381)
T ss_pred             CCCCEEEECCCC
Confidence            269999999985

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=94.61  E-value=0.25  Score=44.74  Aligned_cols=78  Identities=24%  Similarity=0.312  Sum_probs=52.1

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      .+|.+++|.|+++++|.+++......|++|+.+.++.++.+.. .++   +.+. ++. +  .. ++.+.+.+.   ...
T Consensus       141 ~~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~---g~~~-~~~-~--~~-~~~~~i~~~---~~~  208 (320)
T cd08243         141 QPGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAALL-KEL---GADE-VVI-D--DG-AIAEQLRAA---PGG  208 (320)
T ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-Hhc---CCcE-EEe-c--Cc-cHHHHHHHh---CCC
Confidence            3578999999999999999999999999999999887665444 332   3221 121 1  11 222222222   246


Q ss_pred             ccEEEEcCCC
Q 022103          108 LDILVNNAGV  117 (302)
Q Consensus       108 id~lv~~aG~  117 (302)
                      +|.++.++|.
T Consensus       209 ~d~vl~~~~~  218 (320)
T cd08243         209 FDKVLELVGT  218 (320)
T ss_pred             ceEEEECCCh
Confidence            9999988874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=94.55  E-value=0.21  Score=45.78  Aligned_cols=80  Identities=20%  Similarity=0.196  Sum_probs=52.5

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      .++.+++|.|+++++|.+++......|++|+.+.++.++.+.. +.+   +.+ .++  +..+ .++...+.....  ..
T Consensus       138 ~~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~---g~~-~v~--~~~~-~~~~~~~~~~~~--~~  207 (329)
T cd08250         138 KSGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFL-KSL---GCD-RPI--NYKT-EDLGEVLKKEYP--KG  207 (329)
T ss_pred             CCCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHH-HHc---CCc-eEE--eCCC-ccHHHHHHHhcC--CC
Confidence            4578999999999999999988888899999999887665544 333   321 122  2222 222223322222  35


Q ss_pred             ccEEEEcCCC
Q 022103          108 LDILVNNAGV  117 (302)
Q Consensus       108 id~lv~~aG~  117 (302)
                      +|.++++.|.
T Consensus       208 vd~v~~~~g~  217 (329)
T cd08250         208 VDVVYESVGG  217 (329)
T ss_pred             CeEEEECCcH
Confidence            8999988764

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=94.54  E-value=0.28  Score=44.68  Aligned_cols=81  Identities=20%  Similarity=0.184  Sum_probs=53.0

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      .++.+++|.|+++++|.++++.+...|++|+++.++.++.+.. +++   +.+   ...+..+....+++ .+... ...
T Consensus       137 ~~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~---g~~---~~~~~~~~~~~~~~-~~~~~-~~~  207 (323)
T cd05282         137 PPGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEEL-KAL---GAD---EVIDSSPEDLAQRV-KEATG-GAG  207 (323)
T ss_pred             CCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHHHH-Hhc---CCC---EEecccchhHHHHH-HHHhc-CCC
Confidence            4578999999999999999999999999999998888765544 332   321   11222222222222 22211 136


Q ss_pred             ccEEEEcCCC
Q 022103          108 LDILVNNAGV  117 (302)
Q Consensus       108 id~lv~~aG~  117 (302)
                      +|.++.+.|.
T Consensus       208 ~d~vl~~~g~  217 (323)
T cd05282         208 ARLALDAVGG  217 (323)
T ss_pred             ceEEEECCCC
Confidence            8999998875

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2

Probab=94.48  E-value=0.24  Score=46.13  Aligned_cols=31  Identities=35%  Similarity=0.556  Sum_probs=26.3

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCC-EEEEEecC
Q 022103           32 IAIVTGANKGIGFALVKRLAELGL-TVILTARD   63 (302)
Q Consensus        32 ~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~   63 (302)
                      +|+|.|+ ||+|-++++.|+..|. ++.+++.+
T Consensus         1 kVlIVGa-GGlG~EiaKnLal~Gvg~ItIvD~D   32 (312)
T cd01489           1 KVLVVGA-GGIGCELLKNLVLTGFGEIHIIDLD   32 (312)
T ss_pred             CEEEECC-CHHHHHHHHHHHHhcCCeEEEEcCC
Confidence            3788887 8899999999999997 58887764

UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins

Probab=94.48  E-value=0.47  Score=43.70  Aligned_cols=110  Identities=18%  Similarity=0.213  Sum_probs=63.0

Q ss_pred             EEEeCCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHhhCC----CceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           33 AIVTGANKGIGFALVKRLAELGL-TVILTARDVERGQRAVESLSEKG----LPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        33 vlItGas~gIG~ala~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~----~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      +.|.|+ |.+|..+|..|+.+|. +|++++++++.++.....+.+..    .... +.. .+|.+++           ..
T Consensus         1 I~IIGa-G~vG~~ia~~la~~~l~eV~L~Di~e~~~~g~~~dl~~~~~~~~~~~~-I~~-t~d~~~l-----------~d   66 (300)
T cd01339           1 ISIIGA-GNVGATLAQLLALKELGDVVLLDIVEGLPQGKALDISQAAPILGSDTK-VTG-TNDYEDI-----------AG   66 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhCCCcEEEEEeCCCcHHHHHHHHHHHhhhhcCCCeE-EEE-cCCHHHh-----------CC
Confidence            468898 8899999999999876 99999999775543333232221    1111 111 1222221           36


Q ss_pred             ccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEec
Q 022103          108 LDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNIS  165 (302)
Q Consensus       108 id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vs  165 (302)
                      .|++|.++|....+  ..+..   +.+.-|    +-+.+.+.+.|.+....+.+|++|
T Consensus        67 ADiVIit~g~p~~~--~~~r~---e~~~~n----~~i~~~i~~~i~~~~p~~~iIv~s  115 (300)
T cd01339          67 SDVVVITAGIPRKP--GMSRD---DLLGTN----AKIVKEVAENIKKYAPNAIVIVVT  115 (300)
T ss_pred             CCEEEEecCCCCCc--CCCHH---HHHHHH----HHHHHHHHHHHHHHCCCeEEEEec
Confidence            79999999975432  12222   233334    334555555555543445556665

Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=94.47  E-value=0.29  Score=45.23  Aligned_cols=80  Identities=23%  Similarity=0.243  Sum_probs=52.7

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCc
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAAL  108 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~i  108 (302)
                      ++.+++|.|+++++|.+++..+.+.|++|+.+.++.++.+.. +++   +.+.   ..+..+.+..+++.+...  ...+
T Consensus       165 ~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~---g~~~---v~~~~~~~~~~~~~~~~~--~~~v  235 (341)
T cd08297         165 PGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELA-KEL---GADA---FVDFKKSDDVEAVKELTG--GGGA  235 (341)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-HHc---CCcE---EEcCCCccHHHHHHHHhc--CCCC
Confidence            478999999999999999999999999999999998766544 333   2211   122233222233322221  1368


Q ss_pred             cEEEEcCCC
Q 022103          109 DILVNNAGV  117 (302)
Q Consensus       109 d~lv~~aG~  117 (302)
                      |.++++.+.
T Consensus       236 d~vl~~~~~  244 (341)
T cd08297         236 HAVVVTAVS  244 (341)
T ss_pred             CEEEEcCCc
Confidence            999976654

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=94.45  E-value=0.39  Score=43.94  Aligned_cols=80  Identities=15%  Similarity=0.273  Sum_probs=51.8

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCc
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAAL  108 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~i  108 (302)
                      ++.+++|.|+++++|.+++..+...|++++.+.++.++.+.+ ..+   +... +  .+..+.+.+.+.+..... ...+
T Consensus       140 ~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~---g~~~-~--~~~~~~~~~~~~~~~~~~-~~~~  211 (334)
T PTZ00354        140 KGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFC-KKL---AAII-L--IRYPDEEGFAPKVKKLTG-EKGV  211 (334)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc---CCcE-E--EecCChhHHHHHHHHHhC-CCCc
Confidence            578999999999999999999999999988888888776655 222   3221 1  222222212222222211 1358


Q ss_pred             cEEEEcCC
Q 022103          109 DILVNNAG  116 (302)
Q Consensus       109 d~lv~~aG  116 (302)
                      |.++.+.|
T Consensus       212 d~~i~~~~  219 (334)
T PTZ00354        212 NLVLDCVG  219 (334)
T ss_pred             eEEEECCc
Confidence            99998876

>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins

Probab=94.40  E-value=0.2  Score=37.16  Aligned_cols=36  Identities=33%  Similarity=0.386  Sum_probs=32.0

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHc-CCEEEEEec
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAEL-GLTVILTAR   62 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~-G~~V~l~~r   62 (302)
                      .++++++++|.|. |.+|+.++..|.+. +.+|.+.+|
T Consensus        19 ~~~~~~~v~i~G~-G~~g~~~a~~l~~~~~~~v~v~~r   55 (86)
T cd05191          19 KSLKGKTVVVLGA-GEVGKGIAKLLADEGGKKVVLCDR   55 (86)
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC
Confidence            5588999999999 99999999999998 567888877

Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=94.39  E-value=0.27  Score=46.14  Aligned_cols=40  Identities=23%  Similarity=0.165  Sum_probs=35.8

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhh
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVER   66 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~   66 (302)
                      ..+.|+++.|.|. |.||+++|+.|...|++|++.+|+.+.
T Consensus       142 ~~l~g~~VgIIG~-G~IG~~vA~~L~~~G~~V~~~d~~~~~  181 (330)
T PRK12480        142 KPVKNMTVAIIGT-GRIGAATAKIYAGFGATITAYDAYPNK  181 (330)
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCChhH
Confidence            4689999999988 669999999999999999999998754

>TIGR01771 L-LDH-NAD L-lactate dehydrogenase

Probab=94.34  E-value=0.45  Score=44.01  Aligned_cols=108  Identities=19%  Similarity=0.263  Sum_probs=68.5

Q ss_pred             EeCCCchHHHHHHHHHHHcCC--EEEEEecChhhHHHHHHHHhhCC----CceeEEEeeCCCHHHHHHHHHHHHhhCCCc
Q 022103           35 VTGANKGIGFALVKRLAELGL--TVILTARDVERGQRAVESLSEKG----LPVNFFQLDVSDPSSIEAFVSWFKSNFAAL  108 (302)
Q Consensus        35 ItGas~gIG~ala~~l~~~G~--~V~l~~r~~~~~~~~~~~l~~~~----~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~i  108 (302)
                      |.|+ |.+|..+|..|+..+.  ++++++.+.++++..+..+.+..    .++.+.   ..+.+++           ...
T Consensus         1 iIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~i~---~~~~~~~-----------~da   65 (299)
T TIGR01771         1 IIGA-GNVGSSTAFALLNQGIADEIVLIDINKDKAEGEAMDLQHAASFLPTPKKIR---SGDYSDC-----------KDA   65 (299)
T ss_pred             CCCc-CHHHHHHHHHHHhcCCCCEEEEEeCCCChhhHHHHHHHHhhcccCCCeEEe---cCCHHHH-----------CCC
Confidence            3465 8899999999998874  69999998887777777776532    122222   1233322           478


Q ss_pred             cEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecC
Q 022103          109 DILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISS  166 (302)
Q Consensus       109 d~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS  166 (302)
                      |++|.+||....+  .++   -.+.++.|..    +.+.+.+.+.+....+.++++|-
T Consensus        66 DivVitag~~rk~--g~~---R~dll~~N~~----i~~~~~~~i~~~~p~~~vivvsN  114 (299)
T TIGR01771        66 DLVVITAGAPQKP--GET---RLELVGRNVR----IMKSIVPEVVKSGFDGIFLVATN  114 (299)
T ss_pred             CEEEECCCCCCCC--CCC---HHHHHHHHHH----HHHHHHHHHHHhCCCeEEEEeCC
Confidence            9999999986432  233   3345666544    44555555555434567777663

This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases.

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=94.34  E-value=0.26  Score=46.25  Aligned_cols=79  Identities=20%  Similarity=0.282  Sum_probs=50.4

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcCCE-EEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELGLT-VILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G~~-V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      +|.+++|.|+ |++|...+..+...|++ |+.++++.++++.+ +++   |.. .+  .|..+.+..+.+ .+... ...
T Consensus       176 ~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~-~~~---Ga~-~~--i~~~~~~~~~~i-~~~~~-~~g  245 (358)
T TIGR03451       176 RGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVDIDDRKLEWA-REF---GAT-HT--VNSSGTDPVEAI-RALTG-GFG  245 (358)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHc---CCc-eE--EcCCCcCHHHHH-HHHhC-CCC
Confidence            5889999985 99999998888888985 88888888776554 333   322 11  233332222222 22211 125


Q ss_pred             ccEEEEcCCC
Q 022103          108 LDILVNNAGV  117 (302)
Q Consensus       108 id~lv~~aG~  117 (302)
                      +|+++.++|.
T Consensus       246 ~d~vid~~g~  255 (358)
T TIGR03451       246 ADVVIDAVGR  255 (358)
T ss_pred             CCEEEECCCC
Confidence            8999999885

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=94.33  E-value=0.24  Score=46.77  Aligned_cols=78  Identities=19%  Similarity=0.266  Sum_probs=50.9

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELGL-TVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      ++.+++|.|+ |+||..++..+...|+ +|++++++.++++.+ +++   |..   ...|..+.+ +.+.+.+...  +.
T Consensus       191 ~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a-~~~---Ga~---~~i~~~~~~-~~~~i~~~~~--~g  259 (371)
T cd08281         191 PGQSVAVVGL-GGVGLSALLGAVAAGASQVVAVDLNEDKLALA-REL---GAT---ATVNAGDPN-AVEQVRELTG--GG  259 (371)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHH-HHc---CCc---eEeCCCchh-HHHHHHHHhC--CC
Confidence            4789999985 8999998888888899 699999988776644 333   322   112333332 2222222222  36


Q ss_pred             ccEEEEcCCC
Q 022103          108 LDILVNNAGV  117 (302)
Q Consensus       108 id~lv~~aG~  117 (302)
                      +|+++.++|.
T Consensus       260 ~d~vid~~G~  269 (371)
T cd08281         260 VDYAFEMAGS  269 (371)
T ss_pred             CCEEEECCCC
Confidence            8999999875

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=94.33  E-value=0.11  Score=47.51  Aligned_cols=44  Identities=20%  Similarity=0.382  Sum_probs=37.9

Q ss_pred             CcEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHH
Q 022103           30 ETIAIVTGANKGIGFALVKRLAELGL-TVILTARDVERGQRAVESL   74 (302)
Q Consensus        30 ~k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~~~~~~~~~~~l   74 (302)
                      +++++|.|+ ||.+++++..|++.|+ +|.+++|+.++.+..++.+
T Consensus       122 ~~~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~  166 (272)
T PRK12550        122 DLVVALRGS-GGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELY  166 (272)
T ss_pred             CCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHh
Confidence            468999997 8899999999999997 5999999998887776654

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=94.32  E-value=0.35  Score=45.53  Aligned_cols=80  Identities=15%  Similarity=0.277  Sum_probs=53.1

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCH-HHHHHHHHHHHhhC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGL-TVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP-SSIEAFVSWFKSNF  105 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~-~~~~~~~~~~~~~~  105 (302)
                      .+|.+++|.|+ |++|..+++.+...|+ +|++++++.++.+.+ +.+   |... +  .|..+. +++.+.+.++..  
T Consensus       186 ~~g~~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~-~~~---Ga~~-~--i~~~~~~~~~~~~v~~~~~--  255 (369)
T cd08301         186 KKGSTVAIFGL-GAVGLAVAEGARIRGASRIIGVDLNPSKFEQA-KKF---GVTE-F--VNPKDHDKPVQEVIAEMTG--  255 (369)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHc---CCce-E--EcccccchhHHHHHHHHhC--
Confidence            35889999985 8999999888888898 799999998776644 333   3221 1  122221 234444444332  


Q ss_pred             CCccEEEEcCCC
Q 022103          106 AALDILVNNAGV  117 (302)
Q Consensus       106 g~id~lv~~aG~  117 (302)
                      +.+|+++.+.|.
T Consensus       256 ~~~d~vid~~G~  267 (369)
T cd08301         256 GGVDYSFECTGN  267 (369)
T ss_pred             CCCCEEEECCCC
Confidence            268999999875

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like

Probab=94.29  E-value=0.35  Score=43.13  Aligned_cols=30  Identities=37%  Similarity=0.646  Sum_probs=25.6

Q ss_pred             EEEeCCCchHHHHHHHHHHHcCC-EEEEEecC
Q 022103           33 AIVTGANKGIGFALVKRLAELGL-TVILTARD   63 (302)
Q Consensus        33 vlItGas~gIG~ala~~l~~~G~-~V~l~~r~   63 (302)
                      |+|.|+ ||+|.++++.|+..|. ++.+++.+
T Consensus         2 VlvvG~-GGlG~eilk~La~~Gvg~i~ivD~D   32 (234)
T cd01484           2 VLLVGA-GGIGCELLKNLALMGFGQIHVIDMD   32 (234)
T ss_pred             EEEECC-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            678875 7899999999999997 58888775

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou

>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]

Probab=94.27  E-value=0.28  Score=45.93  Aligned_cols=43  Identities=21%  Similarity=0.281  Sum_probs=37.6

Q ss_pred             ccccccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChh
Q 022103           22 SSTKWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVE   65 (302)
Q Consensus        22 ~~~~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~   65 (302)
                      .....++.||++-|.|- |.||+++|+.+...|++|+..+|+..
T Consensus       138 ~~~~~~l~gktvGIiG~-GrIG~avA~r~~~Fgm~v~y~~~~~~  180 (324)
T COG1052         138 PLLGFDLRGKTLGIIGL-GRIGQAVARRLKGFGMKVLYYDRSPN  180 (324)
T ss_pred             cccccCCCCCEEEEECC-CHHHHHHHHHHhcCCCEEEEECCCCC
Confidence            34456799999999998 66999999999988999999999874

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=94.27  E-value=0.13  Score=51.66  Aligned_cols=73  Identities=12%  Similarity=0.142  Sum_probs=54.5

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCccE
Q 022103           31 TIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDI  110 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id~  110 (302)
                      ..++|.|+ |-+|+.+++.|.++|++|+++++++++.++..+    .  ....+.+|.+|++.+++.--      .+.|.
T Consensus       418 ~hiiI~G~-G~~G~~la~~L~~~g~~vvvId~d~~~~~~~~~----~--g~~~i~GD~~~~~~L~~a~i------~~a~~  484 (558)
T PRK10669        418 NHALLVGY-GRVGSLLGEKLLAAGIPLVVIETSRTRVDELRE----R--GIRAVLGNAANEEIMQLAHL------DCARW  484 (558)
T ss_pred             CCEEEECC-ChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH----C--CCeEEEcCCCCHHHHHhcCc------cccCE
Confidence            45677777 669999999999999999999999877655532    2  46789999999887654221      35676


Q ss_pred             EEEcCC
Q 022103          111 LVNNAG  116 (302)
Q Consensus       111 lv~~aG  116 (302)
                      ++.+.+
T Consensus       485 viv~~~  490 (558)
T PRK10669        485 LLLTIP  490 (558)
T ss_pred             EEEEcC
Confidence            665544

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=94.25  E-value=0.24  Score=46.68  Aligned_cols=75  Identities=24%  Similarity=0.417  Sum_probs=49.9

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCc
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAAL  108 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~i  108 (302)
                      +|++++|.|+ |+||..++..+...|++|++++.+.++....++++   |... +  .|..+.+.+.+       ..+.+
T Consensus       183 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~~---Ga~~-v--i~~~~~~~~~~-------~~~~~  248 (360)
T PLN02586        183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRL---GADS-F--LVSTDPEKMKA-------AIGTM  248 (360)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHHhC---CCcE-E--EcCCCHHHHHh-------hcCCC
Confidence            6889999775 89999999888888999988888776655554444   3221 1  12233322222       12358


Q ss_pred             cEEEEcCCC
Q 022103          109 DILVNNAGV  117 (302)
Q Consensus       109 d~lv~~aG~  117 (302)
                      |+++.++|.
T Consensus       249 D~vid~~g~  257 (360)
T PLN02586        249 DYIIDTVSA  257 (360)
T ss_pred             CEEEECCCC
Confidence            999998884

>PRK14851 hypothetical protein; Provisional

Probab=94.25  E-value=0.37  Score=49.57  Aligned_cols=36  Identities=17%  Similarity=0.259  Sum_probs=30.6

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGL-TVILTARD   63 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~   63 (302)
                      .+++.+|+|.|+ ||+|..+++.|+..|. ++++++.+
T Consensus        40 kL~~~~VlIvG~-GGlGs~va~~Lar~GVG~l~LvD~D   76 (679)
T PRK14851         40 RLAEAKVAIPGM-GGVGGVHLITMVRTGIGRFHIADFD   76 (679)
T ss_pred             HHhcCeEEEECc-CHHHHHHHHHHHHhCCCeEEEEcCC
Confidence            477899999996 7899999999999997 57777653

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=94.23  E-value=0.29  Score=46.50  Aligned_cols=75  Identities=24%  Similarity=0.423  Sum_probs=50.1

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCc
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAAL  108 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~i  108 (302)
                      .+.+++|.|+ |++|..++......|++|++++++.++..+.++++   |.+. +  .|..+.+.+.+       ..+.+
T Consensus       178 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~~l---Ga~~-~--i~~~~~~~v~~-------~~~~~  243 (375)
T PLN02178        178 SGKRLGVNGL-GGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRL---GADS-F--LVTTDSQKMKE-------AVGTM  243 (375)
T ss_pred             CCCEEEEEcc-cHHHHHHHHHHHHcCCeEEEEeCChHHhHHHHHhC---CCcE-E--EcCcCHHHHHH-------hhCCC
Confidence            5889999986 89999999988888999999988766544444443   3221 1  22223222222       12358


Q ss_pred             cEEEEcCCC
Q 022103          109 DILVNNAGV  117 (302)
Q Consensus       109 d~lv~~aG~  117 (302)
                      |+++.++|.
T Consensus       244 D~vid~~G~  252 (375)
T PLN02178        244 DFIIDTVSA  252 (375)
T ss_pred             cEEEECCCc
Confidence            999999875

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=94.23  E-value=0.27  Score=41.01  Aligned_cols=37  Identities=14%  Similarity=0.317  Sum_probs=33.0

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecC
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARD   63 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~   63 (302)
                      ++++|+.++|.|| |-+|...++.|.+.|++|++++..
T Consensus         9 l~l~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIsp~   45 (157)
T PRK06719          9 FNLHNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVSPE   45 (157)
T ss_pred             EEcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCc
Confidence            5799999999998 669999999999999999988543

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=94.23  E-value=0.084  Score=46.78  Aligned_cols=37  Identities=19%  Similarity=0.329  Sum_probs=33.6

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCC---EEEEEecC
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGL---TVILTARD   63 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~---~V~l~~r~   63 (302)
                      ..+++++++|.|+ |+.|++++..|.+.|.   +|.+++|+
T Consensus        21 ~~l~~~rvlvlGA-GgAg~aiA~~L~~~G~~~~~i~ivdr~   60 (226)
T cd05311          21 KKIEEVKIVINGA-GAAGIAIARLLLAAGAKPENIVVVDSK   60 (226)
T ss_pred             CCccCCEEEEECc-hHHHHHHHHHHHHcCcCcceEEEEeCC
Confidence            4678899999999 8899999999999997   59999998

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>TIGR00446 nop2p NOL1/NOP2/sun family putative RNA methylase

Probab=94.21  E-value=1.8  Score=39.06  Aligned_cols=124  Identities=12%  Similarity=0.107  Sum_probs=73.6

Q ss_pred             cCcEEEEeCCC-chHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCC-ceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           29 KETIAIVTGAN-KGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGL-PVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        29 ~~k~vlItGas-~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      +|.+|+=.|++ |+....++..+...| .|+.++.+...++.+.+.+...+. .+.++..|..+..          ...+
T Consensus        71 ~g~~VLDl~ag~G~kt~~la~~~~~~g-~v~a~D~~~~~l~~~~~n~~~~g~~~v~~~~~D~~~~~----------~~~~  139 (264)
T TIGR00446        71 PPERVLDMAAAPGGKTTQISALMKNEG-AIVANEFSKSRTKVLIANINRCGVLNVAVTNFDGRVFG----------AAVP  139 (264)
T ss_pred             CcCEEEEECCCchHHHHHHHHHcCCCC-EEEEEcCCHHHHHHHHHHHHHcCCCcEEEecCCHHHhh----------hhcc
Confidence            45566666664 777877777665445 899999999999888888876653 4566666654321          1124


Q ss_pred             CccEEEEcCCCCCCCCCCCCHHHH----HHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecC
Q 022103          107 ALDILVNNAGVSFNDIYKNTVEHA----ETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISS  166 (302)
Q Consensus       107 ~id~lv~~aG~~~~~~~~~~~e~~----~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS  166 (302)
                      .+|.|+.++-.+..+.....++..    .+.+..-..-...+++.+.+.++.   .|++|+.+-
T Consensus       140 ~fD~Vl~D~Pcsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~iL~~a~~~lkp---gG~lvYstc  200 (264)
T TIGR00446       140 KFDAILLDAPCSGEGVIRKDPSRKKNWSEEDIQEISALQKELIDSAFDALKP---GGVLVYSTC  200 (264)
T ss_pred             CCCEEEEcCCCCCCcccccChhhhhcCCHHHHHHHHHHHHHHHHHHHHhcCC---CCEEEEEeC
Confidence            689999887543322222222221    111111122234477777777653   488887653

>PRK07574 formate dehydrogenase; Provisional

Probab=94.19  E-value=0.26  Score=47.20  Aligned_cols=38  Identities=24%  Similarity=0.349  Sum_probs=34.8

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecCh
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDV   64 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~   64 (302)
                      ..+.|+++.|.|. |.||+++|+.|...|++|+..+|+.
T Consensus       188 ~~L~gktVGIvG~-G~IG~~vA~~l~~fG~~V~~~dr~~  225 (385)
T PRK07574        188 YDLEGMTVGIVGA-GRIGLAVLRRLKPFDVKLHYTDRHR  225 (385)
T ss_pred             eecCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCCC
Confidence            5689999999998 6699999999999999999999876

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=94.19  E-value=0.15  Score=38.19  Aligned_cols=42  Identities=21%  Similarity=0.310  Sum_probs=34.5

Q ss_pred             EEEeCCCchHHHHHHHHHHHcC---CEEEEE-ecChhhHHHHHHHHh
Q 022103           33 AIVTGANKGIGFALVKRLAELG---LTVILT-ARDVERGQRAVESLS   75 (302)
Q Consensus        33 vlItGas~gIG~ala~~l~~~G---~~V~l~-~r~~~~~~~~~~~l~   75 (302)
                      +.|. |+|-+|.++++.|.+.|   .+|.++ .|++++.++..++..
T Consensus         2 I~iI-G~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~   47 (96)
T PF03807_consen    2 IGII-GAGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYG   47 (96)
T ss_dssp             EEEE-STSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCT
T ss_pred             EEEE-CCCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhc
Confidence            3444 55889999999999999   899966 999999888877653

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated

Probab=94.14  E-value=0.32  Score=46.31  Aligned_cols=78  Identities=18%  Similarity=0.218  Sum_probs=55.0

Q ss_pred             ccccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHh
Q 022103           24 TKWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKS  103 (302)
Q Consensus        24 ~~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~  103 (302)
                      +..+.+.++++|+|++ .+|+.+++.+.+.|++|++++.++......   ..    + ..+..|..|.+.+.+++++.  
T Consensus         6 ~~~~~~~~~ilIiG~g-~~~~~~~~a~~~~G~~v~~~~~~~~~~~~~---~a----d-~~~~~~~~d~~~l~~~~~~~--   74 (395)
T PRK09288          6 TPLSPSATRVMLLGSG-ELGKEVAIEAQRLGVEVIAVDRYANAPAMQ---VA----H-RSHVIDMLDGDALRAVIERE--   74 (395)
T ss_pred             CCCCCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCCCCchHH---hh----h-heEECCCCCHHHHHHHHHHh--
Confidence            3444567799999975 699999999999999999998876431111   10    1 24567788888777777642  


Q ss_pred             hCCCccEEEEcC
Q 022103          104 NFAALDILVNNA  115 (302)
Q Consensus       104 ~~g~id~lv~~a  115 (302)
                         .+|.++...
T Consensus        75 ---~id~vi~~~   83 (395)
T PRK09288         75 ---KPDYIVPEI   83 (395)
T ss_pred             ---CCCEEEEee
Confidence               688887654

>TIGR00537 hemK_rel_arch HemK-related putative methylase

Probab=94.13  E-value=1.8  Score=36.43  Aligned_cols=75  Identities=16%  Similarity=0.162  Sum_probs=54.1

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      .++++++=.|++.|.   ++..+++.|.+|+.++.+++-++.+.+.+...+..+.++.+|+.+..            .+.
T Consensus        18 ~~~~~vLdlG~G~G~---~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~------------~~~   82 (179)
T TIGR00537        18 LKPDDVLEIGAGTGL---VAIRLKGKGKCILTTDINPFAVKELRENAKLNNVGLDVVMTDLFKGV------------RGK   82 (179)
T ss_pred             cCCCeEEEeCCChhH---HHHHHHhcCCEEEEEECCHHHHHHHHHHHHHcCCceEEEEccccccc------------CCc
Confidence            456778888887663   45556667779999999998888777777665556777888865421            147


Q ss_pred             ccEEEEcCCC
Q 022103          108 LDILVNNAGV  117 (302)
Q Consensus       108 id~lv~~aG~  117 (302)
                      +|+++.|.-.
T Consensus        83 fD~Vi~n~p~   92 (179)
T TIGR00537        83 FDVILFNPPY   92 (179)
T ss_pred             ccEEEECCCC
Confidence            8999988653

The gene hemK from E. coli was found to contribute to heme biosynthesis and originally suggested to be protoporphyrinogen oxidase (Medline 95189105). Functional analysis of the nearest homolog in Saccharomyces cerevisiae, YNL063w, finds it is not protoporphyrinogen oxidase and sequence analysis suggests that HemK homologs have S-adenosyl-methionine-dependent methyltransferase activity (Medline 99237242). Homologs are found, usually in a single copy, in nearly all completed genomes, but varying somewhat in apparent domain architecture. This model represents an archaeal and eukaryotic protein family that lacks an N-terminal domain found in HemK and its eubacterial homologs. It is found in a single copy in the first six completed archaeal and eukaryotic genomes.

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=94.12  E-value=0.29  Score=45.12  Aligned_cols=79  Identities=22%  Similarity=0.258  Sum_probs=48.2

Q ss_pred             CcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCcc
Q 022103           30 ETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALD  109 (302)
Q Consensus        30 ~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id  109 (302)
                      +++++++||+|++|..++......|++|+.+.++.++.+.+.+ +   +.+. ++  |..+.+..+. +.+... ...+|
T Consensus       144 ~~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~~~-~---g~~~-~i--~~~~~~~~~~-v~~~~~-~~~~d  214 (324)
T cd08291         144 AKAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLLKK-I---GAEY-VL--NSSDPDFLED-LKELIA-KLNAT  214 (324)
T ss_pred             CcEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-c---CCcE-EE--ECCCccHHHH-HHHHhC-CCCCc
Confidence            3444555999999999988777779999999998877655432 3   3221 22  2222222222 222211 12589


Q ss_pred             EEEEcCCC
Q 022103          110 ILVNNAGV  117 (302)
Q Consensus       110 ~lv~~aG~  117 (302)
                      +++.+.|.
T Consensus       215 ~vid~~g~  222 (324)
T cd08291         215 IFFDAVGG  222 (324)
T ss_pred             EEEECCCc
Confidence            99998874

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.03  E-value=0.23  Score=45.85  Aligned_cols=83  Identities=14%  Similarity=0.109  Sum_probs=55.8

Q ss_pred             ccccccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEE-ecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHH
Q 022103           22 SSTKWWSKETIAIVTGANKGIGFALVKRLAELGLTVILT-ARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSW  100 (302)
Q Consensus        22 ~~~~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~-~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~  100 (302)
                      .++..+++||+++|.|-++-+|+.+|..|.++|+.|.++ .|+. .+++..+       ...++..-+.+...+....  
T Consensus       150 ~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~-~l~e~~~-------~ADIVIsavg~~~~v~~~~--  219 (296)
T PRK14188        150 RRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTR-DLPAVCR-------RADILVAAVGRPEMVKGDW--  219 (296)
T ss_pred             HHhCCCCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCC-CHHHHHh-------cCCEEEEecCChhhcchhe--
Confidence            344567999999999999999999999999999999999 4665 2332222       2334444455555444332  


Q ss_pred             HHhhCCCccEEEEcCCCCC
Q 022103          101 FKSNFAALDILVNNAGVSF  119 (302)
Q Consensus       101 ~~~~~g~id~lv~~aG~~~  119 (302)
                           -+...+|...|+..
T Consensus       220 -----lk~GavVIDvGin~  233 (296)
T PRK14188        220 -----IKPGATVIDVGINR  233 (296)
T ss_pred             -----ecCCCEEEEcCCcc
Confidence                 13455666667653

>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]

Probab=94.01  E-value=0.29  Score=43.55  Aligned_cols=75  Identities=20%  Similarity=0.167  Sum_probs=55.7

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      +.|+++|=.|++||   -++.-+|+.|++|+.++-+.+..+.+..+-.+.+..+.+          ....++.+.+..+.
T Consensus        58 l~g~~vLDvGCGgG---~Lse~mAr~Ga~VtgiD~se~~I~~Ak~ha~e~gv~i~y----------~~~~~edl~~~~~~  124 (243)
T COG2227          58 LPGLRVLDVGCGGG---ILSEPLARLGASVTGIDASEKPIEVAKLHALESGVNIDY----------RQATVEDLASAGGQ  124 (243)
T ss_pred             CCCCeEEEecCCcc---HhhHHHHHCCCeeEEecCChHHHHHHHHhhhhccccccc----------hhhhHHHHHhcCCC
Confidence            79999999999999   689999999999999999998888777666655533212          22233444444478


Q ss_pred             ccEEEEcC
Q 022103          108 LDILVNNA  115 (302)
Q Consensus       108 id~lv~~a  115 (302)
                      +|+|+|.=
T Consensus       125 FDvV~cmE  132 (243)
T COG2227         125 FDVVTCME  132 (243)
T ss_pred             ccEEEEhh
Confidence            99997753

>PRK02842 light-independent protochlorophyllide reductase subunit N; Provisional

Probab=94.00  E-value=0.46  Score=46.14  Aligned_cols=122  Identities=13%  Similarity=0.019  Sum_probs=79.4

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHH-cCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhh
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAE-LGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSN  104 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~-~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~  104 (302)
                      ..+.||+++|.|. +....++++.|.+ .|++++.++-.....+...+.+......+  ...|=.|..++.+.+++.   
T Consensus       286 ~~l~Gkrvai~g~-~~~~~~la~~L~eelGm~~v~v~t~~~~~~~~~~~~~~l~~~~--~v~~~~D~~~l~~~i~~~---  359 (427)
T PRK02842        286 ELLRGKRVFFLPD-SQLEIPLARFLSRECGMELVEVGTPYLNRRFLAAELALLPDGV--RIVEGQDVERQLDRIRAL---  359 (427)
T ss_pred             hhcCCcEEEEECC-chhHHHHHHHHHHhCCCEEEEeCCCCCCHHHHHHHHHhccCCC--EEEECCCHHHHHHHHHHc---
Confidence            3478999999985 4689999999998 89999887764432222222232222222  234556777777666654   


Q ss_pred             CCCccEEEEcCCCCCC----CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcC
Q 022103          105 FAALDILVNNAGVSFN----DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRS  155 (302)
Q Consensus       105 ~g~id~lv~~aG~~~~----~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~  155 (302)
                        ++|++|-+.....+    .+.-.+.-+....-.+-+.|...++..+...|.++
T Consensus       360 --~pDllig~~~~~~pl~r~GfP~~dr~~~~~~p~~Gy~G~~~l~~~~~~~l~~~  412 (427)
T PRK02842        360 --RPDLVVCGLGLANPLEAEGITTKWSIEFVFTPIHGFEQAGDLAELFTRPLRRR  412 (427)
T ss_pred             --CCCEEEccCccCCchhhcCCceeEEEeeeeecccchhhHHHHHHHHHHHhhhh
Confidence              89999988643322    22222222333456778889999999998888765

>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases

Probab=93.92  E-value=0.47  Score=44.90  Aligned_cols=79  Identities=16%  Similarity=0.277  Sum_probs=51.7

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCH-HHHHHHHHHHHhhCC
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELGL-TVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP-SSIEAFVSWFKSNFA  106 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~-~~~~~~~~~~~~~~g  106 (302)
                      ++.+++|.| ++++|.+++..+...|+ +|+.++++.++++.+ +.+   |.. .+  .+..+. +.+.+.+.+...  +
T Consensus       190 ~g~~VlV~G-~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a-~~l---Ga~-~~--i~~~~~~~~~~~~v~~~~~--~  259 (373)
T cd08299         190 PGSTCAVFG-LGGVGLSAIMGCKAAGASRIIAVDINKDKFAKA-KEL---GAT-EC--INPQDYKKPIQEVLTEMTD--G  259 (373)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHc---CCc-eE--ecccccchhHHHHHHHHhC--C
Confidence            478999996 58999999999999999 799999988776655 333   221 11  222211 112333333322  3


Q ss_pred             CccEEEEcCCC
Q 022103          107 ALDILVNNAGV  117 (302)
Q Consensus       107 ~id~lv~~aG~  117 (302)
                      .+|.++.++|.
T Consensus       260 ~~d~vld~~g~  270 (373)
T cd08299         260 GVDFSFEVIGR  270 (373)
T ss_pred             CCeEEEECCCC
Confidence            69999999875

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically

>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]

Probab=93.91  E-value=0.33  Score=43.31  Aligned_cols=80  Identities=20%  Similarity=0.270  Sum_probs=50.9

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecCh-------------------hhHHHHHHHHhhCCCceeEEE-e
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGL-TVILTARDV-------------------ERGQRAVESLSEKGLPVNFFQ-L   86 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~-~   86 (302)
                      ++.-.|+|.|. ||+|...+.+|++.|. ++.+++-+.                   .+.+-..+.+...++.+.+.. -
T Consensus        28 l~~~~V~VvGi-GGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~  106 (263)
T COG1179          28 LKQAHVCVVGI-GGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAIN  106 (263)
T ss_pred             HhhCcEEEEec-CchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehH
Confidence            56778999998 7799999999999997 688876642                   233344444554455554443 2


Q ss_pred             eCCCHHHHHHHHHHHHhhCCCccEEEEc
Q 022103           87 DVSDPSSIEAFVSWFKSNFAALDILVNN  114 (302)
Q Consensus        87 Dlt~~~~~~~~~~~~~~~~g~id~lv~~  114 (302)
                      |+-+++.+.+++.      ..+|++|-+
T Consensus       107 ~f~t~en~~~~~~------~~~DyvIDa  128 (263)
T COG1179         107 DFITEENLEDLLS------KGFDYVIDA  128 (263)
T ss_pred             hhhCHhHHHHHhc------CCCCEEEEc
Confidence            3335555555544      356666543

>cd08230 glucose_DH Glucose dehydrogenase

Probab=93.89  E-value=0.37  Score=45.09  Aligned_cols=74  Identities=26%  Similarity=0.407  Sum_probs=48.7

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecC---hhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELGLTVILTARD---VERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~---~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      +|++++|+|+ |++|...+..+...|++|++++|+   .++++ .++++   |..  .  .|..+. ++.+    .. ..
T Consensus       172 ~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~-~~~~~---Ga~--~--v~~~~~-~~~~----~~-~~  236 (355)
T cd08230         172 NPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRRDPPDPKAD-IVEEL---GAT--Y--VNSSKT-PVAE----VK-LV  236 (355)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCHHHHH-HHHHc---CCE--E--ecCCcc-chhh----hh-hc
Confidence            6889999986 999999998888889999999984   44433 33333   332  2  233322 2222    11 12


Q ss_pred             CCccEEEEcCCC
Q 022103          106 AALDILVNNAGV  117 (302)
Q Consensus       106 g~id~lv~~aG~  117 (302)
                      +.+|++|.++|.
T Consensus       237 ~~~d~vid~~g~  248 (355)
T cd08230         237 GEFDLIIEATGV  248 (355)
T ss_pred             CCCCEEEECcCC
Confidence            469999999985

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>cd05295 MDH_like Malate dehydrogenase-like

Probab=93.85  E-value=0.6  Score=45.61  Aligned_cols=99  Identities=15%  Similarity=0.185  Sum_probs=62.1

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHc---C----CEEEEEec--ChhhHHHHHHHHhhCC----CceeEEEeeCCCHHHHHHH
Q 022103           31 TIAIVTGANKGIGFALVKRLAEL---G----LTVILTAR--DVERGQRAVESLSEKG----LPVNFFQLDVSDPSSIEAF   97 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~---G----~~V~l~~r--~~~~~~~~~~~l~~~~----~~~~~~~~Dlt~~~~~~~~   97 (302)
                      -+|+||||+|-||.++.-.+++-   |    ..+++++.  ..++++..+-++...-    ..+.+. .  .+.++    
T Consensus       124 ~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a~pll~~v~i~-~--~~~ea----  196 (452)
T cd05295         124 LQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLAFPLLRGISVT-T--DLDVA----  196 (452)
T ss_pred             eEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhHHhhcCCcEEE-E--CCHHH----
Confidence            57999999999999999999973   4    24677887  5667776666666432    112222 1  22222    


Q ss_pred             HHHHHhhCCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHH
Q 022103           98 VSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESL  148 (302)
Q Consensus        98 ~~~~~~~~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~  148 (302)
                             +...|++|..+|....+  ..+   ..+.++.|..-.-.+.+.+
T Consensus       197 -------~~daDvvIitag~prk~--G~~---R~DLL~~N~~Ifk~~g~~I  235 (452)
T cd05295         197 -------FKDAHVIVLLDDFLIKE--GED---LEGCIRSRVAICQLYGPLI  235 (452)
T ss_pred             -------hCCCCEEEECCCCCCCc--CCC---HHHHHHHHHHHHHHHHHHH
Confidence                   24789999999986432  233   4445666654444444433

These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=93.83  E-value=0.52  Score=43.64  Aligned_cols=76  Identities=20%  Similarity=0.301  Sum_probs=49.5

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCc
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAAL  108 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~i  108 (302)
                      +|.+++|+|+++++|.++++.....|++|+.+.++ ++ ....+++   +..   ...|..+.+..+.+    .. .+.+
T Consensus       162 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~-~~-~~~~~~~---g~~---~~~~~~~~~~~~~l----~~-~~~v  228 (350)
T cd08248         162 AGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCST-DA-IPLVKSL---GAD---DVIDYNNEDFEEEL----TE-RGKF  228 (350)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCc-ch-HHHHHHh---CCc---eEEECCChhHHHHH----Hh-cCCC
Confidence            48999999999999999999988889998888765 22 2233332   321   12333333322222    22 2469


Q ss_pred             cEEEEcCCC
Q 022103          109 DILVNNAGV  117 (302)
Q Consensus       109 d~lv~~aG~  117 (302)
                      |.++.+.|.
T Consensus       229 d~vi~~~g~  237 (350)
T cd08248         229 DVILDTVGG  237 (350)
T ss_pred             CEEEECCCh
Confidence            999988775

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	302
3o26_A	311	The Structure Of Salutaridine Reductase From Papave		1e-40
1wma_A	276	Crystal Structure Of Human Cbr1 In Complex With Hyd		1e-36
2pfg_A	276	Crystal Structure Of Human Cbr1 In Complex With Big		2e-36
1n5d_A	288	Crystal Structure Of Porcine Testicular Carbonyl Re		1e-33
2hrb_A	274	Crystal Structure Of Human Carbonyl Reductase 3, Co		4e-33
1vl8_A	267	Crystal Structure Of Gluconate 5-dehydrogenase (tm0		1e-17
3rsh_A	251	Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reduc		6e-17
3tzc_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		2e-16
3tzk_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		4e-16
1i01_A	244	Crystal Structure Of Beta-Ketoacyl [acyl Carrier Pr		5e-16
3u09_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		5e-16
3ftp_A	270	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		6e-16
3tzh_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		6e-16
1q7c_A	244	The Structure Of Betaketoacyl-[acp] Reductase Y151f		2e-15
3sj7_A	252	Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) F		4e-15
3op4_A	248	Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carr		2e-14
3rd5_A	291	Crystal Structure Of A Putative Uncharacterized Pro		2e-14
3rkr_A	262	Crystal Structure Of A Metagenomic Short-Chain Oxid		3e-14
1w4z_A	281	Structure Of Actinorhodin Polyketide (Actiii) Reduc		4e-14
2rh4_A	277	Actinorhodin Ketoreductase, Actkr, With Nadph And I		4e-14
4dbz_A	281	Crystal Structure Of V151l Actinorhodin Polyketide		4e-14
1x7g_A	261	Actinorhodin Polyketide Ketoreductase, Act Kr, With		4e-14
2hq1_A	247	Crystal Structure Of Orf 1438 A Putative GlucoseRIB		4e-14
4dc1_A	281	Crystal Structure Of Y202f Actinorhodin Polyketide		5e-14
3lyl_A	247	Structure Of 3-Oxoacyl-Acylcarrier Protein Reductas		5e-14
3csd_B	281	Actinorhodin Polyketide Ketoreductase Mutant P94l B		7e-14
2rhr_B	277	P94l Actinorhodin Ketordeuctase Mutant, With Nadph		7e-14
3osu_A	246	Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Pro		7e-14
3ai1_A	263	The Crystal Structure Of L-Sorbose Reductase From G		2e-13
4afn_A	269	Crystal Structure Of 3-ketoacyl-(acyl-carrier-prote		2e-13
4dc0_A	281	Crystal Structure Of F189w Actinorhodin Polyketide		2e-13
2yz7_A	260	X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase F		2e-13
2uvd_A	246	The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier		3e-13
3asu_A	248	Crystal Structure Of Serine Dehydrogenase From Esch		3e-13
2cf2_E	226	Architecture Of Mammalian Fatty Acid Synthase Lengt		4e-13
3ai3_A	263	The Crystal Structure Of L-Sorbose Reductase From G		5e-13
3u5t_A	267	The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr		7e-13
2pnf_A	248	Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-		8e-13
1geg_A	256	Cryatal Structure Analysis Of Meso-2,3-Butanediol D		9e-13
1ae1_A	273	Tropinone Reductase-I Complex With Nadp Length = 27		1e-12
3cxr_A	291	Crystal Structure Of Gluconate 5-Dehydrogase From S		2e-12
2b4q_A	276	Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex		4e-12
2c07_A	285	Oxoacyl-Acp Reductase Of Plasmodium Falciparum Leng		8e-12
4g81_D	255	Crystal Structure Of A Hexonate Dehydrogenase Ortho		1e-11
3tn7_A	257	Crystal Structure Of Short-Chain Alcohol Dehydrogen		2e-11
3l77_A	235	X-Ray Structure Alcohol Dehydrogenase From Archaeon		2e-11
4e3z_A	272	Crystal Structure Of A Oxidoreductase From Rhizobiu		2e-11
3n74_A	261	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		3e-11
3ak4_A	263	Crystal Structure Of Nadh-Dependent Quinuclidinone		4e-11
1edo_A	244	The X-Ray Structure Of Beta-Keto Acyl Carrier Prote		5e-11
1spx_A	278	Crystal Structure Of Glucose Dehydrogenase Of Caeno		5e-11
3grp_A	266	2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl-		8e-11
2cfc_A	250	Structural Basis For Stereo Selectivity In The (R)-		9e-11
2jap_A	247	Clavulanic Acid Dehydrogenase: Structural And Bioch		1e-10
3gvc_A	277	Crystal Structure Of Probable Short-Chain Dehydroge		1e-10
2zat_A	260	Crystal Structure Of A Mammalian Reductase Length =		1e-10
3v2g_A	271	Crystal Structure Of A DehydrogenaseREDUCTASE FROM		1e-10
1xhl_A	297	Crystal Structure Of Putative Tropinone Reductase-I		2e-10
3nug_A	247	Crystal Structure Of Wild Type Tetrameric Pyridoxal		2e-10
2pd6_A	264	Structure Of Human Hydroxysteroid Dehydrogenase Typ		2e-10
1ipe_A	259	Tropinone Reductase-Ii Complexed With Nadph Length		3e-10
2ae2_A	260	Tropinone Reductase-Ii Complexed With Nadp+ And Pse		3e-10
3ndr_A	247	Crystal Structure Of Tetrameric Pyridoxal 4-Dehydro		3e-10
3awd_A	260	Crystal Structure Of Gox2181 Length = 260		3e-10
3enn_A	249	2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN		4e-10
1wmb_A	260	Crystal Structure Of Nad Dependent D-3-Hydroxybutyl		4e-10
2ph3_A	245	Crystal Structure Of 3-oxoacyl-[acyl Carrier Protei		4e-10
3emk_A	246	2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN		5e-10
2nwq_A	272	Short Chain Dehydrogenase From Pseudomonas Aerugino		5e-10
2ew8_A	249	Crystal Structure Of The (s)-specific 1-phenylethan		6e-10
3ucx_A	264	The Structure Of A Short Chain Dehydrogenase From M		6e-10
2jah_A	247	Biochemical And Structural Analysis Of The Clavulan		7e-10
1xkq_A	280	Crystal Structure Of Short-Chain DehydrogenaseREDUC		9e-10
3o4r_A	261	Crystal Structure Of Human DehydrogenaseREDUCTASE (		1e-09
2ztm_A	260	T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase L		1e-09
3u0b_A	454	Crystal Structure Of An Oxidoreductase From Mycobac		1e-09
2bel_A	283	Structure Of Human 11-Beta-Hydroxysteroid Dehydroge		1e-09
3ch6_A	286	Crystal Structure Of 11beta-Hsd1 Double Mutant (L26		1e-09
2ilt_A	275	Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) W		1e-09
2ztu_A	260	T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase C		2e-09
2irw_A	264	Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) W		2e-09
1xu7_A	286	Crystal Structure Of The Interface Open Conformatio		2e-09
4hfr_A	272	Human 11beta-Hydroxysteroid Dehydrogenase Type 1 In		2e-09
2rbe_A	275	The Discovery Of 2-Anilinothiazolones As 11beta-Hsd		2e-09
3pdj_A	273	Crystal Structure Of Human 11-Beta-Hydroxysteroid D		2e-09
4bb6_A	292	Free-Wilson And Structural Approaches To Co-Optimis		2e-09
3d5q_A	272	Crystal Structure Of 11b-Hsd1 In Complex With Triaz		2e-09
4bb5_A	292	Free-Wilson And Structural Approaches To Co-Optimis		2e-09
3ctm_A	279	Crystal Structure Of A Carbonyl Reductase From Cand		3e-09
1nxq_A	251	Crystal Structure Of R-Alcohol Dehydrogenase (Radh)		3e-09
4eso_A	255	Crystal Structure Of A Putative Oxidoreductase Prot		3e-09
3vc7_A	254	Crystal Structure Of A Putative Oxidoreductase From		3e-09
3ezl_A	256	Crystal Structure Of Acetyacetyl-Coa Reductase From		3e-09
4dml_A	269	3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Syn		3e-09
3sju_A	279	Hedamycin Polyketide Ketoreductase Bound To Nadph L		4e-09
1zjy_A	251	Structure Of R-Specific Alcohol Dehydrogenase (Muta		5e-09
3kvo_A	346	Crystal Structure Of The Catalytic Domain Of Human		6e-09
3v2h_A	281	The Crystal Structure Of D-Beta-Hydroxybutyrate Deh		6e-09
2gdz_A	267	Crystal Structure Of 15-Hydroxyprostaglandin Dehydr		6e-09
1xg5_A	279	Structure Of Human Putative Dehydrogenase Mgc4172 I		7e-09
1yo6_A	250	Crystal Structure Of The Putative Carbonyl Reductas		8e-09
3lf1_A	265	Apo Structure Of The Short Chain Oxidoreductase Q9h		8e-09
3lls_A	475	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		8e-09
3v1t_C	462	Crystal Structure Of A Putative Ketoacyl Reductase		8e-09
3q6i_A	446	Crystal Structure Of Fabg4 And Coenzyme Binary Comp		9e-09
4fw8_A	454	Crystal Structure Of Fabg4 Complexed With Coenzyme		1e-08
3icc_A	255	Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Car		1e-08
3m1l_A	432	Crystal Strucutre Of A C-Terminal Trunacted Mutant		1e-08
3tfo_A	264	Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Car		1e-08
3m1a_A	281	The Crystal Structure Of A Short-Chain Dehydrogenas		1e-08
2q2q_A	255	Structure Of D-3-Hydroxybutyrate Dehydrogenase From		2e-08
3ay6_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		2e-08
3aus_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		2e-08
3gk3_A	269	Crystal Structure Of Acetoacetyl-Coa Reductase From		2e-08
3ay7_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		2e-08
1uzl_A	247	Maba From Mycobacterium Tuberculosis Length = 247		2e-08
3rku_A	287	Substrate Fingerprint And The Structure Of Nadp+ De		3e-08
2ntn_A	267	Crystal Structure Of Maba-c60v/g139a/s144l Length =		3e-08
1uzm_A	247	Maba From Mycobacterium Tuberculosis Length = 247		4e-08
2dtd_A	264	Structure Of Thermoplasma Acidophilum Aldohexose De		5e-08
2zk7_A	257	Structure Of A C-Terminal Deletion Mutant Of Thermo		5e-08
4b79_A	242	The Aeropath Project And Pseudomonas Aeruginosa Hig		6e-08
2nm0_A	253	Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl		8e-08
2ehd_A	234	Crystal Structure Analysis Of Oxidoreductase Length		9e-08
4iqg_C	271	Crystal Structure Of Bpro0239 Oxidoreductase From P		1e-07
1xse_A	295	Crystal Structure Of Guinea Pig 11beta-Hydroxystero		1e-07
4dyv_A	272	Crystal Structure Of A Short-Chain DehydrogenaseRED		1e-07
3dwf_A	276	Crystal Structure Of The Guinea Pig 11beta-Hydroxys		1e-07
3g49_A	277	N-(Pyridin-2-Yl) Arylsulfonamide Inhibitors Of 11b-		2e-07
4fn4_A	254	Short-chain Nad(h)-dependent Dehydrogenase/reductas		2e-07
4hp8_A	247	Crystal Structure Of A Putative 2-Deoxy-D-Gluconate		2e-07
3lz6_A	263	Guinea Pig 11beta Hydroxysteroid Dehydrogenase With		2e-07
1y5m_A	276	The Crystal Structure Of Murine 11b-Hydroxysteroid		2e-07
3g1t_A	258	Crystal Structure Of Short Chain Dehydrogenase From		2e-07
1yxm_A	303	Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa		3e-07
3gmd_A	264	Structure-Based Design Of 7-Azaindole-Pyrrolidines		3e-07
3oec_A	317	Crystal Structure Of Carveol Dehydrogenase From Myc		3e-07
4da9_A	280	Crystal Structure Of Putative Short-Chain Dehydroge		4e-07
2bd0_A	244	Chlorobium Tepidum Sepiapterin Reductase Complexed		7e-07
4egf_A	266	Crystal Structure Of A L-Xylulose Reductase From My		8e-07
3a28_C	258	Crystal Structure Of L-2,3-Butanediol Dehydrogenase		9e-07
1xq1_A	266	X-Ray Structure Of Putative Tropinone Reducatse Fro		9e-07
3p19_A	266	Improved Nadph-Dependent Blue Fluorescent Protein L		1e-06
1g6k_A	261	Crystal Structure Of Glucose Dehydrogenase Mutant E		1e-06
4e6p_A	259	Crystal Structure Of A Probable Sorbitol Dehydrogen		1e-06
4iin_A	271	Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Car		1e-06
1zem_A	262	Crystal Structure Of Nad+-Bound Xylitol Dehydrogena		1e-06
2hsd_A	253	The Refined Three-Dimensional Structure Of 3alpha,2		1e-06
1hdc_A	254	Mechanism Of Inhibition Of 3alpha,20beta-Hydroxyste		1e-06
1uls_A	245	Crystal Structure Of Tt0140 From Thermus Thermophil		1e-06
1rwb_A	261	Cooperative Effect Of Two Surface Amino Acid Mutati		1e-06
4ibo_A	271	Crystal Structure Of A Putative Gluconate Dehydroge		2e-06
1gco_A	261	Crystal Structure Of Glucose Dehydrogenase Complexe		2e-06
3qiv_A	253	Crystal Structure Of A Putative Short-Chain Dehydro		2e-06
1gee_A	261	Crystal Structure Of Glucose Dehydrogenase Mutant Q		2e-06
3vtz_A	269	Structure Of Thermoplasma Volcanium Aldohexose Dehy		2e-06
3rih_A	293	Crystal Structure Of A Putative Short Chain Dehydro		2e-06
3pgx_A	280	Crystal Structure Of A Putative Carveol Dehydrogena		3e-06
3f1l_A	252	The 0.95 A Structure Of An Oxidoreductase, Ycik Fro		3e-06
4dqx_A	277	Crystal Structure Of A Short Chain Dehydrogenase Fr		3e-06
3oic_A	258	Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl		3e-06
3f5q_A	262	Crystal Structure Of Putative Short Chain Dehydroge		4e-06
3f5s_A	255	Crystal Structure Of Putatitve Short Chain Dehydrog		6e-06
3r1i_A	276	Crystal Structure Of A Short-Chain Type Dehydrogena		8e-06
3s55_A	281	Crystal Structure Of A Putative Short-Chain Dehydro		9e-06
1k2w_A	256	Crystal Structure Of Sorbitol Dehydrogenase From R.		1e-05
4dry_A	281	The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr		2e-05
3gdf_A	267	Crystal Structure Of The Nadp-Dependent Mannitol De		2e-05
3f9i_A	249	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		2e-05
3tox_A	280	Crystal Structure Of A Short Chain Dehydrogenase In		2e-05
1nff_A	260	Crystal Structure Of Rv2002 Gene Product From Mycob		3e-05
1yde_A	270	Crystal Structure Of Human Retinal Short-Chain Dehy		4e-05
3is3_A	270	Crystal Structure Of 17beta-Hydroxysteroid Dehydrog		5e-05
1iol_A	327	Estrogenic 17-beta Hydroxysteroid Dehydrogenase Com		5e-05
1sny_A	267	Carbonyl Reductase Sniffer Of D. Melanogaster Lengt		6e-05
3tzq_B	271	Crystal Structure Of A Short-Chain Type Dehydrogena		7e-05
1x1e_A	239	Crystal Structure Of Tt0495 Protein From Thermus Th		7e-05
1fdw_A	327	Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 M		7e-05
2et6_A	604	(3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candid		7e-05
1fds_A	327	Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 C		8e-05
3r3s_A	294	Structure Of The Ygha Oxidoreductase From Salmonell		8e-05
1equ_A	327	Type 1 17-Beta Hydroxysteroid Dehydrogenase Equilin		8e-05
1fdu_A	327	Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 M		8e-05
2dkn_A	255	Crystal Structure Of The 3-alpha-hydroxysteroid Deh		8e-05
3nyw_A	250	Crystal Structure Of A Betaketoacyl-[acp] Reductase		8e-05
4fgs_A	273	Crystal Structure Of A Probable Dehydrogenase Prote		8e-05
1ahi_A	255	7 Alpha-Hydroxysteroid Dehydrogenase Complexed With		9e-05
1a27_A	289	Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 C		9e-05
4fc6_A	277	Studies On Dcr Shed New Light On Peroxisomal Beta-O		1e-04
3qlj_A	322	Crystal Structure Of A Short Chain Dehydrogenase Fr		1e-04
1e3s_A	261	Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co		1e-04
3itd_A	270	Crystal Structure Of An Inactive 17beta-Hydroxyster		1e-04
1e3w_A	261	Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co		2e-04
1e6w_A	260	Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co		2e-04
3pk0_A	262	Crystal Structure Of Short-Chain DehydrogenaseREDUC		2e-04
1yb1_A	272	Crystal Structure Of Human 17-Beta-Hydroxysteroid D		2e-04
1hxh_A	253	Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID D		2e-04
1doh_A	283	Structure Of Trihydroxynaphthalene Reductase In Com		3e-04
3ged_A	247	Fingerprint And Structural Analysis Of A Apo Scor E		3e-04
2wdz_A	254	Crystal Structure Of The Short Chain Dehydrogenase		3e-04
3i4f_A	264	Structure Of Putative 3-oxoacyl-reductase From Baci		3e-04
1ybv_A	283	Structure Of Trihydroxynaphthalene Reductase In Com		3e-04
3ioy_A	319	Structure Of Putative Short-Chain Dehydrogenase (Sa		3e-04
1iy8_A	267	Crystal Structure Of Levodione Reductase Length = 2		4e-04
3tl3_A	257	Structure Of A Short-Chain Type DehydrogenaseREDUCT		5e-04
2o23_A	265	The Structure Of Wild-Type Human Hadh2 (17beta-Hydr		7e-04
2qq5_A	260	Crystal Structure Of Human Sdr Family Member 1 Leng		8e-04
3un1_A	260	Crystal Structure Of An Oxidoreductase From Sinorhi		8e-04
1so8_A	261	Abeta-bound Human Abad Structure [also Known As 3-h		8e-04
3f1k_A	252	Crystal Structure Of Ycik From E. Coli, An Oxidored		8e-04
1u7t_A	261	Crystal Structure Of AbadHSD10 WITH A BOUND INHIBIT		8e-04
3gaf_A	256	2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid De		9e-04

>pdb|3O26|A Chain A, The Structure Of Salutaridine Reductase From Papaver Somniferum Length = 311

Iteration: 1
 Score =  163 bits (412), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 106/298 (35%), Positives = 150/298 (50%), Gaps = 38/298 (12%)
Query: 28  SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLP-VNFFQL 86
           +K   A+VTG NKGIGF + K+L+  G+ V+LT RDV +G  AVE L       V F QL
Sbjct: 10  TKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQL 69
Query: 87  DVSDP-SSIEAFVSWFKSNFAALDILVNNAGVS------------FNDIYKN-------- 125
           DV+DP +++ +   + K++F  LDILVNNAGV+             +DI ++        
Sbjct: 70  DVTDPIATMSSLADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIY 129
Query: 126 -----------TVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKV 174
                      T E AE  ++ N+ G K +TE L+PL + S S  RI+N+SS  G+L  V
Sbjct: 130 EKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQLSDS-PRIVNVSSSTGSLKYV 188
Query: 175 RNPN-IKXXXXXXXXXXXXXXRFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTM 233
            N   ++                V + L+  K+   ++ GWP     Y  SK  LNAYT 
Sbjct: 189 SNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAYTR 248
Query: 234 VLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTADEAADVGARLLLLHPQQLPTAKFY 291
           VLA +       VN  CPG  +T M  G G++TA+E A+   R+ L  P   P+  FY
Sbjct: 249 VLANKI--PKFQVNCVCPGLVKTEMNYGIGNYTAEEGAEHVVRIALF-PDDGPSGFFY 303

>pdb|1WMA|A Chain A, Crystal Structure Of Human Cbr1 In Complex With Hydroxy-pp Length = 276

Iteration: 1
 Score =  149 bits (377), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 89/268 (33%), Positives = 146/268 (54%), Gaps = 15/268 (5%)
Query: 32  IAIVTGANKGIGFALVKRLAEL-GLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSD 90
           +A+VTG NKGIG A+V+ L  L    V+LTARDV RGQ AV+ L  +GL   F QLD+ D
Sbjct: 6   VALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDD 65
Query: 91  PSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEH--AETVIRTNFYGAKLLTESL 148
             SI A   + +  +  LD+LVNNAG++F  +   T  H  AE  ++TNF+G + +   L
Sbjct: 66  LQSIRALRDFLRKEYGGLDVLVNNAGIAFK-VADPTPFHIQAEVTMKTNFFGTRDVCTEL 124
Query: 149 LPLFRRSPSKSRILNISSRLGTLS-KVRNPNIKXXXXXXXXXXXXXXRFVGLFLQSVKDG 207
           LPL +    + R++N+SS +   + K  +P ++                +  F++  K G
Sbjct: 125 LPLIK---PQGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKG 181
Query: 208 TWKSQGWPEIWTDYAVSKLALNAYTMV----LAKRYEGEGISVNSYCPGFTQTSMTQGQG 263
             + +GWP   + Y V+K+ +   + +    L+++ +G+ I +N+ CPG+ +T M   + 
Sbjct: 182 VHQKEGWPS--SAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPKA 239
Query: 264 SHTADEAADVGARLLLLHPQ-QLPTAKF 290
           + + +E A+    L LL P  + P  +F
Sbjct: 240 TKSPEEGAETPVYLALLPPDAEGPHGQF 267

>pdb|2PFG|A Chain A, Crystal Structure Of Human Cbr1 In Complex With Bigf2 Length = 276

Iteration: 1
 Score =  149 bits (376), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 89/268 (33%), Positives = 146/268 (54%), Gaps = 15/268 (5%)
Query: 32  IAIVTGANKGIGFALVKRLAEL-GLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSD 90
           +A+VTG NKGIG A+V+ L  L    V+LTARDV RGQ AV+ L  +GL   F QLD+ D
Sbjct: 6   VALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDD 65
Query: 91  PSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEH--AETVIRTNFYGAKLLTESL 148
             SI A   + +  +  LD+LVNNAG++F  +   T  H  AE  ++TNF+G + +   L
Sbjct: 66  LQSIRALRDFLRKEYGGLDVLVNNAGIAFK-VADPTPFHIQAEVTMKTNFFGTRDVXTEL 124
Query: 149 LPLFRRSPSKSRILNISSRLGTLS-KVRNPNIKXXXXXXXXXXXXXXRFVGLFLQSVKDG 207
           LPL +    + R++N+SS +   + K  +P ++                +  F++  K G
Sbjct: 125 LPLIK---PQGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKG 181
Query: 208 TWKSQGWPEIWTDYAVSKLALNAYTMV----LAKRYEGEGISVNSYCPGFTQTSMTQGQG 263
             + +GWP   + Y V+K+ +   + +    L+++ +G+ I +N+ CPG+ +T M   + 
Sbjct: 182 VHQKEGWPS--SAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPKA 239
Query: 264 SHTADEAADVGARLLLLHPQ-QLPTAKF 290
           + + +E A+    L LL P  + P  +F
Sbjct: 240 TKSPEEGAETPVYLALLPPDAEGPHGQF 267

>pdb|1N5D|A Chain A, Crystal Structure Of Porcine Testicular Carbonyl Reductase 20beta-Hydroxysteroid Dehydrogenase Length = 288

Iteration: 1
 Score =  140 bits (352), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 86/256 (33%), Positives = 139/256 (54%), Gaps = 18/256 (7%)
Query: 28  SKETIAIVTGANKGIGFALVKRLA-ELGLTVILTARDVERGQRAVESLSEKGLPVNFFQL 86
           S   +A+VTGANKGIGFA+V+ L  +    V+LTARDV RGQ AV+ L  +GL   F QL
Sbjct: 2   SNTRVALVTGANKGIGFAIVRDLCRQFAGDVVLTARDVARGQAAVKQLQAEGLSPRFHQL 61
Query: 87  DVSDPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEH--AETVIRTNFYGAKLL 144
           D+ D  SI A   + +  +  LD+LVNNA ++F  +   T  H  AE  ++TNF G + +
Sbjct: 62  DIIDLQSIRALCDFLRKEYGGLDVLVNNAAIAFQ-LDNPTPFHIQAELTMKTNFMGTRNV 120
Query: 145 TESLLPLFRRSPSKSRILNISSRLGTLS-KVRNPNIKXXXXXXXXXXXXXXRFVGLFLQS 203
              LLPL +    + R++N+SS  G  +    +P ++                +  F++ 
Sbjct: 121 CTELLPLIK---PQGRVVNVSSTEGVRALNECSPELQQKFKSETITEEELVGLMNKFVED 177
Query: 204 VKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYE----GEGISVNSYCPGFTQTSMT 259
            K+G  + +GW +  + Y V+K+ ++  + + A++      G+ I +N+ CPG+ +T M 
Sbjct: 178 TKNGVHRKEGWSD--STYGVTKIGVSVLSRIYARKLREQRAGDKILLNACCPGWVRTDM- 234
Query: 260 QGQGSHTADEAADVGA 275
              G   A ++ +VGA
Sbjct: 235 ---GGPKAPKSPEVGA 247

>pdb|2HRB|A Chain A, Crystal Structure Of Human Carbonyl Reductase 3, Complexed With Nadp+ Length = 274

Iteration: 1
 Score =  138 bits (348), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 87/260 (33%), Positives = 135/260 (51%), Gaps = 16/260 (6%)
Query: 32  IAIVTGANKGIGFALVKRLA-ELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSD 90
           +A+VTGAN+GIG A+ + L  +    V+LTARDV RGQ AV+ L  +GL   F QLD+ D
Sbjct: 4   VALVTGANRGIGLAIARELCRQFSGDVVLTARDVARGQAAVQQLQAEGLSPRFHQLDIDD 63
Query: 91  PSSIEAFVSWFKSNFAALDILVNNAGVSF--NDIYKNTVEHAETVIRTNFYGAKLLTESL 148
             SI A   + +  +  L++LVNNA V+F  +D     ++ AE  ++TNF+  + +   L
Sbjct: 64  LQSIRALRDFLRKEYGGLNVLVNNAAVAFKSDDPMPFDIK-AEMTLKTNFFATRNMCNEL 122
Query: 149 LPLFRRSPSKSRILNISSRLGTLSKVRN--PNIKXXXXXXXXXXXXXXRFVGLFLQSVKD 206
           LP+ +      R++NISS L  L    N   +++                +  F++  K+
Sbjct: 123 LPIMK---PHGRVVNISS-LQCLRAFENCSEDLQERFHSETLTEGDLVDLMKKFVEDTKN 178
Query: 207 GTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYE----GEGISVNSYCPGFTQTSMTQGQ 262
              + +GWP   + Y VSKL +   + +LA+R +     + I VN+ CPG  +T M    
Sbjct: 179 EVHEREGWPN--SPYGVSKLGVTVLSRILARRLDEKRKADRILVNACCPGPVKTDMDGKD 236
Query: 263 GSHTADEAADVGARLLLLHP 282
              T +E A+    L LL P
Sbjct: 237 SIRTVEEGAETPVYLALLPP 256

>pdb|1VL8|A Chain A, Crystal Structure Of Gluconate 5-dehydrogenase (tm0441) From Thermotoga Maritima At 2.07 A Resolution Length = 267

Iteration: 1
 Score = 87.0 bits (214), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 65/231 (28%), Positives = 105/231 (45%), Gaps = 44/231 (19%)
Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEK-GLPVNFFQLDVSD 90
           +A+VTG ++G+GF + + LAE G +V++ +R++E    A + L+EK G+    F+ DVS+
Sbjct: 23  VALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSN 82
Query: 91  PSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKN-TVEHAETVIRTNFYGAKLLTESLL 149
              ++  +   K  F  LD +VN AG++     +   ++    VI  N +G   +     
Sbjct: 83  YEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAF 142
Query: 150 PLFRRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFLQSVKDGTW 209
            L R S + S I+NI S   T+ +V  PNI                              
Sbjct: 143 SLLRESDNPS-IINIGSL--TVEEVTMPNI------------------------------ 169
Query: 210 KSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ 260
                    + YA SK  + + T  LAK +   GI VN   PG+ +T MT+
Sbjct: 170 ---------SAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTE 211

>pdb|3RSH|A Chain A, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase (Fabg) From Vibrio Cholerae O1 Complexed With Nadp+ (Space Group P62) Length = 251

Iteration: 1
 Score = 84.7 bits (208), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 62/230 (26%), Positives = 102/230 (44%), Gaps = 47/230 (20%)
Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           +A+VTGA++GIG A+ + LAE G  VI TA      Q   + L + G       L+V++P
Sbjct: 14  VALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNG---KGMALNVTNP 70
Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHA-ETVIRTNFYGAKLLTESLLP 150
            SIEA +      F  +DILVNNAG++ +++     E     ++ TN      L++++L 
Sbjct: 71  ESIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLR 130
Query: 151 LFRRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFLQSVKDGTWK 210
              +   + RI+N+ S +GT+      N                                
Sbjct: 131 GMMK-KRQGRIINVGSVVGTMGNAGQAN-------------------------------- 157
Query: 211 SQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ 260
                     YA +K  +  +T  +A+     G++VN+  PGF +T MT+
Sbjct: 158 ----------YAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTK 197

>pdb|3TZC|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(Y155f) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 82.8 bits (203), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/230 (26%), Positives = 102/230 (44%), Gaps = 47/230 (20%)
Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           +A+VTGA++GIG A+ + LAE G  VI TA      Q   + L + G       L+V++P
Sbjct: 14  VALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNG---KGMALNVTNP 70
Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHA-ETVIRTNFYGAKLLTESLLP 150
            SIEA +      F  +DILVNNAG++ +++     E     ++ TN      L++++L 
Sbjct: 71  ESIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLR 130
Query: 151 LFRRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFLQSVKDGTWK 210
              +   + RI+N+ S +GT+      N                                
Sbjct: 131 GMMK-KRQGRIINVGSVVGTMGNAGQAN-------------------------------- 157
Query: 211 SQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ 260
                     +A +K  +  +T  +A+     G++VN+  PGF +T MT+
Sbjct: 158 ----------FAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTK 197

>pdb|3TZK|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 82.0 bits (201), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 61/230 (26%), Positives = 101/230 (43%), Gaps = 47/230 (20%)
Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           +A+VTGA++GIG A+ + LAE G  VI TA      Q   + L + G       L+V++P
Sbjct: 14  VALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNG---KGMALNVTNP 70
Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHA-ETVIRTNFYGAKLLTESLLP 150
            SIEA +      F  +DILVNNA ++ +++     E     ++ TN      L++++L 
Sbjct: 71  ESIEAVLKAITDEFGGVDILVNNAAITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLR 130
Query: 151 LFRRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFLQSVKDGTWK 210
              +   + RI+N+ S +GT+      N                                
Sbjct: 131 GMMK-KRQGRIINVGSVVGTMGNAGQAN-------------------------------- 157
Query: 211 SQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ 260
                     YA +K  +  +T  +A+     G++VN+  PGF +T MT+
Sbjct: 158 ----------YAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTK 197

>pdb|1I01|A Chain A, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein] Reductase From E. Coli. Length = 244

Iteration: 1
 Score = 81.6 bits (200), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 67/233 (28%), Positives = 106/233 (45%), Gaps = 53/233 (22%)
Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVE---SLSEKGLPVNFFQLDV 88
           IA+VTGA++GIG A+ + LA  G  VI TA   E G +A+      + KGL      L+V
Sbjct: 7   IALVTGASRGIGRAIAETLAARGAKVIGTATS-ENGAQAISDYLGANGKGL-----MLNV 60
Query: 89  SDPSSIEAFVSWFKSNFAALDILVNNAGVSFND-IYKNTVEHAETVIRTNFYGAKLLTES 147
           +DP+SIE+ +   ++ F  +DILVNNAG++ ++ + +   E    +I TN      L+++
Sbjct: 61  TDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKA 120
Query: 148 LLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFLQSVKDG 207
           ++    +     RI+ I S +GT+      N                             
Sbjct: 121 VMRAMMK-KRHGRIITIGSVVGTMGNGGQAN----------------------------- 150
Query: 208 TWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ 260
                        YA +K  L  ++  LA+     GI+VN   PGF +T MT+
Sbjct: 151 -------------YAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTR 190

>pdb|3U09|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92d) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 81.6 bits (200), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 61/230 (26%), Positives = 101/230 (43%), Gaps = 47/230 (20%)
Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           +A+VTGA++GIG A+ + LAE G  VI TA      Q   + L + G       L+V++P
Sbjct: 14  VALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNG---KGMALNVTNP 70
Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHA-ETVIRTNFYGAKLLTESLLP 150
            SIEA +      F  +DILVNNA ++ +++     E     ++ TN      L++++L 
Sbjct: 71  ESIEAVLKAITDEFGGVDILVNNADITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLR 130
Query: 151 LFRRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFLQSVKDGTWK 210
              +   + RI+N+ S +GT+      N                                
Sbjct: 131 GMMK-KRQGRIINVGSVVGTMGNAGQAN-------------------------------- 157
Query: 211 SQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ 260
                     YA +K  +  +T  +A+     G++VN+  PGF +T MT+
Sbjct: 158 ----------YAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTK 197

>pdb|3FTP|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Burkholderia Pseudomallei At 2.05 A Resolution Length = 270

Iteration: 1
 Score = 81.3 bits (199), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 67/233 (28%), Positives = 103/233 (44%), Gaps = 48/233 (20%)
Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAV-ESLSEKGLPVNFFQLDVSD 90
           +AIVTGA++GIG A+   LA  G  VI TA   E G   +  +  + GL      L+V+D
Sbjct: 30  VAIVTGASRGIGRAIALELARRGAMVIGTA-TTEAGAEGIGAAFKQAGLEGRGAVLNVND 88
Query: 91  PSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHA-ETVIRTNFYGAKLLTESLL 149
            ++++A V      F AL++LVNNAG++ + +     +   + VI TN      L+ ++L
Sbjct: 89  ATAVDALVESTLKEFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVL 148
Query: 150 -PLFRRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFLQSVKDGT 208
            P+ +      RI+NI+S +G+     NP                               
Sbjct: 149 RPMMK--ARGGRIVNITSVVGSAG---NPG------------------------------ 173
Query: 209 WKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG 261
                      +YA +K  +   T  LA+     GI+VN   PGF  T MT+G
Sbjct: 174 ---------QVNYAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKG 217

>pdb|3TZH|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(F187a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 81.3 bits (199), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 61/230 (26%), Positives = 101/230 (43%), Gaps = 47/230 (20%)
Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           +A+VTGA++GIG A+ + LAE G  VI TA      Q   + L + G       L+V++P
Sbjct: 14  VALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNG---KGMALNVTNP 70
Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHA-ETVIRTNFYGAKLLTESLLP 150
            SIEA +      F  +DILVNNAG++ +++     E     ++ TN      L++++L 
Sbjct: 71  ESIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLR 130
Query: 151 LFRRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFLQSVKDGTWK 210
              +   + RI+N+ S +GT+      N                                
Sbjct: 131 GMMK-KRQGRIINVGSVVGTMGNAGQAN-------------------------------- 157
Query: 211 SQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ 260
                     YA +K  +  +T  +A+     G++VN+  PG  +T MT+
Sbjct: 158 ----------YAAAKAGVIGFTKSMAREVASRGVTVNTVAPGAIETDMTK 197

>pdb|1Q7C|A Chain A, The Structure Of Betaketoacyl-[acp] Reductase Y151f Mutant In Complex With Nadph Fragment Length = 244

Iteration: 1
 Score = 79.7 bits (195), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 66/233 (28%), Positives = 106/233 (45%), Gaps = 53/233 (22%)
Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVE---SLSEKGLPVNFFQLDV 88
           IA+VTGA++GIG A+ + LA  G  VI TA   E G +A+      + KGL      L+V
Sbjct: 7   IALVTGASRGIGRAIAETLAARGAKVIGTATS-ENGAQAISDYLGANGKGL-----MLNV 60
Query: 89  SDPSSIEAFVSWFKSNFAALDILVNNAGVSFND-IYKNTVEHAETVIRTNFYGAKLLTES 147
           +DP+SIE+ +   ++ F  +DILVNNAG++ ++ + +   E    +I TN      L+++
Sbjct: 61  TDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKA 120
Query: 148 LLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFLQSVKDG 207
           ++    +     RI+ I S +GT+      N                             
Sbjct: 121 VMRAMMK-KRHGRIITIGSVVGTMGNGGQAN----------------------------- 150
Query: 208 TWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ 260
                        +A +K  L  ++  LA+     GI+VN   PGF +T MT+
Sbjct: 151 -------------FAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTR 190

>pdb|3SJ7|A Chain A, Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) From Staphylococcus Aureus Complex With Nadph Length = 252

Iteration: 1
 Score = 78.6 bits (192), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 99/229 (43%), Gaps = 45/229 (19%)
Query: 33  AIVTGANKGIGFALVKRLAELGLTVILT-ARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           A+VTGA++GIG ++  +LAE G  V +  A   E+ +  VE +  KG+     Q +V+D 
Sbjct: 13  ALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADA 72
Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHA-ETVIRTNFYGAKLLTESLLP 150
             ++A +    S F +LD+LVNNAG++ +++     E   + VI TN  G     +   P
Sbjct: 73  DEVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATP 132
Query: 151 LFRRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFLQSVKDGTWK 210
              R  S + I+N+SS +G    V NP                                 
Sbjct: 133 QMLRQRSGA-IINLSSVVGA---VGNPG-------------------------------- 156
Query: 211 SQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMT 259
                    +Y  +K  +   T   A+     GI+VN+  PGF  + MT
Sbjct: 157 -------QANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMT 198

>pdb|3OP4|A Chain A, Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Vibrio Cholerae O1 Biovar Eltor Str. N16961 In Complex With Nadp+ Length = 248

Iteration: 1
 Score = 76.6 bits (187), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 61/230 (26%), Positives = 98/230 (42%), Gaps = 47/230 (20%)
Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           +A+VTGA++GIG A+ + LAE G  VI TA      Q   + L + G       L+V++P
Sbjct: 11  VALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNG---KGXALNVTNP 67
Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHA-ETVIRTNFYGAKLLTESLLP 150
            SIEA +      F  +DILVNNAG++ +++     E     +  TN      L++++L 
Sbjct: 68  ESIEAVLKAITDEFGGVDILVNNAGITRDNLLXRXKEEEWSDIXETNLTSIFRLSKAVLR 127
Query: 151 LFRRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFLQSVKDGTWK 210
              +   + RI+N+ S +GT       N                                
Sbjct: 128 GXXK-KRQGRIINVGSVVGTXGNAGQAN-------------------------------- 154
Query: 211 SQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ 260
                     YA +K  +  +T   A+     G++VN+  PGF +T  T+
Sbjct: 155 ----------YAAAKAGVIGFTKSXAREVASRGVTVNTVAPGFIETDXTK 194

>pdb|3RD5|A Chain A, Crystal Structure Of A Putative Uncharacterized Protein From Mycobacterium Paratuberculosis Length = 291

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 73/271 (26%), Positives = 113/271 (41%), Gaps = 56/271 (20%)
Query: 34  IVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSS 93
           ++TGAN G+G    + LA  G TVI+  RD  +G+ A  +++ +   V   +LD+ D SS
Sbjct: 20  VITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQ---VEVRELDLQDLSS 76
Query: 94  IEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFR 153
           +  F        +  D+L+NNAG+     Y  TV+  E+ I TN  G   LT  LLP   
Sbjct: 77  VRRFA----DGVSGADVLINNAGI-MAVPYALTVDGFESQIGTNHLGHFALTNLLLPRL- 130
Query: 154 RSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFLQSVKDGTWKSQG 213
                 R++ +SS      ++                            +++D  W+S+ 
Sbjct: 131 ----TDRVVTVSSMAHWPGRI----------------------------NLEDLNWRSRR 158
Query: 214 WPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYC--PGFTQTSMTQGQGSHTADE-- 269
           +   W  Y+ SKLA   +T  L +R    G  + +    PG++ T++    G    D   
Sbjct: 159 YSP-WLAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASGRKLGDALM 217
Query: 270 ---------AADVGAR-LLLLHPQQLPTAKF 290
                     AD GAR  L    Q LP   F
Sbjct: 218 SAATRVVATDADFGARQTLYAASQDLPGDSF 248

>pdb|3RKR|A Chain A, Crystal Structure Of A Metagenomic Short-Chain Oxidoreductase (Sdr) In Complex With Nadp Length = 262

Iteration: 1
 Score = 75.5 bits (184), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 54/149 (36%), Positives = 79/149 (53%), Gaps = 10/149 (6%)
Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVE-SLSEKGLPVNFFQLDVSD 90
           +A+VTGA++GIG A+ ++L  LG  V+LTARDVE+  RAVE  +   G        D+S 
Sbjct: 31  VAVVTGASRGIGAAIARKLGSLGARVVLTARDVEK-LRAVEREIVAAGGEAESHACDLSH 89
Query: 91  PSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAE--TVIRTNFYGAKLLTESL 148
             +I AF +   +     D+LVNNAGV +     +T++ AE   +I  N     LL  + 
Sbjct: 90  SDAIAAFATGVLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAF 149
Query: 149 LPLFRRSPSKSRILNISSRLGTLSKVRNP 177
            P    +  +  I+NISS  G     +NP
Sbjct: 150 APAM-IAAKRGHIINISSLAG-----KNP 172

>pdb|1W4Z|A Chain A, Structure Of Actinorhodin Polyketide (Actiii) Reductase Length = 281

Iteration: 1
 Score = 75.5 bits (184), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 67/244 (27%), Positives = 98/244 (40%), Gaps = 54/244 (22%)
Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           +A+VTGA  GIG  + +RL + GL V + AR  E  +  ++ L E G+  +    DV   
Sbjct: 28  VALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSV 87
Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAET----VIRTNFYGAKLLTES 147
             IEA V+     +  +D+LVNNAG         T E A+     V+ TN  G   +T+ 
Sbjct: 88  PEIEALVAAVVERYGPVDVLVNNAGRPGGG---ATAELADELWLDVVETNLTGVFRVTKQ 144
Query: 148 LLP---LFRRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFLQSV 204
           +L    +  R     RI+NI+S  G                                   
Sbjct: 145 VLKAGGMLER--GTGRIVNIASTGG----------------------------------- 167
Query: 205 KDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGS 264
           K G   +         Y+ SK  +  +T  L       GI+VN+ CPGF +T M      
Sbjct: 168 KQGVVHA-------APYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVRE 220
Query: 265 HTAD 268
           H +D
Sbjct: 221 HYSD 224

>pdb|2RH4|A Chain A, Actinorhodin Ketoreductase, Actkr, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 75.5 bits (184), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 67/244 (27%), Positives = 98/244 (40%), Gaps = 54/244 (22%)
Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           +A+VTGA  GIG  + +RL + GL V + AR  E  +  ++ L E G+  +    DV   
Sbjct: 24  VALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSV 83
Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAET----VIRTNFYGAKLLTES 147
             IEA V+     +  +D+LVNNAG         T E A+     V+ TN  G   +T+ 
Sbjct: 84  PEIEALVAAVVERYGPVDVLVNNAGRPGGG---ATAELADELWLDVVETNLTGVFRVTKQ 140
Query: 148 LLP---LFRRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFLQSV 204
           +L    +  R     RI+NI+S  G                                   
Sbjct: 141 VLKAGGMLER--GTGRIVNIASTGG----------------------------------- 163
Query: 205 KDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGS 264
           K G   +         Y+ SK  +  +T  L       GI+VN+ CPGF +T M      
Sbjct: 164 KQGVVHA-------APYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVRE 216
Query: 265 HTAD 268
           H +D
Sbjct: 217 HYSD 220

>pdb|4DBZ|A Chain A, Crystal Structure Of V151l Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 75.1 bits (183), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 67/244 (27%), Positives = 97/244 (39%), Gaps = 54/244 (22%)
Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           +A+VTGA  GIG  + +RL + GL V + AR  E  +  ++ L E G+  +    DV   
Sbjct: 28  VALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSV 87
Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAET----VIRTNFYGAKLLTES 147
             IEA V+     +  +D+LVNNAG         T E A+     V+ TN  G   +T+ 
Sbjct: 88  PEIEALVAAVVERYGPVDVLVNNAGRPGGG---ATAELADELWLDVVETNLTGVFRVTKQ 144
Query: 148 LLP---LFRRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFLQSV 204
           +L    +  R     RI+NI+S                                      
Sbjct: 145 VLKAGGMLER--GTGRIVNIAS-------------------------------------- 164
Query: 205 KDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGS 264
              T   QG       Y+ SK  +  +T  L       GI+VN+ CPGF +T M      
Sbjct: 165 ---TGGKQGLVH-AAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVRE 220
Query: 265 HTAD 268
           H +D
Sbjct: 221 HYSD 224

>pdb|1X7G|A Chain A, Actinorhodin Polyketide Ketoreductase, Act Kr, With Nadp Bound Length = 261

Iteration: 1
 Score = 75.1 bits (183), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 67/244 (27%), Positives = 98/244 (40%), Gaps = 54/244 (22%)
Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           +A+VTGA  GIG  + +RL + GL V + AR  E  +  ++ L E G+  +    DV   
Sbjct: 8   VALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSV 67
Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAET----VIRTNFYGAKLLTES 147
             IEA V+     +  +D+LVNNAG         T E A+     V+ TN  G   +T+ 
Sbjct: 68  PEIEALVAAVVERYGPVDVLVNNAGRPGGG---ATAELADELWLDVVETNLTGVFRVTKQ 124
Query: 148 LLP---LFRRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFLQSV 204
           +L    +  R     RI+NI+S  G                                   
Sbjct: 125 VLKAGGMLER--GTGRIVNIASTGG----------------------------------- 147
Query: 205 KDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGS 264
           K G   +         Y+ SK  +  +T  L       GI+VN+ CPGF +T M      
Sbjct: 148 KQGVVHA-------APYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVRE 200
Query: 265 HTAD 268
           H +D
Sbjct: 201 HYSD 204

>pdb|2HQ1|A Chain A, Crystal Structure Of Orf 1438 A Putative GlucoseRIBITOL Dehydrogenase From Clostridium Thermocellum Length = 247

Iteration: 1
 Score = 75.1 bits (183), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 60/234 (25%), Positives = 95/234 (40%), Gaps = 45/234 (19%)
Query: 29  KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRA-VESLSEKGLPVNFFQLD 87
           K   AIVTG+++G+G A+  +L  +G  ++L          A  E     G+ V   + D
Sbjct: 4   KGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGD 63
Query: 88  VSDPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHA-ETVIRTNFYGAKLLTE 146
           V +P  +E  V      F  +DILVNNAG++ + +     E   + V+ TN   A L T+
Sbjct: 64  VKNPEDVENMVKTAMDAFGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTK 123
Query: 147 SLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFLQSVKD 206
           ++  +  +  S  +I+NI+S  G +      N                            
Sbjct: 124 AVSKIMLKQKS-GKIINITSIAGIIGNAGQAN---------------------------- 154
Query: 207 GTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ 260
                         YA SK  L  +T  +AK +  +GI  N+  PG  +T MT 
Sbjct: 155 --------------YAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTD 194

>pdb|4DC1|A Chain A, Crystal Structure Of Y202f Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 75.1 bits (183), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 67/244 (27%), Positives = 98/244 (40%), Gaps = 54/244 (22%)
Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           +A+VTGA  GIG  + +RL + GL V + AR  E  +  ++ L E G+  +    DV   
Sbjct: 28  VALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSV 87
Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAET----VIRTNFYGAKLLTES 147
             IEA V+     +  +D+LVNNAG         T E A+     V+ TN  G   +T+ 
Sbjct: 88  PEIEALVAAVVERYGPVDVLVNNAGRPGGG---ATAELADELWLDVVETNLTGVFRVTKQ 144
Query: 148 LLP---LFRRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFLQSV 204
           +L    +  R     RI+NI+S  G                                   
Sbjct: 145 VLKAGGMLER--GTGRIVNIASTGG----------------------------------- 167
Query: 205 KDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGS 264
           K G   +         Y+ SK  +  +T  L       GI+VN+ CPGF +T M      
Sbjct: 168 KQGVVHA-------APYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVRE 220
Query: 265 HTAD 268
           H +D
Sbjct: 221 HFSD 224

>pdb|3LYL|A Chain A, Structure Of 3-Oxoacyl-Acylcarrier Protein Reductase, Fabg From Francisella Tularensis Length = 247

Iteration: 1
 Score = 74.7 bits (182), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 66/240 (27%), Positives = 98/240 (40%), Gaps = 62/240 (25%)
Query: 30  ETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVS 89
           E +A+VTGA++GIGF +   LA  G TV+ TA      ++   S  EKG       L++S
Sbjct: 5   EKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSXKEKGFKARGLVLNIS 64
Query: 90  DPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHA-ETVIRTNFYGAKLLTESL 148
           D  SI+ F +  K+   A+DILVNNAG++ +++     E   ++VI TN          L
Sbjct: 65  DIESIQNFFAEIKAENLAIDILVNNAGITRDNLXXRXSEDEWQSVINTN----------L 114
Query: 149 LPLFRRSPSK---------SRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGL 199
             +FR S             RI++I S +G+     NP                      
Sbjct: 115 SSIFRXSKECVRGXXKKRWGRIISIGSVVGSAG---NPG--------------------- 150
Query: 200 FLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMT 259
                              T+Y  +K  +  ++  LA       I+VN   PGF  T  T
Sbjct: 151 ------------------QTNYCAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDXT 192

>pdb|3CSD|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To Nadph And The Inhibitor Emodin Length = 281

Iteration: 1
 Score = 74.3 bits (181), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 67/244 (27%), Positives = 98/244 (40%), Gaps = 54/244 (22%)
Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           +A+VTGA  GIG  + +RL + GL V + AR  E  +  ++ L E G+  +    DV   
Sbjct: 28  VALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSV 87
Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAET----VIRTNFYGAKLLTES 147
             IEA V+     +  +D+LVNNAG         T E A+     V+ TN  G   +T+ 
Sbjct: 88  PEIEALVAAVVERYGPVDVLVNNAGRLGGG---ATAELADELWLDVVETNLTGVFRVTKQ 144
Query: 148 LLP---LFRRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFLQSV 204
           +L    +  R     RI+NI+S  G                                   
Sbjct: 145 VLKAGGMLER--GTGRIVNIASTGG----------------------------------- 167
Query: 205 KDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGS 264
           K G   +         Y+ SK  +  +T  L       GI+VN+ CPGF +T M      
Sbjct: 168 KQGVVHA-------APYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVRE 220
Query: 265 HTAD 268
           H +D
Sbjct: 221 HYSD 224

>pdb|2RHR|B Chain B, P94l Actinorhodin Ketordeuctase Mutant, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 74.3 bits (181), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 67/244 (27%), Positives = 98/244 (40%), Gaps = 54/244 (22%)
Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           +A+VTGA  GIG  + +RL + GL V + AR  E  +  ++ L E G+  +    DV   
Sbjct: 24  VALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSV 83
Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAET----VIRTNFYGAKLLTES 147
             IEA V+     +  +D+LVNNAG         T E A+     V+ TN  G   +T+ 
Sbjct: 84  PEIEALVAAVVERYGPVDVLVNNAGRLGGG---ATAELADELWLDVVETNLTGVFRVTKQ 140
Query: 148 LLP---LFRRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFLQSV 204
           +L    +  R     RI+NI+S  G                                   
Sbjct: 141 VLKAGGMLER--GTGRIVNIASTGG----------------------------------- 163
Query: 205 KDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGS 264
           K G   +         Y+ SK  +  +T  L       GI+VN+ CPGF +T M      
Sbjct: 164 KQGVVHA-------APYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVRE 216
Query: 265 HTAD 268
           H +D
Sbjct: 217 HYSD 220

>pdb|3OSU|A Chain A, Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Protein Reductase, Fabg, From Staphylococcus Aureus Length = 246

Iteration: 1
 Score = 74.3 bits (181), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 62/229 (27%), Positives = 98/229 (42%), Gaps = 45/229 (19%)
Query: 33  AIVTGANKGIGFALVKRLAELGLTVILT-ARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           A+VTGA++GIG ++  +LAE G  V +  A   E+ +  VE +  KG+     Q +V+D 
Sbjct: 7   ALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADA 66
Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHA-ETVIRTNFYGAKLLTESLLP 150
             ++A +    S F +LD+LVNNAG++ +++     E   + VI TN  G     +   P
Sbjct: 67  DEVKAXIKEVVSQFGSLDVLVNNAGITRDNLLXRXKEQEWDDVIDTNLKGVFNCIQKATP 126
Query: 151 LFRRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFLQSVKDGTWK 210
              R  S + I+N+SS +G    V NP                                 
Sbjct: 127 QXLRQRSGA-IINLSSVVGA---VGNPG-------------------------------- 150
Query: 211 SQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMT 259
                    +Y  +K  +   T   A+     GI+VN+  PGF  +  T
Sbjct: 151 -------QANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDXT 192

>pdb|3AI1|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Reveals The Structure Bases Of Its Catalytic Mechanism And High Substrate Selectivity Length = 263

Iteration: 1
 Score = 73.2 bits (178), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 47/136 (34%), Positives = 71/136 (52%), Gaps = 2/136 (1%)
Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEK-GLPVNFFQLDVSD 90
           +A++TG++ GIG A+ +  A+ G  ++L AR V+R   A  SL EK G+ V    +DV+ 
Sbjct: 9   VAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVAT 68
Query: 91  PSSIEAFVSWFKSNFAALDILVNNAGVSFND-IYKNTVEHAETVIRTNFYGAKLLTESLL 149
           P  ++A V   +S+F   DILVNNAG   N+ I +   E  +     +   A  L   L+
Sbjct: 69  PEGVDAVVESVRSSFGGADILVNNAGTGSNETIMEAADEKWQFYWELHVMAAVRLARGLV 128
Query: 150 PLFRRSPSKSRILNIS 165
           P  R     + I N S
Sbjct: 129 PGMRARGGGAIIHNAS 144

>pdb|4AFN|A Chain A, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein) Reductase (fabg) From Pseudomonas Aeruginosa At 2.3a Resolution Length = 269

Iteration: 1
 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 61/233 (26%), Positives = 98/233 (42%), Gaps = 50/233 (21%)
Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           +A+VTGA++GIG A+   L  LG  VI TA      ++  E+L   G+      LDVS  
Sbjct: 29  VALVTGASRGIGQAIALELGRLGAVVIGTATSASGAEKIAETLKANGVEGAGLVLDVSSD 88
Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHA-ETVIRTNFYGAKLLTESLLP 150
            S+ A +   + +     I+VNNAG++ +++     +     V+ TN      L++++L 
Sbjct: 89  ESVAATLEHIQQHLGQPLIVVNNAGITRDNLLVRMKDDEWFDVVNTNLNSLYRLSKAVL- 147
Query: 151 LFRRSPSKS---RILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFLQSVKDG 207
              R  +K+   RI+NI S +G +                                    
Sbjct: 148 ---RGMTKARWGRIINIGSVVGAMGNAGQ------------------------------- 173
Query: 208 TWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ 260
                      T+YA +K  L  +T  LA+      I+VN+  PGF  T MT+
Sbjct: 174 -----------TNYAAAKAGLEGFTRALAREVGSRAITVNAVAPGFIDTDMTR 215

>pdb|4DC0|A Chain A, Crystal Structure Of F189w Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 66/244 (27%), Positives = 98/244 (40%), Gaps = 54/244 (22%)
Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           +A+VTGA  GIG  + +RL + GL V + AR  E  +  ++ L E G+  +    DV   
Sbjct: 28  VALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSV 87
Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAET----VIRTNFYGAKLLTES 147
             IEA V+     +  +D+LVNNAG         T E A+     V+ TN  G   +T+ 
Sbjct: 88  PEIEALVAAVVERYGPVDVLVNNAGRPGGG---ATAELADELWLDVVETNLTGVFRVTKQ 144
Query: 148 LLP---LFRRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFLQSV 204
           +L    +  R     RI+NI+S  G                                   
Sbjct: 145 VLKAGGMLER--GTGRIVNIASTGG----------------------------------- 167
Query: 205 KDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGS 264
           K G   +         Y+ SK  +  +T  L       GI+VN+ CPG+ +T M      
Sbjct: 168 KQGVVHA-------APYSASKHGVVGFTKALGLELARTGITVNAVCPGWVETPMAASVRE 220
Query: 265 HTAD 268
           H +D
Sbjct: 221 HYSD 224

>pdb|2YZ7|A Chain A, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From Alcaligenes Faecalis Length = 260

Iteration: 1
 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 66/266 (24%), Positives = 109/266 (40%), Gaps = 55/266 (20%)
Query: 33  AIVTGANKGIGFALVKRLAELGLTVILTA----RDVERGQRAVESLSEKGLPVNFFQLDV 88
           A+VTG+  GIG A+   LA+ G  V++       D+ER +  +ES  + G+   +   D+
Sbjct: 7   AVVTGSTSGIGLAMATELAKAGADVVINGFGQPEDIERERSTLES--KFGVKAYYLNADL 64
Query: 89  SDPSSIEAFVSWFKSNFAALDILVNNAGVSFND-IYKNTVEHAETVIRTNFYGAKLLTES 147
           SD  +   F++        LDILVNNAG+     I +  V+    +I  N       T +
Sbjct: 65  SDAQATRDFIAKAAEALGGLDILVNNAGIQHTAPIEEFPVDKWNAIIALNLSAVFHGTAA 124
Query: 148 LLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFLQSVKDG 207
            LP+ ++     RI+NI+S  G ++ V                                 
Sbjct: 125 ALPIMQKQ-GWGRIINIASAHGLVASVNK------------------------------- 152
Query: 208 TWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTA 267
                      + Y  +K  +   T V A    G+GI+ N+ CPG+ +T + + Q    +
Sbjct: 153 -----------SAYVAAKHGVVGLTKVTALENAGKGITCNAICPGWVRTPLVEKQIEAIS 201
Query: 268 DEAA---DVGARLLLLHPQQLPTAKF 290
            +     +  AR LL   Q  P+ +F
Sbjct: 202 QQKGIDIEAAARELLAEKQ--PSLQF 225

>pdb|2UVD|A Chain A, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis (Ba3989) Length = 246

Iteration: 1
 Score = 72.0 bits (175), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 70/264 (26%), Positives = 110/264 (41%), Gaps = 56/264 (21%)
Query: 29  KETIAIVTGANKGIGFALVKRLAELGLTVILT-ARDVERGQRAVESLSEKGLPVNFFQLD 87
           K  +A+VTGA++GIG A+   LA+ G  V++  A + ++    V+ + + G      + D
Sbjct: 3   KGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRAD 62
Query: 88  VSDPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHA-ETVIRTNFYGAKLLTE 146
           V++   +   V      F  +DILVNNAGV+ +++     E   +TVI TN  G  L T+
Sbjct: 63  VANAEDVTNMVKQTVDVFGQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTK 122
Query: 147 SLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFLQSVKD 206
           ++     R     RI+NI+S +G      NP                             
Sbjct: 123 AVSRFMMRQ-RHGRIVNIASVVGVTG---NPG---------------------------- 150
Query: 207 GTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHT 266
                        +Y  +K  +   T   AK      I+VN+  PGF  T MT       
Sbjct: 151 -----------QANYVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDMT-----DV 194
Query: 267 ADEAADVGARLLLLHPQQLPTAKF 290
            DE  ++ A +L L    +P A+F
Sbjct: 195 LDE--NIKAEMLKL----IPAAQF 212

>pdb|3ASU|A Chain A, Crystal Structure Of Serine Dehydrogenase From Escherichia Coli Length = 248

Iteration: 1
 Score = 72.0 bits (175), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 51/142 (35%), Positives = 76/142 (53%), Gaps = 8/142 (5%)
Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           I +VTGA  G G  + +R  + G  VI T R  ER Q   E   E G  +   QLDV + 
Sbjct: 2   IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQ---ELKDELGDNLYIAQLDVRNR 58
Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSFN--DIYKNTVEHAETVIRTNFYGAKLLTESLL 149
           ++IE  ++   + +  +DILVNNAG++      +K +VE  ET+I TN  G   +T ++L
Sbjct: 59  AAIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVL 118
Query: 150 P-LFRRSPSKSRILNISSRLGT 170
           P +  R  +   I+NI S  G+
Sbjct: 119 PGMVER--NHGHIINIGSTAGS 138

>pdb|2CF2|E Chain E, Architecture Of Mammalian Fatty Acid Synthase Length = 226

Iteration: 1
 Score = 71.6 bits (174), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 69/236 (29%), Positives = 106/236 (44%), Gaps = 62/236 (26%)
Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVE---SLSEKGLPVNFFQLDV 88
           IA+VTGA++GIG A+ + LA  G  VI TA   E G +A+      + KGL      L+V
Sbjct: 7   IALVTGASRGIGRAIAETLAARGAKVIGTATS-ENGAQAISDYLGANGKGL-----MLNV 60
Query: 89  SDPSSIEAFVSWFKSNFAALDILVNNAGVSFND-IYKNTVEHAETVIRTNFYGAKLLTES 147
           +DP+SIE+ +   ++ F  +DILVNNAG++ ++ + +   E    +I TN          
Sbjct: 61  TDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETN---------- 110
Query: 148 LLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFLQSVKDG 207
           L  +FR S +  R + +  R G                         R + +  Q+    
Sbjct: 111 LSSVFRLSKAVMRAM-MKKRHG-------------------------RIITIGGQA---- 140
Query: 208 TWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQG 263
                       +YA +K  L  ++  LA+     GI+VN   PGF +TS  Q  G
Sbjct: 141 ------------NYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETSDDQRAG 184

>pdb|3AI3|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Length = 263

Iteration: 1
 Score = 71.6 bits (174), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 47/141 (33%), Positives = 70/141 (49%), Gaps = 12/141 (8%)
Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEK-GLPVNFFQLDVSD 90
           +A++TG++ GIG A+ +  A+ G  ++L AR V+R   A  SL EK G+ V    +DV+ 
Sbjct: 9   VAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVAT 68
Query: 91  PSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFY------GAKLL 144
           P  ++A V   +S+F   DILVNNAG   N+      +      +  FY       A  L
Sbjct: 69  PEGVDAVVESVRSSFGGADILVNNAGTGSNETIMEAADE-----KWQFYWELLVMAAVRL 123
Query: 145 TESLLPLFRRSPSKSRILNIS 165
              L+P  R     + I N S
Sbjct: 124 ARGLVPGMRARGGGAIIHNAS 144

>pdb|3U5T|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Sinorhizobium Meliloti Length = 267

Iteration: 1
 Score = 71.2 bits (173), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 76/271 (28%), Positives = 109/271 (40%), Gaps = 55/271 (20%)
Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILT----ARDVERGQRAVESLSEKGLPVNFFQLD 87
           +AIVTGA++GIG A+  RLA  G TV++     A   E     +E+   K L     Q D
Sbjct: 29  VAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTA---QAD 85
Query: 88  VSDPSSIEAFVSWFKSNFAALDILVNNAGVS-FNDIYKNTVEHAETVIRTNFYGAKLLTE 146
           VSDP+++    +  +  F  +D+LVNNAG+     I +      + VI  N  G      
Sbjct: 86  VSDPAAVRRLFATAEEAFGGVDVLVNNAGIXPLTTIAETGDAVFDRVIAVNLKG---TFN 142
Query: 147 SLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFLQSVKD 206
           +L    +R     RI+N S+                              VGL   S   
Sbjct: 143 TLREAAQRLRVGGRIINXSTSQ----------------------------VGLLHPS--- 171
Query: 207 GTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSM-TQGQGSH 265
                      +  YA +K  + A T VL+K   G  I+VN+  PG T T +  +G+   
Sbjct: 172 -----------YGIYAAAKAGVEAXTHVLSKELRGRDITVNAVAPGPTATDLFLEGKSDE 220
Query: 266 TADEAADVGARLLLLHPQQLPTA-KFYIGLD 295
             D  A +     L  PQ +  A  F  G D
Sbjct: 221 VRDRFAKLAPLERLGTPQDIAGAVAFLAGPD 251

>pdb|2PNF|A Chain A, Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-carrier Protein) Reductase Length = 248

Iteration: 1
 Score = 70.9 bits (172), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 61/231 (26%), Positives = 104/231 (45%), Gaps = 47/231 (20%)
Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEK-GLPVNFFQLDVSD 90
           +++VTG+ +GIG A+ ++LA  G TVI+T    ER +   E ++ K G+  +  ++++  
Sbjct: 9   VSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLS 68
Query: 91  PSSIEAFVSWFKSNFAALDILVNNAGVSFNDIY-KNTVEHAETVIRTNFYGAKLLTE-SL 148
             SI        +    +DILVNNAG++ + ++ + ++   E V++ N  G  L+T+ SL
Sbjct: 69  EESINKAFEEIYNLVDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSL 128
Query: 149 LPLFRRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFLQSVKDGT 208
             + ++     RI+NISS +G    V   N                              
Sbjct: 129 RKMIKQRW--GRIVNISSVVGFTGNVGQVN------------------------------ 156
Query: 209 WKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMT 259
                       Y+ +K  L  +T  LAK      + VN+  PGF +T MT
Sbjct: 157 ------------YSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMT 195

>pdb|1GEG|A Chain A, Cryatal Structure Analysis Of Meso-2,3-Butanediol Dehydrogenase Length = 256

Iteration: 1
 Score = 70.9 bits (172), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 57/228 (25%), Positives = 91/228 (39%), Gaps = 43/228 (18%)
Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           +A+VTGA +GIG A+  RL + G  V +   +    +     +++ G      ++DVSD 
Sbjct: 4   VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDR 63
Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVS-FNDIYKNTVEHAETVIRTNFYGAKLLTESLLP 150
             + A V   +      D++VNNAGV+    I   T E  + V   N  G     ++ + 
Sbjct: 64  DQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVE 123
Query: 151 LFRRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFLQSVKDGTWK 210
            F++     +I+N  S+ G +                                       
Sbjct: 124 AFKKEGHGGKIINACSQAGHV--------------------------------------- 144
Query: 211 SQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSM 258
             G PE+   Y+ SK A+   T   A+     GI+VN YCPG  +T M
Sbjct: 145 --GNPELAV-YSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPM 189

>pdb|1AE1|A Chain A, Tropinone Reductase-I Complex With Nadp Length = 273

Iteration: 1
 Score = 70.1 bits (170), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 68/238 (28%), Positives = 102/238 (42%), Gaps = 45/238 (18%)
Query: 25  KWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFF 84
           +W  K T A+VTG +KGIG+A+V+ LA LG  V   +R+ +     +E   EKGL V   
Sbjct: 16  RWSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGS 75
Query: 85  QLDVSDPSSIEAFVSWFKSNF-AALDILVNNAGVSFNDIYKNTVEHAETVIR-TNFYGAK 142
             D+   +  +  +      F   L+ILVNNAGV  +   K+  E    +I  TNF  A 
Sbjct: 76  VCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAY 135
Query: 143 LLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFLQ 202
            L++   PL + S                   +N N+                   +FL 
Sbjct: 136 HLSQIAYPLLKAS-------------------QNGNV-------------------IFLS 157
Query: 203 SVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ 260
           S+   +      P + + Y+ SK A+N  T  LA  +  + I VNS  PG   T + +
Sbjct: 158 SIAGFS----ALPSV-SLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVE 210

>pdb|3CXR|A Chain A, Crystal Structure Of Gluconate 5-Dehydrogase From Streptococcus Suis Type 2 Length = 291

Iteration: 1
 Score = 69.3 bits (168), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 56/232 (24%), Positives = 93/232 (40%), Gaps = 44/232 (18%)
Query: 29  KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDV 88
           K  IA+VTGA+ GIGFA+    A+ G T++    + E   R + +    G+  + +  DV
Sbjct: 33  KGKIALVTGASYGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAAGINAHGYVCDV 92
Query: 89  SDPSSIEAFVSWFKSNFAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTES 147
           +D   I+A V+  +S    +DILVNNAG+     + + T      VI  +     +++++
Sbjct: 93  TDEDGIQAMVAQIESEVGIIDILVNNAGIIRRVPMIEMTAAQFRQVIDIDLNAPFIVSKA 152
Query: 148 LLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFLQSVKDG 207
           ++P   +     +I+NI S +  L +                                  
Sbjct: 153 VIPSMIKK-GHGKIINICSMMSELGR---------------------------------- 177
Query: 208 TWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMT 259
                   E  + YA +K  L   T  +A  Y    I  N   PG+  T  T
Sbjct: 178 --------ETVSAYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQT 221

>pdb|2B4Q|A Chain A, Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex Length = 276

Iteration: 1
 Score = 68.6 bits (166), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 68/242 (28%), Positives = 98/242 (40%), Gaps = 50/242 (20%)
Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           IA+VTG ++GIG  + + L E G  V + ARD E        LS  G        D+S  
Sbjct: 31  IALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYG-DCQAIPADLSSE 89
Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKN-TVEHAETVIRTNFYGAKLLTESLLP 150
           +             A LDILVNNAG S+    ++  V   E V++ N        + LLP
Sbjct: 90  AGARRLAQALGELSARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLP 149
Query: 151 LFRRSPSK---SRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFLQSVKDG 207
           L RRS S    +R++NI S  G                               + ++ + 
Sbjct: 150 LLRRSASAENPARVINIGSVAG-------------------------------ISAMGEQ 178
Query: 208 TWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTA 267
            +           Y  SK AL+  + +LAK   GE I+VN   PG   + MT+    H A
Sbjct: 179 AYA----------YGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTR----HIA 224
Query: 268 DE 269
           ++
Sbjct: 225 ND 226

>pdb|2C07|A Chain A, Oxoacyl-Acp Reductase Of Plasmodium Falciparum Length = 285

Iteration: 1
 Score = 67.8 bits (164), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 100/240 (41%), Gaps = 52/240 (21%)
Query: 26  WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQ 85
           +  +  +A+VTGA +GIG  + K LA+    VI  +R  +     V+ +   G   + + 
Sbjct: 40  YCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYA 99
Query: 86  LDVSDPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIY---KNTVEHAETVIRTNFYGAK 142
            DVS    I   ++   +    +DILVNNAG++ ++++   KN  +  E V+RTN     
Sbjct: 100 GDVSKKEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKN--DEWEDVLRTNLNSLF 157
Query: 143 LLTESLLPLFRRSPSK--SRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLF 200
            +T+   P+ +R  +    RI+NISS +G    V   N                      
Sbjct: 158 YITQ---PISKRMINNRYGRIINISSIVGLTGNVGQAN---------------------- 192
Query: 201 LQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ 260
                               Y+ SK  +  +T  LAK      I+VN+  PGF  + MT 
Sbjct: 193 --------------------YSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTD 232

>pdb|4G81|D Chain D, Crystal Structure Of A Hexonate Dehydrogenase Ortholog (Target Efi- 506402 From Salmonella Enterica, Unliganded Structure Length = 255

Iteration: 1
 Score = 67.0 bits (162), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 45/135 (33%), Positives = 71/135 (52%), Gaps = 1/135 (0%)
Query: 33  AIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPS 92
           A+VTG+ +G+GFA  + LA  G  VIL          +V++L+ KG   +    DV+D  
Sbjct: 12  ALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDEL 71
Query: 93  SIEAFVSWFKSNFAALDILVNNAGVSFND-IYKNTVEHAETVIRTNFYGAKLLTESLLPL 151
           +IEA  S   +    +DIL+NNAG+ +   + +  +E+ + VI TN   A L++ S    
Sbjct: 72  AIEAAFSKLDAEGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKR 131
Query: 152 FRRSPSKSRILNISS 166
                S  +I+NI S
Sbjct: 132 MIARNSGGKIINIGS 146

>pdb|3TN7|A Chain A, Crystal Structure Of Short-Chain Alcohol Dehydrogenase From Hyperthermophilic Archaeon Thermococcus Sibiricus Complexed With 5- Hydroxy-Nadp Length = 257

Iteration: 1
 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 44/141 (31%), Positives = 77/141 (54%), Gaps = 4/141 (2%)
Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQR-AVESLSEKGLPVNFFQLDVSD 90
           +A++TGA++GIG A+ + LA  G  + L AR V+R ++ A E + E+G+ V +  LDVS 
Sbjct: 26  VAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSK 85
Query: 91  PSSIEAFVSWFKSNFAALDILVNNAGVS-FNDIYKNTVEHAETVIRTNFYGAKLLTESLL 149
             S+E F       F  +D++V NAG+  F  + + + E    +I  N  G     ++ L
Sbjct: 86  AESVEEFSKKVLERFGDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFL 145
Query: 150 PLFRRSPSKSRIL--NISSRL 168
              +R+   + +   ++S+RL
Sbjct: 146 DSLKRTGGLALVTTSDVSARL 166

>pdb|3L77|A Chain A, X-Ray Structure Alcohol Dehydrogenase From Archaeon Thermococcus Sibiricus Complexed With 5-Hydroxy-Nadp Length = 235

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 44/141 (31%), Positives = 77/141 (54%), Gaps = 4/141 (2%)
Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQR-AVESLSEKGLPVNFFQLDVSD 90
           +A++TGA++GIG A+ + LA  G  + L AR V+R ++ A E + E+G+ V +  LDVS 
Sbjct: 4   VAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSK 63
Query: 91  PSSIEAFVSWFKSNFAALDILVNNAGVS-FNDIYKNTVEHAETVIRTNFYGAKLLTESLL 149
             S+E F       F  +D++V NAG+  F  + + + E    +I  N  G     ++ L
Sbjct: 64  AESVEEFSKKVLERFGDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFL 123
Query: 150 PLFRRSPSKSRIL--NISSRL 168
              +R+   + +   ++S+RL
Sbjct: 124 DSLKRTGGLALVTTSDVSARL 144

>pdb|4E3Z|A Chain A, Crystal Structure Of A Oxidoreductase From Rhizobium Etli Cfn 42 Length = 272

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 94/241 (39%), Gaps = 46/241 (19%)
Query: 28  SKETIAIVTGANKGIGFALVKRLAELGLTVILT-ARDVERGQRAVESLSEKGLPVNFFQL 86
           S   + +VTG ++GIG A+ +  A  G  V +  A + E     V +++E G        
Sbjct: 24  SDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPG 83
Query: 87  DVSDPSSIEAFVSWFKSNFAALDILVNNAGVSF--NDIYKNTVEHAETVIRTNFYGAKLL 144
           DV + + I A  S     F  LD LVNNAG+      + + +VE  E  +R N  G+ L 
Sbjct: 84  DVGNAADIAAXFSAVDRQFGRLDGLVNNAGIVDYPQRVDEXSVERIERXLRVNVTGSILC 143
Query: 145 TESLLPLFRR--SPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFLQ 202
               +    R  S     I+N+SS    L                               
Sbjct: 144 AAEAVRRXSRLYSGQGGAIVNVSSXAAIL------------------------------- 172
Query: 203 SVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ 262
                     G    + DYA SK A++ +T+ LA+    EGI VN+  PG  +T +    
Sbjct: 173 ----------GSATQYVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASG 222
Query: 263 G 263
           G
Sbjct: 223 G 223

>pdb|3N74|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reduc Brucella Melitensis Length = 261

Iteration: 1
 Score = 65.9 bits (159), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 71/140 (50%), Gaps = 8/140 (5%)
Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           +A++TGA  G G  + KR A+ G  V++  RD    +R    + +  L V     D+S  
Sbjct: 11  VALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAV---AADISKE 67
Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAE--TVIRTNFYGAKLLTESLL 149
           + ++A V    S F  +DILVNNAG+         VE  E   ++  N  G  L+T  L+
Sbjct: 68  ADVDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLI 127
Query: 150 PLFRRSPSKSR---ILNISS 166
           P F+ + +K +   ILN++S
Sbjct: 128 PHFKENGAKGQECVILNVAS 147

>pdb|3AK4|A Chain A, Crystal Structure Of Nadh-Dependent Quinuclidinone Reductase From Agrobacterium Tumefaciens Length = 263

Iteration: 1
 Score = 65.5 bits (158), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 62/229 (27%), Positives = 90/229 (39%), Gaps = 46/229 (20%)
Query: 33  AIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPS 92
           AIVTG +KGIG A+ + L + G TV +   DV   Q  V  L   G  V   ++DV+  +
Sbjct: 15  AIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAV---EVDVTKRA 71
Query: 93  SIEAFVSWFKSNFAALDILVNNAGVS-FNDIYKNTVEHAETVIRTNFYGAKLLTESLLPL 151
           S++A +          D+L  NAGVS        T E  +     N  G  L  +     
Sbjct: 72  SVDAAMQKAIDALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRH 131
Query: 152 FRRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFLQSVKDGTWKS 211
           F  S +K  I+N +S     +KV  P                                  
Sbjct: 132 FLASNTKGVIVNTAS---LAAKVGAP---------------------------------- 154
Query: 212 QGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ 260
                +   Y+ SK A+  +T  LA+    + I VN  CPGF +T+M +
Sbjct: 155 -----LLAHYSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQE 198

>pdb|1EDO|A Chain A, The X-Ray Structure Of Beta-Keto Acyl Carrier Protein Reductase From Brassica Napus Complexed With Nadp+ Length = 244

Iteration: 1
 Score = 65.1 bits (157), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 53/230 (23%), Positives = 94/230 (40%), Gaps = 45/230 (19%)
Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILT-ARDVERGQRAVESLSEKGLPVNFFQLDVSD 90
           + +VTGA++GIG A+   L + G  V++  AR  +  +   + +   G     F  DVS 
Sbjct: 3   VVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSK 62
Query: 91  PSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHA-ETVIRTNFYGAKLLTESLL 149
            + +EA +      +  +D++VNNAG++ + +     +   + VI  N  G  L T++  
Sbjct: 63  EADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAAT 122
Query: 150 PLFRRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFLQSVKDGTW 209
            +  +   K RI+NI+S +G +  +   N                               
Sbjct: 123 KIMMK-KRKGRIINIASVVGLIGNIGQAN------------------------------- 150
Query: 210 KSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMT 259
                      YA +K  +  ++   A+      I+VN  CPGF  + MT
Sbjct: 151 -----------YAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMT 189

>pdb|1SPX|A Chain A, Crystal Structure Of Glucose Dehydrogenase Of Caenorhabditis Elegans In The Apo-Form Length = 278

Iteration: 1
 Score = 65.1 bits (157), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 92/242 (38%), Gaps = 51/242 (21%)
Query: 30  ETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLP---VNFFQL 86
           E +AI+TG++ GIG A     A  G  V +T R  ER +   + +   G+    VN    
Sbjct: 6   EKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVA 65
Query: 87  DVSDPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNT-----VEHAETVIRTNFYGA 141
           DV+  +  +  +S     F  LDILVNNAG +  D    T     +E  +  +  N    
Sbjct: 66  DVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSV 125
Query: 142 KLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFL 201
             LT+  +P    S +K  I+NIS                                    
Sbjct: 126 IALTKKAVPHL--SSTKGEIVNIS------------------------------------ 147
Query: 202 QSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG 261
            S+  G   +  +P     Y+++K A++ YT   A      GI VNS  PG   T     
Sbjct: 148 -SIASGLHATPDFPY----YSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSA 202
Query: 262 QG 263
            G
Sbjct: 203 MG 204

>pdb|3GRP|A Chain A, 2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Bartonella Henselae Length = 266

Iteration: 1
 Score = 64.3 bits (155), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 60/229 (26%), Positives = 93/229 (40%), Gaps = 49/229 (21%)
Query: 33  AIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPS 92
           A+VTGA  GIG A+ +     G  V L      R  +  E  ++ G  V  F  ++SD  
Sbjct: 30  ALVTGATGGIGEAIARCFHAQGAIVGLHG---TREDKLKEIAADLGKDVFVFSANLSDRK 86
Query: 93  SIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHA-ETVIRTNFYGAKLLTESLL-P 150
           SI+      +     +DILVNNAG++ + ++    +   + V+  N   A  LT  L+  
Sbjct: 87  SIKQLAEVAEREMEGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHS 146
Query: 151 LFRRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFLQSVKDGTWK 210
           + RR     RI+NI+S +G    V NP                                 
Sbjct: 147 MMRR--RYGRIINITSIVGV---VGNPG-------------------------------- 169
Query: 211 SQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMT 259
                   T+Y  +K  L  ++  LA+      I+VN   PGF +++MT
Sbjct: 170 -------QTNYCAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMT 211

>pdb|2CFC|A Chain A, Structural Basis For Stereo Selectivity In The (R)- And (S)- Hydroxypropylethane Thiosulfonate Dehydrogenases Length = 250

Iteration: 1
 Score = 63.9 bits (154), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 66/237 (27%), Positives = 96/237 (40%), Gaps = 54/237 (22%)
Query: 32  IAIVTGANKGIGFALVKRLAELGLTVI---LTARDVERGQRAV-ESLSEKGLPVNFFQLD 87
           +AIVTGA+ G G A+  R    G  V    L+A  +E   R    + ++K L V   + D
Sbjct: 4   VAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRV---RAD 60
Query: 88  VSDPSSIEAFVSWFKSNFAALDILVNNAGVSFND----IYKNTVEHAETVIRTNFYGAKL 143
           V+D   + A ++     F A+D+LVNNAG++ N     ++   VE  + V+  N  G  L
Sbjct: 61  VADEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFL 120
Query: 144 LTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFLQS 203
              ++LP          I+NI+S     S V  P                          
Sbjct: 121 GCRAVLPHMLLQ-GAGVIVNIAS---VASLVAFPG------------------------- 151
Query: 204 VKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ 260
                          + Y  SK A+   T  +A  Y G GI  N+ CPG  +T MTQ
Sbjct: 152 --------------RSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQ 194

>pdb|2JAP|A Chain A, Clavulanic Acid Dehydrogenase: Structural And Biochemical Analysis Of The Final Step In The Biosynthesis Of The Beta- Lactamase Inhibitor Clavulanic Acid Length = 247

Iteration: 1
 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 69/241 (28%), Positives = 106/241 (43%), Gaps = 54/241 (22%)
Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           +A++TGA+ GIG A  + LA  G  V + AR VE+ +   + L+  G  V+  +LDV+D 
Sbjct: 9   VALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADR 68
Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAET-----VIRTNFYGAKLLTE 146
             ++A V+        LDILVNNAG+    +    VE A+T     +I TN  G   +T 
Sbjct: 69  QGVDAAVASTVEALGGLDILVNNAGI----MLLGPVEDADTTDWTRMIDTNLLGLMYMTR 124
Query: 147 SLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFLQSVKD 206
           + LP   R  SK  ++ +SS  G ++ VRN  +                           
Sbjct: 125 AALPHLLR--SKGTVVQMSSIAGRVN-VRNAAV--------------------------- 154
Query: 207 GTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHT 266
                         Y  +K  +NA++  L +     G+ V    PG T T + +G  +HT
Sbjct: 155 --------------YQATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTEL-RGHITHT 199
Query: 267 A 267
           A
Sbjct: 200 A 200

>pdb|3GVC|A Chain A, Crystal Structure Of Probable Short-Chain Dehydrogenase- Reductase From Mycobacterium Tuberculosis Length = 277

Iteration: 1
 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/143 (34%), Positives = 70/143 (48%), Gaps = 7/143 (4%)
Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           +AIVTGA  GIG A+ +RLA+ G  V+    D      A  + ++ G      ++DVSD 
Sbjct: 31  VAIVTGAGAGIGLAVARRLADEGCHVLCADIDG---DAADAAATKIGCGAAACRVDVSDE 87
Query: 92  SSIEAFVSWFKSNFAALDILVNNAG-VSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLP 150
             I A V    + F  +D LV NAG V    +   TVE  + VI  N  GA L T+   P
Sbjct: 88  QQIIAMVDACVAAFGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAP 147
Query: 151 -LFRRSPSKSRILNISSRLGTLS 172
            +  R      I+N+SS  G ++
Sbjct: 148 RMIERGGGA--IVNLSSLAGQVA 168

>pdb|2ZAT|A Chain A, Crystal Structure Of A Mammalian Reductase Length = 260

Iteration: 1
 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 61/231 (26%), Positives = 96/231 (41%), Gaps = 45/231 (19%)
Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           +A+VT +  GIG A+ +RLA+ G  V++++R  E   R V +L  +GL V      V   
Sbjct: 16  VALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKA 75
Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVS--FNDIYKNTVEHAETVIRTNFYGAKLLTESLL 149
              E  V+   +    +DILV+NA V+  F +I   T E  + ++  N     L+T++++
Sbjct: 76  EDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVV 135
Query: 150 PLFRRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFLQSVKDGTW 209
           P   +    S +L +SS                              VG +         
Sbjct: 136 PEMEKRGGGS-VLIVSS------------------------------VGAY--------- 155
Query: 210 KSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ 260
               +P +   Y VSK AL   T  LA       I VN   PG  +T+ +Q
Sbjct: 156 --HPFPNLGP-YNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQ 203

>pdb|3V2G|A Chain A, Crystal Structure Of A DehydrogenaseREDUCTASE FROM SINORHIZOBIUM Meliloti 1021 Length = 271

Iteration: 1
 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 86/235 (36%), Gaps = 46/235 (19%)
Query: 33  AIVTGANKGIGFALVKRLAELGLTVILT-ARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           A VTG ++GIG A+ KRLA  G  V LT     ER Q  V  + + G      + D  D 
Sbjct: 34  AFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDA 93
Query: 92  SSIEAFVSWFKSNFAALDILVNNAGV-SFNDIYKNTVEHAETVIRTNFYGAKLLTESLLP 150
            +IE  +         LDILVN+AG+     + + TV   + V   NF    +   S   
Sbjct: 94  EAIEQAIRETVEALGGLDILVNSAGIWHSAPLEETTVADFDEVXAVNFRAPFVAIRS--- 150
Query: 151 LFRRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFLQSVKDGTWK 210
             R      RI+ I S L  L                                       
Sbjct: 151 ASRHLGDGGRIITIGSNLAELVP------------------------------------- 173
Query: 211 SQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSH 265
              WP I + Y+ SK AL   T  LA+     GI+VN   PG T T      G H
Sbjct: 174 ---WPGI-SLYSASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDXNPADGDH 224

>pdb|1XHL|A Chain A, Crystal Structure Of Putative Tropinone Reductase-Ii From Caenorhabditis Elegans With Cofactor And Substrate Length = 297

Iteration: 1
 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/236 (25%), Positives = 94/236 (39%), Gaps = 49/236 (20%)
Query: 34  IVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLP---VNFFQLDVSD 90
           I+TG++ GIG +     A+ G  V +T R+ +R +   + + + G+P   +N    DV++
Sbjct: 30  IITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTE 89
Query: 91  PSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNT---VEHAETVIRTNFYGAKLLTES 147
            S  +  ++   + F  +DILVNNAG +  D   NT   VE  +   + NF     +T+ 
Sbjct: 90  ASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQK 149
Query: 148 LLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFLQSVKDG 207
                 +  +K  I+N+S                                     S+  G
Sbjct: 150 TKEHLIK--TKGEIVNVS-------------------------------------SIVAG 170
Query: 208 TWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQG 263
                G+P     YA +K AL+ YT   A      G+ VNS  PG   T      G
Sbjct: 171 PQAHSGYPY----YACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMG 222

>pdb|3NUG|A Chain A, Crystal Structure Of Wild Type Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247

Iteration: 1
 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 44/138 (31%), Positives = 76/138 (55%), Gaps = 10/138 (7%)
Query: 33  AIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPS 92
           A+VTGA +GIG A+  RLA  G TVI++  + E  + A  S+ +K   +     D+SDP 
Sbjct: 9   ALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAI---AADISDPG 65
Query: 93  SIEAFVSWFKSNFAALDILVNNAG----VSFNDIYKNTVEHAETVIRTNFYGAKLLTESL 148
           S++A  +  ++    +DILVNNA     V+++D+    ++H   +I  N  G  ++T + 
Sbjct: 66  SVKALFAEIQALTGGIDILVNNASIVPFVAWDDV---DLDHWRKIIDVNLTGTFIVTRAG 122
Query: 149 LPLFRRSPSKSRILNISS 166
               R +    R+++I+S
Sbjct: 123 TDQMRAAGKAGRVISIAS 140

>pdb|2PD6|A Chain A, Structure Of Human Hydroxysteroid Dehydrogenase Type 8, Hsd17b8 Length = 264

Iteration: 1
 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 95/241 (39%), Gaps = 51/241 (21%)
Query: 29  KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESL----SEKGLPVN-- 82
           +  +A+VTGA  GIG A+  RLA  G TV     D    Q  V  L    S++G P    
Sbjct: 6   RSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNH 65
Query: 83  -FFQLDVSDPSSIEAFVSWFKSNFA-ALDILVNNAGVSFNDIYKNTVEHA-ETVIRTNFY 139
             FQ DVS+  +    +   ++ F+    ++V+ AG++ ++   +  E   + VI  N  
Sbjct: 66  AAFQADVSEARAARCLLEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLK 125
Query: 140 GAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGL 199
           G  L+T++       +  +  I+NISS +G +  V                         
Sbjct: 126 GTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVGQ----------------------- 162
Query: 200 FLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMT 259
                              T+YA SK  +   T   A+     GI  NS  PGF  T MT
Sbjct: 163 -------------------TNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMT 203
Query: 260 Q 260
           Q
Sbjct: 204 Q 204

>pdb|1IPE|A Chain A, Tropinone Reductase-Ii Complexed With Nadph Length = 259

Iteration: 1
 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 77/153 (50%), Gaps = 9/153 (5%)
Query: 25  KWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFF 84
           +W  +   A+VTG ++GIG+ +V+ LA LG +V   +R+ +     +     KG  V   
Sbjct: 3   RWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEAS 62
Query: 85  QLDVSDPSSIEAFVSWFKSNF-AALDILVNNAGVSFNDIYKN----TVEHAETVIRTNFY 139
             D+S  S  +  ++   ++F   L+ILVNNAG+    IYK     TVE    ++  NF 
Sbjct: 63  VCDLSSRSERQELMNTVANHFHGKLNILVNNAGIV---IYKEAKDYTVEDYSLIMSINFE 119
Query: 140 GAKLLTESLLPLFRRSPSKSRILNISSRLGTLS 172
            A  L+    P F ++  +  ++ ISS  G L+
Sbjct: 120 AAYHLSVLAHP-FLKASERGNVVFISSVSGALA 151

>pdb|2AE2|A Chain A, Tropinone Reductase-Ii Complexed With Nadp+ And Pseudotropine Length = 260

Iteration: 1
 Score = 62.4 bits (150), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 77/153 (50%), Gaps = 9/153 (5%)
Query: 25  KWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFF 84
           +W  +   A+VTG ++GIG+ +V+ LA LG +V   +R+ +     +     KG  V   
Sbjct: 4   RWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEAS 63
Query: 85  QLDVSDPSSIEAFVSWFKSNF-AALDILVNNAGVSFNDIYKN----TVEHAETVIRTNFY 139
             D+S  S  +  ++   ++F   L+ILVNNAG+    IYK     TVE    ++  NF 
Sbjct: 64  VCDLSSRSERQELMNTVANHFHGKLNILVNNAGIV---IYKEAKDYTVEDYSLIMSINFE 120
Query: 140 GAKLLTESLLPLFRRSPSKSRILNISSRLGTLS 172
            A  L+    P F ++  +  ++ ISS  G L+
Sbjct: 121 AAYHLSVLAHP-FLKASERGNVVFISSVSGALA 152

>pdb|3NDR|A Chain A, Crystal Structure Of Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247

Iteration: 1
 Score = 62.4 bits (150), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 44/138 (31%), Positives = 76/138 (55%), Gaps = 10/138 (7%)
Query: 33  AIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPS 92
           A+VTGA +GIG A+  RLA  G TVI++  + E  + A  S+ +K   +     D+SDP 
Sbjct: 9   ALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAI---AADISDPG 65
Query: 93  SIEAFVSWFKSNFAALDILVNNAG----VSFNDIYKNTVEHAETVIRTNFYGAKLLTESL 148
           S++A  +  ++    +DILVNNA     V+++D+    ++H   +I  N  G  ++T + 
Sbjct: 66  SVKALFAEIQALTGGIDILVNNASIVPFVAWDDV---DLDHWRKIIDVNLTGTFIVTRAG 122
Query: 149 LPLFRRSPSKSRILNISS 166
               R +    R+++I+S
Sbjct: 123 TDQXRAAGKAGRVISIAS 140

>pdb|3AWD|A Chain A, Crystal Structure Of Gox2181 Length = 260

Iteration: 1
 Score = 62.4 bits (150), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 53/229 (23%), Positives = 94/229 (41%), Gaps = 39/229 (17%)
Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           +AIVTG  + IG A V  LAE G  VI+   D     +AVE L  +G  V+   +DV++ 
Sbjct: 15  VAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNT 74
Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPL 151
            S++  V         +DILV  AG+  +++    +   + + + +         +L  +
Sbjct: 75  ESVQNAVRSVHEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDI--------NLNGM 126
Query: 152 FRRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFLQSVKDGTWKS 211
           FR   +  RI+ +  + G +  + +                     GL +          
Sbjct: 127 FRSCQAVGRIM-LEQKQGVIVAIGS-------------------MSGLIVNR-------- 158
Query: 212 QGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ 260
              P+    Y  SK  ++ Y   LA  +   GI  N+  P + +T++T+
Sbjct: 159 ---PQQQAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTR 204

>pdb|3ENN|A Chain A, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE FROM BRUCELLA Melitensis (P43212) Length = 249

Iteration: 1
 Score = 62.0 bits (149), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 58/229 (25%), Positives = 95/229 (41%), Gaps = 49/229 (21%)
Query: 33  AIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPS 92
           A+VTGA  G+G A+ + L   G  V L      R ++  E  +E G  +  F  ++SD  
Sbjct: 13  ALVTGATGGLGEAIARALHAQGAIVGLHG---TREEKLKELAAELGERIFVFPANLSDRE 69
Query: 93  SIEAFVSWFKSNFAALDILVNNAGVSFNDIY-KNTVEHAETVIRTNFYGAKLLTESLL-P 150
           +++A     +     +DILVNNAG++ + ++ + + E  + V+  N      LT  L  P
Sbjct: 70  AVKALGQKAEEEMGGVDILVNNAGITRDGLFVRMSDEDWDAVLTVNLTSVFNLTRELTHP 129
Query: 151 LFRRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFLQSVKDGTWK 210
           + RR     RI+NI+S +G      NP                                 
Sbjct: 130 MMRR--RNGRIINITSIVGVTG---NPG-------------------------------- 152
Query: 211 SQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMT 259
                    +Y  SK  L  ++  LA+      ++VN   PGF +++MT
Sbjct: 153 -------QANYCASKAGLIGFSKSLAQEIASRNVTVNCIAPGFIESAMT 194

>pdb|1WMB|A Chain A, Crystal Structure Of Nad Dependent D-3-Hydroxybutylate Dehydrogenase Length = 260

Iteration: 1
 Score = 62.0 bits (149), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 61/270 (22%), Positives = 110/270 (40%), Gaps = 55/270 (20%)
Query: 29  KETIAIVTGANKGIGFALVKRLAELGLTVILT----ARDVERGQRAVESLSEKGLPVNFF 84
           K  +A+VTG+  GIG  +   LA  G  ++L     A ++E+ +  +   ++ G+ V + 
Sbjct: 3   KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLA--AQHGVKVLYD 60
Query: 85  QLDVSDPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKN-TVEHAETVIRTNFYGAKL 143
             D+S   ++   V         +DILVNNAG+    + ++   E  + ++  N      
Sbjct: 61  GADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFH 120
Query: 144 LTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFLQS 203
            T + LP  ++     RI+NI+S  G ++                               
Sbjct: 121 GTAAALPHMKKQ-GFGRIINIASAHGLVASANK--------------------------- 152
Query: 204 VKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQG 263
                          + Y  +K  +  +T V A    G+GI+ N+ CPG+ +T + + Q 
Sbjct: 153 ---------------SAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQI 197
Query: 264 SHTADEAA---DVGARLLLLHPQQLPTAKF 290
           S  A++     +  AR LL   Q  P+ +F
Sbjct: 198 SALAEKNGVDQETAARELLSEKQ--PSLQF 225

>pdb|2PH3|A Chain A, Crystal Structure Of 3-oxoacyl-[acyl Carrier Protein] Reductase Ttha0415 From Thermus Thermophilus Length = 245

Iteration: 1
 Score = 62.0 bits (149), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 62/231 (26%), Positives = 96/231 (41%), Gaps = 46/231 (19%)
Query: 33  AIVTGANKGIGFALVKRLAELGLTV-ILTARDVERGQRAVESLSEKGLP-VNFFQLDVSD 90
           A++TGA++GIG A+  RLAE G  + I   ++ E+ +   E    +G P V     ++ +
Sbjct: 4   ALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLE 63
Query: 91  PSSIEAFVSWFKSNFAALDILVNNAGVSFND-IYKNTVEHAETVIRTNFYGAKLLTESLL 149
             +  A V         LD LVNNAG++ +  + +   E  E V+  N       T   +
Sbjct: 64  AEAATALVHQAAEVLGGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAV 123
Query: 150 PLFRRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFLQSVKDGTW 209
            L  ++    RI+NI+S +G L    NP                                
Sbjct: 124 KLMMKA-RFGRIVNITSVVGILG---NPG------------------------------- 148
Query: 210 KSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ 260
                     +Y  SK  L  +T  +AK Y   GI+VN+  PGF +T MT+
Sbjct: 149 --------QANYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTE 191

>pdb|3EMK|A Chain A, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE From Brucella Melitensis Length = 246

Iteration: 1
 Score = 61.6 bits (148), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 58/229 (25%), Positives = 95/229 (41%), Gaps = 49/229 (21%)
Query: 33  AIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPS 92
           A+VTGA  G+G A+ + L   G  V L      R ++  E  +E G  +  F  ++SD  
Sbjct: 10  ALVTGATGGLGEAIARALHAQGAIVGLHG---TREEKLKELAAELGERIFVFPANLSDRE 66
Query: 93  SIEAFVSWFKSNFAALDILVNNAGVSFNDIY-KNTVEHAETVIRTNFYGAKLLTESLL-P 150
           +++A     +     +DILVNNAG++ + ++ + + E  + V+  N      LT  L  P
Sbjct: 67  AVKALGQKAEEEMGGVDILVNNAGITRDGLFVRMSDEDWDAVLTVNLTSVFNLTRELTHP 126
Query: 151 LFRRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFLQSVKDGTWK 210
           + RR     RI+NI+S +G      NP                                 
Sbjct: 127 MMRR--RNGRIINITSIVGVTG---NPG-------------------------------- 149
Query: 211 SQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMT 259
                    +Y  SK  L  ++  LA+      ++VN   PGF +++MT
Sbjct: 150 -------QANYCASKAGLIGFSKSLAQEIASRNVTVNCIAPGFIESAMT 191

>pdb|2NWQ|A Chain A, Short Chain Dehydrogenase From Pseudomonas Aeruginosa Length = 272

Iteration: 1
 Score = 61.6 bits (148), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 47/139 (33%), Positives = 67/139 (48%), Gaps = 7/139 (5%)
Query: 35  VTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKG--LPVNFFQLDVSDPS 92
           +TGA  G G A  +R AE G +++LT R  ER Q     LS K   LP+    LDV D +
Sbjct: 26  ITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLT---LDVRDRA 82
Query: 93  SIEAFVSWFKSNFAALDILVNNAGVSF--NDIYKNTVEHAETVIRTNFYGAKLLTESLLP 150
           +  A V      FA L  L+NNAG++   +      ++  +T + TN  G    T  LLP
Sbjct: 83  AXSAAVDNLPEEFATLRGLINNAGLALGTDPAQSCDLDDWDTXVDTNIKGLLYSTRLLLP 142
Query: 151 LFRRSPSKSRILNISSRLG 169
                 + + I+N+ S  G
Sbjct: 143 RLIAHGAGASIVNLGSVAG 161

>pdb|2EW8|A Chain A, Crystal Structure Of The (s)-specific 1-phenylethanol Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1 Length = 249

Iteration: 1
 Score = 61.6 bits (148), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 59/238 (24%), Positives = 97/238 (40%), Gaps = 56/238 (23%)
Query: 29  KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDV 88
           K+ +A++TG   GIG A+ +R A  G  + +   D+     A  ++   G  V   + DV
Sbjct: 6   KDKLAVITGGANGIGRAIAERFAVEGADIAIA--DLVPAPEAEAAIRNLGRRVLTVKCDV 63
Query: 89  SDPSSIEAFVSWFKSNFAALDILVNNAG----VSFNDIYKNTVEHAETVIRTNFYGAKLL 144
           S P  +EAF     S F   DILVNNAG    + F+++   T E  +     N     L+
Sbjct: 64  SQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDEL---TFEQWKKTFEINVDSGFLM 120
Query: 145 TESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFLQSV 204
            ++ +P  +R+    RI+N++S                                      
Sbjct: 121 AKAFVPGMKRN-GWGRIINLTS-------------------------------------- 141
Query: 205 KDGTWKSQGWPEI--WTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ 260
                 +  W +I  +T Y  +K A   +T  LA     +GI+VN+  P   +T+ T+
Sbjct: 142 ------TTYWLKIEAYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTE 193

>pdb|3UCX|A Chain A, The Structure Of A Short Chain Dehydrogenase From Mycobacterium Smegmatis Length = 264

Iteration: 1
 Score = 61.2 bits (147), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 51/226 (22%), Positives = 88/226 (38%), Gaps = 46/226 (20%)
Query: 30  ETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVS 89
           + + +++G    +G  L +R AE G  ++L AR VER +   + +++ G        D++
Sbjct: 11  DKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDIT 70
Query: 90  DPSSIEAFVSWFKSNFAALDILVNNA--GVSFNDIYKNTVEHAETVIRTNFYGAKLLTES 147
           D + +   V      +  +D+++NNA    S       T EH    I    +GA  L + 
Sbjct: 71  DDAQVAHLVDETMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQG 130
Query: 148 LLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFLQSVKDG 207
             P      SK  ++N++S +     VR+   K                           
Sbjct: 131 FTPALEE--SKGAVVNVNSMV-----VRHSQAK--------------------------- 156
Query: 208 TWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGF 253
                     +  Y ++K AL A +  LA     +GI VNS  PG+
Sbjct: 157 ----------YGAYKMAKSALLAMSQTLATELGEKGIRVNSVLPGY 192

>pdb|2JAH|A Chain A, Biochemical And Structural Analysis Of The Clavulanic Acid Dehydeogenase (Cad) From Streptomyces Clavuligerus Length = 247

Iteration: 1
 Score = 61.2 bits (147), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 69/241 (28%), Positives = 102/241 (42%), Gaps = 54/241 (22%)
Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           +A++TGA+ GIG A  + LA  G  V + AR VE+ +   + L+  G  V+  +LDV+D 
Sbjct: 9   VALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADR 68
Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETV-----IRTNFYGAKLLTE 146
             ++A V+        LDILVNNAG+         VE A+T      I TN  G    T 
Sbjct: 69  QGVDAAVASTVEALGGLDILVNNAGIXL----LGPVEDADTTDWTRXIDTNLLGLXYXTR 124
Query: 147 SLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFLQSVKD 206
           + LP   R  SK  ++  SS  G ++ VRN  +                           
Sbjct: 125 AALPHLLR--SKGTVVQXSSIAGRVN-VRNAAV--------------------------- 154
Query: 207 GTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHT 266
                         Y  +K  +NA++  L +     G+ V    PG T T + +G  +HT
Sbjct: 155 --------------YQATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTEL-RGHITHT 199
Query: 267 A 267
           A
Sbjct: 200 A 200

>pdb|1XKQ|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE OF Unknown Function From Caenorhabditis Elegans With Cofactor Length = 280

Iteration: 1
 Score = 60.8 bits (146), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 65/268 (24%), Positives = 106/268 (39%), Gaps = 54/268 (20%)
Query: 27  WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLP---VNF 83
           +S +T+ I+TG++ GIG       A+ G  V +T R  ER +   + + + G+    VN 
Sbjct: 4   FSNKTV-IITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNS 62
Query: 84  FQLDVSDPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNT-----VEHAETVIRTNF 138
              DV+     +  ++     F  +D+LVNNAG +  D +  T     ++     ++ N 
Sbjct: 63  VVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNL 122
Query: 139 YGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVG 198
                +T+ + P      SK  I+N+S      S V  P                     
Sbjct: 123 QAVIEMTKKVKP--HLVASKGEIVNVS------SIVAGP--------------------- 153
Query: 199 LFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSM 258
                        Q  P+ +  YA++K AL+ YT   A      GI VNS  PG  +T  
Sbjct: 154 -------------QAQPD-FLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGF 199
Query: 259 TQGQGSHTADEAADVGARLLLLHPQQLP 286
           T   G    D+A+      +  H + +P
Sbjct: 200 TNAMG--MPDQASQKFYNFMASHKECIP 225

>pdb|3O4R|A Chain A, Crystal Structure Of Human DehydrogenaseREDUCTASE (SDR FAMILY) MEMBER 4 (Dhrs4) Length = 261

Iteration: 1
 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 59/231 (25%), Positives = 93/231 (40%), Gaps = 45/231 (19%)
Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           +A+VT +  GIGFA+ +RLA+ G  V++++R  +   +AV +L  +GL V      V   
Sbjct: 17  VALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDQAVATLQGEGLSVTGTVCHVGKA 76
Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVS--FNDIYKNTVEHAETVIRTNFYGAKLLTESLL 149
              E  V+        +DILV+NA V+  F  I   T E  +  +  N     L+T++++
Sbjct: 77  EDRERLVATAVKLHGGIDILVSNAAVNPFFGSIMDVTEEVWDKTLDINVKAPALMTKAVV 136
Query: 150 PLFRRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFLQSVKDGTW 209
           P   +    S +  I S +   S   +P                                
Sbjct: 137 PEMEKRGGGSVV--IVSSIAAFSP--SPG------------------------------- 161
Query: 210 KSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ 260
                   ++ Y VSK AL   T  LA       I VN   PG  +TS ++
Sbjct: 162 --------FSPYNVSKTALLGLTKTLAIELAPRNIRVNCLAPGLIKTSFSR 204

>pdb|2ZTM|A Chain A, T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase Length = 260

Iteration: 1
 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 60/270 (22%), Positives = 110/270 (40%), Gaps = 55/270 (20%)
Query: 29  KETIAIVTGANKGIGFALVKRLAELGLTVILT----ARDVERGQRAVESLSEKGLPVNFF 84
           K  +A+VTG+  GIG  +   LA  G  ++L     A ++E+ +  +   ++ G+ V + 
Sbjct: 3   KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLA--AQHGVKVLYD 60
Query: 85  QLDVSDPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKN-TVEHAETVIRTNFYGAKL 143
             D+S   ++   V         +DILVNNAG+    + ++   E  + ++  N      
Sbjct: 61  GADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFH 120
Query: 144 LTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFLQS 203
            T + LP  ++     RI+NI+S  G ++                               
Sbjct: 121 GTAAALPHMKKQ-GFGRIINIASAHGLVASANK--------------------------- 152
Query: 204 VKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQG 263
                          + Y  +K  +  +T V A    G+GI+ N+ CPG+ ++ + + Q 
Sbjct: 153 ---------------SAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRSPLVEKQI 197
Query: 264 SHTADEAA---DVGARLLLLHPQQLPTAKF 290
           S  A++     +  AR LL   Q  P+ +F
Sbjct: 198 SALAEKNGVDQETAARELLSEKQ--PSLQF 225

>pdb|3U0B|A Chain A, Crystal Structure Of An Oxidoreductase From Mycobacterium Smegmatis Length = 454

Iteration: 1
 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 60/231 (25%), Positives = 98/231 (42%), Gaps = 48/231 (20%)
Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           +A+VTGA +GIG  + +  A  G TV+  A DV+     ++ +++K +      LDV+  
Sbjct: 215 VAVVTGAARGIGATIAEVFARDGATVV--AIDVDGAAEDLKRVADK-VGGTALTLDVTAD 271
Query: 92  SSIEAFVSWFKSNFAA-LDILVNNAGVSFNDIYKNTVEHA-ETVIRTNFYGAKLLTESLL 149
            +++   +    +    +DILVNNAG++ + +  N  E   + VI  N    + LTE L 
Sbjct: 272 DAVDKITAHVTEHHGGKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGL- 330
Query: 150 PLFRRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFLQSVKDGTW 209
                                   V N  I               R +GL   S   G  
Sbjct: 331 ------------------------VGNGTIG-----------EGGRVIGL---SSMAGIA 352
Query: 210 KSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ 260
            ++G     T+YA +K  +      LA     +GI++N+  PGF +T MT+
Sbjct: 353 GNRG----QTNYATTKAGMIGLAEALAPVLADKGITINAVAPGFIETKMTE 399

>pdb|2BEL|A Chain A, Structure Of Human 11-Beta-Hydroxysteroid Dehydrogenase In Complex With Nadp And Carbenoxolone Length = 283

Iteration: 1
 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 73/149 (48%), Gaps = 9/149 (6%)
Query: 34  IVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLP-VNFFQLDVSDPS 92
           IVTGA+KGIG  +   LA++G  V++TAR  E  Q+ V    E G    ++    + D +
Sbjct: 35  IVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMT 94
Query: 93  SIEAFVSWFKSNFAALDILVNN--AGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLP 150
             E FV+        LD+L+ N     S N ++ + + H    +  NF    +LT + LP
Sbjct: 95  FAEQFVAQAGKLMGGLDMLILNHITNTSLN-LFHDDIHHVRKSMEVNFLSYVVLTVAALP 153
Query: 151 LFRRSPSKSRILNISSRLGTLSKVRNPNI 179
           + ++  S   I+ +SS  G   KV  P +
Sbjct: 154 MLKQ--SNGSIVVVSSLAG---KVAYPMV 177

>pdb|3CH6|A Chain A, Crystal Structure Of 11beta-Hsd1 Double Mutant (L262r, F278e) Complexed With (3,3-Dimethylpiperidin-1-Yl)(6-(3- Fluoro-4-Methylphenyl)pyridin-2-Yl)methanone Length = 286

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 71/142 (50%), Gaps = 6/142 (4%)
Query: 34  IVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLP-VNFFQLDVSDPS 92
           IVTGA+KGIG  +   LA++G  V++TAR  E  Q+ V    E G    ++    + D +
Sbjct: 32  IVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMT 91
Query: 93  SIEAFVSWFKSNFAALDILVNN--AGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLP 150
             E FV+        LD+L+ N     S N ++ + + H    +  NF    +LT + LP
Sbjct: 92  FAEQFVAQAGKLMGGLDMLILNHITNTSLN-LFHDDIHHVRKSMEVNFLSYVVLTVAALP 150
Query: 151 LFRRSPSKSRILNISSRLGTLS 172
           + ++  S   I+ +SS  G ++
Sbjct: 151 MLKQ--SNGSIVVVSSLAGKVA 170

>pdb|2ILT|A Chain A, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With Nadp And Adamantane Sulfone Inhibitor Length = 275

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 73/149 (48%), Gaps = 9/149 (6%)
Query: 34  IVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLP-VNFFQLDVSDPS 92
           IVTGA+KGIG  +   LA++G  V++TAR  E  Q+ V    E G    ++    + D +
Sbjct: 28  IVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMT 87
Query: 93  SIEAFVSWFKSNFAALDILVNN--AGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLP 150
             E FV+        LD+L+ N     S N ++ + + H    +  NF    +LT + LP
Sbjct: 88  FAEQFVAQAGKLMGGLDMLILNHITNTSLN-LFHDDIHHVRKSMEVNFLSYVVLTVAALP 146
Query: 151 LFRRSPSKSRILNISSRLGTLSKVRNPNI 179
           + ++  S   I+ +SS  G   KV  P +
Sbjct: 147 MLKQ--SNGSIVVVSSLAG---KVAYPMV 170

>pdb|2ZTU|A Chain A, T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase Complexed With Nad+ Length = 260

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 60/270 (22%), Positives = 109/270 (40%), Gaps = 55/270 (20%)
Query: 29  KETIAIVTGANKGIGFALVKRLAELGLTVILT----ARDVERGQRAVESLSEKGLPVNFF 84
           K  +A+VTG+  GIG  +   LA  G  ++L     A ++E+ +  +   ++ G+ V + 
Sbjct: 3   KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLA--AQHGVKVLYD 60
Query: 85  QLDVSDPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKN-TVEHAETVIRTNFYGAKL 143
             D+S   ++   V         +DILVNNAG+    + ++   E  + ++  N      
Sbjct: 61  GADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFH 120
Query: 144 LTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFLQS 203
            T + LP  ++     RI+NI+S  G ++                               
Sbjct: 121 GTAAALPHMKKQ-GFGRIINIASAHGLVASANK--------------------------- 152
Query: 204 VKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQG 263
                          + Y  +K  +  +T V A    G+GI+ N+ CPG+ +  + + Q 
Sbjct: 153 ---------------SAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRAPLVEKQI 197
Query: 264 SHTADEAA---DVGARLLLLHPQQLPTAKF 290
           S  A++     +  AR LL   Q  P+ +F
Sbjct: 198 SALAEKNGVDQETAARELLSEKQ--PSLQF 225

>pdb|2IRW|A Chain A, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With Nadp And Adamantane Ether Inhibitor Length = 264

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 73/149 (48%), Gaps = 9/149 (6%)
Query: 34  IVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLP-VNFFQLDVSDPS 92
           IVTGA+KGIG  +   LA++G  V++TAR  E  Q+ V    E G    ++    + D +
Sbjct: 13  IVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMT 72
Query: 93  SIEAFVSWFKSNFAALDILVNN--AGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLP 150
             E FV+        LD+L+ N     S N ++ + + H    +  NF    +LT + LP
Sbjct: 73  FAEQFVAQAGKLMGGLDMLILNHITNTSLN-LFHDDIHHVRKSMEVNFLSYVVLTVAALP 131
Query: 151 LFRRSPSKSRILNISSRLGTLSKVRNPNI 179
           + ++  S   I+ +SS  G   KV  P +
Sbjct: 132 MLKQ--SNGSIVVVSSLAG---KVAYPMV 155

>pdb|1XU7|A Chain A, Crystal Structure Of The Interface Open Conformation Of Tetrameric 11b-hsd1 Length = 286

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 71/142 (50%), Gaps = 6/142 (4%)
Query: 34  IVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLP-VNFFQLDVSDPS 92
           IVTGA+KGIG  +   LA++G  V++TAR  E  Q+ V    E G    ++    + D +
Sbjct: 32  IVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMT 91
Query: 93  SIEAFVSWFKSNFAALDILVNN--AGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLP 150
             E FV+        LD+L+ N     S N ++ + + H    +  NF    +LT + LP
Sbjct: 92  FAEQFVAQAGKLMGGLDMLILNHITNTSLN-LFHDDIHHVRKSMEVNFLSYVVLTVAALP 150
Query: 151 LFRRSPSKSRILNISSRLGTLS 172
           + ++  S   I+ +SS  G ++
Sbjct: 151 MLKQ--SNGSIVVVSSLAGKVA 170

>pdb|4HFR|A Chain A, Human 11beta-Hydroxysteroid Dehydrogenase Type 1 In Complex With An Orally Bioavailable Acidic Inhibitor Azd4017. Length = 272

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 71/142 (50%), Gaps = 6/142 (4%)
Query: 34  IVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLP-VNFFQLDVSDPS 92
           IVTGA+KGIG  +   LA++G  V++TAR  E  Q+ V    E G    ++    + D +
Sbjct: 18  IVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMT 77
Query: 93  SIEAFVSWFKSNFAALDILVNN--AGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLP 150
             E FV+        LD+L+ N     S N ++ + + H    +  NF    +LT + LP
Sbjct: 78  FAEQFVAQAGKLMGGLDMLILNHITNTSLN-LFHDDIHHVRKSMEVNFLSYVVLTVAALP 136
Query: 151 LFRRSPSKSRILNISSRLGTLS 172
           + ++  S   I+ +SS  G ++
Sbjct: 137 MLKQ--SNGSIVVVSSLAGKVA 156

>pdb|2RBE|A Chain A, The Discovery Of 2-Anilinothiazolones As 11beta-Hsd1 Inhibitors Length = 275

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 73/149 (48%), Gaps = 9/149 (6%)
Query: 34  IVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLP-VNFFQLDVSDPS 92
           IVTGA+KGIG  +   LA++G  V++TAR  E  Q+ V    E G    ++    + D +
Sbjct: 21  IVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMT 80
Query: 93  SIEAFVSWFKSNFAALDILVNN--AGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLP 150
             E FV+        LD+L+ N     S N ++ + + H    +  NF    +LT + LP
Sbjct: 81  FAEQFVAQAGKLMGGLDMLILNHITNTSLN-LFHDDIHHVRKSMEVNFLSYVVLTVAALP 139
Query: 151 LFRRSPSKSRILNISSRLGTLSKVRNPNI 179
           + ++  S   I+ +SS  G   KV  P +
Sbjct: 140 MLKQ--SNGSIVVVSSLAG---KVAYPMV 163

>pdb|3PDJ|A Chain A, Crystal Structure Of Human 11-Beta-Hydroxysteroid Dehydrogenase 1 (11b-Hsd1) In Complex With 4,4-Disubstituted Cyclohexylbenzamide Inhibitor Length = 273

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 71/142 (50%), Gaps = 6/142 (4%)
Query: 34  IVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLP-VNFFQLDVSDPS 92
           IVTGA+KGIG  +   LA++G  V++TAR  E  Q+ V    E G    ++    + D +
Sbjct: 19  IVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMT 78
Query: 93  SIEAFVSWFKSNFAALDILVNN--AGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLP 150
             E FV+        LD+L+ N     S N ++ + + H    +  NF    +LT + LP
Sbjct: 79  FAEQFVAQAGKLMGGLDMLILNHITNTSLN-LFHDDIHHVRKSMEVNFLSYVVLTVAALP 137
Query: 151 LFRRSPSKSRILNISSRLGTLS 172
           + ++  S   I+ +SS  G ++
Sbjct: 138 MLKQ--SNGSIVVVSSLAGKVA 157

>pdb|4BB6|A Chain A, Free-Wilson And Structural Approaches To Co-Optimising Human And Rodent Isoform Potency For 11b-Hydroxysteroid Dehydrogenase Type 1 11b-Hsd1 Inhibitors Length = 292

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 71/142 (50%), Gaps = 6/142 (4%)
Query: 34  IVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLP-VNFFQLDVSDPS 92
           IVTGA+KGIG  +   LA++G  V++TAR  E  Q+ V    E G    ++    + D +
Sbjct: 38  IVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMT 97
Query: 93  SIEAFVSWFKSNFAALDILVNN--AGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLP 150
             E FV+        LD+L+ N     S N ++ + + H    +  NF    +LT + LP
Sbjct: 98  FAEQFVAQAGKLMGGLDMLILNHITNTSLN-LFHDDIHHVRKSMEVNFLSYVVLTVAALP 156
Query: 151 LFRRSPSKSRILNISSRLGTLS 172
           + ++  S   I+ +SS  G ++
Sbjct: 157 MLKQ--SNGSIVVVSSLAGKVA 176

>pdb|3D5Q|A Chain A, Crystal Structure Of 11b-Hsd1 In Complex With Triazole Inhibitor Length = 272

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 71/142 (50%), Gaps = 6/142 (4%)
Query: 34  IVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLP-VNFFQLDVSDPS 92
           IVTGA+KGIG  +   LA++G  V++TAR  E  Q+ V    E G    ++    + D +
Sbjct: 18  IVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMT 77
Query: 93  SIEAFVSWFKSNFAALDILVNN--AGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLP 150
             E FV+        LD+L+ N     S N ++ + + H    +  NF    +LT + LP
Sbjct: 78  FAEQFVAQAGKLMGGLDMLILNHITNTSLN-LFHDDIHHVRKSMEVNFLSYVVLTVAALP 136
Query: 151 LFRRSPSKSRILNISSRLGTLS 172
           + ++  S   I+ +SS  G ++
Sbjct: 137 MLKQ--SNGSIVVVSSLAGKVA 156

>pdb|4BB5|A Chain A, Free-Wilson And Structural Approaches To Co-Optimising Human And Rodent Isoform Potency For 11b-Hydroxysteroid Dehydrogenase Type 1 11b-Hsd1 Inhibitors Length = 292

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 71/142 (50%), Gaps = 6/142 (4%)
Query: 34  IVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLP-VNFFQLDVSDPS 92
           IVTGA+KGIG  +   LA++G  V++TAR  E  Q+ V    E G    ++    + D +
Sbjct: 38  IVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMT 97
Query: 93  SIEAFVSWFKSNFAALDILVNN--AGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLP 150
             E FV+        LD+L+ N     S N ++ + + H    +  NF    +LT + LP
Sbjct: 98  FAEQFVAQAGKLMGGLDMLILNHITNTSLN-LFHDDIHHVRKSMEVNFLSYVVLTVAALP 156
Query: 151 LFRRSPSKSRILNISSRLGTLS 172
           + ++  S   I+ +SS  G ++
Sbjct: 157 MLKQ--SNGSIVVVSSLAGKVA 176

>pdb|3CTM|A Chain A, Crystal Structure Of A Carbonyl Reductase From Candida Parapsilosis With Anti-Prelog Stereo-Specificity Length = 279

Iteration: 1
 Score = 59.3 bits (142), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 36/154 (23%), Positives = 79/154 (51%), Gaps = 5/154 (3%)
Query: 29  KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDV 88
           K  +A VTG++ GIG+A+ +  A+ G  V +        ++A       G+    ++ ++
Sbjct: 33  KGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNI 92
Query: 89  SDPSSIEAFVSWFKSNFAALDILVNNAGVSFN---DIYKNTVEHAETVIRTNFYGAKLLT 145
           SDP S+E  +S  + +F  +D+ V NAGV++    +I  +  +    +I  +  G    +
Sbjct: 93  SDPKSVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCS 152
Query: 146 ESLLPLFRRSPSKSRIL--NISSRLGTLSKVRNP 177
            ++  +F+++   S I+  +IS ++  + +++ P
Sbjct: 153 HNIGKIFKKNGKGSLIITSSISGKIVNIPQLQAP 186

>pdb|1NXQ|A Chain A, Crystal Structure Of R-Alcohol Dehydrogenase (Radh) (Apoenyzme) From Lactobacillus Brevis Length = 251

Iteration: 1
 Score = 59.3 bits (142), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 66/141 (46%), Gaps = 6/141 (4%)
Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLP--VNFFQLDVS 89
           +AI+TG   GIG A+  +  E G  V++T R  + G++A +S+   G P  + FFQ D S
Sbjct: 8   VAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSV---GTPDQIQFFQHDSS 64
Query: 90  DPSSIEAFVSWFKSNFAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESL 148
           D           +  F  +  LVNNAG++ N  + + T      ++  N  G    T   
Sbjct: 65  DEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLG 124
Query: 149 LPLFRRSPSKSRILNISSRLG 169
           +   +     + I+N+SS  G
Sbjct: 125 IQRMKNKGLGASIINMSSIEG 145

>pdb|4ESO|A Chain A, Crystal Structure Of A Putative Oxidoreductase Protein From Sinorhizobium Meliloti 1021 In Complex With Nadp Length = 255

Iteration: 1
 Score = 59.3 bits (142), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 68/241 (28%), Positives = 92/241 (38%), Gaps = 50/241 (20%)
Query: 33  AIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPS 92
           AIV G   G G A V+RL E G  V+LT R+     R  E   E G  V+  + D++D +
Sbjct: 11  AIVIGGTHGXGLATVRRLVEGGAEVLLTGRNESNIARIRE---EFGPRVHALRSDIADLN 67
Query: 93  SIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHA-ETVIRTNFYGAKLLTESLLPL 151
            I    +       A+D+L  NAGVS  + +    E + +     N  GA    + L PL
Sbjct: 68  EIAVLGAAAGQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPL 127
Query: 152 FRRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFLQSVKDGTWKS 211
            R   S                                         +F  SV D     
Sbjct: 128 IREGGSI----------------------------------------VFTSSVAD----- 142
Query: 212 QGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTADEAA 271
           +G     + Y+ SK AL ++  VLA      GI VNS  PGF  T  T+G    T  E A
Sbjct: 143 EGGHPGXSVYSASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTP-TKGVAGITEAERA 201
Query: 272 D 272
           +
Sbjct: 202 E 202

>pdb|3VC7|A Chain A, Crystal Structure Of A Putative Oxidoreductase From Sinorhizobium Meliloti 1021 Length = 254

Iteration: 1
 Score = 59.3 bits (142), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 68/241 (28%), Positives = 92/241 (38%), Gaps = 50/241 (20%)
Query: 33  AIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPS 92
           AIV G   G G A V+RL E G  V+LT R+     R  E   E G  V+  + D++D +
Sbjct: 10  AIVIGGTHGXGLATVRRLVEGGAEVLLTGRNESNIARIRE---EFGPRVHALRSDIADLN 66
Query: 93  SIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHA-ETVIRTNFYGAKLLTESLLPL 151
            I    +       A+D+L  NAGVS  + +    E + +     N  GA    + L PL
Sbjct: 67  EIAVLGAAAGQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPL 126
Query: 152 FRRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFLQSVKDGTWKS 211
            R   S                                         +F  SV D     
Sbjct: 127 IREGGSI----------------------------------------VFTSSVAD----- 141
Query: 212 QGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTADEAA 271
           +G     + Y+ SK AL ++  VLA      GI VNS  PGF  T  T+G    T  E A
Sbjct: 142 EGGHPGXSVYSASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTP-TKGVAGITEAERA 200
Query: 272 D 272
           +
Sbjct: 201 E 201

>pdb|3EZL|A Chain A, Crystal Structure Of Acetyacetyl-Coa Reductase From Burkholderia Pseudomallei 1710b Length = 256

Iteration: 1
 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 104/236 (44%), Gaps = 51/236 (21%)
Query: 30  ETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESL-SEKGLPVNFF--QL 86
           + IA VTG   GIG ++ +RL + G  V+  A       R V+ L  +K L  +F+  + 
Sbjct: 13  QRIAYVTGGMGGIGTSICQRLHKDGFRVV--AGCGPNSPRRVKWLEDQKALGFDFYASEG 70
Query: 87  DVSDPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIY-KNTVEHAETVIRTNFYGAKLLT 145
           +V D  S +      K+    +D+LVNNAG++ + ++ K T E  + VI TN      +T
Sbjct: 71  NVGDWDSTKQAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVT 130
Query: 146 ESLLP-LFRRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFLQSV 204
           + ++  +  R     RI+NISS  G                            G F Q  
Sbjct: 131 KQVIDGMVER--GWGRIINISSVNGQK--------------------------GQFGQ-- 160
Query: 205 KDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ 260
                         T+Y+ +K  ++ +TM LA+    +G++VN+  PG+  T M +
Sbjct: 161 --------------TNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVK 202

>pdb|4DML|A Chain A, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Synechococcus Elongatus Pcc 7942 Length = 269

Iteration: 1
 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 59/232 (25%), Positives = 97/232 (41%), Gaps = 45/232 (19%)
Query: 30  ETIAIVTGANKGIGFALVKRLAELGLTVILT-ARDVERGQRAVESLSEKGLPVNFFQLDV 88
           + IA+VTGA++GIG A+   LA  G  V +  A         V +++  G      + DV
Sbjct: 28  DRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADV 87
Query: 89  SDPSSIEAFVSWFKSNFAALDILVNNAGVSFND-IYKNTVEHAETVIRTNFYGAKLLTES 147
           S  S +EA  +     +  LD+LVNNAG++ +  + +   +  ++V+  N  G  L + +
Sbjct: 88  SQESEVEALFAAVIERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRA 147
Query: 148 LLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFLQSVKDG 207
              +  +  S  RI+NI+S +G +    NP                              
Sbjct: 148 AAKIMLKQRS-GRIINIASVVGEMG---NPG----------------------------- 174
Query: 208 TWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMT 259
                       +Y+ +K  +   T  +AK     GI+VN+  PGF  T MT
Sbjct: 175 ----------QANYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMT 216

>pdb|3SJU|A Chain A, Hedamycin Polyketide Ketoreductase Bound To Nadph Length = 279

Iteration: 1
 Score = 58.5 bits (140), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 60/235 (25%), Positives = 90/235 (38%), Gaps = 44/235 (18%)
Query: 28  SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLD 87
           S+   A VTG + GIG A+ + LA  G+ V   ARD +    AV+ L   G  V+    D
Sbjct: 22  SRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCD 81
Query: 88  VSDPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHA-ETVIRTNFYGA-KLLT 145
           V+    + A V+     F  + ILVN+AG +      +  +     V+ TN  G  ++  
Sbjct: 82  VTSTDEVHAAVAAAVERFGPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTR 141
Query: 146 ESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFLQSVK 205
           E L     R     RI+NI+S  G                                   K
Sbjct: 142 EVLRAGGMREAGWGRIVNIASTGG-----------------------------------K 166
Query: 206 DGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ 260
            G   +         Y  SK  +  +T  +       GI+VN+ CPG+ +T M +
Sbjct: 167 QGVMYA-------APYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAE 214

>pdb|1ZJY|A Chain A, Structure Of R-Specific Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus Brevis In Complex With Phenylethanol And Nadh Length = 251

Iteration: 1
 Score = 58.5 bits (140), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 66/141 (46%), Gaps = 6/141 (4%)
Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLP--VNFFQLDVS 89
           +AI+TG   GIG A+  +  E G  V++T R  + G++A +S+   G P  + FFQ D S
Sbjct: 8   VAIITGGTLGIGLAIATKFVEEGAKVMITDRHSDVGEKAAKSV---GTPDQIQFFQHDSS 64
Query: 90  DPSSIEAFVSWFKSNFAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESL 148
           D           +  F  +  LVNNAG++ N  + + T      ++  N  G    T   
Sbjct: 65  DEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLG 124
Query: 149 LPLFRRSPSKSRILNISSRLG 169
           +   +     + I+N+SS  G
Sbjct: 125 IQRMKNKGLGASIINMSSIEG 145

>pdb|3KVO|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Hydroxysteroid Dehydrogenase Like 2 (Hsdl2) Length = 346

Iteration: 1
 Score = 58.2 bits (139), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 69/145 (47%), Gaps = 15/145 (10%)
Query: 35  VTGANKGIGFALVKRLAELGLTVILTARDVE----------RGQRAVESLSEKGLPVNFF 84
           +TGA++GIG A+  + A+ G  +++ A+  +               +E++  K LP    
Sbjct: 50  ITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPC--- 106
Query: 85  QLDVSDPSSIEAFVSWFKSNFAALDILVNNA-GVSFNDIYKNTVEHAETVIRTNFYGAKL 143
            +DV D   I A V      F  +DILVNNA  +S  +      +  + ++  N  G  L
Sbjct: 107 IVDVRDEQQISAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYL 166
Query: 144 LTESLLPLFRRSPSKSRILNISSRL 168
            +++ +P  ++S   + ILNIS  L
Sbjct: 167 ASKACIPYLKKS-KVAHILNISPPL 190

>pdb|3V2H|A Chain A, The Crystal Structure Of D-Beta-Hydroxybutyrate Dehydrogenase From Sinorhizobium Meliloti Length = 281

Iteration: 1
 Score = 58.2 bits (139), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 57/233 (24%), Positives = 86/233 (36%), Gaps = 46/233 (19%)
Query: 33  AIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAV--ESLSEKGLPVNFFQLDVSD 90
           A++TG+  GIG A+ + LA+ G  ++L         R V  E        V     D + 
Sbjct: 28  AVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADXTK 87
Query: 91  PSSIEAFVSWFKSNFAALDILVNNAGVSF-NDIYKNTVEHAETVIRTNFYGAKLLTESLL 149
           PS I    +     F   DILVNNAGV F   I    VE  + +I  N   +       +
Sbjct: 88  PSEIADXXAXVADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAI 147
Query: 150 PLFRRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFLQSVKDGTW 209
           P  ++     RI+NI+S  G ++                                    +
Sbjct: 148 PPXKKK-GWGRIINIASAHGLVAS----------------------------------PF 172
Query: 210 KSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ 262
           KS         Y  +K  +   T  +A      G++VNS CPG+  T + + Q
Sbjct: 173 KSA--------YVAAKHGIXGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQ 217

>pdb|2GDZ|A Chain A, Crystal Structure Of 15-Hydroxyprostaglandin Dehydrogenase Type1, Complexed With Nad+ Length = 267

Iteration: 1
 Score = 58.2 bits (139), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 57/234 (24%), Positives = 93/234 (39%), Gaps = 53/234 (22%)
Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVN--FFQLDVS 89
           +A+VTGA +GIG A  + L   G  V L   ++E G +   +L E+  P    F Q DV+
Sbjct: 9   VALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVA 68
Query: 90  DPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVE-HAETVIRTNFYGAKLLTESL 148
           D   +         +F  LDILVNNAGV+    ++ T++ +  +VI   + G   +++  
Sbjct: 69  DQQQLRDTFRKVVDHFGRLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSK-- 126
Query: 149 LPLFRRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFLQSVKDGT 208
               +       I+N+SS  G +   + P                               
Sbjct: 127 ----QNGGEGGIIINMSSLAGLMPVAQQP------------------------------- 151
Query: 209 WKSQGWPEIWTDYAVSKLALNAYT--MVLAKRYEGEGISVNSYCPGFTQTSMTQ 260
                       Y  SK  +  +T    LA      G+ +N+ CPGF  T++ +
Sbjct: 152 -----------VYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILE 194

>pdb|1XG5|A Chain A, Structure Of Human Putative Dehydrogenase Mgc4172 In Complex With Nadp Length = 279

Iteration: 1
 Score = 57.8 bits (138), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 40/149 (26%), Positives = 72/149 (48%), Gaps = 6/149 (4%)
Query: 25  KWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNF- 83
           +W  ++ +A+VTGA+ GIG A+ + L + GL V+  AR V   +         G P    
Sbjct: 29  RW--RDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLI 86
Query: 84  -FQLDVSDPSSIEAFVSWFKSNFAALDILVNNAGVSFND-IYKNTVEHAETVIRTNFYGA 141
            ++ D+S+   I +  S  +S  + +DI +NNAG++  D +   +    + +   N    
Sbjct: 87  PYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLAL 146
Query: 142 KLLT-ESLLPLFRRSPSKSRILNISSRLG 169
            + T E+   +  R+     I+NI+S  G
Sbjct: 147 SICTREAYQSMKERNVDDGHIININSMSG 175

>pdb|1YO6|A Chain A, Crystal Structure Of The Putative Carbonyl Reductase Sniffer Of Caenorhabditis Elegans Length = 250

Iteration: 1
 Score = 57.8 bits (138), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 69/258 (26%), Positives = 110/258 (42%), Gaps = 64/258 (24%)
Query: 34  IVTGANKGIGFALVKRLAELG--LTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           +VTGAN+GIG  LV++L +      +I TARDVE   +A E  S K   V+   L V+  
Sbjct: 7   VVTGANRGIGLGLVQQLVKDKNIRHIIATARDVE---KATELKSIKDSRVHVLPLTVTCD 63
Query: 92  SSIEAFVSWFKSNFAA--LDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLL 149
            S++ FVS       +  L +L+NNAGV  +  Y    E    VI        + T S++
Sbjct: 64  KSLDTFVSKVGEIVGSDGLSLLINNAGVLLS--YGTNTEPNRAVIAEQL---DVNTTSVV 118
Query: 150 PLF-----------------RRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXX 192
            L                  + S S++ ++ ISS LG                       
Sbjct: 119 LLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLG----------------------- 155
Query: 193 XXRFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPG 252
                     S+ D T  S  +P +   Y +SK A+N +   LA   + + + V ++CPG
Sbjct: 156 ----------SITDNTSGSAQFPVLA--YRMSKAAINMFGRTLAVDLKDDNVLVVNFCPG 203
Query: 253 FTQTSMTQGQGSHTADEA 270
           + QT++     + T +++
Sbjct: 204 WVQTNLGGKNAALTVEQS 221

>pdb|3LF1|A Chain A, Apo Structure Of The Short Chain Oxidoreductase Q9hya2 From Pseudomonas Aeruginosa Pao1 Containing An Atypical Catalytic Center Length = 265

Iteration: 1
 Score = 57.8 bits (138), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 43/144 (29%), Positives = 65/144 (45%), Gaps = 4/144 (2%)
Query: 30  ETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQ--LD 87
           E +A+VTG + GIG A V+ L E G  V   ARD ER + A  +L ++      F    D
Sbjct: 8   EAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCD 67
Query: 88  VSDPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHA-ETVIRTNFYGAKLLTE 146
           V D   + AF    +       ILVNNAG      +  T + A    ++  F+       
Sbjct: 68  VLDALQVRAFAEACERTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVR 127
Query: 147 SLLPLFRRSPSKSRILNISSRLGT 170
           + LP    S + + I+ ++S L +
Sbjct: 128 AFLPQL-ESRADAAIVCVNSLLAS 150

>pdb|3LLS|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Mycobacterium Tuberculosis Length = 475

Iteration: 1
 Score = 57.8 bits (138), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 64/232 (27%), Positives = 96/232 (41%), Gaps = 52/232 (22%)
Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQ--LDVS 89
           +AIVTGA +GIG  + +  A  G  V+  A DVE    A E+L+E    V      LDV+
Sbjct: 236 VAIVTGAARGIGATIAEVFARDGAHVV--AIDVE---SAAENLAETASKVGGTALWLDVT 290
Query: 90  DPSSIEAFVSWFKSNFAA-LDILVNNAGVSFNDIYKNTVEHA-ETVIRTNFYGAKLLTES 147
              +++      + +     DILVNNAG++ + +  N  +   + V+  N      LTE 
Sbjct: 291 ADDAVDKISEHLRDHHGGKADILVNNAGITRDKLLANMDDARWDAVLAVNLLAPLRLTEG 350
Query: 148 LLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFLQSVKDG 207
           L                         V N +I               R +GL   S   G
Sbjct: 351 L-------------------------VGNGSIG-----------EGGRVIGL---SSIAG 371
Query: 208 TWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMT 259
              ++G     T+YA +K  +   T  LA     +GI++N+  PGF +T MT
Sbjct: 372 IAGNRG----QTNYATTKAGMIGITQALAPGLAAKGITINAVAPGFIETQMT 419

>pdb|3V1T|C Chain C, Crystal Structure Of A Putative Ketoacyl Reductase (Fabg4) From Mycobacterium Tuberculosis H37rv At 1.9 Angstrom Resolution Length = 462

Iteration: 1
 Score = 57.8 bits (138), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 64/232 (27%), Positives = 96/232 (41%), Gaps = 52/232 (22%)
Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQ--LDVS 89
           +AIVTGA +GIG  + +  A  G  V+  A DVE    A E+L+E    V      LDV+
Sbjct: 223 VAIVTGAARGIGATIAEVFARDGAHVV--AIDVE---SAAENLAETASKVGGTALWLDVT 277
Query: 90  DPSSIEAFVSWFKSNFAA-LDILVNNAGVSFNDIYKNTVEHA-ETVIRTNFYGAKLLTES 147
              +++      + +     DILVNNAG++ + +  N  +   + V+  N      LTE 
Sbjct: 278 ADDAVDKISEHLRDHHGGKADILVNNAGITRDKLLANMDDARWDAVLAVNLLAPLRLTEG 337
Query: 148 LLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFLQSVKDG 207
           L                         V N +I               R +GL   S   G
Sbjct: 338 L-------------------------VGNGSIG-----------EGGRVIGL---SSIAG 358
Query: 208 TWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMT 259
              ++G     T+YA +K  +   T  LA     +GI++N+  PGF +T MT
Sbjct: 359 IAGNRG----QTNYATTKAGMIGITQALAPGLAAKGITINAVAPGFIETQMT 406

>pdb|3Q6I|A Chain A, Crystal Structure Of Fabg4 And Coenzyme Binary Complex Length = 446

Iteration: 1
 Score = 57.4 bits (137), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 64/232 (27%), Positives = 96/232 (41%), Gaps = 52/232 (22%)
Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQ--LDVS 89
           +AIVTGA +GIG  + +  A  G  V+  A DVE    A E+L+E    V      LDV+
Sbjct: 207 VAIVTGAARGIGATIAEVFARDGAHVV--AIDVE---SAAENLAETASKVGGTALWLDVT 261
Query: 90  DPSSIEAFVSWFKSNFAA-LDILVNNAGVSFNDIYKNTVEHA-ETVIRTNFYGAKLLTES 147
              +++      + +     DILVNNAG++ + +  N  +   + V+  N      LTE 
Sbjct: 262 ADDAVDKISEHLRDHHGGKADILVNNAGITRDKLLANMDDARWDAVLAVNLLAPLRLTEG 321
Query: 148 LLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFLQSVKDG 207
           L                         V N +I               R +GL   S   G
Sbjct: 322 L-------------------------VGNGSIG-----------EGGRVIGL---SSIAG 342
Query: 208 TWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMT 259
              ++G     T+YA +K  +   T  LA     +GI++N+  PGF +T MT
Sbjct: 343 IAGNRG----QTNYATTKAGMIGITQALAPGLAAKGITINAVAPGFIETQMT 390

>pdb|4FW8|A Chain A, Crystal Structure Of Fabg4 Complexed With Coenzyme Nadh Length = 454

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 64/232 (27%), Positives = 96/232 (41%), Gaps = 52/232 (22%)
Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQ--LDVS 89
           +AIVTGA +GIG  + +  A  G  V+  A DVE    A E+L+E    V      LDV+
Sbjct: 215 VAIVTGAARGIGATIAEVFARDGAHVV--AIDVE---SAAENLAETASKVGGTALWLDVT 269
Query: 90  DPSSIEAFVSWFKSNFAA-LDILVNNAGVSFNDIYKNTVEHA-ETVIRTNFYGAKLLTES 147
              +++      + +     DILVNNAG++ + +  N  +   + V+  N      LTE 
Sbjct: 270 ADDAVDKISEHLRDHHGGKADILVNNAGITRDKLLANMDDARWDAVLAVNLLAPLRLTEG 329
Query: 148 LLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFLQSVKDG 207
           L                         V N +I               R +GL   S   G
Sbjct: 330 L-------------------------VGNGSIG-----------EGGRVIGL---SSIAG 350
Query: 208 TWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMT 259
              ++G     T+YA +K  +   T  LA     +GI++N+  PGF +T MT
Sbjct: 351 IAGNRG----QTNYATTKAGMIGITQALAPGLAAKGITINAVAPGFIETQMT 398

>pdb|3ICC|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis At 1.87 A Resolution Length = 255

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 60/241 (24%), Positives = 91/241 (37%), Gaps = 63/241 (26%)
Query: 29  KETIAIVTGANKGIGFALVKRLAELG-LTVILTARDVERGQRAVESLSEKGLPVNFFQLD 87
           K  +A+VTGA++GIG A+ KRLA  G L  I      E  +  V  +   G        +
Sbjct: 6   KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGAN 65
Query: 88  VSDPSSIEAFVSWF------KSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGA 141
           +     +EA  S        ++     DIL+NNAG+      + T E         F+  
Sbjct: 66  LESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQ--------FFDR 117
Query: 142 KLLTESLLPLF------RRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXR 195
            +   +  P F       R    SRI+NISS     +++  P+                 
Sbjct: 118 XVSVNAKAPFFIIQQALSRLRDNSRIINISS---AATRISLPD----------------- 157
Query: 196 FVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQ 255
                                 +  Y+ +K A+N  T  LAK+    GI+VN+  PGF +
Sbjct: 158 ----------------------FIAYSXTKGAINTXTFTLAKQLGARGITVNAILPGFVK 195
Query: 256 T 256
           T
Sbjct: 196 T 196

>pdb|3M1L|A Chain A, Crystal Strucutre Of A C-Terminal Trunacted Mutant Of A Putative Ketoacyl Reductase (Fabg4) From Mycobacterium Tuberculosis H37rv At 2.5 Angstrom Resolution Length = 432

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 64/232 (27%), Positives = 96/232 (41%), Gaps = 52/232 (22%)
Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQ--LDVS 89
           +AIVTGA +GIG  + +  A  G  V+  A DVE    A E+L+E    V      LDV+
Sbjct: 199 VAIVTGAARGIGATIAEVFARDGAHVV--AIDVE---SAAENLAETASKVGGTALWLDVT 253
Query: 90  DPSSIEAFVSWFKSNFAA-LDILVNNAGVSFNDIYKNTVEHA-ETVIRTNFYGAKLLTES 147
              +++      + +     DILVNNAG++ + +  N  +   + V+  N      LTE 
Sbjct: 254 ADDAVDKISEHLRDHHGGKADILVNNAGITRDKLLANMDDARWDAVLAVNLLAPLRLTEG 313
Query: 148 LLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFLQSVKDG 207
           L                         V N +I               R +GL   S   G
Sbjct: 314 L-------------------------VGNGSIG-----------EGGRVIGL---SSIAG 334
Query: 208 TWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMT 259
              ++G     T+YA +K  +   T  LA     +GI++N+  PGF +T MT
Sbjct: 335 IAGNRG----QTNYATTKAGMIGITQALAPGLAAKGITINAVAPGFIETQMT 382

>pdb|3TFO|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Carrier-Protein) Reductase From Sinorhizobium Meliloti Length = 264

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 44/146 (30%), Positives = 71/146 (48%), Gaps = 3/146 (2%)
Query: 30  ETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVS 89
           + + ++TGA+ GIG  + + L   G  ++L AR   R +     + + G       LDV+
Sbjct: 4   DKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVT 63
Query: 90  DPSSIEAFVSWFKSNFAALDILVNNAGV-SFNDIYKNTVEHAETVIRTNFYGAKLLTESL 148
           D  S+ AF       +  +D+LVNNAGV   + +    V+  E +I  N  G      ++
Sbjct: 64  DRHSVAAFAQAAVDTWGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAV 123
Query: 149 LPLFRRSPSKSRILNISSRLGTLSKV 174
           LP+     S  +I+NI S +G LS V
Sbjct: 124 LPIMEAQRS-GQIINIGS-IGALSVV 147

>pdb|3M1A|A Chain A, The Crystal Structure Of A Short-Chain Dehydrogenase From Streptomyces Avermitilis To 2a Length = 281

Iteration: 1
 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 46/140 (32%), Positives = 71/140 (50%), Gaps = 5/140 (3%)
Query: 34  IVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSS 93
           +VTGA+ G G A+ +     G TVI TAR  E     V +  ++   ++   LDV+D   
Sbjct: 9   LVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAIS---LDVTDGER 65
Query: 94  IEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHA-ETVIRTNFYGAKLLTESLLPLF 152
           I+   +   + +  +D+LVNNAG +    ++ T E     +   + +G   LT +LLP  
Sbjct: 66  IDVVAADVLARYGRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQX 125
Query: 153 RRSPSKSRILNISSRLGTLS 172
           R   S S ++NISS  G LS
Sbjct: 126 RERGSGS-VVNISSFGGQLS 144

>pdb|2Q2Q|A Chain A, Structure Of D-3-Hydroxybutyrate Dehydrogenase From Pseudomonas Putida Length = 255

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 61/258 (23%), Positives = 100/258 (38%), Gaps = 57/258 (22%)
Query: 29  KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDV 88
           K   A+VTG+  GIG  + + LA  G  ++L          A+  ++  G+       D+
Sbjct: 3   KGKTALVTGSTSGIGLGIAQVLARAGANIVLNG--FGDPAPALAEIARHGVKAVHHPADL 60
Query: 89  SDPSSIEAFVSWFKSNFAALDILVNNAGVS-FNDIYKNTVEHAETVIRTN----FYGAKL 143
           SD + IEA  +  +  F  +DILVNNAG+     + +  +E  + +I  N    F+G +L
Sbjct: 61  SDVAQIEALFALAEREFGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRL 120
Query: 144 LTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFLQS 203
               +     R+ +  RI+NI+S  G +                                
Sbjct: 121 ALPGM-----RARNWGRIINIASVHGLVGS------------------------------ 145
Query: 204 VKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQG 263
               T K+         Y  +K  +   T V+        ++ N+ CPG+  T + Q Q 
Sbjct: 146 ----TGKAA--------YVAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPLVQKQ- 192
Query: 264 SHTADEAADVGARLLLLH 281
               D AA+ G  L   H
Sbjct: 193 --IDDRAANGGDPLQAQH 208

>pdb|3AY6|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 A258f Mutant In Complex With Nadh And D-Glucose Length = 269

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/233 (23%), Positives = 92/233 (39%), Gaps = 46/233 (19%)
Query: 29  KETIAIVTGANKGIGFALVKRLAELGLTVILTA-RDVERGQRAVESLSEKGLPVNFFQLD 87
           K+ + ++TG + G+G A+  R  +    V++    + E    A + + E G      Q D
Sbjct: 14  KDKVVVITGGSTGLGRAMAVRFGQEEAKVVINYYNNEEEALDAKKEVEEAGGQAIIVQGD 73
Query: 88  VSDPSSIEAFVSWFKSNFAALDILVNNAGVSFNDI--YKNTVEHAETVIRTNFYGAKLLT 145
           V+    +   V      F  LD+++NNAGV  N +  ++ ++++   VI TN  GA L +
Sbjct: 74  VTKEEDVVNLVQTAIKEFGTLDVMINNAGVE-NPVPSHELSLDNWNKVIDTNLTGAFLGS 132
Query: 146 ESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFLQSVK 205
              +  F  +  K  ++N+SS    +                                  
Sbjct: 133 REAIKYFVENDIKGNVINMSSVHEMIP--------------------------------- 159
Query: 206 DGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSM 258
                   WP ++  YA SK  +   T  LA  Y  +GI VN+  PG   T +
Sbjct: 160 --------WP-LFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAMNTPI 203

>pdb|3AUS|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 In Ligand-Free Form Length = 269

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/233 (23%), Positives = 92/233 (39%), Gaps = 46/233 (19%)
Query: 29  KETIAIVTGANKGIGFALVKRLAELGLTVILTA-RDVERGQRAVESLSEKGLPVNFFQLD 87
           K+ + ++TG + G+G A+  R  +    V++    + E    A + + E G      Q D
Sbjct: 14  KDKVVVITGGSTGLGRAMAVRFGQEEAKVVINYYNNEEEALDAKKEVEEAGGQAIIVQGD 73
Query: 88  VSDPSSIEAFVSWFKSNFAALDILVNNAGVSFNDI--YKNTVEHAETVIRTNFYGAKLLT 145
           V+    +   V      F  LD+++NNAGV  N +  ++ ++++   VI TN  GA L +
Sbjct: 74  VTKEEDVVNLVQTAIKEFGTLDVMINNAGVE-NPVPSHELSLDNWNKVIDTNLTGAFLGS 132
Query: 146 ESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFLQSVK 205
              +  F  +  K  ++N+SS    +                                  
Sbjct: 133 REAIKYFVENDIKGNVINMSSVHEMIP--------------------------------- 159
Query: 206 DGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSM 258
                   WP ++  YA SK  +   T  LA  Y  +GI VN+  PG   T +
Sbjct: 160 --------WP-LFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAMNTPI 203

>pdb|3GK3|A Chain A, Crystal Structure Of Acetoacetyl-Coa Reductase From Burkholderia Pseudomallei 1710b Length = 269

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 58/235 (24%), Positives = 99/235 (42%), Gaps = 53/235 (22%)
Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESL---SEKGLPVNFFQLDV 88
           +A VTG   G+G A+ +RL + G+ V ++    ER       L    + G     + +DV
Sbjct: 27  VAFVTGGMGGLGAAISRRLHDAGMAVAVSHS--ERNDHVSTWLMHERDAGRDFKAYAVDV 84
Query: 89  SDPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIY-KNTVEHAETVIRTNFYGAKLLTES 147
           +D  S E       ++F  +D+L+NNAG++ +  + K T    + V+RT+      +T+ 
Sbjct: 85  ADFESCERCAEKVLADFGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQ 144
Query: 148 LLP--LFRRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFLQSVK 205
            +   + RR     RI+NI S  G+                           G F Q+  
Sbjct: 145 FIAGMVERRF---GRIVNIGSVNGSR--------------------------GAFGQA-- 173
Query: 206 DGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ 260
                         +YA +K  ++ +T  LA      GI+VN+  PG+  T+M +
Sbjct: 174 --------------NYASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVE 214

>pdb|3AY7|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 G259a Mutant Length = 269

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/233 (23%), Positives = 92/233 (39%), Gaps = 46/233 (19%)
Query: 29  KETIAIVTGANKGIGFALVKRLAELGLTVILTA-RDVERGQRAVESLSEKGLPVNFFQLD 87
           K+ + ++TG + G+G A+  R  +    V++    + E    A + + E G      Q D
Sbjct: 14  KDKVVVITGGSTGLGRAMAVRFGQEEAKVVINYYNNEEEALDAKKEVEEAGGQAIIVQGD 73
Query: 88  VSDPSSIEAFVSWFKSNFAALDILVNNAGVSFNDI--YKNTVEHAETVIRTNFYGAKLLT 145
           V+    +   V      F  LD+++NNAGV  N +  ++ ++++   VI TN  GA L +
Sbjct: 74  VTKEEDVVNLVQTAIKEFGTLDVMINNAGVE-NPVPSHELSLDNWNKVIDTNLTGAFLGS 132
Query: 146 ESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFLQSVK 205
              +  F  +  K  ++N+SS    +                                  
Sbjct: 133 REAIKYFVENDIKGNVINMSSVHEMIP--------------------------------- 159
Query: 206 DGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSM 258
                   WP ++  YA SK  +   T  LA  Y  +GI VN+  PG   T +
Sbjct: 160 --------WP-LFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAMNTPI 203

>pdb|1UZL|A Chain A, Maba From Mycobacterium Tuberculosis Length = 247

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/230 (24%), Positives = 93/230 (40%), Gaps = 59/230 (25%)
Query: 34  IVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFF--QLDVSDP 91
           +VTG N+GIG A+ +RLA  G  V +T R               G P   F  + DV+D 
Sbjct: 19  LVTGGNRGIGLAIAQRLAADGHKVAVTHRG-------------SGAPKGLFGVECDVTDS 65
Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSFND-IYKNTVEHAETVIRTNFYGAKLLTESLLP 150
            +++   +  + +   +++LV+NAG+S +  + + T E  E VI  N  GA         
Sbjct: 66  DAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGA--------- 116
Query: 151 LFRRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFLQSVKDGTWK 210
            FR +   SR +   ++ G +                           +F+ SV  G+W 
Sbjct: 117 -FRVAQRASRSMQ-RNKFGRM---------------------------IFIGSVS-GSWG 146
Query: 211 SQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ 260
                    +YA SK  +      +A+      ++ N   PG+  T MT+
Sbjct: 147 IGN----QANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTR 192

>pdb|3RKU|A Chain A, Substrate Fingerprint And The Structure Of Nadp+ Dependent Serine Dehydrogenase From Saccharomyces Cerevisiae Complexed With Nadp+ Length = 287

Iteration: 1
 Score = 55.8 bits (133), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 80/152 (52%), Gaps = 9/152 (5%)
Query: 25  KWWSKETIAIVTGANKGIGFALVKRLAELG---LTVILTARDVERGQRAVESLSEK--GL 79
           +  +K+T+ ++TGA+ GIG A      E     + +IL AR +E+ +   +++ ++    
Sbjct: 29  ERLAKKTV-LITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNA 87
Query: 80  PVNFFQLDVSDPSSIEAFVSWFKSNFAALDILVNNAGVSF--NDIYKNTVEHAETVIRTN 137
            V+  QLD++    I+ F+      F  +DILVNNAG +   + + +   E  + V  TN
Sbjct: 88  KVHVAQLDITQAEKIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTN 147
Query: 138 FYGAKLLTESLLPLFRRSPSKSRILNISSRLG 169
                 +T+++LP+F ++ +   I+N+ S  G
Sbjct: 148 VTALINITQAVLPIF-QAKNSGDIVNLGSIAG 178

>pdb|2NTN|A Chain A, Crystal Structure Of Maba-c60v/g139a/s144l Length = 267

Iteration: 1
 Score = 55.8 bits (133), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 56/230 (24%), Positives = 93/230 (40%), Gaps = 59/230 (25%)
Query: 34  IVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFF--QLDVSDP 91
           +VTG N+GIG A+ +RLA  G  V +T R               G P   F  ++DV+D 
Sbjct: 39  LVTGGNRGIGLAIAQRLAADGHKVAVTHRG-------------SGAPKGLFGVEVDVTDS 85
Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSFND-IYKNTVEHAETVIRTNFYGAKLLTESLLP 150
            +++   +  + +   +++LV+NAG+S +  + + T E  E VI  N  GA         
Sbjct: 86  DAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGA--------- 136
Query: 151 LFRRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFLQSVKDGTWK 210
            FR +   SR +   ++ G +                           +F+ SV  G W 
Sbjct: 137 -FRVAQRASRSMQ-RNKFGRM---------------------------IFIASVS-GLWG 166
Query: 211 SQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ 260
                    +YA SK  +      +A+      ++ N   PG+  T MT+
Sbjct: 167 IGN----QANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTR 212

>pdb|1UZM|A Chain A, Maba From Mycobacterium Tuberculosis Length = 247

Iteration: 1
 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 56/230 (24%), Positives = 93/230 (40%), Gaps = 59/230 (25%)
Query: 34  IVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFF--QLDVSDP 91
           +VTG N+GIG A+ +RLA  G  V +T R               G P   F  ++DV+D 
Sbjct: 19  LVTGGNRGIGLAIAQRLAADGHKVAVTHRG-------------SGAPKGLFGVEVDVTDS 65
Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSFND-IYKNTVEHAETVIRTNFYGAKLLTESLLP 150
            +++   +  + +   +++LV+NAG+S +  + + T E  E VI  N  GA         
Sbjct: 66  DAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGA--------- 116
Query: 151 LFRRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFLQSVKDGTWK 210
            FR +   SR +   ++ G +                           +F+ SV  G W 
Sbjct: 117 -FRVAQRASRSMQ-RNKFGRM---------------------------IFIGSVS-GLWG 146
Query: 211 SQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ 260
                    +YA SK  +      +A+      ++ N   PG+  T MT+
Sbjct: 147 IGN----QANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTR 192

>pdb|2DTD|A Chain A, Structure Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (aldt) In Ligand-free Form Length = 264

Iteration: 1
 Score = 55.1 bits (131), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 69/140 (49%), Gaps = 15/140 (10%)
Query: 29  KETIAIVTGANKGIGFALVKRLAELGLTVI-LTARDVERGQRAVESLSEKGLPVNFFQLD 87
           ++ + IVTGA+ GIG A+ +R  + G  VI L+  D    +             +  + D
Sbjct: 7   RDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPGEAK------------YDHIECD 54
Query: 88  VSDPSSIEAFVSWFKSNFAALDILVNNAGV-SFNDIYKNTVEHAETVIRTNFYGAKLLTE 146
           V++P  ++A +      + ++ +LVNNAG+ S+  I   ++     +I  N +G    ++
Sbjct: 55  VTNPDQVKASIDHIFKEYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASK 114
Query: 147 SLLPLFRRSPSKSRILNISS 166
             +P   RS   S I+NISS
Sbjct: 115 FAIPYMIRSRDPS-IVNISS 133

>pdb|2ZK7|A Chain A, Structure Of A C-Terminal Deletion Mutant Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (Aldt) Length = 257

Iteration: 1
 Score = 55.1 bits (131), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 69/140 (49%), Gaps = 15/140 (10%)
Query: 29  KETIAIVTGANKGIGFALVKRLAELGLTVI-LTARDVERGQRAVESLSEKGLPVNFFQLD 87
           ++ + IVTGA+ GIG A+ +R  + G  VI L+  D    +             +  + D
Sbjct: 14  RDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPGEAK------------YDHIECD 61
Query: 88  VSDPSSIEAFVSWFKSNFAALDILVNNAGV-SFNDIYKNTVEHAETVIRTNFYGAKLLTE 146
           V++P  ++A +      + ++ +LVNNAG+ S+  I   ++     +I  N +G    ++
Sbjct: 62  VTNPDQVKASIDHIFKEYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASK 121
Query: 147 SLLPLFRRSPSKSRILNISS 166
             +P   RS   S I+NISS
Sbjct: 122 FAIPYMIRSRDPS-IVNISS 140

>pdb|4B79|A Chain A, The Aeropath Project And Pseudomonas Aeruginosa High-throughput Crystallographic Studies For Assessment Of Potential Targets In Early Stage Drug Discovery. Length = 242

Iteration: 1
 Score = 54.7 bits (130), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 59/228 (25%), Positives = 86/228 (37%), Gaps = 55/228 (24%)
Query: 34  IVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSS 93
           +VTG + GIG A+  + AELG  V+    D + G  A      +   +   +LD++D   
Sbjct: 15  LVTGGSSGIGAAIAMQFAELGAEVVALGLDAD-GVHA-----PRHPRIRREELDITDSQR 68
Query: 94  IEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFR 153
           ++            LD+LVNNAG+S  D  +  +   E V+R N   A L ++   PL  
Sbjct: 69  LQRLFEALPR----LDVLVNNAGIS-RDREEYDLATFERVLRLNLSAAMLASQLARPLL- 122
Query: 154 RSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFLQSVKDGTWKSQG 213
            +     ILNI+S   T      P                                    
Sbjct: 123 -AQRGGSILNIASMYSTFGSADRPA----------------------------------- 146
Query: 214 WPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG 261
                  Y+ SK A+   T  LA  Y  E I VN+  PG+  T +  G
Sbjct: 147 -------YSASKGAIVQLTRSLACEYAAERIRVNAIAPGWIDTPLGAG 187

>pdb|2NM0|A Chain A, Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl Carrier Protein Reductase From Streptomyces Coelicolor A3(2) Length = 253

Iteration: 1
 Score = 54.3 bits (129), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 53/231 (22%), Positives = 87/231 (37%), Gaps = 61/231 (26%)
Query: 34  IVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFF--QLDVSDP 91
           +VTG N+GIG A+ +  A+ G  V +T R  E              P  F   + D++D 
Sbjct: 25  LVTGGNRGIGLAIARAFADAGDKVAITYRSGEP-------------PEGFLAVKCDITDT 71
Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSFND-IYKNTVEHAETVIRTNFYGA-KLLTESLL 149
             +E      +     +++L+ NAGV+ +  + + + E   +V+ TN  G  +++  +  
Sbjct: 72  EQVEQAYKEIEETHGPVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANR 131
Query: 150 PLFRRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFLQSVKDGTW 209
            + R    K R++ ISS +G L      N                               
Sbjct: 132 AMLR--AKKGRVVLISSVVGLLGSAGQAN------------------------------- 158
Query: 210 KSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ 260
                      YA SK  L  +   LA+      I+ N   PGF  T MT+
Sbjct: 159 -----------YAASKAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTK 198

>pdb|2EHD|A Chain A, Crystal Structure Analysis Of Oxidoreductase Length = 234

Iteration: 1
 Score = 54.3 bits (129), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 48/138 (34%), Positives = 68/138 (49%), Gaps = 8/138 (5%)
Query: 34  IVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSS 93
           ++TGA++GIG A  + L   G  V L ARD +R Q A+ +  E  LP+     DV +   
Sbjct: 9   LITGASRGIGEATARLLHAKGYRVGLMARDEKRLQ-ALAAELEGALPLPG---DVREEGD 64
Query: 94  IEAFVSWFKSNFAALDILVNNAGVS-FNDIYKNTVEHAETVIRTNFYGAKLLTESLLP-L 151
               V+  +  F  L  LVNNAGV     +++ T+E    V+ TN  GA L     +P L
Sbjct: 65  WARAVAAMEEAFGELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPAL 124
Query: 152 FRRSPSKSRILNISSRLG 169
            RR      I+N+ S  G
Sbjct: 125 LRR--GGGTIVNVGSLAG 140

>pdb|4IQG|C Chain C, Crystal Structure Of Bpro0239 Oxidoreductase From Polaromonas Sp. Js666 In Nadp Bound Form Length = 271

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 56/232 (24%), Positives = 84/232 (36%), Gaps = 46/232 (19%)
Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILT-ARDVERGQRAVESLSEKGLPVNFFQLDVSD 90
           + ++TG ++GIG A     A  G  V +  A +       V  + E G      Q DV+ 
Sbjct: 27  VVLITGGSRGIGAASALLAARQGYAVAVNYASNSAAADEVVRQIREAGGQALAVQADVAK 86
Query: 91  PSSIEAFVSWFKSNFAALDILVNNAGV--SFNDIYKNTVEHAETVIRTNFYGAKLLTESL 148
              + A      +    L  LVNNAGV      +   T+E  +     N +G+ L     
Sbjct: 87  EREVLAXFETVDAQLGRLSALVNNAGVVDQTTRVDGITLERLQRXFEINVFGSFLCAREA 146
Query: 149 LPLF--RRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFLQSVKD 206
           +     R   S   I+N+SS    L                                   
Sbjct: 147 VKRXSTRYGGSGGSIVNVSSAAARL----------------------------------- 171
Query: 207 GTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSM 258
                 G P  + DYA +K A++ +T+ LAK    EGI VN+  PG  +T +
Sbjct: 172 ------GSPGQYVDYAAAKGAIDTFTLGLAKEVATEGIRVNAVRPGIIETDI 217

>pdb|1XSE|A Chain A, Crystal Structure Of Guinea Pig 11beta-Hydroxysteroid Dehydrogenase Type 1 Length = 295

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/142 (28%), Positives = 73/142 (51%), Gaps = 6/142 (4%)
Query: 34  IVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLP-VNFFQLDVSDPS 92
           IVTGA+KGIG  +   LA++G  V++TAR  E  Q+ V    E G    ++    + D +
Sbjct: 36  IVTGASKGIGREIAYHLAKMGAHVVVTARSKEALQKVVARCLELGAASAHYIAGSMEDMT 95
Query: 93  SIEAFVSWFKSNFAALDILVNNAGVSFNDI--YKNTVEHAETVIRTNFYGAKLLTESLLP 150
             E FV+   +    LD+L+ N  V +N +  +   +++    +  NF+   +L+ + +P
Sbjct: 96  FAEEFVAEAGNLMGGLDMLILNH-VLYNRLTFFHGEIDNVRKSMEVNFHSFVVLSVAAMP 154
Query: 151 LFRRSPSKSRILNISSRLGTLS 172
           +  +  S+  I  +SS  G ++
Sbjct: 155 MLMQ--SQGSIAVVSSVAGKIT 174

>pdb|4DYV|A Chain A, Crystal Structure Of A Short-Chain DehydrogenaseREDUCTASE SDR FROM Xanthobacter Autotrophicus Py2 Length = 272

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/138 (32%), Positives = 64/138 (46%), Gaps = 6/138 (4%)
Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           IAIVTGA  G+G A+   LA  G  V L  R ++  Q     + +  L V     DV+DP
Sbjct: 30  IAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDALCV---PTDVTDP 86
Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAE--TVIRTNFYGAKLLTESLL 149
            S+ A  +     F  +D+L NNAG     I    +  A+   V+ TN  G  L T+   
Sbjct: 87  DSVRALFTATVEKFGRVDVLFNNAGTGAPAIPXEDLTFAQWKQVVDTNLTGPFLCTQEAF 146
Query: 150 PLFR-RSPSKSRILNISS 166
            + + + P   RI+N  S
Sbjct: 147 RVXKAQEPRGGRIINNGS 164

>pdb|3DWF|A Chain A, Crystal Structure Of The Guinea Pig 11beta-Hydroxysteroid Dehydrogenase Type 1 Mutant F278e Length = 276

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/142 (28%), Positives = 73/142 (51%), Gaps = 6/142 (4%)
Query: 34  IVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLP-VNFFQLDVSDPS 92
           IVTGA+KGIG  +   LA++G  V++TAR  E  Q+ V    E G    ++    + D +
Sbjct: 15  IVTGASKGIGREIAYHLAKMGAHVVVTARSKEALQKVVARCLELGAASAHYIAGSMEDMT 74
Query: 93  SIEAFVSWFKSNFAALDILVNNAGVSFNDI--YKNTVEHAETVIRTNFYGAKLLTESLLP 150
             E FV+   +    LD+L+ N  V +N +  +   +++    +  NF+   +L+ + +P
Sbjct: 75  FAEEFVAEAGNLMGGLDMLILNH-VLYNRLTFFHGEIDNVRKSMEVNFHSFVVLSVAAMP 133
Query: 151 LFRRSPSKSRILNISSRLGTLS 172
           +  +  S+  I  +SS  G ++
Sbjct: 134 MLMQ--SQGSIAVVSSVAGKIT 153

>pdb|3G49|A Chain A, N-(Pyridin-2-Yl) Arylsulfonamide Inhibitors Of 11b-Hydroxysteroid Dehydrogenase Type 1: Discovery Of Pf-915275 Length = 277

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/142 (28%), Positives = 73/142 (51%), Gaps = 6/142 (4%)
Query: 34  IVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLP-VNFFQLDVSDPS 92
           IVTGA+KGIG  +   LA++G  V++TAR  E  Q+ V    E G    ++    + D +
Sbjct: 15  IVTGASKGIGREIAYHLAKMGAHVVVTARSKEALQKVVARCLELGAASAHYIAGSMEDMT 74
Query: 93  SIEAFVSWFKSNFAALDILVNNAGVSFNDI--YKNTVEHAETVIRTNFYGAKLLTESLLP 150
             E FV+   +    LD+L+ N  V +N +  +   +++    +  NF+   +L+ + +P
Sbjct: 75  FAEEFVAEAGNLMGGLDMLILNH-VLYNRLTFFHGEIDNVRKSMEVNFHSFVVLSVAAMP 133
Query: 151 LFRRSPSKSRILNISSRLGTLS 172
           +  +  S+  I  +SS  G ++
Sbjct: 134 MLMQ--SQGSIAVVSSVAGKIT 153

>pdb|4FN4|A Chain A, Short-chain Nad(h)-dependent Dehydrogenase/reductase From Sulfolobus Acidocaldarius Length = 254

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/144 (29%), Positives = 72/144 (50%), Gaps = 5/144 (3%)
Query: 29  KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVE-RGQRAVESLSEKGLPVNFFQLD 87
           K  + IVTGA  GIG A+ K+ A L  ++++    +E R  + V+ L   G  V   + D
Sbjct: 6   KNKVVIVTGAGSGIGRAIAKKFA-LNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKAD 64
Query: 88  VSDPSSIEAFVSWFKSNFAALDILVNNAGV--SFNDIYKNTVEHAETVIRTNFYGAKLLT 145
           VS    +E FV      ++ +D+L NNAG+      + + + E  E V+  N Y A   +
Sbjct: 65  VSKKKDVEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSS 124
Query: 146 ESLLPLFRRSPSKSRILNISSRLG 169
            +++P+  +   K  I+N +S  G
Sbjct: 125 RAVIPIMLKQ-GKGVIVNTASIAG 147

>pdb|4HP8|A Chain A, Crystal Structure Of A Putative 2-Deoxy-D-Gluconate 3-Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506435) With Bound Nadp Length = 247

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/233 (23%), Positives = 94/233 (40%), Gaps = 58/233 (24%)
Query: 33  AIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP- 91
           A+VTGAN G+G A+   LA  G  V+  AR        ++ +++ G   +   +D +DP 
Sbjct: 12  ALVTGANTGLGQAIAVGLAAAGAEVVCAARRAP--DETLDIIAKDGGNASALLIDFADPL 69
Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAE----TVIRTNFYGAKLLTES 147
           ++ ++F        A  DILVNNAG+       ++VE +E     V+  N       T++
Sbjct: 70  AAKDSFTD------AGFDILVNNAGIIRR---ADSVEFSELDWDEVMDVNLKALFFTTQA 120
Query: 148 LLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFLQSVKDG 207
                       +++NI+S L     +R P+                             
Sbjct: 121 FAKELLAKGRSGKVVNIASLLSFQGGIRVPS----------------------------- 151
Query: 208 TWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ 260
                        Y  +K  +   T +LA  +  +GI+VN+  PG+ +T+ T+
Sbjct: 152 -------------YTAAKHGVAGLTKLLANEWAAKGINVNAIAPGYIETNNTE 191

>pdb|3LZ6|A Chain A, Guinea Pig 11beta Hydroxysteroid Dehydrogenase With Pf-877423 Length = 263

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/142 (28%), Positives = 73/142 (51%), Gaps = 6/142 (4%)
Query: 34  IVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLP-VNFFQLDVSDPS 92
           IVTGA+KGIG  +   LA++G  V++TAR  E  Q+ V    E G    ++    + D +
Sbjct: 13  IVTGASKGIGREIAYHLAKMGAHVVVTARSKEALQKVVARCLELGAASAHYIAGSMEDMT 72
Query: 93  SIEAFVSWFKSNFAALDILVNNAGVSFNDI--YKNTVEHAETVIRTNFYGAKLLTESLLP 150
             E FV+   +    LD+L+ N  V +N +  +   +++    +  NF+   +L+ + +P
Sbjct: 73  FAEEFVAEAGNLMGGLDMLILNH-VLYNRLTFFHGEIDNVRKSMEVNFHSFVVLSVAAMP 131
Query: 151 LFRRSPSKSRILNISSRLGTLS 172
           +  +  S+  I  +SS  G ++
Sbjct: 132 MLMQ--SQGSIAVVSSVAGKIT 151

>pdb|1Y5M|A Chain A, The Crystal Structure Of Murine 11b-Hydroxysteroid Dehydrogenase: An Important Therapeutic Target For Diabetes Length = 276

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/142 (27%), Positives = 70/142 (49%), Gaps = 4/142 (2%)
Query: 34  IVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLP-VNFFQLDVSDPS 92
           IVTGA+KGIG  +   L+++G  V+LTAR  E  Q+ V    E G    ++    + D +
Sbjct: 22  IVTGASKGIGREMAYHLSKMGAHVVLTARSEEGLQKVVSRCLELGAASAHYIAGTMEDMT 81
Query: 93  SIEAFVSWFKSNFAALDILV-NNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPL 151
             E F+         LD+L+ N+   +   ++ + +     V+  NF    +++ + LP+
Sbjct: 82  FAEQFIVKAGKLMGGLDMLILNHITQTSLSLFHDDIHSVRRVMEVNFLSYVVMSTAALPM 141
Query: 152 FRRSPSKSRILNISSRLGTLSK 173
            ++  S   I  ISS  G +++
Sbjct: 142 LKQ--SNGSIAVISSLAGKMTQ 161

>pdb|3G1T|A Chain A, Crystal Structure Of Short Chain Dehydrogenase From Salmonella Enterica Subsp. Enterica Serovar Typhi Str. Ct18 Length = 258

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/232 (25%), Positives = 96/232 (41%), Gaps = 48/232 (20%)
Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLS-EKGLPVNFFQLDVSD 90
           I +VTGA+ GIG       A  G TVIL  R+ E+ +R  + ++ E+ +   +F LD+  
Sbjct: 16  IILVTGASDGIGREAALTYARYGATVILLGRNEEKLRRVAQHIADEQHVQPQWFTLDLLT 75
Query: 91  PSSIEA--FVSWFKSNFAALDILVNNAGV--SFNDIYKNTVEHAETVIRTNFYGAKLLTE 146
            ++ E         +++  LD +++NAG+      + +   +  + V++ N     +LT+
Sbjct: 76  CTAEECRQVADRIAAHYPRLDGVLHNAGLLGEIGPMSEQDPQIWQDVMQVNVNATFMLTQ 135
Query: 147 SLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFLQSVKD 206
           +LLPL  +S + S +   SS +G   +                                 
Sbjct: 136 ALLPLLLKSDAGSLVFT-SSSVGRQGRAN------------------------------- 163
Query: 207 GTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSM 258
                      W  YA SK A      VLA  Y+   + VN   PG T+TSM
Sbjct: 164 -----------WGAYATSKFATEGMMQVLADEYQNRSLRVNCINPGGTRTSM 204

>pdb|1YXM|A Chain A, Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa Reductase Length = 303

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 66/140 (47%), Gaps = 9/140 (6%)
Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLP------VNFFQ 85
           +AIVTG   GIG A+VK L ELG  V++ +R +ER + A + L +  LP      V   Q
Sbjct: 20  VAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADEL-QANLPPTKQARVIPIQ 78
Query: 86  LDVSDPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHA-ETVIRTNFYGAKLL 144
            ++ +   +   V      F  ++ LVNN G  F    ++        V+ TN  G   +
Sbjct: 79  CNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYM 138
Query: 145 TESLLPLFRRSPSKSRILNI 164
            +++   + +    S I+NI
Sbjct: 139 CKAVYSSWMKEHGGS-IVNI 157

>pdb|3GMD|A Chain A, Structure-Based Design Of 7-Azaindole-Pyrrolidines As Inhibitors Of 11beta-Hydroxysteroid-Dehydrogenase Type I Length = 264

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 71/148 (47%), Gaps = 7/148 (4%)
Query: 34  IVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLP-VNFFQLDVSDPS 92
           IVTGA+KGIG  +   L+++G  V+LTAR  E  Q+ V    E G    ++    + D +
Sbjct: 13  IVTGASKGIGREMAYHLSKMGAHVVLTARSEEGLQKVVSRCLELGAASAHYIAGTMEDMT 72
Query: 93  SIEAFVSWFKSNFAALDILV-NNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPL 151
             E F+         LD+L+ N+   +   ++ + +     V+  NF    +++ + LP+
Sbjct: 73  FAEQFIVKAGKLMGGLDMLILNHITQTSLSLFHDDIHSVRRVMEVNFLSYVVMSTAALPM 132
Query: 152 FRRSPSKSRILNISSRLGTLSKVRNPNI 179
            ++  S   I  ISS  G   KV  P +
Sbjct: 133 LKQ--SNGSIAVISSLAG---KVTYPMV 155

>pdb|3OEC|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Thermoresistibile Length = 317

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 58/243 (23%), Positives = 91/243 (37%), Gaps = 59/243 (24%)
Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQ--------------RAVESLSEK 77
           +A +TGA +G G     RLA+ G  ++  A D+ R Q                V  + E+
Sbjct: 48  VAFITGAARGQGRTHAVRLAQDGADIV--AIDLCRQQPNLDYAQGSPEELKETVRLVEEQ 105
Query: 78  GLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDILVNNAGVSFN-DIYKNTVEHAETVIRT 136
           G  +   Q DV D +S++A V    + F  +DILV+N G+S   ++   T +    +++T
Sbjct: 106 GRRIIARQADVRDLASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQT 165
Query: 137 NFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRF 196
           N  GA     ++LP          ++ +SS +G                           
Sbjct: 166 NLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGL-------------------------- 199
Query: 197 VGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQT 256
                          +G P   + YA SK  +    + LA       I VNS  PG   T
Sbjct: 200 ---------------RGAPG-QSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNT 243
Query: 257 SMT 259
            M 
Sbjct: 244 EMA 246

>pdb|4DA9|A Chain A, Crystal Structure Of Putative Short-Chain DehydrogenaseREDUCTASE FROM Sinorhizobium Meliloti 1021 Length = 280

Iteration: 1
 Score = 52.0 bits (123), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 64/234 (27%), Positives = 98/234 (41%), Gaps = 48/234 (20%)
Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTA-RDVERGQRAVESLSEKGLPVNFFQLDVSD 90
           +AIVTG  +GIG  + + LA  G  + +T   D E     +  LS  G  V F + D++D
Sbjct: 31  VAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLAD 90
Query: 91  PSSIEAFVSWFKSNFAALDILVNNAGVSF---NDIYKNTVEHAETVIRTNFYGAKLLTES 147
            SS +A V    + F  +D LVNNAG++    +D      E+ +T++  N  G    T++
Sbjct: 91  LSSHQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQA 150
Query: 148 LLPLFRRSPSKS--RILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFLQSVK 205
           +L     S +++   I+NI+S    +S V                               
Sbjct: 151 VLKAXLASDARASRSIINITS----VSAVXTS---------------------------- 178
Query: 206 DGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMT 259
                    PE   DY  SK  L A++  LA R    GI+V    PG  ++  T
Sbjct: 179 ---------PE-RLDYCXSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDXT 222

>pdb|2BD0|A Chain A, Chlorobium Tepidum Sepiapterin Reductase Complexed With Nadp And Sepiapterin Length = 244

Iteration: 1
 Score = 51.2 bits (121), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 36/134 (26%), Positives = 59/134 (44%), Gaps = 8/134 (5%)
Query: 32  IAIVTGANKGIGFALVKRLA-------ELGLTVILTARDVERGQRAVESLSEKGLPVNFF 84
           I ++TGA KGIG A+    A       +    ++L++R     ++       +G   +  
Sbjct: 4   ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTI 63
Query: 85  QLDVSDPSSIEAFVSWFKSNFAALDILVNNAGVS-FNDIYKNTVEHAETVIRTNFYGAKL 143
             D+SD + +    +     +  +D LVNNAGV  F  +   T E  +  + TN  G   
Sbjct: 64  TADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFF 123
Query: 144 LTESLLPLFRRSPS 157
           LT++L  L  R  S
Sbjct: 124 LTQALFALMERQHS 137

>pdb|4EGF|A Chain A, Crystal Structure Of A L-Xylulose Reductase From Mycobacterium Smegmatis Length = 266

Iteration: 1
 Score = 50.8 bits (120), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 33  AIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEK-GLPVNFFQLDVSDP 91
           A++TGA KGIG  + +  A  G  ++L+ RDV     A  +L E+ G  V+   +D+++P
Sbjct: 23  ALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEP 82
Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSF 119
            +           F  LD+LVNNAG+S 
Sbjct: 83  DAPAELARRAAEAFGGLDVLVNNAGISH 110

>pdb|3A28|C Chain C, Crystal Structure Of L-2,3-Butanediol Dehydrogenase Length = 258

Iteration: 1
 Score = 50.8 bits (120), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 53/233 (22%), Positives = 93/233 (39%), Gaps = 51/233 (21%)
Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRA-----VESLSEKGLPVNFFQL 86
           +A+VTG  +GIG  + ++LA  G  + +     +  Q A     +E+  +K +   F  L
Sbjct: 4   VAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAV---FVGL 60
Query: 87  DVSDPSSIEAFVSWFKSNFAALDILVNNAGVS-FNDIYKNTVEHAETVIRTNFYGAKLLT 145
           DV+D ++ ++ +          D+LVNNAG++    + + T E  + +   N +      
Sbjct: 61  DVTDKANFDSAIDEAAEKLGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVF------ 114
Query: 146 ESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFLQSVK 205
                +F    + SR  +    LG   K+ N                             
Sbjct: 115 ----SVFFGIQAASRKFD---ELGVKGKIINAAS-------------------------- 141
Query: 206 DGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSM 258
                 QG+P I + Y+ +K A+   T   A+    +G +VN+Y PG   T M
Sbjct: 142 --IAAIQGFP-ILSAYSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGM 191

>pdb|1XQ1|A Chain A, X-Ray Structure Of Putative Tropinone Reducatse From Arabidopsis Thaliana Gene At1g07440 Length = 266

Iteration: 1
 Score = 50.8 bits (120), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 45/150 (30%), Positives = 62/150 (41%), Gaps = 3/150 (2%)
Query: 25  KWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFF 84
           +W  K    +VTG  KGIG A+V+  A  G  +   AR+       +    +KG  V   
Sbjct: 9   RWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGS 68
Query: 85  QLDVSDPSSIEAFVSWFKSNFAA-LDILVNNAG-VSFNDIYKNTVEHAETVIRTNFYGAK 142
             D S     E  +    S F   LDIL+NN G +        T E     I TN   A 
Sbjct: 69  VCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAY 128
Query: 143 LLTESLLPLFRRSPSKSRILNISSRLGTLS 172
            L++   PL + S     I+ +SS  G +S
Sbjct: 129 HLSQLAHPLLKASGC-GNIIFMSSIAGVVS 157

>pdb|3P19|A Chain A, Improved Nadph-Dependent Blue Fluorescent Protein Length = 266

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 71/148 (47%), Gaps = 18/148 (12%)
Query: 28  SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFF-QL 86
           S + + ++TGA+ GIG A+ +R +E G  ++L AR VER       L    LP     Q+
Sbjct: 14  SMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVER-------LKALNLPNTLCAQV 66
Query: 87  DVSDPSSIEAFVSWFKSNFAALDILVNNAGVS-FNDIYKNTVEHAETVIRTNFYGAKLLT 145
           DV+D  + +  ++  +  +   D +VNNAG+     I        + +   N  G     
Sbjct: 67  DVTDKYTFDTAITRAEKIYGPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGM 126
Query: 146 ESLLPLFRRSPSKSR----ILNISSRLG 169
           +++L     +P K+R    I+NISS  G
Sbjct: 127 QAVL-----APMKARNCGTIINISSIAG 149

>pdb|1G6K|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant E96a Complexed With Nad+ Length = 261

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 53/228 (23%), Positives = 91/228 (39%), Gaps = 46/228 (20%)
Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAV-ESLSEKGLPVNFFQLDVSD 90
           + ++TG++ G+G ++  R A     V++  R  E    +V E + + G      + DV+ 
Sbjct: 9   VVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTV 68
Query: 91  PSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAE--TVIRTNFYGAKLLTESL 148
            S +   V      F  LD+++NNAG++ N +  + +  ++   VI TN  GA L +   
Sbjct: 69  ESDVINLVQSAIKEFGKLDVMINNAGLA-NPVSSHEMSLSDWNKVIDTNLTGAFLGSREA 127
Query: 149 LPLFRRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFLQSVKDGT 208
           +  F  +  K  ++N+SS                                          
Sbjct: 128 IKYFVENDIKGTVINMSS-----------------------------------------V 146
Query: 209 WKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQT 256
            +   WP ++  YA SK  +   T  LA  Y  +GI VN+  PG   T
Sbjct: 147 HEKIPWP-LFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINT 193

>pdb|4E6P|A Chain A, Crystal Structure Of A Probable Sorbitol Dehydrogenase (Target Psi- 012078) From Sinorhizobium Meliloti 1021 Length = 259

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 64/138 (46%), Gaps = 4/138 (2%)
Query: 33  AIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPS 92
           A++TG+ +GIG A  +     G TV +   D+ER ++A    +E G      Q DV+   
Sbjct: 11  ALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAA---AEIGPAAYAVQXDVTRQD 67
Query: 93  SIEAFVSWFKSNFAALDILVNNAGV-SFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPL 151
           SI+A ++    +   LDILVNNA +     I + T E  E +   N  G     ++    
Sbjct: 68  SIDAAIAATVEHAGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQ 127
Query: 152 FRRSPSKSRILNISSRLG 169
                   +I+N +S+ G
Sbjct: 128 XIAQGRGGKIINXASQAG 145

>pdb|4IIN|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier Protein]reductase From Helicobacter Pylori 26695 Complexed With Nad+ Length = 271

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/139 (32%), Positives = 67/139 (48%), Gaps = 5/139 (3%)
Query: 34  IVTGANKGIGFALVKRLAELGLTVILTAR-DVERGQRAVESLSEKGLPVNFFQLDVSDPS 92
           ++TGA+KGIG  + K LA +GL V +  R + E        L EKG      + D +  S
Sbjct: 33  LITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASES 92
Query: 93  S-IEAFVSWFKSNFAALDILVNNAGVSFNDI-YKNTVEHAETVIRTNFYGAKLLTESLLP 150
             IEA  +  +S+   L  LVNNAGV  + +  K   E    VI  N   A +     L 
Sbjct: 93  DFIEAIQTIVQSD-GGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALK 151
Query: 151 LFRRSPSKSRILNISSRLG 169
           +  +S   S ++N++S +G
Sbjct: 152 VMSKSRFGS-VVNVASIIG 169

>pdb|1ZEM|A Chain A, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase Length = 262

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 66/144 (45%), Gaps = 11/144 (7%)
Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           + +VTGA   IG A   RLAE G  + L   + E  ++A  S+ EKG+    +  DV+  
Sbjct: 9   VCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSE 68
Query: 92  SSIEAFVSWFKSNFAALDILVNNAGV--SFNDIYKNTVEHAETVIRTNFYGA----KLLT 145
            ++   V     +F  +D L NNAG   +F  +     +    V+  N  GA    K ++
Sbjct: 69  EAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVS 128
Query: 146 ESLLPLFRRSPSKSRILNISSRLG 169
             ++     + +  RI+N +S  G
Sbjct: 129 RQMI-----TQNYGRIVNTASMAG 147

>pdb|2HSD|A Chain A, The Refined Three-Dimensional Structure Of 3alpha,20beta- Hydroxysteroid Dehydrogenase And Possible Roles Of The Residues Conserved In Short-Chain Dehydrogenases Length = 253

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 58/239 (24%), Positives = 93/239 (38%), Gaps = 53/239 (22%)
Query: 34  IVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSS 93
           I+TG  +G+G    ++    G  V+L     E G      L +      +  LDV+    
Sbjct: 9   IITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGD---AARYQHLDVTIEED 65
Query: 94  IEAFVSWFKSNFAALDILVNNAGVSFNDIYKN-TVEHAETVIRTNFYGAKLLTESLLPLF 152
            +  V++ +  F ++D LVNNAG+S     +  +VE    V+  N  G  +  ++++P  
Sbjct: 66  WQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAM 125
Query: 153 RRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFLQSVKDGTWKSQ 212
           + +   S I+NISS  G                           +GL L S         
Sbjct: 126 KDAGGGS-IVNISSAAG--------------------------LMGLALTS--------- 149
Query: 213 GWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMT------QGQGSH 265
                   Y  SK  +   + + A     + I VNS  PG T T MT      QG+G++
Sbjct: 150 -------SYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQGEGNY 201

>pdb|1HDC|A Chain A, Mechanism Of Inhibition Of 3alpha,20beta-Hydroxysteroid Dehydrogenase By A Licorice-Derived Steroidal Inhibitor Length = 254

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 58/239 (24%), Positives = 93/239 (38%), Gaps = 53/239 (22%)
Query: 34  IVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSS 93
           I+TG  +G+G    ++    G  V+L     E G      L +      +  LDV+    
Sbjct: 9   IITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGD---AARYQHLDVTIEED 65
Query: 94  IEAFVSWFKSNFAALDILVNNAGVSFNDIYKN-TVEHAETVIRTNFYGAKLLTESLLPLF 152
            +  V++ +  F ++D LVNNAG+S     +  +VE    V+  N  G  +  ++++P  
Sbjct: 66  WQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAM 125
Query: 153 RRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFLQSVKDGTWKSQ 212
           + +   S I+NISS  G                           +GL L S         
Sbjct: 126 KDAGGGS-IVNISSAAG--------------------------LMGLALTS--------- 149
Query: 213 GWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMT------QGQGSH 265
                   Y  SK  +   + + A     + I VNS  PG T T MT      QG+G++
Sbjct: 150 -------SYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQGEGNY 201

>pdb|1ULS|A Chain A, Crystal Structure Of Tt0140 From Thermus Thermophilus Hb8 Length = 245

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 61/234 (26%), Positives = 99/234 (42%), Gaps = 54/234 (23%)
Query: 29  KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERG--QRAVESLSEKGLPVNFFQL 86
           K+   ++TGA  GIG A ++  A+ G    L A D+E G  + A E++     PV     
Sbjct: 4   KDKAVLITGAAHGIGRATLELFAKEGAR--LVACDIEEGPLREAAEAVGAH--PV---VX 56
Query: 87  DVSDPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIY-KNTVEHAETVIRTNFYGAKLLT 145
           DV+DP+S+E   +   ++   LD +V+ AG++ ++ + K  +E  E V+R N  G+ L+ 
Sbjct: 57  DVADPASVERGFAEALAHLGRLDGVVHYAGITRDNFHWKXPLEDWELVLRVNLTGSFLVA 116
Query: 146 ESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFLQSVK 205
           ++     R     S +L       T S+V                     ++G   Q+  
Sbjct: 117 KAASEAXREKNPGSIVL-------TASRV---------------------YLGNLGQA-- 146
Query: 206 DGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMT 259
                         +YA S   +   T  LA      GI VN+  PGF +T  T
Sbjct: 147 --------------NYAASXAGVVGLTRTLALELGRWGIRVNTLAPGFIETRXT 186

>pdb|1RWB|A Chain A, Cooperative Effect Of Two Surface Amino Acid Mutations (Q252l And E170k) Of Glucose Dehydrogenase From Bacillus Megaterium Iwg3 For The Stabilization Of Oligomeric State Length = 261

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 53/228 (23%), Positives = 90/228 (39%), Gaps = 46/228 (20%)
Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAV-ESLSEKGLPVNFFQLDVSD 90
           + ++TG++ G+G ++  R A     V++  R  E    +V E + + G      + DV+ 
Sbjct: 9   VVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTV 68
Query: 91  PSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAE--TVIRTNFYGAKLLTESL 148
            S +   V      F  LD+++NNAG+  N +  + +  ++   VI TN  GA L +   
Sbjct: 69  ESDVINLVQSAIKEFGKLDVMINNAGLE-NPVSSHEMSLSDWNKVIDTNLTGAFLGSREA 127
Query: 149 LPLFRRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFLQSVKDGT 208
           +  F  +  K  ++N+SS                                          
Sbjct: 128 IKYFVENDIKGTVINMSS-----------------------------------------V 146
Query: 209 WKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQT 256
            +   WP ++  YA SK  +   T  LA  Y  +GI VN+  PG   T
Sbjct: 147 HEKIPWP-LFVHYAASKGGMKLMTKTLALEYAPKGIRVNNIGPGAINT 193

>pdb|4IBO|A Chain A, Crystal Structure Of A Putative Gluconate Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506446) Length = 271

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/231 (24%), Positives = 88/231 (38%), Gaps = 48/231 (20%)
Query: 33  AIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPS 92
           A+VTG+++G+G A+ + LA  G  +++   D  R  + V+     G        DV+  S
Sbjct: 29  ALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSES 88
Query: 93  S-IEAFVSWFKSNFAALDILVNNAGVSFND-IYKNTVEHAETVIRTNFYGAKLL-TESLL 149
             IEAF    +     +DILVNNAG+ F   + +      + VI TN   A ++  E+  
Sbjct: 89  EIIEAFARLDEQGI-DVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAK 147
Query: 150 PLFRRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFLQSVKDGTW 209
            +  R   K  I+NI S    L++                                    
Sbjct: 148 RMIPRGYGK--IVNIGSLTSELARA----------------------------------- 170
Query: 210 KSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ 260
                      Y V+K  +   T  +A  +   GI  N+  PG+  T M Q
Sbjct: 171 -------TVAPYTVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQ 214

>pdb|1GCO|A Chain A, Crystal Structure Of Glucose Dehydrogenase Complexed With Nad+ Length = 261

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 53/228 (23%), Positives = 90/228 (39%), Gaps = 46/228 (20%)
Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAV-ESLSEKGLPVNFFQLDVSD 90
           + ++TG++ G+G ++  R A     V++  R  E    +V E + + G      + DV+ 
Sbjct: 9   VVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTV 68
Query: 91  PSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAE--TVIRTNFYGAKLLTESL 148
            S +   V      F  LD+++NNAG+  N +  + +  ++   VI TN  GA L +   
Sbjct: 69  ESDVINLVQSAIKEFGKLDVMINNAGLE-NPVSSHEMSLSDWNKVIDTNLTGAFLGSREA 127
Query: 149 LPLFRRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFLQSVKDGT 208
           +  F  +  K  ++N+SS                                          
Sbjct: 128 IKYFVENDIKGTVINMSS-----------------------------------------V 146
Query: 209 WKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQT 256
            +   WP ++  YA SK  +   T  LA  Y  +GI VN+  PG   T
Sbjct: 147 HEKIPWP-LFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINT 193

>pdb|3QIV|A Chain A, Crystal Structure Of A Putative Short-Chain Dehydrogenase Or 3- Oxoacyl-[acyl-Carrier-Protein] Reductase From Mycobacterium Paratuberculosis Atcc Baa-968 K-10 Length = 253

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 53/225 (23%), Positives = 81/225 (36%), Gaps = 42/225 (18%)
Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           + IVTG+  GIG A  + LA  G  V++   + E  +   + +   G       +DVSDP
Sbjct: 11  VGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDP 70
Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPL 151
            S +A      + F  +D LVNNA +                    F G KL  + LL +
Sbjct: 71  ESAKAMADRTLAEFGGIDYLVNNAAI--------------------FGGMKL--DFLLTI 108
Query: 152 FRRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFLQSVKDGTWKS 211
                 K   +N+   L     V     K              R  G  +       W  
Sbjct: 109 DPEYYKKFMSVNLDGALWCTRAVYKKMTK--------------RGGGAIVNQSSTAAWLY 154
Query: 212 QGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQT 256
             +      Y ++K+ +N  T  L++   G  I +N+  PG   T
Sbjct: 155 SNY------YGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDT 193

>pdb|1GEE|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant Q252l Complexed With Nad+ Length = 261

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 53/228 (23%), Positives = 90/228 (39%), Gaps = 46/228 (20%)
Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAV-ESLSEKGLPVNFFQLDVSD 90
           + ++TG++ G+G ++  R A     V++  R  E    +V E + + G      + DV+ 
Sbjct: 9   VVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTV 68
Query: 91  PSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAE--TVIRTNFYGAKLLTESL 148
            S +   V      F  LD+++NNAG+  N +  + +  ++   VI TN  GA L +   
Sbjct: 69  ESDVINLVQSAIKEFGKLDVMINNAGLE-NPVSSHEMSLSDWNKVIDTNLTGAFLGSREA 127
Query: 149 LPLFRRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFLQSVKDGT 208
           +  F  +  K  ++N+SS                                          
Sbjct: 128 IKYFVENDIKGTVINMSS-----------------------------------------V 146
Query: 209 WKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQT 256
            +   WP ++  YA SK  +   T  LA  Y  +GI VN+  PG   T
Sbjct: 147 HEKIPWP-LFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINT 193

>pdb|3VTZ|A Chain A, Structure Of Thermoplasma Volcanium Aldohexose Dehydrogenase Length = 269

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 68/138 (49%), Gaps = 12/138 (8%)
Query: 30  ETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVS 89
           + +AIVTG + GIG A+V  L   G  V+  + D E+    V          + F++DV+
Sbjct: 14  DKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLD-EKSDVNVS---------DHFKIDVT 63
Query: 90  DPSSIEAFVSWFKSNFAALDILVNNAGVS-FNDIYKNTVEHAETVIRTNFYGAKLLTESL 148
           +   ++  V      +  +DILVNNAG+  ++ ++    E    +I  N  G+ L+ +  
Sbjct: 64  NEEEVKEAVEKTTKKYGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYT 123
Query: 149 LPLFRRSPSKSRILNISS 166
           +P+   +     I+NI+S
Sbjct: 124 IPVM-LAIGHGSIINIAS 140

>pdb|3RIH|A Chain A, Crystal Structure Of A Putative Short Chain Dehydrogenase Or Reductase From Mycobacterium Abscessus Length = 293

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/222 (24%), Positives = 79/222 (35%), Gaps = 46/222 (20%)
Query: 34  IVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLP-VNFFQLDVSDPS 92
           +VTG  KGIG  +    A  G  V + AR           L E G   V   +LDVSDP 
Sbjct: 45  LVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPG 104
Query: 93  SIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTV--EHAETVIRTNFYGAKLLTESLLP 150
           S           F ALD++  NAG+ F +   +T+  E    V+  N  G     ++ L 
Sbjct: 105 SCADAARTVVDAFGALDVVCANAGI-FPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLA 163
Query: 151 LFRRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFLQSVKDGTWK 210
               S  + R++  SS  G ++                                      
Sbjct: 164 PLTAS-GRGRVILTSSITGPVT-------------------------------------- 184
Query: 211 SQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPG 252
             G+P  W+ Y  SK A   +    A      G++VN+  PG
Sbjct: 185 --GYPG-WSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPG 223

>pdb|3PGX|A Chain A, Crystal Structure Of A Putative Carveol Dehydrogenase From Mycobacterium Paratuberculosis Bound To Nicotinamide Adenine Dinucleotide Length = 280

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 68/155 (43%), Gaps = 20/155 (12%)
Query: 32  IAIVTGANKGIGFALVKRLAELGLTVIL----------------TARDVERGQRAVESLS 75
           +A +TGA +G G +   RLA  G  +I                 +  D++   R VE   
Sbjct: 17  VAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQG 76
Query: 76  EKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDILVNNAGV-SFNDIYKNTVEHAETVI 134
            K L      LDV D +++   V+     F  LD++V NAGV S+  +++ T E  +TVI
Sbjct: 77  RKAL---TRVLDVRDDAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVI 133
Query: 135 RTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLG 169
             N  G      + +P    + +   I+ +SS  G
Sbjct: 134 GVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAG 168

>pdb|3F1L|A Chain A, The 0.95 A Structure Of An Oxidoreductase, Ycik From E.Coli Length = 252

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 59/235 (25%), Positives = 98/235 (41%), Gaps = 51/235 (21%)
Query: 30  ETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEK-GLPVNFFQLDV 88
           + I +VTGA+ GIG       A  G TVIL  R+ E+ ++    ++E+ G    +F LD+
Sbjct: 12  DRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDL 71
Query: 89  SDPSS--IEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAET---VIRTNFYGAKL 143
              +S   +        N+  LD +++NAG+   D+   + ++ +    V++ N     +
Sbjct: 72  LTCTSENCQQLAQRIAVNYPRLDGVLHNAGL-LGDVCPMSEQNPQVWQDVMQVNVNATFM 130
Query: 144 LTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFLQS 203
           LT++LLPL  +S + S +   SS +G   +                              
Sbjct: 131 LTQALLPLLLKSDAGSLVFT-SSSVGRQGRAN---------------------------- 161
Query: 204 VKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSM 258
                         W  YA SK A      VLA  Y+ + + VN   PG T+T+M
Sbjct: 162 --------------WGAYAASKFATEGMMQVLADEYQ-QRLRVNCINPGGTRTAM 201

>pdb|4DQX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Rhizobium Etli Cfn 42 Length = 277

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 53/224 (23%), Positives = 89/224 (39%), Gaps = 47/224 (20%)
Query: 30  ETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVS 89
           + + IVTG   GIG A  +  A+ G  V++   + +   R    +  K   V   ++DVS
Sbjct: 27  QRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGV---RVDVS 83
Query: 90  DPSSIEAFVSWFKSNFAALDILVNNAGV-SFNDIYKNTVEHAETVIRTNFYGAKLLTESL 148
                E+ V    + +  +D+LVNNAG  +  ++     E  + +   N  G  L ++ +
Sbjct: 84  SAKDAESXVEKTTAKWGRVDVLVNNAGFGTTGNVVTIPEETWDRIXSVNVKGIFLCSKYV 143
Query: 149 LPLFRRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFLQSVKDGT 208
           +P+ RR+   S I+N +S   T                                ++ D  
Sbjct: 144 IPVXRRNGGGS-IINTTSYTAT-------------------------------SAIAD-- 169
Query: 209 WKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPG 252
                     T Y  SK A+++ T   A  +  EGI VN+  PG
Sbjct: 170 ---------RTAYVASKGAISSLTRAXAXDHAKEGIRVNAVAPG 204

>pdb|3OIC|A Chain A, Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl) From B. Subtilis (Apo Form) Length = 258

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Query: 33  AIVTGANKGIGFALVKRLAELGLTVILT-ARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           A+VTG+++G+G A   RLAE G  +++  AR  +      E + + G+ V   + +V  P
Sbjct: 7   ALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQP 66
Query: 92  SSIEAFVSWFKSNFAALDILVNNA 115
           + I+         F  LD+ VNNA
Sbjct: 67  AKIKEMFQQIDETFGRLDVFVNNA 90

>pdb|3F5Q|A Chain A, Crystal Structure Of Putative Short Chain Dehydrogenase From Escherichia Coli Cft073 Length = 262

Iteration: 1
 Score = 48.9 bits (115), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 59/235 (25%), Positives = 97/235 (41%), Gaps = 51/235 (21%)
Query: 30  ETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEK-GLPVNFFQLDV 88
           + I +VTGA+ GIG       A  G TVIL  R+ E+ ++    ++E+ G    +F LD+
Sbjct: 14  DRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDL 73
Query: 89  SDPSS--IEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAET---VIRTNFYGAKL 143
              +S   +        N+  LD +++NAG+   D+   + +  +    V++ N     +
Sbjct: 74  LTCTSEDCQQLAQRIAVNYPRLDGVLHNAGL-LGDVCPMSEQDPQVWQDVMQVNVNATFM 132
Query: 144 LTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFLQS 203
           LT++LLPL  +S + S +   SS +G   +                              
Sbjct: 133 LTQALLPLLLKSDAGSLVFT-SSSVGRQGRAN---------------------------- 163
Query: 204 VKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSM 258
                         W  YA SK A      VLA  Y+ + + VN   PG T+T+M
Sbjct: 164 --------------WGAYAASKFATEGMMQVLADEYQ-QRLRVNCINPGGTRTAM 203

>pdb|3F5S|A Chain A, Crystal Structure Of Putatitve Short Chain Dehydrogenase From Shigella Flexneri 2a Str. 301 Length = 255

Iteration: 1
 Score = 48.1 bits (113), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 59/235 (25%), Positives = 98/235 (41%), Gaps = 51/235 (21%)
Query: 30  ETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEK-GLPVNFFQLDV 88
           + I +VTGA+ GIG       A  G TVIL  R+ E+ ++    ++E+ G    +F LD+
Sbjct: 10  DRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDL 69
Query: 89  SDPSS--IEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAET---VIRTNFYGAKL 143
              +S   +        N+  LD +++NAG+   D+   + ++ +    V++ N     +
Sbjct: 70  LTCTSENCQQLAQRIVVNYPRLDGVLHNAGL-LGDVCPMSEQNPQVWQDVMQINVNATFM 128
Query: 144 LTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFLQS 203
           LT++LLPL  +S + S +   SS +G   +                              
Sbjct: 129 LTQALLPLLLKSDAGSLVFT-SSSVGRQGRAN---------------------------- 159
Query: 204 VKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSM 258
                         W  YA SK A      VLA  Y+ + + VN   PG T+T+M
Sbjct: 160 --------------WGAYAASKFATEGMMQVLADEYQ-QRLRVNCINPGGTRTAM 199

>pdb|3R1I|A Chain A, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 276

Iteration: 1
 Score = 47.8 bits (112), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 48/229 (20%), Positives = 80/229 (34%), Gaps = 41/229 (17%)
Query: 33  AIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPS 92
           A++TGA+ GIG  +    AE G  V + AR  +  Q   + ++  G      + DV+ P 
Sbjct: 35  ALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPD 94
Query: 93  SIEAFVSWFKSNFAALDILVNNAG-VSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPL 151
            +   +         +DI V NAG VS   +    +E  + +  TN  G  L  ++    
Sbjct: 95  QVRGMLDQMTGELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARA 154
Query: 152 FRRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFLQSVKDGTWKS 211
                    I+  +S  G +  +                                     
Sbjct: 155 MVDQGLGGTIITTASMSGHIINI------------------------------------- 177
Query: 212 QGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ 260
              P+  + Y  SK A+   T  +A       I VNS  PG+ +T + +
Sbjct: 178 ---PQQVSHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVE 223

>pdb|3S55|A Chain A, Crystal Structure Of A Putative Short-Chain DehydrogenaseREDUCTASE From Mycobacterium Abscessus Bound To Nad Length = 281

Iteration: 1
 Score = 47.4 bits (111), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 59/246 (23%), Positives = 95/246 (38%), Gaps = 66/246 (26%)
Query: 33  AIVTGANKGIGFALVKRLAELGLTVIL---------------TARDVERGQRAVESLSEK 77
           A++TG  +G+G +    LAE G  + +               TA D+      VE    +
Sbjct: 13  ALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRR 72
Query: 78  GLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHA--ETVIR 135
            +     ++DV D +++E+FV+  +     +DI + NAG+S   +    VE A  + VI 
Sbjct: 73  CISA---KVDVKDRAALESFVAEAEDTLGGIDIAITNAGISTIALLPE-VESAQWDEVIG 128
Query: 136 TNFYGAKLLTESLLP-LFRRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXX 194
           TN  G      ++ P + +R  +  RI+ +SS LG  +                      
Sbjct: 129 TNLTGTFNTIAAVAPGMIKR--NYGRIVTVSSMLGHSAN--------------------- 165
Query: 195 RFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFT 254
                F Q+                 Y  SK  +   T   A    G GI+VN+  PG  
Sbjct: 166 -----FAQA----------------SYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNI 204
Query: 255 QTSMTQ 260
           +T MT 
Sbjct: 205 ETPMTH 210

>pdb|1K2W|A Chain A, Crystal Structure Of Sorbitol Dehydrogenase From R. Sphaeroides Length = 256

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/138 (25%), Positives = 66/138 (47%), Gaps = 4/138 (2%)
Query: 33  AIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPS 92
           A++TG+ +GIG A  +     G  V +   ++E  +    + +E G       LDV+D +
Sbjct: 8   ALITGSARGIGRAFAEAYVREGARVAIADINLEAAR---ATAAEIGPAACAIALDVTDQA 64
Query: 93  SIEAFVSWFKSNFAALDILVNNAGV-SFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPL 151
           SI+  V+     + ++DILVNNA +     I + T E  + +   N  G   + +++   
Sbjct: 65  SIDRCVAELLDRWGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARA 124
Query: 152 FRRSPSKSRILNISSRLG 169
                   +I+N++S+ G
Sbjct: 125 MIAGGRGGKIINMASQAG 142

>pdb|4DRY|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Rhizobium Meliloti Length = 281

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 59/125 (47%), Gaps = 4/125 (3%)
Query: 46  LVKRLAELGLTVILTARDVERGQRAVESLSEK-GLPVNFFQLDVSDPSSIEAFVSWFKSN 104
           + + L+  G +V++T R  +    A   +  + G  V     DV DP  + A  +  ++ 
Sbjct: 49  IAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAE 108
Query: 105 FAALDILVNNAGVSFNDI--YKNTVEHAETVIRTNFYGAKLLTESLLPLFR-RSPSKSRI 161
           FA LD+LVNNAG +   +   + T E    ++  N  GA L T+      + ++P   RI
Sbjct: 109 FARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRXXKAQTPRGGRI 168
Query: 162 LNISS 166
           +N  S
Sbjct: 169 INNGS 173

>pdb|3GDF|A Chain A, Crystal Structure Of The Nadp-Dependent Mannitol Dehydrogenase From Cladosporium Herbarum. Length = 267

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 65/144 (45%), Gaps = 9/144 (6%)
Query: 29  KETIAIVTGAN--KGIGFALVKRLAELGLTVILTARDVERGQRAVESLSE----KGLPVN 82
           K  + +VTGA+  KG+G    +  AE+G  V +T     R Q A E++ E     G+   
Sbjct: 19  KGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITY--ASRAQGAEENVKELEKTYGIKAK 76
Query: 83  FFQLDVSDPSSIEAFVSWFKSNFAALDILVNNAGVSFND-IYKNTVEHAETVIRTNFYGA 141
            ++  V    S E  V    ++F  +D  + NAG + +  I   +VE    V++ +  G 
Sbjct: 77  AYKCQVDSYESCEKLVKDVVADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGT 136
Query: 142 KLLTESLLPLFRRSPSKSRILNIS 165
               +++   F+   + S ++  S
Sbjct: 137 FHCAKAVGHHFKERGTGSLVITAS 160

>pdb|3F9I|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase Rickettsia Prowazekii Length = 249

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 55/229 (24%), Positives = 97/229 (42%), Gaps = 53/229 (23%)
Query: 33  AIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPS 92
           +++TGA+ GIG A+ + L +LG  VI++  + E+ +    +L +       + ++V + +
Sbjct: 17  SLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDN------YTIEVCNLA 70
Query: 93  SIEAFVSWFKSNFAALDILVNNAGVSFNDI-YKNTVEHAETVIRTNFYGAKLLT-ESLLP 150
           + E   S   S  + LDILV NAG++ + +  +   +  + VI  N     +L  E++  
Sbjct: 71  NKEE-CSNLISKTSNLDILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKK 129
Query: 151 LFRRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFLQSVKDGTWK 210
           + ++     RI+NISS +G      NP                                 
Sbjct: 130 MIQK--RYGRIINISSIVGIAG---NPG-------------------------------- 152
Query: 211 SQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMT 259
                    +Y  SK  L   T  L+      GI+VN+  PGF ++ MT
Sbjct: 153 -------QANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMT 194

>pdb|3TOX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase In Complex With Nad(P) From Sinorhizobium Meliloti 1021 Length = 280

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 60/227 (26%), Positives = 78/227 (34%), Gaps = 44/227 (19%)
Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           IAIVTGA+ GIG A     A  G  V++TAR+        + ++  G        DV D 
Sbjct: 10  IAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDE 69
Query: 92  SSIEAFVSWFKSNFAALDILVNNAGV--SFNDIYKNTVEHAETVIRTNFYGAKLLTESLL 149
           +  EA V      F  LD   NNAG   +  +I   +VE     + TN   A L  +  +
Sbjct: 70  ALHEALVELAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQV 129
Query: 150 PLFRRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFLQSVKDGTW 209
           P        S     S                              FVG           
Sbjct: 130 PAIAALGGGSLTFTSS------------------------------FVG----------- 148
Query: 210 KSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQT 256
            + G+  +   YA SK  L      LA      GI VN+  PG T T
Sbjct: 149 HTAGFAGV-APYAASKAGLIGLVQALAVELGARGIRVNALLPGGTDT 194

>pdb|1NFF|A Chain A, Crystal Structure Of Rv2002 Gene Product From Mycobacterium Tuberculosis Length = 260

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 53/230 (23%), Positives = 87/230 (37%), Gaps = 47/230 (20%)
Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           +A+V+G  +G+G + V+ +   G  V+      E G+     L++      +  LDV+ P
Sbjct: 9   VALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADA---ARYVHLDVTQP 65
Query: 92  SSIEAFVSWFKSNFAALDILVNNAGV-SFNDIYKNTVEHAETVIRTNFYGAKLLTESLLP 150
           +  +A V    + F  L +LVNNAG+ +   I    +   + ++  N  G  L   +++ 
Sbjct: 66  AQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVK 125
Query: 151 LFRRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFLQSVKDGTWK 210
             + +  +  I+NISS  G                                     GT  
Sbjct: 126 PMKEA-GRGSIINISSIEGLA-----------------------------------GTVA 149
Query: 211 SQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ 260
             G       Y  +K A+   T   A      GI VNS  PG  +T MT 
Sbjct: 150 CHG-------YTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTD 192

>pdb|1YDE|A Chain A, Crystal Structure Of Human Retinal Short-Chain DehydrogenaseREDUCTASE 3 Length = 270

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 62/132 (46%), Gaps = 10/132 (7%)
Query: 47  VKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQL-DVSDPSSIEAFVSWFKSNF 105
           V+     G  V++  +D E G RA+    E+ LP   F L DV+    ++  VS     F
Sbjct: 26  VRAFVNSGARVVICDKD-ESGGRAL----EQELPGAVFILCDVTQEDDVKTLVSETIRRF 80
Query: 106 AALDILVNNAG--VSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILN 163
             LD +VNNAG         + + +    ++  N  G   LT+  LP  R+  S+  ++N
Sbjct: 81  GRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRK--SQGNVIN 138
Query: 164 ISSRLGTLSKVR 175
           ISS +G + + +
Sbjct: 139 ISSLVGAIGQAQ 150

>pdb|3IS3|A Chain A, Crystal Structure Of 17beta-Hydroxysteroid Dehydrogenase (Apo Form) From Fungus Cochliobolus Lunatus Length = 270

Iteration: 1
 Score = 45.1 bits (105), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 60/268 (22%), Positives = 101/268 (37%), Gaps = 60/268 (22%)
Query: 32  IAIVTGANKGIGFALVKRLAELGLTVIL----TARDVERGQRAVESLSEKGLPVNFFQLD 87
           +A+VTG+ +GIG A+   L  LG  V++    + +D E+    +++L    + +   + D
Sbjct: 20  VALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAI---KAD 76
Query: 88  VSDPSSIEAFVSWFKSNFAALDILVNNAG-VSFNDIYKNTVEHAETVIRTNFYGAKLLTE 146
           +     I        ++F  LDI V+N+G VSF  +   T E  + V   N  G   +  
Sbjct: 77  IRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAR 136
Query: 147 SLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFLQSVKD 206
                +R      RI+  SS                                        
Sbjct: 137 E---AYRHLTEGGRIVLTSSN--------------------------------------- 154
Query: 207 GTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSH- 265
            T K    P+  + Y+ SK A++++  + +K    + I+VN+  PG T T M      H 
Sbjct: 155 -TSKDFSVPK-HSLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHY 212
Query: 266 -------TADEAADVGARLLLLHPQQLP 286
                  TA++   + A    LH    P
Sbjct: 213 IPNGTSYTAEQRQQMAAHASPLHRNGWP 240

>pdb|1IOL|A Chain A, Estrogenic 17-beta Hydroxysteroid Dehydrogenase Complexed 17-beta- Estradiol Length = 327

Iteration: 1
 Score = 45.1 bits (105), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 64/143 (44%), Gaps = 10/143 (6%)
Query: 31  TIAIVTGANKGIGFALVKRLA---ELGLTVILTARDVERGQRAVESLSEKGLP---VNFF 84
           T+ ++TG + GIG  L  RLA        V  T RD++   R  E+      P   +   
Sbjct: 3   TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETL 62
Query: 85  QLDVSDPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHA-ETVIRTNFYGAKL 143
           QLDV D  S+ A  +  +     +D+LV NAG+      +   E A  +V+  N  G   
Sbjct: 63  QLDVRDSKSVAA--ARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLEVNVVGTVR 120
Query: 144 LTESLLPLFRRSPSKSRILNISS 166
           + ++ LP  +R  S  R+L   S
Sbjct: 121 MLQAFLPDMKRRGS-GRVLVTGS 142

>pdb|1SNY|A Chain A, Carbonyl Reductase Sniffer Of D. Melanogaster Length = 267

Iteration: 1
 Score = 44.7 bits (104), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 37/155 (23%), Positives = 76/155 (49%), Gaps = 18/155 (11%)
Query: 34  IVTGANKGIGFALVKRLAELGLT---VILTARDVERGQRAVESLSEKGLPVNFFQLDVSD 90
           ++TG N+G+G  LVK L  L      +  T R+ E+  + +E L++    ++  ++D+ +
Sbjct: 25  LITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQA-KELEDLAKNHSNIHILEIDLRN 83
Query: 91  PSSIEAFVSWFK--SNFAALDILVNNAGVSFNDIYKNTVEHAETV--IRTNFYGAKLLTE 146
             + +  V+  +  +    L++L NNAG++        V   E +  ++TN      L +
Sbjct: 84  FDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIXLAK 143
Query: 147 SLLPLFRRSP----------SKSRILNISSRLGTL 171
           + LPL +++            ++ I+N SS LG++
Sbjct: 144 ACLPLLKKAAKANESQPXGVGRAAIINXSSILGSI 178

>pdb|3TZQ|B Chain B, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 271

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 53/230 (23%), Positives = 88/230 (38%), Gaps = 53/230 (23%)
Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           +AI+TGA  GIG    + LA  G  V+L   D+     A  + S     V+   +D+++ 
Sbjct: 13  VAIITGACGGIGLETSRVLARAGARVVLA--DLPETDLAGAAASVGRGAVHHV-VDLTNE 69
Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSFND-----IYKNTVEHAETVIRTNFYGAKLLTE 146
            S+ A + +    F  LDI+ NNA  + +D     + + TV+  +     N  G  L+ +
Sbjct: 70  VSVRALIDFTIDTFGRLDIVDNNA--AHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCK 127
Query: 147 SLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFLQSVKD 206
             +P    S     I+NISS                                        
Sbjct: 128 YAIPRL-ISAGGGAIVNISS---------------------------------------- 146
Query: 207 GTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQT 256
               +    ++ T YA +K A+   T  +A +Y   G+  N+  PG  +T
Sbjct: 147 --ATAHAAYDMSTAYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRT 194

>pdb|1X1E|A Chain A, Crystal Structure Of Tt0495 Protein From Thermus Thermophilus Hb8 Length = 239

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 59/231 (25%), Positives = 88/231 (38%), Gaps = 51/231 (22%)
Query: 30  ETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVS 89
           E  A+VTG ++GIG A+ + L   G  V + +R+ E    A +SL    LP +   L+  
Sbjct: 2   ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEE---AAQSLGAVPLPTD---LEKD 55
Query: 90  DPSSIEAFVSWFKSNFAALDILVNNAGVSFND-IYKNTVEHAETVIRTNFYGAKLLTESL 148
           DP  +   V         L +LV+ A V+      + + E    V+  +   A LL ++ 
Sbjct: 56  DPKGL---VKRALEALGGLHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAA 112
Query: 149 LPLFRRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFLQSVKDGT 208
            P    +    R+L                                     F+ SV   T
Sbjct: 113 APHMAEA-GWGRVL-------------------------------------FIGSV---T 131
Query: 209 WKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMT 259
             + G P     Y  +K AL   T  LAK +   GI VN  CPG+ +T  T
Sbjct: 132 TFTAGGPVPIPAYTTAKTALLGLTRALAKEWARLGIRVNLLCPGYVETEFT 182

>pdb|1FDW|A Chain A, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 Mutant H221q Complexed With Estradiol Length = 327

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 64/143 (44%), Gaps = 10/143 (6%)
Query: 31  TIAIVTGANKGIGFALVKRLA---ELGLTVILTARDVERGQRAVESLSEKGLP---VNFF 84
           T+ ++TG + GIG  L  RLA        V  T RD++   R  E+      P   +   
Sbjct: 3   TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETL 62
Query: 85  QLDVSDPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHA-ETVIRTNFYGAKL 143
           QLDV D  S+ A  +  +     +D+LV NAG+      +   E A  +V+  N  G   
Sbjct: 63  QLDVRDSKSVAA--ARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVR 120
Query: 144 LTESLLPLFRRSPSKSRILNISS 166
           + ++ LP  +R  S  R+L   S
Sbjct: 121 MLQAFLPDMKRRGS-GRVLVTGS 142

>pdb|2ET6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candida Tropicalis Peroxisomal Multifunctional Enzyme Type 2 Length = 604

Iteration: 1
 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 39/142 (27%), Positives = 67/142 (47%), Gaps = 6/142 (4%)
Query: 29  KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDV 88
           K+ + ++TGA  G+G    K  A+ G  V++   D +   + V+ +   G      Q DV
Sbjct: 321 KDKVVLITGAGAGLGKEYAKWFAKYGAKVVV--NDFKDATKTVDEIKAAGGEAWPDQHDV 378
Query: 89  SDPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIY-KNTVEHAETVIRTNFYGAKLLTES 147
           +  S  EA +      +  +DILVNNAG+  +  + K + +  ++V + +  G   L+  
Sbjct: 379 AKDS--EAIIKNVIDKYGTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRL 436
Query: 148 LLPLFRRSPSKSRILNISSRLG 169
             P F       RI+NI+S  G
Sbjct: 437 AWPYFVEK-QFGRIINITSTSG 457

>pdb|1FDS|A Chain A, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 Complexed With 17- Beta-Estradiol Length = 327

Iteration: 1
 Score = 44.3 bits (103), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 64/143 (44%), Gaps = 10/143 (6%)
Query: 31  TIAIVTGANKGIGFALVKRLA---ELGLTVILTARDVERGQRAVESLSEKGLP---VNFF 84
           T+ ++TG + GIG  L  RLA        V  T RD++   R  E+      P   +   
Sbjct: 3   TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETL 62
Query: 85  QLDVSDPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHA-ETVIRTNFYGAKL 143
           QLDV D  S+ A  +  +     +D+LV NAG+      +   E A  +V+  N  G   
Sbjct: 63  QLDVRDSKSVAA--ARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVR 120
Query: 144 LTESLLPLFRRSPSKSRILNISS 166
           + ++ LP  +R  S  R+L   S
Sbjct: 121 MLQAFLPDMKRRGS-GRVLVTGS 142

>pdb|3R3S|A Chain A, Structure Of The Ygha Oxidoreductase From Salmonella Enterica Length = 294

Iteration: 1
 Score = 44.3 bits (103), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 62/250 (24%), Positives = 92/250 (36%), Gaps = 50/250 (20%)
Query: 29  KETIAIVTGANKGIGFALVKRLAELGLTVILT--ARDVERGQRAVESLSEKGLPVNFFQL 86
           K+  A+VTG + GIG A     A  G  V +     + E  Q+    + E G        
Sbjct: 48  KDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPG 107
Query: 87  DVSDPSSIEAFVSWFKSNFAALDILVNNAG--VSFNDIYKNTVEHAETVIRTNFYGAKLL 144
           D+SD S   + V   +     LDIL   AG   +  +I   T E  +     N +    +
Sbjct: 108 DLSDESFARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWI 167
Query: 145 TESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFLQSV 204
           T+  +PL    P  + I+  SS                                  +Q+ 
Sbjct: 168 TQEAIPLL---PKGASIITTSS----------------------------------IQAY 190
Query: 205 KDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGS 264
                  Q  P +  DYA +K A+  Y+  LAK+   +GI VN   PG   T++ Q  G 
Sbjct: 191 -------QPSPHLL-DYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTAL-QISGG 241
Query: 265 HTADEAADVG 274
            T D+    G
Sbjct: 242 QTQDKIPQFG 251

>pdb|1EQU|A Chain A, Type 1 17-Beta Hydroxysteroid Dehydrogenase Equilin Complexed With Nadp+ Length = 327

Iteration: 1
 Score = 44.3 bits (103), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 64/143 (44%), Gaps = 10/143 (6%)
Query: 31  TIAIVTGANKGIGFALVKRLA---ELGLTVILTARDVERGQRAVESLSEKGLP---VNFF 84
           T+ ++TG + GIG  L  RLA        V  T RD++   R  E+      P   +   
Sbjct: 3   TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETL 62
Query: 85  QLDVSDPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHA-ETVIRTNFYGAKL 143
           QLDV D  S+ A  +  +     +D+LV NAG+      +   E A  +V+  N  G   
Sbjct: 63  QLDVRDSKSVAA--ARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVR 120
Query: 144 LTESLLPLFRRSPSKSRILNISS 166
           + ++ LP  +R  S  R+L   S
Sbjct: 121 MLQAFLPDMKRRGS-GRVLVTGS 142

>pdb|1FDU|A Chain A, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 Mutant H221l Complexed With Estradiol And Nadp+ Length = 327

Iteration: 1
 Score = 44.3 bits (103), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 64/143 (44%), Gaps = 10/143 (6%)
Query: 31  TIAIVTGANKGIGFALVKRLA---ELGLTVILTARDVERGQRAVESLSEKGLP---VNFF 84
           T+ ++TG + GIG  L  RLA        V  T RD++   R  E+      P   +   
Sbjct: 3   TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETL 62
Query: 85  QLDVSDPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHA-ETVIRTNFYGAKL 143
           QLDV D  S+ A  +  +     +D+LV NAG+      +   E A  +V+  N  G   
Sbjct: 63  QLDVRDSKSVAA--ARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVR 120
Query: 144 LTESLLPLFRRSPSKSRILNISS 166
           + ++ LP  +R  S  R+L   S
Sbjct: 121 MLQAFLPDMKRRGS-GRVLVTGS 142

>pdb|2DKN|A Chain A, Crystal Structure Of The 3-alpha-hydroxysteroid Dehydrogenase From Pseudomonas Sp. B-0831 Complexed With Nadh Length = 255

Iteration: 1
 Score = 44.3 bits (103), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 58/235 (24%), Positives = 92/235 (39%), Gaps = 49/235 (20%)
Query: 31  TIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSD 90
           ++  +TG+  GIG AL + LA  G TVI     ++RGQ  +E+             D+S 
Sbjct: 2   SVIAITGSASGIGAALKELLARAGHTVI----GIDRGQADIEA-------------DLST 44
Query: 91  PSSIE-AFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLL 149
           P   E A  +        LD LV  AGV        T  ++  V+  N++G   L + L 
Sbjct: 45  PGGRETAVAAVLDRCGGVLDGLVCCAGVGV------TAANSGLVVAVNYFGVSALLDGLA 98
Query: 150 PLFRRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFLQSVKDGTW 209
               R    + ++     +G+++  + P                 R + L  Q       
Sbjct: 99  EALSRGQQPAAVI-----VGSIAATQ-PGAAELPMVEAMLAGDEARAIELAEQ------- 145
Query: 210 KSQGWPEIWTDYAVSKLALNAYTMVLAKR----YEGEGISVNSYCPGFTQTSMTQ 260
             QG   +   YA SK A+      LA+R    + G G+ +N   PG  +T + Q
Sbjct: 146 --QGQTHLA--YAGSKYAVT----CLARRNVVDWAGRGVRLNVVAPGAVETPLLQ 192

>pdb|3NYW|A Chain A, Crystal Structure Of A Betaketoacyl-[acp] Reductase (Fabg) From Bacteroides Thetaiotaomicron Length = 250

Iteration: 1
 Score = 44.3 bits (103), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 37/143 (25%), Positives = 63/143 (44%), Gaps = 12/143 (8%)
Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVN---FFQLDV 88
           +AI+TGA++GIG  +   LA  G  V+L AR  +  ++  + +      V       LD+
Sbjct: 9   LAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIXRSNKHVQEPIVLPLDI 68
Query: 89  SDPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNF---YGA-KLL 144
           +D +  +  +      + A+DILVN A    +      V++   +   N    YG  K +
Sbjct: 69  TDCTKADTEIKDIHQKYGAVDILVNAAAXFXDGSLSEPVDNFRKIXEINVIAQYGILKTV 128
Query: 145 TESLLPLFRRSPSKSRILNISSR 167
           TE       +      I N++SR
Sbjct: 129 TE-----IXKVQKNGYIFNVASR 146

>pdb|4FGS|A Chain A, Crystal Structure Of A Probable Dehydrogenase Protein Length = 273

Iteration: 1
 Score = 44.3 bits (103), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 54/127 (42%), Gaps = 4/127 (3%)
Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           IA++TGA  GIG A  KR    G  V +T R   R      +++E G      Q D ++ 
Sbjct: 31  IAVITGATSGIGLAAAKRFVAEGARVFITGR---RKDVLDAAIAEIGGGAVGIQADSANL 87
Query: 92  SSIEAFVSWFKSNFAALDIL-VNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLP 150
           + ++      K+    +D+L VN  G S   + + T E  +     N  G     +  LP
Sbjct: 88  AELDRLYEKVKAEAGRIDVLFVNAGGGSXLPLGEVTEEQYDDTFDRNVKGVLFTVQKALP 147
Query: 151 LFRRSPS 157
           L  R  S
Sbjct: 148 LLARGSS 154

>pdb|1AHI|A Chain A, 7 Alpha-Hydroxysteroid Dehydrogenase Complexed With Nadh And 7-Oxo Glycochenodeoxycholic Acid Length = 255

Iteration: 1
 Score = 44.3 bits (103), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 24/84 (28%), Positives = 41/84 (48%)
Query: 33  AIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPS 92
           AI+TGA  GIG  +    A  G +V+++  + +     V+ + + G      + D++   
Sbjct: 14  AIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQ 73
Query: 93  SIEAFVSWFKSNFAALDILVNNAG 116
            + A   +  S    +DILVNNAG
Sbjct: 74  ELSALADFAISKLGKVDILVNNAG 97

>pdb|1A27|A Chain A, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 C-Terminal Deletion Mutant Complexed With Estradiol And Nadp+ Length = 289

Iteration: 1
 Score = 44.3 bits (103), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 64/143 (44%), Gaps = 10/143 (6%)
Query: 31  TIAIVTGANKGIGFALVKRLA---ELGLTVILTARDVERGQRAVESLSEKGLP---VNFF 84
           T+ ++TG + GIG  L  RLA        V  T RD++   R  E+      P   +   
Sbjct: 3   TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETL 62
Query: 85  QLDVSDPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHA-ETVIRTNFYGAKL 143
           QLDV D  S+ A  +  +     +D+LV NAG+      +   E A  +V+  N  G   
Sbjct: 63  QLDVRDSKSVAA--ARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVR 120
Query: 144 LTESLLPLFRRSPSKSRILNISS 166
           + ++ LP  +R  S  R+L   S
Sbjct: 121 MLQAFLPDMKRRGS-GRVLVTGS 142

>pdb|4FC6|A Chain A, Studies On Dcr Shed New Light On Peroxisomal Beta-Oxidation: Crystal Structure Of The Ternary Complex Of Pdcr Length = 277

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 7/95 (7%)
Query: 29  KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLS----EKGLPVNFF 84
           ++ +A +TG   GIGF + +     G   ++ +R + R   A   L+     + LP++  
Sbjct: 26  RDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLS-- 83
Query: 85  QLDVSDPSSIEAFVSWFKSNFAALDILVNNAGVSF 119
            +DV  P ++ A V      F  +DIL+N A  +F
Sbjct: 84  -MDVRAPPAVMAAVDQALKEFGRIDILINCAAGNF 117

>pdb|3QLJ|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Mycobacterium Avium Length = 322

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/164 (27%), Positives = 63/164 (38%), Gaps = 18/164 (10%)
Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILT----------ARDVERGQRAVESLSEKGLPV 81
           + IVTGA  GIG A     A  G  V++           A      Q  V+ ++  G   
Sbjct: 29  VVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEA 88
Query: 82  NFFQLDVSDPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHA-ETVIRTNFYG 140
                +V+D       +      F  LD+LVNNAG+  + +  NT E   + VI  +  G
Sbjct: 89  VADGSNVADWDQAAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKG 148
Query: 141 AKLLTESLLPLFRRSPSKS------RILNISSRLGTLSKVRNPN 178
               T      + R  SK+      RI+N SS  G    V   N
Sbjct: 149 -HFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQGSVGQGN 191

>pdb|1E3S|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh Length = 261

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/121 (25%), Positives = 54/121 (44%), Gaps = 14/121 (11%)
Query: 29  KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDV 88
           K  +A++TG   G+G +  KRL   G T +L       G+   + L    +   F   +V
Sbjct: 9   KGLVAVITGGASGLGLSTAKRLVGQGATAVLLDVPNSEGETEAKKLGGNCI---FAPANV 65
Query: 89  SDPSSIEAFVSWFKSNFAALDILVNNAGVSF---------NDIYKNTVEHAETVIRTNFY 139
           +    ++A ++  K  F  +D+ VN AG++          N ++  T+E  + VI  N  
Sbjct: 66  TSEKEVQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHEKKNQVH--TLEDFQRVINVNLI 123
Query: 140 G 140
           G
Sbjct: 124 G 124

>pdb|3ITD|A Chain A, Crystal Structure Of An Inactive 17beta-Hydroxysteroid Dehydrogenase (Y167f Mutated Form) From Fungus Cochliobolus Lunatus Length = 270

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/114 (28%), Positives = 55/114 (48%), Gaps = 8/114 (7%)
Query: 32  IAIVTGANKGIGFALVKRLAELGLTVIL----TARDVERGQRAVESLSEKGLPVNFFQLD 87
           +A+VTG+ +GIG A+   L  LG  V++    + +D E+    +++L    + +   + D
Sbjct: 20  VALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAI---KAD 76
Query: 88  VSDPSSIEAFVSWFKSNFAALDILVNNAG-VSFNDIYKNTVEHAETVIRTNFYG 140
           +     I        ++F  LDI V+N+G VSF  +   T E  + V   N  G
Sbjct: 77  IRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRG 130

>pdb|1E3W|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh And 3-Keto Butyrate Length = 261

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/121 (25%), Positives = 54/121 (44%), Gaps = 14/121 (11%)
Query: 29  KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDV 88
           K  +A++TG   G+G +  KRL   G T +L       G+   + L    +   F   +V
Sbjct: 9   KGLVAVITGGASGLGLSTAKRLVGQGATAVLLDVPNSEGETEAKKLGGNCI---FAPANV 65
Query: 89  SDPSSIEAFVSWFKSNFAALDILVNNAGVSF---------NDIYKNTVEHAETVIRTNFY 139
           +    ++A ++  K  F  +D+ VN AG++          N ++  T+E  + VI  N  
Sbjct: 66  TSEKEVQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHEKKNQVH--TLEDFQRVINVNLI 123
Query: 140 G 140
           G
Sbjct: 124 G 124

>pdb|1E6W|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh And Estradiol Length = 260

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/121 (25%), Positives = 54/121 (44%), Gaps = 14/121 (11%)
Query: 29  KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDV 88
           K  +A++TG   G+G +  KRL   G T +L       G+   + L    +   F   +V
Sbjct: 8   KGLVAVITGGASGLGLSTAKRLVGQGATAVLLDVPNSEGETEAKKLGGNCI---FAPANV 64
Query: 89  SDPSSIEAFVSWFKSNFAALDILVNNAGVSF---------NDIYKNTVEHAETVIRTNFY 139
           +    ++A ++  K  F  +D+ VN AG++          N ++  T+E  + VI  N  
Sbjct: 65  TSEKEVQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHEKKNQVH--TLEDFQRVINVNLI 122
Query: 140 G 140
           G
Sbjct: 123 G 123

>pdb|3PK0|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE SDR FROM Mycobacterium Smegmatis Length = 262

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/142 (28%), Positives = 57/142 (40%), Gaps = 5/142 (3%)
Query: 34  IVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGL-PVNFFQLDVSDPS 92
           +VTG  KGIG  +    A  G  V +  R        V  L + G   V   Q DVSD +
Sbjct: 14  VVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRA 73
Query: 93  SIEAFVSWFKSNFAALDILVNNAGVSFND--IYKNTVEHAETVIRTNFYGAKLLTESLLP 150
             +A        F  +D++  NAGV F D  +   T E    +   N  G     ++ L 
Sbjct: 74  QCDALAGRAVEEFGGIDVVCANAGV-FPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLD 132
Query: 151 LFRRSPSKSRILNISSRLGTLS 172
               S S  R++  SS  G ++
Sbjct: 133 ALIASGS-GRVVLTSSITGPIT 153

>pdb|1YB1|A Chain A, Crystal Structure Of Human 17-Beta-Hydroxysteroid Dehydrogenase Type Xi Length = 272

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/142 (24%), Positives = 61/142 (42%), Gaps = 2/142 (1%)
Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           I ++TGA  GIG       A+L   ++L   +    +         G  V+ F +D S+ 
Sbjct: 33  IVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNR 92
Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSF-NDIYKNTVEHAETVIRTNFYGAKLLTESLLP 150
             I +     K+    + ILVNNAGV + +D++       E     N       T++ LP
Sbjct: 93  EDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLP 152
Query: 151 LFRRSPSKSRILNISSRLGTLS 172
              ++ +   I+ ++S  G +S
Sbjct: 153 AMTKN-NHGHIVTVASAAGHVS 173

>pdb|1HXH|A Chain A, Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID Dehydrogenase Length = 253

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/107 (27%), Positives = 51/107 (47%), Gaps = 4/107 (3%)
Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           +A+VTG   G+G  +VK L   G  V  +  +   GQ+    L E+ +   F + DVS  
Sbjct: 8   VALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSM---FVRHDVSSE 64
Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSF-NDIYKNTVEHAETVIRTN 137
           +     ++  +     L++LVNNAG+    D+    +E    +++ N
Sbjct: 65  ADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKIN 111

>pdb|1DOH|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And 4-nitro-inden-1-one Length = 283

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 52/114 (45%), Gaps = 8/114 (7%)
Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILT-ARDVERGQRAVESLSEKGLPVNFFQLDVSD 90
           +A+VTGA +GIG  +   L   G  VI+  A   E  +  V ++ + G      + +V  
Sbjct: 31  VALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANV-- 88
Query: 91  PSSIEAFVSWFKSN---FAALDILVNNAG-VSFNDIYKNTVEHAETVIRTNFYG 140
              +E  V  F+     F  LDI+ +N+G VSF  +   T E  + V   N  G
Sbjct: 89  -GVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRG 141

>pdb|3GED|A Chain A, Fingerprint And Structural Analysis Of A Apo Scor Enzyme From Clostridium Thermocellum Length = 247

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/138 (25%), Positives = 63/138 (45%), Gaps = 15/138 (10%)
Query: 34  IVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSS 93
           IVTG   GIG  +     E G  V     D +R        +++   + +F  DV+DP +
Sbjct: 6   IVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSA----DFAKERPNLFYFHGDVADPLT 61
Query: 94  IEAFVSWFKSNFAALDILVNNA-----GVSFNDIYKNTVEHAETVIRTNFYGAKLLTESL 148
           ++ FV +       +D+LVNNA     G+  + +Y+         ++  +  ++L  + L
Sbjct: 62  LKKFVEYAMEKLQRIDVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDEL 121
Query: 149 LPLFRRSPSKSRILNISS 166
           +       +K RI+NI+S
Sbjct: 122 I------KNKGRIINIAS 133

>pdb|2WDZ|A Chain A, Crystal Structure Of The Short Chain Dehydrogenase Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter Sphaeroides In Complex With Nad+ And 1,2-Pentandiol Length = 254

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 53/234 (22%), Positives = 87/234 (37%), Gaps = 53/234 (22%)
Query: 31  TIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSD 90
             A VTGA  GIG  + +  A  G  +IL  R+     RA + L            DV+D
Sbjct: 12  ACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAA--VAARIVADVTD 69
Query: 91  PSSIEAFVSWFKSNFAALDILVNNAGVS-FNDIYKNTVEHAETVIRTN----FYGAKLLT 145
             ++ A  +      A + ILVN+AG++  +D  +        V+  N    F+ ++   
Sbjct: 70  AEAMTAAAA-EAEAVAPVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFG 128
Query: 146 ESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFLQSVK 205
            +++     +     I+N+ S  GT+                                  
Sbjct: 129 RAMV-----ARGAGAIVNLGSMSGTIVNR------------------------------- 152
Query: 206 DGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMT 259
                    P+  + Y  SK A++  T  LA  + G G+ VN+  PG+  T MT
Sbjct: 153 ---------PQFASSYMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMT 197

>pdb|3I4F|A Chain A, Structure Of Putative 3-oxoacyl-reductase From Bacillus Thuringiensis Length = 264

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 7/136 (5%)
Query: 33  AIVTGANKGIGFALVKRLAELGLTVILTAR-DVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           A++T   KG+G  + ++L   G +V +T   D    +   E+  +    + F Q DV+  
Sbjct: 10  ALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKK 69
Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAE----TVIRTNFYGAKLLTES 147
             +   V    S+F  +D L+NNAG    +  K  V++ E     +I+ N      L + 
Sbjct: 70  EDLHKIVEEAMSHFGKIDFLINNAGPYVFE-RKKLVDYEEDEWNEMIQGNLTAVFHLLKL 128
Query: 148 LLPLFRRSPSKSRILN 163
           ++P+ R+  +  RI+N
Sbjct: 129 VVPVMRKQ-NFGRIIN 143

>pdb|1YBV|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And An Active Site Inhibitor Length = 283

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 52/114 (45%), Gaps = 8/114 (7%)
Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILT-ARDVERGQRAVESLSEKGLPVNFFQLDVSD 90
           +A+VTGA +GIG  +   L   G  VI+  A   E  +  V ++ + G      + +V  
Sbjct: 31  VALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANV-- 88
Query: 91  PSSIEAFVSWFKSN---FAALDILVNNAG-VSFNDIYKNTVEHAETVIRTNFYG 140
              +E  V  F+     F  LDI+ +N+G VSF  +   T E  + V   N  G
Sbjct: 89  -GVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRG 141

>pdb|3IOY|A Chain A, Structure Of Putative Short-Chain Dehydrogenase (Saro_0793) From Novosphingobium Aromaticivorans Length = 319

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 54/111 (48%), Gaps = 3/111 (2%)
Query: 33  AIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGL--PVNFFQLDVSD 90
           A VTG   G+G  LV++L   G  V +     +   +A+ +L  +G    V   QLDV+ 
Sbjct: 11  AFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVAS 70
Query: 91  PSSIEAFVSWFKSNFAALDILVNNAGVS-FNDIYKNTVEHAETVIRTNFYG 140
               +      ++ F  + IL NNAGV+ F  I +++ +  + ++  N +G
Sbjct: 71  REGFKMAADEVEARFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHG 121

>pdb|1IY8|A Chain A, Crystal Structure Of Levodione Reductase Length = 267

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 64/149 (42%), Gaps = 6/149 (4%)
Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQL--DVS 89
           + ++TG   G+G A   RLA  G  + L     E  + +  ++ E            DVS
Sbjct: 15  VVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVS 74
Query: 90  DPSSIEAFVSWFKSNFAALDILVNNAGVSF--NDIYKNTVEHAETVIRTNFYGAKLLTES 147
           D + +EA+V+     F  +D   NNAG+    N     T    + V+  N  G  L  E 
Sbjct: 75  DEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEK 134
Query: 148 LLPLFRRSPSKSRILNISSRLGTLSKVRN 176
           +L + R   S   ++N +S +G +  + N
Sbjct: 135 VLKIMREQGS-GMVVNTAS-VGGIRGIGN 161

>pdb|3TL3|A Chain A, Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Ulcerans Length = 257

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 7/88 (7%)
Query: 29  KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDV 88
           ++ +A+VTG   G+G A  KRL + G  V++   D+ RG+  V  L ++     F   DV
Sbjct: 8   RDAVAVVTGGASGLGLATTKRLLDAGAQVVVL--DI-RGEDVVADLGDR---ARFAAADV 61
Query: 89  SDPSSIEAFVSWFKSNFAALDILVNNAG 116
           +D +++ + +   ++    L I+VN AG
Sbjct: 62  TDEAAVASALDLAET-MGTLRIVVNCAG 88

>pdb|2O23|A Chain A, The Structure Of Wild-Type Human Hadh2 (17beta-Hydroxysteroid Dehydrogenase Type 10) Bound To Nad+ At 1.2 A Length = 265

Iteration: 1
 Score = 41.2 bits (95), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 29/119 (24%), Positives = 51/119 (42%), Gaps = 10/119 (8%)
Query: 29  KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDV 88
           K  +A++TG   G+G A  +RL   G + +L       G+   + L    +   F   DV
Sbjct: 11  KGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCV---FAPADV 67
Query: 89  SDPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKN-------TVEHAETVIRTNFYG 140
           +    ++  ++  K  F  +D+ VN AG++      N       T+E  + V+  N  G
Sbjct: 68  TSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMG 126

>pdb|2QQ5|A Chain A, Crystal Structure Of Human Sdr Family Member 1 Length = 260

Iteration: 1
 Score = 41.2 bits (95), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 9/89 (10%)
Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVER----GQRAVESLSEKGLPVNFFQLD 87
           + +VTGA++GIG  +  +L + G TV +T R ++      Q A +SL  + +PV     D
Sbjct: 7   VCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEA-QSLGGQCVPV---VCD 62
Query: 88  VSDPSSIEA-FVSWFKSNFAALDILVNNA 115
            S  S + + F    +     LD+LVNNA
Sbjct: 63  SSQESEVRSLFEQVDREQQGRLDVLVNNA 91

>pdb|3UN1|A Chain A, Crystal Structure Of An Oxidoreductase From Sinorhizobium Meliloti 1021 Length = 260

Iteration: 1
 Score = 41.2 bits (95), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 52/231 (22%), Positives = 90/231 (38%), Gaps = 53/231 (22%)
Query: 28  SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLP-VNFFQL 86
           +++ + ++TGA++GIG  LV+   +    V+ T+R          S+     P ++    
Sbjct: 26  NQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSR----------SIKPSADPDIHTVAG 75
Query: 87  DVSDPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIY-KNTVEHAETVIRTNFYGAKLLT 145
           D+S P + +  V      F  +D LVNNAGV     + + T E  +  +  N  G   +T
Sbjct: 76  DISKPETADRIVREGIERFGRIDSLVNNAGVFLAKPFVEXTQEDYDHNLGVNVAGFFHIT 135
Query: 146 ESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKXXXXXXXXXXXXXXRFVGLFLQSVK 205
           +       +  S   I++I++ L     V  P +                          
Sbjct: 136 QRAAAEXLKQGS-GHIVSITTSL-----VDQPXV-------------------------- 163
Query: 206 DGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQT 256
                  G P      +++K  LNA T  LA  +   G+ VN+  PG  +T
Sbjct: 164 -------GXPSALA--SLTKGGLNAVTRSLAXEFSRSGVRVNAVSPGVIKT 205

>pdb|1SO8|A Chain A, Abeta-bound Human Abad Structure [also Known As 3-hydroxyacyl-coa Dehydrogenase Type Ii (type Ii Hadh), Endoplasmic Reticulum- Associated Amyloid Beta-peptide Binding Protein (erab)] Length = 261

Iteration: 1
 Score = 41.2 bits (95), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 29/119 (24%), Positives = 51/119 (42%), Gaps = 10/119 (8%)
Query: 29  KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDV 88
           K  +A++TG   G+G A  +RL   G + +L       G+   + L    +   F   DV
Sbjct: 9   KGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCV---FAPADV 65
Query: 89  SDPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKN-------TVEHAETVIRTNFYG 140
           +    ++  ++  K  F  +D+ VN AG++      N       T+E  + V+  N  G
Sbjct: 66  TSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMG 124

>pdb|3F1K|A Chain A, Crystal Structure Of Ycik From E. Coli, An Oxidoreductase, Complexed With Nadp+ At 2.6a Resolution Length = 252

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 3/91 (3%)
Query: 30  ETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEK-GLPVNFFQLDV 88
           + I +VTGA+ GIG       A  G TVIL  R+ E+ ++    ++E+ G    +F LD+
Sbjct: 12  DRIILVTGASDGIGREAAXTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDL 71
Query: 89  SDPSS--IEAFVSWFKSNFAALDILVNNAGV 117
              +S   +        N+  LD +++NAG+
Sbjct: 72  LTCTSENCQQLAQRIAVNYPRLDGVLHNAGL 102

>pdb|1U7T|A Chain A, Crystal Structure Of AbadHSD10 WITH A BOUND INHIBITOR Length = 261

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 29/119 (24%), Positives = 51/119 (42%), Gaps = 10/119 (8%)
Query: 29  KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDV 88
           K  +A++TG   G+G A  +RL   G + +L       G+   + L    +   F   DV
Sbjct: 9   KGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCV---FAPADV 65
Query: 89  SDPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKN-------TVEHAETVIRTNFYG 140
           +    ++  ++  K  F  +D+ VN AG++      N       T+E  + V+  N  G
Sbjct: 66  TSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMG 124

>pdb|3GAF|A Chain A, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid Dehydrogenase From Brucella Melitensis Length = 256

Iteration: 1
 Score = 40.8 bits (94), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 40/146 (27%), Positives = 68/146 (46%), Gaps = 1/146 (0%)
Query: 30  ETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVS 89
           + +AIVTGA  GIG A+    A+ G +V++T    E  +    ++ + G      + +V+
Sbjct: 12  DAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVT 71
Query: 90  DPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLL 149
           D    EA +      F  + +LVNNAG      +   +   E   + N +    L++   
Sbjct: 72  DEQHREAVIKAALDQFGKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAA 131
Query: 150 PLFRRSPSKSRILNISSRLGTLSKVR 175
           P  +++   + ILNISS  G  + VR
Sbjct: 132 PHMQKAGGGA-ILNISSMAGENTNVR 156

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	302
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	1e-100
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	1e-93
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	5e-56
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	5e-52
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	6e-45
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	4e-43
1xq1_A	266	Putative tropinone reducatse; structural genomics,	1e-42
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	2e-42
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	2e-42
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	2e-42
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	2e-42
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	4e-42
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	4e-42
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	5e-42
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	1e-41
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	1e-41
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	1e-41
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	1e-41
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	6e-41
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	7e-41
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	9e-41
1xkq_A	280	Short-chain reductase family member (5D234); parra	1e-40
1spx_A	278	Short-chain reductase family member (5L265); paral	1e-40
1xhl_A	297	Short-chain dehydrogenase/reductase family member	2e-40
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	7e-40
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	1e-39
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	1e-39
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	2e-39
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	2e-39
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	2e-39
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	2e-39
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	2e-39
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	2e-39
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	3e-39
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	3e-39
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	6e-39
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	6e-39
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	6e-39
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	9e-39
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	1e-38
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	2e-38
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	2e-38
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	2e-38
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	3e-38
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	3e-38
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	3e-38
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	3e-38
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	4e-38
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	4e-38
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	5e-38
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	5e-38
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	6e-38
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	6e-38
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	7e-38
4dqx_A	277	Probable oxidoreductase protein; structural genomi	1e-37
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	1e-37
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	1e-37
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	2e-37
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	2e-37
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	2e-37
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	2e-37
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	2e-37
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-37
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	2e-37
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	3e-37
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	3e-37
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	3e-37
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	7e-37
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	7e-37
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	8e-37
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	9e-37
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	9e-37
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	1e-36
3imf_A	257	Short chain dehydrogenase; structural genomics, in	1e-36
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	2e-36
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	3e-36
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	3e-36
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	3e-36
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	4e-36
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	4e-36
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	6e-36
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	6e-36
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	7e-36
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	8e-36
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	1e-35
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	1e-35
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	1e-35
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	1e-35
3cxt_A	291	Dehydrogenase with different specificities; rossma	2e-35
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	2e-35
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	4e-35
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	4e-35
3rih_A	293	Short chain dehydrogenase or reductase; structural	5e-35
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	6e-35
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	8e-35
4e4y_A	244	Short chain dehydrogenase family protein; structur	9e-35
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	1e-34
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	1e-34
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	2e-34
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	2e-34
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	2e-34
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	4e-34
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	4e-34
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	4e-34
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	4e-34
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	4e-34
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	4e-34
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	4e-34
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	7e-34
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	7e-34
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	1e-33
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	1e-33
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	3e-33
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	5e-33
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	6e-33
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	7e-33
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	8e-33
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	9e-33
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	2e-32
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	2e-32
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	2e-32
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	2e-32
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	3e-32
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	3e-32
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	4e-32
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	4e-32
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	6e-32
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	6e-32
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	1e-31
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	2e-31
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	2e-31
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	3e-31
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	4e-31
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	5e-31
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	5e-31
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	8e-31
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	8e-31
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	2e-30
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	2e-30
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	2e-30
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	3e-30
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	4e-30
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	5e-30
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	6e-30
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	6e-30
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	9e-30
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	1e-29
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	3e-29
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	5e-29
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	6e-29
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	1e-28
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	2e-28
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	3e-28
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	6e-28
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	8e-28
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	1e-27
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	2e-27
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	2e-27
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	3e-27
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	5e-27
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	8e-27
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	1e-26
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	2e-26
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	2e-26
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	2e-26
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	1e-25
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	2e-25
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	2e-25
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	3e-25
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	3e-25
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	3e-25
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	1e-24
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	2e-24
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	7e-24
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	9e-24
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	1e-23
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	2e-23
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	3e-23
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	2e-22
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	6e-22
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	2e-21
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	6e-20
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	7e-15
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	1e-13
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	9e-12
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	3e-13
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	6e-13
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	3e-12
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	5e-07
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	2e-06
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	1e-05
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	2e-05
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	2e-05
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	4e-05
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	4e-05
4alk_A	282	ENR, enoyl-[acyl-carrier-protein] reductase [NADPH	5e-05
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	5e-05
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	5e-05
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	5e-05
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	6e-05
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	6e-05
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	7e-05
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	2e-04
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	3e-04
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	4e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-04
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	5e-04
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	5e-04
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	6e-04

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* Length = 276

 Score =  294 bits (754), Expect = e-100
 Identities = 89/272 (32%), Positives = 146/272 (53%), Gaps = 13/272 (4%)

Query: 28  SKETIAIVTGANKGIGFALVKRLAEL-GLTVILTARDVERGQRAVESLSEKGLPVNFFQL 86
           S   +A+VTG NKGIG A+V+ L  L    V+LTARDV RGQ AV+ L  +GL   F QL
Sbjct: 2   SGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQL 61

Query: 87  DVSDPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKN-TVEHAETVIRTNFYGAKLLT 145
           D+ D  SI A   + +  +  LD+LVNNAG++F           AE  ++TNF+G + + 
Sbjct: 62  DIDDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVC 121

Query: 146 ESLLPLFRRSPSKSRILNISSRLGTLSKVRNPN-IKSILEDEELSEEQIERFVGLFLQSV 204
             LLPL +      R++N+SS +   +       ++     E ++EE++   +  F++  
Sbjct: 122 TELLPLIKPQG---RVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDT 178

Query: 205 KDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRY----EGEGISVNSYCPGFTQTSMTQ 260
           K G  + +GWP   + Y V+K+ +   + + A++     +G+ I +N+ CPG+ +T M  
Sbjct: 179 KKGVHQKEGWP--SSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAG 236

Query: 261 GQGSHTADEAADVGARLLLLHPQ-QLPTAKFY 291
            + + + +E A+    L LL P  + P  +F 
Sbjct: 237 PKATKSPEEGAETPVYLALLPPDAEGPHGQFV 268

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} Length = 311

 Score =  279 bits (714), Expect = 1e-93
 Identities = 111/298 (37%), Positives = 156/298 (52%), Gaps = 38/298 (12%)

Query: 28  SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLP-VNFFQL 86
           +K   A+VTG NKGIGF + K+L+  G+ V+LT RDV +G  AVE L       V F QL
Sbjct: 10  TKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQL 69

Query: 87  DVSDP-SSIEAFVSWFKSNFAALDILVNNAGVSF-------------------------- 119
           DV+DP +++ +   + K++F  LDILVNNAGV+                           
Sbjct: 70  DVTDPIATMSSLADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIY 129

Query: 120 -----NDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKV 174
                 ++   T E AE  ++ N+ G K +TE L+PL + S S  RI+N+SS  G+L  V
Sbjct: 130 EKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQLSDS-PRIVNVSSSTGSLKYV 188

Query: 175 RNPNIKSILEDEE-LSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTM 233
            N     IL D + L+EE+I+  V + L+  K+   ++ GWP     Y  SK  LNAYT 
Sbjct: 189 SNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAYTR 248

Query: 234 VLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTADEAADVGARLLLLHPQQLPTAKFY 291
           VLA +       VN  CPG  +T M  G G++TA+E A+   R+ L  P   P+  FY
Sbjct: 249 VLANKI--PKFQVNCVCPGLVKTEMNYGIGNYTAEEGAEHVVRIALF-PDDGPSGFFY 303

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250

 Score =  180 bits (459), Expect = 5e-56
 Identities = 67/277 (24%), Positives = 107/277 (38%), Gaps = 55/277 (19%)

Query: 31  TIAIVTGANKGIGFALVKRLAELGLT--VILTARDVERGQRAVESLSEKGLPVNFFQLDV 88
              +VTGAN+GIG  LV++L +      +I TARDVE+          K   V+   L V
Sbjct: 4   GSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKS---IKDSRVHVLPLTV 60

Query: 89  SDPSSIEAFVSWFKSNFA--ALDILVNNAGVS--FNDIYKNTVEHAETVIRTNFYGAKLL 144
           +   S++ FVS          L +L+NNAGV   +    +         +  N     LL
Sbjct: 61  TCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLL 120

Query: 145 TESLLPLFRRSPSK----------SRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIE 194
           T+ LLPL + + SK          + ++ ISS LG                         
Sbjct: 121 TQKLLPLLKNAASKESGDQLSVSRAAVITISSGLG------------------------- 155

Query: 195 RFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFT 254
                   S+ D T  S         Y +SK A+N +   LA   + + + V ++CPG+ 
Sbjct: 156 --------SITDNT--SGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWV 205

Query: 255 QTSMTQGQGSHTADEAADVGARLLLLHPQQLPTAKFY 291
           QT++     + T +++                  +F+
Sbjct: 206 QTNLGGKNAALTVEQSTAELISSFNKLDNS-HNGRFF 241

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267

 Score =  171 bits (434), Expect = 5e-52
 Identities = 57/292 (19%), Positives = 104/292 (35%), Gaps = 61/292 (20%)

Query: 17  SSSLVSSTKWWSKETIAIVTGANKGIGFALVKRLAEL---GLTVILTARDVERGQRAVES 73
           SS LV      S     ++TG N+G+G  LVK L  L      +  T R+ E+ +  +E 
Sbjct: 11  SSGLVPRG---SHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAK-ELED 66

Query: 74  LSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF--AALDILVNNAGVS--FNDIYKNTVEH 129
           L++    ++  ++D+ +  + +  V+  +       L++L NNAG++     I     + 
Sbjct: 67  LAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQE 126

Query: 130 AETVIRTNFYGAKLLTESLLPLFRRSPSK----------SRILNISSRLGTLSKVRNPNI 179
               ++TN     +L ++ LPL +++             + I+N+SS LG++    +   
Sbjct: 127 LLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGG- 185

Query: 180 KSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRY 239
                                                    Y  SK ALNA T  L+   
Sbjct: 186 --------------------------------------MYAYRTSKSALNAATKSLSVDL 207

Query: 240 EGEGISVNSYCPGFTQTSMTQGQGSHTADEAADVGARLLLLHPQQLPTAKFY 291
             + I   S  PG+ +T M           +        +    +     F 
Sbjct: 208 YPQRIMCVSLHPGWVKTDMGGSSAPLDVPTSTG-QIVQTISKLGEKQNGGFV 258

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 Length = 273

 Score =  152 bits (387), Expect = 6e-45
 Identities = 69/253 (27%), Positives = 102/253 (40%), Gaps = 46/253 (18%)

Query: 12  SSSSSSSSLVSSTKWWS-KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRA 70
             S  S    ++   WS K T A+VTG +KGIG+A+V+ LA LG  V   +R+ +     
Sbjct: 2   EESKVSMMNCNNEGRWSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDEC 61

Query: 71  VESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA-ALDILVNNAGVS-FNDIYKNTVE 128
           +E   EKGL V     D+   +  +  +      F   L+ILVNNAGV    +    T +
Sbjct: 62  LEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEK 121

Query: 129 HAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEEL 188
               ++ TNF  A  L++   PL + S     ++ +SS  G                   
Sbjct: 122 DYNIIMGTNFEAAYHLSQIAYPLLKAS-QNGNVIFLSSIAG------------------- 161

Query: 189 SEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNS 248
                  F  L   S+                Y+ SK A+N  T  LA  +  + I VNS
Sbjct: 162 -------FSALPSVSL----------------YSASKGAINQMTKSLACEWAKDNIRVNS 198

Query: 249 YCPGFTQTSMTQG 261
             PG   T + + 
Sbjct: 199 VAPGVILTPLVET 211

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} Length = 273

 Score =  148 bits (375), Expect = 4e-43
 Identities = 54/252 (21%), Positives = 84/252 (33%), Gaps = 49/252 (19%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           IA++TGA  GIG A  KR    G  V +T R  +    A+  +   G      Q D ++ 
Sbjct: 31  IAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI---GGGAVGIQADSANL 87

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVS-FNDIYKNTVEHAETVIRTNFYGAKLLTESLLP 150
           + ++      K+    +D+L  NAG      + + T E  +     N  G     +  LP
Sbjct: 88  AELDRLYEKVKAEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALP 147

Query: 151 LFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWK 210
           L  R    S ++   S  G+                           G    SV      
Sbjct: 148 LLARG---SSVVLTGSTAGS--------------------------TGTPAFSV------ 172

Query: 211 SQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTADEA 270
                     YA SK AL ++        +  GI +N+  PG T+T+           + 
Sbjct: 173 ----------YAASKAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAGKDPVQQ 222

Query: 271 ADVGARLLLLHP 282
             +   L    P
Sbjct: 223 QGLLNALAAQVP 234

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A Length = 266

 Score =  146 bits (371), Expect = 1e-42
 Identities = 59/252 (23%), Positives = 85/252 (33%), Gaps = 46/252 (18%)

Query: 22  SSTKWWS-KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLP 80
             ++ WS K    +VTG  KGIG A+V+  A  G  +   AR+       +    +KG  
Sbjct: 5   EQSQRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQ 64

Query: 81  VNFFQLDVSDPSSIEAFVSWFKSNF-AALDILVNNAGVS-FNDIYKNTVEHAETVIRTNF 138
           V     D S     E  +    S F   LDIL+NN G          T E     I TN 
Sbjct: 65  VTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNL 124

Query: 139 YGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVG 198
             A  L++   PL + S     I+ +SS  G                           V 
Sbjct: 125 ESAYHLSQLAHPLLKAS-GCGNIIFMSSIAG--------------------------VVS 157

Query: 199 LFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSM 258
             + S+                Y+ +K ALN     LA  +  +GI  N+  P    T +
Sbjct: 158 ASVGSI----------------YSATKGALNQLARNLACEWASDGIRANAVAPAVIATPL 201

Query: 259 TQGQGSHTADEA 270
            +        + 
Sbjct: 202 AEAVYDDEFKKV 213

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* Length = 260

 Score =  146 bits (370), Expect = 2e-42
 Identities = 56/234 (23%), Positives = 95/234 (40%), Gaps = 51/234 (21%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
            A+VTG ++GIG+ +V+ LA LG +V   +R+ +     +     KG  V     D+S  
Sbjct: 11  TALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSR 70

Query: 92  SSIEAFVSWFKSNFA-ALDILVNNAGVSFNDIYKNTVEHAE----TVIRTNFYGAKLLTE 146
           S  +  ++   ++F   L+ILVNNAG+    IYK   ++       ++  NF  A  L+ 
Sbjct: 71  SERQELMNTVANHFHGKLNILVNNAGIV---IYKEAKDYTVEDYSLIMSINFEAAYHLSV 127

Query: 147 SLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKD 206
              P  + S  +  ++ ISS  G                           + +  ++V  
Sbjct: 128 LAHPFLKAS-ERGNVVFISSVSG--------------------------ALAVPYEAV-- 158

Query: 207 GTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ 260
                         Y  +K A++  T  LA  +  + I VN   PG   TS+ +
Sbjct: 159 --------------YGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVE 198

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} Length = 247

 Score =  145 bits (368), Expect = 2e-42
 Identities = 56/235 (23%), Positives = 82/235 (34%), Gaps = 49/235 (20%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLP---VNFFQLDV 88
           + +VTGA +GIG A  +  A  G +V+L  R         + +   G P   +    L+ 
Sbjct: 16  VILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLEN 75

Query: 89  SDPSSIEAFVSWFKSNFAALDILVNNAGV--SFNDIYKNTVEHAETVIRTNFYGAKLLTE 146
           +         +  +  F  LD L++NA +      + +   E    V+  N     +LT 
Sbjct: 76  ATAQQYRELAARVEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTR 135

Query: 147 SLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKD 206
           +LLPL +RS   + I   SS                              VG        
Sbjct: 136 ALLPLLKRSED-ASIAFTSS-----------------------------SVGR------- 158

Query: 207 GTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGE-GISVNSYCPGFTQTSMTQ 260
                +G    W  Y VSK A       LA   EG   +  NS  PG T+T M  
Sbjct: 159 -----KGRAN-WGAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTGMRA 207

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* Length = 259

 Score =  145 bits (368), Expect = 2e-42
 Identities = 56/266 (21%), Positives = 88/266 (33%), Gaps = 60/266 (22%)

Query: 32  IAIVTGANKGIGFALVKRLAEL---GLTVILTARDVERGQRAVESLSEK--GLPVNFFQL 86
           + ++TGA++G G AL  +LA L   G  ++++AR     ++  E L  +   L V     
Sbjct: 8   VCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAA 67

Query: 87  DVSDPSSIEAFVS----WFKSNFAALDILVNNAGV----SFNDIYKNTVEHAETVIRTNF 138
           D+   + ++  +S      +       +L+NNA      S   +  N +         N 
Sbjct: 68  DLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNL 127

Query: 139 YGAKLLTESLLPLFRRSPSKS-RILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFV 197
                LT   L  F+ SP  S  ++NISS                               
Sbjct: 128 TSMLCLTSGTLNAFQDSPGLSKTVVNISSLCAL--------------------------- 160

Query: 198 GLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTS 257
                         Q +   W  Y   K A +    VLA   E   + V SY PG     
Sbjct: 161 --------------QPYKG-WGLYCAGKAARDMLYQVLAA--EEPSVRVLSYAPGPLDND 203

Query: 258 MTQGQGSHTADEAADVGARLLLLHPQ 283
           M Q     + D      ++L  L   
Sbjct: 204 MQQLARETSKDPELR--SKLQKLKSD 227

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A Length = 255

 Score =  145 bits (368), Expect = 2e-42
 Identities = 64/252 (25%), Positives = 87/252 (34%), Gaps = 50/252 (19%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
            AIV G   G+G A V+RL E G  V+LT R+     R  E    +   +   + D++D 
Sbjct: 10  KAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHAL---RSDIADL 66

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVS-FNDIYKNTVEHAETVIRTNFYGAKLLTESLLP 150
           + I    +       A+D+L  NAGVS      + +    +     N  GA    + L P
Sbjct: 67  NEIAVLGAAAGQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTP 126

Query: 151 LFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWK 210
           L R       I+  SS                               G    SV      
Sbjct: 127 LIREG---GSIVFTSSVADE--------------------------GGHPGMSV------ 151

Query: 211 SQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTADEA 270
                     Y+ SK AL ++  VLA      GI VNS  PGF  T      G  T  E 
Sbjct: 152 ----------YSASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGI-TEAER 200

Query: 271 ADVGARLLLLHP 282
           A+       + P
Sbjct: 201 AEFKTLGDNITP 212

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235

 Score =  144 bits (365), Expect = 4e-42
 Identities = 41/254 (16%), Positives = 78/254 (30%), Gaps = 54/254 (21%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
             IVTGA  G+G AL   L E G  V +  R  +R Q+    L    + +     D++  
Sbjct: 5   HIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGNAVIGI---VADLAHH 61

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVS-FNDIYKNTVEHAETVIRTNFYGAKLLTESLLP 150
             ++   +         +++++ AG   F  +   T E    V+ +N     L+ +  + 
Sbjct: 62  EDVDVAFAAAVEWGGLPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVR 121

Query: 151 LFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWK 210
           L         + N+ S      +V   N                       +S+      
Sbjct: 122 LIGE--RGGVLANVLSSAA---QVGKAN-----------------------ESL------ 147

Query: 211 SQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSH----- 265
                     Y  SK  +  +   L    +   + + +  P   ++              
Sbjct: 148 ----------YCASKWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEFWDNTDHVDPSGF 197

Query: 266 -TADEAADVGARLL 278
            T ++AA      L
Sbjct: 198 MTPEDAAAYMLDAL 211

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} Length = 301

 Score =  145 bits (369), Expect = 4e-42
 Identities = 43/246 (17%), Positives = 74/246 (30%), Gaps = 43/246 (17%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
            A+VTG   GIG A     A  G  ++L+  D    ++AV  L  +G   +    DV   
Sbjct: 33  AAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHL 92

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLP 150
             +             +D++ +NAG+     + +   +    VI  + +G+    E+ LP
Sbjct: 93  DEMVRLADEAFRLLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLP 152

Query: 151 LFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWK 210
                 +   I   +S  G                           V             
Sbjct: 153 RLLEQGTGGHIAFTASFAG--------------------------LVPNAGLGT------ 180

Query: 211 SQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTADEA 270
                     Y V+K  +      LA+  +  GI V+  CP   +T +          + 
Sbjct: 181 ----------YGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKLVSNSERIRGADY 230

Query: 271 ADVGAR 276
                 
Sbjct: 231 GMSATP 236

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} Length = 263

 Score =  145 bits (367), Expect = 5e-42
 Identities = 63/241 (26%), Positives = 92/241 (38%), Gaps = 46/241 (19%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
            AIVTG +KGIG A+ + L + G TV +   DV   Q  V  L   G  V   ++DV+  
Sbjct: 14  KAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAV---EVDVTKR 70

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVS-FNDIYKNTVEHAETVIRTNFYGAKLLTESLLP 150
           +S++A +          D+L  NAGVS        T E  +     N  G  L  +    
Sbjct: 71  ASVDAAMQKAIDALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACR 130

Query: 151 LFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWK 210
            F  S +K  I+N +S                              VG  L +       
Sbjct: 131 HFLASNTKGVIVNTASLAA--------------------------KVGAPLLAH------ 158

Query: 211 SQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTADEA 270
                     Y+ SK A+  +T  LA+    + I VN  CPGF +T+M + +    A+  
Sbjct: 159 ----------YSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELR 208

Query: 271 A 271
            
Sbjct: 209 G 209

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* Length = 263

 Score =  143 bits (364), Expect = 1e-41
 Identities = 58/240 (24%), Positives = 87/240 (36%), Gaps = 45/240 (18%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEK-GLPVNFFQLDVSD 90
           +A++TG++ GIG A+ +  A+ G  ++L AR V+R   A  SL EK G+ V    +DV+ 
Sbjct: 9   VAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVAT 68

Query: 91  PSSIEAFVSWFKSNFAALDILVNNAGVS-FNDIYKNTVEHAETVIRTNFYGAKLLTESLL 149
           P  ++A V   +S+F   DILVNNAG      I +   E  +         A  L   L+
Sbjct: 69  PEGVDAVVESVRSSFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLV 128

Query: 150 PLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTW 209
           P  R       I++ +S                                           
Sbjct: 129 PGMRARGG-GAIIHNASICA---VQPLWYE------------------------------ 154

Query: 210 KSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTADE 269
                      Y V+K AL  ++  LA     + I VN   PG   T            +
Sbjct: 155 ---------PIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKTAKELTKD 205

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} Length = 266

 Score =  144 bits (365), Expect = 1e-41
 Identities = 55/231 (23%), Positives = 82/231 (35%), Gaps = 44/231 (19%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEK-GLPVNFFQLDVSD 90
            A++TGA KGIG  + +  A  G  ++L+ RDV     A  +L E+ G  V+   +D+++
Sbjct: 22  RALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAE 81

Query: 91  PSSIEAFVSWFKSNFAALDILVNNAGVS-FNDIYKNTVEHAETVIRTNFYGAKLLTESLL 149
           P +           F  LD+LVNNAG+S    +     +  +  I  N     LL  ++ 
Sbjct: 82  PDAPAELARRAAEAFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVG 141

Query: 150 PLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTW 209
                +     I+ ++S                                L          
Sbjct: 142 KAMVAAGEGGAIITVASAAA--------------------------LAPLPDHYA----- 170

Query: 210 KSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ 260
                      Y  SK  L   T VLA+     GI  NS CP    T M Q
Sbjct: 171 -----------YCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQ 210

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 Length = 256

 Score =  143 bits (363), Expect = 1e-41
 Identities = 57/231 (24%), Positives = 90/231 (38%), Gaps = 43/231 (18%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           +A+VTGA +GIG A+  RL + G  V +   +    +     +++ G      ++DVSD 
Sbjct: 4   VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDR 63

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVS-FNDIYKNTVEHAETVIRTNFYGAKLLTESLLP 150
             + A V   +      D++VNNAGV+    I   T E  + V   N  G     ++ + 
Sbjct: 64  DQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVE 123

Query: 151 LFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWK 210
            F++     +I+N  S+ G                           VG    +V      
Sbjct: 124 AFKKEGHGGKIINACSQAG--------------------------HVGNPELAV------ 151

Query: 211 SQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG 261
                     Y+ SK A+   T   A+     GI+VN YCPG  +T M   
Sbjct: 152 ----------YSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAE 192

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} Length = 264

 Score =  143 bits (363), Expect = 1e-41
 Identities = 52/257 (20%), Positives = 89/257 (34%), Gaps = 50/257 (19%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           + +++G    +G  L +R AE G  ++L AR VER +   + +++ G        D++D 
Sbjct: 13  VVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDD 72

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGV--SFNDIYKNTVEHAETVIRTNFYGAKLLTESLL 149
           + +   V      +  +D+++NNA    S       T EH    I    +GA  L +   
Sbjct: 73  AQVAHLVDETMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFT 132

Query: 150 PLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTW 209
           P      SK  ++N++S +   S                                     
Sbjct: 133 PALEE--SKGAVVNVNSMVVRHS---QAKY------------------------------ 157

Query: 210 KSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTADE 269
                      Y ++K AL A +  LA     +GI VNS  PG+      +    H A +
Sbjct: 158 ---------GAYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGK 208

Query: 270 AA----DVGARLLLLHP 282
                 D+         
Sbjct: 209 YGTSVEDIYNAAAAGSD 225

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* Length = 265

 Score =  141 bits (359), Expect = 6e-41
 Identities = 49/247 (19%), Positives = 85/247 (34%), Gaps = 46/247 (18%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEK--GLPVNFFQLDVS 89
           +A+VTG + GIG A V+ L E G  V   ARD ER + A  +L ++  G  +     DV 
Sbjct: 10  VAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVL 69

Query: 90  DPSSIEAFVSWFKSNFAALDILVNNAGVS-FNDIYKNTVEHAETVIRTNFYGAKLLTESL 148
           D   + AF    +       ILVNNAG    +   + T E     ++  F+       + 
Sbjct: 70  DALQVRAFAEACERTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAF 129

Query: 149 LPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGT 208
           LP        + I+ ++S L +                                      
Sbjct: 130 LPQLESRAD-AAIVCVNSLLAS-------------------------------------- 150

Query: 209 WKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTAD 268
              Q  P +    + ++  +      +A  +  +G+ VN    G  ++   + +     +
Sbjct: 151 ---QPEPHM-VATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREE 206

Query: 269 EAADVGA 275
              D   
Sbjct: 207 RELDWAQ 213

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} Length = 291

 Score =  142 bits (361), Expect = 7e-41
 Identities = 69/272 (25%), Positives = 110/272 (40%), Gaps = 53/272 (19%)

Query: 27  WSKETI-------AIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGL 79
           W+   +        ++TGAN G+G    + LA  G TVI+  RD  +G+ A  +++ +  
Sbjct: 6   WTAADLPSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQ-- 63

Query: 80  PVNFFQLDVSDPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFY 139
            V   +LD+ D SS+  F        +  D+L+NNAG+     Y  TV+  E+ I TN  
Sbjct: 64  -VEVRELDLQDLSSVRRFA----DGVSGADVLINNAGIMAVP-YALTVDGFESQIGTNHL 117

Query: 140 GAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGL 199
           G   LT  LLP         R++ +SS      ++        LED              
Sbjct: 118 GHFALTNLLLPRL-----TDRVVTVSSMAHWPGRIN-------LED-------------- 151

Query: 200 FLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYC--PGFTQTS 257
            L       W+S+ +   W  Y+ SKLA   +T  L +R    G  + +    PG++ T+
Sbjct: 152 -LN------WRSRRY-SPWLAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTN 203

Query: 258 MTQGQGSHTADEAADVGARLLLLHPQQ--LPT 287
           +    G    D       R++          T
Sbjct: 204 LQGASGRKLGDALMSAATRVVATDADFGARQT 235

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* Length = 260

 Score =  141 bits (358), Expect = 9e-41
 Identities = 57/231 (24%), Positives = 90/231 (38%), Gaps = 45/231 (19%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           +A+VT +  GIG A+ +RLA+ G  V++++R  E   R V +L  +GL V      V   
Sbjct: 16  VALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKA 75

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVS--FNDIYKNTVEHAETVIRTNFYGAKLLTESLL 149
              E  V+   +    +DILV+NA V+  F +I   T E  + ++  N     L+T++++
Sbjct: 76  EDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVV 135

Query: 150 PLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTW 209
           P   +      +L +SS                             +             
Sbjct: 136 PEMEKRGG-GSVLIVSSVGA--------------------------YHPFPNLGP----- 163

Query: 210 KSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ 260
                      Y VSK AL   T  LA       I VN   PG  +T+ +Q
Sbjct: 164 -----------YNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQ 203

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 280

 Score =  141 bits (359), Expect = 1e-40
 Identities = 59/261 (22%), Positives = 93/261 (35%), Gaps = 53/261 (20%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLP---VNFFQLDV 88
             I+TG++ GIG       A+ G  V +T R  ER +   + + + G+    VN    DV
Sbjct: 8   TVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADV 67

Query: 89  SDPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHA-----ETVIRTNFYGAKL 143
           +     +  ++     F  +D+LVNNAG +  D +  T            ++ N      
Sbjct: 68  TTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIE 127

Query: 144 LTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQS 203
           +T+ + P      SK  I+N+SS +                                   
Sbjct: 128 MTKKVKPHLVA--SKGEIVNVSSIVAGP-------------------------------- 153

Query: 204 VKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ--G 261
                   Q  P+    YA++K AL+ YT   A      GI VNS  PG  +T  T   G
Sbjct: 154 --------QAQPDF-LYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMG 204

Query: 262 QGSHTADEAADVGARLLLLHP 282
                + +  +  A      P
Sbjct: 205 MPDQASQKFYNFMASHKECIP 225

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 278

 Score =  141 bits (359), Expect = 1e-40
 Identities = 63/261 (24%), Positives = 94/261 (36%), Gaps = 53/261 (20%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLP---VNFFQLDV 88
           +AI+TG++ GIG A     A  G  V +T R  ER +   + +   G+    VN    DV
Sbjct: 8   VAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADV 67

Query: 89  SDPSSIEAFVSWFKSNFAALDILVNNAGVSFND-----IYKNTVEHAETVIRTNFYGAKL 143
           +  +  +  +S     F  LDILVNNAG +  D         ++E  +  +  N      
Sbjct: 68  TTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIA 127

Query: 144 LTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQS 203
           LT+  +P      +K  I+NISS    L                                
Sbjct: 128 LTKKAVPHLSS--TKGEIVNISSIASGL-------------------------------- 153

Query: 204 VKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ--G 261
                      P+    Y+++K A++ YT   A      GI VNS  PG   T      G
Sbjct: 154 --------HATPDF-PYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMG 204

Query: 262 QGSHTADEAADVGARLLLLHP 282
               T+ +     A +    P
Sbjct: 205 MPEETSKKFYSTMATMKECVP 225

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 297

 Score =  141 bits (359), Expect = 2e-40
 Identities = 57/259 (22%), Positives = 93/259 (35%), Gaps = 51/259 (19%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLP---VNFFQLDV 88
             I+TG++ GIG +     A+ G  V +T R+ +R +   + + + G+P   +N    DV
Sbjct: 28  SVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADV 87

Query: 89  SDPSSIEAFVSWFKSNFAALDILVNNAGVSFND---IYKNTVEHAETVIRTNFYGAKLLT 145
           ++ S  +  ++   + F  +DILVNNAG +  D        VE  +   + NF     +T
Sbjct: 88  TEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMT 147

Query: 146 ESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVK 205
           +       +  +K  I+N+SS +                                     
Sbjct: 148 QKTKEHLIK--TKGEIVNVSSIVAGP---------------------------------- 171

Query: 206 DGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ--GQG 263
                 Q        YA +K AL+ YT   A      G+ VNS  PG   T      G  
Sbjct: 172 ------QAHSGY-PYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLP 224

Query: 264 SHTADEAADVGARLLLLHP 282
              +D+            P
Sbjct: 225 ETASDKLYSFIGSRKECIP 243

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A Length = 252

 Score =  138 bits (351), Expect = 7e-40
 Identities = 56/234 (23%), Positives = 89/234 (38%), Gaps = 49/234 (20%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLP---VNFFQLDV 88
           I +VTGA+ GIG       A  G TVIL  R+ E+ ++    ++E+           L  
Sbjct: 14  IILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLT 73

Query: 89  SDPSSIEAFVSWFKSNFAALDILVNNAGV--SFNDIYKNTVEHAETVIRTNFYGAKLLTE 146
               + +        N+  LD +++NAG+      + +   +  + V++ N     +LT+
Sbjct: 74  CTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQ 133

Query: 147 SLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKD 206
           +LLPL  +S +   ++  SS                              VG        
Sbjct: 134 ALLPLLLKSDA-GSLVFTSS-----------------------------SVGR------- 156

Query: 207 GTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ 260
                QG    W  YA SK A      VLA  Y  + + VN   PG T+T+M  
Sbjct: 157 -----QGRAN-WGAYAASKFATEGMMQVLADEY-QQRLRVNCINPGGTRTAMRA 203

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} Length = 277

 Score =  139 bits (352), Expect = 1e-39
 Identities = 65/252 (25%), Positives = 91/252 (36%), Gaps = 47/252 (18%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           +AIVTGA  GIG A+ +RLA+ G  V+    D +    A   +   G      ++DVSD 
Sbjct: 31  VAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI---GCGAAACRVDVSDE 87

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVS-FNDIYKNTVEHAETVIRTNFYGAKLLTESLLP 150
             I A V    + F  +D LV NAGV     +   TVE  + VI  N  GA L T+   P
Sbjct: 88  QQIIAMVDACVAAFGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAP 147

Query: 151 LFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWK 210
                   + I+N+SS  G                           V +           
Sbjct: 148 RMIERGGGA-IVNLSSLAG--------------------------QVAVGGTGA------ 174

Query: 211 SQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTADEA 270
                     Y +SK  +   + + A      GI  N+  P F  T M Q   +      
Sbjct: 175 ----------YGMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQTAMAMFDGAL 224

Query: 271 ADVGARLLLLHP 282
              GAR ++   
Sbjct: 225 GAGGARSMIARL 236

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A Length = 259

 Score =  138 bits (350), Expect = 1e-39
 Identities = 50/231 (21%), Positives = 83/231 (35%), Gaps = 46/231 (19%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
            A++TG+ +GIG A  +     G TV +   D+ER ++A   +          Q+DV+  
Sbjct: 10  SALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAY---AVQMDVTRQ 66

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVS-FNDIYKNTVEHAETVIRTNFYGAKLLTESLLP 150
            SI+A ++    +   LDILVNNA +     I + T E  E +   N  G     ++   
Sbjct: 67  DSIDAAIAATVEHAGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAAR 126

Query: 151 LFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWK 210
                    +I+N++S+ G                            G  L ++      
Sbjct: 127 QMIAQGRGGKIINMASQAG--------------------------RRGEALVAI------ 154

Query: 211 SQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG 261
                     Y  +K A+ + T           I+VN+  PG        G
Sbjct: 155 ----------YCATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDG 195

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} Length = 256

 Score =  138 bits (349), Expect = 2e-39
 Identities = 52/230 (22%), Positives = 81/230 (35%), Gaps = 43/230 (18%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           +AIVTGA  GIG A+    A+ G +V++T    E  +    ++ + G      + +V+D 
Sbjct: 14  VAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDE 73

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPL 151
              EA +      F  + +LVNNAG      +   +   E   + N +    L++   P 
Sbjct: 74  QHREAVIKAALDQFGKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPH 133

Query: 152 FRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKS 211
            +++     ILNISS  G                                          
Sbjct: 134 MQKAGG-GAILNISSMAG--------------------------ENTNVRM--------- 157

Query: 212 QGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG 261
                    Y  SK A+N  T  +A      GI VN+  PG  +T     
Sbjct: 158 -------ASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALAT 200

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} Length = 254

 Score =  138 bits (349), Expect = 2e-39
 Identities = 49/258 (18%), Positives = 87/258 (33%), Gaps = 55/258 (21%)

Query: 32  IAIVTGANKGIGFALVKRLAELG--LTVILTARDVERGQRAVESLSEKGLPVNFFQLDVS 89
           + +VTG ++GIG ++V  L  L     V   AR     ++  E   ++   V     D++
Sbjct: 4   VILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYV---VGDIT 60

Query: 90  DPSSIEAFVSWFKSNFAALDILVNNAGVS--FNDIYKNTVEHAETVIRTNFYGAKLLTES 147
           + S ++  V+        +D LV NAGV     ++ +  V   + +   NF+    L   
Sbjct: 61  EDSVLKQLVNAAVKGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGI 120

Query: 148 LLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDG 207
            LP  ++  +   ++ +SS    +      +                             
Sbjct: 121 ALPELKK--TNGNVVFVSSDACNMY---FSS----------------------------- 146

Query: 208 TWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG--QGSH 265
                     W  Y  SK ALN + M LA   E   +   +  PG   T M     +   
Sbjct: 147 ----------WGAYGSSKAALNHFAMTLAN--EERQVKAIAVAPGIVDTDMQVNIRENVG 194

Query: 266 TADEAADVGARLLLLHPQ 283
            +  +A+       L   
Sbjct: 195 PSSMSAEQLKMFRGLKEN 212

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} Length = 250

 Score =  138 bits (349), Expect = 2e-39
 Identities = 47/255 (18%), Positives = 89/255 (34%), Gaps = 54/255 (21%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKG---LPVNFFQLDV 88
           +AI+TGA++GIG  +   LA  G  V+L AR  +  ++  + +              LD+
Sbjct: 9   LAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDI 68

Query: 89  SDPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESL 148
           +D +  +  +      + A+DILVN A +  +      V++   ++  N      + +++
Sbjct: 69  TDCTKADTEIKDIHQKYGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTV 128

Query: 149 LPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGT 208
             + +   +   I N++SR     K    +                         +    
Sbjct: 129 TEIMKVQKN-GYIFNVASRAA---KYGFAD-----------------------GGI---- 157

Query: 209 WKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTAD 268
                       Y  +K AL      L +     GI V + CPG+  T M          
Sbjct: 158 ------------YGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDMA--------K 197

Query: 269 EAADVGARLLLLHPQ 283
           +A        ++ P 
Sbjct: 198 KAGTPFKDEEMIQPD 212

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} Length = 262

 Score =  138 bits (349), Expect = 2e-39
 Identities = 57/233 (24%), Positives = 87/233 (37%), Gaps = 47/233 (20%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           +A+VTGA++GIG A+ ++L  LG  V+LTARDVE+ +     +   G        D+S  
Sbjct: 31  VAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHS 90

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSFND--IYKNTVEHAETVIRTNFYGAKLLTESLL 149
            +I AF +   +     D+LVNNAGV +    ++       + +I  N     LL  +  
Sbjct: 91  DAIAAFATGVLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFA 150

Query: 150 PLFRRSPSKS-RILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGT 208
           P      +K   I+NISS  G        +                        +     
Sbjct: 151 PAMIA--AKRGHIINISSLAGKNP---VAD-----------------------GAA---- 178

Query: 209 WKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG 261
                       Y  SK  LN      A+      + V+   PG  +T    G
Sbjct: 179 ------------YTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVG 219

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} Length = 283

 Score =  138 bits (350), Expect = 2e-39
 Identities = 56/253 (22%), Positives = 82/253 (32%), Gaps = 43/253 (16%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           +A++TGA  GIG A    LA  G+TV    R     +   + +   G      + DVSD 
Sbjct: 30  VALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDE 89

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVS--FNDIYKNTVEHAETVIRTNFYGAKLLTESLL 149
             +   V      F  LDI+V NAG++  +  I        +  I  N  G  L     +
Sbjct: 90  LQMRNAVRDLVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTV 149

Query: 150 PLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTW 209
           P  ++      I+ +SS  G       P                                
Sbjct: 150 PYLKQRGG-GAIVVVSSING-TRTFTTPG------------------------------- 176

Query: 210 KSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTADE 269
                    T Y  +K A  A    LA       I VN+ CPG  +T+++        +E
Sbjct: 177 --------ATAYTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRHEEE 228

Query: 270 AADVGARLLLLHP 282
            A          P
Sbjct: 229 TAIPVEWPKGQVP 241

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Length = 279

 Score =  138 bits (350), Expect = 2e-39
 Identities = 63/271 (23%), Positives = 96/271 (35%), Gaps = 50/271 (18%)

Query: 1   MKSQEPDPNYFSSSSSSSSLVSSTKWWSKETIAIVTGANKGIGFALVKRLAELGLTVILT 60
           M S     ++ S      S +S  +       A VTG + GIG A+ + LA  G+ V   
Sbjct: 1   MGSSHHHHHHSSGLVPRGSHMSRPQ------TAFVTGVSSGIGLAVARTLAARGIAVYGC 54

Query: 61  ARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDILVNNAGVS-F 119
           ARD +    AV+ L   G  V+    DV+    + A V+     F  + ILVN+AG +  
Sbjct: 55  ARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFGPIGILVNSAGRNGG 114

Query: 120 NDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKS-RILNISSRLGTLSKVRNPN 178
            +           V+ TN  G   +T  +L       +   RI+NI+S  G         
Sbjct: 115 GETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGG--------- 165

Query: 179 IKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKR 238
                              G+                     Y  SK  +  +T  +   
Sbjct: 166 -----------------KQGVMYA----------------APYTASKHGVVGFTKSVGFE 192

Query: 239 YEGEGISVNSYCPGFTQTSMTQGQGSHTADE 269
               GI+VN+ CPG+ +T M +      A  
Sbjct: 193 LAKTGITVNAVCPGYVETPMAERVREGYARH 223

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* Length = 255

 Score =  137 bits (347), Expect = 3e-39
 Identities = 45/230 (19%), Positives = 75/230 (32%), Gaps = 45/230 (19%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
            AI+TGA  GIG  +    A  G +V+++  + +     V+ + + G      + D++  
Sbjct: 13  CAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSE 72

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPL 151
             + A   +  S    +DILVNNAG      +   +         N +    L++ + P 
Sbjct: 73  QELSALADFAISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPE 132

Query: 152 FRRSPSKS-RILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWK 210
             +  +    IL I+S         N N                                
Sbjct: 133 MEK--NGGGVILTITSMAAENK---NIN-------------------------------- 155

Query: 211 SQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ 260
                     YA SK A +     +A     + I VN   PG   T   +
Sbjct: 156 -MTS------YASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALK 198

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} Length = 280

 Score =  138 bits (349), Expect = 3e-39
 Identities = 63/253 (24%), Positives = 82/253 (32%), Gaps = 47/253 (18%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           IAIVTGA+ GIG A     A  G  V++TAR+        + ++  G        DV D 
Sbjct: 10  IAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDE 69

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVS--FNDIYKNTVEHAETVIRTNFYGAKLLTESLL 149
           +  EA V      F  LD   NNAG      +I   +VE     + TN   A L  +  +
Sbjct: 70  ALHEALVELAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQV 129

Query: 150 PLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTW 209
           P        S +   SS +G  +                                     
Sbjct: 130 PAIAALGGGS-LTFTSSFVGHTA------------------------------------- 151

Query: 210 KSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTADE 269
              G+      YA SK  L      LA      GI VN+  PG T T          A E
Sbjct: 152 ---GFAG-VAPYAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGAAPE 207

Query: 270 AADVGARLLLLHP 282
                  +  LH 
Sbjct: 208 TR---GFVEGLHA 217

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} Length = 281

 Score =  137 bits (347), Expect = 6e-39
 Identities = 54/246 (21%), Positives = 85/246 (34%), Gaps = 46/246 (18%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEK-GLPVNFFQLDVSD 90
           IA+VTG   G+G  + + L+  G +V++T R  +    A   +  + G  V     DV D
Sbjct: 35  IALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGD 94

Query: 91  PSSIEAFVSWFKSNFAALDILVNNAGVSF--NDIYKNTVEHAETVIRTNFYGAKLLTESL 148
           P  + A  +  ++ FA LD+LVNNAG +     + + T E    ++  N  GA L T+  
Sbjct: 95  PDQVAALFAAVRAEFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHA 154

Query: 149 LPLFRRSPSKS-RILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDG 207
             + +    +  RI+N  S          PN                             
Sbjct: 155 FRMMKAQTPRGGRIINNGSISAQ---TPRPNS---------------------------- 183

Query: 208 TWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTA 267
                        Y  +K A+   T   A       I+      G   T MT    +   
Sbjct: 184 -----------APYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTARMSTGVL 232

Query: 268 DEAADV 273
               +V
Sbjct: 233 QANGEV 238

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} Length = 254

 Score =  136 bits (345), Expect = 6e-39
 Identities = 57/253 (22%), Positives = 94/253 (37%), Gaps = 48/253 (18%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           + IVTGA  GIG A+ K+ A     V+      +R  + V+ L   G  V   + DVS  
Sbjct: 9   VVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKK 68

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVS--FNDIYKNTVEHAETVIRTNFYGAKLLTESLL 149
             +E FV      ++ +D+L NNAG+      + + + E  E V+  N Y A   + +++
Sbjct: 69  KDVEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVI 128

Query: 150 PLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTW 209
           P+  +   K  I+N +S  G                            G F  +      
Sbjct: 129 PIMLKQ-GKGVIVNTASIAG--------------------------IRGGFAGAP----- 156

Query: 210 KSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTADE 269
                      Y V+K  L   T  +A  Y  +GI   +  PG  +T++  G    +   
Sbjct: 157 -----------YTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSELG 205

Query: 270 AADVGARLLLLHP 282
              +     L+  
Sbjct: 206 MRTL---TKLMSL 215

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} Length = 253

 Score =  136 bits (345), Expect = 6e-39
 Identities = 48/234 (20%), Positives = 82/234 (35%), Gaps = 50/234 (21%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           + IVTG+  GIG A  + LA  G  V++   + E  +   + +   G       +DVSDP
Sbjct: 11  VGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDP 70

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVS----FNDIYKNTVEHAETVIRTNFYGAKLLTES 147
            S +A      + F  +D LVNNA +      + +     E+ +  +  N  GA   T +
Sbjct: 71  ESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRA 130

Query: 148 LLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDG 207
           +     +      I+N SS       + +                               
Sbjct: 131 VYKKMTKRGG-GAIVNQSSTAA---WLYSNY----------------------------- 157

Query: 208 TWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG 261
                        Y ++K+ +N  T  L++   G  I +N+  PG   T   + 
Sbjct: 158 -------------YGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRT 198

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} Length = 260

 Score =  136 bits (344), Expect = 9e-39
 Identities = 54/254 (21%), Positives = 89/254 (35%), Gaps = 48/254 (18%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           +AIVTG  + IG A V  LAE G  VI+   D     +AVE L  +G  V+   +DV++ 
Sbjct: 15  VAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNT 74

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSFND--IYKNTVEHAETVIRTNFYGAKLLTESLL 149
            S++  V         +DILV  AG+  ++      T       +  N  G     +++ 
Sbjct: 75  ESVQNAVRSVHEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVG 134

Query: 150 PLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTW 209
            +         I+ I S  G +                                      
Sbjct: 135 RIMLEQKQ-GVIVAIGSMSGLIV------------------------------------- 156

Query: 210 KSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTADE 269
                P+    Y  SK  ++ Y   LA  +   GI  N+  P + +T++T+        E
Sbjct: 157 ---NRPQQQAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRF-----GME 208

Query: 270 AADVGARLLLLHPQ 283
             ++    +   P 
Sbjct: 209 KPELYDAWIAGTPM 222

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} Length = 271

 Score =  136 bits (345), Expect = 1e-38
 Identities = 67/242 (27%), Positives = 88/242 (36%), Gaps = 46/242 (19%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILT-ARDVERGQRAVESLSEKGLPVNFFQLDVSD 90
            A VTG ++GIG A+ KRLA  G  V LT     ER Q  V  + + G      + D  D
Sbjct: 33  TAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRD 92

Query: 91  PSSIEAFVSWFKSNFAALDILVNNAGV-SFNDIYKNTVEHAETVIRTNFYGAKLLTESLL 149
             +IE  +         LDILVN+AG+     + + TV   + V+  NF    +   S  
Sbjct: 93  AEAIEQAIRETVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSAS 152

Query: 150 PLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTW 209
                     RI+ I S L  L                                      
Sbjct: 153 RHLGDG---GRIITIGSNLAELV------------------------------------- 172

Query: 210 KSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTADE 269
               WP I + Y+ SK AL   T  LA+     GI+VN   PG T T M    G H   +
Sbjct: 173 ---PWPGI-SLYSASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPADGDHAEAQ 228

Query: 270 AA 271
             
Sbjct: 229 RE 230

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* Length = 254

 Score =  135 bits (342), Expect = 2e-38
 Identities = 59/259 (22%), Positives = 86/259 (33%), Gaps = 55/259 (21%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEK-GLPVNFFQLDVSD 90
             I   A  GIG    + L +  L   +    VE      E  +    + + F   DV+ 
Sbjct: 7   NVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTV 66

Query: 91  P-SSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLL 149
           P +  +  +         +DIL+N AG+  +D         E  I  NF G    T ++L
Sbjct: 67  PVAESKKLLKKIFDQLKTVDILINGAGI-LDD------HQIERTIAINFTGLVNTTTAIL 119

Query: 150 PLF--RRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDG 207
             +  R+      I NI S  G                          F  +    V   
Sbjct: 120 DFWDKRKGGPGGIIANICSVTG--------------------------FNAIHQVPV--- 150

Query: 208 TWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTA 267
                        Y+ SK A+ ++T  LAK     G++  S  PG T+T +     S   
Sbjct: 151 -------------YSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLD 197

Query: 268 DEAADVGARLLLLHPQQLP 286
            E     A LLL HP Q  
Sbjct: 198 VEPR--VAELLLSHPTQTS 214

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} Length = 258

 Score =  135 bits (343), Expect = 2e-38
 Identities = 46/233 (19%), Positives = 87/233 (37%), Gaps = 45/233 (19%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILT--ARDVERGQRAVESLSEKGLPVNFFQLDVS 89
           +A+VTG  +GIG  + ++LA  G  + +    +  E+    ++ +        F  LDV+
Sbjct: 4   VAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVT 63

Query: 90  DPSSIEAFVSWFKSNFAALDILVNNAGVS-FNDIYKNTVEHAETVIRTNFYGAKLLTESL 148
           D ++ ++ +          D+LVNNAG++    + + T E  + +   N +      ++ 
Sbjct: 64  DKANFDSAIDEAAEKLGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAA 123

Query: 149 LPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGT 208
              F     K +I+N +S                               G  + S     
Sbjct: 124 SRKFDELGVKGKIINAASIAA--------------------------IQGFPILSA---- 153

Query: 209 WKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG 261
                       Y+ +K A+   T   A+    +G +VN+Y PG   T M + 
Sbjct: 154 ------------YSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQ 194

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A Length = 251

 Score =  134 bits (341), Expect = 2e-38
 Identities = 53/258 (20%), Positives = 89/258 (34%), Gaps = 60/258 (23%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           +AI+TG   GIG A+  +  E G  V++T R  + G++A +S+      + FFQ D SD 
Sbjct: 8   VAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPD-QIQFFQHDSSDE 66

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVS-FNDIYKNTVEHAETVIRTN----FYGAKLLTE 146
                     +  F  +  LVNNAG++    + + T      ++  N    F+G +    
Sbjct: 67  DGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTR---- 122

Query: 147 SLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKD 206
             +   +     + I+N+SS  G                          FVG        
Sbjct: 123 LGIQRMKNKGLGASIINMSSIEG--------------------------FVGDPSLGA-- 154

Query: 207 GTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRY--EGEGISVNSYCPGFTQTSMTQGQGS 264
                         Y  SK A+   +   A     +   + VN+  PG+ +T +      
Sbjct: 155 --------------YNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLP- 199

Query: 265 HTADEAADVGARLLLLHP 282
                 A+         P
Sbjct: 200 -----GAEEAMSQRTKTP 212

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 Length = 262

 Score =  135 bits (341), Expect = 3e-38
 Identities = 52/243 (21%), Positives = 81/243 (33%), Gaps = 45/243 (18%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           + +VTGA   IG A   RLAE G  + L   + E  ++A  S+ EKG+    +  DV+  
Sbjct: 9   VCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSE 68

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVS--FNDIYKNTVEHAETVIRTNFYGAKLLTESLL 149
            ++   V     +F  +D L NNAG    F  +     +    V+  N  GA  + +++ 
Sbjct: 69  EAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVS 128

Query: 150 PLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTW 209
                     RI+N +S  G                            G    +      
Sbjct: 129 RQMITQNY-GRIVNTASMAG--------------------------VKGPPNMAA----- 156

Query: 210 KSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTADE 269
                      Y  SK A+ A T   A       I VN+  PG+        +      +
Sbjct: 157 -----------YGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAK 205

Query: 270 AAD 272
              
Sbjct: 206 VGS 208

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* Length = 261

 Score =  134 bits (341), Expect = 3e-38
 Identities = 49/232 (21%), Positives = 86/232 (37%), Gaps = 44/232 (18%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILT-ARDVERGQRAVESLSEKGLPVNFFQLDVSD 90
           + ++TG++ G+G ++  R A     V++      +     +E + + G      + DV+ 
Sbjct: 9   VVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTV 68

Query: 91  PSSIEAFVSWFKSNFAALDILVNNAGVS-FNDIYKNTVEHAETVIRTNFYGAKLLTESLL 149
            S +   V      F  LD+++NNAG+      ++ ++     VI TN  GA L +   +
Sbjct: 69  ESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAI 128

Query: 150 PLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTW 209
             F  +  K  ++N+SS    +                                      
Sbjct: 129 KYFVENDIKGTVINMSSVHEKI-------------------------------------- 150

Query: 210 KSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG 261
               WP  +  YA SK  +   T  LA  Y  +GI VN+  PG   T +   
Sbjct: 151 ---PWPL-FVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAE 198

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} Length = 261

 Score =  134 bits (341), Expect = 3e-38
 Identities = 53/256 (20%), Positives = 94/256 (36%), Gaps = 53/256 (20%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           +A++TGA  G G  + KR A+ G  V++  RD    +R    + +  L       D+S  
Sbjct: 11  VALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAAL---AVAADISKE 67

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSFND--IYKNTVEHAETVIRTNFYGAKLLTESLL 149
           + ++A V    S F  +DILVNNAG+            E  + ++  N  G  L+T  L+
Sbjct: 68  ADVDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLI 127

Query: 150 PLFRRSPSKSR---ILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKD 206
           P F+ + +K +   ILN++S                                        
Sbjct: 128 PHFKENGAKGQECVILNVAS-----------------------------TGAG------- 151

Query: 207 GTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHT 266
                +  P     Y  +K  + + T  LA       I V +  P   +T +     +  
Sbjct: 152 -----RPRPN-LAWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLT---TFM 202

Query: 267 ADEAADVGARLLLLHP 282
            +++ ++  +     P
Sbjct: 203 GEDSEEIRKKFRDSIP 218

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} Length = 281

 Score =  135 bits (342), Expect = 4e-38
 Identities = 44/256 (17%), Positives = 78/256 (30%), Gaps = 53/256 (20%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSE---KGLPVNFFQLDV 88
             +VTG   GIG  +   L   G +V++  R+ ++   AV+ L      G  + +   D+
Sbjct: 13  TYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDI 72

Query: 89  SDPSSIEAFVSWFKSNFAALDILVNNAGVS--FNDIYKNTVEHAETVIRTNFYGAKLLTE 146
           ++       V    +    L  +V+ AG S     I +   E     +  N  G   + +
Sbjct: 73  TNEDETARAVDAVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLK 132

Query: 147 SLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKD 206
                  R       + ISS                                        
Sbjct: 133 HAAREMVRGGG-GSFVGISSIAA------------------------------------- 154

Query: 207 GTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHT 266
               S         Y V+K A++    + A       + VNS  PG  +T +        
Sbjct: 155 ----SNTHRWF-GAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAA----- 204

Query: 267 ADEAADVGARLLLLHP 282
             E+A++ +   +  P
Sbjct: 205 ITESAELSSDYAMCTP 220

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} Length = 280

 Score =  135 bits (341), Expect = 4e-38
 Identities = 62/234 (26%), Positives = 99/234 (42%), Gaps = 48/234 (20%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILT-ARDVERGQRAVESLSEKGLPVNFFQLDVSD 90
           +AIVTG  +GIG  + + LA  G  + +T   D E     +  LS  G  V F + D++D
Sbjct: 31  VAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLAD 90

Query: 91  PSSIEAFVSWFKSNFAALDILVNNAGVSFN---DIYKNTVEHAETVIRTNFYGAKLLTES 147
            SS +A V    + F  +D LVNNAG++     D      E+ +T++  N  G    T++
Sbjct: 91  LSSHQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQA 150

Query: 148 LLPLFRRSPSKS--RILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVK 205
           +L     S +++   I+NI+S    ++   +P              +             
Sbjct: 151 VLKAMLASDARASRSIINITSVSAVMT---SPE-------------R------------- 181

Query: 206 DGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMT 259
                         DY +SK  L A++  LA R    GI+V    PG  ++ MT
Sbjct: 182 -------------LDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMT 222

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} Length = 266

 Score =  134 bits (340), Expect = 5e-38
 Identities = 49/252 (19%), Positives = 82/252 (32%), Gaps = 55/252 (21%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           +A+VTGA  GIG A+V  L   G  V +  R V      +               D+ + 
Sbjct: 30  VALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAADL-----------HLPGDLREA 78

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVS-FNDIYKNTVEHAETVIRTNFYGAKLLTESLLP 150
           +  +       +    LDI+VNNAGV     I + T       +  N      +  + +P
Sbjct: 79  AYADGLPGAVAAGLGRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIP 138

Query: 151 LFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWK 210
           L   +     I+N++S  G                                 ++      
Sbjct: 139 LMAAAGG-GAIVNVASCWG--------------------------LRPGPGHAL------ 165

Query: 211 SQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTADEA 270
                     Y ++K AL + T  +   +  +GI +N+ CP    T M +   +    + 
Sbjct: 166 ----------YCLTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFAKRGFDP 215

Query: 271 ADVGARLLLLHP 282
               A L    P
Sbjct: 216 DRAVAELGRTVP 227

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* Length = 277

 Score =  134 bits (340), Expect = 5e-38
 Identities = 61/232 (26%), Positives = 91/232 (39%), Gaps = 44/232 (18%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           +A+VTGA  GIG  + +RL + GL V + AR  E  +  ++ L E G+  +    DV   
Sbjct: 24  VALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSV 83

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVS-FNDIYKNTVEHAETVIRTNFYGAKLLTESLLP 150
             IEA V+     +  +D+LVNNAG        +   E    V+ TN  G   +T+ +L 
Sbjct: 84  PEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLK 143

Query: 151 LFRRSPSKS-RILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTW 209
                   + RI+NI+S  G                            G+          
Sbjct: 144 AGGMLERGTGRIVNIASTGG--------------------------KQGVVHA------- 170

Query: 210 KSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG 261
                      Y+ SK  +  +T  L       GI+VN+ CPGF +T M   
Sbjct: 171 ---------APYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAAS 213

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} Length = 319

 Score =  135 bits (342), Expect = 6e-38
 Identities = 45/253 (17%), Positives = 83/253 (32%), Gaps = 50/253 (19%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEK--GLPVNFFQLDVS 89
            A VTG   G+G  LV++L   G  V +     +   +A+ +L  +  G  V   QLDV+
Sbjct: 10  TAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVA 69

Query: 90  DPSSIEAFVSWFKSNFAALDILVNNAGVS-FNDIYKNTVEHAETVIRTNFYGAKLLTESL 148
                +      ++ F  + IL NNAGV+ F  I +++ +  + ++  N +G      + 
Sbjct: 70  SREGFKMAADEVEARFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTF 129

Query: 149 LPLFRRSPSKS-----RILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQS 203
           +P               ++N +S                             F+      
Sbjct: 130 VPRMVERVKAGEQKGGHVVNTASMAA--------------------------FLAAGSPG 163

Query: 204 VKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQG 263
           +                Y  +K A+   +  L        I V+  CPG  ++ +     
Sbjct: 164 I----------------YNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDD 207

Query: 264 SHTADEAADVGAR 276
                   +V   
Sbjct: 208 IRPDALKGEVKPV 220

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* Length = 254

 Score =  133 bits (338), Expect = 6e-38
 Identities = 59/252 (23%), Positives = 91/252 (36%), Gaps = 54/252 (21%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
             I+TG  +G+G    ++    G  V+L     E G      L   G    +  LDV+  
Sbjct: 7   TVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL---GDAARYQHLDVTIE 63

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVS-FNDIYKNTVEHAETVIRTNFYGAKLLTESLLP 150
              +  V++ +  F ++D LVNNAG+S    +   +VE    V+  N  G  +  ++++P
Sbjct: 64  EDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIP 123

Query: 151 LFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWK 210
             + +   S I+NISS  G                           +GL L S       
Sbjct: 124 AMKDAGGGS-IVNISSAAG--------------------------LMGLALTSS------ 150

Query: 211 SQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTADEA 270
                     Y  SK  +   + + A     + I VNS  PG T T M       TA+  
Sbjct: 151 ----------YGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPM-------TAETG 193

Query: 271 ADVGARLLLLHP 282
              G       P
Sbjct: 194 IRQGEGNYPNTP 205

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} Length = 266

 Score =  134 bits (339), Expect = 7e-38
 Identities = 47/233 (20%), Positives = 79/233 (33%), Gaps = 45/233 (19%)

Query: 32  IAIVTGA-NKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLP-VNFFQLDVS 89
           + +VT A   GIG    +R    G  V+++     R     + L++ GL  V     DV+
Sbjct: 24  VVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVT 83

Query: 90  DPSSIEAFVSWFKSNFAALDILVNNAGVS-FNDIYKNTVEHAETVIRTNFYGAKLLTESL 148
              +++A ++        LD+LVNNAG+     +   T E  + V+          T + 
Sbjct: 84  STEAVDALITQTVEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAA 143

Query: 149 LPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGT 208
           L  FR       I+N +S LG                          +     Q      
Sbjct: 144 LRYFRGVDHGGVIVNNASVLG--------------------------WRAQHSQ------ 171

Query: 209 WKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG 261
                     + YA +K  + A T   A      G+ +N+  P   +    + 
Sbjct: 172 ----------SHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEK 214

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} Length = 277

 Score =  133 bits (338), Expect = 1e-37
 Identities = 51/252 (20%), Positives = 92/252 (36%), Gaps = 48/252 (19%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           + IVTG   GIG A  +  A+ G  V++   + +   R    +  K       ++DVS  
Sbjct: 29  VCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAF---GVRVDVSSA 85

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVS-FNDIYKNTVEHAETVIRTNFYGAKLLTESLLP 150
              E+ V    + +  +D+LVNNAG     ++     E  + ++  N  G  L ++ ++P
Sbjct: 86  KDAESMVEKTTAKWGRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIP 145

Query: 151 LFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWK 210
           + RR+   S I+N +S                                +  ++       
Sbjct: 146 VMRRNGGGS-IINTTSYTA--------------------------TSAIADRTA------ 172

Query: 211 SQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTADEA 270
                     Y  SK A+++ T  +A  +  EGI VN+  PG   +       +   D A
Sbjct: 173 ----------YVASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKDPA 222

Query: 271 ADVGARLLLLHP 282
             + +       
Sbjct: 223 K-LRSDFNARAV 233

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} Length = 276

 Score =  133 bits (338), Expect = 1e-37
 Identities = 46/230 (20%), Positives = 78/230 (33%), Gaps = 41/230 (17%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
            A++TGA+ GIG  +    AE G  V + AR  +  Q   + ++  G      + DV+ P
Sbjct: 34  RALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQP 93

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSF-NDIYKNTVEHAETVIRTNFYGAKLLTESLLP 150
             +   +         +DI V NAG+     +    +E  + +  TN  G  L  ++   
Sbjct: 94  DQVRGMLDQMTGELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAAR 153

Query: 151 LFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWK 210
                     I+  +S  G                           +             
Sbjct: 154 AMVDQGLGGTIITTASMSG--------------------------HII------------ 175

Query: 211 SQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ 260
               P+  + Y  SK A+   T  +A       I VNS  PG+ +T + +
Sbjct: 176 --NIPQQVSHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVE 223

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} Length = 255

 Score =  133 bits (336), Expect = 1e-37
 Identities = 59/238 (24%), Positives = 92/238 (38%), Gaps = 53/238 (22%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILT-ARDVERGQRAVESLSEKGLPVNFFQLDVSD 90
           +A+VTGA++GIG A+ KRLA  G  V +      E  +  V  +   G        ++  
Sbjct: 9   VALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLES 68

Query: 91  PSSIEAFVSWFKSNFAA------LDILVNNAGVS-FNDIYKNTVEHAETVIRTNFYGAKL 143
              +EA  S   +           DIL+NNAG+     I + T +  + ++  N      
Sbjct: 69  LHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFF 128

Query: 144 LTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQS 203
           + +  L   R +   SRI+NISS    +S    P+                         
Sbjct: 129 IIQQALSRLRDN---SRIINISSAATRIS---LPD-----------------------FI 159

Query: 204 VKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG 261
                            Y+++K A+N  T  LAK+    GI+VN+  PGF +T M   
Sbjct: 160 A----------------YSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAE 201

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} Length = 272

 Score =  133 bits (337), Expect = 2e-37
 Identities = 62/238 (26%), Positives = 94/238 (39%), Gaps = 46/238 (19%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILT-ARDVERGQRAVESLSEKGLPVNFFQLDVSD 90
           + +VTG ++GIG A+ +  A  G  V +  A + E     V +++E G        DV +
Sbjct: 28  VVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGN 87

Query: 91  PSSIEAFVSWFKSNFAALDILVNNAGVSFND--IYKNTVEHAETVIRTNFYGAKLLTESL 148
            + I A  S     F  LD LVNNAG+      + + +VE  E ++R N  G+ L     
Sbjct: 88  AADIAAMFSAVDRQFGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEA 147

Query: 149 LPLFRRSPSKS--RILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKD 206
           +    R  S     I+N+SS    L                                   
Sbjct: 148 VRRMSRLYSGQGGAIVNVSSMAAIL----------------------------------- 172

Query: 207 GTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGS 264
                 G    + DYA SK A++ +T+ LA+    EGI VN+  PG  +T +    G 
Sbjct: 173 ------GSATQYVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASGGL 224

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} Length = 276

 Score =  133 bits (337), Expect = 2e-37
 Identities = 67/234 (28%), Positives = 89/234 (38%), Gaps = 46/234 (19%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           IA+VTG ++GIG  + + L E G  V + ARD E        LS  G        D+S  
Sbjct: 31  IALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYG-DCQAIPADLSSE 89

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSF-NDIYKNTVEHAETVIRTNFYGAKLLTESLLP 150
           +             A LDILVNNAG S+   +    V   E V++ N        + LLP
Sbjct: 90  AGARRLAQALGELSARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLP 149

Query: 151 LFRRSPSK---SRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDG 207
           L RRS S    +R++NI S  G                                      
Sbjct: 150 LLRRSASAENPARVINIGSVAGI------------------------------------- 172

Query: 208 TWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG 261
                   E    Y  SK AL+  + +LAK   GE I+VN   PG   + MT+ 
Sbjct: 173 ----SAMGEQAYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRH 222

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* Length = 258

 Score =  132 bits (335), Expect = 2e-37
 Identities = 49/231 (21%), Positives = 79/231 (34%), Gaps = 45/231 (19%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILT-ARDVERGQRAVESLSEKGLPVNFFQLDVSD 90
            A+VTG+++G+G A   RLAE G  +++  AR  +      E + + G+ V   + +V  
Sbjct: 6   CALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQ 65

Query: 91  PSSIEAFVSWFKSNFAALDILVNNAGVS-FNDIYKNTVEHAETVIRTNFYGAKLLTESLL 149
           P+ I+         F  LD+ VNNA       + +    H +  +  N        +   
Sbjct: 66  PAKIKEMFQQIDETFGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAA 125

Query: 150 PLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTW 209
            L  ++     I++ISS           N                        +      
Sbjct: 126 KLMEKNGG-GHIVSISSLGSIRY---LEN-----------------------YTT----- 153

Query: 210 KSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ 260
                        VSK AL A T  LA     + I VN+   G   T   +
Sbjct: 154 -----------VGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALK 193

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 Length = 274

 Score =  133 bits (336), Expect = 2e-37
 Identities = 59/263 (22%), Positives = 95/263 (36%), Gaps = 48/263 (18%)

Query: 12  SSSSSSSSLVSSTKWWSKETIAIVTGANKGIGFALVKRLAELGLTVILT-ARDVERGQRA 70
           +  +SS    +S     K  +A+ TGA +GIG  +   L   G +V++      +  +  
Sbjct: 5   ADITSSGPSDASKPLAGK--VALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEV 62

Query: 71  VESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDILVNNAGV-SFNDIYKNTVEH 129
           V  L + G      Q D+S PS + A      S+F  LD +++N+G+  + D  + T E 
Sbjct: 63  VAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQEL 122

Query: 130 AETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELS 189
            + V   N  G   + +  L   RR     RI+  SS    +     PN           
Sbjct: 123 FDKVFNLNTRGQFFVAQQGLKHCRRG---GRIILTSSIAAVM--TGIPN----------- 166

Query: 190 EEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSY 249
                        ++                YA SK A+  +    A     +G++VN  
Sbjct: 167 ------------HAL----------------YAGSKAAVEGFCRAFAVDCGAKGVTVNCI 198

Query: 250 CPGFTQTSMTQGQGSHTADEAAD 272
            PG  +T M      H A     
Sbjct: 199 APGGVKTDMFDENSWHYAPGGYK 221

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 Length = 267

 Score =  132 bits (335), Expect = 2e-37
 Identities = 59/261 (22%), Positives = 94/261 (36%), Gaps = 60/261 (22%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVN--FFQLDVS 89
           +A+VTGA +GIG A  + L   G  V L   ++E G +   +L E+  P    F Q DV+
Sbjct: 9   VALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVA 68

Query: 90  DPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTN----FYGAKLLT 145
           D   +         +F  LDILVNNAGV       N  ++ E  ++ N      G  L  
Sbjct: 69  DQQQLRDTFRKVVDHFGRLDILVNNAGV-------NNEKNWEKTLQINLVSVISGTYLGL 121

Query: 146 ESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVK 205
           + +    +       I+N+SS  G                           + +  Q V 
Sbjct: 122 DYMSK--QNGGEGGIIINMSSLAG--------------------------LMPVAQQPV- 152

Query: 206 DGTWKSQGWPEIWTDYAVSKLALNAYT--MVLAKRYEGEGISVNSYCPGFTQTSMTQGQG 263
                          Y  SK  +  +T    LA      G+ +N+ CPGF  T++ +   
Sbjct: 153 ---------------YCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIE 197

Query: 264 SHTAD-EAADVGARLLLLHPQ 283
                 +  +    +  +   
Sbjct: 198 KEENMGQYIEYKDHIKDMIKY 218

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} Length = 267

 Score =  132 bits (335), Expect = 2e-37
 Identities = 61/242 (25%), Positives = 92/242 (38%), Gaps = 47/242 (19%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILT-ARDVERGQRAVESLSEKGLPVNFFQLDVSD 90
           +AIVTGA++GIG A+  RLA  G TV++  A      +     +   G      Q DVSD
Sbjct: 29  VAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSD 88

Query: 91  PSSIEAFVSWFKSNFAALDILVNNAGV-SFNDIYKNTVEHAETVIRTNFYGAKLLTESLL 149
           P+++    +  +  F  +D+LVNNAG+     I +      + VI  N  G         
Sbjct: 89  PAAVRRLFATAEEAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAA 148

Query: 150 PLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTW 209
              R      RI+N+S+    L    +P+                         +     
Sbjct: 149 QRLRVG---GRIINMSTSQVGLL---HPS-----------------------YGI----- 174

Query: 210 KSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTADE 269
                      YA +K  + A T VL+K   G  I+VN+  PG T T +     S    +
Sbjct: 175 -----------YAAAKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLEGKSDEVRD 223

Query: 270 AA 271
             
Sbjct: 224 RF 225

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} Length = 272

 Score =  132 bits (335), Expect = 2e-37
 Identities = 53/245 (21%), Positives = 79/245 (32%), Gaps = 48/245 (19%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           IAIVTGA  G+G A+   LA  G  V L  R ++  Q     + +  L V     DV+DP
Sbjct: 30  IAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDALCV---PTDVTDP 86

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVS--FNDIYKNTVEHAETVIRTNFYGAKLLTESLL 149
            S+ A  +     F  +D+L NNAG       +   T    + V+ TN  G  L T+   
Sbjct: 87  DSVRALFTATVEKFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAF 146

Query: 150 PLFRRSPSKS-RILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGT 208
            + +    +  RI+N  S   T                                +     
Sbjct: 147 RVMKAQEPRGGRIINNGSISAT--------------------------SPRPYSAP---- 176

Query: 209 WKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTAD 268
                       Y  +K A+   T   +       I+      G   T M Q   +    
Sbjct: 177 ------------YTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQKMKAGVPQ 224

Query: 269 EAADV 273
               +
Sbjct: 225 ADLSI 229

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} Length = 262

 Score =  132 bits (335), Expect = 3e-37
 Identities = 53/235 (22%), Positives = 75/235 (31%), Gaps = 46/235 (19%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLP-VNFFQLDVSD 90
             +VTG  KGIG  +    A  G  V +  R        V  L + G   V   Q DVSD
Sbjct: 12  SVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSD 71

Query: 91  PSSIEAFVSWFKSNFAALDILVNNAGVSFND--IYKNTVEHAETVIRTNFYGAKLLTESL 148
            +  +A        F  +D++  NAGV F D  +   T E    +   N  G     ++ 
Sbjct: 72  RAQCDALAGRAVEEFGGIDVVCANAGV-FPDAPLATMTPEQLNGIFAVNVNGTFYAVQAC 130

Query: 149 LPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGT 208
           L     S S  R++  SS  G ++    P                               
Sbjct: 131 LDALIASGS-GRVVLTSSITGPITG--YPG------------------------------ 157

Query: 209 WKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQG 263
                    W+ Y  +K A   +    A       I+VN+  PG   T      G
Sbjct: 158 ---------WSHYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLENG 203

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* Length = 249

 Score =  132 bits (334), Expect = 3e-37
 Identities = 55/230 (23%), Positives = 90/230 (39%), Gaps = 46/230 (20%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           +A++TG   GIG A+ +R A  G  + +   D+     A  ++   G  V   + DVS P
Sbjct: 9   LAVITGGANGIGRAIAERFAVEGADIAIA--DLVPAPEAEAAIRNLGRRVLTVKCDVSQP 66

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVS-FNDIYKNTVEHAETVIRTNFYGAKLLTESLLP 150
             +EAF     S F   DILVNNAG+       + T E  +     N     L+ ++ +P
Sbjct: 67  GDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVP 126

Query: 151 LFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWK 210
             +R+    RI+N++S                             ++ +           
Sbjct: 127 GMKRN-GWGRIINLTSTTY--------------------------WLKIEAY-------- 151

Query: 211 SQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ 260
                   T Y  +K A   +T  LA     +GI+VN+  P   +T+ T+
Sbjct: 152 --------THYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTE 193

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* Length = 258

 Score =  132 bits (334), Expect = 3e-37
 Identities = 42/237 (17%), Positives = 74/237 (31%), Gaps = 48/237 (20%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERG-QRAVESLSEKGLPVNFFQLDVSD 90
             ++TG+++GIG A  +  A  G  V L  R         + S+   G    FF  D++ 
Sbjct: 9   RVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLAT 68

Query: 91  PSSIEAFVSWFKSNFAALDILVNNAGVSFND--IYKNTVEHAETVIRTNFYGAKLLTESL 148
             + +  V  F + F  +D+L+NNAG       + +      + V+  N     + T+  
Sbjct: 69  SEACQQLVDEFVAKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFA 128

Query: 149 LPLFRRSPSKS----RILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSV 204
           LP    +   S     +++  S                               G      
Sbjct: 129 LPHLAAAAKASGQTSAVISTGS-----------------------------IAGH----- 154

Query: 205 KDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG 261
             G             Y  +K  L+         +  +G+  N   PG   T+    
Sbjct: 155 -TGGGPGA------GLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHAD 204

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} Length = 255

 Score =  131 bits (331), Expect = 7e-37
 Identities = 55/230 (23%), Positives = 88/230 (38%), Gaps = 43/230 (18%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
            A+VTG+ +G+GFA  + LA  G  VIL          +V++L+ KG   +    DV+D 
Sbjct: 11  TALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDE 70

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSF-NDIYKNTVEHAETVIRTNFYGAKLLTESLLP 150
            +IEA  S   +    +DIL+NNAG+ +   + +  +E+ + VI TN   A L++ S   
Sbjct: 71  LAIEAAFSKLDAEGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAK 130

Query: 151 LFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWK 210
                 S  +I+NI S                                    +       
Sbjct: 131 RMIARNSGGKIINIGSLTS--------------------------QAARPTVAP------ 158

Query: 211 SQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ 260
                     Y  +K  +   T  +A  +    I  N+  PG+  T M  
Sbjct: 159 ----------YTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNT 198

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* Length = 244

 Score =  130 bits (330), Expect = 7e-37
 Identities = 49/230 (21%), Positives = 79/230 (34%), Gaps = 51/230 (22%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
             +VTGA KGIG   V+ L   G  V+  +R        ++SL  +   +    +D+ D 
Sbjct: 9   RVLVTGAGKGIGRGTVQALHATGARVVAVSRTQA----DLDSLVRECPGIEPVCVDLGDW 64

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSF-NDIYKNTVEHAETVIRTNFYGAKLLTESLLP 150
            + E  +     +   +D+LVNNA V+      + T E  +     N      +++ +  
Sbjct: 65  EATERAL----GSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVAR 120

Query: 151 LFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWK 210
                     I+N+SS+                               +   SV      
Sbjct: 121 GLIARGVPGAIVNVSSQCS--------------------------QRAVTNHSV------ 148

Query: 211 SQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ 260
                     Y  +K AL+  T V+A       I VN+  P    TSM Q
Sbjct: 149 ----------YCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQ 188

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} Length = 267

 Score =  131 bits (332), Expect = 8e-37
 Identities = 43/266 (16%), Positives = 82/266 (30%), Gaps = 54/266 (20%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGL--PVNFFQLDVS 89
            A+VTG+  GIG A+   L   G  V++  R  E     ++ +  +     +     D+ 
Sbjct: 12  TALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLG 71

Query: 90  DPSSIEAFVSWFKSNFAALDILVNNAGV-SFNDIYKNTVEHAETVIRTNFYGAKLLTESL 148
                +  +      +  +DIL+NN G+    + +    E    +   N      LT S 
Sbjct: 72  TEQGCQDVI----EKYPKVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSY 127

Query: 149 LPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGT 208
           L          R++ I+S          P+           +E                 
Sbjct: 128 LKKMIERKE-GRVIFIASEAA-----IMPS-----------QEMA--------------- 155

Query: 209 WKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTAD 268
                       Y+ +K    + +  LA+   G  ++VN+  PG T T   +   +    
Sbjct: 156 -----------HYSATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVETMLNSLYP 204

Query: 269 EA----ADVGARLLLLHPQQLPTAKF 290
                  +   R +  +       + 
Sbjct: 205 NEQLTIEEAEKRFMKENRPTSIIQRL 230

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 Length = 270

 Score =  131 bits (331), Expect = 9e-37
 Identities = 56/253 (22%), Positives = 90/253 (35%), Gaps = 51/253 (20%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           + +VTG  +GIG  +V+     G  V++  +D   G+   + L        F   DV+  
Sbjct: 11  VVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPG----AVFILCDVTQE 66

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVS--FNDIYKNTVEHAETVIRTNFYGAKLLTESLL 149
             ++  VS     F  LD +VNNAG         + + +    ++  N  G   LT+  L
Sbjct: 67  DDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLAL 126

Query: 150 PLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTW 209
           P  R+  S+  ++NISS +G                           +G           
Sbjct: 127 PYLRK--SQGNVINISSLVG--------------------------AIGQAQAVP----- 153

Query: 210 KSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTADE 269
                      Y  +K A+ A T  LA      G+ VN   PG   T + +   +   D 
Sbjct: 154 -----------YVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDP 202

Query: 270 AADVGARLLLLHP 282
            A +    +L  P
Sbjct: 203 RASI-REGMLAQP 214

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 Length = 256

 Score =  130 bits (330), Expect = 9e-37
 Identities = 50/252 (19%), Positives = 73/252 (28%), Gaps = 51/252 (20%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
             +VTG  +GIG A+ +  A  G  V L       G+   E      +   FFQ+D+ D 
Sbjct: 8   GVLVTGGARGIGRAIAQAFAREGALVALCDLR-PEGKEVAE-----AIGGAFFQVDLEDE 61

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVS-FNDIYKNTVEHAETVIRTNFYGAKLLTESLLP 150
                FV         +D+LVNNA ++         +     V+  N      L+     
Sbjct: 62  RERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAR 121

Query: 151 LFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWK 210
             R+      I+N++S  G                                 +       
Sbjct: 122 EMRKV-GGGAIVNVASVQG--------------------------LFAEQENAA------ 148

Query: 211 SQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTADEA 270
                     Y  SK  L   T  LA       I VN+  PG   T       + + D  
Sbjct: 149 ----------YNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPE 198

Query: 271 ADVGARLLLLHP 282
                    LH 
Sbjct: 199 R-TRRDWEDLHA 209

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 Length = 267

 Score =  131 bits (331), Expect = 1e-36
 Identities = 55/256 (21%), Positives = 87/256 (33%), Gaps = 48/256 (18%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVN--FFQLDVS 89
           + ++TG   G+G A   RLA  G  + L     E  + +  ++ E            DVS
Sbjct: 15  VVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVS 74

Query: 90  DPSSIEAFVSWFKSNFAALDILVNNAGVS--FNDIYKNTVEHAETVIRTNFYGAKLLTES 147
           D + +EA+V+     F  +D   NNAG+    N     T    + V+  N  G  L  E 
Sbjct: 75  DEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEK 134

Query: 148 LLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDG 207
           +L + R   S   ++N +S  G                            G+  QS    
Sbjct: 135 VLKIMREQGSGM-VVNTASVGG--------------------------IRGIGNQSG--- 164

Query: 208 TWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG-QGSHT 266
                        YA +K  +   T   A  Y   GI +N+  PG   T M +       
Sbjct: 165 -------------YAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLD 211

Query: 267 ADEAADVGARLLLLHP 282
            +         + ++P
Sbjct: 212 PENPRKAAEEFIQVNP 227

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} Length = 257

 Score =  130 bits (329), Expect = 1e-36
 Identities = 47/233 (20%), Positives = 85/233 (36%), Gaps = 50/233 (21%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           + I+TG + G+G  +  R A+ G  V++T R  E+ + A   + +    +   Q+DV + 
Sbjct: 8   VVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNT 67

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSF-NDIYKNTVEHAETVIRTNFYGAKLLTESLLP 150
             I+  +      F  +DIL+NNA  +F       +V    +VI     G    ++++  
Sbjct: 68  DDIQKMIEQIDEKFGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGK 127

Query: 151 LFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWK 210
            +     K  I+N+ +                                         T+ 
Sbjct: 128 YWIEKGIKGNIINMVA-----------------------------------------TYA 146

Query: 211 SQGWPEIWTDYAVSKLALNAYTMVLAK----RYEGEGISVNSYCPGFTQTSMT 259
               P +    A +K  + A T  LA     +Y   GI VN+  PG  + +  
Sbjct: 147 WDAGPGV-IHSAAAKAGVLAMTKTLAVEWGRKY---GIRVNAIAPGPIERTGG 195

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* Length = 283

 Score =  131 bits (331), Expect = 2e-36
 Identities = 49/243 (20%), Positives = 78/243 (32%), Gaps = 46/243 (18%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILT-ARDVERGQRAVESLSEKGLPVNFFQLDVSD 90
           +A+VTGA +GIG  +   L   G  VI+  A   E  +  V ++ + G      + +V  
Sbjct: 31  VALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGV 90

Query: 91  PSSIEAFVSWFKSNFAALDILVNNAGV-SFNDIYKNTVEHAETVIRTNFYGAKLLTESLL 149
              I          F  LDI+ +N+GV SF  +   T E  + V   N  G   +     
Sbjct: 91  VEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAY 150

Query: 150 PLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTW 209
                     R++ + S  G       P                         +V     
Sbjct: 151 KHLEIG---GRLILMGSITGQA--KAVPK-----------------------HAV----- 177

Query: 210 KSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTADE 269
                      Y+ SK A+  +   +A     + I+VN   PG  +T M           
Sbjct: 178 -----------YSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPN 226

Query: 270 AAD 272
             +
Sbjct: 227 GEN 229

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} Length = 207

 Score =  128 bits (323), Expect = 3e-36
 Identities = 43/261 (16%), Positives = 78/261 (29%), Gaps = 64/261 (24%)

Query: 33  AIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPS 92
            ++TGA  G+G A  + L   G  ++L+ R           +  + LP      D++D  
Sbjct: 3   VLITGATGGLGGAFARALK--GHDLLLSGRRAGALAELAREVGARALP-----ADLADEL 55

Query: 93  SIEAFVSWFKSNFAALDILVNNAGVS-FNDIYKNTVEHAETVIRTNFYGAKLLTESLLPL 151
             +A +         LD+LV+  G +    + +   +  E ++  +   A      +L  
Sbjct: 56  EAKALLE----EAGPLDLLVHAVGKAGRASVREAGRDLVEEMLAAHLLTAAF----VLKH 107

Query: 152 FRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKS 211
            R     +R +   +                             +V +   +        
Sbjct: 108 ARFQKG-ARAVFFGAYPR--------------------------YVQVPGFAA------- 133

Query: 212 QGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSH-----T 266
                    YA +K AL AY     K    EG+ +         T +    G       +
Sbjct: 134 ---------YAAAKGALEAYLEAARKELLREGVHLVLVRLPAVATGLWAPLGGPPKGALS 184

Query: 267 ADEAADVGARLLLLHPQQLPT 287
            +EAA      L   P     
Sbjct: 185 PEEAARKVLEGLFREPVPALL 205

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 Length = 244

 Score =  129 bits (326), Expect = 3e-36
 Identities = 46/230 (20%), Positives = 74/230 (32%), Gaps = 51/230 (22%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
            A+VTGA KGIG   VK L   G  V+   R        + SL+++   +    +D+ D 
Sbjct: 9   RALVTGAGKGIGRDTVKALHASGAKVVAVTRTNS----DLVSLAKECPGIEPVCVDLGDW 64

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSF-NDIYKNTVEHAETVIRTNFYGAKLLTESLLP 150
            + E  +         +D+LVNNA +       + T E  +     N      +++ +  
Sbjct: 65  DATEKAL----GGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVAR 120

Query: 151 LFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWK 210
                     I+N+SS +                            V             
Sbjct: 121 DMINRGVPGSIVNVSSMVA--------------------------HVTFPNLIT------ 148

Query: 211 SQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ 260
                     Y+ +K A+   T  +A       I VNS  P    T M +
Sbjct: 149 ----------YSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGK 188

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} Length = 260

 Score =  129 bits (327), Expect = 3e-36
 Identities = 43/242 (17%), Positives = 76/242 (31%), Gaps = 47/242 (19%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSE--KGLPVNFFQLDVS 89
           +A+VT  + G+GFA    LA  G  ++L +R+ E+ + A   ++    G  V+    D+ 
Sbjct: 9   LAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIR 68

Query: 90  DPSSIEAFVSWFKSNFAALDILVNNAGVS-FNDIYKNTVEHAETVIRTNFYGAKLLTESL 148
           +P  I+      + +    DILV + G        +  VE  +   R     A  +    
Sbjct: 69  EPGDIDRLFEKAR-DLGGADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRA 127

Query: 149 LPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGT 208
                      R++ I S       +  P                     L L       
Sbjct: 128 AEQMVEKGW-GRMVYIGS-----VTLLRPW------------------QDLAL------- 156

Query: 209 WKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTAD 268
                         + +L +      LA      G++VN+  P    T   +      A 
Sbjct: 157 ------------SNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERAR 204

Query: 269 EA 270
            +
Sbjct: 205 RS 206

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* Length = 247

 Score =  129 bits (326), Expect = 4e-36
 Identities = 54/230 (23%), Positives = 90/230 (39%), Gaps = 46/230 (20%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
            A+VTGA +GIG A+  RLA  G TVI++  + E  + A  S+ +K         D+SDP
Sbjct: 8   TALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKAR---AIAADISDP 64

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVS-FNDIYKNTVEHAETVIRTNFYGAKLLTESLLP 150
            S++A  +  ++    +DILVNNA +  F       ++H   +I  N  G  ++T +   
Sbjct: 65  GSVKALFAEIQALTGGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTD 124

Query: 151 LFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWK 210
             R +    R+++I+S                             F G            
Sbjct: 125 QMRAAGKAGRVISIASNTF--------------------------FAGTPNM-------- 150

Query: 211 SQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ 260
                     Y  +K  +  +T  LA       I+ N+  PG  ++   +
Sbjct: 151 --------AAYVAAKGGVIGFTRALATELGKYNITANAVTPGLIESDGVK 192

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 Length = 272

 Score =  129 bits (327), Expect = 4e-36
 Identities = 49/257 (19%), Positives = 81/257 (31%), Gaps = 53/257 (20%)

Query: 25  KWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFF 84
           K  + E I ++TGA  GIG       A+L   ++L   +    +         G  V+ F
Sbjct: 27  KSVTGE-IVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTF 85

Query: 85  QLDVSDPSSIEAFVSWFKSNFAALDILVNNAGV-SFNDIYKNTVEHAETVIRTNFYGAKL 143
            +D S+   I +     K+    + ILVNNAGV   +D++       E     N      
Sbjct: 86  VVDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFW 145

Query: 144 LTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQS 203
            T++ LP   ++     I+ ++S  G    V  P +                        
Sbjct: 146 TTKAFLPAMTKNNH-GHIVTVASAAG---HVSVPFL------------------------ 177

Query: 204 VKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLA---KRYEGEGISVNSYCPGFTQTSMTQ 260
                            Y  SK A   +   L       +  G+     CP F  T   +
Sbjct: 178 ---------------LAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIK 222

Query: 261 GQGSH-----TADEAAD 272
              +        +E  +
Sbjct: 223 NPSTSLGPTLEPEEVVN 239

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* Length = 260

 Score =  128 bits (325), Expect = 6e-36
 Identities = 52/231 (22%), Positives = 84/231 (36%), Gaps = 47/231 (20%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           +A+V+G  +G+G + V+ +   G  V+      E G+     L++      +  LDV+ P
Sbjct: 9   VALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAAR---YVHLDVTQP 65

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVS-FNDIYKNTVEHAETVIRTNFYGAKLLTESLLP 150
           +  +A V    + F  L +LVNNAG+     I    +   + ++  N  G  L   +++ 
Sbjct: 66  AQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVK 125

Query: 151 LFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWK 210
             + +   S I+NISS  G                            G            
Sbjct: 126 PMKEAGRGS-IINISSIEG--------------------------LAGTVACHG------ 152

Query: 211 SQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG 261
                     Y  +K A+   T   A      GI VNS  PG  +T MT  
Sbjct: 153 ----------YTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDW 193

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A Length = 270

 Score =  129 bits (326), Expect = 6e-36
 Identities = 52/244 (21%), Positives = 84/244 (34%), Gaps = 46/244 (18%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILT-ARDVERGQRAVESLSEKGLPVNFFQLDVSD 90
           +A+VTG+ +GIG A+   L  LG  V++  A   +  ++ V  +   G      + D+  
Sbjct: 20  VALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQ 79

Query: 91  PSSIEAFVSWFKSNFAALDILVNNAGV-SFNDIYKNTVEHAETVIRTNFYGAKLLTESLL 149
              I        ++F  LDI V+N+GV SF  +   T E  + V   N  G   +     
Sbjct: 80  VPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAY 139

Query: 150 PLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTW 209
                     RI+  SS          P                         S+     
Sbjct: 140 RHLTEG---GRIVLTSSNTS--KDFSVPK-----------------------HSL----- 166

Query: 210 KSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTADE 269
                      Y+ SK A++++  + +K    + I+VN+  PG T T M      H    
Sbjct: 167 -----------YSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPN 215

Query: 270 AADV 273
               
Sbjct: 216 GTSY 219

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 Length = 263

 Score =  128 bits (325), Expect = 7e-36
 Identities = 53/231 (22%), Positives = 80/231 (34%), Gaps = 50/231 (21%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
             +VTGA  GIG A +   A  G +++   R+      AV +L  + +       DVSDP
Sbjct: 8   TILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAI---AVVADVSDP 64

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVS-FNDIYKNTVEHAETVIRTNFYGAKLLTESLLP 150
            ++EA  +     F  L  + + AGV+     +   +E  E V+R N  G+ L+      
Sbjct: 65  KAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGE 124

Query: 151 LFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWK 210
           +         ++   S  G                           +G F          
Sbjct: 125 VLEEG---GSLVLTGSVAG---------------------------LGAFGL-------- 146

Query: 211 SQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG 261
                     YA  KL +      LA     +G+ VN   PG  QT MT G
Sbjct: 147 --------AHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAG 189

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} Length = 262

 Score =  128 bits (325), Expect = 8e-36
 Identities = 42/237 (17%), Positives = 78/237 (32%), Gaps = 49/237 (20%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILT---ARDVERGQRAVESLSEKGLPVNFFQLDV 88
           + ++ G  K +G    K  A   + ++L    A+D +   +  + L ++G  V  +Q D+
Sbjct: 13  VIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDL 72

Query: 89  SDPSSIEAFVSWFKSNFAALDILVNNAGV-SFNDIYKNTVEHAETVIRTNFYGAKLLTES 147
           S+   +     + +  F  +DI +N  G      I + +    + +   N   A    + 
Sbjct: 73  SNEEEVAKLFDFAEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQ 132

Query: 148 LLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDG 207
                  +     I+ I++ L                                  S    
Sbjct: 133 AAKHMNPN---GHIITIATSLLAAY---TGF-----------------------YST--- 160

Query: 208 TWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGS 264
                        YA +K  +  YT   +K    + ISVN+  PG   TS   GQ +
Sbjct: 161 -------------YAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQET 204

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 Length = 244

 Score =  127 bits (322), Expect = 1e-35
 Identities = 47/239 (19%), Positives = 76/239 (31%), Gaps = 53/239 (22%)

Query: 32  IAIVTGANKGIGFALVKRLAELG-------LTVILTARDVERGQRAVESLSEKGLPVNFF 84
           I ++TGA KGIG A+    A            ++L++R     ++       +G   +  
Sbjct: 4   ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTI 63

Query: 85  QLDVSDPSSIEAFVSWFKSNFAALDILVNNAGVS-FNDIYKNTVEHAETVIRTNFYGAKL 143
             D+SD + +    +     +  +D LVNNAGV  F  +   T E  +  + TN  G   
Sbjct: 64  TADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFF 123

Query: 144 LTESLLPLFRRSPSKS-RILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQ 202
           LT++L  L  R    S  I  I+S           +                        
Sbjct: 124 LTQALFALMER--QHSGHIFFITSVAA---TKAFRH-----------------------S 155

Query: 203 SVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG 261
           S+                Y +SK         +        + +    PG   T M   
Sbjct: 156 SI----------------YCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGK 198

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} Length = 244

 Score =  127 bits (322), Expect = 1e-35
 Identities = 39/255 (15%), Positives = 69/255 (27%), Gaps = 55/255 (21%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           IA+VT A    G A V+ L + G TV+                SE               
Sbjct: 3   IALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESENP------GTIALAE 56

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVS----FNDIYKNTVEHAETVIRTNFYGAKLLTES 147
              E  V     +  A+D +V+N  +        +   +      +         LL +S
Sbjct: 57  QKPERLVDATLQHGEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQS 116

Query: 148 LLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDG 207
            +   R +   + ++ I+S +G                             L    +   
Sbjct: 117 AIAPLRAAGG-ASVIFITSSVG--------------------------KKPLAYNPL--- 146

Query: 208 TWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTA 267
                        Y  ++ A  A     AK    +GI + +  P F              
Sbjct: 147 -------------YGPARAATVALVESAAKTLSRDGILLYAIGPNFFNNPTYFPTSDWEN 193

Query: 268 DEAADVGARLLLLHP 282
           +   ++  R+    P
Sbjct: 194 NP--ELRERVDRDVP 206

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 Length = 253

 Score =  127 bits (323), Expect = 1e-35
 Identities = 52/258 (20%), Positives = 93/258 (36%), Gaps = 60/258 (23%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           +A+VTG   G+G  +VK L   G  V  +  +   GQ+    L E+ +   F + DVS  
Sbjct: 8   VALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSM---FVRHDVSSE 64

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVS-FNDIYKNTVEHAETVIRTN----FYGAKLLTE 146
           +     ++  +     L++LVNNAG+    D+    +E    +++ N    F G +    
Sbjct: 65  ADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQ---- 120

Query: 147 SLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKD 206
             +   +   +   I+N++S                             ++ +   +   
Sbjct: 121 QGIAAMKE--TGGSIINMASVSS--------------------------WLPIEQYAG-- 150

Query: 207 GTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRY--EGEGISVNSYCPGFTQTSMTQGQGS 264
                         Y+ SK A++A T   A     +G  I VNS  P    T M   Q S
Sbjct: 151 --------------YSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMM--QAS 194

Query: 265 HTADEAADVGARLLLLHP 282
                + ++      L+ 
Sbjct: 195 LPKGVSKEMVLHDPKLNR 212

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} Length = 250

 Score =  127 bits (322), Expect = 1e-35
 Identities = 61/256 (23%), Positives = 94/256 (36%), Gaps = 53/256 (20%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEK-GLPVNFFQLDVSD 90
           +AIVTGA+ G G A+  R    G  V       E  +    +        V   + DV+D
Sbjct: 4   VAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVAD 63

Query: 91  PSSIEAFVSWFKSNFAALDILVNNAGVS----FNDIYKNTVEHAETVIRTNFYGAKLLTE 146
              + A ++     F A+D+LVNNAG++       ++   VE  + V+  N  G  L   
Sbjct: 64  EGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCR 123

Query: 147 SLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKD 206
           ++LP      +   I+NI+S                              V    +S   
Sbjct: 124 AVLPHMLLQGA-GVIVNIASVAS--------------------------LVAFPGRSA-- 154

Query: 207 GTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHT 266
                         Y  SK A+   T  +A  Y G GI  N+ CPG  +T MTQ      
Sbjct: 155 --------------YTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQW----- 195

Query: 267 ADEAADVGARLLLLHP 282
             +  ++  ++L   P
Sbjct: 196 RLDQPELRDQVLARIP 211

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... Length = 286

 Score =  128 bits (323), Expect = 2e-35
 Identities = 53/252 (21%), Positives = 91/252 (36%), Gaps = 55/252 (21%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLP-VNFFQLDVSD 90
             IVTGA+KGIG  +   LA++G  V++TAR  E  Q+ V    E G    ++    + D
Sbjct: 30  KVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMED 89

Query: 91  PSSIEAFVSWFKSNFAALDILVNNAGVS-FNDIYKNTVEHAETVIRTNFYGAKLLTESLL 149
            +  E FV+        LD+L+ N   +   +++ + + H    +  NF    +LT + L
Sbjct: 90  MTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAAL 149

Query: 150 PLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTW 209
           P+ ++  S   I+ +SS  G                           V   + +      
Sbjct: 150 PMLKQ--SNGSIVVVSSLAG--------------------------KVAYPMVAA----- 176

Query: 210 KSQGWPEIWTDYAVSKLALNAYTMVLAK--RYEGEGISVNSYCPGFTQTSMTQG------ 261
                      Y+ SK AL+ +   + K        +S+     G   T           
Sbjct: 177 -----------YSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSGIV 225

Query: 262 -QGSHTADEAAD 272
              +   +E A 
Sbjct: 226 HMQAAPKEECAL 237

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} Length = 271

 Score =  126 bits (320), Expect = 4e-35
 Identities = 50/254 (19%), Positives = 85/254 (33%), Gaps = 55/254 (21%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           +AI+TGA  GIG    + LA  G  V+L          A  S+    +      +D+++ 
Sbjct: 13  VAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAV---HHVVDLTNE 69

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVS---FNDIYKNTVEHAETVIRTNFYGAKLLTESL 148
            S+ A + +    F  LDI+ NNA  S      + + TV+  +     N  G  L+ +  
Sbjct: 70  VSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYA 129

Query: 149 LPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGT 208
           +P    +   + I+NISS                                  + +     
Sbjct: 130 IPRLISAGGGA-IVNISSATA--------------------------HAAYDMSTA---- 158

Query: 209 WKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTAD 268
                       YA +K A+   T  +A +Y   G+  N+  PG  +T   +        
Sbjct: 159 ------------YACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLE------VG 200

Query: 269 EAADVGARLLLLHP 282
               +       H 
Sbjct: 201 LPQPIVDIFATHHL 214

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} Length = 252

 Score =  126 bits (319), Expect = 4e-35
 Identities = 40/250 (16%), Positives = 72/250 (28%), Gaps = 46/250 (18%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
              V GA   IG  + K+ A  G TV    R+ E+    V  +   G  +    LD  + 
Sbjct: 9   TVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNE 68

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGV-SFNDIYKNTVEHAETVIRTNFYGAKLLTESLLP 150
             + AF++   +  A L++ + N G      I + T      V     +   +       
Sbjct: 69  DEVTAFLNAADA-HAPLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESAR 127

Query: 151 LFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWK 210
           L      + +I    +   T S                              +       
Sbjct: 128 LMLAH-GQGKIFFTGA---TASLRGGSG-----------------------FAA------ 154

Query: 211 SQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISV-NSYCPGFTQTSMTQGQGSHTADE 269
                     +A +K  L A    +A+    + I V +        T+  + +      +
Sbjct: 155 ----------FASAKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRERREQMFGK 204

Query: 270 AADVGARLLL 279
            A     LL+
Sbjct: 205 DALANPDLLM 214

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} Length = 293

 Score =  127 bits (321), Expect = 5e-35
 Identities = 57/235 (24%), Positives = 78/235 (33%), Gaps = 46/235 (19%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLP-VNFFQLDVSD 90
             +VTG  KGIG  +    A  G  V + AR           L E G   V   +LDVSD
Sbjct: 43  SVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSD 102

Query: 91  PSSIEAFVSWFKSNFAALDILVNNAGVSFND--IYKNTVEHAETVIRTNFYGAKLLTESL 148
           P S           F ALD++  NAG+ F +  +   T E    V+  N  G     ++ 
Sbjct: 103 PGSCADAARTVVDAFGALDVVCANAGI-FPEARLDTMTPEQLSEVLDVNVKGTVYTVQAC 161

Query: 149 LPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGT 208
           L     S    R++  SS  G ++    P                    G          
Sbjct: 162 LAPLTASGR-GRVILTSSITGPVTG--YP--------------------G---------- 188

Query: 209 WKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQG 263
                    W+ Y  SK A   +    A      G++VN+  PG   T      G
Sbjct: 189 ---------WSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDMG 234

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 Length = 265

 Score =  126 bits (318), Expect = 6e-35
 Identities = 51/230 (22%), Positives = 79/230 (34%), Gaps = 37/230 (16%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEK-GLPVNFFQLDVSD 90
             IVTG N+GIG A  + +A  G  V +  R         E + ++ G+    +Q DVS+
Sbjct: 16  TIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSN 75

Query: 91  PSSIEAFVSWFKSNFAALDILVNNAGVSF-NDIYKNTVEHAETVIRTNFYGAKLLTESLL 149
              +   +    ++   +  L+ NAGVS      + T E    V   N +G      ++ 
Sbjct: 76  TDIVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVA 135

Query: 150 PLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTW 209
            L+ +   K  I+  SS    +                          G   Q       
Sbjct: 136 KLWLQKQQKGSIVVTSSMSSQIINQ-------------------SSLNGSLTQ------- 169

Query: 210 KSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMT 259
                      Y  SK A +     LA  +   GI VN+  PG+  T  T
Sbjct: 170 ---------VFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQT 210

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 246

 Score =  125 bits (317), Expect = 8e-35
 Identities = 50/252 (19%), Positives = 80/252 (31%), Gaps = 53/252 (21%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           + I+T A +GIG A     A  G  VI T  +  + Q       EK   +    LDV+  
Sbjct: 8   VIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQEL-----EKYPGIQTRVLDVTKK 62

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVS-FNDIYKNTVEHAETVIRTNFYGAKLLTESLLP 150
             I+ F     +    LD+L N AG      +     +  +  +  N     L+ ++ LP
Sbjct: 63  KQIDQFA----NEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLP 118

Query: 151 LFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWK 210
                 S + I+N+SS   ++                                       
Sbjct: 119 KMLAQKSGN-IINMSSVASSVK-------------------------------------- 139

Query: 211 SQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTADEA 270
             G       Y+ +K A+   T  +A  +  +GI  N  CPG   T   Q +     +  
Sbjct: 140 --GVVN-RCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPE 196

Query: 271 ADVGARLLLLHP 282
                  L    
Sbjct: 197 E-ARNDFLKRQK 207

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} Length = 244

 Score =  125 bits (316), Expect = 9e-35
 Identities = 42/256 (16%), Positives = 78/256 (30%), Gaps = 61/256 (23%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
             +VTG +KGIG A+V+ L +     ++     +         +E    + F + D++  
Sbjct: 6   NYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQ------SFSAEN---LKFIKADLTKQ 56

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVS-FNDIYKNTVEHAETVIRTNFYGAKLLTESLLP 150
             I   +        + D +  NAG+     I+   +E  + V+  N + +    + L  
Sbjct: 57  QDITNVLD--IIKNVSFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLEN 114

Query: 151 LFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWK 210
             +     + I+   S                             F+             
Sbjct: 115 NLKVG---ASIVFNGSDQC--------------------------FIAKPNSFA------ 139

Query: 211 SQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTADEA 270
                     Y +SK A+   T  LA       I VN+ CPG   T + +      A+  
Sbjct: 140 ----------YTLSKGAIAQMTKSLALDLAKYQIRVNTVCPGTVDTDLYRNLIQKYANNV 189

Query: 271 A----DVGARLLLLHP 282
                +   +     P
Sbjct: 190 GISFDEAQKQEEKEFP 205

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* Length = 260

 Score =  125 bits (317), Expect = 1e-34
 Identities = 60/266 (22%), Positives = 102/266 (38%), Gaps = 53/266 (19%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILT-ARDVERGQRAVESLSEK-GLPVNFFQLDVS 89
           +A+VTG+  GIG  +   LA  G  ++L    D    ++    L+ + G+ V +   D+S
Sbjct: 6   VAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLS 65

Query: 90  DPSSIEAFVSWFKSNFAALDILVNNAGVSF-NDIYKNTVEHAETVIRTNFYGAKLLTESL 148
              ++   V         +DILVNNAG+     I     E  + ++  N       T + 
Sbjct: 66  KGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAA 125

Query: 149 LPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGT 208
           LP  ++     RI+NI+S  G                           V    +S     
Sbjct: 126 LPHMKKQGF-GRIINIASAHG--------------------------LVASANKS----- 153

Query: 209 WKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTAD 268
                       Y  +K  +  +T V A    G+GI+ N+ CPG+ +T + + Q S  A+
Sbjct: 154 -----------AYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAE 202

Query: 269 E----AADVGARLLLLHPQQLPTAKF 290
           +           LL    ++ P+ +F
Sbjct: 203 KNGVDQETAARELLS---EKQPSLQF 225

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} Length = 281

 Score =  126 bits (318), Expect = 1e-34
 Identities = 61/260 (23%), Positives = 92/260 (35%), Gaps = 51/260 (19%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAV--ESLSEKGLPVNFFQLDVS 89
            A++TG+  GIG A+ + LA+ G  ++L         R V  E        V     D++
Sbjct: 27  TAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMT 86

Query: 90  DPSSIEAFVSWFKSNFAALDILVNNAGVSF-NDIYKNTVEHAETVIRTNFYGAKLLTESL 148
            PS I   ++     F   DILVNNAGV F   I    VE  + +I  N   +       
Sbjct: 87  KPSEIADMMAMVADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGA 146

Query: 149 LPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGT 208
           +P  ++     RI+NI+S  G                           V    +S     
Sbjct: 147 IPPMKKKGW-GRIINIASAHG--------------------------LVASPFKS----- 174

Query: 209 WKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTA- 267
                       Y  +K  +   T  +A      G++VNS CPG+  T + + Q    A 
Sbjct: 175 -----------AYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQAR 223

Query: 268 ----DEAADVGARLLLLHPQ 283
                E   +   +L   P 
Sbjct: 224 TRGITEEQVINEVMLKGQPT 243

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* Length = 257

 Score =  125 bits (315), Expect = 2e-34
 Identities = 48/253 (18%), Positives = 82/253 (32%), Gaps = 45/253 (17%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           I +++G   GIG A  K L   G  ++                            D+S  
Sbjct: 3   IIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVI-----------------ADLSTA 45

Query: 92  SSIEAFVS-WFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLP 150
              +  ++         +D LV  AG+          +    V+  N++GA  L ++ LP
Sbjct: 46  EGRKQAIADVLAKCSKGMDGLVLCAGLG------PQTKVLGNVVSVNYFGATELMDAFLP 99

Query: 151 LFRRSPSKSRILNISSRLGT-LSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTW 209
             ++       + ISS     L+  +NP   ++   EE     I    G    +      
Sbjct: 100 ALKKGHQ-PAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGN------ 152

Query: 210 KSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTADE 269
                      YA SK AL       A  +   G+ +N+  PG T+T + Q        +
Sbjct: 153 ---------LAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAG----LQD 199

Query: 270 AADVGARLLLLHP 282
                +    + P
Sbjct: 200 PRYGESIAKFVPP 212

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} Length = 269

 Score =  125 bits (316), Expect = 2e-34
 Identities = 56/256 (21%), Positives = 91/256 (35%), Gaps = 55/256 (21%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           +AIVTG + GIG A+V  L   G  V+  + D +      +           F++DV++ 
Sbjct: 16  VAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNVSD----------HFKIDVTNE 65

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVS-FNDIYKNTVEHAETVIRTNFYGAKLLTESLLP 150
             ++  V      +  +DILVNNAG+  ++ ++    E    +I  N  G+ L+ +  +P
Sbjct: 66  EEVKEAVEKTTKKYGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIP 125

Query: 151 LFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWK 210
           +       S I+NI+S                             +      +       
Sbjct: 126 VMLAIGHGS-IINIASVQS--------------------------YAATKNAAA------ 152

Query: 211 SQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTADEA 270
                     Y  SK AL   T  +A  Y    I  N+ CPG   T M          E 
Sbjct: 153 ----------YVTSKHALLGLTRSVAIDY-APKIRCNAVCPGTIMTPMVIKAAKMEVGED 201

Query: 271 ADVGARLLLLHPQQLP 286
            +   R +    +Q P
Sbjct: 202 ENAVERKIEEWGRQHP 217

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} Length = 259

 Score =  124 bits (314), Expect = 2e-34
 Identities = 54/231 (23%), Positives = 82/231 (35%), Gaps = 48/231 (20%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILT-ARDVERGQRAVESLSEKGLPVNFFQLDVSD 90
             +V GA + IG A   R A+ G  V+LT     E    AV  + + G      + D+++
Sbjct: 10  TIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTN 69

Query: 91  PSSIEAFVSWFKSNFAALDILVNNAGV--SFNDIYKNTVEHAETVIRTNFYGAKLLTESL 148
            + +EA +S     F  +  LV+ AG   +   I +        V+  N     L  ++ 
Sbjct: 70  AAEVEAAISAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTA 129

Query: 149 LPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGT 208
           LP   +      I+  SS+ G                                   +DG 
Sbjct: 130 LPKMAKG---GAIVTFSSQAG-----------------------------------RDGG 151

Query: 209 WKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMT 259
                       YA SK A+  +T  LAK   G  I VN+ CPG   T+  
Sbjct: 152 GPGA------LAYATSKGAVMTFTRGLAKEV-GPKIRVNAVCPGMISTTFH 195

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A Length = 255

 Score =  124 bits (313), Expect = 4e-34
 Identities = 58/257 (22%), Positives = 91/257 (35%), Gaps = 50/257 (19%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
            A+VTG+  GIG  + + LA  G  ++L          A+  ++  G+       D+SD 
Sbjct: 6   TALVTGSTSGIGLGIAQVLARAGANIVLN--GFGDPAPALAEIARHGVKAVHHPADLSDV 63

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSF-NDIYKNTVEHAETVIRTNFYGAKLLTESLLP 150
           + IEA  +  +  F  +DILVNNAG+     + +  +E  + +I  N       T   LP
Sbjct: 64  AQIEALFALAEREFGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALP 123

Query: 151 LFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWK 210
             R      RI+NI+S  G                           VG   ++       
Sbjct: 124 GMRARNW-GRIINIASVHG--------------------------LVGSTGKAA------ 150

Query: 211 SQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTA--- 267
                     Y  +K  +   T V+        ++ N+ CPG+  T + Q Q    A   
Sbjct: 151 ----------YVAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPLVQKQIDDRAANG 200

Query: 268 -DEAADVGARLLLLHPQ 283
            D        L    P 
Sbjct: 201 GDPLQAQHDLLAEKQPS 217

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A Length = 264

 Score =  124 bits (313), Expect = 4e-34
 Identities = 49/256 (19%), Positives = 85/256 (33%), Gaps = 60/256 (23%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           + IVTGA+ GIG A+ +R  + G  VI  +       +               + DV++P
Sbjct: 10  VVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPGEAKYD-----------HIECDVTNP 58

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVS-FNDIYKNTVEHAETVIRTNFYGAKLLTESLLP 150
             ++A +      + ++ +LVNNAG+  +  I   ++     +I  N +G    ++  +P
Sbjct: 59  DQVKASIDHIFKEYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIP 118

Query: 151 LFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWK 210
              RS     I+NISS                              +     S       
Sbjct: 119 YMIRS-RDPSIVNISSVQA--------------------------SIITKNASA------ 145

Query: 211 SQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG----QGSHT 266
                     Y  SK A+   T  +A  Y    +  N+ CP    T + +     +    
Sbjct: 146 ----------YVTSKHAVIGLTKSIALDY-APLLRCNAVCPATIDTPLVRKAAELEVGSD 194

Query: 267 ADEAADVGARLLLLHP 282
                   +     HP
Sbjct: 195 PMRIEKKISEWGHEHP 210

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} Length = 260

 Score =  124 bits (313), Expect = 4e-34
 Identities = 47/248 (18%), Positives = 81/248 (32%), Gaps = 54/248 (21%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
             ++TGA++ +G     RL E G  VI++ R       +V  L + G        D S  
Sbjct: 29  PILITGASQRVGLHCALRLLEHGHRVIISYR---TEHASVTELRQAG--AVALYGDFSCE 83

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPL 151
           + I AF+   K+  ++L  +V+NA     +      ++   +   +     L+     PL
Sbjct: 84  TGIMAFIDLLKTQTSSLRAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPL 143

Query: 152 FRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKS 211
              S   + I++IS  +      R  + K I                             
Sbjct: 144 LTASEV-ADIVHISDDVT-----RKGSSKHI----------------------------- 168

Query: 212 QGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTADEAA 271
                    Y  +K  L + T+  A R+    + VN   P               A   A
Sbjct: 169 --------AYCATKAGLESLTLSFAARF-APLVKVNGIAPALLMFQPKD-----DAAYRA 214

Query: 272 DVGARLLL 279
           +  A+  L
Sbjct: 215 NALAKSAL 222

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} Length = 250

 Score =  123 bits (312), Expect = 4e-34
 Identities = 46/231 (19%), Positives = 72/231 (31%), Gaps = 54/231 (23%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
              VTGA KGIG+A      E G  V    +          + +++  P     +DV+D 
Sbjct: 9   NVWVTGAGKGIGYATALAFVEAGAKVTGFDQ----------AFTQEQYPFATEVMDVADA 58

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGV-SFNDIYKNTVEHAETVIRTNFYGAKLLTESLLP 150
           + +        +    LD LVN AG+       + + E  +     N  GA  L +  + 
Sbjct: 59  AQVAQVCQRLLAETERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMN 118

Query: 151 LFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWK 210
            FRR      I+ ++S                                            
Sbjct: 119 QFRRQRG-GAIVTVASDAA--------------------------HTPRIGM-------- 143

Query: 211 SQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG 261
                   + Y  SK AL +  + +     G G+  N   PG T T M + 
Sbjct: 144 --------SAYGASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRT 186

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* Length = 254

 Score =  123 bits (312), Expect = 4e-34
 Identities = 52/230 (22%), Positives = 83/230 (36%), Gaps = 45/230 (19%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
            A VTGA  GIG  + +  A  G  +IL  R+     RA + L            DV+D 
Sbjct: 13  CAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAV--AARIVADVTDA 70

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSF-NDIYKNTVEHAETVIRTNFYGAKLLTESLLP 150
            ++ A  +  ++  A + ILVN+AG++  +D  +        V+  N  G    + +   
Sbjct: 71  EAMTAAAAEAEA-VAPVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGR 129

Query: 151 LFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWK 210
                 +   I+N+ S  G                           +    Q        
Sbjct: 130 AMVARGA-GAIVNLGSMSG--------------------------TIVNRPQFA------ 156

Query: 211 SQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ 260
                   + Y  SK A++  T  LA  + G G+ VN+  PG+  T MT 
Sbjct: 157 --------SSYMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTL 198

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 Length = 267

 Score =  124 bits (313), Expect = 4e-34
 Identities = 61/231 (26%), Positives = 100/231 (43%), Gaps = 44/231 (19%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEK-GLPVNFFQLDVSD 90
           +A+VTG ++G+GF + + LAE G +V++ +R++E    A + L+EK G+    F+ DVS+
Sbjct: 23  VALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSN 82

Query: 91  PSSIEAFVSWFKSNFAALDILVNNAGVSF-NDIYKNTVEHAETVIRTNFYGAKLLTESLL 149
              ++  +   K  F  LD +VN AG++  +   +  ++    VI  N +G   +     
Sbjct: 83  YEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAF 142

Query: 150 PLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTW 209
            L R S +   I+NI S                                           
Sbjct: 143 SLLRESDN-PSIINIGSLTV--------------------------EEV----------- 164

Query: 210 KSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ 260
                P I + YA SK  + + T  LAK +   GI VN   PG+ +T MT+
Sbjct: 165 ---TMPNI-SAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTE 211

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} Length = 245

 Score =  123 bits (312), Expect = 4e-34
 Identities = 55/253 (21%), Positives = 79/253 (31%), Gaps = 56/253 (22%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           IA+VTGA  G+G  +VK L+     V    R+ E      E    + +       D+   
Sbjct: 7   IAVVTGATGGMGIEIVKDLSRDH-IVYALGRNPEHLAALAEIEGVEPIE-----SDIVKE 60

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVS-FNDIYKNTVEHAETVIRTNFYGAKLLTESLLP 150
              E  V   K N   +D LV+ A V+    I   +V      +  N      L+  LLP
Sbjct: 61  VLEEGGVDKLK-NLDHVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLP 119

Query: 151 LFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWK 210
             R   +   ++ I+S  G      +P                                 
Sbjct: 120 ALRA--ASGCVIYINSGAGNGP---HPG-------------------------------- 142

Query: 211 SQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTADEA 270
                   T YA SK AL        K     GI V++  PG T T M         D  
Sbjct: 143 -------NTIYAASKHALRGLADAFRKEEANNGIRVSTVSPGPTNTPML----QGLMDSQ 191

Query: 271 ADVGARLLLLHPQ 283
                  + + P+
Sbjct: 192 GTNFRPEIYIEPK 204

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 Length = 279

 Score =  123 bits (312), Expect = 7e-34
 Identities = 58/287 (20%), Positives = 104/287 (36%), Gaps = 51/287 (17%)

Query: 3   SQEPDPNYFSSSSSSSSLVSSTKWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTAR 62
           S   +  YF    +   +    +W  +  +A+VTGA+ GIG A+ + L + GL V+  AR
Sbjct: 10  SSGRENLYFQGHMARPGM---ERWRDR--LALVTGASGGIGAAVARALVQQGLKVVGCAR 64

Query: 63  DVERGQRAVESLSEKGLPVNF--FQLDVSDPSSIEAFVSWFKSNFAALDILVNNAGVSFN 120
            V   +         G P     ++ D+S+   I +  S  +S  + +DI +NNAG++  
Sbjct: 65  TVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLARP 124

Query: 121 D-IYKNTVEHAETVIRTNFYGAKLLTESLLPLFR-RSPSKSRILNISSRLGTLSKVRNPN 178
           D +   +    + +   N     + T       + R+     I+NI+S  G   +V   +
Sbjct: 125 DTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSG--HRVLPLS 182

Query: 179 IKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAK- 237
           +                                         Y+ +K A+ A T  L + 
Sbjct: 183 VTHF--------------------------------------YSATKYAVTALTEGLRQE 204

Query: 238 -RYEGEGISVNSYCPGFTQTSMTQGQGSHTADEAADVGARLLLLHPQ 283
            R     I      PG  +T           ++AA    ++  L P+
Sbjct: 205 LREAQTHIRATCISPGVVETQFAFKLHDKDPEKAAATYEQMKCLKPE 251

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} Length = 260

 Score =  123 bits (311), Expect = 7e-34
 Identities = 43/238 (18%), Positives = 70/238 (29%), Gaps = 53/238 (22%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           + +VTGA++GIG  +  +L + G TV +T R ++  +   +     G        D S  
Sbjct: 7   VCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQE 66

Query: 92  SSIEAFVSW-FKSNFAALDILVNNAGVSFNDIYKN--------TVEHAETVIRTNFYGAK 142
           S + +      +     LD+LVNNA      I                + +      G  
Sbjct: 67  SEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHY 126

Query: 143 LLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQ 202
             +     L   +     I+ ISS       ++                           
Sbjct: 127 FCSVYGARLMVPAGQ-GLIVVISSPGS----LQYMF------------------------ 157

Query: 203 SVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ 260
                             Y V K A +      A      G+S  S  PG  QT + +
Sbjct: 158 ---------------NVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLK 200

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* Length = 281

 Score =  123 bits (311), Expect = 1e-33
 Identities = 41/260 (15%), Positives = 77/260 (29%), Gaps = 57/260 (21%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           +A++TG   G+G ALV R    G  V +  +  ER +    +     +       DV   
Sbjct: 7   VALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGNAV---GVVGDVRSL 63

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVS-FNDIYKNTVEHA-----ETVIRTNFYGAKLLT 145
              +       + F  +D L+ NAG+  ++    +  E       + +   N  G     
Sbjct: 64  QDQKRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAV 123

Query: 146 ESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVK 205
           ++ LP      S+  ++   S  G                          F       + 
Sbjct: 124 KACLPALVS--SRGSVVFTISNAG--------------------------FYPNGGGPL- 154

Query: 206 DGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSH 265
                          Y  +K A+      +A       + VN   PG   T +       
Sbjct: 155 ---------------YTATKHAVVGLVRQMAFEL-APHVRVNGVAPGGMNTDLRGPSSLG 198

Query: 266 TADEAAD---VGARLLLLHP 282
            ++++     +   L  + P
Sbjct: 199 LSEQSISSVPLADMLKSVLP 218

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* Length = 302

 Score =  123 bits (312), Expect = 1e-33
 Identities = 47/282 (16%), Positives = 94/282 (33%), Gaps = 56/282 (19%)

Query: 1   MKSQEPDPNYFSSSSSSS----SLVSSTKWWSKETIAIVTGANKGIGFALVKRLAELGLT 56
           M ++     +FS    +     S         +  +A +TG   G+G  +   L+ LG  
Sbjct: 1   MNTEALQSKFFSPLQKAMLPPNSF--------QGKVAFITGGGTGLGKGMTTLLSSLGAQ 52

Query: 57  VILTARDVERGQRAVESL-SEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDILVNNA 115
            ++ +R ++  +   E + S+ G  V+  Q DV DP  ++  VS         +I++NNA
Sbjct: 53  CVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGHPNIVINNA 112

Query: 116 GVSF-NDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKV 174
             +F +   + +    +T+      G   +T  +     ++   +  L+I++        
Sbjct: 113 AGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYA----- 167

Query: 175 RNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMV 234
                                  G                       A +K  + A +  
Sbjct: 168 ---------------------ETGSGFVVP----------------SASAKAGVEAMSKS 190

Query: 235 LAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTADEAADVGAR 276
           LA  +   G+  N   PG  +T     +   T     ++  R
Sbjct: 191 LAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGR 232

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 245

 Score =  121 bits (305), Expect = 3e-33
 Identities = 53/231 (22%), Positives = 90/231 (38%), Gaps = 52/231 (22%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
             ++TGA  GIG A ++  A+ G  ++    +    + A E++           +DV+DP
Sbjct: 7   AVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHP-----VVMDVADP 61

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSFND--IYKNTVEHAETVIRTNFYGAKLLTESLL 149
           +S+E   +   ++   LD +V+ AG++  D   +K  +E  E V+R N  G+ L+ ++  
Sbjct: 62  ASVERGFAEALAHLGRLDGVVHYAGIT-RDNFHWKMPLEDWELVLRVNLTGSFLVAKAAS 120

Query: 150 PLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTW 209
              R       I+  +SR+                            +G   Q       
Sbjct: 121 EAMREKNP-GSIVLTASRVY---------------------------LGNLGQ------- 145

Query: 210 KSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ 260
                     +YA S   +   T  LA      GI VN+  PGF +T MT 
Sbjct: 146 ---------ANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTA 187

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} Length = 274

 Score =  121 bits (306), Expect = 5e-33
 Identities = 47/265 (17%), Positives = 92/265 (34%), Gaps = 62/265 (23%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQR-------AVESLSEKG---LPV 81
              +TGA++GIG A+  R A  G  V + A+      +       A  +++  G   L +
Sbjct: 8   TLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLAL 67

Query: 82  NFFQLDVSDPSSIEAFVSWFKSNFAALDILVNNAGV-SFNDIYKNTVEHAETVIRTNFYG 140
              + D+ +   + A V+     F  +DILVNNA            ++  + + + N  G
Sbjct: 68  ---KCDIREEDQVRAAVAATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARG 124

Query: 141 AKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLF 200
           + +  ++ LP   ++P+   IL ++                                   
Sbjct: 125 SFVCAQACLPHLLQAPNP-HILTLAPPPSLNPA--------------------------- 156

Query: 201 LQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFT-QTSMT 259
                        W    T Y ++K+ ++  T+ LA  +  +G+++N+  P     T   
Sbjct: 157 -------------WWGAHTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDAI 203

Query: 260 QGQGSH------TADEAADVGARLL 278
                         +  AD    +L
Sbjct: 204 NMLPGVDAAACRRPEIMADAAHAVL 228

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} Length = 264

 Score =  121 bits (305), Expect = 6e-33
 Identities = 46/234 (19%), Positives = 82/234 (35%), Gaps = 47/234 (20%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTAR-DVERGQRAVESLSEKGLPVNFFQLDVSD 90
            A++T   KG+G  + ++L   G +V +T   D    +   E+  +    + F Q DV+ 
Sbjct: 9   HALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTK 68

Query: 91  PSSIEAFVSWFKSNFAALDILVNNAGVSF---NDIYKNTVEHAETVIRTNFYGAKLLTES 147
              +   V    S+F  +D L+NNAG        +     +    +I+ N      L + 
Sbjct: 69  KEDLHKIVEEAMSHFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKL 128

Query: 148 LLPLFRRSPSKS-RILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKD 206
           ++P+ R+      RI+N   +                                       
Sbjct: 129 VVPVMRK--QNFGRIINYGFQ-------------GA--------------DSA------- 152

Query: 207 GTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ 260
                 GW    + +A +K+ L + T  +A      GI+ N  CPG     M +
Sbjct: 153 -----PGWIY-RSAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKE 200

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} Length = 279

 Score =  121 bits (305), Expect = 7e-33
 Identities = 47/233 (20%), Positives = 91/233 (39%), Gaps = 45/233 (19%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           +A VTG++ GIG+A+ +  A+ G  V +        ++A       G+    ++ ++SDP
Sbjct: 36  VASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDP 95

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSFND---IYKNTVEHAETVIRTNFYGAKLLTESL 148
            S+E  +S  + +F  +D+ V NAGV++     I  +  +    +I  +  G    + ++
Sbjct: 96  KSVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNI 155

Query: 149 LPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGT 208
             +F+++     ++  SS  G +      NI                             
Sbjct: 156 GKIFKKNGK-GSLIITSSISGKIV-----NI----------------------------- 180

Query: 209 WKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG 261
                 P++   Y  +K A       LA  +      VN+  PG+  T +T  
Sbjct: 181 ------PQLQAPYNTAKAACTHLAKSLAIEW-APFARVNTISPGYIDTDITDF 226

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* Length = 254

 Score =  120 bits (303), Expect = 8e-33
 Identities = 37/232 (15%), Positives = 64/232 (27%), Gaps = 53/232 (22%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
            AIVT      G     RL+E G TV       ++          +     + QL     
Sbjct: 3   TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDEL------EAFAETYPQLKPMSE 56

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVS--FNDIYKNTVEHAETVIRTNFYGAKLLTESLL 149
                 +    S +  +D+LV+N   +  F  I K  VE     +         L  ++ 
Sbjct: 57  QEPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVA 116

Query: 150 PLFRRSPSKS-RILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGT 208
              ++   KS  I+ I+S                                          
Sbjct: 117 SQMKK--RKSGHIIFITSATP--------------------------------------- 135

Query: 209 WKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ 260
                W E+ + Y  ++         L+K      I V +  P +  +  + 
Sbjct: 136 --FGPWKEL-STYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSP 184

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} Length = 285

 Score =  121 bits (305), Expect = 9e-33
 Identities = 45/235 (19%), Positives = 83/235 (35%), Gaps = 50/235 (21%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQR-------AVESLSEKGLPVNFF 84
              ++G ++GIG A+ KR+A  G  V L A+  E   +       A + + E G      
Sbjct: 11  TMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPI 70

Query: 85  QLDVSDPSSIEAFVSWFKSNFAALDILVNNAGV-SFNDIYKNTVEHAETVIRTNFYGAKL 143
             D+ D  ++ A V+     F  +DI VNNA   +   I +  ++  + +      G   
Sbjct: 71  VGDIRDGDAVAAAVAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYA 130

Query: 144 LTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQS 203
           +++S +P  +   +   IL +S  +    K   P                          
Sbjct: 131 VSQSCIPHMKGRDNP-HILTLSPPIRLEPKWLRP-------------------------- 163

Query: 204 VKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSM 258
                          T Y ++K  +    + +A+     GI+ N+  P  T  + 
Sbjct: 164 ---------------TPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVATA 203

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} Length = 346

 Score =  121 bits (306), Expect = 2e-32
 Identities = 57/280 (20%), Positives = 98/280 (35%), Gaps = 60/280 (21%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERG-------QRAVESLSEKGLPVNFF 84
              +TGA++GIG A+  + A+ G  +++ A+  +           A E +   G      
Sbjct: 47  TVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPC 106

Query: 85  QLDVSDPSSIEAFVSWFKSNFAALDILVNNAGV-SFNDIYKNTVEHAETVIRTNFYGAKL 143
            +DV D   I A V      F  +DILVNNA   S  +      +  + ++  N  G  L
Sbjct: 107 IVDVRDEQQISAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYL 166

Query: 144 LTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQS 203
            +++ +P  ++S   + ILNIS  L                                   
Sbjct: 167 ASKACIPYLKKSKV-AHILNISPPLNLNPV------------------------------ 195

Query: 204 VKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFT-QTSMTQGQ 262
                     W +    Y ++K  ++ Y + +A+ +    I+VN+  P     T+     
Sbjct: 196 ----------WFKQHCAYTIAKYGMSMYVLGMAEEF-KGEIAVNALWPKTAIHTAAMDML 244

Query: 263 GSH-------TADEAADVGARLLLLHPQQLPTAKFYIGLD 295
           G           D  AD  A   +    +  T  F I  +
Sbjct: 245 GGPGIESQCRKVDIIAD--AAYSIFQKPKSFTGNFVIDEN 282

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} Length = 260

 Score =  119 bits (301), Expect = 2e-32
 Identities = 54/252 (21%), Positives = 91/252 (36%), Gaps = 61/252 (24%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           + ++TGA++GIG  LV+   +    V+ T+R ++               ++    D+S P
Sbjct: 30  VVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSADPD---------IHTVAGDISKP 80

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVS-FNDIYKNTVEHAETVIRTNFYGAKLLTESLLP 150
            + +  V      F  +D LVNNAGV       + T E  +  +  N  G   +T+    
Sbjct: 81  ETADRIVREGIERFGRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAA 140

Query: 151 LFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWK 210
              +  S   I++I++ L     V  P+                                
Sbjct: 141 EMLKQGS-GHIVSITTSLVDQPMVGMPSAL------------------------------ 169

Query: 211 SQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTADEA 270
                      +++K  LNA T  LA  +   G+ VN+  PG  +T M            
Sbjct: 170 ----------ASLTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMH----------P 209

Query: 271 ADVGARLLLLHP 282
           A+  + L  LHP
Sbjct: 210 AETHSTLAGLHP 221

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} Length = 230

 Score =  118 bits (298), Expect = 2e-32
 Identities = 40/256 (15%), Positives = 77/256 (30%), Gaps = 58/256 (22%)

Query: 31  TIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSD 90
           ++ ++TGA+ G+G  L K     G    LT R   +       LS           D++ 
Sbjct: 2   SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYR---ARDLAS 58

Query: 91  PSSIEAFVSWFKSNFAALDILVNNAGVS-FNDIYKNTVEHAETVIRTNFYGAKLLTESLL 149
              +E          +    +V++AG   F  + +   E  +T+I  N   A  +   L+
Sbjct: 59  HQEVEQLFEQL---DSIPSTVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELV 115

Query: 150 PLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTW 209
             ++       ++ I S                                   +S      
Sbjct: 116 KRYKD--QPVNVVMIMSTAA--------------------------QQPKAQEST----- 142

Query: 210 KSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSH---- 265
                      Y   K A+      +    +G+ + + +  PG   T   +  G      
Sbjct: 143 -----------YCAVKWAVKGLIESVRLELKGKPMKIIAVYPGGMATEFWETSGKSLDTS 191

Query: 266 ---TADEAADVGARLL 278
              +A++AA +    L
Sbjct: 192 SFMSAEDAALMIHGAL 207

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} Length = 270

 Score =  119 bits (301), Expect = 2e-32
 Identities = 67/237 (28%), Positives = 100/237 (42%), Gaps = 58/237 (24%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           +AIVTGA++GIG A+   LA  G  VI TA      +    +  + GL      L+V+D 
Sbjct: 30  VAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDA 89

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTV------EHAETVIRTNFYGAKLLT 145
           ++++A V      F AL++LVNNAG     I ++ +      +  + VI TN      L+
Sbjct: 90  TAVDALVESTLKEFGALNVLVNNAG-----ITQDQLAMRMKDDEWDAVIDTNLKAVFRLS 144

Query: 146 ESLLPLF--RRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQS 203
            ++L      R     RI+NI+S +G+     NP                    G   Q 
Sbjct: 145 RAVLRPMMKARG---GRIVNITSVVGSAG---NP--------------------G---Q- 174

Query: 204 VKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ 260
                           +YA +K  +   T  LA+     GI+VN   PGF  T MT+
Sbjct: 175 ---------------VNYAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTK 216

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 Length = 285

 Score =  119 bits (302), Expect = 3e-32
 Identities = 60/236 (25%), Positives = 94/236 (39%), Gaps = 56/236 (23%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           +A+VTGA +GIG  + K LA+    VI  +R  +     V+ +   G   + +  DVS  
Sbjct: 46  VALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKK 105

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTV------EHAETVIRTNFYGAKLLT 145
             I   ++   +    +DILVNNAG     I ++ +      +  E V+RTN      +T
Sbjct: 106 EEISEVINKILTEHKNVDILVNNAG-----ITRDNLFLRMKNDEWEDVLRTNLNSLFYIT 160

Query: 146 ESLLPLFRRSPSKS-RILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSV 204
           + +        ++  RI+NISS +G      N                     G   Q  
Sbjct: 161 QPISKRMIN--NRYGRIINISSIVGLTG---NV--------------------G---Q-- 190

Query: 205 KDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ 260
                          +Y+ SK  +  +T  LAK      I+VN+  PGF  + MT 
Sbjct: 191 --------------ANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTD 232

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 Length = 303

 Score =  120 bits (303), Expect = 3e-32
 Identities = 49/247 (19%), Positives = 82/247 (33%), Gaps = 50/247 (20%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLP-----VNFFQL 86
           +AIVTG   GIG A+VK L ELG  V++ +R +ER + A + L     P     V   Q 
Sbjct: 20  VAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQC 79

Query: 87  DVSDPSSIEAFVSWFKSNFAALDILVNNAGVSF-NDIYKNTVEHAETVIRTNFYGAKLLT 145
           ++ +   +   V      F  ++ LVNN G  F +     + +    V+ TN  G   + 
Sbjct: 80  NIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMC 139

Query: 146 ESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVK 205
           +++   + +      I+NI                                         
Sbjct: 140 KAVYSSWMKEHG-GSIVNIIVPTKA----------------------------------- 163

Query: 206 DGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSH 265
                  G+P        ++  +   T  LA  +   GI +N   PG   +         
Sbjct: 164 -------GFPLA-VHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGS 215

Query: 266 TADEAAD 272
                 +
Sbjct: 216 WGQSFFE 222

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} Length = 264

 Score =  119 bits (300), Expect = 4e-32
 Identities = 63/239 (26%), Positives = 91/239 (38%), Gaps = 53/239 (22%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNF-------F 84
           +A+VTGA  GIG A+  RLA  G TV     D    Q  V  L   G            F
Sbjct: 9   LALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAF 68

Query: 85  QLDVSDPSSIEAFVSWFKSNF-AALDILVNNAGVSFND--IYKNTVEHAETVIRTNFYGA 141
           Q DVS+  +    +   ++ F     ++V+ AG++  D  +   + +  + VI  N  G 
Sbjct: 69  QADVSEARAARCLLEQVQACFSRPPSVVVSCAGIT-QDEFLLHMSEDDWDKVIAVNLKGT 127

Query: 142 KLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFL 201
            L+T++       +  +  I+NISS +G +    N                     G   
Sbjct: 128 FLVTQAAAQALVSNGCRGSIINISSIVGKVG---NV--------------------G--- 161

Query: 202 QSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ 260
           Q                T+YA SK  +   T   A+     GI  NS  PGF  T MTQ
Sbjct: 162 Q----------------TNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQ 204

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* Length = 277

 Score =  119 bits (300), Expect = 4e-32
 Identities = 51/247 (20%), Positives = 83/247 (33%), Gaps = 45/247 (18%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEK-GLPVNFFQLDVSD 90
           +A +TG   GIGF + +     G   ++ +R + R   A   L+   G       +DV  
Sbjct: 29  VAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRA 88

Query: 91  PSSIEAFVSWFKSNFAALDILVNNAGVSF-NDIYKNTVEHAETVIRTNFYGAKLLTESLL 149
           P ++ A V      F  +DIL+N A  +F       +    +TV+  +  G   ++  L 
Sbjct: 89  PPAVMAAVDQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLY 148

Query: 150 PLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTW 209
             F R      I+NI++ LG                            G  LQ       
Sbjct: 149 EKFFRDHG-GVIVNITATLG--------------------------NRGQALQV------ 175

Query: 210 KSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTADE 269
                         +K A++A T  LA  +  + I VNS  PG    +    +       
Sbjct: 176 ----------HAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLGGPQAS 225

Query: 270 AADVGAR 276
            +     
Sbjct: 226 LSTKVTA 232

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} Length = 235

 Score =  117 bits (296), Expect = 6e-32
 Identities = 39/137 (28%), Positives = 70/137 (51%), Gaps = 3/137 (2%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEK-GLPVNFFQLDVSD 90
           +A++TGA++GIG A+ + LA  G  + L AR V+R ++    L ++ G+ V +  LDVS 
Sbjct: 4   VAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSK 63

Query: 91  PSSIEAFVSWFKSNFAALDILVNNAGVSFND-IYKNTVEHAETVIRTNFYGAKLLTESLL 149
             S+E F       F  +D++V NAG+ +   + + + E    +I  N  G     ++ L
Sbjct: 64  AESVEEFSKKVLERFGDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFL 123

Query: 150 PLFRRSPSKSRILNISS 166
              +R+     ++  S 
Sbjct: 124 DSLKRTGG-LALVTTSD 139

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} Length = 247

 Score =  117 bits (297), Expect = 6e-32
 Identities = 65/236 (27%), Positives = 101/236 (42%), Gaps = 58/236 (24%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           +A+VTGA++GIGF +   LA  G TV+ TA      ++   S+ EKG       L++SD 
Sbjct: 7   VALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDI 66

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTV------EHAETVIRTNFYGAKLLT 145
            SI+ F +  K+   A+DILVNNAG     I ++ +      +  ++VI TN      ++
Sbjct: 67  ESIQNFFAEIKAENLAIDILVNNAG-----ITRDNLMMRMSEDEWQSVINTNLSSIFRMS 121

Query: 146 ESLLPLF--RRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQS 203
           +  +     +R     RI++I S +G+     NP                    G   Q 
Sbjct: 122 KECVRGMMKKRW---GRIISIGSVVGSAG---NP--------------------G---Q- 151

Query: 204 VKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMT 259
                          T+Y  +K  +  ++  LA       I+VN   PGF  T MT
Sbjct: 152 ---------------TNYCAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMT 192

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* Length = 278

 Score =  118 bits (297), Expect = 1e-31
 Identities = 44/252 (17%), Positives = 76/252 (30%), Gaps = 46/252 (18%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           +AI+TG   GIG    K     G  V++     + GQ+   ++      ++F   DV+  
Sbjct: 18  VAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPD-VISFVHCDVTKD 76

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVS---FNDIYKNTVEHAETVIRTNFYGAKLLTESL 148
             +   V    +    LDI+  N GV       I +   E  + V+  N YGA L+ +  
Sbjct: 77  EDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHA 136

Query: 149 LPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGT 208
             +   +   S I+  +S                                          
Sbjct: 137 ARVMIPAKKGS-IVFTASISSFT------------------------------------- 158

Query: 209 WKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTAD 268
                   +   Y  +K A+   T  L       GI VN   P    + +        + 
Sbjct: 159 ----AGEGVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSS 214

Query: 269 EAADVGARLLLL 280
              ++  +   L
Sbjct: 215 RVEELAHQAANL 226

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Length = 251

 Score =  116 bits (293), Expect = 2e-31
 Identities = 29/233 (12%), Positives = 49/233 (21%), Gaps = 61/233 (26%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
             +V G +  +G  +VK         I                         F +  S  
Sbjct: 24  NILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNADH------------SFTIKDSGE 71

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGV--SFNDIYKNTVEHAETVIRTNFYGAKLLTESLL 149
             I++ +    S    +D  V  AG     N      ++  + +I  N Y A        
Sbjct: 72  EEIKSVIEKINSKSIKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGA 131

Query: 150 PLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTW 209
            L  +       +   +                                           
Sbjct: 132 KLLNQG---GLFVLTGASAAL--------------------------------------- 149

Query: 210 KSQGWPEIWTDYAVSKLALNAYTMVLAKRYEG--EGISVNSYCPGFTQTSMTQ 260
                      Y  +K A +     LA    G   G +     P    T   +
Sbjct: 150 --NRTSG-MIAYGATKAATHHIIKDLASENGGLPAGSTSLGILPVTLDTPTNR 199

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} Length = 273

 Score =  117 bits (295), Expect = 2e-31
 Identities = 50/232 (21%), Positives = 79/232 (34%), Gaps = 50/232 (21%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
            A+VTGA  GIG A+    A  G  V+   R  +  +   + +++ G        D++D 
Sbjct: 33  TAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT-DGVKEVADEIADGGGSAEAVVADLADL 91

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSF-NDIYKNTVEHAETVIRTNFYGAKLLTESLLP 150
                      +    +D+LVNNAG+       + ++     V+  N   A +L+ S   
Sbjct: 92  EGAANVAEELAA-TRRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGT 150

Query: 151 LF--RRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGT 208
                 S    RI+ I+S L                                        
Sbjct: 151 AMLAHGS---GRIVTIASMLSFQGGRNVAA------------------------------ 177

Query: 209 WKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ 260
                       YA SK A+   T  LA  + G G+ VN+  PG+  T+ T 
Sbjct: 178 ------------YAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTA 217

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} Length = 247

 Score =  116 bits (293), Expect = 3e-31
 Identities = 61/231 (26%), Positives = 99/231 (42%), Gaps = 47/231 (20%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILT-ARDVERGQRAVESLSEKGLPVNFFQLDVSD 90
            AIVTG+++G+G A+  +L  +G  ++L  +          E     G+ V   + DV +
Sbjct: 7   TAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKN 66

Query: 91  PSSIEAFVSWFKSNFAALDILVNNAGVSFND--IYKNTVEHAETVIRTNFYGAKLLTESL 148
           P  +E  V      F  +DILVNNAG++  D  + K + +  + V+ TN   A L T+++
Sbjct: 67  PEDVENMVKTAMDAFGRIDILVNNAGIT-RDTLMLKMSEKDWDDVLNTNLKSAYLCTKAV 125

Query: 149 LPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGT 208
             +  +  S  +I+NI+S  G +    N                     G   Q      
Sbjct: 126 SKIMLKQKS-GKIINITSIAGIIG---NA--------------------G---Q------ 152

Query: 209 WKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMT 259
                      +YA SK  L  +T  +AK +  +GI  N+  PG  +T MT
Sbjct: 153 ----------ANYAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMT 193

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} Length = 272

 Score =  116 bits (293), Expect = 4e-31
 Identities = 45/137 (32%), Positives = 66/137 (48%), Gaps = 3/137 (2%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
              +TGA  G G A  +R AE G +++LT R  ER Q     LS K   V    LDV D 
Sbjct: 23  TLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKT-RVLPLTLDVRDR 81

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSF--NDIYKNTVEHAETVIRTNFYGAKLLTESLL 149
           +++ A V      FA L  L+NNAG++   +      ++  +T++ TN  G    T  LL
Sbjct: 82  AAMSAAVDNLPEEFATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLL 141

Query: 150 PLFRRSPSKSRILNISS 166
           P      + + I+N+ S
Sbjct: 142 PRLIAHGAGASIVNLGS 158

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} Length = 256

 Score =  115 bits (291), Expect = 5e-31
 Identities = 59/232 (25%), Positives = 93/232 (40%), Gaps = 49/232 (21%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILT-ARDVERGQRAVESLSEKGLPVNFFQLDVSD 90
           IA VTG   GIG ++ +RL + G  V+     +  R  + +E     G      + +V D
Sbjct: 15  IAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGD 74

Query: 91  PSSIEAFVSWFKSNFAALDILVNNAGVSF-NDIYKNTVEHAETVIRTNFYGAKLLTESLL 149
             S +      K+    +D+LVNNAG++      K T E  + VI TN      +T+ ++
Sbjct: 75  WDSTKQAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVI 134

Query: 150 PLF--RRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDG 207
                R      RI+NISS  G                            G F Q     
Sbjct: 135 DGMVERGW---GRIINISSVNGQ--------------------------KGQFGQ----- 160

Query: 208 TWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMT 259
                      T+Y+ +K  ++ +TM LA+    +G++VN+  PG+  T M 
Sbjct: 161 -----------TNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMV 201

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} Length = 234

 Score =  115 bits (290), Expect = 5e-31
 Identities = 52/250 (20%), Positives = 76/250 (30%), Gaps = 58/250 (23%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
             ++TGA++GIG A  + L   G  V L ARD +R Q     L            DV + 
Sbjct: 7   AVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEG----ALPLPGDVREE 62

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSFND-IYKNTVEHAETVIRTNFYGAKLLTESLLP 150
                 V+  +  F  L  LVNNAGV     +++ T+E    V+ TN  GA L     +P
Sbjct: 63  GDWARAVAAMEEAFGELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVP 122

Query: 151 LFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWK 210
              R    + I+N+ S  G                                         
Sbjct: 123 ALLRRGGGT-IVNVGSLAGK---------------------------------------- 141

Query: 211 SQGWPEIWTDYAV---SKLALNAYTMVLAKRYEGEGISVNSYCPGFTQT----SMTQGQG 263
                  +   A    SK  L               + V +  PG   T    +      
Sbjct: 142 -----NPFKGGAAYNASKFGLLGLAGAAMLDLREANVRVVNVLPGSVDTGFAGNTPGQAW 196

Query: 264 SHTADEAADV 273
               ++ A  
Sbjct: 197 KLKPEDVAQA 206

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} Length = 269

 Score =  115 bits (291), Expect = 8e-31
 Identities = 56/233 (24%), Positives = 95/233 (40%), Gaps = 51/233 (21%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILT-ARDVERGQRAVESLSEKGLPVNFFQLDVSD 90
           +A VTG   G+G A+ +RL + G+ V ++ +   +     +    + G     + +DV+D
Sbjct: 27  VAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVAD 86

Query: 91  PSSIEAFVSWFKSNFAALDILVNNAGVSFND--IYKNTVEHAETVIRTNFYGAKLLTESL 148
             S E       ++F  +D+L+NNAG++  D    K T    + V+RT+      +T+  
Sbjct: 87  FESCERCAEKVLADFGKVDVLINNAGIT-RDATFMKMTKGDWDAVMRTDLDAMFNVTKQF 145

Query: 149 LPLF--RRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKD 206
           +     RR     RI+NI S  G+                           G F Q    
Sbjct: 146 IAGMVERRF---GRIVNIGSVNGS--------------------------RGAFGQ---- 172

Query: 207 GTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMT 259
                        +YA +K  ++ +T  LA      GI+VN+  PG+  T+M 
Sbjct: 173 ------------ANYASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMV 213

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* Length = 247

 Score =  114 bits (289), Expect = 8e-31
 Identities = 46/136 (33%), Positives = 70/136 (51%), Gaps = 3/136 (2%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           +A++TGA+ GIG A  + LA  G  V + AR VE+ +   + L+  G  V+  +LDV+D 
Sbjct: 9   VALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADR 68

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSFND-IYKNTVEHAETVIRTNFYGAKLLTESLLP 150
             ++A V+        LDILVNNAG+     +          +I TN  G   +T + LP
Sbjct: 69  QGVDAAVASTVEALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALP 128

Query: 151 LFRRSPSKSRILNISS 166
              R  SK  ++ +SS
Sbjct: 129 HLLR--SKGTVVQMSS 142

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} Length = 246

 Score =  114 bits (287), Expect = 2e-30
 Identities = 62/237 (26%), Positives = 97/237 (40%), Gaps = 57/237 (24%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVIL-TARDVERGQRAVESLSEKGLPVNFFQLDVSD 90
           +A+VTGA++GIG A+   LA+ G  V++  A + ++    V+ + + G      + DV++
Sbjct: 6   VALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVAN 65

Query: 91  PSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTV------EHAETVIRTNFYGAKLL 144
              +   V      F  +DILVNNAG     + K+ +      E  +TVI TN  G  L 
Sbjct: 66  AEDVTNMVKQTVDVFGQVDILVNNAG-----VTKDNLLMRMKEEEWDTVINTNLKGVFLC 120

Query: 145 TESLLPLFRRSPSKS-RILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQS 203
           T+++     R   +  RI+NI+S +G      NP                          
Sbjct: 121 TKAVSRFMMR--QRHGRIVNIASVVGVTG---NP-------------------------- 149

Query: 204 VKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ 260
                   Q       +Y  +K  +   T   AK      I+VN+  PGF  T MT 
Sbjct: 150 -------GQ------ANYVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDMTD 193

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G Length = 244

 Score =  114 bits (287), Expect = 2e-30
 Identities = 56/236 (23%), Positives = 96/236 (40%), Gaps = 57/236 (24%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVIL-TARDVERGQRAVESLSEKGLPVNFFQLDVSD 90
           + +VTGA++GIG A+   L + G  V++  AR  +  +   + +   G     F  DVS 
Sbjct: 3   VVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSK 62

Query: 91  PSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTV------EHAETVIRTNFYGAKLL 144
            + +EA +      +  +D++VNNAG     I ++T+         + VI  N  G  L 
Sbjct: 63  EADVEAMMKTAIDAWGTIDVVVNNAG-----ITRDTLLIRMKKSQWDEVIDLNLTGVFLC 117

Query: 145 TESLLPLFRRSPSKS-RILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQS 203
           T++   +  +   +  RI+NI+S +G +    N                     G   Q 
Sbjct: 118 TQAATKIMMK--KRKGRIINIASVVGLIG---NI--------------------G---Q- 148

Query: 204 VKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMT 259
                           +YA +K  +  ++   A+      I+VN  CPGF  + MT
Sbjct: 149 ---------------ANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMT 189

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* Length = 248

 Score =  114 bits (287), Expect = 2e-30
 Identities = 47/137 (34%), Positives = 70/137 (51%), Gaps = 6/137 (4%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           I +VTGA  G G  + +R  + G  VI T R  ER Q   + L +        QLDV + 
Sbjct: 2   IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIA---QLDVRNR 58

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSF--NDIYKNTVEHAETVIRTNFYGAKLLTESLL 149
           ++IE  ++   + +  +DILVNNAG++      +K +VE  ET+I TN  G   +T ++L
Sbjct: 59  AAIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVL 118

Query: 150 PLFRRSPSKSRILNISS 166
           P          I+NI S
Sbjct: 119 PGMVERNH-GHIINIGS 134

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} PDB: 3sj7_A* Length = 246

 Score =  113 bits (285), Expect = 3e-30
 Identities = 63/238 (26%), Positives = 99/238 (41%), Gaps = 59/238 (24%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVIL-TARDVERGQRAVESLSEKGLPVNFFQLDVSD 90
            A+VTGA++GIG ++  +LAE G  V +  A   E+ +  VE +  KG+     Q +V+D
Sbjct: 6   SALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVAD 65

Query: 91  PSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTV------EHAETVIRTNFYGAKLL 144
              ++A +    S F +LD+LVNNAG     I ++ +      +  + VI TN  G    
Sbjct: 66  ADEVKAMIKEVVSQFGSLDVLVNNAG-----ITRDNLLMRMKEQEWDDVIDTNLKGVFNC 120

Query: 145 TESLLPLF--RRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQ 202
            +   P    +RS     I+N+SS +G +    NP                         
Sbjct: 121 IQKATPQMLRQRS---GAIINLSSVVGAVG---NP------------------------- 149

Query: 203 SVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ 260
                    Q       +Y  +K  +   T   A+     GI+VN+  PGF  + MT 
Sbjct: 150 --------GQ------ANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTD 193

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* Length = 248

 Score =  112 bits (284), Expect = 4e-30
 Identities = 62/238 (26%), Positives = 100/238 (42%), Gaps = 59/238 (24%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEK-GLPVNFFQLDVSD 90
           +++VTG+ +GIG A+ ++LA  G TVI+T    ER +   E ++ K G+  +  ++++  
Sbjct: 9   VSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLS 68

Query: 91  PSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTV------EHAETVIRTNFYGAKLL 144
             SI        +    +DILVNNAG     I ++ +         E V++ N  G  L+
Sbjct: 69  EESINKAFEEIYNLVDGIDILVNNAG-----ITRDKLFLRMSLLDWEEVLKVNLTGTFLV 123

Query: 145 TESLLPLF--RRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQ 202
           T++ L     +R     RI+NISS +G      N                          
Sbjct: 124 TQNSLRKMIKQRW---GRIVNISSVVGFTG---NV------------------------- 152

Query: 203 SVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ 260
                    Q       +Y+ +K  L  +T  LAK      + VN+  PGF +T MT 
Sbjct: 153 --------GQ------VNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTA 196

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* Length = 269

 Score =  113 bits (285), Expect = 5e-30
 Identities = 62/235 (26%), Positives = 97/235 (41%), Gaps = 55/235 (23%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILT-ARDVERGQRAVESLSEKGLPVNFFQLDVSD 90
           IA+VTGA++GIG A+   LA  G  V +  A         V +++  G      + DVS 
Sbjct: 30  IALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQ 89

Query: 91  PSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTV------EHAETVIRTNFYGAKLL 144
            S +EA  +     +  LD+LVNNAG     I ++T+      +  ++V+  N  G  L 
Sbjct: 90  ESEVEALFAAVIERWGRLDVLVNNAG-----ITRDTLLLRMKRDDWQSVLDLNLGGVFLC 144

Query: 145 TESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSV 204
           + +   +  +  S  RI+NI+S +G +    NP                           
Sbjct: 145 SRAAAKIMLKQRS-GRIINIASVVGEMG---NP--------------------------- 173

Query: 205 KDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMT 259
                  Q       +Y+ +K  +   T  +AK     GI+VN+  PGF  T MT
Sbjct: 174 ------GQ------ANYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMT 216

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} Length = 264

 Score =  113 bits (284), Expect = 6e-30
 Identities = 40/136 (29%), Positives = 64/136 (47%), Gaps = 2/136 (1%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           + ++TGA+ GIG  + + L   G  ++L AR   R +     + + G       LDV+D 
Sbjct: 6   VILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDR 65

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSFND-IYKNTVEHAETVIRTNFYGAKLLTESLLP 150
            S+ AF       +  +D+LVNNAGV     +    V+  E +I  N  G      ++LP
Sbjct: 66  HSVAAFAQAAVDTWGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLP 125

Query: 151 LFRRSPSKSRILNISS 166
           +     S  +I+NI S
Sbjct: 126 IMEAQRS-GQIINIGS 140

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB: 3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E Length = 248

 Score =  112 bits (283), Expect = 6e-30
 Identities = 65/237 (27%), Positives = 103/237 (43%), Gaps = 61/237 (25%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           +A+VTGA++GIG A+ + LAE G  VI TA      Q   + L + G       L+V++P
Sbjct: 11  VALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGK---GMALNVTNP 67

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTV------EHAETVIRTNFYGAKLLT 145
            SIEA +      F  +DILVNNAG     I ++ +      E    ++ TN      L+
Sbjct: 68  ESIEAVLKAITDEFGGVDILVNNAG-----ITRDNLLMRMKEEEWSDIMETNLTSIFRLS 122

Query: 146 ESLLPLF--RRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQS 203
           +++L     +R     RI+N+ S +GT+    N                           
Sbjct: 123 KAVLRGMMKKRQ---GRIINVGSVVGTMG---NA-------------------------- 150

Query: 204 VKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ 260
                   Q       +YA +K  +  +T  +A+     G++VN+  PGF +T MT+
Sbjct: 151 -------GQ------ANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTK 194

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* Length = 276

 Score =  113 bits (284), Expect = 9e-30
 Identities = 44/258 (17%), Positives = 73/258 (28%), Gaps = 64/258 (24%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILT-ARDVERGQRAVESL-SEKGLPVNFFQLDVS 89
            A++TG  + IG ++  RL + G  V++         QR V  L + +       + D+S
Sbjct: 13  AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLS 72

Query: 90  DPSSI----EAFVSWFKSNFAALDILVNNAGV------------SFNDIYKNTVEHAETV 133
             SS+    E  +      F   D+LVNNA              +     K        +
Sbjct: 73  LSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAEL 132

Query: 134 IRTNFYGAKLLTESLLPLFRRSPS----KSRILNISSRLGTLSKVRNPNIKSILEDEELS 189
             +N      L  +         +       ++N+   +  L     P            
Sbjct: 133 FGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLP---LPG----------- 178

Query: 190 EEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSY 249
                         V                Y ++K AL   T   A       I VN+ 
Sbjct: 179 ------------FCV----------------YTMAKHALGGLTRAAALELAPRHIRVNAV 210

Query: 250 CPGFTQTSMTQGQGSHTA 267
            PG +       Q +   
Sbjct: 211 APGLSLLPPAMPQETQEE 228

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A Length = 239

 Score =  111 bits (281), Expect = 1e-29
 Identities = 48/230 (20%), Positives = 80/230 (34%), Gaps = 51/230 (22%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
            A+VTG ++GIG A+ + L   G  V + +R+ E   +++ ++            D+ + 
Sbjct: 4   KALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEAAQSLGAV--------PLPTDL-EK 54

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSF-NDIYKNTVEHAETVIRTNFYGAKLLTESLLP 150
              +  V         L +LV+ A V+      + + E    V+  +   A LL ++  P
Sbjct: 55  DDPKGLVKRALEALGGLHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAP 114

Query: 151 LFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWK 210
               +    R+L I S                             F       +      
Sbjct: 115 HMAEAGW-GRVLFIGSVTT--------------------------FTAGGPVPI------ 141

Query: 211 SQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ 260
                     Y  +K AL   T  LAK +   GI VN  CPG+ +T  T 
Sbjct: 142 --------PAYTTAKTALLGLTRALAKEWARLGIRVNLLCPGYVETEFTL 183

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A Length = 266

 Score =  111 bits (280), Expect = 3e-29
 Identities = 59/237 (24%), Positives = 91/237 (38%), Gaps = 61/237 (25%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
            A+VTGA  GIG A+ +     G  V L     ++ +     L +       F  ++SD 
Sbjct: 29  KALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVF---VFSANLSDR 85

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTV------EHAETVIRTNFYGAKLLT 145
            SI+      +     +DILVNNAG     I ++ +      +  + V+  N   A  LT
Sbjct: 86  KSIKQLAEVAEREMEGIDILVNNAG-----ITRDGLFVRMQDQDWDDVLAVNLTAASTLT 140

Query: 146 ESLLPLF--RRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQS 203
             L+     RR     RI+NI+S +G +    NP                    G   Q 
Sbjct: 141 RELIHSMMRRRY---GRIINITSIVGVVG---NP--------------------G---Q- 170

Query: 204 VKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ 260
                          T+Y  +K  L  ++  LA+      I+VN   PGF +++MT 
Sbjct: 171 ---------------TNYCAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTD 212

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} Length = 324

 Score =  112 bits (281), Expect = 5e-29
 Identities = 46/250 (18%), Positives = 78/250 (31%), Gaps = 48/250 (19%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVE-----RGQRAVESLSEKGLPVNFFQL 86
           I ++TGA+ G G    + LA  G  V  + RD+        +       +  + +   +L
Sbjct: 7   IILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLEL 66

Query: 87  DVSDPSSIEAFVSWFKSNFAALDILVNNAGV-SFNDIYKNTVEHAETVIRTNFYGAKLLT 145
           DV    S++  +         +D+L++NAG   F      T E    +   N    + + 
Sbjct: 67  DVQSQVSVDRAIDQIIGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVN 126

Query: 146 ESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVK 205
            + LP  RR      ++ ISS                                       
Sbjct: 127 RAALPHMRRQKH-GLLIWISSSSSAG---------------------------------- 151

Query: 206 DGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSH 265
            GT            Y  +K A++A  +  A+     GI  +   PG   +       S 
Sbjct: 152 -GTPPYLAP------YFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTNHFAHSG 204

Query: 266 TADEAADVGA 275
             D+ A    
Sbjct: 205 VPDDHARQAE 214

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} Length = 245

 Score =  109 bits (276), Expect = 6e-29
 Identities = 66/239 (27%), Positives = 97/239 (40%), Gaps = 60/239 (25%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVIL-TARDVERGQRAVESLSEKGLP-VNFFQLDVS 89
            A++TGA++GIG A+  RLAE G  + +   ++ E+ +   E    +G P V     ++ 
Sbjct: 3   KALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLL 62

Query: 90  DPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTV------EHAETVIRTNFYGAKL 143
           +  +  A V         LD LVNNAG     I ++T+      E  E V+  N      
Sbjct: 63  EAEAATALVHQAAEVLGGLDTLVNNAG-----ITRDTLLVRMKDEDWEAVLEANLSAVFR 117

Query: 144 LTESLLPLF--RRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFL 201
            T   + L    R     RI+NI+S +G L    NP                    G   
Sbjct: 118 TTREAVKLMMKARF---GRIVNITSVVGILG---NP--------------------G--- 148

Query: 202 QSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ 260
           Q                 +Y  SK  L  +T  +AK Y   GI+VN+  PGF +T MT+
Sbjct: 149 Q----------------ANYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTE 191

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} PDB: 3gdf_A Length = 267

 Score =  109 bits (276), Expect = 1e-28
 Identities = 46/235 (19%), Positives = 85/235 (36%), Gaps = 47/235 (20%)

Query: 32  IAIVTGA--NKGIGFALVKRLAELGLTVILT-ARDVERGQRAVESLSEK-GLPVNFFQLD 87
           + +VTGA   KG+G    +  AE+G  V +T A   +  +  V+ L +  G+    ++  
Sbjct: 22  VVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQ 81

Query: 88  VSDPSSIEAFVSWFKSNFAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTE 146
           V    S E  V    ++F  +D  + NAG + +  I   +VE    V++ +  G     +
Sbjct: 82  VDSYESCEKLVKDVVADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAK 141

Query: 147 SLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKD 206
           ++   F+   +   ++  +S  G ++                   Q              
Sbjct: 142 AVGHHFKERGT-GSLVITASMSGHIANFPQE--------------Q-------------- 172

Query: 207 GTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG 261
                       T Y V+K         LA  +  +   VNS  PG+  T ++  
Sbjct: 173 ------------TSYNVAKAGCIHMARSLANEW-RDFARVNSISPGYIDTGLSDF 214

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... Length = 288

 Score =  110 bits (276), Expect = 2e-28
 Identities = 56/285 (19%), Positives = 89/285 (31%), Gaps = 73/285 (25%)

Query: 1   MKSQEPDPNYFSS-SSSSSSLVSSTKWWSKETIAIVTGANKGIGFALVKRLAELGLTVIL 59
           M S     ++ S      S +        +   A+VTGA K IG A+  +L + G  V++
Sbjct: 1   MGSSHHHHHHSSGLVPRGSHM--------EAPAAVVTGAAKRIGRAIAVKLHQTGYRVVI 52

Query: 60  T-ARDVERGQRAVESLSEK-GLPVNFFQLDVSD----PSSIEAFVSWFKSNFAALDILVN 113
                 E      + L+++        Q D+++    P+S E  ++     F   D+LVN
Sbjct: 53  HYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINSCFRAFGRCDVLVN 112

Query: 114 NAGVSF-----------NDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSP-----S 157
           NA   +           N   K        +I TN     LLT S     + +      S
Sbjct: 113 NASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSS 172

Query: 158 KSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEI 217
              I+N+   +                                  S+             
Sbjct: 173 NLSIVNLCDAMV--------------------------DQPCMAFSL------------- 193

Query: 218 WTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ 262
              Y + K AL   T   A      GI VN   PG +   +  G+
Sbjct: 194 ---YNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPVAMGE 235

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} Length = 249

 Score =  108 bits (272), Expect = 3e-28
 Identities = 56/236 (23%), Positives = 91/236 (38%), Gaps = 65/236 (27%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
            +++TGA+ GIG A+ + L +LG  VI++  + E+ +    +L +          ++++ 
Sbjct: 16  TSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYT---IEVCNLANK 72

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTV------EHAETVIRTNFYGAKLLT 145
                 +    S  + LDILV NAG     I  +T+      +  + VI  N     +L 
Sbjct: 73  EECSNLI----SKTSNLDILVCNAG-----ITSDTLAIRMKDQDFDKVIDINLKANFILN 123

Query: 146 ESLLPLF--RRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQS 203
              +     +R     RI+NISS +G      NP                    G   Q 
Sbjct: 124 REAIKKMIQKRY---GRIINISSIVGIAG---NP--------------------G---Q- 153

Query: 204 VKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMT 259
                           +Y  SK  L   T  L+      GI+VN+  PGF ++ MT
Sbjct: 154 ---------------ANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMT 194

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} Length = 277

 Score =  108 bits (271), Expect = 6e-28
 Identities = 52/269 (19%), Positives = 73/269 (27%), Gaps = 56/269 (20%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILT-------------ARDVERGQRAVESLSEKG 78
           +A +TGA +G G A   R+A  G  +I                   +     V  +    
Sbjct: 13  VAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAAN 72

Query: 79  LPVNFFQLDVSDPSSIEAFVSWFKSNFAALDILVNNAGV-SFNDIYKNTVEHAETVIRTN 137
             +    +D  D   +   V    +    LDI+V NAGV +       T E    V+  N
Sbjct: 73  RRIVAAVVDTRDFDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDIN 132

Query: 138 FYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFV 197
             G      +  P          I+ ISS  G                            
Sbjct: 133 VTGTWNTVMAGAPRIIEGGRGGSIILISSAAG--------------------------MK 166

Query: 198 GLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTS 257
                                  Y  SK A+       A       I VNS  PG   T 
Sbjct: 167 MQPFMIH----------------YTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTP 210

Query: 258 MTQGQGSHTADEAADVGARLLLLHPQQLP 286
           M  G       +A +   +L  +    LP
Sbjct: 211 MGSGDMVTAVGQAMETNPQLSHVLTPFLP 239

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} Length = 202

 Score =  105 bits (265), Expect = 8e-28
 Identities = 34/247 (13%), Positives = 67/247 (27%), Gaps = 72/247 (29%)

Query: 33  AIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPS 92
            ++ GA+  +G A+ +RL +    VI   R                       +D+++  
Sbjct: 6   ILLIGASGTLGSAVKERLEKKA-EVITAGRHSGD-----------------VTVDITNID 47

Query: 93  SIEAFVSWFKSNFAALDILVNNAGV-SFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPL 151
           SI+            +D +V+  G  +F+ + + T E     I +   G   L    +  
Sbjct: 48  SIKKMY----EQVGKVDAIVSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDS 103

Query: 152 FRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKS 211
                 K      +  +                                           
Sbjct: 104 LND---KGSFTLTTGIMME----------------------------------------- 119

Query: 212 QGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQG---SHTAD 268
               +     A++  A+ A+    A      GI +N+  P   + S  + +         
Sbjct: 120 DPIVQ-GASAAMANGAVTAFAKSAAIEM-PRGIRINTVSPNVLEESWDKLEPFFEGFLPV 177

Query: 269 EAADVGA 275
            AA V  
Sbjct: 178 PAAKVAR 184

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} Length = 287

 Score =  107 bits (269), Expect = 1e-27
 Identities = 42/162 (25%), Positives = 75/162 (46%), Gaps = 10/162 (6%)

Query: 12  SSSSSSSSLVSSTKWWSKETIAIVTGANKGIGFALVKRLAELGLT---VILTARDVERGQ 68
             S  S    ++ +   K    ++TGA+ GIG A      E       +IL AR +E+ +
Sbjct: 17  RGSHMSQGRKAAERLAKK--TVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLE 74

Query: 69  RAVESLSEKGLPVNF--FQLDVSDPSSIEAFVSWFKSNFAALDILVNNAGVSF--NDIYK 124
              +++ ++         QLD++    I+ F+      F  +DILVNNAG +   + + +
Sbjct: 75  ELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQ 134

Query: 125 NTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISS 166
              E  + V  TN      +T+++LP+F+   S   I+N+ S
Sbjct: 135 IATEDIQDVFDTNVTALINITQAVLPIFQAKNS-GDIVNLGS 175

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} Length = 281

 Score =  106 bits (268), Expect = 2e-27
 Identities = 56/242 (23%), Positives = 91/242 (37%), Gaps = 47/242 (19%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           + +VTGA+ G G A+ +     G TVI TAR  E     V +  ++   +    LDV+D 
Sbjct: 7   VWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAI---SLDVTDG 63

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVS-FNDIYKNTVEHAETVIRTNFYGAKLLTESLLP 150
             I+   +   + +  +D+LVNNAG +      + T      +   + +G   LT +LLP
Sbjct: 64  ERIDVVAADVLARYGRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLP 123

Query: 151 LFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWK 210
             R   S   ++NISS  G                           +     S       
Sbjct: 124 QMRERGS-GSVVNISSFGG--------------------------QLSFAGFSA------ 150

Query: 211 SQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTADEA 270
                     Y+ +K AL   +  LA      GI V    PG  +T++     ++ ++E 
Sbjct: 151 ----------YSATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEEN 200

Query: 271 AD 272
             
Sbjct: 201 PA 202

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* Length = 265

 Score =  106 bits (267), Expect = 2e-27
 Identities = 47/245 (19%), Positives = 82/245 (33%), Gaps = 57/245 (23%)

Query: 29  KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDV 88
           K  +A++TG   G+G A  +RL   G + +L       G+   + L   G    F   DV
Sbjct: 11  KGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL---GNNCVFAPADV 67

Query: 89  SDPSSIEAFVSWFKSNFAALDILVNNAG-------VSFNDIYKNTVEHAETVIRTNFYGA 141
           +    ++  ++  K  F  +D+ VN AG        +      +T+E  + V+  N  G 
Sbjct: 68  TSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGT 127

Query: 142 KLLT-ESLLPLFRRSPSKS----RILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERF 196
             +       + +  P +      I+N +S                          +  F
Sbjct: 128 FNVIRLVAGEMGQNEPDQGGQRGVIINTAS--------------------------VAAF 161

Query: 197 VGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQT 256
            G   Q                  Y+ SK  +   T+ +A+     GI V +  PG   T
Sbjct: 162 EGQVGQ----------------AAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGT 205

Query: 257 SMTQG 261
            +   
Sbjct: 206 PLLTS 210

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} Length = 257

 Score =  105 bits (265), Expect = 3e-27
 Identities = 57/243 (23%), Positives = 86/243 (35%), Gaps = 55/243 (22%)

Query: 29  KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDV 88
           K  + IVTGA+ G+G A+ + LA+ G TV+        G+     L   G  V F   DV
Sbjct: 6   KSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAEL---GAAVRFRNADV 62

Query: 89  SDPSSIEAFVSWFKSNFAALDILVNNAGVSFND-IYKNTVEHA----ETVIRTNFYGAKL 143
           ++ +   A +++ K  F  +  LVN AG +  + I   +  HA       +  N  G   
Sbjct: 63  TNEADATAALAFAKQEFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFN 122

Query: 144 LT-ESLLPLFRRSPSKS----RILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVG 198
           +   +   + +  P        I+N +S                          I  F G
Sbjct: 123 MIRLAAEVMSQGEPDADGERGVIVNTAS--------------------------IAAFDG 156

Query: 199 LFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSM 258
              Q                  YA SK  + A T+  A+     GI V +  PG   T M
Sbjct: 157 QIGQ----------------AAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPM 200

Query: 259 TQG 261
             G
Sbjct: 201 MAG 203

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} Length = 255

 Score =  105 bits (264), Expect = 5e-27
 Identities = 48/252 (19%), Positives = 83/252 (32%), Gaps = 45/252 (17%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           +  +TG+  GIG AL + LA  G TVI   R     +  + +   +   V      +   
Sbjct: 3   VIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEADLSTPGGRETAV---AAVLDRC 59

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPL 151
                           LD LV  AGV        T  ++  V+  N++G   L + L   
Sbjct: 60  -------------GGVLDGLVCCAGVGV------TAANSGLVVAVNYFGVSALLDGLAEA 100

Query: 152 FRRSPSKSRILNISSRLGTL-SKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWK 210
             R   +   + + S   T       P ++++L  +E    ++    G    +       
Sbjct: 101 LSRG-QQPAAVIVGSIAATQPGAAELPMVEAMLAGDEARAIELAEQQGQTHLA------- 152

Query: 211 SQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTADEA 270
                     YA SK A+          + G G+ +N   PG  +T + Q        + 
Sbjct: 153 ----------YAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQAS----KADP 198

Query: 271 ADVGARLLLLHP 282
               +    + P
Sbjct: 199 RYGESTRRFVAP 210

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} Length = 253

 Score =  104 bits (262), Expect = 8e-27
 Identities = 49/237 (20%), Positives = 83/237 (35%), Gaps = 69/237 (29%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
             +VTG N+GIG A+ +  A+ G  V +T R  E  +  +             + D++D 
Sbjct: 23  SVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPEGFLA-----------VKCDITDT 71

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTV------EHAETVIRTNFYGAKLLT 145
             +E      +     +++L+ NAG     + K+ +      E   +V+ TN  G   + 
Sbjct: 72  EQVEQAYKEIEETHGPVEVLIANAG-----VTKDQLLMRMSEEDFTSVVETNLTGTFRVV 126

Query: 146 ESLLPLF--RRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQS 203
           +         +     R++ ISS +G L    +               Q           
Sbjct: 127 KRANRAMLRAKK---GRVVLISSVVGLLG---SAG-------------Q----------- 156

Query: 204 VKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ 260
                           +YA SK  L  +   LA+      I+ N   PGF  T MT+
Sbjct: 157 ---------------ANYAASKAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTK 198

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} Length = 281

 Score =  105 bits (263), Expect = 1e-26
 Identities = 46/244 (18%), Positives = 80/244 (32%), Gaps = 56/244 (22%)

Query: 29  KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDV 88
           +   AIV+G   G+G A V+RL   GL V++     E+G+   + L   G    F   +V
Sbjct: 29  EGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADEL---GNRAEFVSTNV 85

Query: 89  SDPSSIEAFVSWFKSNFAALDILVNNAGVSF------NDIYKNTVEHAETVIRTN----F 138
           +   S+ A +            +V + G          D     +      I       +
Sbjct: 86  TSEDSVLAAIEAANQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTY 145

Query: 139 YGAKLLTESLLPL-FRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFV 197
             A+L+  S+     R +  +  ++  +S                          I  + 
Sbjct: 146 NVARLVAASIAAAEPRENGERGALVLTAS--------------------------IAGYE 179

Query: 198 GLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTS 257
           G   Q                T YA +K  +   T+  A+     GI VN+  PG  +T 
Sbjct: 180 GQIGQ----------------TAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTP 223

Query: 258 MTQG 261
           + + 
Sbjct: 224 IMES 227

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} Length = 280

 Score =  104 bits (262), Expect = 2e-26
 Identities = 57/268 (21%), Positives = 86/268 (32%), Gaps = 56/268 (20%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILT-------------ARDVERGQRAVESLSEKG 78
           +A +TGA +G G +   RLA  G  +I                   E        + ++G
Sbjct: 17  VAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQG 76

Query: 79  LPVNFFQLDVSDPSSIEAFVSWFKSNFAALDILVNNAGV-SFNDIYKNTVEHAETVIRTN 137
                  LDV D +++   V+     F  LD++V NAGV S+  +++ T E  +TVI  N
Sbjct: 77  RKALTRVLDVRDDAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVN 136

Query: 138 FYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFV 197
             G      + +P    + +   I+ +SS  G                            
Sbjct: 137 LTGTWRTLRATVPAMIEAGNGGSIVVVSSSAG--------------------------LK 170

Query: 198 GLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTS 257
                                  Y+ SK  L A T  LA      GI VNS  P   +T 
Sbjct: 171 ATPGN----------------GHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETP 214

Query: 258 MTQGQGSHTADEAADVGARLLLLHPQQL 285
           M + +                   P Q 
Sbjct: 215 MIEPEAMMEIFARHPSFVHSFPPMPVQP 242

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A Length = 247

 Score =  103 bits (259), Expect = 2e-26
 Identities = 47/237 (19%), Positives = 81/237 (34%), Gaps = 69/237 (29%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
             +VTG N+GIG A+ +RLA  G  V +T R     +                ++DV+D 
Sbjct: 17  SVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLFG-----------VEVDVTDS 65

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTV------EHAETVIRTNFYGAKLLT 145
            +++   +  + +   +++LV+NAG     +  +        E  E VI  N  GA  + 
Sbjct: 66  DAVDRAFTAVEEHQGPVEVLVSNAG-----LSADAFLMRMTEEKFEKVINANLTGAFRVA 120

Query: 146 ESLLPLF--RRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQS 203
           +         +     R++ I S  G        N             Q           
Sbjct: 121 QRASRSMQRNKF---GRMIFIGSVSGLWG---IGN-------------Q----------- 150

Query: 204 VKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ 260
                           +YA SK  +      +A+      ++ N   PG+  T MT+
Sbjct: 151 ---------------ANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTR 192

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} Length = 266

 Score =  103 bits (259), Expect = 2e-26
 Identities = 37/137 (27%), Positives = 67/137 (48%), Gaps = 10/137 (7%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESL-SEKGLPVNFFQLDVSD 90
           + ++TGA+ GIG A+ +R +E G  ++L AR VER    +++L     L     Q+DV+D
Sbjct: 18  LVVITGASSGIGEAIARRFSEEGHPLLLLARRVER----LKALNLPNTLCA---QVDVTD 70

Query: 91  PSSIEAFVSWFKSNFAALDILVNNAGVSFND-IYKNTVEHAETVIRTNFYGAKLLTESLL 149
             + +  ++  +  +   D +VNNAG+     I        + +   N  G     +++L
Sbjct: 71  KYTFDTAITRAEKIYGPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVL 130

Query: 150 PLFRRSPSKSRILNISS 166
              +     + I+NISS
Sbjct: 131 APMKARNCGT-IINISS 146

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} Length = 278

 Score =  101 bits (255), Expect = 1e-25
 Identities = 52/267 (19%), Positives = 79/267 (29%), Gaps = 53/267 (19%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILT------------ARDVERGQRAVESLSEKGL 79
           +A +TGA +G G A   RLA  G  +I                  E     V+ + + G 
Sbjct: 15  VAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGS 74

Query: 80  PVNFFQLDVSDPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFY 139
            +   Q DV D  S+ A +         LDI+V NAG++         +    VI  N  
Sbjct: 75  RIVARQADVRDRESLSAALQAGLDELGRLDIVVANAGIAPMSA---GDDGWHDVIDVNLT 131

Query: 140 GAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGL 199
           G     +  +P   +  +   I+ ISS  G                              
Sbjct: 132 GVYHTIKVAIPTLVKQGTGGSIVLISSSAG------------------------------ 161

Query: 200 FLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMT 259
               +        G       Y  +K  +     V A    G+ I VNS  P   +T M 
Sbjct: 162 ----LAGVGSADPG----SVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMI 213

Query: 260 QGQGSHTADEAADVGARLLLLHPQQLP 286
             + +                    +P
Sbjct: 214 NNEFTREWLAKMAAATDTPGAMGNAMP 240

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} Length = 287

 Score =  101 bits (254), Expect = 2e-25
 Identities = 54/274 (19%), Positives = 88/274 (32%), Gaps = 57/274 (20%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVIL---------------TARDVERGQRAVESLSE 76
           + +VTG  +G G +   +LAE G  +IL               T+RD+E     VE    
Sbjct: 12  VVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGR 71

Query: 77  KGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRT 136
           K       ++DV D +++   ++   + F  LD++V NAG+         V+        
Sbjct: 72  KAY---TAEVDVRDRAAVSRELANAVAEFGKLDVVVANAGIC-PLGAHLPVQAFADAFDV 127

Query: 137 NFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERF 196
           +F G      + LP        + I+   S  G                           
Sbjct: 128 DFVGVINTVHAALPYLTSG---ASIITTGSVAG--------------------------L 158

Query: 197 VGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQT 256
           +         G     G       Y+ +K  +++YT+ LA +   + I  N   P    T
Sbjct: 159 IAAAQPPGAGGPQGPGG-----AGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNT 213

Query: 257 SMTQGQGSHTA----DEAADVGARLLLLHPQQLP 286
            M      +       EA      LL     Q  
Sbjct: 214 DMLNSAPMYRQFRPDLEAPSRADALLAFPAMQAM 247

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 Length = 328

 Score =  102 bits (256), Expect = 2e-25
 Identities = 40/268 (14%), Positives = 72/268 (26%), Gaps = 81/268 (30%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILT-ARDVERGQRAVESL-SEKGLPVNFFQLDVS 89
           +A+VTGA K +G ++ + L   G  V L   R          +L + +       Q D+S
Sbjct: 48  VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLS 107

Query: 90  DPSSIEAFVSWFKSN-----------------FAALDILVNNAGV--------------- 117
           + ++     +   +                  +   D+LVNNA                 
Sbjct: 108 NVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHE 167

Query: 118 SFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKS-----RILNISSRLGTLS 172
                 +        +  +N      L ++       +P+K       I+N+   +    
Sbjct: 168 PCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQ- 226

Query: 173 KVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYT 232
                                     L   ++                Y ++K AL   T
Sbjct: 227 -------------------------PLLGYTI----------------YTMAKGALEGLT 245

Query: 233 MVLAKRYEGEGISVNSYCPGFTQTSMTQ 260
              A       I VN   PG +      
Sbjct: 246 RSAALELAPLQIRVNGVGPGLSVLVDDM 273

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... Length = 327

 Score =  102 bits (255), Expect = 3e-25
 Identities = 53/255 (20%), Positives = 82/255 (32%), Gaps = 59/255 (23%)

Query: 28  SKETIAIVTGANKGIGFALVKRLAEL---GLTVILTARDVERGQRAVESLSEKGLPVNFF 84
           ++  + ++TG + GIG  L  RLA        V  T RD++   R  E+      P    
Sbjct: 1   ARTVV-LITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSL 59

Query: 85  ---QLDVSDPSSIEAFVSWFKSNFAALDILVNNAGV----SFNDIYKNTVEHAETVIRTN 137
              QLDV D  S+ A           +D+LV NAG+        +     +   +V+  N
Sbjct: 60  ETLQLDVRDSKSVAAARERVTEG--RVDVLVCNAGLGLLGPLEAL---GEDAVASVLDVN 114

Query: 138 FYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFV 197
             G   + ++ LP  +R  S  R+L   S  G                           +
Sbjct: 115 VVGTVRMLQAFLPDMKRRGS-GRVLVTGSVGG--------------------------LM 147

Query: 198 GLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTS 257
           GL    V                Y  SK AL      LA      G+ ++    G   T+
Sbjct: 148 GLPFNDV----------------YCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTA 191

Query: 258 MTQGQGSHTADEAAD 272
             +       +    
Sbjct: 192 FMEKVLGSPEEVLDR 206

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* Length = 291

 Score =  101 bits (253), Expect = 3e-25
 Identities = 43/290 (14%), Positives = 75/290 (25%), Gaps = 90/290 (31%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILT-ARDVERGQRAVESL-SEKGLPVNFFQLDVS 89
           +A+VTGA K +G ++ + L   G  V L   R          +L + +       Q D+S
Sbjct: 11  VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLS 70

Query: 90  DPSSIEAFVSWFKSN-----------------FAALDILVNNAGV--------------- 117
           + ++     +   +                  +   D+LVNNA                 
Sbjct: 71  NVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHE 130

Query: 118 SFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKS-----RILNISSRLGTLS 172
                 +        +  +N      L ++       +P+K       I+N+   +    
Sbjct: 131 PCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQ- 189

Query: 173 KVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYT 232
                                     L   ++                Y ++K AL   T
Sbjct: 190 -------------------------PLLGYTI----------------YTMAKGALEGLT 208

Query: 233 MVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTADEAADVGARLLLLHP 282
              A       I VN   PG +             D    V        P
Sbjct: 209 RSAALELAPLQIRVNGVGPGLSVL---------VDDMPPAVWEGHRSKVP 249

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 Length = 249

 Score =   99 bits (250), Expect = 3e-25
 Identities = 45/231 (19%), Positives = 77/231 (33%), Gaps = 59/231 (25%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
             +V  A++GIG A+   L++ G  V + AR+ E  +R+                D+   
Sbjct: 21  GVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHRY---------VVCDLRKD 71

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGV-SFNDIYKNTVEHAETVIRTNFYGAKLLTESLLP 150
                 +         +DILV NAG        + T E  +  I + F     +  + LP
Sbjct: 72  ------LDLLFEKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLP 125

Query: 151 LFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWK 210
             +      RI+ I+S       V +P                     L+          
Sbjct: 126 AMKEKGW-GRIVAITS-----FSVISPI------------------ENLYT--------- 152

Query: 211 SQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG 261
                        +++AL  +   L+      GI+VN   PG+T+T   + 
Sbjct: 153 ----------SNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKE 193

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} Length = 294

 Score = 99.6 bits (249), Expect = 1e-24
 Identities = 57/251 (22%), Positives = 89/251 (35%), Gaps = 56/251 (22%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILT-----ARDVERGQRAVESLSEKGLPVNFFQL 86
            A+VTG + GIG A     A  G  V +        D ++ +  +E    K + +     
Sbjct: 51  KALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLL---PG 107

Query: 87  DVSDPSSIEAFVSWFKSNFAALDILVNNAGV--SFNDIYKNTVEHAETVIRTNFYGAKLL 144
           D+SD S   + V   +     LDIL   AG   +  +I   T E  +     N +    +
Sbjct: 108 DLSDESFARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWI 167

Query: 145 TESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSV 204
           T+  +PL  +    + I+  SS          P+   +                      
Sbjct: 168 TQEAIPLLPKG---ASIITTSSIQA-----YQPSPHLL---------------------- 197

Query: 205 KDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGS 264
                          DYA +K A+  Y+  LAK+   +GI VN   PG   T++ Q  G 
Sbjct: 198 ---------------DYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTAL-QISGG 241

Query: 265 HTADEAADVGA 275
            T D+    G 
Sbjct: 242 QTQDKIPQFGQ 252

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} Length = 317

 Score = 99.3 bits (248), Expect = 2e-24
 Identities = 54/245 (22%), Positives = 88/245 (35%), Gaps = 55/245 (22%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILT------------ARDVERGQRAVESLSEKGL 79
           +A +TGA +G G     RLA+ G  ++                  E  +  V  + E+G 
Sbjct: 48  VAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGR 107

Query: 80  PVNFFQLDVSDPSSIEAFVSWFKSNFAALDILVNNAGV-SFNDIYKNTVEHAETVIRTNF 138
            +   Q DV D +S++A V    + F  +DILV+N G+ +  ++   T +    +++TN 
Sbjct: 108 RIIARQADVRDLASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNL 167

Query: 139 YGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVG 198
            GA     ++LP          ++ +SS +G                            G
Sbjct: 168 IGAWHACRAVLPSMIERGQGGSVIFVSSTVG--------------------------LRG 201

Query: 199 LFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSM 258
              Q                + YA SK  +    + LA       I VNS  PG   T M
Sbjct: 202 APGQ----------------SHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEM 245

Query: 259 TQGQG 263
              + 
Sbjct: 246 ALNEK 250

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A Length = 454

 Score = 99.7 bits (249), Expect = 7e-24
 Identities = 56/245 (22%), Positives = 88/245 (35%), Gaps = 78/245 (31%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARD--VERGQRAVESLSEKGLPVNFFQLDVS 89
           +A+VTGA +GIG  + +  A  G TV+    D   E  +R  + +    L      LDV+
Sbjct: 215 VAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKVGGTAL-----TLDVT 269

Query: 90  DPSSIEAFVSWFKSNF-AALDILVNNAGV------------SFNDIYKNTVEHAETVIRT 136
              +++   +    +    +DILVNNAG+             ++            VI  
Sbjct: 270 ADDAVDKITAHVTEHHGGKVDILVNNAGITRDKLLANMDEKRWDA-----------VIAV 318

Query: 137 NFYGAKLLTESLLP--LFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIE 194
           N    + LTE L+            R++ +SS  G      N                  
Sbjct: 319 NLLAPQRLTEGLVGNGTIGEGG---RVIGLSSMAGIAG---NR----------------- 355

Query: 195 RFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFT 254
              G   Q                T+YA +K  +      LA     +GI++N+  PGF 
Sbjct: 356 ---G---Q----------------TNYATTKAGMIGLAEALAPVLADKGITINAVAPGFI 393

Query: 255 QTSMT 259
           +T MT
Sbjct: 394 ETKMT 398

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} Length = 299

 Score = 97.3 bits (243), Expect = 9e-24
 Identities = 45/246 (18%), Positives = 73/246 (29%), Gaps = 56/246 (22%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILT------------ARDVERGQRAVESLSEKGL 79
           +A +TGA +G G +    LA  G  +I                  +     V  +   G 
Sbjct: 30  VAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGR 89

Query: 80  PVNFFQLDVSDPSSIEAFVSWFKSNFAALDILVNNAGVS--FNDIYKNTVEHAETVIRTN 137
            +   Q+DV D  +++A V    +    LDI++ NA ++     + +   +    +I  N
Sbjct: 90  RIIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVN 149

Query: 138 FYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFV 197
             GA +     +P          I+  SS  G                            
Sbjct: 150 LNGAWITARVAIPHIMAGKRGGSIVFTSSIGG--------------------------LR 183

Query: 198 GLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTS 257
           G                     +Y  SK  L+     +A       I VN  CP    T 
Sbjct: 184 GAENI----------------GNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATP 227

Query: 258 MTQGQG 263
           M   + 
Sbjct: 228 MLLNEP 233

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} PDB: 3uwr_A* Length = 286

 Score = 96.9 bits (242), Expect = 1e-23
 Identities = 46/258 (17%), Positives = 74/258 (28%), Gaps = 60/258 (23%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILT----------------ARDVERGQRAVESLS 75
           +A VTGA +G G +   RLA+ G  +I                  A   E      + + 
Sbjct: 13  VAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVK 72

Query: 76  EKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDILVNNAGVS--FNDIYKNTVEHAETV 133
                +   ++DV D  +++A V         LDI+V NAG+    + + K + E    +
Sbjct: 73  GHNRRIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEM 132

Query: 134 IRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQI 193
           I  N  G     ++ +P          I+  SS  G                        
Sbjct: 133 IDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGG------------------------ 168

Query: 194 ERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGF 253
                                      Y  +K  +               I VNS  P  
Sbjct: 169 --LKAYPHTGH----------------YVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTH 210

Query: 254 TQTSMTQGQGSHTADEAA 271
            +T M   +G+       
Sbjct: 211 VKTPMLHNEGTFKMFRPD 228

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* Length = 241

 Score = 95.5 bits (238), Expect = 2e-23
 Identities = 30/246 (12%), Positives = 63/246 (25%), Gaps = 62/246 (25%)

Query: 33  AIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPS 92
            +V G    +G   V+        V     DV   + A        + V           
Sbjct: 10  VLVYGGRGALGSRCVQAFRARNWWVASI--DVVENEEA-----SASVIVKMTDSFTEQAD 62

Query: 93  SIEAFVSWFKSNFAALDILVNNAGV--SFNDIYKNTVEHAETVIRTNFYGAKLLTESLLP 150
            + A V         +D ++  AG     N   K+  ++ + + + + + + + +     
Sbjct: 63  QVTAEVG-KLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATK 121

Query: 151 LFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWK 210
             +       +    ++                                           
Sbjct: 122 HLKEG---GLLTLAGAKAAL---------------------------------------- 138

Query: 211 SQGWPEIWTDYAVSKLALNAYTMVLAKRYEG--EGISVNSYCPGFTQTSMTQGQGSHTAD 268
             G P     Y ++K A++     LA +  G   G +  +  P    T M +      + 
Sbjct: 139 -DGTPG-MIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNR-----KSM 191

Query: 269 EAADVG 274
             AD  
Sbjct: 192 PEADFS 197

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 236

 Score = 94.3 bits (235), Expect = 3e-23
 Identities = 30/231 (12%), Positives = 70/231 (30%), Gaps = 57/231 (24%)

Query: 33  AIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPS 92
            IV G    +G A+++   + G TV+    D+    +A  ++   G        + ++  
Sbjct: 6   VIVYGGKGALGSAILEFFKKNGYTVLNI--DLSANDQADSNILVDG------NKNWTEQE 57

Query: 93  SIEAFVSWFKSNFAALDILVNNAGV--SFNDIYKNTVEHAETVIRTNFYGAKLLTESLLP 150
                 +      + +D +   AG     +   K+ V++A+ +I+ + + + +  +    
Sbjct: 58  QSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATT 117

Query: 151 LFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWK 210
             +       +    +                                            
Sbjct: 118 HLKPG---GLLQLTGAAAAM---------------------------------------- 134

Query: 211 SQGWPEIWTDYAVSKLALNAYTMVLAKRYEG--EGISVNSYCPGFTQTSMT 259
               P     Y ++K A++  T  LA +  G  +  +V +  P    T M 
Sbjct: 135 -GPTPS-MIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMN 183

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} Length = 257

 Score = 92.7 bits (231), Expect = 2e-22
 Identities = 48/245 (19%), Positives = 87/245 (35%), Gaps = 61/245 (24%)

Query: 29  KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDV 88
           ++ +A+VTG   G+G A  KRL + G  V++   D+ RG+  V  L ++     F   DV
Sbjct: 8   RDAVAVVTGGASGLGLATTKRLLDAGAQVVVL--DI-RGEDVVADLGDRAR---FAAADV 61

Query: 89  SDPSSIEAFVSWFKSNFAALDILVNNAGVS-----FNDIYKNTVEHAETVIRTN----FY 139
           +D +++ + +         L I+VN AG        +     ++     ++  N    F 
Sbjct: 62  TDEAAVASALDL-AETMGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFN 120

Query: 140 GAKLLTESLL---PLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERF 196
             +L  E +    P+   +  +  I+N +S                          +  F
Sbjct: 121 VLRLAAERIAKTEPVGPNAEERGVIINTAS--------------------------VAAF 154

Query: 197 VGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQT 256
            G   Q                  Y+ SK  +   T+ +A+      I V +  PG   T
Sbjct: 155 DGQIGQ----------------AAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDT 198

Query: 257 SMTQG 261
            +   
Sbjct: 199 PLLAS 203

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* Length = 291

 Score = 92.2 bits (230), Expect = 6e-22
 Identities = 51/250 (20%), Positives = 88/250 (35%), Gaps = 56/250 (22%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILT----ARDVERGQRAVESLSEKGLPVNFFQLD 87
             ++TG + GIG A+    A+ G  + +       D    ++ VE    K + +     D
Sbjct: 49  NVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLL---PGD 105

Query: 88  VSDPSSIEAFVSWFKSNFAALDILVNNAGVSF--NDIYKNTVEHAETVIRTNFYGAKLLT 145
           +SD    +  V        +L+ILVNN    +    +   T E  E   R N +    +T
Sbjct: 106 LSDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVT 165

Query: 146 ESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVK 205
           ++ L   ++      I+N +S +         N           E  I            
Sbjct: 166 KAALSHLKQG---DVIINTASIVAY-----EGN-----------ETLI------------ 194

Query: 206 DGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSH 265
                         DY+ +K A+ A+T  L++    +GI VN   PG   T +     S 
Sbjct: 195 --------------DYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLI--PSSF 238

Query: 266 TADEAADVGA 275
              + +  G+
Sbjct: 239 DEKKVSQFGS 248

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} Length = 281

 Score = 90.7 bits (226), Expect = 2e-21
 Identities = 54/250 (21%), Positives = 89/250 (35%), Gaps = 66/250 (26%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVIL---------------TARDVERGQRAVESLSE 76
            A++TG  +G+G +    LAE G  + +               TA D+      VE    
Sbjct: 12  TALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGR 71

Query: 77  KGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDILVNNAGV-SFNDIYKNTVEHAETVIR 135
           + +     ++DV D +++E+FV+  +     +DI + NAG+ +   + +      + VI 
Sbjct: 72  RCISA---KVDVKDRAALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIG 128

Query: 136 TNFYGAKLLTESLLP--LFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQI 193
           TN  G      ++ P  + R      RI+ +SS LG  +   N                 
Sbjct: 129 TNLTGTFNTIAAVAPGMIKRNY---GRIVTVSSMLGHSA---NFAQ-------------- 168

Query: 194 ERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGF 253
                                      Y  SK  +   T   A    G GI+VN+  PG 
Sbjct: 169 -------------------------ASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGN 203

Query: 254 TQTSMTQGQG 263
            +T MT    
Sbjct: 204 IETPMTHNDF 213

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 242

 Score = 85.7 bits (213), Expect = 6e-20
 Identities = 50/242 (20%), Positives = 76/242 (31%), Gaps = 65/242 (26%)

Query: 30  ETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVS 89
           E  A+VTG   G+G A    L   G  V             V  L  +G  + + + DV+
Sbjct: 2   ERSALVTGGASGLGRAAALALKARGYRV------------VVLDLRREGEDLIYVEGDVT 49

Query: 90  DPSSIEAFVSWFKSNFAALDILVNNAGVS-----FNDIYKNTVEHAETVIRTNFYGAKLL 144
               +   V+  +   A L  +V+ AGV            + +E    V+  N  G   +
Sbjct: 50  REEDVRRAVARAQE-EAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNV 108

Query: 145 T-ESLLPLFRRSPSKS----RILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGL 199
              +   +    P        I+N +S                          +  F G 
Sbjct: 109 LRLAAWAMRENPPDAEGQRGVIVNTAS--------------------------VAAFEGQ 142

Query: 200 FLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMT 259
             Q                  YA SK  + A T+  A+   G GI V +  PG   T + 
Sbjct: 143 IGQ----------------AAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLL 186

Query: 260 QG 261
           QG
Sbjct: 187 QG 188

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} Length = 322

 Score = 72.8 bits (179), Expect = 7e-15
 Identities = 52/249 (20%), Positives = 77/249 (30%), Gaps = 65/249 (26%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVI----------LTARDVERGQRAVESLSEKGLPV 81
           + IVTGA  GIG A     A  G  V+            A      Q  V+ ++  G   
Sbjct: 29  VVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEA 88

Query: 82  NFFQLDVSDPSSIEAFVSWFKSNFAALDILVNNAGV----SFNDIYKNTVEHAETVIRTN 137
                +V+D       +      F  LD+LVNNAG+            + E  + VI  +
Sbjct: 89  VADGSNVADWDQAAGLIQTAVETFGGLDVLVNNAGIVRDRMI---ANTSEEEFDAVIAVH 145

Query: 138 FYGAKLLTESLLPLFRRSPSKS-----RILNISSRLGTLSKVRNPNIKSILEDEELSEEQ 192
             G           +R           RI+N SS  G                       
Sbjct: 146 LKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQ--------------------- 184

Query: 193 IERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPG 252
                G   Q                 +Y+ +K  +   T+V A      G++VN+  P 
Sbjct: 185 -----GSVGQ----------------GNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS 223

Query: 253 FTQTSMTQG 261
             +T MT+ 
Sbjct: 224 -ARTRMTET 231

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score = 70.1 bits (172), Expect = 1e-13
 Identities = 54/242 (22%), Positives = 90/242 (37%), Gaps = 61/242 (25%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVIL---------TARDVERGQRAVESLSEKGLPVN 82
           + I+TGA  G+G       A+LG  V++            + +     V+ + + G    
Sbjct: 10  VVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVAV 69

Query: 83  FFQLDVSDPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKN-TVEHAETVIRTNFYGA 141
               +V D    +  V     NF  + +++NNAG+  +   K  T +  + VI  +  GA
Sbjct: 70  ADYNNVLDG---DKIVETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGA 126

Query: 142 KLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFL 201
             +T++  P F++     RI+N SS  G                            G F 
Sbjct: 127 FAVTKAAWPYFQKQ-KYGRIVNTSSPAGLY--------------------------GNFG 159

Query: 202 QSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGE--GISVNSYCPGFTQTSMT 259
           Q+                +YA +K AL  +   LAK  EG    I  N+  P   ++ MT
Sbjct: 160 QA----------------NYASAKSALLGFAETLAK--EGAKYNIKANAIAP-LARSRMT 200

Query: 260 QG 261
           + 
Sbjct: 201 ES 202

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score = 64.3 bits (157), Expect = 9e-12
 Identities = 51/232 (21%), Positives = 85/232 (36%), Gaps = 49/232 (21%)

Query: 31  TIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSD 90
            + ++TGA  G+G    K  A+ G  V++   D +   + V+ +   G      Q DV+ 
Sbjct: 323 KVVLITGAGAGLGKEYAKWFAKYGAKVVVN--DFKDATKTVDEIKAAGGEAWPDQHDVAK 380

Query: 91  PSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKN-TVEHAETVIRTNFYGAKLLTESLL 149
            S  EA +      +  +DILVNNAG+  +  +   + +  ++V + +  G   L+    
Sbjct: 381 DS--EAIIKNVIDKYGTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAW 438

Query: 150 PLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTW 209
           P F       RI+NI+S  G                            G F Q+      
Sbjct: 439 PYFVEK-QFGRIINITSTSGIY--------------------------GNFGQAN----- 466

Query: 210 KSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG 261
                      Y+ SK  +   +  +A       I VN   P   +T+MT  
Sbjct: 467 -----------YSSSKAGILGLSKTMAIEGAKNNIKVNIVAP-HAETAMTLS 506

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* Length = 319

 Score = 67.8 bits (166), Expect = 3e-13
 Identities = 46/245 (18%), Positives = 83/245 (33%), Gaps = 67/245 (27%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVIL---------TARDVERGQRAVESLSEKG---L 79
           + +VTGA  G+G A     AE G  V++           +      + VE +  +G   +
Sbjct: 11  VVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAV 70

Query: 80  PVNFFQLDVSDPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKN-TVEHAETVIRTNF 138
                  +     + E  V      F  +D++VNNAG+  +  +   + E  + + R + 
Sbjct: 71  A------NYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHL 124

Query: 139 YGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVG 198
            G+  +T +     ++  +  RI+  +S  G                            G
Sbjct: 125 RGSFQVTRAAWDHMKKQ-NYGRIIMTASASGIY--------------------------G 157

Query: 199 LFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGE--GISVNSYCPGFTQT 256
            F Q+                +Y+ +KL L      L    EG    I  N+  P    +
Sbjct: 158 NFGQA----------------NYSAAKLGLLGLANTLVI--EGRKNNIHCNTIAPNAG-S 198

Query: 257 SMTQG 261
            MT+ 
Sbjct: 199 RMTET 203

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* Length = 287

 Score = 66.8 bits (163), Expect = 6e-13
 Identities = 17/101 (16%), Positives = 39/101 (38%), Gaps = 8/101 (7%)

Query: 33  AIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPS 92
           A+V      +G      LA  G  V+L  R +++ Q A +S++++   VN    + +D +
Sbjct: 122 AVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRF-KVNVTAAETADDA 180

Query: 93  SIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETV 133
           S    V            +     +    + +   ++  ++
Sbjct: 181 SRAEAV-------KGAHFVFTAGAIGLELLPQAAWQNESSI 214

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} Length = 613

 Score = 66.0 bits (161), Expect = 3e-12
 Identities = 46/243 (18%), Positives = 74/243 (30%), Gaps = 63/243 (25%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVIL---------TARDVERGQRAVESLSEKGLPVN 82
           +A+VTGA  G+G       AE G  V++                    V+ + + G    
Sbjct: 21  VAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEAV 80

Query: 83  FFQLDVSDPSSIEAFVSWFKSNFAALDILVNNAGV----SFNDIYKNTVEHAETVIRTNF 138
                V D       +      F  +DILVNNAG+    S       + +    V   + 
Sbjct: 81  ADYNSVIDG---AKVIETAIKAFGRVDILVNNAGILRDRSLVKT---SEQDWNLVNDVHL 134

Query: 139 YGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVG 198
            G+   T++  P  ++  +  RI+  SS  G                            G
Sbjct: 135 KGSFKCTQAAFPYMKKQ-NYGRIIMTSSNSG--------------------------IYG 167

Query: 199 LFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSM 258
            F Q                 +Y  +K+ L      +A       +  N   P    + M
Sbjct: 168 NFGQV----------------NYTAAKMGLIGLANTVAIEGARNNVLCNVIVP-TAASRM 210

Query: 259 TQG 261
           T+G
Sbjct: 211 TEG 213

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227

 Score = 48.9 bits (117), Expect = 5e-07
 Identities = 22/110 (20%), Positives = 39/110 (35%), Gaps = 17/110 (15%)

Query: 28  SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLD 87
             + I  + GA+  +G AL+      G  V    R  E+ +   E L          + D
Sbjct: 3   KVKKIV-LIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIENEHLK-------VKKAD 54

Query: 88  VSDPSSIEAFVSWFKSNFAALDILVNNAGVSFND--IYKNTVEHAETVIR 135
           VS    +              D +++     +N+  IY  T++   T+I 
Sbjct: 55  VSSLDEVCEVC-------KGADAVISAFNPGWNNPDIYDETIKVYLTIID 97

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342

 Score = 47.3 bits (113), Expect = 2e-06
 Identities = 18/115 (15%), Positives = 35/115 (30%), Gaps = 22/115 (19%)

Query: 35  VTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSI 94
           V GA   +G    + +   G  ++L  R   + QR         L       ++ D + +
Sbjct: 18  VLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRL------AYLEPECRVAEMLDHAGL 71

Query: 95  EAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLL 149
           E            LD ++ +AG      Y +     +  + +        T    
Sbjct: 72  ERA-------LRGLDGVIFSAGY-----YPSRPRRWQEEVASALGQ----TNPFY 110

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* Length = 261

 Score = 44.9 bits (107), Expect = 1e-05
 Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 3/82 (3%)

Query: 33  AIVTG-ANK-GIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSD 90
           A+V G  N+  +GFA+  +L E G  V L+ +  ER +   E L+E       F+ DV+ 
Sbjct: 11  ALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQA-ERLRPEAEKLAEALGGALLFRADVTQ 69

Query: 91  PSSIEAFVSWFKSNFAALDILV 112
              ++A  +  K  F  LD LV
Sbjct: 70  DEELDALFAGVKEAFGGLDYLV 91

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* Length = 275

 Score = 44.1 bits (105), Expect = 2e-05
 Identities = 17/82 (20%), Positives = 38/82 (46%), Gaps = 3/82 (3%)

Query: 33  AIVTG-ANK-GIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSD 90
            ++ G AN   I + + +     G T+  T  + E  ++ V  ++++      ++LDVS 
Sbjct: 9   GLIVGVANNKSIAYGIAQSCFNQGATLAFTYLN-ESLEKRVRPIAQELNSPYVYELDVSK 67

Query: 91  PSSIEAFVSWFKSNFAALDILV 112
               ++  +  K +  +LD +V
Sbjct: 68  EEHFKSLYNSVKKDLGSLDFIV 89

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* Length = 265

 Score = 44.1 bits (105), Expect = 2e-05
 Identities = 17/82 (20%), Positives = 37/82 (45%), Gaps = 3/82 (3%)

Query: 33  AIVTG-ANK-GIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSD 90
            +VTG A+K  I + + + +   G  +  T ++ ++ +  VE  + +       Q DV++
Sbjct: 12  ILVTGVASKLSIAYGIAQAMHREGAELAFTYQN-DKLKGRVEEFAAQLGSDIVLQCDVAE 70

Query: 91  PSSIEAFVSWFKSNFAALDILV 112
            +SI+   +     +   D  V
Sbjct: 71  DASIDTMFAELGKVWPKFDGFV 92

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} Length = 271

 Score = 43.3 bits (103), Expect = 4e-05
 Identities = 18/82 (21%), Positives = 37/82 (45%), Gaps = 3/82 (3%)

Query: 33  AIVTG-ANK-GIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSD 90
            ++TG  +   I + + K     G  +  T    +R +  +   + +      F  DV+D
Sbjct: 17  ILLTGLLSNRSIAYGIAKACKREGAELAFTYVG-DRFKDRITEFAAEFGSELVFPCDVAD 75

Query: 91  PSSIEAFVSWFKSNFAALDILV 112
            + I+A  +  K+++ +LD LV
Sbjct: 76  DAQIDALFASLKTHWDSLDGLV 97

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} Length = 1688

 Score = 44.1 bits (104), Expect = 4e-05
 Identities = 18/80 (22%), Positives = 33/80 (41%), Gaps = 16/80 (20%)

Query: 32  IAIVTGANKG-IGFALVKRLAELGLTVILTAR--DVERGQRAVESLSEKG--------LP 80
             ++TGA KG IG  +++ L + G  V++T      +         ++ G        +P
Sbjct: 478 YVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVP 537

Query: 81  VNFFQLDVSDPSSIEAFVSW 100
            N  Q    D   +EA + +
Sbjct: 538 FN--QGSKQD---VEALIEF 552

>4alk_A ENR, enoyl-[acyl-carrier-protein] reductase [NADPH]; oxidoreductase, short-chain dehydrogenase/reductase superfam fatty acid biosynthesis; HET: NAP E9P GLU; 1.90A {Staphylococcus aureus} PDB: 4alj_A* 4ali_A* 4alm_A 4aln_A 3gr6_A* 3gns_A* 3gnt_A 4all_A* Length = 282

 Score = 43.0 bits (102), Expect = 5e-05
 Identities = 21/84 (25%), Positives = 38/84 (45%), Gaps = 5/84 (5%)

Query: 33  AIVTG-ANK-GIGFALVKRLAELGLTVILTARDVERGQRAVESLSEK--GLPVNFFQLDV 88
            ++ G ANK  I F + K L +LG  ++ T R  ER ++ +E L E+      + +Q+DV
Sbjct: 35  YVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRK-ERSRKELEKLLEQLNQPEAHLYQIDV 93

Query: 89  SDPSSIEAFVSWFKSNFAALDILV 112
                +         +   +D + 
Sbjct: 94  QSDEEVINGFEQIGKDVGNIDGVY 117

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} Length = 285

 Score = 43.0 bits (102), Expect = 5e-05
 Identities = 19/82 (23%), Positives = 38/82 (46%), Gaps = 3/82 (3%)

Query: 33  AIVTG-ANK-GIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSD 90
           A++TG AN+  I + + K     G  +  T     + ++ V  +++        + DVS 
Sbjct: 24  ALITGVANERSIAYGIAKSFHREGAQLAFTYAT-PKLEKRVREIAKGFGSDLVVKCDVSL 82

Query: 91  PSSIEAFVSWFKSNFAALDILV 112
              I+    + + N+ +LDI+V
Sbjct: 83  DEDIKNLKKFLEENWGSLDIIV 104

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* Length = 293

 Score = 43.0 bits (102), Expect = 5e-05
 Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 3/82 (3%)

Query: 33  AIVTG-ANK-GIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSD 90
            ++ G AN   I + + K   E G  +  T +  +  ++ VE L+E+         DV+D
Sbjct: 34  GLILGVANNRSIAWGIAKAAREAGAELAFTYQG-DALKKRVEPLAEELGAFVAGHCDVAD 92

Query: 91  PSSIEAFVSWFKSNFAALDILV 112
            +SI+A     +  +  LD LV
Sbjct: 93  AASIDAVFETLEKKWGKLDFLV 114

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* Length = 296

 Score = 43.0 bits (102), Expect = 5e-05
 Identities = 20/82 (24%), Positives = 35/82 (42%), Gaps = 3/82 (3%)

Query: 33  AIVTG-ANK-GIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSD 90
            ++ G AN   + + + K +   G  V LT    E  ++ V+ L+E          DVSD
Sbjct: 33  GVIIGVANDKSLAWGIAKAVCAQGAEVALTYLS-ETFKKRVDPLAESLGVKLTVPCDVSD 91

Query: 91  PSSIEAFVSWFKSNFAALDILV 112
             S++         + +LD +V
Sbjct: 92  AESVDNMFKVLAEEWGSLDFVV 113

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 2jjy_A* Length = 280

 Score = 43.0 bits (102), Expect = 6e-05
 Identities = 17/82 (20%), Positives = 29/82 (35%), Gaps = 4/82 (4%)

Query: 33  AIVTG-ANK-GIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSD 90
            ++TG  +   I + + K +   G  +  T    +   R VE L  +  P      DV  
Sbjct: 29  ILITGLLSNKSIAYGIAKAMHREGAELAFTYVG-QFKDR-VEKLCAEFNPAAVLPCDVIS 86

Query: 91  PSSIEAFVSWFKSNFAALDILV 112
              I+         +  LD +V
Sbjct: 87  DQEIKDLFVELGKVWDGLDAIV 108

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* Length = 266

 Score = 42.9 bits (102), Expect = 6e-05
 Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 7/85 (8%)

Query: 33  AIVTG-ANK-GIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVN---FFQLD 87
            +V G ANK  I + + + L E G  +I T    ER +++V  L+   L  N       D
Sbjct: 10  IVVMGVANKRSIAWGIARSLHEAGARLIFTYAG-ERLEKSVHELAGT-LDRNDSIILPCD 67

Query: 88  VSDPSSIEAFVSWFKSNFAALDILV 112
           V++ + IE   +  K     +  + 
Sbjct: 68  VTNDAEIETCFASIKEQVGVIHGIA 92

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Length = 206

 Score = 42.3 bits (100), Expect = 7e-05
 Identities = 12/62 (19%), Positives = 22/62 (35%), Gaps = 6/62 (9%)

Query: 35 VTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSI 94
          + GA    G   + +  + G  V +  RD  R    + S   +   V     DV   + +
Sbjct: 8  IFGATGQTGLTTLAQAVQAGYEVTVLVRDSSR----LPSEGPRPAHV--VVGDVLQAADV 61

Query: 95 EA 96
          + 
Sbjct: 62 DK 63

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A Length = 315

 Score = 41.1 bits (97), Expect = 2e-04
 Identities = 13/81 (16%), Positives = 29/81 (35%), Gaps = 19/81 (23%)

Query: 35  VTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSI 94
           VTGA   +G A+ K   +     +       R +                Q+++ D +++
Sbjct: 7   VTGATGLLGRAVHKEFQQNNWHAVGCGFRRARPKFE--------------QVNLLDSNAV 52

Query: 95  EAFVSWFKSNFAALDILVNNA 115
              +  F+       ++V+ A
Sbjct: 53  HHIIHDFQP-----HVIVHCA 68

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... Length = 269

 Score = 40.7 bits (96), Expect = 3e-04
 Identities = 17/86 (19%), Positives = 34/86 (39%), Gaps = 9/86 (10%)

Query: 33  AIVTG-ANKG-IGFALVKRLAELGLTVILTARDVERGQRAVESLSEK-GLPVNFFQLDVS 89
            +V+G      I F + +   E G  ++LT  D  R    ++ ++++        +LDV 
Sbjct: 10  ILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLR---LIQRITDRLPAKAPLLELDVQ 66

Query: 90  DPSSIEAFVSWFKSNFAA---LDILV 112
           +   + +          A   LD +V
Sbjct: 67  NEEHLASLAGRVTEAIGAGNKLDGVV 92

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} Length = 236

 Score = 40.2 bits (94), Expect = 4e-04
 Identities = 15/103 (14%), Positives = 34/103 (33%), Gaps = 16/103 (15%)

Query: 31  TIAIVTGANKGIGFALVKRLAE-LGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVS 89
            +  + GA   I   ++ +LA+   +   L AR   +    +         +     DV 
Sbjct: 25  NVL-ILGAGGQIARHVINQLADKQTIKQTLFARQPAK----IHKPYPTNSQI--IMGDVL 77

Query: 90  DPSSIEAFVSWFKSNFAALDILVNNAGVSFNDI-YKNTVEHAE 131
           + ++++             DI+  N      DI   + +   +
Sbjct: 78  NHAALKQA-------MQGQDIVYANLTGEDLDIQANSVIAAMK 113

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.0 bits (95), Expect = 5e-04
 Identities = 27/180 (15%), Positives = 53/180 (29%), Gaps = 64/180 (35%)

Query: 87  DVSDPSSIEAFVSWFKSNFAALDILV--NNAGVSFNDIYKNTVEHAETVIRTNFYGAKLL 144
           +V +  +  AF      N +   IL+      V  + +   T  H    I  + +   L 
Sbjct: 252 NVQNAKAWNAF------NLSC-KILLTTRFKQV-TDFLSAATTTH----ISLDHHSMTLT 299

Query: 145 TESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIE---RFVGLFL 201
            + +  L        + L+                      ++L  E +    R + +  
Sbjct: 300 PDEVKSLL------LKYLDCRP-------------------QDLPREVLTTNPRRLSIIA 334

Query: 202 QSVKDG--TWKSQGWPEIWTDYAVSKL---------ALNAYTMVLAKRYEGEGI---SVN 247
           +S++DG  TW +      W      KL          L        K ++   +   S +
Sbjct: 335 ESIRDGLATWDN------WKHVNCDKLTTIIESSLNVLEPAEY--RKMFDRLSVFPPSAH 386

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} Length = 221

 Score = 39.6 bits (92), Expect = 5e-04
 Identities = 16/101 (15%), Positives = 37/101 (36%), Gaps = 17/101 (16%)

Query: 35  VTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSI 94
           + GA    G  +++     G  V    R+  +  +  +        +N  Q D+ D +  
Sbjct: 5   IIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTHKD-------INILQKDIFDLTLS 57

Query: 95  EAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIR 135
           +          +  +++V+  G+S  D  +  V   + +I 
Sbjct: 58  DL---------SDQNVVVDAYGIS-PDEAEKHVTSLDHLIS 88

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* Length = 364

 Score = 40.1 bits (93), Expect = 5e-04
 Identities = 19/70 (27%), Positives = 30/70 (42%), Gaps = 12/70 (17%)

Query: 32 IAIVTGANKGIGFALVKRLAELGL-----TVILTARDVERGQRAVESLSEKGLPVNFFQL 86
          +A++ G    IG +L + L           V   AR   R + A    +    P+N+ Q 
Sbjct: 3  VALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVAR---RTRPAWHEDN----PINYVQC 55

Query: 87 DVSDPSSIEA 96
          D+SDP   +A
Sbjct: 56 DISDPDDSQA 65

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D Length = 287

 Score = 39.6 bits (93), Expect = 6e-04
 Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 9/68 (13%)

Query: 31 TIAIVTGANKGIGFALVKRLAEL--GLTVILTARDVERGQRAVESLSEKGLPVNFFQLDV 88
          +IA VTGA   +G  +++ L +      +I   R+VE+      +L+++G  V     D 
Sbjct: 2  SIA-VTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEK----ASTLADQG--VEVRHGDY 54

Query: 89 SDPSSIEA 96
          + P S++ 
Sbjct: 55 NQPESLQK 62

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	302
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	100.0
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	100.0
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	100.0
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	100.0
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	100.0
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	100.0
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	100.0
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	100.0
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	100.0
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	100.0
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	100.0
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	100.0
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	100.0
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	100.0
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	100.0
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	100.0
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	100.0
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	100.0
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	100.0
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	100.0
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	100.0
3imf_A	257	Short chain dehydrogenase; structural genomics, in	100.0
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	100.0
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	100.0
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	100.0
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	100.0
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	100.0
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	100.0
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	100.0
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	100.0
3rih_A	293	Short chain dehydrogenase or reductase; structural	100.0
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
4dqx_A	277	Probable oxidoreductase protein; structural genomi	100.0
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	100.0
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	100.0
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	100.0
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	100.0
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	100.0
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	100.0
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	100.0
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	100.0
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	100.0
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	100.0
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	100.0
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	100.0
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	100.0
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	100.0
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	100.0
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	100.0
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	100.0
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	100.0
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	100.0
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	100.0
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	100.0
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	100.0
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	100.0
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	100.0
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	100.0
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	100.0
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	100.0
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	100.0
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	100.0
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	100.0
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	100.0
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	100.0
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	100.0
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	100.0
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	100.0
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	100.0
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	100.0
3cxt_A	291	Dehydrogenase with different specificities; rossma	100.0
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	100.0
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	100.0
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	100.0
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	100.0
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	100.0
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	100.0
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	100.0
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	100.0
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	100.0
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	100.0
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	100.0
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	100.0
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	100.0
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	100.0
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	100.0
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	100.0
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	100.0
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	100.0
1xhl_A	297	Short-chain dehydrogenase/reductase family member	100.0
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	100.0
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	100.0
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	100.0
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	100.0
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	100.0
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	100.0
1xkq_A	280	Short-chain reductase family member (5D234); parra	100.0
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	100.0
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	100.0
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	100.0
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	100.0
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	100.0
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	100.0
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	100.0
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	100.0
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	100.0
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	100.0
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	100.0
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	100.0
1spx_A	278	Short-chain reductase family member (5L265); paral	100.0
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	100.0
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	100.0
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	100.0
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	100.0
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	100.0
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	100.0
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	100.0
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	100.0
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	100.0
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	100.0
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	100.0
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	100.0
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	100.0
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	100.0
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	100.0
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	100.0
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	100.0
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	100.0
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	100.0
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	100.0
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	100.0
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	100.0
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	100.0
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	100.0
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	100.0
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	100.0
1xq1_A	266	Putative tropinone reducatse; structural genomics,	100.0
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	100.0
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	100.0
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	100.0
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	100.0
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	100.0
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	100.0
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	100.0
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	100.0
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	100.0
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	100.0
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	100.0
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	100.0
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	100.0
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	100.0
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	100.0
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	100.0
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	100.0
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	100.0
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	100.0
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	100.0
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	100.0
4e4y_A	244	Short chain dehydrogenase family protein; structur	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	100.0
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	100.0
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	100.0
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	100.0
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	100.0
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	100.0
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	100.0
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	100.0
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	100.0
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	100.0
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	100.0
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	100.0
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	100.0
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	100.0
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	100.0
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	100.0
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	100.0
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	100.0
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	100.0
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	100.0
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	100.0
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	100.0
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	100.0
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	100.0
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	100.0
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	100.0
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	100.0
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	100.0
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	100.0
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	100.0
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	100.0
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	100.0
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	100.0
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	99.98
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.97
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.97
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.96
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	99.96
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	99.96
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	99.96
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.96
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.95
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.94
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.94
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.93
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.93
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.93
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.92
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.91
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.89
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	99.88
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.88
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.88
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.88
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	99.88
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.87
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	99.87
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	99.87
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	99.87
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.87
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	99.87
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	99.87
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.86
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	99.86
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	99.86
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	99.86
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.86
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.86
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	99.86
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	99.85
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	99.85
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.85
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.85
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	99.84
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.84
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.84
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	99.84
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.84
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	99.84
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	99.84
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.83
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.83
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	99.83
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	99.83
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	99.83
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.83
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	99.83
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	99.82
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.82
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.82
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.82
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.82
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	99.82
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	99.82
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.82
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.81
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	99.81
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.81
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	99.81
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.81
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	99.8
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.8
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	99.8
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	99.8
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.79
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.79
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	99.79
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.79
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.78
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.78
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.77
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.76
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	99.76
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.75
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	99.74
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	99.73
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.73
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.73
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	99.73
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	99.71
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	99.7
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.7
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.69
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.68
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.66
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.65
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	99.64
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.6
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.6
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.6
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.56
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.52
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	99.51
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.49
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.49
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.42
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	99.3
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	99.29
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	99.1
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	98.9
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	98.81
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	98.74
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	98.65
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.62
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	98.58
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	98.5
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	98.5
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	98.48
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.48
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.48
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.47
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	98.45
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	98.39
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.32
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	98.23
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	98.22
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.21
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	98.2
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	98.2
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	98.18
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	98.15
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	98.14
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	98.13
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	98.12
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.12
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	98.12
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	98.11
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	98.06
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	98.01
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	97.99
1id1_A	153	Putative potassium channel protein; RCK domain, E.	97.98
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	97.94
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	97.92
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	97.92
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	97.89
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	97.88
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	97.88
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	97.87
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	97.84
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	97.82
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	97.81
3gms_A	340	Putative NADPH:quinone reductase; structural genom	97.75
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	97.74
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	97.72
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	97.71
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	97.69
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	97.68
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	97.66
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	97.64
4eye_A	342	Probable oxidoreductase; structural genomics, niai	97.61
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	97.6
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	97.57
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	97.56
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.52
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.51
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	97.51
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	97.5
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.5
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	97.47
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	97.46
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	97.4
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	97.4
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	97.38
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	97.35
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	97.34
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	97.28
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	97.25
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	97.24
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	97.22
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	97.17
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	97.17
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	97.16
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	97.16
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	97.15
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	97.13
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	97.11
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	97.11
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	97.09
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	97.08
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	97.01
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	96.98
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	96.92
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	96.88
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	96.88
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	96.87
1f0y_A	302	HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive	96.85
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	96.83
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	96.81
3tl2_A	315	Malate dehydrogenase; center for structural genomi	96.81
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	96.8
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	96.79
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	96.72
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	96.72
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	96.7
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	96.7
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	96.7
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	96.68
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	96.67
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	96.65
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	96.64
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	96.63
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	96.63
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	96.63
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	96.62
3rui_A	340	Ubiquitin-like modifier-activating enzyme ATG7; au	96.59
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	96.58
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	96.56
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	96.55
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	96.52
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	96.51
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	96.5
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	96.48
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	96.48
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	96.47
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	96.44
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	96.43
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	96.42
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	96.42
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	96.41
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	96.41
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	96.38
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	96.35
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	96.33
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	96.31
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	96.3
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	96.29
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	96.26
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	96.23
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	96.23
4gsl_A	615	Ubiquitin-like modifier-activating enzyme ATG7; ub	96.22
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	96.21
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	96.21
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	96.17
2x0j_A	294	Malate dehydrogenase; oxidoreductase, hyperthermop	96.16
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	96.14
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	96.12
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	96.08
2xxj_A	310	L-LDH, L-lactate dehydrogenase; oxidoreductase, hy	96.07
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	96.01
2d4a_B	308	Malate dehydrogenase; archaea, hyperthermophIle, o	96.0
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	96.0
4g65_A	461	TRK system potassium uptake protein TRKA; structur	95.97
3vh1_A	598	Ubiquitin-like modifier-activating enzyme ATG7; au	95.96
1ldn_A	316	L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA	95.96
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	95.94
1t2d_A	322	LDH-P, L-lactate dehydrogenase; ternary complex, o	95.92
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	95.9
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	95.88
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	95.88
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	95.85
1guz_A	310	Malate dehydrogenase; oxidoreductase, tricarboxyli	95.82
1a5z_A	319	L-lactate dehydrogenase; oxidoreductase, glycolysi	95.79
2hjr_A	328	Malate dehydrogenase; malaria, structural genomics	95.77
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	95.75
2ewd_A	317	Lactate dehydrogenase,; protein-substrate_cofactor	95.75
3d1l_A	266	Putative NADP oxidoreductase BF3122; structural ge	95.72
3h5n_A	353	MCCB protein; ubiquitin-activating enzyme, microci	95.71
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	95.61
3tri_A	280	Pyrroline-5-carboxylate reductase; amino acid bios	95.6
3orq_A	377	N5-carboxyaminoimidazole ribonucleotide synthetas;	95.57
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	95.56
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	95.54
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	95.5
1lnq_A	336	MTHK channels, potassium channel related protein;	95.5
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	95.45
2raf_A	209	Putative dinucleotide-binding oxidoreductase; NP_7	95.41
1hyh_A	309	L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2	95.4
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	95.4
3lk7_A	451	UDP-N-acetylmuramoylalanine--D-glutamate ligase; a	95.39
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	95.36
1lld_A	319	L-lactate dehydrogenase; oxidoreductase(CHOH (D)-N	95.36
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	95.35
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	95.35
2zyd_A	480	6-phosphogluconate dehydrogenase, decarboxylating;	95.32
3l07_A	285	Bifunctional protein fold; structural genomics, ID	95.32
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	95.28
2d5c_A	263	AROE, shikimate 5-dehydrogenase; substrate, dimer,	95.26
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	95.24
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	95.22
3qha_A	296	Putative oxidoreductase; seattle structural genomi	95.19
7mdh_A	375	Protein (malate dehydrogenase); chloroplastic mala	95.16
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	95.12

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=100.00  E-value=8e-49  Score=351.75  Aligned_cols=229  Identities=25%  Similarity=0.302  Sum_probs=212.0

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      .+++||++|||||++|||+++|+.|+++|++|++++|+.++++++.+++++.+.++.++.+|++|+++++++++++.++|
T Consensus         3 ~sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~   82 (254)
T 4fn4_A            3 QSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETY   82 (254)
T ss_dssp             GGGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            37999999999999999999999999999999999999999999999999989999999999999999999999999999


Q ss_pred             CCccEEEEcCCCCCC--CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCccccccc
Q 022103          106 AALDILVNNAGVSFN--DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSIL  183 (302)
Q Consensus       106 g~id~lv~~aG~~~~--~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~  183 (302)
                      |++|+||||||+...  ++.+.+.++|++++++|+.|+++++|+++|+|.++ +.|+||++||..+..+.+.        
T Consensus        83 G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~-~~G~IVnisS~~g~~~~~~--------  153 (254)
T 4fn4_A           83 SRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQ-GKGVIVNTASIAGIRGGFA--------  153 (254)
T ss_dssp             SCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTCSSSS--------
T ss_pred             CCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEEEEechhhcCCCCC--------
Confidence            999999999997643  68899999999999999999999999999999987 5799999999999866433        


Q ss_pred             chhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC-
Q 022103          184 EDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ-  262 (302)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~-  262 (302)
                                                        ..+|++||+|+.+|+|+||.|++++|||||+|+||+|+|+|.... 
T Consensus       154 ----------------------------------~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~  199 (254)
T 4fn4_A          154 ----------------------------------GAPYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSS  199 (254)
T ss_dssp             ----------------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCS
T ss_pred             ----------------------------------ChHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCccccccc
Confidence                                              378999999999999999999999999999999999999997543 


Q ss_pred             ------------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          263 ------------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       263 ------------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                                        +...|+|+|..+++|++ +...+++|+.+..||+..
T Consensus       200 ~~~~~~~~~~~~~~~~~~R~g~pediA~~v~fLaS-d~a~~iTG~~i~VDGG~t  252 (254)
T 4fn4_A          200 KPSELGMRTLTKLMSLSSRLAEPEDIANVIVFLAS-DEASFVNGDAVVVDGGLT  252 (254)
T ss_dssp             SCCHHHHHHHHHHHTTCCCCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGG
T ss_pred             CCcHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhC-chhcCCcCCEEEeCCCcc
Confidence                              12579999999999997 788999999999999864

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=100.00  E-value=8.8e-49  Score=351.66  Aligned_cols=231  Identities=25%  Similarity=0.305  Sum_probs=213.2

Q ss_pred             cccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhh
Q 022103           25 KWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSN  104 (302)
Q Consensus        25 ~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~  104 (302)
                      .++++||+++||||++|||+++|++|+++|++|++++|+.+++++.++++.+.+.++.++.+|++|+++++++++++.++
T Consensus         4 ~f~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (255)
T 4g81_D            4 LFDLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAE   83 (255)
T ss_dssp             TTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHT
T ss_pred             CcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Confidence            36899999999999999999999999999999999999999999999999998889999999999999999999999999


Q ss_pred             CCCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCccccccc
Q 022103          105 FAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSIL  183 (302)
Q Consensus       105 ~g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~  183 (302)
                      ||++|+||||||+... ++.+.+.++|++++++|+.|+++++|+++|+|.++.+.|+||++||..+..+.+.        
T Consensus        84 ~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~~~--------  155 (255)
T 4g81_D           84 GIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARPT--------  155 (255)
T ss_dssp             TCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBCTT--------
T ss_pred             CCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCCCC--------
Confidence            9999999999998755 6899999999999999999999999999999976546799999999998766433        


Q ss_pred             chhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC-
Q 022103          184 EDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ-  262 (302)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~-  262 (302)
                                                        ..+|++||+|+.+|+|+||.|++++|||||+|+||+|+|+|.... 
T Consensus       156 ----------------------------------~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~  201 (255)
T 4g81_D          156 ----------------------------------VAPYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALI  201 (255)
T ss_dssp             ----------------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHHH
T ss_pred             ----------------------------------chhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhccc
Confidence                                              478999999999999999999999999999999999999996532 


Q ss_pred             ----------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          263 ----------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       263 ----------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                                      +..+|+|+|..+++|++ +...+++|+.+..||++.
T Consensus       202 ~~~~~~~~~~~~~Pl~R~g~pediA~~v~fL~S-~~a~~iTG~~i~VDGG~~  252 (255)
T 4g81_D          202 EDKQFDSWVKSSTPSQRWGRPEELIGTAIFLSS-KASDYINGQIIYVDGGWL  252 (255)
T ss_dssp             TCHHHHHHHHHHSTTCSCBCGGGGHHHHHHHHS-GGGTTCCSCEEEESTTGG
T ss_pred             CCHHHHHHHHhCCCCCCCcCHHHHHHHHHHHhC-chhCCCcCCEEEECCCeE
Confidence                            23589999999999997 788999999999999864

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=100.00  E-value=3.7e-46  Score=335.42  Aligned_cols=228  Identities=24%  Similarity=0.268  Sum_probs=204.4

Q ss_pred             cccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhh
Q 022103           25 KWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSN  104 (302)
Q Consensus        25 ~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~  104 (302)
                      +++++||++|||||++|||+++|++|+++|++|++++|+.++.+ ..+++.+.+.++.++.+|++|+++++++++++.++
T Consensus         2 ~~~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~-~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~   80 (258)
T 4gkb_A            2 DLNLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGA-FLDALAQRQPRATYLPVELQDDAQCRDAVAQTIAT   80 (258)
T ss_dssp             CCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHH-HHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHH-HHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHH
Confidence            46899999999999999999999999999999999999987754 44566666778999999999999999999999999


Q ss_pred             CCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccc
Q 022103          105 FAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILE  184 (302)
Q Consensus       105 ~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~  184 (302)
                      ||++|+||||||+......+.+.++|++++++|+.++++++|+++|+|+++  .|+||++||..+..+.+.         
T Consensus        81 ~G~iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~--~G~IVnisS~~~~~~~~~---------  149 (258)
T 4gkb_A           81 FGRLDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKAT--RGAIVNISSKTAVTGQGN---------  149 (258)
T ss_dssp             HSCCCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEECCTHHHHCCSS---------
T ss_pred             hCCCCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc--CCeEEEEeehhhccCCCC---------
Confidence            999999999999876655688999999999999999999999999999765  599999999998766433         


Q ss_pred             hhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC--
Q 022103          185 DEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ--  262 (302)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~--  262 (302)
                                                       ..+|++||+|+.+|+|+||.|++++|||||+|+||+|+|+|.+..  
T Consensus       150 ---------------------------------~~~Y~asKaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~  196 (258)
T 4gkb_A          150 ---------------------------------TSGYCASKGAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNWIA  196 (258)
T ss_dssp             ---------------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC-----
T ss_pred             ---------------------------------chHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhhhh
Confidence                                             478999999999999999999999999999999999999997642  


Q ss_pred             --------------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          263 --------------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       263 --------------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                                          +..+|+|+|..+++|++ +...+++|+.+..||++.
T Consensus       197 ~~~~~~~~~~~~~~~~plg~R~g~peeiA~~v~fLaS-~~a~~iTG~~i~VDGG~T  251 (258)
T 4gkb_A          197 TFEDPEAKLAEIAAKVPLGRRFTTPDEIADTAVFLLS-PRASHTTGEWLFVDGGYT  251 (258)
T ss_dssp             ------CHHHHHHTTCTTTTSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTTT
T ss_pred             cccChHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhC-chhcCccCCeEEECCCcc
Confidence                                23579999999999997 788999999999999963

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=100.00  E-value=4.8e-46  Score=336.86  Aligned_cols=223  Identities=24%  Similarity=0.279  Sum_probs=200.1

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      .++||++|||||++|||+++|++|+++|++|++++|+.+++++.++++   +.++..+.+|++|+++++++++++.++||
T Consensus        26 rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~---g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G  102 (273)
T 4fgs_A           26 RLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI---GGGAVGIQADSANLAELDRLYEKVKAEAG  102 (273)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CTTCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             hhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc---CCCeEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            589999999999999999999999999999999999999999888877   45788999999999999999999999999


Q ss_pred             CccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccch
Q 022103          107 ALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILED  185 (302)
Q Consensus       107 ~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~  185 (302)
                      +||+||||||.... ++.+.+.++|++++++|+.|+++++|+++|+|++   .|+||+++|..+..+.+.          
T Consensus       103 ~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~---~G~IInisS~~~~~~~~~----------  169 (273)
T 4fgs_A          103 RIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLAR---GSSVVLTGSTAGSTGTPA----------  169 (273)
T ss_dssp             CEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE---EEEEEEECCGGGGSCCTT----------
T ss_pred             CCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhh---CCeEEEEeehhhccCCCC----------
Confidence            99999999998755 7899999999999999999999999999999975   489999999998766432          


Q ss_pred             hhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCCC--
Q 022103          186 EELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQG--  263 (302)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~~--  263 (302)
                                                      +.+|++||+|+.+|+|+||.|++++|||||+|+||+|+|+|.....  
T Consensus       170 --------------------------------~~~Y~asKaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~  217 (273)
T 4fgs_A          170 --------------------------------FSVYAASKAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAGK  217 (273)
T ss_dssp             --------------------------------CHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC---------
T ss_pred             --------------------------------chHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhhcc
Confidence                                            4789999999999999999999999999999999999999876541  


Q ss_pred             --------------------CCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          264 --------------------SHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       264 --------------------~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                                          ..+|||+|..+++|++ +...+++|+.+..||+..
T Consensus       218 ~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v~FLaS-d~a~~iTG~~i~VDGG~s  271 (273)
T 4fgs_A          218 DPVQQQGLLNALAAQVPMGRVGRAEEVAAAALFLAS-DDSSFVTGAELFVDGGSA  271 (273)
T ss_dssp             CHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTTT
T ss_pred             CchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC-chhcCccCCeEeECcChh
Confidence                                2579999999999997 788999999999999853

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=100.00  E-value=1.8e-46  Score=334.37  Aligned_cols=224  Identities=23%  Similarity=0.315  Sum_probs=200.7

Q ss_pred             cccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhh
Q 022103           25 KWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSN  104 (302)
Q Consensus        25 ~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~  104 (302)
                      .++++||++|||||++|||+++|+.|+++|++|++++|+..  ++..+++.+.+.++..+.+|++|+++++++++     
T Consensus         4 ~f~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~--~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~-----   76 (247)
T 4hp8_A            4 PFSLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAP--DETLDIIAKDGGNASALLIDFADPLAAKDSFT-----   76 (247)
T ss_dssp             TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCC--HHHHHHHHHTTCCEEEEECCTTSTTTTTTSST-----
T ss_pred             CcCCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcH--HHHHHHHHHhCCcEEEEEccCCCHHHHHHHHH-----
Confidence            47899999999999999999999999999999999999864  46677788888899999999999998877663     


Q ss_pred             CCCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCccccccc
Q 022103          105 FAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSIL  183 (302)
Q Consensus       105 ~g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~  183 (302)
                      ++++|+||||||+... ++.+.+.++|++++++|+.|+|+++|+++|+|.++...|+||++||..+..+.+.        
T Consensus        77 ~g~iDiLVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~~~--------  148 (247)
T 4hp8_A           77 DAGFDILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGGIR--------  148 (247)
T ss_dssp             TTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCSS--------
T ss_pred             hCCCCEEEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCCCC--------
Confidence            4899999999998765 6889999999999999999999999999999987645799999999998866433        


Q ss_pred             chhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC-
Q 022103          184 EDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ-  262 (302)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~-  262 (302)
                                                        ..+|++||+|+.+|+|+||.||+++|||||+|+||+|+|+|.... 
T Consensus       149 ----------------------------------~~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~~~~  194 (247)
T 4hp8_A          149 ----------------------------------VPSYTAAKHGVAGLTKLLANEWAAKGINVNAIAPGYIETNNTEALR  194 (247)
T ss_dssp             ----------------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHH
T ss_pred             ----------------------------------ChHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchhhcc
Confidence                                              378999999999999999999999999999999999999996532 


Q ss_pred             ----------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          263 ----------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       263 ----------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                                      +..+|+|+|..+++|++ +...+++|+.+..||++.
T Consensus       195 ~~~~~~~~~~~~~PlgR~g~peeiA~~v~fLaS-d~a~~iTG~~i~VDGG~~  245 (247)
T 4hp8_A          195 ADAARNKAILERIPAGRWGHSEDIAGAAVFLSS-AAADYVHGAILNVDGGWL  245 (247)
T ss_dssp             TSHHHHHHHHTTCTTSSCBCTHHHHHHHHHHTS-GGGTTCCSCEEEESTTGG
T ss_pred             cCHHHHHHHHhCCCCCCCcCHHHHHHHHHHHhC-chhcCCcCCeEEECcccc
Confidence                            23579999999999997 788999999999999875

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=100.00  E-value=1.1e-44  Score=322.10  Aligned_cols=215  Identities=29%  Similarity=0.360  Sum_probs=188.6

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      .+||++|||||++|||+++|++|+++|++|++++|+.++++.      ..+.++..+.+|++|+++++++++    ++|+
T Consensus         9 f~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~------~~~~~~~~~~~Dv~~~~~v~~~~~----~~g~   78 (242)
T 4b79_A            9 YAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHA------PRHPRIRREELDITDSQRLQRLFE----ALPR   78 (242)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTS------CCCTTEEEEECCTTCHHHHHHHHH----HCSC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhh------hhcCCeEEEEecCCCHHHHHHHHH----hcCC
Confidence            489999999999999999999999999999999999876542      234578999999999999988776    4699


Q ss_pred             ccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhh
Q 022103          108 LDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEE  187 (302)
Q Consensus       108 id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~  187 (302)
                      +|+||||||+.. ++.+.+.++|++++++|+.++++++|+++|+|+++  .|+||++||..+..+.+.            
T Consensus        79 iDiLVNNAGi~~-~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~--~G~IVnisS~~~~~~~~~------------  143 (242)
T 4b79_A           79 LDVLVNNAGISR-DREEYDLATFERVLRLNLSAAMLASQLARPLLAQR--GGSILNIASMYSTFGSAD------------  143 (242)
T ss_dssp             CSEEEECCCCCC-GGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--CEEEEEECCGGGTSCCSS------------
T ss_pred             CCEEEECCCCCC-CcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc--CCeEEEEeeccccCCCCC------------
Confidence            999999999864 46788999999999999999999999999999865  599999999998866433            


Q ss_pred             hcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCCC----
Q 022103          188 LSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQG----  263 (302)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~~----  263 (302)
                                                    ..+|++||+|+.+|+|+||.||+++|||||+|+||+|+|+|.....    
T Consensus       144 ------------------------------~~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~~~~~  193 (242)
T 4b79_A          144 ------------------------------RPAYSASKGAIVQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLKADVE  193 (242)
T ss_dssp             ------------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCC-----CCCHH
T ss_pred             ------------------------------CHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCCChhhhcccCCHH
Confidence                                          3789999999999999999999999999999999999999977642    


Q ss_pred             -------------CCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          264 -------------SHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       264 -------------~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                                   ..+|+|+|..+++|++ +...+++|+.+..||+++
T Consensus       194 ~~~~~~~~~PlgR~g~peeiA~~v~fLaS-d~a~~iTG~~l~VDGG~l  240 (242)
T 4b79_A          194 ATRRIMQRTPLARWGEAPEVASAAAFLCG-PGASFVTGAVLAVDGGYL  240 (242)
T ss_dssp             HHHHHHHTCTTCSCBCHHHHHHHHHHHTS-GGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHhcCCCCCCcCHHHHHHHHHHHhC-chhcCccCceEEECccHh
Confidence                         2579999999999997 788999999999999875

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=100.00  E-value=8.3e-44  Score=317.93  Aligned_cols=217  Identities=23%  Similarity=0.249  Sum_probs=193.5

Q ss_pred             CcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCcc
Q 022103           30 ETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALD  109 (302)
Q Consensus        30 ~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id  109 (302)
                      +|+||||||++|||+++|++|+++|++|++++|+.+++++..    +++.++..+.+|++|+++++++++++.++||++|
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~----~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iD   77 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFA----KERPNLFYFHGDVADPLTLKKFVEYAMEKLQRID   77 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH----TTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----HhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            389999999999999999999999999999999987766544    3456789999999999999999999999999999


Q ss_pred             EEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhh
Q 022103          110 ILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEEL  188 (302)
Q Consensus       110 ~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  188 (302)
                      +||||||+... ++.+.+.++|++++++|+.++++++|+++|+|.++  .|+||++||..+..+.+.             
T Consensus        78 iLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~--~G~IInisS~~~~~~~~~-------------  142 (247)
T 3ged_A           78 VLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKN--KGRIINIASTRAFQSEPD-------------  142 (247)
T ss_dssp             EEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT--TCEEEEECCGGGTSCCTT-------------
T ss_pred             EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc--CCcEEEEeecccccCCCC-------------
Confidence            99999998755 68899999999999999999999999999999876  599999999998766433             


Q ss_pred             cHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC------
Q 022103          189 SEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ------  262 (302)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~------  262 (302)
                                                   ..+|++||+|+.+|+|+||.|+++ |||||+|+||+|+|++....      
T Consensus       143 -----------------------------~~~Y~asKaal~~ltk~lA~ela~-~IrVN~I~PG~i~t~~~~~~~~~~~~  192 (247)
T 3ged_A          143 -----------------------------SEAYASAKGGIVALTHALAMSLGP-DVLVNCIAPGWINVTEQQEFTQEDCA  192 (247)
T ss_dssp             -----------------------------CHHHHHHHHHHHHHHHHHHHHHTT-TSEEEEEEECSBCCCC---CCHHHHH
T ss_pred             -----------------------------CHHHHHHHHHHHHHHHHHHHHHCC-CCEEEEEecCcCCCCCcHHHHHHHHh
Confidence                                         478999999999999999999997 99999999999999997764      


Q ss_pred             -----CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          263 -----GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       263 -----~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                           +..+|+|+|..+++|++ +  ++++|+.+..||+..
T Consensus       193 ~~Pl~R~g~pediA~~v~fL~s-~--~~iTG~~i~VDGG~s  230 (247)
T 3ged_A          193 AIPAGKVGTPKDISNMVLFLCQ-Q--DFITGETIIVDGGMS  230 (247)
T ss_dssp             TSTTSSCBCHHHHHHHHHHHHH-C--SSCCSCEEEESTTGG
T ss_pred             cCCCCCCcCHHHHHHHHHHHHh-C--CCCCCCeEEECcCHH
Confidence                 23689999999999997 2  589999999999864

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=100.00  E-value=5.1e-44  Score=322.13  Aligned_cols=223  Identities=22%  Similarity=0.233  Sum_probs=197.1

Q ss_pred             cccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhh
Q 022103           25 KWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSN  104 (302)
Q Consensus        25 ~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~  104 (302)
                      -++++||++|||||++|||+++|++|+++|++|++++|+.++          ...+..++.+|++++++++++++++.++
T Consensus         6 l~~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~----------~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   75 (261)
T 4h15_A            6 FLNLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPE----------GLPEELFVEADLTTKEGCAIVAEATRQR   75 (261)
T ss_dssp             CCCCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCT----------TSCTTTEEECCTTSHHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchh----------CCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            358999999999999999999999999999999999998642          1234567899999999999999999999


Q ss_pred             CCCccEEEEcCCCCCC---CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCccccc
Q 022103          105 FAALDILVNNAGVSFN---DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKS  181 (302)
Q Consensus       105 ~g~id~lv~~aG~~~~---~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~  181 (302)
                      ||++|+||||||+...   ++.+.+.++|++++++|+.++++++|+++|+|.++ +.|+||++||..+..+.        
T Consensus        76 ~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~-~~G~Iv~isS~~~~~~~--------  146 (261)
T 4h15_A           76 LGGVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVAR-GSGVVVHVTSIQRVLPL--------  146 (261)
T ss_dssp             TSSCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTSCC--------
T ss_pred             cCCCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhc-CCceEEEEEehhhccCC--------
Confidence            9999999999997532   57899999999999999999999999999999887 57999999999887553        


Q ss_pred             ccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCC
Q 022103          182 ILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG  261 (302)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~  261 (302)
                                                       |.+...|++||+|+++|+++||.|++++|||||+|+||+|+|+|...
T Consensus       147 ---------------------------------~~~~~~Y~asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~~  193 (261)
T 4h15_A          147 ---------------------------------PESTTAYAAAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIETEASVR  193 (261)
T ss_dssp             ---------------------------------TTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHH
T ss_pred             ---------------------------------CCccHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcchhh
Confidence                                             22347899999999999999999999999999999999999987431


Q ss_pred             ----------------------------C-CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcccCC
Q 022103          262 ----------------------------Q-GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVKS  300 (302)
Q Consensus       262 ----------------------------~-~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~  300 (302)
                                                  + +..+|||+|+.+++|++ +...+++|+.+..||+.+.+
T Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peevA~~v~fLaS-~~a~~itG~~i~VDGG~v~T  260 (261)
T 4h15_A          194 LAERLAKQAGTDLEGGKKIIMDGLGGIPLGRPAKPEEVANLIAFLAS-DRAASITGAEYTIDGGTVPT  260 (261)
T ss_dssp             HHHHHHHHTTCCHHHHHHHHHHHTTCCTTSSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTCSCC
T ss_pred             hhHHHHHhhccchhhHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhC-chhcCccCcEEEECCcCccc
Confidence                                        1 23579999999999997 78889999999999997653

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=100.00  E-value=2.9e-43  Score=316.04  Aligned_cols=227  Identities=17%  Similarity=0.167  Sum_probs=204.9

Q ss_pred             ccccCcEEEEeCCCc--hHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCC-CceeEEEeeCCCHHHHHHHHHHHH
Q 022103           26 WWSKETIAIVTGANK--GIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKG-LPVNFFQLDVSDPSSIEAFVSWFK  102 (302)
Q Consensus        26 ~~~~~k~vlItGas~--gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dlt~~~~~~~~~~~~~  102 (302)
                      ++++||++|||||+|  |||+++|++|+++|++|++++|+.+.++++.+++.+.+ .++.++++|++|+++++++++++.
T Consensus         2 ~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   81 (256)
T 4fs3_A            2 LNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIG   81 (256)
T ss_dssp             CCCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHH
Confidence            578999999999875  99999999999999999999999999999999888765 478999999999999999999999


Q ss_pred             hhCCCccEEEEcCCCCCC-----CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCc
Q 022103          103 SNFAALDILVNNAGVSFN-----DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNP  177 (302)
Q Consensus       103 ~~~g~id~lv~~aG~~~~-----~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~  177 (302)
                      ++||++|+||||||+...     .+.+.+.++|...+++|+.+++.+++.+.+.+++   .|+||++||..+..+.+.  
T Consensus        82 ~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~---~G~IVnisS~~~~~~~~~--  156 (256)
T 4fs3_A           82 KDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPE---GGSIVATTYLGGEFAVQN--  156 (256)
T ss_dssp             HHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTT---CEEEEEEECGGGTSCCTT--
T ss_pred             HHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhcc---CCEEEEEeccccccCccc--
Confidence            999999999999997632     3577899999999999999999999999998754   599999999998766432  


Q ss_pred             ccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCC
Q 022103          178 NIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTS  257 (302)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~  257 (302)
                                                              +..|++||+|+++|+++||.|++++|||||+|+||+|+|+
T Consensus       157 ----------------------------------------~~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~  196 (256)
T 4fs3_A          157 ----------------------------------------YNVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTL  196 (256)
T ss_dssp             ----------------------------------------THHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSG
T ss_pred             ----------------------------------------chhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCCh
Confidence                                                    4789999999999999999999999999999999999999


Q ss_pred             CCCCCC-----------------CCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          258 MTQGQG-----------------SHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       258 ~~~~~~-----------------~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                      |.....                 ..+|+|+|..+++|++ +...+++|+.+..||++.
T Consensus       197 ~~~~~~~~~~~~~~~~~~~Pl~R~g~peevA~~v~fL~S-d~a~~iTG~~i~VDGG~~  253 (256)
T 4fs3_A          197 SAKGVGGFNTILKEIKERAPLKRNVDQVEVGKTAAYLLS-DLSSGVTGENIHVDSGFH  253 (256)
T ss_dssp             GGTTCTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGG
T ss_pred             hhhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC-chhcCccCCEEEECcCHH
Confidence            987642                 2689999999999997 788899999999999864

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=100.00  E-value=2.8e-42  Score=312.81  Aligned_cols=256  Identities=20%  Similarity=0.229  Sum_probs=212.9

Q ss_pred             CCCCCCCCccccCCCCCcccccccccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCce
Q 022103            2 KSQEPDPNYFSSSSSSSSLVSSTKWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPV   81 (302)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~   81 (302)
                      |+.|-|-++...+...+++.....+++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.+.++
T Consensus         4 ~~~~~~~~~~~~~~g~~~m~~~~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~   83 (276)
T 3r1i_A            4 HHHHHMGTLEAQTQGPGSMSVLDLFDLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKA   83 (276)
T ss_dssp             -------------------CGGGGGCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCC
T ss_pred             cccccccceeccccCCCCcccccccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeE
Confidence            44566666665555555555555678999999999999999999999999999999999999999999999998888889


Q ss_pred             eEEEeeCCCHHHHHHHHHHHHhhCCCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCc
Q 022103           82 NFFQLDVSDPSSIEAFVSWFKSNFAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSR  160 (302)
Q Consensus        82 ~~~~~Dlt~~~~~~~~~~~~~~~~g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~  160 (302)
                      .++.+|++|+++++++++++.++++++|+||||||.... ++.+.+.++|++++++|+.++++++++++|.|.+++..++
T Consensus        84 ~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~  163 (276)
T 3r1i_A           84 LPIRCDVTQPDQVRGMLDQMTGELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGT  163 (276)
T ss_dssp             EEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEE
T ss_pred             EEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcE
Confidence            999999999999999999999999999999999998754 5788999999999999999999999999999988744589


Q ss_pred             EEEecCCCcccccccCcccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHcc
Q 022103          161 ILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYE  240 (302)
Q Consensus       161 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~  240 (302)
                      ||++||..+..+..                                        ++.+..|++||+|++.|+++++.|++
T Consensus       164 iv~isS~~~~~~~~----------------------------------------~~~~~~Y~asKaa~~~l~~~la~e~~  203 (276)
T 3r1i_A          164 IITTASMSGHIINI----------------------------------------PQQVSHYCTSKAAVVHLTKAMAVELA  203 (276)
T ss_dssp             EEEECCGGGTSCCC----------------------------------------SSCCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             EEEECchHhcccCC----------------------------------------CCCcchHHHHHHHHHHHHHHHHHHHh
Confidence            99999988865432                                        22347899999999999999999999


Q ss_pred             CCCcEEEEeecCcccCCCCCCC--------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          241 GEGISVNSYCPGFTQTSMTQGQ--------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       241 ~~gI~V~~v~PG~v~T~~~~~~--------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                      ++||+||+|+||+|+|+|.+..              +..+|+++|..+++|++ +...+++|+.+..+|+..
T Consensus       204 ~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s-~~~~~itG~~i~vdGG~~  274 (276)
T 3r1i_A          204 PHQIRVNSVSPGYIRTELVEPLADYHALWEPKIPLGRMGRPEELTGLYLYLAS-AASSYMTGSDIVIDGGYT  274 (276)
T ss_dssp             GGTEEEEEEEECCBCSTTTGGGGGGHHHHGGGSTTSSCBCGGGSHHHHHHHHS-GGGTTCCSCEEEESTTTT
T ss_pred             hcCcEEEEEeeCCCcCCccccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHcC-ccccCccCcEEEECcCcc
Confidence            9999999999999999997642              23689999999999997 677889999999999854

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=100.00  E-value=4.4e-42  Score=307.86  Aligned_cols=230  Identities=25%  Similarity=0.277  Sum_probs=208.7

Q ss_pred             cccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhh
Q 022103           25 KWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSN  104 (302)
Q Consensus        25 ~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~  104 (302)
                      .+++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.+.++.++.+|++|+++++++++++.++
T Consensus         7 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~   86 (256)
T 3gaf_A            7 PFHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQ   86 (256)
T ss_dssp             TTCCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999999999999999999888889999999999999999999999999


Q ss_pred             CCCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCccccccc
Q 022103          105 FAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSIL  183 (302)
Q Consensus       105 ~g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~  183 (302)
                      ++++|+||||||.... ++ +.+.++|+.++++|+.++++++++++|.|.++ +.++||++||..+..+.+         
T Consensus        87 ~g~id~lv~nAg~~~~~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~~~~---------  155 (256)
T 3gaf_A           87 FGKITVLVNNAGGGGPKPF-DMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKA-GGGAILNISSMAGENTNV---------  155 (256)
T ss_dssp             HSCCCEEEECCCCCCCCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEEECCGGGTCCCT---------
T ss_pred             cCCCCEEEECCCCCCCCCC-CCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEEcCHHHcCCCC---------
Confidence            9999999999998765 44 88999999999999999999999999999887 579999999998875532         


Q ss_pred             chhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC-
Q 022103          184 EDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ-  262 (302)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~-  262 (302)
                                                       ++.+|++||+|+++|+++++.|++++||+||+|+||+|+|+|.... 
T Consensus       156 ---------------------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~  202 (256)
T 3gaf_A          156 ---------------------------------RMASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATVL  202 (256)
T ss_dssp             ---------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHC
T ss_pred             ---------------------------------CchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhhcc
Confidence                                             2478999999999999999999999999999999999999975321 


Q ss_pred             ---------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcccC
Q 022103          263 ---------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVK  299 (302)
Q Consensus       263 ---------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  299 (302)
                                     +..+|+++|..+++|++ +...+++|+++..+|+...
T Consensus       203 ~~~~~~~~~~~~p~~r~~~~~dva~~~~~L~s-~~~~~itG~~i~vdgG~~~  253 (256)
T 3gaf_A          203 TPEIERAMLKHTPLGRLGEAQDIANAALFLCS-PAAAWISGQVLTVSGGGVQ  253 (256)
T ss_dssp             CHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTSCC
T ss_pred             CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcC-CcccCccCCEEEECCCccc
Confidence                           23689999999999997 6778899999999998654

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=1e-41  Score=309.02  Aligned_cols=231  Identities=28%  Similarity=0.243  Sum_probs=207.8

Q ss_pred             cccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEec-------------ChhhHHHHHHHHhhCCCceeEEEeeCCCH
Q 022103           25 KWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTAR-------------DVERGQRAVESLSEKGLPVNFFQLDVSDP   91 (302)
Q Consensus        25 ~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r-------------~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~   91 (302)
                      ..++++|++|||||++|||+++|++|+++|++|++++|             +.+++++..+++.+.+.++.++.+|++|+
T Consensus        10 ~~~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~   89 (280)
T 3pgx_A           10 AGSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDD   89 (280)
T ss_dssp             -CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCH
T ss_pred             ccccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCH
Confidence            35689999999999999999999999999999999998             67888888888888888999999999999


Q ss_pred             HHHHHHHHHHHhhCCCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcc
Q 022103           92 SSIEAFVSWFKSNFAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGT  170 (302)
Q Consensus        92 ~~~~~~~~~~~~~~g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~  170 (302)
                      ++++++++++.++++++|+||||||.... ++.+.+.++|++++++|+.++++++++++|+|.+++..++||++||..+.
T Consensus        90 ~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  169 (280)
T 3pgx_A           90 AALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGL  169 (280)
T ss_dssp             HHHHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGT
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhhc
Confidence            99999999999999999999999998754 57889999999999999999999999999999886447899999999887


Q ss_pred             cccccCcccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEee
Q 022103          171 LSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYC  250 (302)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~  250 (302)
                      .+.+                                          ++..|++||+|+++|+++|+.|++++||+||+|+
T Consensus       170 ~~~~------------------------------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~  207 (280)
T 3pgx_A          170 KATP------------------------------------------GNGHYSASKHGLTALTNTLAIELGEYGIRVNSIH  207 (280)
T ss_dssp             SCCT------------------------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEE
T ss_pred             cCCC------------------------------------------CchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEe
Confidence            5532                                          2478999999999999999999999999999999


Q ss_pred             cCcccCCCCCC------------------------CCCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          251 PGFTQTSMTQG------------------------QGSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       251 PG~v~T~~~~~------------------------~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                      ||+|+|+|...                        .+..+|+|+|+.+++|++ +...+++|+.+..+|+..
T Consensus       208 PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~p~dvA~~v~~L~s-~~~~~itG~~i~vdGG~~  278 (280)
T 3pgx_A          208 PYSVETPMIEPEAMMEIFARHPSFVHSFPPMPVQPNGFMTADEVADVVAWLAG-DGSGTLTGTQIPVDKGAL  278 (280)
T ss_dssp             ECSBCSTTCCHHHHHHHHHHCGGGGGGSCCBTTBCSSCBCHHHHHHHHHHHHS-GGGTTCSSCEEEESTTGG
T ss_pred             eCcccCcccchhhhhhhhhcCchhhhhhhhcccCCCCCCCHHHHHHHHHHHhC-ccccCCCCCEEEECCCcc
Confidence            99999998653                        123589999999999997 677889999999999854

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=100.00  E-value=1.7e-41  Score=308.21  Aligned_cols=231  Identities=19%  Similarity=0.123  Sum_probs=207.4

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecC----------------hhhHHHHHHHHhhCCCceeEEEeeCC
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARD----------------VERGQRAVESLSEKGLPVNFFQLDVS   89 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~----------------~~~~~~~~~~l~~~~~~~~~~~~Dlt   89 (302)
                      .++++|+++||||++|||+++|++|+++|++|++++|+                .+++++..+++...+.++.++.+|++
T Consensus         7 ~~l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~   86 (286)
T 3uve_A            7 GRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVR   86 (286)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTT
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCC
Confidence            46889999999999999999999999999999999887                67888888888887889999999999


Q ss_pred             CHHHHHHHHHHHHhhCCCccEEEEcCCCCCC--CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCC
Q 022103           90 DPSSIEAFVSWFKSNFAALDILVNNAGVSFN--DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSR  167 (302)
Q Consensus        90 ~~~~~~~~~~~~~~~~g~id~lv~~aG~~~~--~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~  167 (302)
                      |+++++++++++.+++|++|+||||||....  ++.+.+.++|++++++|+.++++++++++|.|.+++..++||++||.
T Consensus        87 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~  166 (286)
T 3uve_A           87 DYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSV  166 (286)
T ss_dssp             CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCG
T ss_pred             CHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECch
Confidence            9999999999999999999999999998654  37788999999999999999999999999999886446899999999


Q ss_pred             CcccccccCcccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEE
Q 022103          168 LGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVN  247 (302)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~  247 (302)
                      .+..+.+                                          ++..|++||+|+++|+++|+.|++++||+||
T Consensus       167 ~~~~~~~------------------------------------------~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn  204 (286)
T 3uve_A          167 GGLKAYP------------------------------------------HTGHYVAAKHGVVGLMRAFGVELGQHMIRVN  204 (286)
T ss_dssp             GGTSCCT------------------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred             hhccCCC------------------------------------------CccHHHHHHHHHHHHHHHHHHHhcccCeEEE
Confidence            8875533                                          2478999999999999999999999999999


Q ss_pred             EeecCcccCCCCCC------------------------------CCCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          248 SYCPGFTQTSMTQG------------------------------QGSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       248 ~v~PG~v~T~~~~~------------------------------~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                      +|+||+|+|+|...                              .+..+|+|+|..+++|++ +...+++|+.+..+|+.
T Consensus       205 ~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~r~~~p~dvA~~v~fL~s-~~a~~itG~~i~vdGG~  283 (286)
T 3uve_A          205 SVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMAPICQMFHTLPIPWVEPIDISNAVLFFAS-DEARYITGVTLPIDAGS  283 (286)
T ss_dssp             EEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHHTTCSSSCSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTG
T ss_pred             EEecCcccCCcccccchhhhccccccccchhhHHHHHHhhhccCCCcCCHHHHHHHHHHHcC-ccccCCcCCEEeECCcc
Confidence            99999999999753                              123579999999999997 67788999999999986


Q ss_pred             cC
Q 022103          298 VK  299 (302)
Q Consensus       298 ~~  299 (302)
                      ..
T Consensus       284 ~l  285 (286)
T 3uve_A          284 CL  285 (286)
T ss_dssp             GG
T ss_pred             cc
Confidence            53

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=100.00  E-value=2.9e-42  Score=310.73  Aligned_cols=241  Identities=24%  Similarity=0.280  Sum_probs=210.5

Q ss_pred             CCCcccccccccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhh-CCCceeEEEeeCCCHHHH
Q 022103           16 SSSSLVSSTKWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSE-KGLPVNFFQLDVSDPSSI   94 (302)
Q Consensus        16 ~~~~~~~~~~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dlt~~~~~   94 (302)
                      +..++.....+++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+ .+.++.++.+|++|++++
T Consensus         6 ~~~~~~~~~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v   85 (266)
T 4egf_A            6 TTTDDRYAGVLRLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAP   85 (266)
T ss_dssp             ----CCBCGGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHH
T ss_pred             cccchhcccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHH
Confidence            3333333445678999999999999999999999999999999999999999998888876 467899999999999999


Q ss_pred             HHHHHHHHhhCCCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCccccc
Q 022103           95 EAFVSWFKSNFAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSK  173 (302)
Q Consensus        95 ~~~~~~~~~~~g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~  173 (302)
                      +++++++.+.++++|+||||||.... ++.+.+.++|++++++|+.++++++++++|.|.+++..++||++||..+..+.
T Consensus        86 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~  165 (266)
T 4egf_A           86 AELARRAAEAFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPL  165 (266)
T ss_dssp             HHHHHHHHHHHTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC
T ss_pred             HHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccCC
Confidence            99999999999999999999998754 57889999999999999999999999999999886446899999999887553


Q ss_pred             ccCcccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCc
Q 022103          174 VRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGF  253 (302)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~  253 (302)
                      +                                          ++.+|++||+|+++|+++|+.|++++||+||+|+||+
T Consensus       166 ~------------------------------------------~~~~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~  203 (266)
T 4egf_A          166 P------------------------------------------DHYAYCTSKAGLVMATKVLARELGPHGIRANSVCPTV  203 (266)
T ss_dssp             T------------------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESC
T ss_pred             C------------------------------------------CChHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCC
Confidence            2                                          2478999999999999999999999999999999999


Q ss_pred             ccCCCCCCC-----------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcccC
Q 022103          254 TQTSMTQGQ-----------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVK  299 (302)
Q Consensus       254 v~T~~~~~~-----------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  299 (302)
                      |+|+|....                 +..+|+++|+.+++|++ +...+++|+.+..+|+...
T Consensus       204 v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~s-~~~~~itG~~i~vdGG~~~  265 (266)
T 4egf_A          204 VLTEMGQRVWGDEAKSAPMIARIPLGRFAVPHEVSDAVVWLAS-DAASMINGVDIPVDGGYTM  265 (266)
T ss_dssp             BCSHHHHHHTCSHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGGG
T ss_pred             CcCchhhhhccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC-chhcCccCcEEEECCCccC
Confidence            999974321                 23579999999999997 6778899999999998653

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=100.00  E-value=3.1e-41  Score=309.00  Aligned_cols=231  Identities=20%  Similarity=0.159  Sum_probs=208.1

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecC------------hhhHHHHHHHHhhCCCceeEEEeeCCCHHH
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARD------------VERGQRAVESLSEKGLPVNFFQLDVSDPSS   93 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~------------~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~   93 (302)
                      .++++|++|||||++|||+++|++|+++|++|++++|+            .+++++..+++...+.++.++.+|++|+++
T Consensus        24 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~  103 (299)
T 3t7c_A           24 GKVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDA  103 (299)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH
T ss_pred             cccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHH
Confidence            46899999999999999999999999999999999987            778888888888888899999999999999


Q ss_pred             HHHHHHHHHhhCCCccEEEEcCCCCCC--CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCccc
Q 022103           94 IEAFVSWFKSNFAALDILVNNAGVSFN--DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTL  171 (302)
Q Consensus        94 ~~~~~~~~~~~~g~id~lv~~aG~~~~--~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~  171 (302)
                      ++++++++.+.+|++|+||||||....  ++.+.+.++|++++++|+.++++++++++|.|.+++..++||++||..+..
T Consensus       104 v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~~  183 (299)
T 3t7c_A          104 MQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLR  183 (299)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGGTS
T ss_pred             HHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhcc
Confidence            999999999999999999999998654  378899999999999999999999999999998875579999999998876


Q ss_pred             ccccCcccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeec
Q 022103          172 SKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCP  251 (302)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~P  251 (302)
                      +.+.                                          +..|++||+|+++|+++|+.|++++||+||+|+|
T Consensus       184 ~~~~------------------------------------------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~P  221 (299)
T 3t7c_A          184 GAEN------------------------------------------IGNYIASKHGLHGLMRTMALELGPRNIRVNIVCP  221 (299)
T ss_dssp             CCTT------------------------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred             CCCC------------------------------------------cchHHHHHHHHHHHHHHHHHHhcccCcEEEEEec
Confidence            5332                                          4789999999999999999999999999999999


Q ss_pred             CcccCCCCCC------------------------------CCCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcccC
Q 022103          252 GFTQTSMTQG------------------------------QGSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVK  299 (302)
Q Consensus       252 G~v~T~~~~~------------------------------~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  299 (302)
                      |+|+|+|...                              .+..+|+|+|..+++|++ +...+++|+.+..+|+...
T Consensus       222 G~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~r~~~pedvA~~v~fL~s-~~a~~itG~~i~vdGG~~l  298 (299)
T 3t7c_A          222 SSVATPMLLNEPTYRMFRPDLENPTVEDFQVASRQMHVLPIPYVEPADISNAILFLVS-DDARYITGVSLPVDGGALL  298 (299)
T ss_dssp             SCBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHHHHSSSSCSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGGG
T ss_pred             CCccCccccccchhhhhhhhhccchhhHHHHHhhhhcccCcCCCCHHHHHHHHHHHhC-cccccCcCCEEeeCCCccc
Confidence            9999999753                              123579999999999997 6778899999999998653

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=100.00  E-value=2e-41  Score=304.93  Aligned_cols=232  Identities=22%  Similarity=0.220  Sum_probs=207.1

Q ss_pred             ccccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhh-CCC-ceeEEEeeCCCHHHHHHHHHHH
Q 022103           24 TKWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSE-KGL-PVNFFQLDVSDPSSIEAFVSWF  101 (302)
Q Consensus        24 ~~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~-~~~-~~~~~~~Dlt~~~~~~~~~~~~  101 (302)
                      ..+++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+ .+. ++.++.+|++|+++++++++++
T Consensus         2 ~~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   81 (265)
T 3lf2_A            2 KPYDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEAC   81 (265)
T ss_dssp             -CCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CccCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHH
Confidence            34678999999999999999999999999999999999999999999888876 333 4899999999999999999999


Q ss_pred             HhhCCCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccc
Q 022103          102 KSNFAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIK  180 (302)
Q Consensus       102 ~~~~g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~  180 (302)
                      .+.++++|+||||||.... ++.+.+.++|++++++|+.++++++++++|.|.++ +.++||++||..+..+.+      
T Consensus        82 ~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~~------  154 (265)
T 3lf2_A           82 ERTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESR-ADAAIVCVNSLLASQPEP------  154 (265)
T ss_dssp             HHHHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTS-TTEEEEEEEEGGGTSCCT------
T ss_pred             HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-CCeEEEEECCcccCCCCC------
Confidence            9999999999999998754 67889999999999999999999999999999876 579999999998875532      


Q ss_pred             cccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCC
Q 022103          181 SILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ  260 (302)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~  260 (302)
                                                          ++.+|++||+|+++|+++|+.|++++||+||+|+||+|+|+|..
T Consensus       155 ------------------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~  198 (265)
T 3lf2_A          155 ------------------------------------HMVATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWR  198 (265)
T ss_dssp             ------------------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH
T ss_pred             ------------------------------------CchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhh
Confidence                                                24789999999999999999999999999999999999998742


Q ss_pred             C---------------------------CCCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcccC
Q 022103          261 G---------------------------QGSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVK  299 (302)
Q Consensus       261 ~---------------------------~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  299 (302)
                      .                           .+..+|+|+|..+++|++ +...+++|+++..+|+...
T Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s-~~~~~itG~~i~vdGG~~~  263 (265)
T 3lf2_A          199 RRFEAREERELDWAQWTAQLARNKQIPLGRLGKPIEAARAILFLAS-PLSAYTTGSHIDVSGGLSR  263 (265)
T ss_dssp             HHHTC------CHHHHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHS-GGGTTCCSEEEEESSSCCC
T ss_pred             hhhhhhhhhccCHHHHHHHHhhccCCCcCCCcCHHHHHHHHHHHhC-chhcCcCCCEEEECCCCcC
Confidence            2                           123589999999999997 6778899999999998654

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=100.00  E-value=4.5e-42  Score=310.68  Aligned_cols=232  Identities=22%  Similarity=0.291  Sum_probs=210.4

Q ss_pred             ccccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHh
Q 022103           24 TKWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKS  103 (302)
Q Consensus        24 ~~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~  103 (302)
                      ..++++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.+.++.++.+|++|+++++++++++.+
T Consensus        20 ~~~~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~   99 (271)
T 4ibo_A           20 IIFDLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDE   99 (271)
T ss_dssp             GGGCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            34679999999999999999999999999999999999999999999999988888899999999999999999999999


Q ss_pred             hCCCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccc
Q 022103          104 NFAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSI  182 (302)
Q Consensus       104 ~~g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~  182 (302)
                      .++++|+||||||+... ++.+.+.++|++++++|+.++++++++++|.|.++ +.++||++||..+..+.+.       
T Consensus       100 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~iV~isS~~~~~~~~~-------  171 (271)
T 4ibo_A          100 QGIDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPR-GYGKIVNIGSLTSELARAT-------  171 (271)
T ss_dssp             HTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTSBCTT-------
T ss_pred             HCCCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEEccHHhCCCCCC-------
Confidence            99999999999998754 57889999999999999999999999999999886 5699999999888755332       


Q ss_pred             cchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC
Q 022103          183 LEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ  262 (302)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~  262 (302)
                                                         +.+|++||+|+++|+++|+.|++++||+||+|+||+|+|+|.+..
T Consensus       172 -----------------------------------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~  216 (271)
T 4ibo_A          172 -----------------------------------VAPYTVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQAL  216 (271)
T ss_dssp             -----------------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHH
T ss_pred             -----------------------------------chhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhc
Confidence                                               478999999999999999999999999999999999999986432


Q ss_pred             -----------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcccC
Q 022103          263 -----------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVK  299 (302)
Q Consensus       263 -----------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  299 (302)
                                       +..+|+|+|..+++|+. +...+++|+++..+|+...
T Consensus       217 ~~~~~~~~~~~~~~p~~r~~~pedva~~v~~L~s-~~~~~itG~~i~vdGG~~~  269 (271)
T 4ibo_A          217 IDNPEFDAWVKARTPAKRWGKPQELVGTAVFLSA-SASDYVNGQIIYVDGGMLS  269 (271)
T ss_dssp             HHCHHHHHHHHHHSTTCSCBCGGGGHHHHHHHHS-GGGTTCCSCEEEESTTGGG
T ss_pred             ccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC-ccccCCCCcEEEECCCeec
Confidence                             23679999999999987 6778899999999998653

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=100.00  E-value=3.4e-41  Score=306.68  Aligned_cols=231  Identities=24%  Similarity=0.222  Sum_probs=206.2

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      +++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++...+.++.++.+|++|+++++++++++.+.+
T Consensus        24 ~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  103 (283)
T 3v8b_A           24 MNQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKF  103 (283)
T ss_dssp             ---CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            56789999999999999999999999999999999999999999999998888899999999999999999999999999


Q ss_pred             CCccEEEEcCCCCC--CCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCccccccc
Q 022103          106 AALDILVNNAGVSF--NDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSIL  183 (302)
Q Consensus       106 g~id~lv~~aG~~~--~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~  183 (302)
                      |++|+||||||+..  .++.+.+.++|++++++|+.++++++++++|.|+++ +.++||++||..+.....         
T Consensus       104 g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~Iv~isS~~~~~~~~---------  173 (283)
T 3v8b_A          104 GHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQR-GGGAIVVVSSINGTRTFT---------  173 (283)
T ss_dssp             SCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCSBTTTBCC---------
T ss_pred             CCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCceEEEEcChhhccCCC---------
Confidence            99999999999863  467889999999999999999999999999999887 579999999988864211         


Q ss_pred             chhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC-
Q 022103          184 EDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ-  262 (302)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~-  262 (302)
                                                     .+++.+|++||+|+++|+++|+.|++++||+||+|+||+|+|+|.... 
T Consensus       174 -------------------------------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~  222 (283)
T 3v8b_A          174 -------------------------------TPGATAYTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTK  222 (283)
T ss_dssp             -------------------------------STTCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTT
T ss_pred             -------------------------------CCCchHHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCcccccc
Confidence                                           123478999999999999999999999999999999999999997643 


Q ss_pred             -----------------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          263 -----------------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       263 -----------------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                                             +..+|+|+|..+++|++ +...+++|+.+..+|+..
T Consensus       223 ~~~~~~~~~~~~~~~~~~p~~~~r~~~pedvA~~v~fL~s-~~a~~itG~~i~vdGG~~  280 (283)
T 3v8b_A          223 LRHEEETAIPVEWPKGQVPITDGQPGRSEDVAELIRFLVS-ERARHVTGSPVWIDGGQG  280 (283)
T ss_dssp             BCCHHHHSCCCBCTTCSCGGGTTCCBCHHHHHHHHHHHTS-GGGTTCCSCEEEESTTHH
T ss_pred             cccchhhhhhhhhhhhcCccccCCCCCHHHHHHHHHHHcC-ccccCCcCCEEEECcCcc
Confidence                                   12478999999999997 677889999999999853

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=100.00  E-value=3.8e-41  Score=305.20  Aligned_cols=230  Identities=23%  Similarity=0.254  Sum_probs=206.6

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecC------------hhhHHHHHHHHhhCCCceeEEEeeCCCHHH
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARD------------VERGQRAVESLSEKGLPVNFFQLDVSDPSS   93 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~------------~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~   93 (302)
                      .++++|++|||||++|||+++|++|+++|++|++++|+            .+++++..+++.+.+.++.++.+|++|+++
T Consensus         6 ~~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~   85 (281)
T 3s55_A            6 ADFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAA   85 (281)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHH
Confidence            46889999999999999999999999999999999997            667777888888778899999999999999


Q ss_pred             HHHHHHHHHhhCCCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccc
Q 022103           94 IEAFVSWFKSNFAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLS  172 (302)
Q Consensus        94 ~~~~~~~~~~~~g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~  172 (302)
                      ++++++++.+.+|++|+||||||+... ++.+.+.++|++++++|+.++++++++++|.|.++ +.++||++||..+..+
T Consensus        86 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~  164 (281)
T 3s55_A           86 LESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKR-NYGRIVTVSSMLGHSA  164 (281)
T ss_dssp             HHHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGGSC
T ss_pred             HHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCCEEEEECChhhcCC
Confidence            999999999999999999999998754 57889999999999999999999999999999876 5799999999988755


Q ss_pred             cccCcccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecC
Q 022103          173 KVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPG  252 (302)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG  252 (302)
                      .+.                                          +.+|++||+|+++|+++|+.|++++||+||+|+||
T Consensus       165 ~~~------------------------------------------~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG  202 (281)
T 3s55_A          165 NFA------------------------------------------QASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPG  202 (281)
T ss_dssp             CTT------------------------------------------CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEC
T ss_pred             CCC------------------------------------------CchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecC
Confidence            332                                          47899999999999999999999999999999999


Q ss_pred             cccCCCCCC------------------------------CCCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcccC
Q 022103          253 FTQTSMTQG------------------------------QGSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVK  299 (302)
Q Consensus       253 ~v~T~~~~~------------------------------~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  299 (302)
                      +|+|+|.+.                              .+..+|+++|..+++|++ +...+++|+++..+|+...
T Consensus       203 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dvA~~v~~L~s-~~~~~itG~~i~vdgG~~~  278 (281)
T 3s55_A          203 NIETPMTHNDFVFGTMRPDLEKPTLKDVESVFASLHLQYAPFLKPEEVTRAVLFLVD-EASSHITGTVLPIDAGATA  278 (281)
T ss_dssp             SBCSTTTSSHHHHHC-------CCHHHHHHHHHHHCSSSCSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGGG
T ss_pred             cccCccccchhhhccccccccccchhHHHHHHHhhhccCcCCCCHHHHHHHHHHHcC-CcccCCCCCEEEECCCccc
Confidence            999999753                              123579999999999997 6778899999999998654

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=100.00  E-value=2.2e-41  Score=306.34  Aligned_cols=230  Identities=23%  Similarity=0.177  Sum_probs=207.0

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEec-------------ChhhHHHHHHHHhhCCCceeEEEeeCCCHH
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTAR-------------DVERGQRAVESLSEKGLPVNFFQLDVSDPS   92 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r-------------~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~   92 (302)
                      .++++|++|||||++|||+++|++|+++|++|++++|             +.+++++..+++...+.++.++.+|++|++
T Consensus         7 ~~l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   86 (277)
T 3tsc_A            7 GKLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFD   86 (277)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHH
T ss_pred             cccCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHH
Confidence            4688999999999999999999999999999999998             677888888888888889999999999999


Q ss_pred             HHHHHHHHHHhhCCCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCccc
Q 022103           93 SIEAFVSWFKSNFAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTL  171 (302)
Q Consensus        93 ~~~~~~~~~~~~~g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~  171 (302)
                      +++++++++.++++++|+||||||.... ++.+.+.++|++++++|+.++++++++++|.|.+++..++||++||..+..
T Consensus        87 ~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~  166 (277)
T 3tsc_A           87 RLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMK  166 (277)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhCC
Confidence            9999999999999999999999998755 577899999999999999999999999999998864468999999998875


Q ss_pred             ccccCcccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeec
Q 022103          172 SKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCP  251 (302)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~P  251 (302)
                      +.+                                          ++..|++||+|+++|+++|+.|++++||+||+|+|
T Consensus       167 ~~~------------------------------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~P  204 (277)
T 3tsc_A          167 MQP------------------------------------------FMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHP  204 (277)
T ss_dssp             CCS------------------------------------------SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred             CCC------------------------------------------CchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEe
Confidence            532                                          24789999999999999999999999999999999


Q ss_pred             CcccCCCCCC-------------------------CCCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          252 GFTQTSMTQG-------------------------QGSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       252 G~v~T~~~~~-------------------------~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                      |+|+|+|...                         .+..+|+++|..+++|++ +...+++|+.+..+|+..
T Consensus       205 G~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~r~~~pedvA~~v~~L~s-~~~~~itG~~i~vdGG~~  275 (277)
T 3tsc_A          205 GPVNTPMGSGDMVTAVGQAMETNPQLSHVLTPFLPDWVAEPEDIADTVCWLAS-DESRKVTAAQIPVDQGST  275 (277)
T ss_dssp             SSBSSGGGSHHHHHHHHHHHHTCGGGTTTTCCSSSCSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGG
T ss_pred             CCCcCCcccchhhhhhhhcccccHHHHHHhhhccCCCCCCHHHHHHHHHHHhC-ccccCCcCCEEeeCCCcc
Confidence            9999998542                         123589999999999997 677889999999999853

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=100.00  E-value=1.7e-41  Score=302.69  Aligned_cols=226  Identities=29%  Similarity=0.370  Sum_probs=204.4

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      +++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++..   +..++.+|++|+++++++++++.+++
T Consensus         5 ~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~Dv~d~~~v~~~~~~~~~~~   81 (248)
T 3op4_A            5 MNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGD---NGKGMALNVTNPESIEAVLKAITDEF   81 (248)
T ss_dssp             TCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGG---GEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcc---cceEEEEeCCCHHHHHHHHHHHHHHc
Confidence            568899999999999999999999999999999999999998888887754   57889999999999999999999999


Q ss_pred             CCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccc
Q 022103          106 AALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILE  184 (302)
Q Consensus       106 g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~  184 (302)
                      |++|+||||||+... ++.+.+.++|++++++|+.++++++++++|.|.++ +.++||++||..+..+.+          
T Consensus        82 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~-~~g~iv~isS~~~~~~~~----------  150 (248)
T 3op4_A           82 GGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKK-RQGRIINVGSVVGTMGNA----------  150 (248)
T ss_dssp             CCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCHHHHHCCT----------
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCCEEEEEcchhhcCCCC----------
Confidence            999999999998755 57889999999999999999999999999999876 579999999988875532          


Q ss_pred             hhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC--
Q 022103          185 DEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ--  262 (302)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~--  262 (302)
                                                      ++.+|++||+|+++|+++++.|++++||+||+|+||+++|+|.+..  
T Consensus       151 --------------------------------~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~  198 (248)
T 3op4_A          151 --------------------------------GQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKALND  198 (248)
T ss_dssp             --------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTTSCH
T ss_pred             --------------------------------CChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhhcCH
Confidence                                            2478999999999999999999999999999999999999997653  


Q ss_pred             -------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          263 -------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       263 -------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                                   +..+|+++|..+++|++ +...+++|+++..+|+..
T Consensus       199 ~~~~~~~~~~p~~r~~~p~dva~~v~~L~s-~~~~~itG~~i~vdgG~~  246 (248)
T 3op4_A          199 EQRTATLAQVPAGRLGDPREIASAVAFLAS-PEAAYITGETLHVNGGMY  246 (248)
T ss_dssp             HHHHHHHHTCTTCSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTSS
T ss_pred             HHHHHHHhcCCCCCCcCHHHHHHHHHHHcC-CccCCccCcEEEECCCee
Confidence                         23589999999999997 677889999999999854

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=1.9e-41  Score=304.71  Aligned_cols=230  Identities=23%  Similarity=0.238  Sum_probs=207.2

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCC-CceeEEEeeCCCHHHHHHHHHHHHhh
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKG-LPVNFFQLDVSDPSSIEAFVSWFKSN  104 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dlt~~~~~~~~~~~~~~~  104 (302)
                      +++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.+ .++.++.+|++|+++++++++++.++
T Consensus         6 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   85 (262)
T 3pk0_A            6 FDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEE   85 (262)
T ss_dssp             TCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            56899999999999999999999999999999999999999999999998766 68899999999999999999999999


Q ss_pred             CCCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcc-cccccCcccccc
Q 022103          105 FAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGT-LSKVRNPNIKSI  182 (302)
Q Consensus       105 ~g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~-~~~~~~~~~~~~  182 (302)
                      ++++|+||||||.... ++.+.+.++|++++++|+.++++++++++|.|.++ +.++||++||..+. .+.         
T Consensus        86 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~-~~g~iv~isS~~~~~~~~---------  155 (262)
T 3pk0_A           86 FGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIAS-GSGRVVLTSSITGPITGY---------  155 (262)
T ss_dssp             HSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-SSCEEEEECCSBTTTBCC---------
T ss_pred             hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEEechhhccCCC---------
Confidence            9999999999998754 67889999999999999999999999999999886 57999999998875 332         


Q ss_pred             cchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC
Q 022103          183 LEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ  262 (302)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~  262 (302)
                                                       +++..|++||++++.|+++++.|++++||+||+|+||+|+|++....
T Consensus       156 ---------------------------------~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~  202 (262)
T 3pk0_A          156 ---------------------------------PGWSHYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLEN  202 (262)
T ss_dssp             ---------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHTT
T ss_pred             ---------------------------------CCChhhHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCcccccc
Confidence                                             23478999999999999999999999999999999999999875432


Q ss_pred             ---------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcccC
Q 022103          263 ---------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVK  299 (302)
Q Consensus       263 ---------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  299 (302)
                                     +..+|+++|..+++|++ +...+++|+++..+|+...
T Consensus       203 ~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~s-~~~~~itG~~i~vdGG~~~  253 (262)
T 3pk0_A          203 GEEYIASMARSIPAGALGTPEDIGHLAAFLAT-KEAGYITGQAIAVDGGQVL  253 (262)
T ss_dssp             CHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTTTC
T ss_pred             CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC-ccccCCcCCEEEECCCeec
Confidence                           23589999999999997 6778899999999998654

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=100.00  E-value=3.5e-41  Score=302.03  Aligned_cols=232  Identities=22%  Similarity=0.222  Sum_probs=207.0

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      ..+++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.+.++.++.+|++|+++++++++++.+++
T Consensus         2 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   81 (257)
T 3imf_A            2 NAMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKF   81 (257)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            35789999999999999999999999999999999999999999999998878889999999999999999999999999


Q ss_pred             CCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccc
Q 022103          106 AALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILE  184 (302)
Q Consensus       106 g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~  184 (302)
                      |++|+||||||.... ++.+.+.++|+.++++|+.++++++++++|.|.++...++||++||..+..+.+          
T Consensus        82 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------  151 (257)
T 3imf_A           82 GRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAGP----------  151 (257)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSCCT----------
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccCCC----------
Confidence            999999999997654 678899999999999999999999999999995554679999999988875532          


Q ss_pred             hhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHcc-CCCcEEEEeecCcccCCCCCCC-
Q 022103          185 DEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYE-GEGISVNSYCPGFTQTSMTQGQ-  262 (302)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~-~~gI~V~~v~PG~v~T~~~~~~-  262 (302)
                                                      ++..|++||+|+++|+++|+.|++ ++||+||+|+||+|+|++.... 
T Consensus       152 --------------------------------~~~~Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~  199 (257)
T 3imf_A          152 --------------------------------GVIHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKL  199 (257)
T ss_dssp             --------------------------------TCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC---
T ss_pred             --------------------------------CcHHHHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhc
Confidence                                            247899999999999999999997 6799999999999999974421 


Q ss_pred             -----------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcccCC
Q 022103          263 -----------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVKS  300 (302)
Q Consensus       263 -----------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~  300 (302)
                                       +..+|+++|..+++|++ +...+++|+++..+|+....
T Consensus       200 ~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s-~~~~~itG~~i~vdGG~~~~  253 (257)
T 3imf_A          200 WISEEMAKRTIQSVPLGRLGTPEEIAGLAYYLCS-DEAAYINGTCMTMDGGQHLH  253 (257)
T ss_dssp             ----CCSHHHHTTSTTCSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTTTSC
T ss_pred             ccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcC-chhcCccCCEEEECCCcccC
Confidence                             12589999999999997 67788999999999987543

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=100.00  E-value=5e-41  Score=301.46  Aligned_cols=227  Identities=23%  Similarity=0.250  Sum_probs=206.4

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcCCEEEEE-ecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELGLTVILT-ARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G~~V~l~-~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      ++|++|||||++|||+++|++|+++|++|+++ +|+.+++++..+++.+.+.++.++.+|++|+++++++++++.+.+++
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGR   82 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            68999999999999999999999999999986 89999999999999888889999999999999999999999999999


Q ss_pred             ccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchh
Q 022103          108 LDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDE  186 (302)
Q Consensus       108 id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~  186 (302)
                      +|+||||||.... ++.+.+.++|+.++++|+.++++++++++|.|.++ +.++||++||..+..+.+            
T Consensus        83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~-~~g~iv~isS~~~~~~~~------------  149 (258)
T 3oid_A           83 LDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKN-GGGHIVSISSLGSIRYLE------------  149 (258)
T ss_dssp             CCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTT-TCEEEEEEEEGGGTSBCT------------
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEECchhhCCCCC------------
Confidence            9999999997644 67889999999999999999999999999999887 579999999988875532            


Q ss_pred             hhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCCC---
Q 022103          187 ELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQG---  263 (302)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~~---  263 (302)
                                                    ++..|++||+|+++|+++|+.|++++||+||+|+||+|+|+|.+...   
T Consensus       150 ------------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~  199 (258)
T 3oid_A          150 ------------------------------NYTTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPNRE  199 (258)
T ss_dssp             ------------------------------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCTTHH
T ss_pred             ------------------------------CcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhcccCH
Confidence                                          24789999999999999999999999999999999999999876532   


Q ss_pred             --------------CCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcccC
Q 022103          264 --------------SHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVK  299 (302)
Q Consensus       264 --------------~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  299 (302)
                                    ..+|+++|..+++|++ +...+++|+.+..+|+...
T Consensus       200 ~~~~~~~~~~p~~r~~~~~dva~~v~~L~s-~~~~~itG~~i~vdGG~~~  248 (258)
T 3oid_A          200 DLLEDARQNTPAGRMVEIKDMVDTVEFLVS-SKADMIRGQTIIVDGGRSL  248 (258)
T ss_dssp             HHHHHHHHHCTTSSCBCHHHHHHHHHHHTS-STTTTCCSCEEEESTTGGG
T ss_pred             HHHHHHHhcCCCCCCcCHHHHHHHHHHHhC-cccCCccCCEEEECCCccC
Confidence                          3689999999999997 6778899999999998654

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=100.00  E-value=7e-42  Score=309.22  Aligned_cols=232  Identities=28%  Similarity=0.337  Sum_probs=208.6

Q ss_pred             ccccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHh
Q 022103           24 TKWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKS  103 (302)
Q Consensus        24 ~~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~  103 (302)
                      +..++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.+.++.++.+|++|.++++++++++.+
T Consensus        22 m~~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  101 (270)
T 3ftp_A           22 MDKTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLK  101 (270)
T ss_dssp             -CCTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHH
Confidence            34568999999999999999999999999999999999999999999998887777899999999999999999999999


Q ss_pred             hCCCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccc
Q 022103          104 NFAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSI  182 (302)
Q Consensus       104 ~~g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~  182 (302)
                      +++++|+||||||+... ++.+.+.++|++++++|+.++++++++++|.|.++ +.++||++||..+..+.+        
T Consensus       102 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~~~~--------  172 (270)
T 3ftp_A          102 EFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKA-RGGRIVNITSVVGSAGNP--------  172 (270)
T ss_dssp             HHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCHHHHHCCT--------
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCCEEEEECchhhCCCCC--------
Confidence            99999999999998754 57889999999999999999999999999999876 579999999988875532        


Q ss_pred             cchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC
Q 022103          183 LEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ  262 (302)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~  262 (302)
                                                        ++.+|++||+|+++|+++|+.|++++||+||+|+||+|+|+|....
T Consensus       173 ----------------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~  218 (270)
T 3ftp_A          173 ----------------------------------GQVNYAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKGL  218 (270)
T ss_dssp             ----------------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHHS
T ss_pred             ----------------------------------CchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhhc
Confidence                                              2478999999999999999999999999999999999999985432


Q ss_pred             ---------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcccC
Q 022103          263 ---------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVK  299 (302)
Q Consensus       263 ---------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  299 (302)
                                     +..+|+++|..+++|++ +...+++|+++..+|+...
T Consensus       219 ~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s-~~~~~itG~~i~vdGG~~~  269 (270)
T 3ftp_A          219 PQEQQTALKTQIPLGRLGSPEDIAHAVAFLAS-PQAGYITGTTLHVNGGMFM  269 (270)
T ss_dssp             CHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTSSC
T ss_pred             CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhC-CCcCCccCcEEEECCCccc
Confidence                           23589999999999997 6778899999999998653

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=100.00  E-value=2.9e-41  Score=304.89  Aligned_cols=234  Identities=27%  Similarity=0.323  Sum_probs=208.1

Q ss_pred             cccccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEec-ChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHH
Q 022103           23 STKWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTAR-DVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWF  101 (302)
Q Consensus        23 ~~~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r-~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~  101 (302)
                      +..+++++|++|||||++|||+++|++|+++|++|++++| +.+.++...+++.+.+.++.++.+|++|+++++++++++
T Consensus        21 m~~~~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~  100 (269)
T 4dmm_A           21 MTALPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAV  100 (269)
T ss_dssp             ---CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHH
T ss_pred             ccccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence            3456789999999999999999999999999999999988 667788888888888889999999999999999999999


Q ss_pred             HhhCCCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccc
Q 022103          102 KSNFAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIK  180 (302)
Q Consensus       102 ~~~~g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~  180 (302)
                      .+++|++|+||||||.... ++.+.+.++|++++++|+.++++++++++|.|.++ +.++||++||..+..+.+      
T Consensus       101 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~~~~------  173 (269)
T 4dmm_A          101 IERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQ-RSGRIINIASVVGEMGNP------  173 (269)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEEEECCHHHHHCCT------
T ss_pred             HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEEEECchhhcCCCC------
Confidence            9999999999999998754 57789999999999999999999999999999876 579999999988765532      


Q ss_pred             cccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCC
Q 022103          181 SILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ  260 (302)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~  260 (302)
                                                          ++.+|++||+|+++|+++|+.|++++||+||+|+||+|+|+|..
T Consensus       174 ------------------------------------~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~  217 (269)
T 4dmm_A          174 ------------------------------------GQANYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTS  217 (269)
T ss_dssp             ------------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSC
T ss_pred             ------------------------------------CchhHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCcccc
Confidence                                                24789999999999999999999999999999999999999975


Q ss_pred             CC------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcccC
Q 022103          261 GQ------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVK  299 (302)
Q Consensus       261 ~~------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  299 (302)
                      ..            ...+|+++|..+++|+..+...+++|+++..+|+...
T Consensus       218 ~~~~~~~~~~~p~~r~~~~~dvA~~v~~l~s~~~~~~itG~~i~vdGG~~~  268 (269)
T 4dmm_A          218 ELAAEKLLEVIPLGRYGEAAEVAGVVRFLAADPAAAYITGQVINIDGGLVM  268 (269)
T ss_dssp             HHHHHHHGGGCTTSSCBCHHHHHHHHHHHHHCGGGGGCCSCEEEESTTSCC
T ss_pred             cccHHHHHhcCCCCCCCCHHHHHHHHHHHhCCcccCCCcCCEEEECCCeec
Confidence            42            2468999999999999844678899999999998653

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=100.00  E-value=5.5e-41  Score=304.98  Aligned_cols=230  Identities=27%  Similarity=0.228  Sum_probs=207.7

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      .++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.+.++.++.+|++|+++++++++++.+++
T Consensus         4 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   83 (280)
T 3tox_A            4 SRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRF   83 (280)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            45789999999999999999999999999999999999999999999998878889999999999999999999999999


Q ss_pred             CCccEEEEcCCCCC--CCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcc-cccccCcccccc
Q 022103          106 AALDILVNNAGVSF--NDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGT-LSKVRNPNIKSI  182 (302)
Q Consensus       106 g~id~lv~~aG~~~--~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~-~~~~~~~~~~~~  182 (302)
                      +++|+||||||+..  .++.+.+.++|++++++|+.|+++++++++|.|.++ +.++||++||..+. .+.         
T Consensus        84 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~~~~---------  153 (280)
T 3tox_A           84 GGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAAL-GGGSLTFTSSFVGHTAGF---------  153 (280)
T ss_dssp             SCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEEECCSBTTTBCC---------
T ss_pred             CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCCEEEEEcChhhCcCCC---------
Confidence            99999999999763  367889999999999999999999999999999987 57899999998876 222         


Q ss_pred             cchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCC-
Q 022103          183 LEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG-  261 (302)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~-  261 (302)
                                                       +++.+|++||+|+++|+++|+.|++++||+||+|+||+|+|++... 
T Consensus       154 ---------------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~  200 (280)
T 3tox_A          154 ---------------------------------AGVAPYAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFAN  200 (280)
T ss_dssp             ---------------------------------TTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGG
T ss_pred             ---------------------------------CCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhh
Confidence                                             2347899999999999999999999999999999999999998643 


Q ss_pred             C------------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcccC
Q 022103          262 Q------------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVK  299 (302)
Q Consensus       262 ~------------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  299 (302)
                      .                  +..+|+++|..+++|++ +...+++|+++..+|+...
T Consensus       201 ~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s-~~a~~itG~~i~vdGG~~~  255 (280)
T 3tox_A          201 LPGAAPETRGFVEGLHALKRIARPEEIAEAALYLAS-DGASFVTGAALLADGGASV  255 (280)
T ss_dssp             STTCCTHHHHHHHTTSTTSSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGGG
T ss_pred             ccccCHHHHHHHhccCccCCCcCHHHHHHHHHHHhC-ccccCCcCcEEEECCCccc
Confidence            1                  12579999999999997 6778899999999998654

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=6.4e-41  Score=301.46  Aligned_cols=229  Identities=24%  Similarity=0.284  Sum_probs=207.0

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      ..+++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.+.++.++.+|++|+++++++++++.+++
T Consensus         7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   86 (264)
T 3ucx_A            7 GLLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAY   86 (264)
T ss_dssp             CTTTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCcCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            35789999999999999999999999999999999999999999999998888899999999999999999999999999


Q ss_pred             CCccEEEEcCCCCC--CCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCccccccc
Q 022103          106 AALDILVNNAGVSF--NDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSIL  183 (302)
Q Consensus       106 g~id~lv~~aG~~~--~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~  183 (302)
                      +++|+||||||...  .++.+.+.++|++++++|+.++++++++++|.|.++  .++||++||..+..+.+         
T Consensus        87 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~---------  155 (264)
T 3ucx_A           87 GRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEES--KGAVVNVNSMVVRHSQA---------  155 (264)
T ss_dssp             SCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHH--TCEEEEECCGGGGCCCT---------
T ss_pred             CCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc--CCEEEEECcchhccCCC---------
Confidence            99999999999753  367889999999999999999999999999999876  39999999998875532         


Q ss_pred             chhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC-
Q 022103          184 EDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ-  262 (302)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~-  262 (302)
                                                       ++.+|++||+|+++|+++|+.|++++||+||+|+||+|+|+|.+.. 
T Consensus       156 ---------------------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~  202 (264)
T 3ucx_A          156 ---------------------------------KYGAYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYF  202 (264)
T ss_dssp             ---------------------------------TCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHH
T ss_pred             ---------------------------------ccHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccccHHHHH
Confidence                                             2478999999999999999999999999999999999999874321 


Q ss_pred             -------------------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcccC
Q 022103          263 -------------------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVK  299 (302)
Q Consensus       263 -------------------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  299 (302)
                                               +..+|+|+|..+++|++ +...+++|+++..+|+...
T Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~L~s-~~~~~itG~~i~vdGG~~~  263 (264)
T 3ucx_A          203 EHQAGKYGTSVEDIYNAAAAGSDLKRLPTEDEVASAILFMAS-DLASGITGQALDVNCGEYK  263 (264)
T ss_dssp             HHHHHHTTCCHHHHHHHHHTTSSSSSCCBHHHHHHHHHHHHS-GGGTTCCSCEEEESTTSSC
T ss_pred             HhhhhhcCCCHHHHHHHHhccCCcccCCCHHHHHHHHHHHcC-ccccCCCCCEEEECCCccC
Confidence                                     23689999999999997 6778899999999998653

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=100.00  E-value=1.1e-40  Score=301.59  Aligned_cols=232  Identities=24%  Similarity=0.201  Sum_probs=203.7

Q ss_pred             cccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecC------------hhhHHHHHHHHhhCCCceeEEEeeCCCHH
Q 022103           25 KWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARD------------VERGQRAVESLSEKGLPVNFFQLDVSDPS   92 (302)
Q Consensus        25 ~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~------------~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~   92 (302)
                      ..++++|++|||||++|||+++|++|+++|++|++++|+            .++++...+++...+.++.++.+|++|++
T Consensus         8 ~~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   87 (278)
T 3sx2_A            8 EGPLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRE   87 (278)
T ss_dssp             -CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHH
T ss_pred             CCCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHH
Confidence            356899999999999999999999999999999999987            77788888888777789999999999999


Q ss_pred             HHHHHHHHHHhhCCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccc
Q 022103           93 SIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLS  172 (302)
Q Consensus        93 ~~~~~~~~~~~~~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~  172 (302)
                      +++++++++.++++++|+||||||+....   .+.++|++++++|+.++++++++++|.|.+++..++||++||..+..+
T Consensus        88 ~v~~~~~~~~~~~g~id~lv~nAg~~~~~---~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~  164 (278)
T 3sx2_A           88 SLSAALQAGLDELGRLDIVVANAGIAPMS---AGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAG  164 (278)
T ss_dssp             HHHHHHHHHHHHHCCCCEEEECCCCCCCS---STHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSC
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCCCC---CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcCC
Confidence            99999999999999999999999986543   268999999999999999999999999988644789999999988765


Q ss_pred             cccCcccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecC
Q 022103          173 KVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPG  252 (302)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG  252 (302)
                      ....                                      ++++.+|++||+|+++|+++|+.|++++||+||+|+||
T Consensus       165 ~~~~--------------------------------------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG  206 (278)
T 3sx2_A          165 VGSA--------------------------------------DPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPS  206 (278)
T ss_dssp             CCCS--------------------------------------SHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEES
T ss_pred             CccC--------------------------------------CCCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecC
Confidence            3211                                      13347899999999999999999999999999999999


Q ss_pred             cccCCCCCCC-------------------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          253 FTQTSMTQGQ-------------------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       253 ~v~T~~~~~~-------------------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                      +|+|+|....                         ...+|+++|..+++|++ +...+++|+.+..+|+..
T Consensus       207 ~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~p~dvA~~v~~l~s-~~~~~itG~~i~vdGG~~  276 (278)
T 3sx2_A          207 GVETPMINNEFTREWLAKMAAATDTPGAMGNAMPVEVLAPEDVANAVAWLVS-DQARYITGVTLPVDAGFL  276 (278)
T ss_dssp             CBSSTTTSSHHHHHHHHHHHHHCC--CTTSCSSSCSSBCHHHHHHHHHHHTS-GGGTTCCSCEEEESTTTT
T ss_pred             CccCccchhhhHHHHHhhccchhhhhhhhhhhcCcCcCCHHHHHHHHHHHhC-cccccccCCEEeECCCcc
Confidence            9999997531                         23479999999999987 677889999999999864

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=100.00  E-value=6.6e-41  Score=298.71  Aligned_cols=227  Identities=26%  Similarity=0.304  Sum_probs=203.9

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++   +.++.++.+|++|+++++++++++.+.+|
T Consensus         3 ~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   79 (247)
T 3rwb_A            3 RLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI---GKKARAIAADISDPGSVKALFAEIQALTG   79 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH---CTTEEECCCCTTCHHHHHHHHHHHHHHHS
T ss_pred             CcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHHHCC
Confidence            578999999999999999999999999999999999999988888777   45789999999999999999999999999


Q ss_pred             CccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccch
Q 022103          107 ALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILED  185 (302)
Q Consensus       107 ~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~  185 (302)
                      ++|+||||||.... ++.+.+.++|++++++|+.++++++++++|.|.+++..++||++||..+..+.+           
T Consensus        80 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------  148 (247)
T 3rwb_A           80 GIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTP-----------  148 (247)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTCT-----------
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCCC-----------
Confidence            99999999998754 578899999999999999999999999999998874479999999988775532           


Q ss_pred             hhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC---
Q 022103          186 EELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ---  262 (302)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~---  262 (302)
                                                     ++.+|++||+|+++|+++++.|++++||+||+|+||+|+|++....   
T Consensus       149 -------------------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~  197 (247)
T 3rwb_A          149 -------------------------------NMAAYVAAKGGVIGFTRALATELGKYNITANAVTPGLIESDGVKASPHN  197 (247)
T ss_dssp             -------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSGGG
T ss_pred             -------------------------------CchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCccccccChh
Confidence                                           2478999999999999999999999999999999999999875432   


Q ss_pred             -------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcccC
Q 022103          263 -------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVK  299 (302)
Q Consensus       263 -------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  299 (302)
                                   +..+|+++|..+.+|++ +...+++|+++..+|+...
T Consensus       198 ~~~~~~~~~~~~~r~~~pedva~~v~~L~s-~~~~~itG~~i~vdGG~~~  246 (247)
T 3rwb_A          198 EAFGFVEMLQAMKGKGQPEHIADVVSFLAS-DDARWITGQTLNVDAGMVR  246 (247)
T ss_dssp             GGHHHHHHHSSSCSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTSSC
T ss_pred             HHHHHHhcccccCCCcCHHHHHHHHHHHhC-ccccCCCCCEEEECCCccC
Confidence                         23579999999999997 6778899999999998653

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=100.00  E-value=6.7e-41  Score=303.97  Aligned_cols=231  Identities=29%  Similarity=0.333  Sum_probs=203.1

Q ss_pred             ccccccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHH
Q 022103           22 SSTKWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWF  101 (302)
Q Consensus        22 ~~~~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~  101 (302)
                      ++...++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++   +.++.++.+|++|+++++++++++
T Consensus        21 sm~~~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~   97 (277)
T 3gvc_A           21 SMNHPDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI---GCGAAACRVDVSDEQQIIAMVDAC   97 (277)
T ss_dssp             ------CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH---CSSCEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---CCcceEEEecCCCHHHHHHHHHHH
Confidence            34456789999999999999999999999999999999999999888888777   457899999999999999999999


Q ss_pred             HhhCCCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccc
Q 022103          102 KSNFAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIK  180 (302)
Q Consensus       102 ~~~~g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~  180 (302)
                      .+.++++|+||||||.... ++.+.+.++|++++++|+.++++++++++|.|.++ +.++||++||..+..+.+      
T Consensus        98 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~Iv~isS~~~~~~~~------  170 (277)
T 3gvc_A           98 VAAFGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIER-GGGAIVNLSSLAGQVAVG------  170 (277)
T ss_dssp             HHHHSSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCEEEEEECCGGGTSCCT------
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEEcchhhccCCC------
Confidence            9999999999999998754 67889999999999999999999999999999887 579999999998875532      


Q ss_pred             cccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCC
Q 022103          181 SILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ  260 (302)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~  260 (302)
                                                          ++.+|++||+|++.|+++++.|++++||+||+|+||+|+|+|.+
T Consensus       171 ------------------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~  214 (277)
T 3gvc_A          171 ------------------------------------GTGAYGMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQ  214 (277)
T ss_dssp             ------------------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH
T ss_pred             ------------------------------------CchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCchHH
Confidence                                                24789999999999999999999999999999999999998742


Q ss_pred             C----------------------CCCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcccC
Q 022103          261 G----------------------QGSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVK  299 (302)
Q Consensus       261 ~----------------------~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  299 (302)
                      .                      .+..+|+|+|..+++|++ +...+++|+.+..+|+...
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~~L~s-~~a~~itG~~i~vdGG~~~  274 (277)
T 3gvc_A          215 TAMAMFDGALGAGGARSMIARLQGRMAAPEEMAGIVVFLLS-DDASMITGTTQIADGGTIA  274 (277)
T ss_dssp             HHHTCC------CCHHHHHHHHHSSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGGG
T ss_pred             HhhhcchhhHHHHhhhhhhhccccCCCCHHHHHHHHHHHcC-CccCCccCcEEEECCcchh
Confidence            1                      023689999999999997 6778899999999998654

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=100.00  E-value=5.3e-41  Score=307.14  Aligned_cols=231  Identities=25%  Similarity=0.250  Sum_probs=207.5

Q ss_pred             cccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCC-CceeEEEeeCCCHHHHHHHHHHHHh
Q 022103           25 KWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKG-LPVNFFQLDVSDPSSIEAFVSWFKS  103 (302)
Q Consensus        25 ~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dlt~~~~~~~~~~~~~~  103 (302)
                      .+++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.+ .++.++.+|++|+++++++++++.+
T Consensus        36 m~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  115 (293)
T 3rih_A           36 MFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVD  115 (293)
T ss_dssp             TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHH
Confidence            356899999999999999999999999999999999999999999999998776 6889999999999999999999999


Q ss_pred             hCCCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcc-cccccCccccc
Q 022103          104 NFAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGT-LSKVRNPNIKS  181 (302)
Q Consensus       104 ~~g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~-~~~~~~~~~~~  181 (302)
                      +++++|+||||||.... ++.+.+.++|++++++|+.++++++++++|.|.++ +.++||++||..+. .+.        
T Consensus       116 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~iV~isS~~~~~~~~--------  186 (293)
T 3rih_A          116 AFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTAS-GRGRVILTSSITGPVTGY--------  186 (293)
T ss_dssp             HHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHH-SSCEEEEECCSBTTTBBC--------
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCCEEEEEeChhhccCCC--------
Confidence            99999999999998754 67889999999999999999999999999999887 57999999998875 332        


Q ss_pred             ccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCC
Q 022103          182 ILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG  261 (302)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~  261 (302)
                                                        +++.+|++||++++.|+++|+.|++++||+||+|+||+|+|++...
T Consensus       187 ----------------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~  232 (293)
T 3rih_A          187 ----------------------------------PGWSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVD  232 (293)
T ss_dssp             ----------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHH
T ss_pred             ----------------------------------CCCHHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhh
Confidence                                              2247899999999999999999999999999999999999987533


Q ss_pred             C---------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcccC
Q 022103          262 Q---------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVK  299 (302)
Q Consensus       262 ~---------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  299 (302)
                      .               ...+|+++|..+++|++ +...+++|+++..+|+...
T Consensus       233 ~~~~~~~~~~~~~p~~r~~~p~dvA~~v~fL~s-~~a~~itG~~i~vdGG~~~  284 (293)
T 3rih_A          233 MGEEYISGMARSIPMGMLGSPVDIGHLAAFLAT-DEAGYITGQAIVVDGGQVL  284 (293)
T ss_dssp             TCHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTTTC
T ss_pred             ccHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhC-ccccCCCCCEEEECCCccC
Confidence            2               23589999999999997 6778899999999998654

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=100.00  E-value=1.1e-40  Score=296.77  Aligned_cols=227  Identities=27%  Similarity=0.355  Sum_probs=203.8

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEec-ChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTAR-DVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r-~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      +.+|+++||||++|||+++|++|+++|++|++++| +.++++...+++.+.+.++.++.+|++|.++++++++++.++++
T Consensus         2 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   81 (246)
T 3osu_A            2 KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFG   81 (246)
T ss_dssp             CCSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            45799999999999999999999999999998877 55778888888888888899999999999999999999999999


Q ss_pred             CccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccch
Q 022103          107 ALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILED  185 (302)
Q Consensus       107 ~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~  185 (302)
                      ++|+||||||.... ++.+.+.++|++++++|+.++++++++++|.|.++ +.++||++||..+..+.+           
T Consensus        82 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~~-----------  149 (246)
T 3osu_A           82 SLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQ-RSGAIINLSSVVGAVGNP-----------  149 (246)
T ss_dssp             CCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCHHHHHCCT-----------
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCCEEEEEcchhhcCCCC-----------
Confidence            99999999998754 57889999999999999999999999999999876 579999999988775532           


Q ss_pred             hhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC---
Q 022103          186 EELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ---  262 (302)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~---  262 (302)
                                                     ++.+|++||+|+++|+++++.|++++||+||+|+||+++|+|.+..   
T Consensus       150 -------------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~  198 (246)
T 3osu_A          150 -------------------------------GQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSDE  198 (246)
T ss_dssp             -------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCSCHH
T ss_pred             -------------------------------CChHHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCcccccCHH
Confidence                                           2478999999999999999999999999999999999999997653   


Q ss_pred             ------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          263 ------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       263 ------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                                  ...+|+++|+.+++|++ ++..+++|+++..+|+..
T Consensus       199 ~~~~~~~~~p~~r~~~~~dva~~v~~l~s-~~~~~itG~~i~vdgG~~  245 (246)
T 3osu_A          199 LKEQMLTQIPLARFGQDTDIANTVAFLAS-DKAKYITGQTIHVNGGMY  245 (246)
T ss_dssp             HHHHHHTTCTTCSCBCHHHHHHHHHHHTS-GGGTTCCSCEEEESTTSC
T ss_pred             HHHHHHhcCCCCCCcCHHHHHHHHHHHhC-ccccCCCCCEEEeCCCcc
Confidence                        12579999999999987 677889999999998753

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=100.00  E-value=2.6e-40  Score=299.97  Aligned_cols=229  Identities=24%  Similarity=0.292  Sum_probs=203.7

Q ss_pred             ccccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHh
Q 022103           24 TKWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKS  103 (302)
Q Consensus        24 ~~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~  103 (302)
                      .++++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++   +.++.++.+|++|+++++++++++.+
T Consensus        21 ~~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~   97 (277)
T 4dqx_A           21 QSMDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEI---GSKAFGVRVDVSSAKDAESMVEKTTA   97 (277)
T ss_dssp             -CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHH
Confidence            346789999999999999999999999999999999999998888877775   45789999999999999999999999


Q ss_pred             hCCCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccc
Q 022103          104 NFAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSI  182 (302)
Q Consensus       104 ~~g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~  182 (302)
                      .+|++|+||||||.... ++.+.+.++|++++++|+.|+++++++++|.|.++ +.++||++||..+..+.+        
T Consensus        98 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~~--------  168 (277)
T 4dqx_A           98 KWGRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRN-GGGSIINTTSYTATSAIA--------  168 (277)
T ss_dssp             HHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT-TCEEEEEECCGGGTSCCT--------
T ss_pred             HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCcEEEEECchhhCcCCC--------
Confidence            99999999999998754 57889999999999999999999999999999877 578999999988875532        


Q ss_pred             cchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCC-
Q 022103          183 LEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG-  261 (302)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~-  261 (302)
                                                        ++.+|++||+|+++|+++|+.|++++||+||+|+||+|+|+|... 
T Consensus       169 ----------------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~  214 (277)
T 4dqx_A          169 ----------------------------------DRTAYVASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKI  214 (277)
T ss_dssp             ----------------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHH
T ss_pred             ----------------------------------CChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhhhh
Confidence                                              247899999999999999999999999999999999999998211 


Q ss_pred             --------------------CCCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcccC
Q 022103          262 --------------------QGSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVK  299 (302)
Q Consensus       262 --------------------~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  299 (302)
                                          .+..+|+++|..+++|++ +...+++|+++..+|+...
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~~L~s-~~~~~itG~~i~vdGG~~~  271 (277)
T 4dqx_A          215 FAEAKDPAKLRSDFNARAVMDRMGTAEEIAEAMLFLAS-DRSRFATGSILTVDGGSSI  271 (277)
T ss_dssp             HHTCSCHHHHHHHHHTTSTTCSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESSSSSS
T ss_pred             cccccchhHHHHHHHhcCcccCCcCHHHHHHHHHHHhC-CccCCCcCCEEEECCchhh
Confidence                                123579999999999997 6778899999999998654

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=100.00  E-value=1.1e-40  Score=302.30  Aligned_cols=231  Identities=19%  Similarity=0.220  Sum_probs=206.4

Q ss_pred             cccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCC---ceeEEEeeCCCHHHHHHHHHHH
Q 022103           25 KWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGL---PVNFFQLDVSDPSSIEAFVSWF  101 (302)
Q Consensus        25 ~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~---~~~~~~~Dlt~~~~~~~~~~~~  101 (302)
                      .+++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.+.   ++.++.+|++|+++++++++++
T Consensus         6 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   85 (281)
T 3svt_A            6 QLSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAV   85 (281)
T ss_dssp             --CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHH
T ss_pred             ccCcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHH
Confidence            4578899999999999999999999999999999999999999999999987655   7889999999999999999999


Q ss_pred             HhhCCCccEEEEcCCCCC--CCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCccc
Q 022103          102 KSNFAALDILVNNAGVSF--NDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNI  179 (302)
Q Consensus       102 ~~~~g~id~lv~~aG~~~--~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~  179 (302)
                      .+++|++|+||||||...  .++.+.+.++|++++++|+.++++++++++|.|.++ +.++||++||..+..+.+     
T Consensus        86 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~~-----  159 (281)
T 3svt_A           86 TAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRG-GGGSFVGISSIAASNTHR-----  159 (281)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCEEEEEECCHHHHSCCT-----
T ss_pred             HHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEEeCHHHcCCCC-----
Confidence            999999999999999743  257889999999999999999999999999999887 578999999988765432     


Q ss_pred             ccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCC
Q 022103          180 KSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMT  259 (302)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~  259 (302)
                                                           ++.+|++||++++.|+++++.|++++||+||+|+||+|+|+|.
T Consensus       160 -------------------------------------~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~  202 (281)
T 3svt_A          160 -------------------------------------WFGAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLV  202 (281)
T ss_dssp             -------------------------------------TCTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGG
T ss_pred             -------------------------------------CChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcch
Confidence                                                 2478999999999999999999999999999999999999986


Q ss_pred             CCC-----------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcccC
Q 022103          260 QGQ-----------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVK  299 (302)
Q Consensus       260 ~~~-----------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  299 (302)
                      +..                 ...+|+++|..+++|++ +...+++|+++..+|+...
T Consensus       203 ~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~~l~s-~~~~~itG~~~~vdgG~~~  258 (281)
T 3svt_A          203 AAITESAELSSDYAMCTPLPRQGEVEDVANMAMFLLS-DAASFVTGQVINVDGGQML  258 (281)
T ss_dssp             HHHHTCHHHHHHHHHHCSSSSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGGG
T ss_pred             hhcccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhC-cccCCCCCCEEEeCCChhc
Confidence            531                 23579999999999997 6777899999999998654

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=100.00  E-value=9.1e-41  Score=303.07  Aligned_cols=228  Identities=28%  Similarity=0.333  Sum_probs=202.8

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      -+++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.+.++.++.+|++|+++++++++++.+++|
T Consensus        21 m~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  100 (279)
T 3sju_A           21 MSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFG  100 (279)
T ss_dssp             ----CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            36789999999999999999999999999999999999999999999988888999999999999999999999999999


Q ss_pred             CccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhh--hhhcCCCCCcEEEecCCCcccccccCccccccc
Q 022103          107 ALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLP--LFRRSPSKSRILNISSRLGTLSKVRNPNIKSIL  183 (302)
Q Consensus       107 ~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~--~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~  183 (302)
                      ++|+||||||.... ++.+.+.++|++++++|+.++++++++++|  .|.++ +.++||++||..+..+.+.        
T Consensus       101 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~-~~g~iV~isS~~~~~~~~~--------  171 (279)
T 3sju_A          101 PIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREA-GWGRIVNIASTGGKQGVMY--------  171 (279)
T ss_dssp             SCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHH-TCEEEEEECCGGGTSCCTT--------
T ss_pred             CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhc-CCcEEEEECChhhccCCCC--------
Confidence            99999999998754 578899999999999999999999999999  57665 5699999999988755332        


Q ss_pred             chhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCC--
Q 022103          184 EDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG--  261 (302)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~--  261 (302)
                                                        +.+|++||+|+++|+++|+.|++++||+||+|+||+|+|+|...  
T Consensus       172 ----------------------------------~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~  217 (279)
T 3sju_A          172 ----------------------------------AAPYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVR  217 (279)
T ss_dssp             ----------------------------------CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHH
T ss_pred             ----------------------------------ChhHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHH
Confidence                                              47899999999999999999999999999999999999987432  


Q ss_pred             ------------------------CCCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          262 ------------------------QGSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       262 ------------------------~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                                              .+..+|+++|..+++|++ +...+++|+.+..+|+..
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s-~~a~~itG~~i~vdGG~~  277 (279)
T 3sju_A          218 EGYARHWGVTEQEVHERFNAKIPLGRYSTPEEVAGLVGYLVT-DAAASITAQALNVCGGLG  277 (279)
T ss_dssp             HSCCSSSCCCHHHHHHHHHTTCTTSSCBCHHHHHHHHHHHTS-SGGGGCCSCEEEESTTCC
T ss_pred             hhhhhcccCChHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhC-ccccCcCCcEEEECCCcc
Confidence                                    123689999999999987 677889999999999853

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=100.00  E-value=8.3e-41  Score=302.65  Aligned_cols=230  Identities=22%  Similarity=0.264  Sum_probs=202.4

Q ss_pred             ccccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHh
Q 022103           24 TKWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKS  103 (302)
Q Consensus        24 ~~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~  103 (302)
                      ..+++++|++|||||++|||+++|++|+++|++|++++|+ +++++..+++.+.+.++.++.+|++|.++++++.+.+ +
T Consensus        25 ~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~-~  102 (273)
T 3uf0_A           25 GPFSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT-DGVKEVADEIADGGGSAEAVVADLADLEGAANVAEEL-A  102 (273)
T ss_dssp             CTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-THHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHH-H
T ss_pred             cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCH-HHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHH-H
Confidence            3567999999999999999999999999999999999976 5667777888777788999999999999999995555 4


Q ss_pred             hCCCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccc
Q 022103          104 NFAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSI  182 (302)
Q Consensus       104 ~~g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~  182 (302)
                      +++++|+||||||+... ++.+.+.++|++++++|+.++++++++++|.|.++ +.++||++||..+..+.+        
T Consensus       103 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~IV~isS~~~~~~~~--------  173 (273)
T 3uf0_A          103 ATRRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAH-GSGRIVTIASMLSFQGGR--------  173 (273)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTSCCS--------
T ss_pred             hcCCCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCEEEEEcchHhcCCCC--------
Confidence            56899999999998754 67889999999999999999999999999999877 579999999998875533        


Q ss_pred             cchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC
Q 022103          183 LEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ  262 (302)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~  262 (302)
                                                        ++.+|++||+|++.|+++|+.|++++||+||+|+||+|+|++....
T Consensus       174 ----------------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~  219 (273)
T 3uf0_A          174 ----------------------------------NVAAYAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAAL  219 (273)
T ss_dssp             ----------------------------------SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHH
T ss_pred             ----------------------------------CChhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhc
Confidence                                              2478999999999999999999999999999999999999986432


Q ss_pred             -----------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcccC
Q 022103          263 -----------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVK  299 (302)
Q Consensus       263 -----------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  299 (302)
                                       +..+|+++|..+++|+. +...+++|+++..+|+...
T Consensus       220 ~~~~~~~~~~~~~~p~~r~~~pedva~~v~~L~s-~~a~~itG~~i~vdGG~~~  272 (273)
T 3uf0_A          220 RADDERAAEITARIPAGRWATPEDMVGPAVFLAS-DAASYVHGQVLAVDGGWLA  272 (273)
T ss_dssp             HTSHHHHHHHHHHSTTSSCBCGGGGHHHHHHHHS-GGGTTCCSCEEEESTTGGG
T ss_pred             ccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhC-chhcCCcCCEEEECcCccC
Confidence                             23689999999999997 6778899999999998653

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=100.00  E-value=3.2e-40  Score=293.16  Aligned_cols=228  Identities=28%  Similarity=0.347  Sum_probs=207.8

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.+.++.++.+|++|+++++++++++.+.++
T Consensus         2 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (247)
T 3lyl_A            2 SLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENL   81 (247)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTC
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            57899999999999999999999999999999999999999999999988888999999999999999999999999999


Q ss_pred             CccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccch
Q 022103          107 ALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILED  185 (302)
Q Consensus       107 ~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~  185 (302)
                      ++|+||||||.... .+.+.+.++|+.++++|+.+++++++.++|.|.++ ..++||++||..+..+.+           
T Consensus        82 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~~~~-----------  149 (247)
T 3lyl_A           82 AIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKK-RWGRIISIGSVVGSAGNP-----------  149 (247)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCTHHHHCCT-----------
T ss_pred             CCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCeEEEEEcchhhccCCC-----------
Confidence            99999999998754 56788999999999999999999999999999876 568999999998875532           


Q ss_pred             hhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCCC--
Q 022103          186 EELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQG--  263 (302)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~~--  263 (302)
                                                     ++..|++||+|++.|+++++.|++++||+|++|+||+++|+|.+...  
T Consensus       150 -------------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~  198 (247)
T 3lyl_A          150 -------------------------------GQTNYCAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDKLTDE  198 (247)
T ss_dssp             -------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTSCHH
T ss_pred             -------------------------------CcHHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchhccHH
Confidence                                           24789999999999999999999999999999999999999977542  


Q ss_pred             -------------CCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          264 -------------SHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       264 -------------~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                                   ..+|+++|..+.+|+. +...+++|+++..+|+..
T Consensus       199 ~~~~~~~~~~~~~~~~~~dva~~i~~l~s-~~~~~~tG~~i~vdgG~~  245 (247)
T 3lyl_A          199 QKSFIATKIPSGQIGEPKDIAAAVAFLAS-EEAKYITGQTLHVNGGMY  245 (247)
T ss_dssp             HHHHHHTTSTTCCCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTSS
T ss_pred             HHHHHhhcCCCCCCcCHHHHHHHHHHHhC-CCcCCccCCEEEECCCEe
Confidence                         3589999999999987 577889999999999864

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=100.00  E-value=3.6e-40  Score=297.76  Aligned_cols=224  Identities=25%  Similarity=0.282  Sum_probs=202.2

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      .++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++   +.++.++.+|++|+++++++++++.+++
T Consensus         7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   83 (271)
T 3tzq_B            7 AELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV---GRGAVHHVVDLTNEVSVRALIDFTIDTF   83 (271)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHH---CTTCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh---CCCeEEEECCCCCHHHHHHHHHHHHHHc
Confidence            4688999999999999999999999999999999999999988888777   4578999999999999999999999999


Q ss_pred             CCccEEEEcCCCCCC---CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccc
Q 022103          106 AALDILVNNAGVSFN---DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSI  182 (302)
Q Consensus       106 g~id~lv~~aG~~~~---~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~  182 (302)
                      |++|+||||||....   .+.+.+.++|++++++|+.++++++++++|.|.++ +.++||++||..+..+.+        
T Consensus        84 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~iv~isS~~~~~~~~--------  154 (271)
T 3tzq_B           84 GRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISA-GGGAIVNISSATAHAAYD--------  154 (271)
T ss_dssp             SCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCEEEEEECCGGGTSBCS--------
T ss_pred             CCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCEEEEECCHHHcCCCC--------
Confidence            999999999998632   46788999999999999999999999999999887 579999999998875532        


Q ss_pred             cchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC
Q 022103          183 LEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ  262 (302)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~  262 (302)
                                                        ++.+|++||+|+++|+++++.|++++||+||+|+||+|+|++....
T Consensus       155 ----------------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~  200 (271)
T 3tzq_B          155 ----------------------------------MSTAYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVG  200 (271)
T ss_dssp             ----------------------------------SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC--
T ss_pred             ----------------------------------CChHHHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCcccccc
Confidence                                              2478999999999999999999999999999999999999997621


Q ss_pred             ----------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCc
Q 022103          263 ----------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDP  296 (302)
Q Consensus       263 ----------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  296 (302)
                                      +..+|+++|..+++|++ +...+++|+++..+|+
T Consensus       201 ~~~~~~~~~~~~~~~~r~~~p~dvA~~v~~L~s-~~~~~itG~~i~vdGG  249 (271)
T 3tzq_B          201 LPQPIVDIFATHHLAGRIGEPHEIAELVCFLAS-DRAAFITGQVIAADSG  249 (271)
T ss_dssp             -CHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTT
T ss_pred             CCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC-cccCCcCCCEEEECCC
Confidence                            22589999999999997 6778899999999998

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=100.00  E-value=1.8e-40  Score=297.50  Aligned_cols=228  Identities=23%  Similarity=0.246  Sum_probs=203.8

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      ..+++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++   +.++.++.+|++|+++++++++++.+++
T Consensus         4 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~   80 (259)
T 4e6p_A            4 KRLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI---GPAAYAVQMDVTRQDSIDAAIAATVEHA   80 (259)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred             ccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCCceEEEeeCCCHHHHHHHHHHHHHHc
Confidence            4578999999999999999999999999999999999999988888877   3478999999999999999999999999


Q ss_pred             CCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccc
Q 022103          106 AALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILE  184 (302)
Q Consensus       106 g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~  184 (302)
                      |++|+||||||.... ++.+.+.++|++++++|+.++++++++++|.|.+++..++||++||..+..+.+          
T Consensus        81 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------  150 (259)
T 4e6p_A           81 GGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGEA----------  150 (259)
T ss_dssp             SSCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCT----------
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCCC----------
Confidence            999999999998754 678899999999999999999999999999998764478999999998875532          


Q ss_pred             hhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC--
Q 022103          185 DEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ--  262 (302)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~--  262 (302)
                                                      ++..|++||++++.|+++++.|++++||+||+|+||+|+|++....  
T Consensus       151 --------------------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~  198 (259)
T 4e6p_A          151 --------------------------------LVAIYCATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDGVDA  198 (259)
T ss_dssp             --------------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHHHHHH
T ss_pred             --------------------------------CChHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhhhhhh
Confidence                                            2478999999999999999999999999999999999999975321  


Q ss_pred             ------------------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcccC
Q 022103          263 ------------------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVK  299 (302)
Q Consensus       263 ------------------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  299 (302)
                                              +..+|+|+|..+++|++ +...+++|+.+..+|+...
T Consensus       199 ~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~L~s-~~~~~itG~~i~vdgG~~~  258 (259)
T 4e6p_A          199 LFARYENRPRGEKKRLVGEAVPFGRMGTAEDLTGMAIFLAS-AESDYIVSQTYNVDGGNWM  258 (259)
T ss_dssp             HHHHHHTCCTTHHHHHHHHHSTTSSCBCTHHHHHHHHHTTS-GGGTTCCSCEEEESTTSSC
T ss_pred             hhhhhccCChHHHHHHHhccCCCCCCcCHHHHHHHHHHHhC-CccCCCCCCEEEECcChhc
Confidence                                    23689999999999987 6778899999999998653

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=100.00  E-value=2e-40  Score=299.18  Aligned_cols=227  Identities=28%  Similarity=0.322  Sum_probs=195.6

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEE-ecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhh
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILT-ARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSN  104 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~-~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~  104 (302)
                      +.+++|++|||||++|||+++|++|+++|++|+++ .|+.+.++...+++...+.++.++.+|++|+++++++++++.+.
T Consensus        23 m~~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  102 (267)
T 3u5t_A           23 MMETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEA  102 (267)
T ss_dssp             ----CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            44689999999999999999999999999999987 55667788888888888888999999999999999999999999


Q ss_pred             CCCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCccccccc
Q 022103          105 FAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSIL  183 (302)
Q Consensus       105 ~g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~  183 (302)
                      ++++|+||||||+... ++.+.+.++|++++++|+.++++++++++|.|++   .++||++||..+..+.+         
T Consensus       103 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~---~g~iv~isS~~~~~~~~---------  170 (267)
T 3u5t_A          103 FGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRV---GGRIINMSTSQVGLLHP---------  170 (267)
T ss_dssp             HSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEECCTHHHHCCT---------
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh---CCeEEEEeChhhccCCC---------
Confidence            9999999999998754 6788999999999999999999999999999965   38999999988765432         


Q ss_pred             chhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC-
Q 022103          184 EDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ-  262 (302)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~-  262 (302)
                                                       ++.+|++||+|+++|+++|+.|++++||+||+|+||+|+|+|.... 
T Consensus       171 ---------------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~  217 (267)
T 3u5t_A          171 ---------------------------------SYGIYAAAKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLEGK  217 (267)
T ss_dssp             ---------------------------------TCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC--------
T ss_pred             ---------------------------------CchHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCccccccC
Confidence                                             2478999999999999999999999999999999999999996531 


Q ss_pred             ---------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          263 ---------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       263 ---------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                                     +..+|+++|..+++|++ +...+++|+++..+|+.+
T Consensus       218 ~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s-~~~~~itG~~i~vdGG~~  267 (267)
T 3u5t_A          218 SDEVRDRFAKLAPLERLGTPQDIAGAVAFLAG-PDGAWVNGQVLRANGGII  267 (267)
T ss_dssp             ---CHHHHHTSSTTCSCBCHHHHHHHHHHHHS-TTTTTCCSEEEEESSSCC
T ss_pred             CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC-ccccCccCCEEEeCCCcC
Confidence                           22579999999999997 778889999999999753

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=2.1e-40  Score=306.06  Aligned_cols=231  Identities=24%  Similarity=0.250  Sum_probs=206.4

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecC------------hhhHHHHHHHHhhCCCceeEEEeeCCCHHH
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARD------------VERGQRAVESLSEKGLPVNFFQLDVSDPSS   93 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~------------~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~   93 (302)
                      .++++|++|||||++|||+++|+.|+++|++|++++|+            .+++++..+++.+.+.++.++.+|++|+++
T Consensus        42 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~  121 (317)
T 3oec_A           42 NRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLAS  121 (317)
T ss_dssp             CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH
T ss_pred             hccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHH
Confidence            35889999999999999999999999999999999886            677888888888888899999999999999


Q ss_pred             HHHHHHHHHhhCCCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccc
Q 022103           94 IEAFVSWFKSNFAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLS  172 (302)
Q Consensus        94 ~~~~~~~~~~~~g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~  172 (302)
                      ++++++++.+.+|++|+||||||+... ++.+.+.++|++++++|+.++++++++++|.|.+++..++||++||..+..+
T Consensus       122 v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~~~  201 (317)
T 3oec_A          122 LQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRG  201 (317)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGSSC
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhcCC
Confidence            999999999999999999999998755 5788999999999999999999999999999988755789999999988755


Q ss_pred             cccCcccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecC
Q 022103          173 KVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPG  252 (302)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG  252 (302)
                      .+                                          ++..|++||+|++.|+++|+.|++++||+||+|+||
T Consensus       202 ~~------------------------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG  239 (317)
T 3oec_A          202 AP------------------------------------------GQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPG  239 (317)
T ss_dssp             CT------------------------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred             CC------------------------------------------CCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecC
Confidence            32                                          247899999999999999999999999999999999


Q ss_pred             cccCCCCCC------------------------------CCCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcccC
Q 022103          253 FTQTSMTQG------------------------------QGSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVK  299 (302)
Q Consensus       253 ~v~T~~~~~------------------------------~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  299 (302)
                      +|+|+|...                              .+..+|+++|..+++|++ +...+++|+.+..+|+...
T Consensus       240 ~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~pedvA~av~fL~s-~~a~~itG~~i~vdGG~~~  315 (317)
T 3oec_A          240 AVNTEMALNEKLLKMFLPHLENPTREDAAELFSQLTLLPIPWVEPEDVSNAVAWLAS-DEARYIHGAAIPVDGGQLA  315 (317)
T ss_dssp             SBSSHHHHCHHHHHHHCTTCSSCCHHHHHHHHTTTCSSSSSSBCHHHHHHHHHHHTS-GGGTTCCSCEEEESTTGGG
T ss_pred             cccCccccchhhhhhhhhhccccchhHHHHHHhhhccCCCCCCCHHHHHHHHHHHcC-CcccCCCCCEEEECcchhh
Confidence            999987421                              122479999999999997 6778899999999998653

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.6e-40  Score=300.38  Aligned_cols=231  Identities=28%  Similarity=0.382  Sum_probs=195.7

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEec-ChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTAR-DVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r-~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      ++++|++|||||++|||+++|++|+++|++|++++| +.++++...+++...+.++.++.+|++|+++++++++++.+++
T Consensus        26 ~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  105 (280)
T 4da9_A           26 QKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEF  105 (280)
T ss_dssp             CCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHH
T ss_pred             ccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            578999999999999999999999999999999995 7778888888888888899999999999999999999999999


Q ss_pred             CCccEEEEcCCCC--C-CCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCC--CCCcEEEecCCCcccccccCcccc
Q 022103          106 AALDILVNNAGVS--F-NDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSP--SKSRILNISSRLGTLSKVRNPNIK  180 (302)
Q Consensus       106 g~id~lv~~aG~~--~-~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~--~~~~iv~vsS~~~~~~~~~~~~~~  180 (302)
                      +++|+||||||..  . .++.+.+.++|++++++|+.++++++++++|.|.+++  ..++||++||..+..+.+.     
T Consensus       106 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~-----  180 (280)
T 4da9_A          106 GRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTSPE-----  180 (280)
T ss_dssp             SCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC-------C-----
T ss_pred             CCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccCCCC-----
Confidence            9999999999983  2 3678899999999999999999999999999998752  2689999999988755332     


Q ss_pred             cccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCC
Q 022103          181 SILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ  260 (302)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~  260 (302)
                                                           +.+|++||+|+++|+++|+.|++++||+||+|+||+|+|+|..
T Consensus       181 -------------------------------------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~  223 (280)
T 4da9_A          181 -------------------------------------RLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTA  223 (280)
T ss_dssp             -------------------------------------CHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC----
T ss_pred             -------------------------------------ccHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchh
Confidence                                                 3779999999999999999999999999999999999999976


Q ss_pred             CC----------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcccCC
Q 022103          261 GQ----------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVKS  300 (302)
Q Consensus       261 ~~----------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~  300 (302)
                      ..                +..+|+++|..+++|++ +...+++|+++..+|+....
T Consensus       224 ~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s-~~~~~itG~~i~vdGG~~~~  278 (280)
T 4da9_A          224 AVSGKYDGLIESGLVPMRRWGEPEDIGNIVAGLAG-GQFGFATGSVIQADGGLSIG  278 (280)
T ss_dssp             ------------------CCBCHHHHHHHHHHHHT-STTGGGTTCEEEESTTCC--
T ss_pred             hcchhHHHHHhhcCCCcCCcCCHHHHHHHHHHHhC-ccccCCCCCEEEECCCcccC
Confidence            43                12479999999999997 67788999999999987654

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=100.00  E-value=4.3e-40  Score=299.02  Aligned_cols=229  Identities=24%  Similarity=0.343  Sum_probs=200.8

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEec-ChhhHHHHHHHHhhC-CCceeEEEeeCCCHHHHHHHHHHHHh
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTAR-DVERGQRAVESLSEK-GLPVNFFQLDVSDPSSIEAFVSWFKS  103 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r-~~~~~~~~~~~l~~~-~~~~~~~~~Dlt~~~~~~~~~~~~~~  103 (302)
                      .++.+|++|||||++|||+++|++|+++|++|++++| +.++++...+++.+. +.++.++.+|++|+++++++++++.+
T Consensus        21 ~~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  100 (281)
T 3v2h_A           21 QSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVAD  100 (281)
T ss_dssp             -CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHH
T ss_pred             hccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHH
Confidence            4678999999999999999999999999999999999 667778888888765 56889999999999999999999999


Q ss_pred             hCCCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccc
Q 022103          104 NFAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSI  182 (302)
Q Consensus       104 ~~g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~  182 (302)
                      ++|++|+||||||.... ++.+.+.++|++++++|+.++++++++++|.|.++ +.++||++||..+..+.+.       
T Consensus       101 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~~~~~-------  172 (281)
T 3v2h_A          101 RFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKK-GWGRIINIASAHGLVASPF-------  172 (281)
T ss_dssp             HTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTSCCTT-------
T ss_pred             HCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCCEEEEECCcccccCCCC-------
Confidence            99999999999998754 57788999999999999999999999999999887 5799999999988755332       


Q ss_pred             cchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC
Q 022103          183 LEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ  262 (302)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~  262 (302)
                                                         +.+|++||+|+++|+++|+.|++++||+||+|+||+|+|+|....
T Consensus       173 -----------------------------------~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~  217 (281)
T 3v2h_A          173 -----------------------------------KSAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQ  217 (281)
T ss_dssp             -----------------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC------
T ss_pred             -----------------------------------chHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhh
Confidence                                               478999999999999999999999999999999999999986431


Q ss_pred             ---------------------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          263 ---------------------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       263 ---------------------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                                                 +..+|+++|..+++|++ +...+++|+++..+|++.
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~edvA~~v~~L~s-~~a~~itG~~i~vdGG~~  279 (281)
T 3v2h_A          218 IPDQARTRGITEEQVINEVMLKGQPTKKFITVEQVASLALYLAG-DDAAQITGTHVSMDGGWT  279 (281)
T ss_dssp             ----------------------CCTTCSCBCHHHHHHHHHHHHS-SGGGGCCSCEEEESTTGG
T ss_pred             cchhhhhcCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHcC-CCcCCCCCcEEEECCCcc
Confidence                                       12579999999999997 677889999999999864

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=100.00  E-value=9.8e-41  Score=301.08  Aligned_cols=227  Identities=26%  Similarity=0.319  Sum_probs=196.6

Q ss_pred             cccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhh
Q 022103           25 KWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSN  104 (302)
Q Consensus        25 ~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~  104 (302)
                      .+++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++   +.++.++.+|++|+++++++++++.+.
T Consensus        22 m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~   98 (266)
T 3grp_A           22 MFKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADL---GKDVFVFSANLSDRKSIKQLAEVAERE   98 (266)
T ss_dssp             TTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CSSEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             hhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceEEEEeecCCHHHHHHHHHHHHHH
Confidence            35689999999999999999999999999999999999998888877665   457899999999999999999999999


Q ss_pred             CCCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCccccccc
Q 022103          105 FAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSIL  183 (302)
Q Consensus       105 ~g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~  183 (302)
                      ++++|+||||||.... ++.+.+.++|++++++|+.++++++++++|.|.++ +.++||++||..+..+.+         
T Consensus        99 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~Iv~isS~~~~~~~~---------  168 (266)
T 3grp_A           99 MEGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRR-RYGRIINITSIVGVVGNP---------  168 (266)
T ss_dssp             HTSCCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCC----------------
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCcEEEEECCHHHcCCCC---------
Confidence            9999999999998754 57888999999999999999999999999999876 579999999998875532         


Q ss_pred             chhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC-
Q 022103          184 EDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ-  262 (302)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~-  262 (302)
                                                       ++.+|++||+|+++|+++++.|++++||+||+|+||+|+|+|.... 
T Consensus       169 ---------------------------------~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~  215 (266)
T 3grp_A          169 ---------------------------------GQTNYCAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDKLN  215 (266)
T ss_dssp             ---------------------------------CHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHTCC
T ss_pred             ---------------------------------CchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhccC
Confidence                                             2478999999999999999999999999999999999999886543 


Q ss_pred             --------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          263 --------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       263 --------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                                    +...|+++|..+++|++ +...+++|+++..+|+..
T Consensus       216 ~~~~~~~~~~~p~~r~~~~edvA~~v~~L~s-~~~~~itG~~i~vdGG~~  264 (266)
T 3grp_A          216 EKQKEAIMAMIPMKRMGIGEEIAFATVYLAS-DEAAYLTGQTLHINGGMA  264 (266)
T ss_dssp             HHHHHHHHTTCTTCSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTC-
T ss_pred             HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC-ccccCccCCEEEECCCee
Confidence                          22579999999999997 677889999999999864

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=100.00  E-value=4.5e-40  Score=294.78  Aligned_cols=223  Identities=29%  Similarity=0.296  Sum_probs=200.8

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++   +.++.++.+|++|+++++++++++.+.++
T Consensus         5 ~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   81 (255)
T 4eso_A            5 NYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF---GPRVHALRSDIADLNEIAVLGAAAGQTLG   81 (255)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---GGGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCcceEEEccCCCHHHHHHHHHHHHHHhC
Confidence            578999999999999999999999999999999999999888888777   34789999999999999999999999999


Q ss_pred             CccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccch
Q 022103          107 ALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILED  185 (302)
Q Consensus       107 ~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~  185 (302)
                      ++|+||||||.... ++.+.+.++|++++++|+.++++++++++|.|++   .++||++||..+..+.+           
T Consensus        82 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~---~g~iv~isS~~~~~~~~-----------  147 (255)
T 4eso_A           82 AIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIRE---GGSIVFTSSVADEGGHP-----------  147 (255)
T ss_dssp             SEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEECCGGGSSBCT-----------
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhc---CCEEEEECChhhcCCCC-----------
Confidence            99999999998754 6788999999999999999999999999999865   48999999998875532           


Q ss_pred             hhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC---
Q 022103          186 EELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ---  262 (302)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~---  262 (302)
                                                     ++..|++||+|+++|+++|+.|++++||+||+|+||+|+|++....   
T Consensus       148 -------------------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~  196 (255)
T 4eso_A          148 -------------------------------GMSVYSASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGIT  196 (255)
T ss_dssp             -------------------------------TBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCTTSC
T ss_pred             -------------------------------CchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEecCcccCcccccccCC
Confidence                                           2478999999999999999999999999999999999999986532   


Q ss_pred             ------------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcccC
Q 022103          263 ------------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVK  299 (302)
Q Consensus       263 ------------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  299 (302)
                                        +..+|+|+|..+++|++ + ..+++|+.+..+|+...
T Consensus       197 ~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s-~-~~~itG~~i~vdGG~~~  249 (255)
T 4eso_A          197 EAERAEFKTLGDNITPMKRNGTADEVARAVLFLAF-E-ATFTTGAKLAVDGGLGQ  249 (255)
T ss_dssp             HHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHH-T-CTTCCSCEEEESTTTTT
T ss_pred             hhhHHHHHHHHhccCCCCCCcCHHHHHHHHHHHcC-c-CcCccCCEEEECCCccc
Confidence                              12479999999999998 5 78899999999998653

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=100.00  E-value=2.3e-40  Score=295.85  Aligned_cols=229  Identities=25%  Similarity=0.334  Sum_probs=202.7

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCC-ceeEEEeeC--CCHHHHHHHHHHHH
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGL-PVNFFQLDV--SDPSSIEAFVSWFK  102 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dl--t~~~~~~~~~~~~~  102 (302)
                      ..+++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.+. ++.++.+|+  +|.++++++++++.
T Consensus         8 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (252)
T 3f1l_A            8 DLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIA   87 (252)
T ss_dssp             TTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHH
Confidence            458899999999999999999999999999999999999999998888876543 788999999  99999999999999


Q ss_pred             hhCCCccEEEEcCCCCC--CCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccc
Q 022103          103 SNFAALDILVNNAGVSF--NDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIK  180 (302)
Q Consensus       103 ~~~g~id~lv~~aG~~~--~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~  180 (302)
                      +.++++|+||||||...  .++.+.+.++|++++++|+.++++++++++|.|.++ +.++||++||..+..+.+      
T Consensus        88 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~-~~g~iv~isS~~~~~~~~------  160 (252)
T 3f1l_A           88 VNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKS-DAGSLVFTSSSVGRQGRA------  160 (252)
T ss_dssp             HHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTS-SSCEEEEECCGGGTSCCT------
T ss_pred             HhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHC-CCCEEEEECChhhccCCC------
Confidence            99999999999999853  367889999999999999999999999999999887 579999999998875532      


Q ss_pred             cccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCC
Q 022103          181 SILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ  260 (302)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~  260 (302)
                                                          ++.+|++||+|+++|+++|+.|+++. |+||+|+||+|+|+|..
T Consensus       161 ------------------------------------~~~~Y~asK~a~~~l~~~la~e~~~~-irvn~v~PG~v~t~~~~  203 (252)
T 3f1l_A          161 ------------------------------------NWGAYAASKFATEGMMQVLADEYQQR-LRVNCINPGGTRTAMRA  203 (252)
T ss_dssp             ------------------------------------TCHHHHHHHHHHHHHHHHHHHHTTTT-CEEEEEECCSBSSHHHH
T ss_pred             ------------------------------------CCchhHHHHHHHHHHHHHHHHHhcCC-cEEEEEecCcccCchhh
Confidence                                                24789999999999999999999877 99999999999998854


Q ss_pred             CC-------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcccC
Q 022103          261 GQ-------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVK  299 (302)
Q Consensus       261 ~~-------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  299 (302)
                      ..       ...+|+++|..+++|++ +...+++|+++..+|+...
T Consensus       204 ~~~~~~~~~~~~~p~dva~~~~~L~s-~~~~~itG~~i~vdgG~~~  248 (252)
T 3f1l_A          204 SAFPTEDPQKLKTPADIMPLYLWLMG-DDSRRKTGMTFDAQPGRKP  248 (252)
T ss_dssp             HHCTTCCGGGSBCTGGGHHHHHHHHS-GGGTTCCSCEEESSCC---
T ss_pred             hhCCccchhccCCHHHHHHHHHHHcC-ccccCCCCCEEEeCCCcCC
Confidence            21       23579999999999997 6778899999999998654

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=100.00  E-value=2.4e-40  Score=299.41  Aligned_cols=228  Identities=20%  Similarity=0.272  Sum_probs=196.8

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhh-------HHHHHHHHhhCCCceeEEEeeCCCHHHHHHHH
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVER-------GQRAVESLSEKGLPVNFFQLDVSDPSSIEAFV   98 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~-------~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~   98 (302)
                      +++++|+++||||++|||+++|++|+++|++|++++|+.++       +++..+++...+.++.++.+|++|++++++++
T Consensus         2 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   81 (274)
T 3e03_A            2 LTLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAV   81 (274)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHH
Confidence            56899999999999999999999999999999999998753       66677777776788999999999999999999


Q ss_pred             HHHHhhCCCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCc
Q 022103           99 SWFKSNFAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNP  177 (302)
Q Consensus        99 ~~~~~~~g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~  177 (302)
                      +++.+++|++|+||||||.... ++.+.+.++|++++++|+.++++++++++|.|.++ +.++||++||..+..+..   
T Consensus        82 ~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~iv~isS~~~~~~~~---  157 (274)
T 3e03_A           82 AATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQA-PNPHILTLAPPPSLNPAW---  157 (274)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTS-SSCEEEECCCCCCCCHHH---
T ss_pred             HHHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhc-CCceEEEECChHhcCCCC---
Confidence            9999999999999999998754 57889999999999999999999999999999887 579999999998875421   


Q ss_pred             ccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecC-cccC
Q 022103          178 NIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPG-FTQT  256 (302)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG-~v~T  256 (302)
                                                           .+++..|++||+|+++|+++++.|++++||+||+|+|| +++|
T Consensus       158 -------------------------------------~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T  200 (274)
T 3e03_A          158 -------------------------------------WGAHTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIAT  200 (274)
T ss_dssp             -------------------------------------HHHCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC
T ss_pred             -------------------------------------CCCCchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCccccc
Confidence                                                 01236799999999999999999999999999999999 6899


Q ss_pred             CCCCCCC------CCCHHHHHHHHHHHhhcCCCCCCCcceeecCC
Q 022103          257 SMTQGQG------SHTADEAADVGARLLLLHPQQLPTAKFYIGLD  295 (302)
Q Consensus       257 ~~~~~~~------~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~  295 (302)
                      +|.....      ..+|+++|..+++|++ +...+++|+++..++
T Consensus       201 ~~~~~~~~~~~~~~~~pedvA~~v~~l~s-~~~~~itG~~i~~~g  244 (274)
T 3e03_A          201 DAINMLPGVDAAACRRPEIMADAAHAVLT-REAAGFHGQFLIDDE  244 (274)
T ss_dssp             -------CCCGGGSBCTHHHHHHHHHHHT-SCCTTCCSCEEEHHH
T ss_pred             chhhhcccccccccCCHHHHHHHHHHHhC-ccccccCCeEEEcCc
Confidence            9975432      2579999999999997 677889999995544

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=100.00  E-value=1.1e-39  Score=292.88  Aligned_cols=230  Identities=22%  Similarity=0.209  Sum_probs=202.4

Q ss_pred             cccccCcEEEEeCCC-chHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCC-CceeEEEeeCCCHHHHHHHHHHHH
Q 022103           25 KWWSKETIAIVTGAN-KGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKG-LPVNFFQLDVSDPSSIEAFVSWFK  102 (302)
Q Consensus        25 ~~~~~~k~vlItGas-~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dlt~~~~~~~~~~~~~  102 (302)
                      ...+++|+++||||+ +|||+++|++|+++|++|++++|+.+++++..+++.+.+ .++.++.+|++|.++++++++++.
T Consensus        17 ~~~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   96 (266)
T 3o38_A           17 HGLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTV   96 (266)
T ss_dssp             CSTTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHH
Confidence            445899999999997 599999999999999999999999999999999886654 589999999999999999999999


Q ss_pred             hhCCCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCccccc
Q 022103          103 SNFAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKS  181 (302)
Q Consensus       103 ~~~g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~  181 (302)
                      ++++++|+||||||.... ++.+.+.++|++++++|+.++++++++++|.|.+++..++||++||..+..+.+       
T Consensus        97 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-------  169 (266)
T 3o38_A           97 EKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQH-------  169 (266)
T ss_dssp             HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCCCT-------
T ss_pred             HHhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCCCC-------
Confidence            999999999999998754 577889999999999999999999999999998875678999999988875532       


Q ss_pred             ccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCC
Q 022103          182 ILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG  261 (302)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~  261 (302)
                                                         ++..|++||+|++.|+++|+.|++++||+|++|+||+|+|+|.+.
T Consensus       170 -----------------------------------~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~  214 (266)
T 3o38_A          170 -----------------------------------SQSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEK  214 (266)
T ss_dssp             -----------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC-----
T ss_pred             -----------------------------------CCchHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhc
Confidence                                               247899999999999999999999999999999999999999654


Q ss_pred             C----------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          262 Q----------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       262 ~----------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                      .                +..+|+++|..+++|+. +...+++|+++..+|+.
T Consensus       215 ~~~~~~~~~~~~~~~~~r~~~~~dva~~i~~l~s-~~~~~~tG~~i~vdgG~  265 (266)
T 3o38_A          215 TSSSELLDRLASDEAFGRAAEPWEVAATIAFLAS-DYSSYMTGEVVSVSSQR  265 (266)
T ss_dssp             ------------CCTTSSCCCHHHHHHHHHHHHS-GGGTTCCSCEEEESSCC
T ss_pred             cCcHHHHHHHHhcCCcCCCCCHHHHHHHHHHHcC-ccccCccCCEEEEcCCc
Confidence            3                12579999999999987 56778999999999875

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=100.00  E-value=6.1e-40  Score=296.64  Aligned_cols=230  Identities=30%  Similarity=0.293  Sum_probs=204.1

Q ss_pred             cccccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecC-hhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHH
Q 022103           23 STKWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARD-VERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWF  101 (302)
Q Consensus        23 ~~~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~-~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~  101 (302)
                      +...++++|++|||||++|||+++|++|+++|++|++++++ .++++...+++.+.+.++.++.+|++|+++++++++++
T Consensus        24 m~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~  103 (271)
T 3v2g_A           24 MTSISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRET  103 (271)
T ss_dssp             HTTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             ccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence            44567899999999999999999999999999999998665 56778888888888889999999999999999999999


Q ss_pred             HhhCCCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccc
Q 022103          102 KSNFAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIK  180 (302)
Q Consensus       102 ~~~~g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~  180 (302)
                      .+.+|++|+||||||.... ++.+.+.++|++++++|+.++++++++++|.|++   .++||++||..+..+.       
T Consensus       104 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~---~g~iv~isS~~~~~~~-------  173 (271)
T 3v2g_A          104 VEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGD---GGRIITIGSNLAELVP-------  173 (271)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT---TCEEEEECCGGGTCCC-------
T ss_pred             HHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc---CCEEEEEeChhhccCC-------
Confidence            9999999999999998754 6788999999999999999999999999999864   5899999997665331       


Q ss_pred             cccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCC
Q 022103          181 SILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ  260 (302)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~  260 (302)
                                                        .+++.+|++||+|+++|+++|+.|++++||+||+|+||+|+|+|..
T Consensus       174 ----------------------------------~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~  219 (271)
T 3v2g_A          174 ----------------------------------WPGISLYSASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNP  219 (271)
T ss_dssp             ----------------------------------STTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSC
T ss_pred             ----------------------------------CCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCccc
Confidence                                              1234789999999999999999999999999999999999999976


Q ss_pred             CCC--------------CCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          261 GQG--------------SHTADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       261 ~~~--------------~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                      ...              ..+|+++|..+++|++ +...+++|+.+..+|+.
T Consensus       220 ~~~~~~~~~~~~~~~~r~~~pedvA~~v~fL~s-~~~~~itG~~i~vdGG~  269 (271)
T 3v2g_A          220 ADGDHAEAQRERIATGSYGEPQDIAGLVAWLAG-PQGKFVTGASLTIDGGA  269 (271)
T ss_dssp             SSCSSHHHHHHTCTTSSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTT
T ss_pred             ccchhHHHHHhcCCCCCCCCHHHHHHHHHHHhC-cccCCccCCEEEeCcCc
Confidence            432              2579999999999997 67788999999999875

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=100.00  E-value=1.4e-40  Score=301.46  Aligned_cols=231  Identities=21%  Similarity=0.242  Sum_probs=206.8

Q ss_pred             ccccccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHH
Q 022103           22 SSTKWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWF  101 (302)
Q Consensus        22 ~~~~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~  101 (302)
                      ....+++++|+++||||++|||+++|++|+++|++|++++|+.++++...+++.+.+.++.++.+|++|.++++++++++
T Consensus        25 ~~~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~  104 (275)
T 4imr_A           25 LETIFGLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERA  104 (275)
T ss_dssp             HHHHHCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHH
T ss_pred             ccccCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHH
Confidence            34456789999999999999999999999999999999999999999999999888889999999999999999999999


Q ss_pred             HhhCCCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccc
Q 022103          102 KSNFAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIK  180 (302)
Q Consensus       102 ~~~~g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~  180 (302)
                      .+. +++|+||||||.... ++.+.+.++|+.++++|+.|+++++++++|.|.++ +.++||++||..+..+..      
T Consensus       105 ~~~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~Iv~isS~~~~~~~~------  176 (275)
T 4imr_A          105 EAI-APVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVAR-KWGRVVSIGSINQLRPKS------  176 (275)
T ss_dssp             HHH-SCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTSCCT------
T ss_pred             HHh-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEECCHHhCCCCC------
Confidence            888 999999999998654 57889999999999999999999999999999876 579999999988865322      


Q ss_pred             cccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCC
Q 022103          181 SILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ  260 (302)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~  260 (302)
                                                          ...+|++||+|+++|+++|+.|++++||+||+|+||+|+|+|..
T Consensus       177 ------------------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~  220 (275)
T 4imr_A          177 ------------------------------------VVTAYAATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNA  220 (275)
T ss_dssp             ------------------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHH
T ss_pred             ------------------------------------CchhhHHHHHHHHHHHHHHHHHhcccCcEEEEEEeccccCcccc
Confidence                                                23679999999999999999999999999999999999998753


Q ss_pred             CC-------------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          261 GQ-------------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       261 ~~-------------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                      ..                   +..+|+++|..+++|++ +...+++|+++..+|++
T Consensus       221 ~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s-~~a~~itG~~i~vdGG~  275 (275)
T 4imr_A          221 DRRAQDPEGWDEYVRTLNWMGRAGRPEEMVGAALFLAS-EACSFMTGETIFLTGGY  275 (275)
T ss_dssp             HHHHHCHHHHHHHHHHHSTTCSCBCGGGGHHHHHHHHS-GGGTTCCSCEEEESSCC
T ss_pred             cccccChHHHHHHHhhcCccCCCcCHHHHHHHHHHHcC-cccCCCCCCEEEeCCCC
Confidence            21                   23579999999999997 67788999999999863

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=100.00  E-value=5.5e-40  Score=293.73  Aligned_cols=225  Identities=18%  Similarity=0.180  Sum_probs=190.9

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      +++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.+.++.++.+|++|+++++++++++.+. 
T Consensus         3 ~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-   81 (252)
T 3h7a_A            3 LTPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAH-   81 (252)
T ss_dssp             --CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH-
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhh-
Confidence            5688999999999999999999999999999999999999999999999888889999999999999999999999999 


Q ss_pred             CCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccc
Q 022103          106 AALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILE  184 (302)
Q Consensus       106 g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~  184 (302)
                      +++|+||||||.... ++.+.+.++|++++++|+.++++++++++|.|+++ +.++||++||..+..+.+          
T Consensus        82 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~~----------  150 (252)
T 3h7a_A           82 APLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAH-GQGKIFFTGATASLRGGS----------  150 (252)
T ss_dssp             SCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEEEGGGTCCCT----------
T ss_pred             CCceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEECCHHHcCCCC----------
Confidence            999999999998754 57789999999999999999999999999999887 579999999998876533          


Q ss_pred             hhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEE-EEeecCcccCCCCCCC-
Q 022103          185 DEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISV-NSYCPGFTQTSMTQGQ-  262 (302)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V-~~v~PG~v~T~~~~~~-  262 (302)
                                                      ++.+|++||+|+++|+++|+.|++++||+| |+|+||+|+|+|.+.. 
T Consensus       151 --------------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~~  198 (252)
T 3h7a_A          151 --------------------------------GFAAFASAKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRERR  198 (252)
T ss_dssp             --------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC------------
T ss_pred             --------------------------------CCccHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhccc
Confidence                                            247899999999999999999999999999 9999999999997653 


Q ss_pred             -------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCC
Q 022103          263 -------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLD  295 (302)
Q Consensus       263 -------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~  295 (302)
                                   +..+|+++|..+++|+. ++.....|.+....-
T Consensus       199 ~~~~~~~~~~~~~~~~~pedvA~~~~~l~s-~~~~~~~~~i~~~~~  243 (252)
T 3h7a_A          199 EQMFGKDALANPDLLMPPAAVAGAYWQLYQ-QPKSAWTFEMEIRPY  243 (252)
T ss_dssp             ---------------CCHHHHHHHHHHHHH-CCGGGBCSEEEEBCC
T ss_pred             hhhhhhhhhcCCccCCCHHHHHHHHHHHHh-CchhcceeeEEeeec
Confidence                         24689999999999998 455556676655443

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=7.5e-40  Score=295.22  Aligned_cols=240  Identities=25%  Similarity=0.381  Sum_probs=203.3

Q ss_pred             CCCCcccccccccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHH-hhCCCceeEEEeeCCCHHH
Q 022103           15 SSSSSLVSSTKWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESL-SEKGLPVNFFQLDVSDPSS   93 (302)
Q Consensus        15 ~~~~~~~~~~~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l-~~~~~~~~~~~~Dlt~~~~   93 (302)
                      +..+...+....++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++ ...+.++.++.+|++|+++
T Consensus         6 ~~~~~~~~~~~~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~   85 (267)
T 1vl8_A            6 IHHHHHHMKEVFDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEE   85 (267)
T ss_dssp             -----------CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHH
T ss_pred             cCCCCCCCCCCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHH
Confidence            344455566677799999999999999999999999999999999999998888888777 4446678899999999999


Q ss_pred             HHHHHHHHHhhCCCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCC-ccc
Q 022103           94 IEAFVSWFKSNFAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRL-GTL  171 (302)
Q Consensus        94 ~~~~~~~~~~~~g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~-~~~  171 (302)
                      ++++++++.+.++++|+||||||.... ++.+.+.++|++++++|+.++++++++++|.|.++ +.++||++||.. +..
T Consensus        86 v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-~~g~iv~isS~~~~~~  164 (267)
T 1vl8_A           86 VKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRES-DNPSIINIGSLTVEEV  164 (267)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTC-SSCEEEEECCGGGTCC
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCcEEEEECCcchhcc
Confidence            999999999999999999999998654 57788999999999999999999999999999876 578999999987 654


Q ss_pred             ccccCcccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeec
Q 022103          172 SKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCP  251 (302)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~P  251 (302)
                      +.                                          +++..|++||++++.|+++++.|++++||+||+|+|
T Consensus       165 ~~------------------------------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~P  202 (267)
T 1vl8_A          165 TM------------------------------------------PNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAP  202 (267)
T ss_dssp             CS------------------------------------------SSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEE
T ss_pred             CC------------------------------------------CCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEe
Confidence            32                                          224789999999999999999999999999999999


Q ss_pred             CcccCCCCCCC-----------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          252 GFTQTSMTQGQ-----------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       252 G~v~T~~~~~~-----------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                      |+++|+|....                 +..+|+++|..+++|+. +...+++|+++..+|+..
T Consensus       203 G~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s-~~~~~itG~~i~vdGG~~  265 (267)
T 1vl8_A          203 GWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLKGVAVFLAS-EEAKYVTGQIIFVDGGWT  265 (267)
T ss_dssp             CCBCSTTTHHHHTCHHHHHHHHHTCTTSSCBCGGGGHHHHHHHHS-GGGTTCCSCEEEESTTGG
T ss_pred             ccCccccccccccChHHHHHHHhhCCCCCCcCHHHHHHHHHHHcC-ccccCCcCCeEEECCCCC
Confidence            99999985421                 23689999999999987 566789999999998853

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=100.00  E-value=6.3e-40  Score=295.90  Aligned_cols=232  Identities=27%  Similarity=0.280  Sum_probs=202.1

Q ss_pred             cccccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecC-hhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHH
Q 022103           23 STKWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARD-VERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWF  101 (302)
Q Consensus        23 ~~~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~-~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~  101 (302)
                      ...+++++|+++||||++|||+++|++|+++|++|++++|+ .+..+...+++.+.+.++.++.+|++|+++++++++++
T Consensus        22 ~~~m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~  101 (271)
T 4iin_A           22 SNAMQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTI  101 (271)
T ss_dssp             --CCCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             hhhcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHH
Confidence            44567899999999999999999999999999999999994 55666777778777888999999999999999999999


Q ss_pred             HhhCCCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccc
Q 022103          102 KSNFAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIK  180 (302)
Q Consensus       102 ~~~~g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~  180 (302)
                      .+.++++|+||||||.... .+.+.+.++|++++++|+.+++++++.++|.|.++ +.++||++||..+..+.+      
T Consensus       102 ~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~~~~------  174 (271)
T 4iin_A          102 VQSDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKS-RFGSVVNVASIIGERGNM------  174 (271)
T ss_dssp             HHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCHHHHHCCT------
T ss_pred             HHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhc-CCCEEEEEechhhcCCCC------
Confidence            9999999999999998755 56788999999999999999999999999999887 569999999988765532      


Q ss_pred             cccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCC
Q 022103          181 SILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ  260 (302)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~  260 (302)
                                                          ++..|++||+|++.++++++.|++++||+|++|+||+|+|+|.+
T Consensus       175 ------------------------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~  218 (271)
T 4iin_A          175 ------------------------------------GQTNYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNA  218 (271)
T ss_dssp             ------------------------------------TCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC---
T ss_pred             ------------------------------------CchHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchh
Confidence                                                24789999999999999999999999999999999999999976


Q ss_pred             CCC---------------CCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          261 GQG---------------SHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       261 ~~~---------------~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                      ...               ..+|+++|..+++|+. +...+++|+++..+|+..
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~p~dvA~~i~~l~s-~~~~~itG~~i~vdGG~~  270 (271)
T 4iin_A          219 NLKDELKADYVKNIPLNRLGSAKEVAEAVAFLLS-DHSSYITGETLKVNGGLY  270 (271)
T ss_dssp             ---------CGGGCTTCSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTSC
T ss_pred             hhcHHHHHHHHhcCCcCCCcCHHHHHHHHHHHhC-CCcCCCcCCEEEeCCCee
Confidence            531               2579999999999997 567789999999999853

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=100.00  E-value=6e-40  Score=294.48  Aligned_cols=227  Identities=25%  Similarity=0.257  Sum_probs=197.7

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEE-ecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhh
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILT-ARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSN  104 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~-~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~  104 (302)
                      .++++|+++||||++|||+++|++|+++|++|+++ .|+.+..+...+++.+.+.++.++.+|++|+++++++++++.++
T Consensus         4 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (259)
T 3edm_A            4 QRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADK   83 (259)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            56889999999999999999999999999999998 66777788888888887888999999999999999999999999


Q ss_pred             CCCccEEEEcCCCC-C-CCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcc-cccccCccccc
Q 022103          105 FAALDILVNNAGVS-F-NDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGT-LSKVRNPNIKS  181 (302)
Q Consensus       105 ~g~id~lv~~aG~~-~-~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~-~~~~~~~~~~~  181 (302)
                      +|++|+||||||.. . .++.+.+.++|++++++|+.++++++++++|.|.+   .++||++||..+. .+.        
T Consensus        84 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~---~g~iv~isS~~~~~~~~--------  152 (259)
T 3edm_A           84 FGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAK---GGAIVTFSSQAGRDGGG--------  152 (259)
T ss_dssp             HCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEECCHHHHHCCS--------
T ss_pred             hCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CCEEEEEcCHHhccCCC--------
Confidence            99999999999976 3 36788999999999999999999999999999976   4899999998875 222        


Q ss_pred             ccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCC
Q 022103          182 ILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG  261 (302)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~  261 (302)
                                                        +++.+|++||+|+++|+++++.|+++. |+||+|+||+|+|+|...
T Consensus       153 ----------------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~-I~vn~v~PG~v~T~~~~~  197 (259)
T 3edm_A          153 ----------------------------------PGALAYATSKGAVMTFTRGLAKEVGPK-IRVNAVCPGMISTTFHDT  197 (259)
T ss_dssp             ----------------------------------TTCHHHHHHHHHHHHHHHHHHHHHTTT-CEEEEEEECCBCC-----
T ss_pred             ----------------------------------CCcHHHHHHHHHHHHHHHHHHHHHCCC-CEEEEEEECCCcCccccc
Confidence                                              224789999999999999999999886 999999999999998764


Q ss_pred             CC----------------CCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcccC
Q 022103          262 QG----------------SHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVK  299 (302)
Q Consensus       262 ~~----------------~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  299 (302)
                      ..                ..+|+++|..+++|++ +...+++|+++..+|+...
T Consensus       198 ~~~~~~~~~~~~~~p~~r~~~pedva~~v~~L~s-~~~~~itG~~i~vdGg~~~  250 (259)
T 3edm_A          198 FTKPEVRERVAGATSLKREGSSEDVAGLVAFLAS-DDAAYVTGACYDINGGVLF  250 (259)
T ss_dssp             -----------------CCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESBCSSB
T ss_pred             ccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHcC-ccccCccCCEEEECCCcCC
Confidence            31                2579999999999997 6778899999999998654

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=100.00  E-value=1e-39  Score=294.55  Aligned_cols=227  Identities=22%  Similarity=0.256  Sum_probs=201.1

Q ss_pred             cccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEec-ChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHh
Q 022103           25 KWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTAR-DVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKS  103 (302)
Q Consensus        25 ~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r-~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~  103 (302)
                      ..++++|++|||||++|||+++|++|+++|++|+++++ +.+.++...+++.+.+.++.++.+|++|+++++++++++.+
T Consensus        13 ~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   92 (270)
T 3is3_A           13 PGRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVA   92 (270)
T ss_dssp             TTCCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            45689999999999999999999999999999999766 45677888888888888999999999999999999999999


Q ss_pred             hCCCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCc-ccccccCccccc
Q 022103          104 NFAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLG-TLSKVRNPNIKS  181 (302)
Q Consensus       104 ~~g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~-~~~~~~~~~~~~  181 (302)
                      +++++|+||||||.... ++.+.+.++|++++++|+.++++++++++|.|.+   .++||++||..+ ..+.        
T Consensus        93 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~---~g~iv~isS~~~~~~~~--------  161 (270)
T 3is3_A           93 HFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTE---GGRIVLTSSNTSKDFSV--------  161 (270)
T ss_dssp             HHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT---TCEEEEECCTTTTTCCC--------
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc---CCeEEEEeCchhccCCC--------
Confidence            99999999999998754 5788999999999999999999999999999975   489999999873 3222        


Q ss_pred             ccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCC
Q 022103          182 ILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG  261 (302)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~  261 (302)
                                                        +++..|++||+|+++|+++|+.|++++||+||+|+||+|+|+|...
T Consensus       162 ----------------------------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~  207 (270)
T 3is3_A          162 ----------------------------------PKHSLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHE  207 (270)
T ss_dssp             ----------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHH
T ss_pred             ----------------------------------CCCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhh
Confidence                                              2347899999999999999999999999999999999999998641


Q ss_pred             ---------------------------CCCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          262 ---------------------------QGSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       262 ---------------------------~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                                                 .+..+|+++|..+++|++ +...+++|+++..+|+.
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~L~s-~~~~~itG~~i~vdGG~  269 (270)
T 3is3_A          208 VSHHYIPNGTSYTAEQRQQMAAHASPLHRNGWPQDVANVVGFLVS-KEGEWVNGKVLTLDGGA  269 (270)
T ss_dssp             HGGGGSTTGGGSCHHHHHHHHHHHSTTCSCBCHHHHHHHHHHHTS-GGGTTCCSCEEEESTTC
T ss_pred             hhhhccccccccchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcC-CccCCccCcEEEeCCCC
Confidence                                       022569999999999997 67788999999999874

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=100.00  E-value=1.7e-39  Score=293.59  Aligned_cols=230  Identities=30%  Similarity=0.370  Sum_probs=201.6

Q ss_pred             cccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhh
Q 022103           25 KWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSN  104 (302)
Q Consensus        25 ~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~  104 (302)
                      .+++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.+.++.++.+|++|+++++++++++.+.
T Consensus        16 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   95 (273)
T 1ae1_A           16 RWSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHV   95 (273)
T ss_dssp             CCCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            45689999999999999999999999999999999999999988888888777778999999999999999999999999


Q ss_pred             C-CCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccc
Q 022103          105 F-AALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSI  182 (302)
Q Consensus       105 ~-g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~  182 (302)
                      + +++|+||||||.... ++.+.+.++|+.++++|+.++++++++++|.|.++ +.++||++||..+..+.+        
T Consensus        96 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~-~~g~iv~isS~~~~~~~~--------  166 (273)
T 1ae1_A           96 FDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKAS-QNGNVIFLSSIAGFSALP--------  166 (273)
T ss_dssp             TTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TSEEEEEECCGGGTSCCT--------
T ss_pred             cCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEEcCHhhcCCCC--------
Confidence            9 999999999998644 57888999999999999999999999999999876 468999999988865432        


Q ss_pred             cchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC
Q 022103          183 LEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ  262 (302)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~  262 (302)
                                                        ++..|++||++++.|+++++.|++++||+||+|+||+++|+|....
T Consensus       167 ----------------------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  212 (273)
T 1ae1_A          167 ----------------------------------SVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETA  212 (273)
T ss_dssp             ----------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------
T ss_pred             ----------------------------------CcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhh
Confidence                                              2478999999999999999999999999999999999999986431


Q ss_pred             ---------------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          263 ---------------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       263 ---------------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                                           +..+|+++|..+++|+. +...+++|+++..+|+..
T Consensus       213 ~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s-~~~~~~tG~~i~vdGG~~  268 (273)
T 1ae1_A          213 IKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFLCF-PAASYITGQIIWADGGFT  268 (273)
T ss_dssp             ------CHHHHHHHHHHSTTCSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGG
T ss_pred             hhcccCcHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC-ccccCcCCCEEEECCCcc
Confidence                                 12579999999999987 667789999999999854

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=100.00  E-value=1.2e-39  Score=289.85  Aligned_cols=226  Identities=27%  Similarity=0.348  Sum_probs=202.5

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEec-ChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTAR-DVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r-~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      +++|+++||||++|||+++|++|+++|++|++++| +.+++++..+++.+.+.++.++.+|++|+++++++++++.+.++
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   81 (246)
T 2uvd_A            2 LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFG   81 (246)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            57899999999999999999999999999999999 88888888888877777889999999999999999999999999


Q ss_pred             CccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccch
Q 022103          107 ALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILED  185 (302)
Q Consensus       107 ~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~  185 (302)
                      ++|+||||||.... ++.+.+.++|++++++|+.++++++++++|.|.++ +.++||++||..+..+.+           
T Consensus        82 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~~-----------  149 (246)
T 2uvd_A           82 QVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQ-RHGRIVNIASVVGVTGNP-----------  149 (246)
T ss_dssp             CCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCTHHHHCCT-----------
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEEEECCHHhcCCCC-----------
Confidence            99999999998654 57788999999999999999999999999999876 469999999988765432           


Q ss_pred             hhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC---
Q 022103          186 EELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ---  262 (302)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~---  262 (302)
                                                     ++..|++||++++.++++++.|++++||+||+|+||+++|+|....   
T Consensus       150 -------------------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~  198 (246)
T 2uvd_A          150 -------------------------------GQANYVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDMTDVLDEN  198 (246)
T ss_dssp             -------------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSCCCTT
T ss_pred             -------------------------------CCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeccccCcchhhcCHH
Confidence                                           2477999999999999999999999999999999999999986542   


Q ss_pred             ------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          263 ------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       263 ------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                                  ...+|+++|..+++++. ++..+++|+++..+|+.
T Consensus       199 ~~~~~~~~~p~~~~~~~~dvA~~~~~l~s-~~~~~~tG~~~~vdgG~  244 (246)
T 2uvd_A          199 IKAEMLKLIPAAQFGEAQDIANAVTFFAS-DQSKYITGQTLNVDGGM  244 (246)
T ss_dssp             HHHHHHHTCTTCSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTS
T ss_pred             HHHHHHhcCCCCCCcCHHHHHHHHHHHcC-chhcCCCCCEEEECcCc
Confidence                        12579999999999986 56778999999999875

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=100.00  E-value=1.1e-39  Score=295.62  Aligned_cols=229  Identities=23%  Similarity=0.251  Sum_probs=203.7

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhh-CCCceeEEEeeCCCHHHHHHHHHHHHhh
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSE-KGLPVNFFQLDVSDPSSIEAFVSWFKSN  104 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dlt~~~~~~~~~~~~~~~  104 (302)
                      ..+++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+ .+.++.++.+|++|+++++++++++.++
T Consensus        23 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  102 (277)
T 4fc7_A           23 DLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKE  102 (277)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            458999999999999999999999999999999999999998888887754 3568999999999999999999999999


Q ss_pred             CCCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCccccccc
Q 022103          105 FAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSIL  183 (302)
Q Consensus       105 ~g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~  183 (302)
                      ++++|+||||||.... ++.+.+.++|++++++|+.++++++++++|.|.++ ..++||++||..+..+.+.        
T Consensus       103 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~~~~~--------  173 (277)
T 4fc7_A          103 FGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRD-HGGVIVNITATLGNRGQAL--------  173 (277)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHH-HCEEEEEECCSHHHHTCTT--------
T ss_pred             cCCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCCEEEEECchhhCCCCCC--------
Confidence            9999999999997654 57889999999999999999999999999998776 4799999999988755322        


Q ss_pred             chhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCC--
Q 022103          184 EDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG--  261 (302)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~--  261 (302)
                                                        +..|++||+|+++|+++|+.|++++||+||+|+||+|+|++...  
T Consensus       174 ----------------------------------~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~  219 (277)
T 4fc7_A          174 ----------------------------------QVHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRL  219 (277)
T ss_dssp             ----------------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHHHH
T ss_pred             ----------------------------------cHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecchhhhhc
Confidence                                              37899999999999999999999999999999999999985210  


Q ss_pred             ----------------CCCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          262 ----------------QGSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       262 ----------------~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                                      .+..+|+|+|..+++|++ +...+++|+++..+|+..
T Consensus       220 ~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~fL~s-~~~~~itG~~i~vdGG~~  271 (277)
T 4fc7_A          220 GGPQASLSTKVTASPLQRLGNKTEIAHSVLYLAS-PLASYVTGAVLVADGGAW  271 (277)
T ss_dssp             SCCHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTHH
T ss_pred             cCCHHHHHHHhccCCCCCCcCHHHHHHHHHHHcC-CccCCcCCCEEEECCCcc
Confidence                            123689999999999997 677889999999999853

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=100.00  E-value=2e-40  Score=298.14  Aligned_cols=228  Identities=18%  Similarity=0.251  Sum_probs=197.1

Q ss_pred             cccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecC---hhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHH
Q 022103           25 KWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARD---VERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWF  101 (302)
Q Consensus        25 ~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~---~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~  101 (302)
                      .+++++|++|||||++|||+++|++|+++|++|++++|+   .+++++..+++.+.+.++.++.+|++|+++++++++++
T Consensus         6 ~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~   85 (262)
T 3ksu_A            6 YHDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFA   85 (262)
T ss_dssp             CSCCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence            356899999999999999999999999999999998765   45677778888877888999999999999999999999


Q ss_pred             HhhCCCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccc
Q 022103          102 KSNFAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIK  180 (302)
Q Consensus       102 ~~~~g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~  180 (302)
                      .++++++|+||||||.... ++.+.+.++|++++++|+.++++++++++|.|++   .++||++||..+..+.+.     
T Consensus        86 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~---~g~iv~isS~~~~~~~~~-----  157 (262)
T 3ksu_A           86 EKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNP---NGHIITIATSLLAAYTGF-----  157 (262)
T ss_dssp             HHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEE---EEEEEEECCCHHHHHHCC-----
T ss_pred             HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcC---CCEEEEEechhhccCCCC-----
Confidence            9999999999999998755 5788999999999999999999999999999943   589999999887654322     


Q ss_pred             cccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCC
Q 022103          181 SILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ  260 (302)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~  260 (302)
                                                           +.+|++||+|+++|+++|+.|++++||+||+|+||+|+|+|..
T Consensus       158 -------------------------------------~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~  200 (262)
T 3ksu_A          158 -------------------------------------YSTYAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFY  200 (262)
T ss_dssp             -------------------------------------CCC-----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHH
T ss_pred             -------------------------------------CchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCcccc
Confidence                                                 3679999999999999999999999999999999999998854


Q ss_pred             CC----------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcccC
Q 022103          261 GQ----------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVK  299 (302)
Q Consensus       261 ~~----------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  299 (302)
                      ..                +..+|+++|..+++|+. + ..+++|+++..+|+...
T Consensus       201 ~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~~L~s-~-~~~itG~~i~vdGg~~~  253 (262)
T 3ksu_A          201 GQETKESTAFHKSQAMGNQLTKIEDIAPIIKFLTT-D-GWWINGQTIFANGGYTT  253 (262)
T ss_dssp             TCC------------CCCCSCCGGGTHHHHHHHHT-T-TTTCCSCEEEESTTCCC
T ss_pred             ccCchHHHHHHHhcCcccCCCCHHHHHHHHHHHcC-C-CCCccCCEEEECCCccC
Confidence            31                23689999999999987 5 78899999999998654

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=100.00  E-value=3.3e-40  Score=294.82  Aligned_cols=228  Identities=21%  Similarity=0.297  Sum_probs=197.0

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhC--C-CceeEEEeeCCCHHHHHHHHHHHH
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEK--G-LPVNFFQLDVSDPSSIEAFVSWFK  102 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~--~-~~~~~~~~Dlt~~~~~~~~~~~~~  102 (302)
                      .++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.  + .++.++.+|++|+++++++++++.
T Consensus         3 ~~~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   82 (250)
T 3nyw_A            3 LEKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIH   82 (250)
T ss_dssp             --CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHH
Confidence            4678999999999999999999999999999999999999999988888654  2 578899999999999999999999


Q ss_pred             hhCCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccc
Q 022103          103 SNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSI  182 (302)
Q Consensus       103 ~~~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~  182 (302)
                      +.++++|+||||||.......+.+.++|++++++|+.++++++++++|.|+++ +.++||++||..+..+...       
T Consensus        83 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~~~~~-------  154 (250)
T 3nyw_A           83 QKYGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQ-KNGYIFNVASRAAKYGFAD-------  154 (250)
T ss_dssp             HHHCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECC-------CC-------
T ss_pred             HhcCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEEccHHhcCCCCC-------
Confidence            99999999999999875532378999999999999999999999999999876 5799999999988754221       


Q ss_pred             cchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC
Q 022103          183 LEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ  262 (302)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~  262 (302)
                                                         +..|++||+|+++|+++|+.|++++||+||+|+||+|+|+|....
T Consensus       155 -----------------------------------~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~  199 (250)
T 3nyw_A          155 -----------------------------------GGIYGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDMAKKA  199 (250)
T ss_dssp             -----------------------------------TTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHT
T ss_pred             -----------------------------------CcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCchhhhc
Confidence                                               478999999999999999999999999999999999999986533


Q ss_pred             -------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCc
Q 022103          263 -------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDP  296 (302)
Q Consensus       263 -------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  296 (302)
                             ...+|+++|..+++|+..+....+++..+..|++
T Consensus       200 ~~~~~~~~~~~p~dva~~v~~l~s~~~~~~~~~~~i~vd~~  240 (250)
T 3nyw_A          200 GTPFKDEEMIQPDDLLNTIRCLLNLSENVCIKDIVFEMKKS  240 (250)
T ss_dssp             TCCSCGGGSBCHHHHHHHHHHHHTSCTTEECCEEEEEEHHH
T ss_pred             CCCcccccCCCHHHHHHHHHHHHcCCCceEeeEEEEEeecc
Confidence                   2368999999999999877777888888887775

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=100.00  E-value=2e-39  Score=296.48  Aligned_cols=228  Identities=21%  Similarity=0.222  Sum_probs=193.6

Q ss_pred             cccccCcEEEEeCCC--chHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHH
Q 022103           25 KWWSKETIAIVTGAN--KGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFK  102 (302)
Q Consensus        25 ~~~~~~k~vlItGas--~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~  102 (302)
                      ...+++|++|||||+  +|||+++|++|+++|++|++++|+.+..+. .+++.+...++.++.+|++|+++++++++++.
T Consensus        26 ~~~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~  104 (293)
T 3grk_A           26 SGLLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKR-VEPLAEELGAFVAGHCDVADAASIDAVFETLE  104 (293)
T ss_dssp             -CTTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHH-HHHHHHHHTCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cccCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHH-HHHHHHhcCCceEEECCCCCHHHHHHHHHHHH
Confidence            346899999999999  459999999999999999999999644333 33333333468899999999999999999999


Q ss_pred             hhCCCccEEEEcCCCCC-----CCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCc
Q 022103          103 SNFAALDILVNNAGVSF-----NDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNP  177 (302)
Q Consensus       103 ~~~g~id~lv~~aG~~~-----~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~  177 (302)
                      ++++++|+||||||+..     .++.+.+.++|+.++++|+.++++++++++|.|.+   .++||++||..+..+.+   
T Consensus       105 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~---~g~Iv~isS~~~~~~~~---  178 (293)
T 3grk_A          105 KKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMAD---GGSILTLTYYGAEKVMP---  178 (293)
T ss_dssp             HHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTT---CEEEEEEECGGGTSBCT---
T ss_pred             HhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccC---CCEEEEEeehhhccCCC---
Confidence            99999999999999874     35778999999999999999999999999999975   58999999998875532   


Q ss_pred             ccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCC
Q 022103          178 NIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTS  257 (302)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~  257 (302)
                                                             ++.+|++||+|+++|+++|+.|++++||+||+|+||+|+|+
T Consensus       179 ---------------------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~  219 (293)
T 3grk_A          179 ---------------------------------------NYNVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTL  219 (293)
T ss_dssp             ---------------------------------------TTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC-
T ss_pred             ---------------------------------------chHHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcch
Confidence                                                   24789999999999999999999999999999999999999


Q ss_pred             CCCCCC-----------------CCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcccC
Q 022103          258 MTQGQG-----------------SHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVK  299 (302)
Q Consensus       258 ~~~~~~-----------------~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  299 (302)
                      |.....                 ..+|+++|..+++|++ +...+++|+++.++|+...
T Consensus       220 ~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s-~~~~~itG~~i~vdGG~~~  277 (293)
T 3grk_A          220 AASGIGDFRYILKWNEYNAPLRRTVTIDEVGDVGLYFLS-DLSRSVTGEVHHADSGYHV  277 (293)
T ss_dssp             -----CCHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGGG
T ss_pred             hhhcccchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcC-ccccCCcceEEEECCCccc
Confidence            976532                 3689999999999997 6778899999999998653

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.4e-39  Score=293.48  Aligned_cols=224  Identities=24%  Similarity=0.300  Sum_probs=194.7

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      +.+|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.+.++.++.+|++|+++++++++++.+.+|+
T Consensus         2 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   81 (264)
T 3tfo_A            2 VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGR   81 (264)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            46899999999999999999999999999999999999999999999888888999999999999999999999999999


Q ss_pred             ccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchh
Q 022103          108 LDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDE  186 (302)
Q Consensus       108 id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~  186 (302)
                      +|+||||||+... ++.+.+.++|++++++|+.|+++++++++|.|.++ +.++||++||..+..+.+            
T Consensus        82 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~IV~isS~~~~~~~~------------  148 (264)
T 3tfo_A           82 IDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQ-RSGQIINIGSIGALSVVP------------  148 (264)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTCCCT------------
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCeEEEEEcCHHHcccCC------------
Confidence            9999999998754 67889999999999999999999999999999876 579999999998875533            


Q ss_pred             hhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCCC---
Q 022103          187 ELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQG---  263 (302)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~~---  263 (302)
                                                    ++..|++||+|+++|+++|+.|+ + |||||+|+||+|+|+|.....   
T Consensus       149 ------------------------------~~~~Y~asKaal~~l~~~la~e~-~-gIrvn~v~PG~v~T~~~~~~~~~~  196 (264)
T 3tfo_A          149 ------------------------------TAAVYCATKFAVRAISDGLRQES-T-NIRVTCVNPGVVESELAGTITHEE  196 (264)
T ss_dssp             ------------------------------TCHHHHHHHHHHHHHHHHHHHHC-S-SEEEEEEEECCC------------
T ss_pred             ------------------------------CChhHHHHHHHHHHHHHHHHHhC-C-CCEEEEEecCCCcCcccccccchh
Confidence                                          24789999999999999999998 4 999999999999999975421   


Q ss_pred             -----------CCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          264 -----------SHTADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       264 -----------~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                                 ..+|+++|..+++|++ ++....+|.+++..+..
T Consensus       197 ~~~~~~~~~~~~~~pedvA~~v~~l~s-~~~~~~~~~i~i~p~~~  240 (264)
T 3tfo_A          197 TMAAMDTYRAIALQPADIARAVRQVIE-APQSVDTTEITIRPTAS  240 (264)
T ss_dssp             -----------CCCHHHHHHHHHHHHH-SCTTEEEEEEEEEECC-
T ss_pred             HHHHHHhhhccCCCHHHHHHHHHHHhc-CCccCccceEEEecCcc
Confidence                       2589999999999998 56777888888776543

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=1.1e-39  Score=295.63  Aligned_cols=238  Identities=20%  Similarity=0.214  Sum_probs=204.0

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecC------------hhhHHHHHHHHhhCCCceeEEEeeCCCHHH
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARD------------VERGQRAVESLSEKGLPVNFFQLDVSDPSS   93 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~------------~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~   93 (302)
                      .++++|++|||||++|||+++|++|+++|++|++++|+            .+++++...++...+.++.++.+|++|+++
T Consensus         6 ~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   85 (287)
T 3pxx_A            6 GRVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAA   85 (287)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHH
T ss_pred             cccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHH
Confidence            35889999999999999999999999999999999998            777788888888778899999999999999


Q ss_pred             HHHHHHHHHhhCCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCccccc
Q 022103           94 IEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSK  173 (302)
Q Consensus        94 ~~~~~~~~~~~~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~  173 (302)
                      ++++++++.++++++|+||||||..... .+.+.++|++++++|+.++++++++++|.|.   ..++||++||..+..+.
T Consensus        86 v~~~~~~~~~~~g~id~lv~nAg~~~~~-~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~---~~g~iv~isS~~~~~~~  161 (287)
T 3pxx_A           86 VSRELANAVAEFGKLDVVVANAGICPLG-AHLPVQAFADAFDVDFVGVINTVHAALPYLT---SGASIITTGSVAGLIAA  161 (287)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCC-TTCCTHHHHHHHHHHTHHHHHHHHHHGGGCC---TTCEEEEECCHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCcCccc-CcCCHHHHHHHhhhhhhhhHHHHHHHHHHhh---cCcEEEEeccchhcccc
Confidence            9999999999999999999999987655 3488999999999999999999999999993   35899999998887554


Q ss_pred             ccCcccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCc
Q 022103          174 VRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGF  253 (302)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~  253 (302)
                      ...+.                               .+....+++.+|++||+++++|+++++.|++++||+||+|+||+
T Consensus       162 ~~~~~-------------------------------~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~  210 (287)
T 3pxx_A          162 AQPPG-------------------------------AGGPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTN  210 (287)
T ss_dssp             HCCC------------------------------------CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESS
T ss_pred             ccccc-------------------------------ccccCCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCc
Confidence            22110                               00111233578999999999999999999999999999999999


Q ss_pred             ccCCCCCC------------------------------CCCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcccC
Q 022103          254 TQTSMTQG------------------------------QGSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVK  299 (302)
Q Consensus       254 v~T~~~~~------------------------------~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  299 (302)
                      |+|+|...                              .+..+|+++|..+++|++ +...+++|+.+..+|+...
T Consensus       211 v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~v~fL~s-~~a~~itG~~i~vdGG~~~  285 (287)
T 3pxx_A          211 VNTDMLNSAPMYRQFRPDLEAPSRADALLAFPAMQAMPTPYVEASDISNAVCFLAS-DESRYVTGLQFKVDAGAML  285 (287)
T ss_dssp             BSSTTTSSHHHHHHHCTTSSSCCHHHHHHHGGGGCSSSCSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGGG
T ss_pred             cccccccccchhhhhccccccchhHHHHhhhhhhcccCCCCCCHHHHHhhHheecc-hhhcCCCCceEeECchhhh
Confidence            99999753                              123578999999999997 6778899999999998653

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=100.00  E-value=1.4e-39  Score=288.25  Aligned_cols=223  Identities=19%  Similarity=0.159  Sum_probs=191.6

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      |++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++..   ++.++.+|++|+++++++++++.+.+++
T Consensus         1 Ms~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~D~~~~~~v~~~~~~~~~~~g~   77 (235)
T 3l6e_A            1 MSLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGN---AVIGIVADLAHHEDVDVAFAAAVEWGGL   77 (235)
T ss_dssp             --CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG---GEEEEECCTTSHHHHHHHHHHHHHHHCS
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcC---CceEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            4679999999999999999999999999999999999999888888743   6899999999999999999999999999


Q ss_pred             ccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchh
Q 022103          108 LDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDE  186 (302)
Q Consensus       108 id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~  186 (302)
                      +|+||||||.... ++.+.+.++|++++++|+.|+++++++++|.|.++  .++||++||..+..+.+            
T Consensus        78 id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--~~~iv~isS~~~~~~~~------------  143 (235)
T 3l6e_A           78 PELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGER--GGVLANVLSSAAQVGKA------------  143 (235)
T ss_dssp             CSEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTT--CEEEEEECCEECCSSCS------------
T ss_pred             CcEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc--CCEEEEEeCHHhcCCCC------------
Confidence            9999999998654 57788999999999999999999999999999876  35999999998876532            


Q ss_pred             hhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC----
Q 022103          187 ELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ----  262 (302)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~----  262 (302)
                                                    ++..|++||+|+++|+++|+.|++++||+||+|+||+|+|+|....    
T Consensus       144 ------------------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~  193 (235)
T 3l6e_A          144 ------------------------------NESLYCASKWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEFWDNTDHVD  193 (235)
T ss_dssp             ------------------------------SHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEEECCCC--------
T ss_pred             ------------------------------CCcHHHHHHHHHHHHHHHHHHHhhccCCEEEEEeCCCccCcchhccCCCC
Confidence                                          2478999999999999999999999999999999999999997654    


Q ss_pred             --CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          263 --GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       263 --~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                        +..+|+++|..+++++..+...+++|..+....+-
T Consensus       194 ~~~~~~pedvA~~v~~l~~~~~~~~i~~i~~~~~~~~  230 (235)
T 3l6e_A          194 PSGFMTPEDAAAYMLDALEARSSCHVTDLFIGRNEGH  230 (235)
T ss_dssp             ---CBCHHHHHHHHHHHTCCCSSEEEEEEEEEECCC-
T ss_pred             CcCCCCHHHHHHHHHHHHhCCCCcceeeEEEecCCCC
Confidence              34789999999999998777788888776655543

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=100.00  E-value=1.8e-39  Score=292.58  Aligned_cols=229  Identities=24%  Similarity=0.306  Sum_probs=202.6

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEe-cChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTA-RDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~-r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      .+++|+++||||++|||+++|++|+++|++|++++ |+.+.++...+++...+.++.++.+|++|.++++++++++.+.+
T Consensus        22 ~~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  101 (269)
T 3gk3_A           22 MQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADF  101 (269)
T ss_dssp             --CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             hhcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            36789999999999999999999999999999998 66667777777777777889999999999999999999999999


Q ss_pred             CCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccc
Q 022103          106 AALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILE  184 (302)
Q Consensus       106 g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~  184 (302)
                      +++|+||||||.... ++.+.+.++|+.++++|+.+++++++.++|.|.++ ..++||++||..+..+.+          
T Consensus       102 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~~~~----------  170 (269)
T 3gk3_A          102 GKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVER-RFGRIVNIGSVNGSRGAF----------  170 (269)
T ss_dssp             SCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCHHHHHCCT----------
T ss_pred             CCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCEEEEeCChhhccCCC----------
Confidence            999999999998754 57788999999999999999999999999999876 569999999988765532          


Q ss_pred             hhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCCC-
Q 022103          185 DEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQG-  263 (302)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~~-  263 (302)
                                                      ++..|++||+|++.|+++|+.|++++||+|++|+||+|+|+|..... 
T Consensus       171 --------------------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~  218 (269)
T 3gk3_A          171 --------------------------------GQANYASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAVPQ  218 (269)
T ss_dssp             --------------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC---
T ss_pred             --------------------------------CcchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhhch
Confidence                                            24789999999999999999999999999999999999999976531 


Q ss_pred             ---------------CCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcccC
Q 022103          264 ---------------SHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVK  299 (302)
Q Consensus       264 ---------------~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  299 (302)
                                     ..+|+++|..+++|+. +...+++|+.+..+|+...
T Consensus       219 ~~~~~~~~~~~~~~~~~~p~dvA~~v~~L~s-~~~~~itG~~i~vdgG~~~  268 (269)
T 3gk3_A          219 DVLEAKILPQIPVGRLGRPDEVAALIAFLCS-DDAGFVTGADLAINGGMHM  268 (269)
T ss_dssp             ----CCSGGGCTTSSCBCHHHHHHHHHHHTS-TTCTTCCSCEEEESTTSCC
T ss_pred             hHHHHHhhhcCCcCCccCHHHHHHHHHHHhC-CCcCCeeCcEEEECCCEeC
Confidence                           1479999999999987 6778899999999998654

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=3.5e-40  Score=300.81  Aligned_cols=229  Identities=26%  Similarity=0.325  Sum_probs=204.3

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCC---EEEEEecChhhHHHHHHHHhhC--CCceeEEEeeCCCHHHHHHHHHH
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGL---TVILTARDVERGQRAVESLSEK--GLPVNFFQLDVSDPSSIEAFVSW  100 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~---~V~l~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dlt~~~~~~~~~~~  100 (302)
                      .++++|++|||||++|||+++|++|+++|+   +|++++|+.+++++..+++.+.  +.++.++.+|++|++++++++++
T Consensus        29 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~  108 (287)
T 3rku_A           29 ERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIEN  108 (287)
T ss_dssp             HHHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHT
T ss_pred             hhcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHH
Confidence            458899999999999999999999999998   9999999999999999888764  56789999999999999999999


Q ss_pred             HHhhCCCccEEEEcCCCCC--CCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcc
Q 022103          101 FKSNFAALDILVNNAGVSF--NDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPN  178 (302)
Q Consensus       101 ~~~~~g~id~lv~~aG~~~--~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~  178 (302)
                      +.+.+|++|+||||||...  .++.+.+.++|++++++|+.|+++++++++|.|+++ +.++||++||..+..+.+    
T Consensus       109 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~IV~isS~~~~~~~~----  183 (287)
T 3rku_A          109 LPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAK-NSGDIVNLGSIAGRDAYP----  183 (287)
T ss_dssp             SCGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEEEECCGGGTSCCT----
T ss_pred             HHHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCeEEEECChhhcCCCC----
Confidence            9999999999999999764  357889999999999999999999999999999876 579999999998875533    


Q ss_pred             cccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCC
Q 022103          179 IKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSM  258 (302)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~  258 (302)
                                                            ++.+|++||+|+++|+++|+.|++++||+||+|+||+|+|+|
T Consensus       184 --------------------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~  225 (287)
T 3rku_A          184 --------------------------------------TGSIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEF  225 (287)
T ss_dssp             --------------------------------------TCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSH
T ss_pred             --------------------------------------CCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCcc
Confidence                                                  247899999999999999999999999999999999999998


Q ss_pred             CCC---------------CCCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          259 TQG---------------QGSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       259 ~~~---------------~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                      ...               ....+|+|+|..+++|+. ++..+++|..+..++...
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~p~~pedvA~~v~~l~s-~~~~~i~g~~i~v~~g~~  279 (287)
T 3rku_A          226 SLVRYRGNEEQAKNVYKDTTPLMADDVADLIVYATS-RKQNTVIADTLIFPTNQA  279 (287)
T ss_dssp             HHHHTTTCHHHHHHHHTTSCCEEHHHHHHHHHHHHT-SCTTEEEEEEEEEETTEE
T ss_pred             ccccccCcHHHHHHhhcccCCCCHHHHHHHHHHHhC-CCCCeEecceEEeeCCCC
Confidence            421               123578999999999998 677889999999887754

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=100.00  E-value=4.2e-39  Score=289.12  Aligned_cols=226  Identities=29%  Similarity=0.369  Sum_probs=196.8

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      .++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.+.++.++.+|++|+++++++++++.+.+
T Consensus        25 ~~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~  104 (262)
T 3rkr_A           25 SSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAH  104 (262)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             hccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhc
Confidence            34889999999999999999999999999999999999999999999998888889999999999999999999999999


Q ss_pred             CCccEEEEcCCCC-C-CCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCccccccc
Q 022103          106 AALDILVNNAGVS-F-NDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSIL  183 (302)
Q Consensus       106 g~id~lv~~aG~~-~-~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~  183 (302)
                      +++|+||||||.. . .++.+.+.++|++++++|+.++++++++++|.|.++ +.++||++||..+..+.+         
T Consensus       105 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~~~~---------  174 (262)
T 3rkr_A          105 GRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAA-KRGHIINISSLAGKNPVA---------  174 (262)
T ss_dssp             SCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCCEEEEECSSCSSCCCT---------
T ss_pred             CCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCceEEEEechhhcCCCC---------
Confidence            9999999999984 2 357788999999999999999999999999999887 579999999999875532         


Q ss_pred             chhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC-
Q 022103          184 EDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ-  262 (302)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~-  262 (302)
                                                       ++..|++||+|+++|+++++.|++++||+|++|+||+|+|+|.... 
T Consensus       175 ---------------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~  221 (262)
T 3rkr_A          175 ---------------------------------DGAAYTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVGLS  221 (262)
T ss_dssp             ---------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC---------
T ss_pred             ---------------------------------CCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCcccccc
Confidence                                             2478999999999999999999999999999999999999997653 


Q ss_pred             ------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCC
Q 022103          263 ------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLD  295 (302)
Q Consensus       263 ------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~  295 (302)
                            +..+|+++|..+++|+. ++.....|.+++...
T Consensus       222 ~~~~~~~~~~p~dvA~~v~~l~s-~~~~~~~g~~~i~p~  259 (262)
T 3rkr_A          222 AKKSALGAIEPDDIADVVALLAT-QADQSFISEVLVRPT  259 (262)
T ss_dssp             -------CCCHHHHHHHHHHHHT-CCTTCCEEEEEEECC
T ss_pred             cccccccCCCHHHHHHHHHHHhc-CccccccCcEEeccc
Confidence                  24689999999999997 556667888777654

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=5.9e-40  Score=298.58  Aligned_cols=228  Identities=23%  Similarity=0.270  Sum_probs=201.5

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChh-------hHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHH
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVE-------RGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFV   98 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~-------~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~   98 (302)
                      +++++|+++||||++|||+++|++|+++|++|++++|+.+       .+++..+++.+.+.++.++.+|++|++++++++
T Consensus         5 m~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   84 (285)
T 3sc4_A            5 MSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAV   84 (285)
T ss_dssp             -CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHH
Confidence            5688999999999999999999999999999999999986       467777888777788999999999999999999


Q ss_pred             HHHHhhCCCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCc
Q 022103           99 SWFKSNFAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNP  177 (302)
Q Consensus        99 ~~~~~~~g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~  177 (302)
                      +++.++++++|+||||||+... ++.+.+.++|++++++|+.++++++++++|.|+++ +.++||++||..+..+..   
T Consensus        85 ~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~iv~isS~~~~~~~~---  160 (285)
T 3sc4_A           85 AKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGR-DNPHILTLSPPIRLEPKW---  160 (285)
T ss_dssp             HHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTS-SSCEEEECCCCCCCSGGG---
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEEEECChhhccCCC---
Confidence            9999999999999999998754 67889999999999999999999999999999876 579999999998875431   


Q ss_pred             ccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecC-cccC
Q 022103          178 NIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPG-FTQT  256 (302)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG-~v~T  256 (302)
                                                            +++..|++||+|+++|+++|+.|++++||+||+|+|| ++.|
T Consensus       161 --------------------------------------~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t  202 (285)
T 3sc4_A          161 --------------------------------------LRPTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVAT  202 (285)
T ss_dssp             --------------------------------------SCSHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCC
T ss_pred             --------------------------------------CCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCcccc
Confidence                                                  2237899999999999999999999999999999999 6899


Q ss_pred             CCCCCC--------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          257 SMTQGQ--------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       257 ~~~~~~--------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                      +|.+..        +..+|+++|..+++|+. ++. +++|+++..+|..
T Consensus       203 ~~~~~~~~~~~~~~r~~~pedvA~~~~~l~s-~~~-~~tG~~i~~dgg~  249 (285)
T 3sc4_A          203 AAVQNLLGGDEAMARSRKPEVYADAAYVVLN-KPS-SYTGNTLLCEDVL  249 (285)
T ss_dssp             HHHHHHHTSCCCCTTCBCTHHHHHHHHHHHT-SCT-TCCSCEEEHHHHH
T ss_pred             HHHHhhccccccccCCCCHHHHHHHHHHHhC-Ccc-cccceEEEEcCch
Confidence            875431        33689999999999997 444 8999999888753

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.9e-39  Score=290.47  Aligned_cols=226  Identities=23%  Similarity=0.265  Sum_probs=187.9

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      +++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++   +.++.++.+|++|+++++++++++.+++
T Consensus         3 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   79 (257)
T 3tpc_A            3 MQLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAEL---GAAVRFRNADVTNEADATAALAFAKQEF   79 (257)
T ss_dssp             -CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC---------------CEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---CCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            4688999999999999999999999999999999999998887777766   3578999999999999999999999999


Q ss_pred             CCccEEEEcCCCCCC-CC----CCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcC-----CCCCcEEEecCCCccccccc
Q 022103          106 AALDILVNNAGVSFN-DI----YKNTVEHAETVIRTNFYGAKLLTESLLPLFRRS-----PSKSRILNISSRLGTLSKVR  175 (302)
Q Consensus       106 g~id~lv~~aG~~~~-~~----~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~-----~~~~~iv~vsS~~~~~~~~~  175 (302)
                      |++|+||||||.... .+    .+.+.++|++++++|+.++++++++++|.|.++     ...++||++||..+..+.+ 
T Consensus        80 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~~~-  158 (257)
T 3tpc_A           80 GHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQI-  158 (257)
T ss_dssp             SCCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCT-
T ss_pred             CCCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccCCC-
Confidence            999999999998754 22    367899999999999999999999999999874     2468999999998875533 


Q ss_pred             CcccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCccc
Q 022103          176 NPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQ  255 (302)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~  255 (302)
                                                               ++.+|++||+|++.|+++++.|++++||+||+|+||+|+
T Consensus       159 -----------------------------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~  197 (257)
T 3tpc_A          159 -----------------------------------------GQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFD  197 (257)
T ss_dssp             -----------------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBS
T ss_pred             -----------------------------------------CCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCC
Confidence                                                     247899999999999999999999999999999999999


Q ss_pred             CCCCCCC----------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcccC
Q 022103          256 TSMTQGQ----------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVK  299 (302)
Q Consensus       256 T~~~~~~----------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  299 (302)
                      |+|....                +..+|+++|..+++|+. +  .+++|+.+..+|+...
T Consensus       198 t~~~~~~~~~~~~~~~~~~p~~~r~~~~~dva~~v~~l~s-~--~~itG~~i~vdGG~~~  254 (257)
T 3tpc_A          198 TPMMAGMPQDVQDALAASVPFPPRLGRAEEYAALVKHICE-N--TMLNGEVIRLDGALRM  254 (257)
T ss_dssp             CC--------------CCSSSSCSCBCHHHHHHHHHHHHH-C--TTCCSCEEEESTTCCC
T ss_pred             ChhhccCCHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHcc-c--CCcCCcEEEECCCccC
Confidence            9986532                23579999999999997 3  6799999999998654

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=100.00  E-value=1.7e-39  Score=296.93  Aligned_cols=229  Identities=26%  Similarity=0.239  Sum_probs=201.5

Q ss_pred             cccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecCh--hhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHH
Q 022103           25 KWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDV--ERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFK  102 (302)
Q Consensus        25 ~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~--~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~  102 (302)
                      ..++++|++|||||++|||+++|++|+++|++|++++|+.  +..+...+.+.+.+.++.++.+|++|+++++++++++.
T Consensus        44 ~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~  123 (294)
T 3r3s_A           44 SGRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAR  123 (294)
T ss_dssp             CSTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHH
Confidence            4568999999999999999999999999999999999873  45666777777777889999999999999999999999


Q ss_pred             hhCCCccEEEEcCCCCC--CCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccc
Q 022103          103 SNFAALDILVNNAGVSF--NDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIK  180 (302)
Q Consensus       103 ~~~g~id~lv~~aG~~~--~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~  180 (302)
                      ++++++|+||||||...  .++.+.+.++|++++++|+.++++++++++|.|.+   .++||++||..+..+.+      
T Consensus       124 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~---~g~Iv~isS~~~~~~~~------  194 (294)
T 3r3s_A          124 EALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPK---GASIITTSSIQAYQPSP------  194 (294)
T ss_dssp             HHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCT---TCEEEEECCGGGTSCCT------
T ss_pred             HHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc---CCEEEEECChhhccCCC------
Confidence            99999999999999854  35788999999999999999999999999999864   48999999998875532      


Q ss_pred             cccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCC
Q 022103          181 SILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ  260 (302)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~  260 (302)
                                                          ++..|++||+|+++|+++|+.|++++||+||+|+||+|+|+|..
T Consensus       195 ------------------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~  238 (294)
T 3r3s_A          195 ------------------------------------HLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQI  238 (294)
T ss_dssp             ------------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHH
T ss_pred             ------------------------------------CchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCcccccc
Confidence                                                24789999999999999999999999999999999999998721


Q ss_pred             C-----------------CCCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcccC
Q 022103          261 G-----------------QGSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVK  299 (302)
Q Consensus       261 ~-----------------~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  299 (302)
                      .                 .+..+|+++|..+++|++ +...+++|+++..+|+...
T Consensus       239 ~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~L~s-~~~~~itG~~i~vdGG~~l  293 (294)
T 3r3s_A          239 SGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLAS-QESSYVTAEVHGVCGGEHL  293 (294)
T ss_dssp             TTTSCGGGSTTTTTTSTTSSCBCGGGGHHHHHHHHS-GGGTTCCSCEEEESTTCCC
T ss_pred             ccCCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC-ccccCCCCCEEEECCCccC
Confidence            1                 023679999999999997 6778899999999998654

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=100.00  E-value=4.2e-39  Score=293.92  Aligned_cols=228  Identities=22%  Similarity=0.252  Sum_probs=200.6

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhh-HHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhh
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVER-GQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSN  104 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~-~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~  104 (302)
                      .++++|++|||||++|||+++|++|+++|++|++++|+.++ .+...+.+.+.+.++.++.+|++|+++++++++++.++
T Consensus        43 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  122 (291)
T 3ijr_A           43 EKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQ  122 (291)
T ss_dssp             STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999998764 45555666667788999999999999999999999999


Q ss_pred             CCCccEEEEcCCCCCC--CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccc
Q 022103          105 FAALDILVNNAGVSFN--DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSI  182 (302)
Q Consensus       105 ~g~id~lv~~aG~~~~--~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~  182 (302)
                      ++++|+||||||....  ++.+.+.++|++++++|+.++++++++++|.|++   .++||++||..+..+.+.       
T Consensus       123 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~---~g~iv~isS~~~~~~~~~-------  192 (291)
T 3ijr_A          123 LGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQ---GDVIINTASIVAYEGNET-------  192 (291)
T ss_dssp             HSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCT---TCEEEEECCTHHHHCCTT-------
T ss_pred             cCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhh---CCEEEEEechHhcCCCCC-------
Confidence            9999999999997643  5778899999999999999999999999999864   489999999988755322       


Q ss_pred             cchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCC-
Q 022103          183 LEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG-  261 (302)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~-  261 (302)
                                                         +.+|++||+|+++|+++|+.|++++||+||+|+||+|+|+|... 
T Consensus       193 -----------------------------------~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~  237 (291)
T 3ijr_A          193 -----------------------------------LIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSS  237 (291)
T ss_dssp             -----------------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHHH
T ss_pred             -----------------------------------ChhHHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCccccc
Confidence                                               37899999999999999999999999999999999999998432 


Q ss_pred             ---------------CCCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcccC
Q 022103          262 ---------------QGSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVK  299 (302)
Q Consensus       262 ---------------~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  299 (302)
                                     .+..+|+|+|..+++|++ +...+++|+++..+|+...
T Consensus       238 ~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~L~s-~~~~~itG~~i~vdGG~~~  289 (291)
T 3ijr_A          238 FDEKKVSQFGSNVPMQRPGQPYELAPAYVYLAS-SDSSYVTGQMIHVNGGVIV  289 (291)
T ss_dssp             SCHHHHHHTTTTSTTSSCBCGGGTHHHHHHHHS-GGGTTCCSCEEEESSSCCC
T ss_pred             CCHHHHHHHHccCCCCCCcCHHHHHHHHHHHhC-CccCCCcCCEEEECCCccc
Confidence                           123589999999999997 6778899999999998653

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=100.00  E-value=1.1e-39  Score=293.75  Aligned_cols=227  Identities=21%  Similarity=0.237  Sum_probs=200.2

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhC--CCceeEEEeeCCCHHHHHHHHHHHHh
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEK--GLPVNFFQLDVSDPSSIEAFVSWFKS  103 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dlt~~~~~~~~~~~~~~  103 (302)
                      +.+++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.  +..+.++.+|++++++++++++    
T Consensus         6 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~----   81 (267)
T 3t4x_A            6 MQLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIE----   81 (267)
T ss_dssp             CCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHH----
T ss_pred             cccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHH----
Confidence            5688999999999999999999999999999999999999999998888765  3467889999999999887765    


Q ss_pred             hCCCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccc
Q 022103          104 NFAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSI  182 (302)
Q Consensus       104 ~~g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~  182 (302)
                      +++++|+||||||.... ++.+.+.++|++++++|+.++++++++++|.|.++ +.++||++||..+..+.+        
T Consensus        82 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~~--------  152 (267)
T 3t4x_A           82 KYPKVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIER-KEGRVIFIASEAAIMPSQ--------  152 (267)
T ss_dssp             HCCCCSEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TEEEEEEECCGGGTSCCT--------
T ss_pred             hcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCCEEEEEcchhhccCCC--------
Confidence            46899999999998754 57889999999999999999999999999999887 579999999998875532        


Q ss_pred             cchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCC-
Q 022103          183 LEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG-  261 (302)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~-  261 (302)
                                                        ++.+|++||+|+++|+++++.|++++||+||+|+||+++|++... 
T Consensus       153 ----------------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~  198 (267)
T 3t4x_A          153 ----------------------------------EMAHYSATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVETM  198 (267)
T ss_dssp             ----------------------------------TCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHHHHH
T ss_pred             ----------------------------------cchHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCccHHHH
Confidence                                              247899999999999999999999999999999999999985321 


Q ss_pred             -----------------------------CCCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcccCC
Q 022103          262 -----------------------------QGSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVKS  300 (302)
Q Consensus       262 -----------------------------~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~  300 (302)
                                                   .+..+|+|+|..+++|++ +...+++|+.+..+|+...+
T Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~fL~s-~~~~~itG~~i~vdGG~~~s  265 (267)
T 3t4x_A          199 LNSLYPNEQLTIEEAEKRFMKENRPTSIIQRLIRPEEIAHLVTFLSS-PLSSAINGSALRIDGGLVRS  265 (267)
T ss_dssp             HHHSSTTSCCCHHHHHHHHHHHHCTTCSSCSCBCTHHHHHHHHHHHS-GGGTTCCSCEEEESTTCSCS
T ss_pred             HhhcCcccCCCHHHHHHHHhhccCCcccccCccCHHHHHHHHHHHcC-ccccCccCCeEEECCCcccc
Confidence                                         123679999999999997 67788999999999987654

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.9e-39  Score=294.92  Aligned_cols=229  Identities=23%  Similarity=0.260  Sum_probs=193.0

Q ss_pred             cccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCc-eeEEEeeCCCHHHHHHHHHHHHh
Q 022103           25 KWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLP-VNFFQLDVSDPSSIEAFVSWFKS  103 (302)
Q Consensus        25 ~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~-~~~~~~Dlt~~~~~~~~~~~~~~  103 (302)
                      ..+++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.+.. +.++.+|++|+++++++++++.+
T Consensus        28 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  107 (281)
T 4dry_A           28 KGSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRA  107 (281)
T ss_dssp             ------CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            45689999999999999999999999999999999999999999988888765444 48999999999999999999999


Q ss_pred             hCCCccEEEEcCCCCC--CCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCC-CCCcEEEecCCCcccccccCcccc
Q 022103          104 NFAALDILVNNAGVSF--NDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSP-SKSRILNISSRLGTLSKVRNPNIK  180 (302)
Q Consensus       104 ~~g~id~lv~~aG~~~--~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~-~~~~iv~vsS~~~~~~~~~~~~~~  180 (302)
                      ++|++|+||||||...  .++.+.+.++|++++++|+.++++++++++|.|.++. ..++||++||..+..+.+      
T Consensus       108 ~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~------  181 (281)
T 4dry_A          108 EFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPRP------  181 (281)
T ss_dssp             HHSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCCCT------
T ss_pred             HcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCCCC------
Confidence            9999999999999864  3578899999999999999999999999999998863 268999999998875532      


Q ss_pred             cccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCC
Q 022103          181 SILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ  260 (302)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~  260 (302)
                                                          ++..|++||+|+++|+++++.|++++||+||+|+||+|+|+|..
T Consensus       182 ------------------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~  225 (281)
T 4dry_A          182 ------------------------------------NSAPYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTA  225 (281)
T ss_dssp             ------------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC----
T ss_pred             ------------------------------------CChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhh
Confidence                                                24789999999999999999999999999999999999999976


Q ss_pred             CC--------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCC
Q 022103          261 GQ--------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLD  295 (302)
Q Consensus       261 ~~--------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~  295 (302)
                      ..              +..+|+|+|..+++|++.+....+.+..+....
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~pedvA~~v~fL~s~~~~~~i~~~~i~p~~  274 (281)
T 4dry_A          226 RMSTGVLQANGEVAAEPTIPIEHIAEAVVYMASLPLSANVLTMTVMATR  274 (281)
T ss_dssp             ---CEEECTTSCEEECCCBCHHHHHHHHHHHHHSCTTEEEEEEEEEETT
T ss_pred             hhcchhhhhhhcccccCCCCHHHHHHHHHHHhCCCccCccccEEEEecc
Confidence            43              236899999999999987776666666665444

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=100.00  E-value=3.2e-39  Score=289.40  Aligned_cols=229  Identities=27%  Similarity=0.359  Sum_probs=203.8

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      +++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++...+.++.++.+|++|+++++++++++.+.+
T Consensus         5 ~~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (260)
T 2ae2_A            5 WNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHF   84 (260)
T ss_dssp             TCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            56889999999999999999999999999999999999999888888887777788999999999999999999999999


Q ss_pred             -CCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCccccccc
Q 022103          106 -AALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSIL  183 (302)
Q Consensus       106 -g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~  183 (302)
                       +++|+||||||.... ++.+.+.++|++++++|+.++++++++++|.|.++ +.++||++||..+..+.+         
T Consensus        85 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~~---------  154 (260)
T 2ae2_A           85 HGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKAS-ERGNVVFISSVSGALAVP---------  154 (260)
T ss_dssp             TTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-SSEEEEEECCGGGTSCCT---------
T ss_pred             CCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEEcchhhccCCC---------
Confidence             899999999998654 56788999999999999999999999999999876 568999999988765432         


Q ss_pred             chhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCC--
Q 022103          184 EDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG--  261 (302)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~--  261 (302)
                                                       ++..|++||++++.++++++.|++++||+||+|+||+++|+|...  
T Consensus       155 ---------------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~  201 (260)
T 2ae2_A          155 ---------------------------------YEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTI  201 (260)
T ss_dssp             ---------------------------------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHT
T ss_pred             ---------------------------------CcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhhc
Confidence                                             236899999999999999999999999999999999999987421  


Q ss_pred             ------------------CCCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          262 ------------------QGSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       262 ------------------~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                                        ....+|+++|..+++|+. +...+++|+++..+|+..
T Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l~s-~~~~~~tG~~~~vdgG~~  255 (260)
T 2ae2_A          202 QDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCF-PAASYVTGQIIYVDGGLM  255 (260)
T ss_dssp             TSHHHHHHHHHHHHTSTTCSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGG
T ss_pred             cChhhHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcC-ccccCCCCCEEEECCCcc
Confidence                              123589999999999987 566789999999999854

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=100.00  E-value=1.3e-39  Score=290.63  Aligned_cols=231  Identities=26%  Similarity=0.309  Sum_probs=203.3

Q ss_pred             ccccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEe-cChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHH
Q 022103           24 TKWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTA-RDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFK  102 (302)
Q Consensus        24 ~~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~-r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~  102 (302)
                      .....++|++|||||++|||+++|++|+++|++|++++ |+.++.+...+++.+.+.++.++.+|++|.++++++++++.
T Consensus         7 ~~~~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   86 (256)
T 3ezl_A            7 HHMVMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVK   86 (256)
T ss_dssp             ------CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHH
Confidence            34568899999999999999999999999999999988 66777788888888778889999999999999999999999


Q ss_pred             hhCCCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCccccc
Q 022103          103 SNFAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKS  181 (302)
Q Consensus       103 ~~~g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~  181 (302)
                      +.++++|+||||||.... ++.+.+.++|++++++|+.++++++++++|.|.++ ..++||++||..+..+.+       
T Consensus        87 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~~~~-------  158 (256)
T 3ezl_A           87 AEVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVER-GWGRIINISSVNGQKGQF-------  158 (256)
T ss_dssp             HHTCCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCCCGGGSCS-------
T ss_pred             HhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCEEEEEcchhhccCCC-------
Confidence            999999999999998754 57889999999999999999999999999999887 569999999998876543       


Q ss_pred             ccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCC
Q 022103          182 ILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG  261 (302)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~  261 (302)
                                                         ++..|++||+|++.|+++++.|++++||+|++|+||+++|+|.+.
T Consensus       159 -----------------------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~  203 (256)
T 3ezl_A          159 -----------------------------------GQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKA  203 (256)
T ss_dssp             -----------------------------------CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT
T ss_pred             -----------------------------------CCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCccccc
Confidence                                               247899999999999999999999999999999999999998765


Q ss_pred             C---------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          262 Q---------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       262 ~---------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                      .               ...+|+++|..+++|+. +...+++|+++..+|+..
T Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s-~~~~~~tG~~i~vdgG~~  254 (256)
T 3ezl_A          204 IRPDVLEKIVATIPVRRLGSPDEIGSIVAWLAS-EESGFSTGADFSLNGGLH  254 (256)
T ss_dssp             SCHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTSC
T ss_pred             cCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC-CcccCCcCcEEEECCCEe
Confidence            3               23589999999999987 567789999999999865

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=100.00  E-value=1.4e-38  Score=290.30  Aligned_cols=266  Identities=40%  Similarity=0.660  Sum_probs=219.8

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCC-CceeEEEeeCCCH-HHHHHHHHHHHhh
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKG-LPVNFFQLDVSDP-SSIEAFVSWFKSN  104 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dlt~~-~~~~~~~~~~~~~  104 (302)
                      .+++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.+ .++.++.+|++|. ++++++++++.+.
T Consensus         9 ~~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~   88 (311)
T 3o26_A            9 VTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTH   88 (311)
T ss_dssp             ---CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             cCCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHh
Confidence            4679999999999999999999999999999999999999999999987765 4789999999998 9999999999999


Q ss_pred             CCCccEEEEcCCCCCC-------------------------------CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhh
Q 022103          105 FAALDILVNNAGVSFN-------------------------------DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFR  153 (302)
Q Consensus       105 ~g~id~lv~~aG~~~~-------------------------------~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~  153 (302)
                      ++++|+||||||+...                               .+.+.+.+++++++++|+.|+++++++++|.|.
T Consensus        89 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~  168 (311)
T 3o26_A           89 FGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQ  168 (311)
T ss_dssp             HSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhHhhc
Confidence            9999999999998632                               345678999999999999999999999999998


Q ss_pred             cCCCCCcEEEecCCCcccccccCc-ccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHH
Q 022103          154 RSPSKSRILNISSRLGTLSKVRNP-NIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYT  232 (302)
Q Consensus       154 ~~~~~~~iv~vsS~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~  232 (302)
                      ++ ..++||++||..+..+..... ......+.+.+....+......+....+.+.....++|+++.+|++||+|++.|+
T Consensus       169 ~~-~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~  247 (311)
T 3o26_A          169 LS-DSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAYT  247 (311)
T ss_dssp             TS-SSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHHHHHHHH
T ss_pred             cC-CCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHHHHHHHH
Confidence            76 578999999999887653211 1111223344555555555555555556666666777778899999999999999


Q ss_pred             HHHHHHccCCCcEEEEeecCcccCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCc
Q 022103          233 MVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTADEAADVGARLLLLHPQQLPTAKFYIGLDP  296 (302)
Q Consensus       233 ~~la~e~~~~gI~V~~v~PG~v~T~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  296 (302)
                      ++|+.++.  +|+||+|+||+|+|+|.+..+..++++.+..+++++.. +.+..+|.+|++.+.
T Consensus       248 ~~la~e~~--~i~v~~v~PG~v~T~~~~~~~~~~~~~~a~~~~~~~~~-~~~~~~g~~~~~s~~  308 (311)
T 3o26_A          248 RVLANKIP--KFQVNCVCPGLVKTEMNYGIGNYTAEEGAEHVVRIALF-PDDGPSGFFYDCSEL  308 (311)
T ss_dssp             HHHHHHCT--TSEEEEECCCSBCSGGGTTCCSBCHHHHHHHHHHHHTC-CSSCCCSCEETC---
T ss_pred             HHHHhhcC--CceEEEecCCceecCCcCCCCCCCHHHHHHHHHHHHhC-CCCCCCceEeccccc
Confidence            99999985  49999999999999999988888999999999999874 557788999887654

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=100.00  E-value=2.5e-39  Score=288.42  Aligned_cols=227  Identities=24%  Similarity=0.281  Sum_probs=183.2

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      +++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.+.++.++.+|++|+++++++++++.+.+
T Consensus         5 ~~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (253)
T 3qiv_A            5 MRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEF   84 (253)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            56789999999999999999999999999999999999999999999998888889999999999999999999999999


Q ss_pred             CCccEEEEcCCCCC---C-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCccccc
Q 022103          106 AALDILVNNAGVSF---N-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKS  181 (302)
Q Consensus       106 g~id~lv~~aG~~~---~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~  181 (302)
                      +++|+||||||...   . .+.+.+.++|++++++|+.++++++++++|.|.++ ..++||++||..+..+         
T Consensus        85 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~---------  154 (253)
T 3qiv_A           85 GGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKR-GGGAIVNQSSTAAWLY---------  154 (253)
T ss_dssp             SCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TCEEEEEECC---------------
T ss_pred             CCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-CCCEEEEECCccccCC---------
Confidence            99999999999842   2 46788999999999999999999999999999887 5799999999887521         


Q ss_pred             ccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCC
Q 022103          182 ILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG  261 (302)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~  261 (302)
                                                          ...|++||++++.|+++++.|++++||+|++|+||+++|++.+.
T Consensus       155 ------------------------------------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~  198 (253)
T 3qiv_A          155 ------------------------------------SNYYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRT  198 (253)
T ss_dssp             -----------------------------------------CCHHHHHHHHHHHHHHTTTTTEEEEEEEC----------
T ss_pred             ------------------------------------CchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhh
Confidence                                                25699999999999999999999999999999999999998654


Q ss_pred             CC----------------CCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcccC
Q 022103          262 QG----------------SHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVK  299 (302)
Q Consensus       262 ~~----------------~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  299 (302)
                      ..                ..+|+++|..+++++. +...+++|++|..+++...
T Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s-~~~~~~tG~~~~vdgG~~~  251 (253)
T 3qiv_A          199 TTPKEMVDDIVKGLPLSRMGTPDDLVGMCLFLLS-DEASWITGQIFNVDGGQII  251 (253)
T ss_dssp             ---------------------CCHHHHHHHHHHS-GGGTTCCSCEEEC------
T ss_pred             cCcHHHHHHHhccCCCCCCCCHHHHHHHHHHHcC-ccccCCCCCEEEECCCeec
Confidence            31                2468999999999987 5677899999999998654

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=100.00  E-value=2.2e-39  Score=291.60  Aligned_cols=230  Identities=25%  Similarity=0.236  Sum_probs=202.6

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhC--CCceeEEEeeCCCHHHHHHHHHHHHh
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEK--GLPVNFFQLDVSDPSSIEAFVSWFKS  103 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dlt~~~~~~~~~~~~~~  103 (302)
                      .++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.  +.++.++.+|++|+++++++++++.+
T Consensus         9 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   88 (267)
T 1iy8_A            9 TRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTE   88 (267)
T ss_dssp             -CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999999888888887654  56789999999999999999999999


Q ss_pred             hCCCccEEEEcCCCCCC--CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCccccc
Q 022103          104 NFAALDILVNNAGVSFN--DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKS  181 (302)
Q Consensus       104 ~~g~id~lv~~aG~~~~--~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~  181 (302)
                      .++++|+||||||....  ++.+.+.++|++++++|+.++++++++++|.|.++ +.++||++||..+..+.+       
T Consensus        89 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~~-------  160 (267)
T 1iy8_A           89 RFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQ-GSGMVVNTASVGGIRGIG-------  160 (267)
T ss_dssp             HHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEEEECCGGGTSBCS-------
T ss_pred             HcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCCEEEEEcchhhccCCC-------
Confidence            99999999999997643  56788999999999999999999999999999876 469999999988865432       


Q ss_pred             ccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCC
Q 022103          182 ILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG  261 (302)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~  261 (302)
                                                         ++..|++||++++.++++++.|++++||+||+|+||+++|+|...
T Consensus       161 -----------------------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~  205 (267)
T 1iy8_A          161 -----------------------------------NQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVEN  205 (267)
T ss_dssp             -----------------------------------SBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHH
T ss_pred             -----------------------------------CCccHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhc
Confidence                                               247899999999999999999999999999999999999987321


Q ss_pred             -----------------------CCCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcccC
Q 022103          262 -----------------------QGSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVK  299 (302)
Q Consensus       262 -----------------------~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  299 (302)
                                             .+..+|+++|..+++|+. ++..+++|+++..+|+...
T Consensus       206 ~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dvA~~v~~l~s-~~~~~~tG~~i~vdGG~~~  265 (267)
T 1iy8_A          206 SMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVVAFLLS-DDASYVNATVVPIDGGQSA  265 (267)
T ss_dssp             HHHHHCTTCHHHHHHHHHTTCTTCSCBCHHHHHHHHHHHTS-GGGTTCCSCEEEESTTTTT
T ss_pred             cccccChhhhhhHHHHHhccCCCCCCcCHHHHHHHHHHHcC-ccccCCCCCEEEECCCccc
Confidence                                   012489999999999986 5677899999999998653

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=100.00  E-value=6.9e-39  Score=287.53  Aligned_cols=230  Identities=28%  Similarity=0.318  Sum_probs=203.3

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhC-CCceeEEEeeCCCHHHHHHHHHHHHhh
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEK-GLPVNFFQLDVSDPSSIEAFVSWFKSN  104 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dlt~~~~~~~~~~~~~~~  104 (302)
                      +++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+. +.++.++.+|++|+++++++++++.+.
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   82 (263)
T 3ai3_A            3 MGISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSS   82 (263)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999998888888887654 567899999999999999999999999


Q ss_pred             CCCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCccccccc
Q 022103          105 FAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSIL  183 (302)
Q Consensus       105 ~g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~  183 (302)
                      ++++|+||||||.... ++.+.+.++|++++++|+.++++++++++|.|.++ +.++||++||..+..+.+         
T Consensus        83 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~~---------  152 (263)
T 3ai3_A           83 FGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRAR-GGGAIIHNASICAVQPLW---------  152 (263)
T ss_dssp             HSSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTSCCT---------
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEEEECchhhcCCCC---------
Confidence            9999999999998654 57788999999999999999999999999999876 469999999988865432         


Q ss_pred             chhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCC---
Q 022103          184 EDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ---  260 (302)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~---  260 (302)
                                                       ++..|++||++++.++++++.|++++||+||+|+||+++|++..   
T Consensus       153 ---------------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~  199 (263)
T 3ai3_A          153 ---------------------------------YEPIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKTA  199 (263)
T ss_dssp             ---------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHH
T ss_pred             ---------------------------------CcchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhhhh
Confidence                                             23679999999999999999999999999999999999998632   


Q ss_pred             -----------------------CC-CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcccC
Q 022103          261 -----------------------GQ-GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVK  299 (302)
Q Consensus       261 -----------------------~~-~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  299 (302)
                                             +. ...+|+++|..+++|+. ++..+++|++|..+++...
T Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s-~~~~~~~G~~~~vdgG~~~  261 (263)
T 3ai3_A          200 KELTKDNGGDWKGYLQSVADEHAPIKRFASPEELANFFVFLCS-ERATYSVGSAYFVDGGMLK  261 (263)
T ss_dssp             HHHTTTTTCCHHHHHHHHHHHHCTTCSCBCHHHHHHHHHHHTS-TTCTTCCSCEEEESTTCCC
T ss_pred             HhhhcccCCcHHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHcC-ccccCCCCcEEEECCCccc
Confidence                                   11 23689999999999987 6677899999999988643

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=100.00  E-value=4.2e-39  Score=288.61  Aligned_cols=227  Identities=24%  Similarity=0.343  Sum_probs=197.8

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhh-HHHHHHHHhhC-CCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVER-GQRAVESLSEK-GLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~-~~~~~~~l~~~-~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      +++|+++||||++|||+++|++|+++|++|++++|+.++ +++..+++.+. +.++.++.+|++|+++++++++++.+.+
T Consensus         2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   81 (260)
T 1x1t_A            2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            578999999999999999999999999999999999887 88887777654 5678899999999999999999999999


Q ss_pred             CCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccc
Q 022103          106 AALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILE  184 (302)
Q Consensus       106 g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~  184 (302)
                      +++|+||||||.... ++.+.+.++|++++++|+.++++++++++|.|.++ +.++||++||..+..+.+          
T Consensus        82 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~~----------  150 (260)
T 1x1t_A           82 GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQ-GFGRIINIASAHGLVASA----------  150 (260)
T ss_dssp             SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTSCCT----------
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCEEEEECcHHhCcCCC----------
Confidence            999999999998654 56788999999999999999999999999999876 469999999988865432          


Q ss_pred             hhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC--
Q 022103          185 DEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ--  262 (302)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~--  262 (302)
                                                      ++..|++||++++.|+++++.|++++||+||+|+||+++|+|....  
T Consensus       151 --------------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~  198 (260)
T 1x1t_A          151 --------------------------------NKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQIS  198 (260)
T ss_dssp             --------------------------------TCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC--------
T ss_pred             --------------------------------CCchHHHHHHHHHHHHHHHHHHhccCCEEEEEEeecCccCchHHHhhh
Confidence                                            2378999999999999999999999999999999999999985431  


Q ss_pred             -------------------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          263 -------------------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       263 -------------------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                                               ...+|+++|..+++|+. +...+++|+++..+|+..
T Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dva~~~~~l~s-~~~~~~tG~~~~vdgG~~  258 (260)
T 1x1t_A          199 ALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLAS-DAAAQITGTTVSVDGGWT  258 (260)
T ss_dssp             ----------------CHHHHCTTCCCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGG
T ss_pred             hhccccCCchHHHHHHHhhccCCCCCCcCHHHHHHHHHHHhC-hhhcCCCCCEEEECCCcc
Confidence                                     12479999999999987 566789999999998854

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=100.00  E-value=5.1e-39  Score=286.51  Aligned_cols=225  Identities=26%  Similarity=0.324  Sum_probs=192.5

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecCh-hhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDV-ERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~-~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      ++++|+++||||++|||+++|++|+++|++|++++|+. +++++   ++.+.+.++.++.+|++|+++++++++++.+.+
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~---~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (249)
T 2ew8_A            4 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEA---AIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTF   80 (249)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHH---HHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHH---HHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHc
Confidence            47899999999999999999999999999999999998 66655   344446688999999999999999999999999


Q ss_pred             CCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccc
Q 022103          106 AALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILE  184 (302)
Q Consensus       106 g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~  184 (302)
                      +++|+||||||.... ++.+.+.++|++++++|+.++++++++++|.|.++ +.++||++||..+..+.+          
T Consensus        81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~~----------  149 (249)
T 2ew8_A           81 GRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRN-GWGRIINLTSTTYWLKIE----------  149 (249)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGGSCCS----------
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCeEEEEEcchhhccCCC----------
Confidence            999999999998654 56788999999999999999999999999999876 469999999988865432          


Q ss_pred             hhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCC-CC-
Q 022103          185 DEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ-GQ-  262 (302)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~-~~-  262 (302)
                                                      ++..|++||++++.++++++.|++++||+||+|+||+++|+|.. .. 
T Consensus       150 --------------------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~  197 (249)
T 2ew8_A          150 --------------------------------AYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASAL  197 (249)
T ss_dssp             --------------------------------SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC----------
T ss_pred             --------------------------------CchhHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccchhccc
Confidence                                            24789999999999999999999999999999999999999865 21 


Q ss_pred             ---------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          263 ---------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       263 ---------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                                     ...+|+++|..+++|+. +...+++|+++..+|+..
T Consensus       198 ~~~~~~~~~~~~~~~~~~~p~dva~~~~~l~s-~~~~~~tG~~~~vdGG~~  247 (249)
T 2ew8_A          198 SAMFDVLPNMLQAIPRLQVPLDLTGAAAFLAS-DDASFITGQTLAVDGGMV  247 (249)
T ss_dssp             --------CTTSSSCSCCCTHHHHHHHHHHTS-GGGTTCCSCEEEESSSCC
T ss_pred             cchhhHHHHhhCccCCCCCHHHHHHHHHHHcC-cccCCCCCcEEEECCCcc
Confidence                           12579999999999987 567789999999998854

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=5.5e-39  Score=291.01  Aligned_cols=229  Identities=31%  Similarity=0.349  Sum_probs=202.3

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      +++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.+ ++.++.+|++|+++++++++++.+.+
T Consensus        25 ~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~  103 (276)
T 2b4q_A           25 FSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYG-DCQAIPADLSSEAGARRLAQALGELS  103 (276)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSS-CEEECCCCTTSHHHHHHHHHHHHHHC
T ss_pred             cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-ceEEEEeeCCCHHHHHHHHHHHHHhc
Confidence            45889999999999999999999999999999999999998888888887655 78899999999999999999999999


Q ss_pred             CCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCC---CCcEEEecCCCcccccccCccccc
Q 022103          106 AALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPS---KSRILNISSRLGTLSKVRNPNIKS  181 (302)
Q Consensus       106 g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~---~~~iv~vsS~~~~~~~~~~~~~~~  181 (302)
                      +++|+||||||.... ++.+.+.++|++++++|+.++++++++++|.|.+++.   .++||++||..+..+.+.      
T Consensus       104 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~~~------  177 (276)
T 2b4q_A          104 ARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMGE------  177 (276)
T ss_dssp             SCCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCCCC------
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCCCC------
Confidence            999999999998654 5778899999999999999999999999999987522   289999999887654322      


Q ss_pred             ccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccc-cchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCC
Q 022103          182 ILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWT-DYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ  260 (302)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~  260 (302)
                                                          .. .|++||++++.|+++++.|++++||+||+|+||+++|+|..
T Consensus       178 ------------------------------------~~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~  221 (276)
T 2b4q_A          178 ------------------------------------QAYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTR  221 (276)
T ss_dssp             ------------------------------------SCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTH
T ss_pred             ------------------------------------CccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchh
Confidence                                                24 79999999999999999999999999999999999999853


Q ss_pred             C-----------------CCCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          261 G-----------------QGSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       261 ~-----------------~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                      .                 .+..+|+++|..+++|+. ++..+++|+++..+|+..
T Consensus       222 ~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s-~~~~~~tG~~i~vdGG~~  275 (276)
T 2b4q_A          222 HIANDPQALEADSASIPMGRWGRPEEMAALAISLAG-TAGAYMTGNVIPIDGGFH  275 (276)
T ss_dssp             HHHHCHHHHHHHHHTSTTSSCCCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTTT
T ss_pred             hcchhHHHHHHhhcCCCCCCcCCHHHHHHHHHHHhC-ccccCCCCCEEEeCCCcc
Confidence            2                 123589999999999987 567789999999998853

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=100.00  E-value=1e-38  Score=291.96  Aligned_cols=228  Identities=18%  Similarity=0.169  Sum_probs=200.2

Q ss_pred             cccccCcEEEEeCCCc--hHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHH
Q 022103           25 KWWSKETIAIVTGANK--GIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFK  102 (302)
Q Consensus        25 ~~~~~~k~vlItGas~--gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~  102 (302)
                      ...+++|++|||||+|  |||+++|++|+++|++|++++|+.+..+...+.+.+.+ .+.++.+|++|+++++++++++.
T Consensus        25 ~~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~  103 (296)
T 3k31_A           25 GMLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLG-VKLTVPCDVSDAESVDNMFKVLA  103 (296)
T ss_dssp             CCTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHT-CCEEEECCTTCHHHHHHHHHHHH
T ss_pred             hhccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcC-CeEEEEcCCCCHHHHHHHHHHHH
Confidence            4568999999999997  99999999999999999999999766555544444333 57899999999999999999999


Q ss_pred             hhCCCccEEEEcCCCCC-----CCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCc
Q 022103          103 SNFAALDILVNNAGVSF-----NDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNP  177 (302)
Q Consensus       103 ~~~g~id~lv~~aG~~~-----~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~  177 (302)
                      +++|++|+||||||+..     .++.+.+.++|++++++|+.++++++++++|.|.+   .++||++||..+..+.+   
T Consensus       104 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~---~g~IV~isS~~~~~~~~---  177 (296)
T 3k31_A          104 EEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTN---GGSILTLSYYGAEKVVP---  177 (296)
T ss_dssp             HHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT---CEEEEEEECGGGTSCCT---
T ss_pred             HHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc---CCEEEEEEehhhccCCC---
Confidence            99999999999999875     45778999999999999999999999999999875   58999999988875532   


Q ss_pred             ccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCC
Q 022103          178 NIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTS  257 (302)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~  257 (302)
                                                             ++..|++||+|+++|+++|+.|++++||+||+|+||+|+|+
T Consensus       178 ---------------------------------------~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~  218 (296)
T 3k31_A          178 ---------------------------------------HYNVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTL  218 (296)
T ss_dssp             ---------------------------------------TTTHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCS
T ss_pred             ---------------------------------------CchhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCc
Confidence                                                   24789999999999999999999999999999999999999


Q ss_pred             CCCCC-----------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcccC
Q 022103          258 MTQGQ-----------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVK  299 (302)
Q Consensus       258 ~~~~~-----------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  299 (302)
                      |....                 +..+|+++|..+++|++ +...+++|+++.++|+...
T Consensus       219 ~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s-~~a~~itG~~i~vdGG~~~  276 (296)
T 3k31_A          219 ASSGISDFHYILTWNKYNSPLRRNTTLDDVGGAALYLLS-DLGRGTTGETVHVDCGYHV  276 (296)
T ss_dssp             SCCSCHHHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGGG
T ss_pred             hhhcccchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcC-CccCCccCCEEEECCCccc
Confidence            97653                 23689999999999997 6778899999999998654

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=100.00  E-value=6.9e-39  Score=292.34  Aligned_cols=230  Identities=20%  Similarity=0.219  Sum_probs=201.4

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEe-cChhhHHHHHHHHh-hCCCceeEEEeeCCCHH------------
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTA-RDVERGQRAVESLS-EKGLPVNFFQLDVSDPS------------   92 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~-r~~~~~~~~~~~l~-~~~~~~~~~~~Dlt~~~------------   92 (302)
                      ++++|+++||||++|||+++|++|+++|++|++++ |+.+++++..+++. ..+.++.++.+|+++.+            
T Consensus         6 ~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   85 (291)
T 1e7w_A            6 APTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAP   85 (291)
T ss_dssp             --CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCC
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCcccccccccccccc
Confidence            57899999999999999999999999999999999 99998888888886 55668999999999999            


Q ss_pred             -----HHHHHHHHHHhhCCCccEEEEcCCCCCC-CCCCCC--------------HHHHHHHHHhhhhHHHHHHHHHhhhh
Q 022103           93 -----SIEAFVSWFKSNFAALDILVNNAGVSFN-DIYKNT--------------VEHAETVIRTNFYGAKLLTESLLPLF  152 (302)
Q Consensus        93 -----~~~~~~~~~~~~~g~id~lv~~aG~~~~-~~~~~~--------------~e~~~~~~~vn~~~~~~l~~~~~~~l  152 (302)
                           +++++++++.+.++++|+||||||+... ++.+.+              .++|+.++++|+.++++++++++|.|
T Consensus        86 ~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m  165 (291)
T 1e7w_A           86 VTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRV  165 (291)
T ss_dssp             BCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred             cchHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence                 9999999999999999999999998644 567778              99999999999999999999999999


Q ss_pred             hcCCC-----CCcEEEecCCCcccccccCcccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHH
Q 022103          153 RRSPS-----KSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLA  227 (302)
Q Consensus       153 ~~~~~-----~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a  227 (302)
                      .+++.     .++||++||..+..+.+                                          ++..|++||++
T Consensus       166 ~~~~~~~~~~~g~Iv~isS~~~~~~~~------------------------------------------~~~~Y~asKaa  203 (291)
T 1e7w_A          166 AGTPAKHRGTNYSIINMVDAMTNQPLL------------------------------------------GYTIYTMAKGA  203 (291)
T ss_dssp             HTSCGGGSCSCEEEEEECCTTTTSCCT------------------------------------------TCHHHHHHHHH
T ss_pred             HhcCCCCCCCCcEEEEEechhhcCCCC------------------------------------------CCchhHHHHHH
Confidence            87621     58999999998875532                                          24789999999


Q ss_pred             HHHHHHHHHHHccCCCcEEEEeecCcccCCCCC-------------CC--CCCCHHHHHHHHHHHhhcCCCCCCCcceee
Q 022103          228 LNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ-------------GQ--GSHTADEAADVGARLLLLHPQQLPTAKFYI  292 (302)
Q Consensus       228 ~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~-------------~~--~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~  292 (302)
                      +++|+++|+.|++++||+||+|+||+|+|+| .             +.  +..+|+++|..+++|+. +...+++|+++.
T Consensus       204 ~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~-~~~~~~~~~~~~~~p~~~r~~~pedvA~~v~~l~s-~~~~~itG~~i~  281 (291)
T 1e7w_A          204 LEGLTRSAALELAPLQIRVNGVGPGLSVLVD-DMPPAVWEGHRSKVPLYQRDSSAAEVSDVVIFLCS-SKAKYITGTCVK  281 (291)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEESSBCCGG-GSCHHHHHHHHTTCTTTTSCBCHHHHHHHHHHHHS-GGGTTCCSCEEE
T ss_pred             HHHHHHHHHHHHHhcCeEEEEEeeCCccCCc-cCCHHHHHHHHhhCCCCCCCCCHHHHHHHHHHHhC-CcccCccCcEEE
Confidence            9999999999999999999999999999998 3             11  24589999999999997 677889999999


Q ss_pred             cCCcccCC
Q 022103          293 GLDPFVKS  300 (302)
Q Consensus       293 ~~~~~~~~  300 (302)
                      .+|+....
T Consensus       282 vdGG~~~~  289 (291)
T 1e7w_A          282 VDGGYSLT  289 (291)
T ss_dssp             ESTTGGGC
T ss_pred             ECCCcccc
Confidence            99986543

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=100.00  E-value=4.9e-39  Score=289.27  Aligned_cols=240  Identities=20%  Similarity=0.221  Sum_probs=203.1

Q ss_pred             CCCcccccccccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEE-EecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHH
Q 022103           16 SSSSLVSSTKWWSKETIAIVTGANKGIGFALVKRLAELGLTVIL-TARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSI   94 (302)
Q Consensus        16 ~~~~~~~~~~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l-~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~   94 (302)
                      +..........++.+|+++||||++|||+++|++|+++|++|++ ..|+.++.++..+++.+.+.++.++.+|++|++++
T Consensus        12 ~~~~~n~~~~~~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~   91 (267)
T 4iiu_A           12 DLGTENLYFQSNAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQC   91 (267)
T ss_dssp             -------------CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred             ccCChhhhhccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHH
Confidence            33444555566788999999999999999999999999999866 56778888888899888888999999999999999


Q ss_pred             HHHHHHHHhhCCCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCccccc
Q 022103           95 EAFVSWFKSNFAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSK  173 (302)
Q Consensus        95 ~~~~~~~~~~~g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~  173 (302)
                      +++++++.+.++++|+||||||.... ++.+.+.++|+..+++|+.+++++++.+++.|.++...++||++||..+..+.
T Consensus        92 ~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~  171 (267)
T 4iiu_A           92 REVLEHEIAQHGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMGN  171 (267)
T ss_dssp             HHHHHHHHHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHCC
T ss_pred             HHHHHHHHHHhCCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccCC
Confidence            99999999999999999999998754 56788999999999999999999999999988744367999999998887553


Q ss_pred             ccCcccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCc
Q 022103          174 VRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGF  253 (302)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~  253 (302)
                      +                                          ++..|++||+|++.|+++++.|++++||+|++|+||+
T Consensus       172 ~------------------------------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~  209 (267)
T 4iiu_A          172 R------------------------------------------GQVNYSAAKAGIIGATKALAIELAKRKITVNCIAPGL  209 (267)
T ss_dssp             T------------------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECS
T ss_pred             C------------------------------------------CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEee
Confidence            2                                          2478999999999999999999999999999999999


Q ss_pred             ccCCCCCCC--------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          254 TQTSMTQGQ--------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       254 v~T~~~~~~--------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                      |+|+|....              ...+|+++|..+++|+. +...+++|+++..+|+.+
T Consensus       210 v~t~~~~~~~~~~~~~~~~~p~~~~~~~edva~~~~~L~s-~~~~~itG~~i~vdGG~~  267 (267)
T 4iiu_A          210 IDTGMIEMEESALKEAMSMIPMKRMGQAEEVAGLASYLMS-DIAGYVTRQVISINGGML  267 (267)
T ss_dssp             BCSTTCCCCHHHHHHHHHTCTTCSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTCC
T ss_pred             ecCCcccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC-CcccCccCCEEEeCCCcC
Confidence            999997643              23689999999999997 677889999999998753

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=100.00  E-value=8.7e-39  Score=284.84  Aligned_cols=222  Identities=27%  Similarity=0.383  Sum_probs=197.0

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++...+.++.++.+|++|+++++++++++.+.++
T Consensus         4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g   83 (247)
T 2jah_A            4 ALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALG   83 (247)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            47899999999999999999999999999999999999999988888877777899999999999999999999999999


Q ss_pred             CccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccch
Q 022103          107 ALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILED  185 (302)
Q Consensus       107 ~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~  185 (302)
                      ++|+||||||.... ++.+.+.++|++++++|+.++++++++++|.|.++ + ++||++||..+..+.+           
T Consensus        84 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~-g~iv~isS~~~~~~~~-----------  150 (247)
T 2jah_A           84 GLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRS-K-GTVVQMSSIAGRVNVR-----------  150 (247)
T ss_dssp             CCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-T-CEEEEECCGGGTCCCT-----------
T ss_pred             CCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC-C-CEEEEEccHHhcCCCC-----------
Confidence            99999999998644 57889999999999999999999999999999876 3 9999999988875432           


Q ss_pred             hhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCCC--
Q 022103          186 EELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQG--  263 (302)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~~--  263 (302)
                                                     ++..|++||+++++|+++++.|++++||+||+|+||+++|+|.....  
T Consensus       151 -------------------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~  199 (247)
T 2jah_A          151 -------------------------------NAAVYQATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTELRGHITHT  199 (247)
T ss_dssp             -------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCCCH
T ss_pred             -------------------------------CCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCCCCCcchhcccch
Confidence                                           24789999999999999999999999999999999999999864321  


Q ss_pred             ------------C--CCHHHHHHHHHHHhhcCCCCCCCcceeec
Q 022103          264 ------------S--HTADEAADVGARLLLLHPQQLPTAKFYIG  293 (302)
Q Consensus       264 ------------~--~~~~~~a~~~~~l~~~~~~~~~~G~~~~~  293 (302)
                                  .  .+|+++|..+++++. ++..+..+.+.+.
T Consensus       200 ~~~~~~~~~~~~~~~~~pedvA~~v~~l~s-~~~~~~~~~i~i~  242 (247)
T 2jah_A          200 ATKEMYEQRISQIRKLQAQDIAEAVRYAVT-APHHATVHEIFIR  242 (247)
T ss_dssp             HHHHHHHHHTTTSCCBCHHHHHHHHHHHHH-SCTTEEEEEEEEE
T ss_pred             hhHHHHHhcccccCCCCHHHHHHHHHHHhC-CCccCccceEEec
Confidence                        2  689999999999997 5566666666543

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=100.00  E-value=8.1e-39  Score=286.37  Aligned_cols=228  Identities=24%  Similarity=0.255  Sum_probs=195.2

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      +++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++   +.++.++.+|++|.++++++++++.+.+
T Consensus         5 m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (261)
T 3n74_A            5 MSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI---GDAALAVAADISKEADVDAAVEAALSKF   81 (261)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CTTEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHhc
Confidence            5688999999999999999999999999999999999999988888776   4578999999999999999999999999


Q ss_pred             CCccEEEEcCCCCC--CCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCC---CCCcEEEecCCCcccccccCcccc
Q 022103          106 AALDILVNNAGVSF--NDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSP---SKSRILNISSRLGTLSKVRNPNIK  180 (302)
Q Consensus       106 g~id~lv~~aG~~~--~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~---~~~~iv~vsS~~~~~~~~~~~~~~  180 (302)
                      +++|+||||||...  ..+.+.+.++|++++++|+.++++++++++|.|.++.   ..++||++||..+..+.+      
T Consensus        82 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~------  155 (261)
T 3n74_A           82 GKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPRP------  155 (261)
T ss_dssp             SCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSCCT------
T ss_pred             CCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCCCC------
Confidence            99999999999864  2567789999999999999999999999999998752   257899999998875532      


Q ss_pred             cccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCC
Q 022103          181 SILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ  260 (302)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~  260 (302)
                                                          .+..|++||+|++.|+++|+.|++++||+|++|+||+++|++..
T Consensus       156 ------------------------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~  199 (261)
T 3n74_A          156 ------------------------------------NLAWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLT  199 (261)
T ss_dssp             ------------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC--------
T ss_pred             ------------------------------------CccHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhh
Confidence                                                24779999999999999999999999999999999999999876


Q ss_pred             CC-------------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcccC
Q 022103          261 GQ-------------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVK  299 (302)
Q Consensus       261 ~~-------------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  299 (302)
                      ..                   +..+|+++|..+++|+. +...+++|+++..+|+...
T Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s-~~~~~itG~~i~vdgG~~~  256 (261)
T 3n74_A          200 TFMGEDSEEIRKKFRDSIPMGRLLKPDDLAEAAAFLCS-PQASMITGVALDVDGGRSI  256 (261)
T ss_dssp             -----------------CTTSSCCCHHHHHHHHHHHTS-GGGTTCCSCEEEESTTTTC
T ss_pred             hhcccCcHHHHHHHhhcCCcCCCcCHHHHHHHHHHHcC-CcccCcCCcEEEecCCccc
Confidence            43                   12689999999999997 6778899999999998654

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=100.00  E-value=7.9e-39  Score=286.67  Aligned_cols=230  Identities=26%  Similarity=0.291  Sum_probs=204.6

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      ..+++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.+.++.++.+|++|.++++++++++.+.+
T Consensus        10 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   89 (260)
T 2zat_A           10 KPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLH   89 (260)
T ss_dssp             CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            34789999999999999999999999999999999999998888888887777788999999999999999999999999


Q ss_pred             CCccEEEEcCCCCC--CCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCccccccc
Q 022103          106 AALDILVNNAGVSF--NDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSIL  183 (302)
Q Consensus       106 g~id~lv~~aG~~~--~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~  183 (302)
                      +++|+||||||...  .++.+.+.++|++++++|+.++++++++++|.|.++ +.++||++||..+..+.+         
T Consensus        90 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~~---------  159 (260)
T 2zat_A           90 GGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKR-GGGSVLIVSSVGAYHPFP---------  159 (260)
T ss_dssp             SCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEEECCGGGTSCCT---------
T ss_pred             CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCCEEEEEechhhcCCCC---------
Confidence            99999999999753  356788999999999999999999999999999876 578999999988765422         


Q ss_pred             chhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCC--
Q 022103          184 EDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG--  261 (302)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~--  261 (302)
                                                       ++..|++||++++.|+++++.|++++||+||+|+||+++|+|...  
T Consensus       160 ---------------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~  206 (260)
T 2zat_A          160 ---------------------------------NLGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLW  206 (260)
T ss_dssp             ---------------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHHHH
T ss_pred             ---------------------------------CchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCccchhcc
Confidence                                             247899999999999999999999999999999999999998542  


Q ss_pred             ---------------CCCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcccC
Q 022103          262 ---------------QGSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVK  299 (302)
Q Consensus       262 ---------------~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  299 (302)
                                     ....+|+++|..+++|+. ++..+++|+.+..+++...
T Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s-~~~~~~tG~~~~vdgG~~~  258 (260)
T 2zat_A          207 MDKARKEYMKESLRIRRLGNPEDCAGIVSFLCS-EDASYITGETVVVGGGTAS  258 (260)
T ss_dssp             SSHHHHHHHHHHHTCSSCBCGGGGHHHHHHHTS-GGGTTCCSCEEEESTTCCC
T ss_pred             cChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcC-cccCCccCCEEEECCCccc
Confidence                           123689999999999986 5667899999999988654

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=100.00  E-value=1e-38  Score=288.84  Aligned_cols=221  Identities=24%  Similarity=0.242  Sum_probs=186.6

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      .+++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.   .++.++.+|++|+++++++++++.+.+|
T Consensus        25 ~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  101 (272)
T 4dyv_A           25 KTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIG---DDALCVPTDVTDPDSVRALFTATVEKFG  101 (272)
T ss_dssp             ---CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHT---SCCEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhC---CCeEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            4789999999999999999999999999999999999999888888774   5789999999999999999999999999


Q ss_pred             CccEEEEcCCCCC--CCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCC-CCCcEEEecCCCcccccccCccccccc
Q 022103          107 ALDILVNNAGVSF--NDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSP-SKSRILNISSRLGTLSKVRNPNIKSIL  183 (302)
Q Consensus       107 ~id~lv~~aG~~~--~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~-~~~~iv~vsS~~~~~~~~~~~~~~~~~  183 (302)
                      ++|+||||||...  .++.+.+.++|++++++|+.++++++++++|.|.+++ ..++||++||..+..+.+         
T Consensus       102 ~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~---------  172 (272)
T 4dyv_A          102 RVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPRP---------  172 (272)
T ss_dssp             CCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSCCT---------
T ss_pred             CCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCCCC---------
Confidence            9999999999864  3578899999999999999999999999999998863 268999999999876532         


Q ss_pred             chhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC-
Q 022103          184 EDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ-  262 (302)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~-  262 (302)
                                                       ++..|++||+|+++|+++|+.|++++||+||+|+||+|+|+|.+.. 
T Consensus       173 ---------------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~  219 (272)
T 4dyv_A          173 ---------------------------------YSAPYTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQKMK  219 (272)
T ss_dssp             ---------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC--------
T ss_pred             ---------------------------------CchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhhhhc
Confidence                                             2478999999999999999999999999999999999999997653 


Q ss_pred             -------------CCCCHHHHHHHHHHHhhcCCCCCCCcceee
Q 022103          263 -------------GSHTADEAADVGARLLLLHPQQLPTAKFYI  292 (302)
Q Consensus       263 -------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~  292 (302)
                                   +..+|+++|..+++|++.+.....++..+.
T Consensus       220 ~~~~~~~~~~~~~~~~~pedvA~~v~fL~s~~~~~~~~~i~i~  262 (272)
T 4dyv_A          220 AGVPQADLSIKVEPVMDVAHVASAVVYMASLPLDANVQFMTIM  262 (272)
T ss_dssp             ----------------CHHHHHHHHHHHHHSCTTSCCCEEEEE
T ss_pred             ccchhhhhcccccCCCCHHHHHHHHHHHhCCCCcCccceEEEe
Confidence                         136799999999999986555544444433

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=100.00  E-value=9.9e-39  Score=286.23  Aligned_cols=227  Identities=20%  Similarity=0.170  Sum_probs=200.3

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhC--CCceeEEEeeCCCHHHHHHHHHHHHh
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEK--GLPVNFFQLDVSDPSSIEAFVSWFKS  103 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dlt~~~~~~~~~~~~~~  103 (302)
                      +++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++...  +.++.++.+|++|+++++++++++.+
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   82 (260)
T 2z1n_A            3 LGIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARD   82 (260)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999998888888877643  33788999999999999999999999


Q ss_pred             hCCCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccc
Q 022103          104 NFAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSI  182 (302)
Q Consensus       104 ~~g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~  182 (302)
                      .++ +|+||||||.... ++.+.+.++|++++++|+.++++++++++|.|.++ +.++||++||..+..+.+        
T Consensus        83 ~~g-id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~~--------  152 (260)
T 2z1n_A           83 LGG-ADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEK-GWGRMVYIGSVTLLRPWQ--------  152 (260)
T ss_dssp             TTC-CSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTSCCT--------
T ss_pred             hcC-CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEECchhhcCCCC--------
Confidence            999 9999999997644 56788999999999999999999999999999876 569999999988865432        


Q ss_pred             cchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCC--
Q 022103          183 LEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ--  260 (302)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~--  260 (302)
                                                        ++..|++||++++.++++++.|++++||+||+|+||+++|+|..  
T Consensus       153 ----------------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  198 (260)
T 2z1n_A          153 ----------------------------------DLALSNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSL  198 (260)
T ss_dssp             ----------------------------------TBHHHHHHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC--
T ss_pred             ----------------------------------CCchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhhhh
Confidence                                              24789999999999999999999999999999999999999865  


Q ss_pred             --------CC----------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          261 --------GQ----------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       261 --------~~----------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                              ..                +..+|+++|..+++|+. +...+++|+++..+|+.
T Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~l~s-~~~~~~tG~~i~vdGG~  258 (260)
T 2z1n_A          199 AEERARRSGITVEEALKSMASRIPMGRVGKPEELASVVAFLAS-EKASFITGAVIPVDGGA  258 (260)
T ss_dssp             ---------------------CCTTSSCCCHHHHHHHHHHHTS-GGGTTCCSCEEEESTTT
T ss_pred             hhhhhcccCCcHHHHHHHHHhcCCCCCccCHHHHHHHHHHHhC-ccccCCCCCEEEeCCCc
Confidence                    11                11479999999999987 56778999999999875

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=100.00  E-value=2.9e-39  Score=290.21  Aligned_cols=226  Identities=25%  Similarity=0.234  Sum_probs=201.4

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.+.++.++.+|++|+++++++++++.+.++
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   83 (262)
T 1zem_A            4 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFG   83 (262)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            47899999999999999999999999999999999999999988888887777899999999999999999999999999


Q ss_pred             CccEEEEcCCCC-CC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccc
Q 022103          107 ALDILVNNAGVS-FN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILE  184 (302)
Q Consensus       107 ~id~lv~~aG~~-~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~  184 (302)
                      ++|+||||||.. .. ++.+.+.++|++++++|+.++++++++++|.|.++ +.++||++||..+..+.+          
T Consensus        84 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~~----------  152 (262)
T 1zem_A           84 KIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQ-NYGRIVNTASMAGVKGPP----------  152 (262)
T ss_dssp             CCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCHHHHSCCT----------
T ss_pred             CCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEEcchhhccCCC----------
Confidence            999999999986 33 57788999999999999999999999999999876 468999999988765432          


Q ss_pred             hhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCC---
Q 022103          185 DEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG---  261 (302)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~---  261 (302)
                                                      ++..|++||++++.|+++++.|++++||+||+|+||+++|+|...   
T Consensus       153 --------------------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~  200 (262)
T 1zem_A          153 --------------------------------NMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQV  200 (262)
T ss_dssp             --------------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHH
T ss_pred             --------------------------------CCchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcchhhhhcc
Confidence                                            247899999999999999999999999999999999999987421   


Q ss_pred             ----------C------------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCc
Q 022103          262 ----------Q------------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDP  296 (302)
Q Consensus       262 ----------~------------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  296 (302)
                                .                  +..+|+++|..+++|++ +...+++|+++..+|+
T Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s-~~~~~itG~~i~vdGG  262 (262)
T 1zem_A          201 ELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINEIPGVVAFLLG-DDSSFMTGVNLPIAGG  262 (262)
T ss_dssp             HHHHHHTCTTSCSSHHHHHHHHHHTSTTSSCBCGGGSHHHHHHHHS-GGGTTCCSCEEEESCC
T ss_pred             chhhhccccccccCHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcC-chhcCcCCcEEecCCC
Confidence                      0                  12479999999999987 5677899999998874

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=2.1e-38  Score=282.01  Aligned_cols=223  Identities=26%  Similarity=0.293  Sum_probs=196.8

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++   +  +.++.+|++|+++++++++++.++++
T Consensus         2 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~--~~~~~~D~~~~~~~~~~~~~~~~~~g   76 (245)
T 1uls_A            2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV---G--AHPVVMDVADPASVERGFAEALAHLG   76 (245)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT---T--CEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---C--CEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            467899999999999999999999999999999999988877665544   2  78899999999999999999999999


Q ss_pred             CccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccch
Q 022103          107 ALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILED  185 (302)
Q Consensus       107 ~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~  185 (302)
                      ++|+||||||.... ++.+.+.++|++++++|+.++++++++++|.|.++ +.++||++||.. ..+.+           
T Consensus        77 ~id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-~~g~iv~isS~~-~~~~~-----------  143 (245)
T 1uls_A           77 RLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREK-NPGSIVLTASRV-YLGNL-----------  143 (245)
T ss_dssp             SCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-CCEEEEEECCGG-GGCCT-----------
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCEEEEEccch-hcCCC-----------
Confidence            99999999998654 56788999999999999999999999999999876 579999999987 54422           


Q ss_pred             hhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC---
Q 022103          186 EELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ---  262 (302)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~---  262 (302)
                                                     ++..|++||++++.|+++++.|++++||+||+|+||+++|+|....   
T Consensus       144 -------------------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~  192 (245)
T 1uls_A          144 -------------------------------GQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVPEK  192 (245)
T ss_dssp             -------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSCHH
T ss_pred             -------------------------------CchhHHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchhhcCHH
Confidence                                           2367999999999999999999999999999999999999996542   


Q ss_pred             ------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcccC
Q 022103          263 ------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVK  299 (302)
Q Consensus       263 ------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  299 (302)
                                  ...+|+++|..+++++. ++..+++|+++..+|+...
T Consensus       193 ~~~~~~~~~p~~~~~~~~dvA~~v~~l~s-~~~~~~tG~~~~vdgG~~~  240 (245)
T 1uls_A          193 VREKAIAATPLGRAGKPLEVAYAALFLLS-DESSFITGQVLFVDGGRTI  240 (245)
T ss_dssp             HHHHHHHTCTTCSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTTTT
T ss_pred             HHHHHHhhCCCCCCcCHHHHHHHHHHHhC-chhcCCcCCEEEECCCccc
Confidence                        13589999999999987 5677899999999998643

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=100.00  E-value=7.6e-39  Score=286.35  Aligned_cols=226  Identities=26%  Similarity=0.345  Sum_probs=201.0

Q ss_pred             CcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCcc
Q 022103           30 ETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALD  109 (302)
Q Consensus        30 ~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id  109 (302)
                      +|+++||||++|||+++|++|+++|++|++++|+.+++++..+++...+.++.++.+|++|.++++++++++.+.++++|
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   81 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFD   81 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence            58999999999999999999999999999999999998888888877777889999999999999999999999999999


Q ss_pred             EEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhh
Q 022103          110 ILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEEL  188 (302)
Q Consensus       110 ~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  188 (302)
                      +||||||.... ++.+.+.++|++++++|+.++++++++++|.|.+++..++||++||..+..+.+              
T Consensus        82 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------------  147 (256)
T 1geg_A           82 VIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNP--------------  147 (256)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCT--------------
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCC--------------
Confidence            99999997654 577889999999999999999999999999998762268999999988765432              


Q ss_pred             cHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCC-------
Q 022103          189 SEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG-------  261 (302)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~-------  261 (302)
                                                  +...|++||++++.|+++++.|++++||+||+|+||+++|+|...       
T Consensus       148 ----------------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~  199 (256)
T 1geg_A          148 ----------------------------ELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSE  199 (256)
T ss_dssp             ----------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHH
T ss_pred             ----------------------------CchhHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCCccchhhhhhhhccc
Confidence                                        236799999999999999999999999999999999999987321       


Q ss_pred             -------------------CCCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          262 -------------------QGSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       262 -------------------~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                                         .+..+|+++|..+++|+. ++..+++|+++..+|+..
T Consensus       200 ~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s-~~~~~~tG~~i~vdGG~~  254 (256)
T 1geg_A          200 AAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLAS-PDSDYMTGQSLLIDGGMV  254 (256)
T ss_dssp             HHTCCTTHHHHHHHTTCTTCSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESSSSS
T ss_pred             cccCChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC-ccccCCCCCEEEeCCCcc
Confidence                               023589999999999987 567789999999999854

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=100.00  E-value=7.8e-39  Score=286.58  Aligned_cols=226  Identities=21%  Similarity=0.315  Sum_probs=200.3

Q ss_pred             CcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhh--HHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           30 ETIAIVTGANKGIGFALVKRLAELGLTVILTARDVER--GQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        30 ~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~--~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      +|+++||||++|||+++|++|+++|++|++++|+.++  +++..+++.+.+.++.++.+|++|+++++++++++.+++++
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   81 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLGG   81 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            6899999999999999999999999999999999887  78888888776778999999999999999999999999999


Q ss_pred             ccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchh
Q 022103          108 LDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDE  186 (302)
Q Consensus       108 id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~  186 (302)
                      +|+||||||.... ++.+.+.++|++++++|+.++++++++++|.|.+++..++||++||..+..+.+            
T Consensus        82 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------------  149 (258)
T 3a28_C           82 FDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQGFP------------  149 (258)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSCCT------------
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccCCC------------
Confidence            9999999998654 577889999999999999999999999999998762238999999988765432            


Q ss_pred             hhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCC-----
Q 022103          187 ELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG-----  261 (302)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~-----  261 (302)
                                                    ++..|++||++++.|+++++.|++++||+||+|+||+++|+|...     
T Consensus       150 ------------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~  199 (258)
T 3a28_C          150 ------------------------------ILSAYSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQIDAEL  199 (258)
T ss_dssp             ------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSHHHHHHHHHH
T ss_pred             ------------------------------CchhHHHHHHHHHHHHHHHHHHHHhhCeEEEEEECCccCChhhhhhhhhh
Confidence                                          247899999999999999999999999999999999999987321     


Q ss_pred             --------------------C-CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          262 --------------------Q-GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       262 --------------------~-~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                                          . +..+|+++|..+++|+. +...+++|+++..+|+..
T Consensus       200 ~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s-~~~~~~tG~~i~vdGG~~  256 (258)
T 3a28_C          200 SKINGKPIGENFKEYSSSIALGRPSVPEDVAGLVSFLAS-ENSNYVTGQVMLVDGGML  256 (258)
T ss_dssp             HHHHCCCTTHHHHHHHTTCTTSSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESSSSC
T ss_pred             ccccCCchHHHHHHHHhcCCCCCccCHHHHHHHHHHHhC-cccCCCCCCEEEECCCEe
Confidence                                0 13579999999999987 567789999999999854

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=100.00  E-value=8.8e-39  Score=283.65  Aligned_cols=225  Identities=25%  Similarity=0.321  Sum_probs=199.1

Q ss_pred             cccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCC-CceeEEEeeC--CCHHHHHHHHHHH
Q 022103           25 KWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKG-LPVNFFQLDV--SDPSSIEAFVSWF  101 (302)
Q Consensus        25 ~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dl--t~~~~~~~~~~~~  101 (302)
                      ...+++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.+ .++.++.+|+  ++.++++++++++
T Consensus         9 ~~~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~   88 (247)
T 3i1j_A            9 PELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARV   88 (247)
T ss_dssp             TTTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHH
T ss_pred             CccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHH
Confidence            346889999999999999999999999999999999999999999999888765 4667777777  9999999999999


Q ss_pred             HhhCCCccEEEEcCCCCC--CCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCccc
Q 022103          102 KSNFAALDILVNNAGVSF--NDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNI  179 (302)
Q Consensus       102 ~~~~g~id~lv~~aG~~~--~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~  179 (302)
                      .+.++++|+||||||...  .++.+.+.++|++++++|+.++++++++++|.|.++ ..++||++||..+..+.+     
T Consensus        89 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~~~iv~isS~~~~~~~~-----  162 (247)
T 3i1j_A           89 EHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRS-EDASIAFTSSSVGRKGRA-----  162 (247)
T ss_dssp             HHHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTS-SSEEEEEECCGGGTSCCT-----
T ss_pred             HHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC-CCCeEEEEcchhhcCCCC-----
Confidence            999999999999999853  357889999999999999999999999999999877 578999999988875532     


Q ss_pred             ccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccC-CCcEEEEeecCcccCCC
Q 022103          180 KSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEG-EGISVNSYCPGFTQTSM  258 (302)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~-~gI~V~~v~PG~v~T~~  258 (302)
                                                           ++..|++||+|+++|+++|+.|+++ .||+||+|+||+++|+|
T Consensus       163 -------------------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~  205 (247)
T 3i1j_A          163 -------------------------------------NWGAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTGM  205 (247)
T ss_dssp             -------------------------------------TCHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHH
T ss_pred             -------------------------------------CcchhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCcc
Confidence                                                 2478999999999999999999976 89999999999999988


Q ss_pred             CCC-------CCCCCHHHHHHHHHHHhhcCCCCCCCcceeec
Q 022103          259 TQG-------QGSHTADEAADVGARLLLLHPQQLPTAKFYIG  293 (302)
Q Consensus       259 ~~~-------~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~  293 (302)
                      ...       .....|+++|..+++|+. +...+++|+++..
T Consensus       206 ~~~~~~~~~~~~~~~p~dva~~~~~l~s-~~~~~itG~~i~~  246 (247)
T 3i1j_A          206 RAQAYPDENPLNNPAPEDIMPVYLYLMG-PDSTGINGQALNA  246 (247)
T ss_dssp             HHHHSTTSCGGGSCCGGGGTHHHHHHHS-GGGTTCCSCEEEC
T ss_pred             chhcccccCccCCCCHHHHHHHHHHHhC-chhccccCeeecC
Confidence            542       223679999999999997 6778899998864

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=100.00  E-value=2.6e-38  Score=287.70  Aligned_cols=231  Identities=23%  Similarity=0.251  Sum_probs=197.0

Q ss_pred             cccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecCh-hhHHHHHHHHh-hCCCceeEEEeeCCC----HHHHHHHH
Q 022103           25 KWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDV-ERGQRAVESLS-EKGLPVNFFQLDVSD----PSSIEAFV   98 (302)
Q Consensus        25 ~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~-~~~~~~~~~l~-~~~~~~~~~~~Dlt~----~~~~~~~~   98 (302)
                      ..++++|++|||||++|||+++|++|+++|++|++++|+. +++++..+++. +.+.++.++.+|++|    .+++++++
T Consensus        18 ~~~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~   97 (288)
T 2x9g_A           18 GSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEII   97 (288)
T ss_dssp             ----CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHH
T ss_pred             CcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHH
Confidence            4558899999999999999999999999999999999998 88888888886 556788999999999    99999999


Q ss_pred             HHHHhhCCCccEEEEcCCCCCC-CC-----CC-----CCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCC-----CCcEE
Q 022103           99 SWFKSNFAALDILVNNAGVSFN-DI-----YK-----NTVEHAETVIRTNFYGAKLLTESLLPLFRRSPS-----KSRIL  162 (302)
Q Consensus        99 ~~~~~~~g~id~lv~~aG~~~~-~~-----~~-----~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~-----~~~iv  162 (302)
                      +++.+.++++|+||||||+... ++     .+     .+.++|++++++|+.++++++++++|.|.+++.     .++||
T Consensus        98 ~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv  177 (288)
T 2x9g_A           98 NSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIV  177 (288)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEEE
T ss_pred             HHHHHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEEE
Confidence            9999999999999999998644 44     56     788999999999999999999999999987621     68999


Q ss_pred             EecCCCcccccccCcccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCC
Q 022103          163 NISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGE  242 (302)
Q Consensus       163 ~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~  242 (302)
                      ++||..+..+.+                                          ++.+|++||+|++.|+++|+.|++++
T Consensus       178 ~isS~~~~~~~~------------------------------------------~~~~Y~asKaa~~~l~~~la~e~~~~  215 (288)
T 2x9g_A          178 NLCDAMVDQPCM------------------------------------------AFSLYNMGKHALVGLTQSAALELAPY  215 (288)
T ss_dssp             EECCTTTTSCCT------------------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred             EEecccccCCCC------------------------------------------CCchHHHHHHHHHHHHHHHHHHhhcc
Confidence            999998865432                                          24789999999999999999999999


Q ss_pred             CcEEEEeecCcccCCCCCC-------------C-CC-CCHHHHHHHHHHHhhcCCCCCCCcceeecCCcccC
Q 022103          243 GISVNSYCPGFTQTSMTQG-------------Q-GS-HTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVK  299 (302)
Q Consensus       243 gI~V~~v~PG~v~T~~~~~-------------~-~~-~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  299 (302)
                      ||+||+|+||+|+|+| ..             . .. .+|+++|..+++|+. +...+++|+++..+|+...
T Consensus       216 gI~vn~v~PG~v~t~~-~~~~~~~~~~~~~~p~~r~~~~pedvA~~v~~l~s-~~~~~itG~~i~vdGG~~~  285 (288)
T 2x9g_A          216 GIRVNGVAPGVSLLPV-AMGEEEKDKWRRKVPLGRREASAEQIADAVIFLVS-GSAQYITGSIIKVDGGLSL  285 (288)
T ss_dssp             TEEEEEEEESSCSCCT-TSCHHHHHHHHHTCTTTSSCCCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGGG
T ss_pred             CeEEEEEEeccccCcc-ccChHHHHHHHhhCCCCCCCCCHHHHHHHHHHHhC-ccccCccCCEEEECcchhh
Confidence            9999999999999998 21             1 12 589999999999997 6778899999999998654

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=100.00  E-value=2.8e-38  Score=283.83  Aligned_cols=228  Identities=18%  Similarity=0.176  Sum_probs=200.9

Q ss_pred             ccccCcEEEEeCCC--chHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCC-ceeEEEeeCCCHHHHHHHHHHHH
Q 022103           26 WWSKETIAIVTGAN--KGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGL-PVNFFQLDVSDPSSIEAFVSWFK  102 (302)
Q Consensus        26 ~~~~~k~vlItGas--~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dlt~~~~~~~~~~~~~  102 (302)
                      +++++|+++||||+  +|||+++|++|+++|++|++++|+.+..+...+.+.+.+. ++.++.+|++|.++++++++++.
T Consensus         3 ~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   82 (266)
T 3oig_A            3 FSLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIK   82 (266)
T ss_dssp             SCCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHH
T ss_pred             cccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHH
Confidence            56889999999999  6699999999999999999999997665655555555444 78999999999999999999999


Q ss_pred             hhCCCccEEEEcCCCCC-----CCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCc
Q 022103          103 SNFAALDILVNNAGVSF-----NDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNP  177 (302)
Q Consensus       103 ~~~g~id~lv~~aG~~~-----~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~  177 (302)
                      +.++++|+||||||...     .++.+.+.++|+.++++|+.++++++++++|.|++   .++||++||..+..+.+   
T Consensus        83 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~g~iv~isS~~~~~~~~---  156 (266)
T 3oig_A           83 EQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTE---GGSIVTLTYLGGELVMP---  156 (266)
T ss_dssp             HHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT---CEEEEEEECGGGTSCCT---
T ss_pred             HHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCC---CceEEEEecccccccCC---
Confidence            99999999999999874     35678899999999999999999999999999874   48999999998875532   


Q ss_pred             ccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCC
Q 022103          178 NIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTS  257 (302)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~  257 (302)
                                                             ++..|++||+|+++|+++|+.|++++||+|++|+||+|+|+
T Consensus       157 ---------------------------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~  197 (266)
T 3oig_A          157 ---------------------------------------NYNVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTL  197 (266)
T ss_dssp             ---------------------------------------TTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSG
T ss_pred             ---------------------------------------CcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccc
Confidence                                                   24789999999999999999999999999999999999999


Q ss_pred             CCCCCC-----------------CCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcccC
Q 022103          258 MTQGQG-----------------SHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVK  299 (302)
Q Consensus       258 ~~~~~~-----------------~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  299 (302)
                      |.....                 ..+|+++|..+++|+. +...+++|+++..+|+...
T Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~v~~l~s-~~~~~~tG~~i~vdGG~~~  255 (266)
T 3oig_A          198 SAKGISDFNSILKDIEERAPLRRTTTPEEVGDTAAFLFS-DMSRGITGENLHVDSGFHI  255 (266)
T ss_dssp             GGTTCTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGGG
T ss_pred             ccccccchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcC-CchhcCcCCEEEECCCeEE
Confidence            877542                 2689999999999997 5677899999999998654

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=100.00  E-value=2.1e-38  Score=284.96  Aligned_cols=223  Identities=18%  Similarity=0.179  Sum_probs=187.9

Q ss_pred             cccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhh
Q 022103           25 KWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSN  104 (302)
Q Consensus        25 ~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~  104 (302)
                      .+++++|++|||||++|||+++|++|+++|++|++++|+.+++.+..++.     .+.++.+|++|+++++++++++.+.
T Consensus        22 ~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~Dv~~~~~v~~~~~~~~~~   96 (260)
T 3gem_A           22 HMTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQA-----GAVALYGDFSCETGIMAFIDLLKTQ   96 (260)
T ss_dssp             -----CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHH-----TCEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhc-----CCeEEECCCCCHHHHHHHHHHHHHh
Confidence            46789999999999999999999999999999999999987765444433     3788999999999999999999999


Q ss_pred             CCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccc
Q 022103          105 FAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILE  184 (302)
Q Consensus       105 ~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~  184 (302)
                      ++++|+||||||.......+.+.++|++++++|+.++++++++++|.|.++ +.++||++||..+..+.+          
T Consensus        97 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~-~~g~iv~isS~~~~~~~~----------  165 (260)
T 3gem_A           97 TSSLRAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTAS-EVADIVHISDDVTRKGSS----------  165 (260)
T ss_dssp             CSCCSEEEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTS-SSCEEEEECCGGGGTCCS----------
T ss_pred             cCCCCEEEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcEEEEECChhhcCCCC----------
Confidence            999999999999876544677889999999999999999999999999887 579999999988875532          


Q ss_pred             hhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC--
Q 022103          185 DEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ--  262 (302)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~--  262 (302)
                                                      ++..|++||+|+++|+++|+.|+++ +|+||+|+||+++|++....  
T Consensus       166 --------------------------------~~~~Y~asKaa~~~l~~~la~e~~~-~Irvn~v~PG~v~t~~~~~~~~  212 (260)
T 3gem_A          166 --------------------------------KHIAYCATKAGLESLTLSFAARFAP-LVKVNGIAPALLMFQPKDDAAY  212 (260)
T ss_dssp             --------------------------------SCHHHHHHHHHHHHHHHHHHHHHTT-TCEEEEEEECTTCC--------
T ss_pred             --------------------------------CcHhHHHHHHHHHHHHHHHHHHHCC-CCEEEEEeecccccCCCCCHHH
Confidence                                            2478999999999999999999988 69999999999999874321  


Q ss_pred             -----------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcccC
Q 022103          263 -----------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVK  299 (302)
Q Consensus       263 -----------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  299 (302)
                                 ...+|+++|..+++|+.   ..+++|+.+..+|+...
T Consensus       213 ~~~~~~~~p~~r~~~~edva~~v~~L~~---~~~itG~~i~vdGG~~~  257 (260)
T 3gem_A          213 RANALAKSALGIEPGAEVIYQSLRYLLD---STYVTGTTLTVNGGRHV  257 (260)
T ss_dssp             -------CCSCCCCCTHHHHHHHHHHHH---CSSCCSCEEEESTTTTT
T ss_pred             HHHHHhcCCCCCCCCHHHHHHHHHHHhh---CCCCCCCEEEECCCccc
Confidence                       12579999999999983   46799999999998654

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=1.1e-38  Score=292.13  Aligned_cols=229  Identities=23%  Similarity=0.281  Sum_probs=202.3

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCC---ceeEEEeeCCCHHHHHHHHHHHH
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGL---PVNFFQLDVSDPSSIEAFVSWFK  102 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~---~~~~~~~Dlt~~~~~~~~~~~~~  102 (302)
                      +++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.+.   ++.++.+|++|+++++++++++.
T Consensus        22 ~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~  101 (297)
T 1xhl_A           22 ARFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTL  101 (297)
T ss_dssp             -CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHH
Confidence            358899999999999999999999999999999999999999988888877665   78999999999999999999999


Q ss_pred             hhCCCccEEEEcCCCCCC-C--CCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCccc
Q 022103          103 SNFAALDILVNNAGVSFN-D--IYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNI  179 (302)
Q Consensus       103 ~~~g~id~lv~~aG~~~~-~--~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~  179 (302)
                      +.++++|+||||||.... +  +.+.+.++|++++++|+.++++++++++|.|.++ + ++||++||..+..+.      
T Consensus       102 ~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~-g~IV~isS~~~~~~~------  173 (297)
T 1xhl_A          102 AKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKT-K-GEIVNVSSIVAGPQA------  173 (297)
T ss_dssp             HHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-T-CEEEEECCGGGSSSC------
T ss_pred             HhcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhc-C-CEEEEEcCchhccCC------
Confidence            999999999999997643 4  6788999999999999999999999999999876 3 999999998876442      


Q ss_pred             ccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCC
Q 022103          180 KSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMT  259 (302)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~  259 (302)
                                                         ++++..|++||++++.++++++.|++++||+||+|+||+|+|+|.
T Consensus       174 -----------------------------------~~~~~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~  218 (297)
T 1xhl_A          174 -----------------------------------HSGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFM  218 (297)
T ss_dssp             -----------------------------------CTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHH
T ss_pred             -----------------------------------CCCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCccc
Confidence                                               122478999999999999999999999999999999999999874


Q ss_pred             CCC------------------------CCCCHHHHHHHHHHHhhcCC-CCCCCcceeecCCccc
Q 022103          260 QGQ------------------------GSHTADEAADVGARLLLLHP-QQLPTAKFYIGLDPFV  298 (302)
Q Consensus       260 ~~~------------------------~~~~~~~~a~~~~~l~~~~~-~~~~~G~~~~~~~~~~  298 (302)
                      ...                        ...+|+++|..+++|+. ++ ..+++|+++..+|+..
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~l~s-~~~~~~itG~~i~vdGG~~  281 (297)
T 1xhl_A          219 GAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIANIIVFLAD-RNLSSYIIGQSIVADGGST  281 (297)
T ss_dssp             HHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHHHHHHC-HHHHTTCCSCEEEESTTGG
T ss_pred             cccccccccccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC-CcccCCccCcEEEECCCcc
Confidence            321                        23679999999999987 44 6789999999999854

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=100.00  E-value=3.2e-38  Score=285.87  Aligned_cols=227  Identities=30%  Similarity=0.363  Sum_probs=202.8

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      ++++|+++||||++|||+++|+.|+++|++|++++|+.+++++..+++.+.+.++.++.+|++|.++++++++++.+.++
T Consensus        19 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   98 (277)
T 2rhc_B           19 TQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYG   98 (277)
T ss_dssp             CTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            57899999999999999999999999999999999999998888888877777899999999999999999999999999


Q ss_pred             CccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhh--hhcCCCCCcEEEecCCCcccccccCccccccc
Q 022103          107 ALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPL--FRRSPSKSRILNISSRLGTLSKVRNPNIKSIL  183 (302)
Q Consensus       107 ~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~--l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~  183 (302)
                      ++|+||||||.... ++.+.+.++|++++++|+.++++++++++|.  |.++ +.++||++||..+..+.+         
T Consensus        99 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~-~~g~iv~isS~~~~~~~~---------  168 (277)
T 2rhc_B           99 PVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLER-GTGRIVNIASTGGKQGVV---------  168 (277)
T ss_dssp             SCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHH-TEEEEEEECCGGGTSCCT---------
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhc-CCeEEEEECccccccCCC---------
Confidence            99999999998654 5678899999999999999999999999999  8775 468999999988765432         


Q ss_pred             chhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCC--
Q 022103          184 EDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG--  261 (302)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~--  261 (302)
                                                       ++..|++||++++.++++++.|++++||+||+|+||+++|+|...  
T Consensus       169 ---------------------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~  215 (277)
T 2rhc_B          169 ---------------------------------HAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVR  215 (277)
T ss_dssp             ---------------------------------TCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHHHHH
T ss_pred             ---------------------------------CCccHHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhhhhh
Confidence                                             236799999999999999999999999999999999999987321  


Q ss_pred             -----------------------C-CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          262 -----------------------Q-GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       262 -----------------------~-~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                                             . ...+|+++|..+++|+. ++..+++|+++..+|+.
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dvA~~v~~l~s-~~~~~~tG~~~~vdGG~  274 (277)
T 2rhc_B          216 EHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIG-PGAAAVTAQALNVCGGL  274 (277)
T ss_dssp             HHHHHHHTCCHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTC
T ss_pred             hhcccccccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC-chhcCCCCcEEEECCCc
Confidence                                   1 23689999999999987 56678999999999874

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=100.00  E-value=3.6e-38  Score=292.62  Aligned_cols=229  Identities=21%  Similarity=0.222  Sum_probs=201.0

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEe-cChhhHHHHHHHHh-hCCCceeEEEeeCCCHH-------------
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTA-RDVERGQRAVESLS-EKGLPVNFFQLDVSDPS-------------   92 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~-r~~~~~~~~~~~l~-~~~~~~~~~~~Dlt~~~-------------   92 (302)
                      +++|++|||||++|||+++|++|+++|++|++++ |+.+++++..+++. ..+.++.++.+|++|.+             
T Consensus        44 l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~  123 (328)
T 2qhx_A           44 PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPV  123 (328)
T ss_dssp             -CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------CCB
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhcccccccccccc
Confidence            7899999999999999999999999999999999 99999888888886 45668999999999999             


Q ss_pred             ----HHHHHHHHHHhhCCCccEEEEcCCCCCC-CCCCCC--------------HHHHHHHHHhhhhHHHHHHHHHhhhhh
Q 022103           93 ----SIEAFVSWFKSNFAALDILVNNAGVSFN-DIYKNT--------------VEHAETVIRTNFYGAKLLTESLLPLFR  153 (302)
Q Consensus        93 ----~~~~~~~~~~~~~g~id~lv~~aG~~~~-~~~~~~--------------~e~~~~~~~vn~~~~~~l~~~~~~~l~  153 (302)
                          +++++++++.+.++++|+||||||+... ++.+.+              .++|+.++++|+.++++++++++|.|.
T Consensus       124 ~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~  203 (328)
T 2qhx_A          124 TLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVA  203 (328)
T ss_dssp             CHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                9999999999999999999999998644 566777              899999999999999999999999998


Q ss_pred             cCCC-----CCcEEEecCCCcccccccCcccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHH
Q 022103          154 RSPS-----KSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLAL  228 (302)
Q Consensus       154 ~~~~-----~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~  228 (302)
                      +++.     .++||++||..+..+.+                                          ++..|++||+++
T Consensus       204 ~~~~~~~~~~g~IV~isS~~~~~~~~------------------------------------------~~~~Y~asKaal  241 (328)
T 2qhx_A          204 GTPAKHRGTNYSIINMVDAMTNQPLL------------------------------------------GYTIYTMAKGAL  241 (328)
T ss_dssp             HSCGGGSCSCEEEEEECCTTTTSCCT------------------------------------------TCHHHHHHHHHH
T ss_pred             hcCCcCCCCCcEEEEECchhhccCCC------------------------------------------CcHHHHHHHHHH
Confidence            7621     68999999998875432                                          247899999999


Q ss_pred             HHHHHHHHHHccCCCcEEEEeecCcccCCCCCC-------------C--CCCCHHHHHHHHHHHhhcCCCCCCCcceeec
Q 022103          229 NAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG-------------Q--GSHTADEAADVGARLLLLHPQQLPTAKFYIG  293 (302)
Q Consensus       229 ~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~-------------~--~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~  293 (302)
                      +.|+++|+.|++++||+||+|+||+|+|+| ..             .  ...+|+++|..+++|+. +...+++|+++..
T Consensus       242 ~~l~~~la~el~~~gIrvn~v~PG~v~T~~-~~~~~~~~~~~~~~p~~~r~~~pedvA~~v~~l~s-~~~~~itG~~i~v  319 (328)
T 2qhx_A          242 EGLTRSAALELAPLQIRVNGVGPGLSVLVD-DMPPAVWEGHRSKVPLYQRDSSAAEVSDVVIFLCS-SKAKYITGTCVKV  319 (328)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEESSBSCCC-CSCHHHHHHHHTTCTTTTSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEE
T ss_pred             HHHHHHHHHHHhhcCcEEEEEecCcccCCc-cccHHHHHHHHhhCCCCCCCCCHHHHHHHHHHHhC-ccccCccCcEEEE
Confidence            999999999999999999999999999998 32             1  34689999999999997 5778899999999


Q ss_pred             CCcccCC
Q 022103          294 LDPFVKS  300 (302)
Q Consensus       294 ~~~~~~~  300 (302)
                      +|+....
T Consensus       320 dGG~~~~  326 (328)
T 2qhx_A          320 DGGYSLT  326 (328)
T ss_dssp             STTGGGC
T ss_pred             CCCcccC
Confidence            9986543

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=100.00  E-value=3.4e-38  Score=286.43  Aligned_cols=225  Identities=18%  Similarity=0.126  Sum_probs=195.0

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++   +.++.++.+|++|.++++++++++.+.++
T Consensus         2 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   78 (281)
T 3zv4_A            2 KLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAH---GGNAVGVVGDVRSLQDQKRAAERCLAAFG   78 (281)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT---BTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CcCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHc---CCcEEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence            578999999999999999999999999999999999998887776654   45889999999999999999999999999


Q ss_pred             CccEEEEcCCCCCC--C----CCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccc
Q 022103          107 ALDILVNNAGVSFN--D----IYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIK  180 (302)
Q Consensus       107 ~id~lv~~aG~~~~--~----~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~  180 (302)
                      ++|+||||||+...  .    ..+.+.++|++++++|+.++++++++++|.|.++  .++||++||..+..+.+.     
T Consensus        79 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~-----  151 (281)
T 3zv4_A           79 KIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSS--RGSVVFTISNAGFYPNGG-----  151 (281)
T ss_dssp             CCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEECCGGGTSSSSS-----
T ss_pred             CCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhc--CCeEEEEecchhccCCCC-----
Confidence            99999999997532  2    2345567899999999999999999999999875  489999999988755332     


Q ss_pred             cccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCC
Q 022103          181 SILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ  260 (302)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~  260 (302)
                                                           +..|++||+|+++|+++|+.|+++. |+||+|+||+|+|+|..
T Consensus       152 -------------------------------------~~~Y~asKaa~~~l~~~la~e~~~~-Irvn~v~PG~v~T~~~~  193 (281)
T 3zv4_A          152 -------------------------------------GPLYTATKHAVVGLVRQMAFELAPH-VRVNGVAPGGMNTDLRG  193 (281)
T ss_dssp             -------------------------------------CHHHHHHHHHHHHHHHHHHHHHTTT-SEEEEEEECSSCC--CC
T ss_pred             -------------------------------------CchhHHHHHHHHHHHHHHHHHhcCC-CEEEEEECCcCcCCccc
Confidence                                                 4679999999999999999999887 99999999999999864


Q ss_pred             CC-------------------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcccC
Q 022103          261 GQ-------------------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVK  299 (302)
Q Consensus       261 ~~-------------------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  299 (302)
                      ..                         +..+|+|+|..+++|++.+...+++|+++..+|+...
T Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~~~~~~itG~~i~vdGG~~~  257 (281)
T 3zv4_A          194 PSSLGLSEQSISSVPLADMLKSVLPIGRMPALEEYTGAYVFFATRGDSLPATGALLNYDGGMGV  257 (281)
T ss_dssp             CTTCC--------CCHHHHHHHTCTTSSCCCGGGGSHHHHHHHSTTTSTTCSSCEEEESSSGGG
T ss_pred             ccccccccccccchhHHHHHHhcCCCCCCCCHHHHHHHHHHhhcccccccccCcEEEECCCCcc
Confidence            31                         2267899999999999756777899999999998653

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=3.9e-38  Score=281.71  Aligned_cols=220  Identities=25%  Similarity=0.318  Sum_probs=194.6

Q ss_pred             CcEEEEeCCCchHHHHHHHHHHHcC--CEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           30 ETIAIVTGANKGIGFALVKRLAELG--LTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        30 ~k~vlItGas~gIG~ala~~l~~~G--~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      +|+++||||++|||+++|++|+++|  ++|++++|+.+++++..+++   +.++.++.+|++|+++++++++++.+.+|+
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   78 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKY---GDRFFYVVGDITEDSVLKQLVNAAVKGHGK   78 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHH---GGGEEEEESCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHh---CCceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            6899999999999999999999985  78999999999888887776   347899999999999999999999999999


Q ss_pred             ccEEEEcCCCCC--CCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccch
Q 022103          108 LDILVNNAGVSF--NDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILED  185 (302)
Q Consensus       108 id~lv~~aG~~~--~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~  185 (302)
                      +|+||||||...  .++.+.+.++|++++++|+.++++++++++|.|+++  .++||++||..+..+.+           
T Consensus        79 id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~--~g~iv~isS~~~~~~~~-----------  145 (254)
T 3kzv_A           79 IDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKT--NGNVVFVSSDACNMYFS-----------  145 (254)
T ss_dssp             CCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEECCSCCCCSSC-----------
T ss_pred             ccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc--CCeEEEEcCchhccCCC-----------
Confidence            999999999853  367889999999999999999999999999999886  39999999998876532           


Q ss_pred             hhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCCC--
Q 022103          186 EELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQG--  263 (302)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~~--  263 (302)
                                                     ++..|++||+|+++|+++|+.|+  .||+||+|+||+|+|+|.....  
T Consensus       146 -------------------------------~~~~Y~asK~a~~~~~~~la~e~--~~i~vn~v~PG~v~t~~~~~~~~~  192 (254)
T 3kzv_A          146 -------------------------------SWGAYGSSKAALNHFAMTLANEE--RQVKAIAVAPGIVDTDMQVNIREN  192 (254)
T ss_dssp             -------------------------------CSHHHHHHHHHHHHHHHHHHHHC--TTSEEEEEECSSCCCCCSCCCCCC
T ss_pred             -------------------------------CcchHHHHHHHHHHHHHHHHhhc--cCcEEEEEeCCcccchhHHHhhcc
Confidence                                           24789999999999999999997  6899999999999999976541  


Q ss_pred             ----------------------CCCHHHHHHHHHHHhhcCC-CCCCCcceeecCCcccC
Q 022103          264 ----------------------SHTADEAADVGARLLLLHP-QQLPTAKFYIGLDPFVK  299 (302)
Q Consensus       264 ----------------------~~~~~~~a~~~~~l~~~~~-~~~~~G~~~~~~~~~~~  299 (302)
                                            ..+|+++|..+++|++ +. ..+++|+++.++++...
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~~r~~~p~dva~~v~~L~s-~~~~~~itG~~i~vdg~~~~  250 (254)
T 3kzv_A          193 VGPSSMSAEQLKMFRGLKENNQLLDSSVPATVYAKLAL-HGIPDGVNGQYLSYNDPALA  250 (254)
T ss_dssp             CCTTTSCHHHHHHHHHHHTTC----CHHHHHHHHHHHH-HCCCGGGTTCEEETTCGGGG
T ss_pred             cCccccCHHHHHHHHHHHhcCCcCCcccHHHHHHHHHh-hcccCCCCccEEEecCcccc
Confidence                                  2578999999999998 45 48899999999998653

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=100.00  E-value=1.1e-38  Score=298.23  Aligned_cols=230  Identities=23%  Similarity=0.284  Sum_probs=201.4

Q ss_pred             ccccccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhh-------HHHHHHHHhhCCCceeEEEeeCCCHHHH
Q 022103           22 SSTKWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVER-------GQRAVESLSEKGLPVNFFQLDVSDPSSI   94 (302)
Q Consensus        22 ~~~~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~-------~~~~~~~l~~~~~~~~~~~~Dlt~~~~~   94 (302)
                      +....+++||++|||||++|||+++|++|+++|++|++++|+.++       +++..+++.+.+.++.++.+|++|++++
T Consensus        37 ~~~~~~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v  116 (346)
T 3kvo_A           37 LPNTGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQI  116 (346)
T ss_dssp             CCCCSTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHH
T ss_pred             CccCCCCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHH
Confidence            334567899999999999999999999999999999999999874       6677788888788999999999999999


Q ss_pred             HHHHHHHHhhCCCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCccccc
Q 022103           95 EAFVSWFKSNFAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSK  173 (302)
Q Consensus        95 ~~~~~~~~~~~g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~  173 (302)
                      +++++++.+++|++|+||||||+... ++.+.+.++|++++++|+.++++++++++|+|+++ +.++||++||..+..+.
T Consensus       117 ~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~~g~IV~iSS~~~~~~~  195 (346)
T 3kvo_A          117 SAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKS-KVAHILNISPPLNLNPV  195 (346)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTC-SSCEEEEECCCCCCCGG
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC-CCCEEEEECCHHHcCCC
Confidence            99999999999999999999998754 67889999999999999999999999999999887 67999999999887542


Q ss_pred             ccCcccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCc
Q 022103          174 VRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGF  253 (302)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~  253 (302)
                      .                                        .+++.+|++||++++.|+++|+.|++ .||+||+|+||+
T Consensus       196 ~----------------------------------------~~~~~~Y~aSKaal~~l~~~la~e~~-~gIrvn~v~PG~  234 (346)
T 3kvo_A          196 W----------------------------------------FKQHCAYTIAKYGMSMYVLGMAEEFK-GEIAVNALWPKT  234 (346)
T ss_dssp             G----------------------------------------TSSSHHHHHHHHHHHHHHHHHHHHTT-TTCEEEEEECSB
T ss_pred             C----------------------------------------CCCchHHHHHHHHHHHHHHHHHHHhc-CCcEEEEEeCCC
Confidence            1                                        12247899999999999999999999 899999999995


Q ss_pred             -ccCCCCCCC-------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCc
Q 022103          254 -TQTSMTQGQ-------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDP  296 (302)
Q Consensus       254 -v~T~~~~~~-------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  296 (302)
                       ++|++...+       ...+|+++|+.+++|+. + ..+++|+++ .++.
T Consensus       235 ~i~T~~~~~~~~~~~~~r~~~pedvA~~v~~L~s-~-~~~itG~~i-vdgg  282 (346)
T 3kvo_A          235 AIHTAAMDMLGGPGIESQCRKVDIIADAAYSIFQ-K-PKSFTGNFV-IDEN  282 (346)
T ss_dssp             CBCCHHHHHHCC--CGGGCBCTHHHHHHHHHHHT-S-CTTCCSCEE-EHHH
T ss_pred             ccccHHHHhhccccccccCCCHHHHHHHHHHHHh-c-CCCCCceEE-ECCc
Confidence             899775432       23689999999999997 4 777999998 5554

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=100.00  E-value=8.2e-39  Score=288.52  Aligned_cols=221  Identities=22%  Similarity=0.265  Sum_probs=190.2

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      .++.+|++|||||++|||+++|++|+++|++|++++|+.++++...      ..++.++.+|++|.++++++++++.+.+
T Consensus        12 ~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~------~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   85 (266)
T 3p19_A           12 RGSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALN------LPNTLCAQVDVTDKYTFDTAITRAEKIY   85 (266)
T ss_dssp             ---CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTTC------CTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHhh------cCCceEEEecCCCHHHHHHHHHHHHHHC
Confidence            5678999999999999999999999999999999999987654321      2367899999999999999999999999


Q ss_pred             CCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccc
Q 022103          106 AALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILE  184 (302)
Q Consensus       106 g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~  184 (302)
                      |++|+||||||.... ++.+.+.++|++++++|+.|+++++++++|.|+++ +.++||++||..+..+.+          
T Consensus        86 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-~~g~IV~isS~~~~~~~~----------  154 (266)
T 3p19_A           86 GPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKAR-NCGTIINISSIAGKKTFP----------  154 (266)
T ss_dssp             CSEEEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEEEECCGGGTSCCT----------
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEEcChhhCCCCC----------
Confidence            999999999998754 67889999999999999999999999999999876 579999999998875532          


Q ss_pred             hhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCCC-
Q 022103          185 DEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQG-  263 (302)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~~-  263 (302)
                                                      ++..|++||+++++|+++|+.|++++||+||+|+||+|+|+|..... 
T Consensus       155 --------------------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~  202 (266)
T 3p19_A          155 --------------------------------DHAAYCGTKFAVHAISENVREEVAASNVRVMTIAPSAVKTELLSHTTS  202 (266)
T ss_dssp             --------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCSC
T ss_pred             --------------------------------CCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCccccchhhcccc
Confidence                                            24789999999999999999999999999999999999999976432 


Q ss_pred             ----------------CCCHHHHHHHHHHHhhcCCCCCCCcceeecCCc
Q 022103          264 ----------------SHTADEAADVGARLLLLHPQQLPTAKFYIGLDP  296 (302)
Q Consensus       264 ----------------~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  296 (302)
                                      ..+|+++|..+++++. .+.....+.+.+....
T Consensus       203 ~~~~~~~~~~~~~~~r~~~pedvA~av~~l~~-~~~~~~~~~i~i~p~~  250 (266)
T 3p19_A          203 QQIKDGYDAWRVDMGGVLAADDVARAVLFAYQ-QPQNVCIREIALAPTK  250 (266)
T ss_dssp             HHHHHHHHHHHHHTTCCBCHHHHHHHHHHHHH-SCTTEEEEEEEEEETT
T ss_pred             hhhhHHHHhhcccccCCCCHHHHHHHHHHHHc-CCCCccceeeEEecCC
Confidence                            3689999999999998 4555566666655443

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=1.9e-38  Score=287.49  Aligned_cols=228  Identities=23%  Similarity=0.285  Sum_probs=201.0

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCC---ceeEEEeeCCCHHHHHHHHHHHHh
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGL---PVNFFQLDVSDPSSIEAFVSWFKS  103 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~---~~~~~~~Dlt~~~~~~~~~~~~~~  103 (302)
                      .+++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.+.   ++.++.+|++|+++++++++++.+
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   82 (280)
T 1xkq_A            3 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLK   82 (280)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHH
Confidence            46889999999999999999999999999999999999999888888876665   789999999999999999999999


Q ss_pred             hCCCccEEEEcCCCCCC-C----CCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcc
Q 022103          104 NFAALDILVNNAGVSFN-D----IYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPN  178 (302)
Q Consensus       104 ~~g~id~lv~~aG~~~~-~----~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~  178 (302)
                      +++++|+||||||.... +    +.+.+.++|++++++|+.++++++++++|.|.++ + ++||++||..+..+.     
T Consensus        83 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~-g~iv~isS~~~~~~~-----  155 (280)
T 1xkq_A           83 QFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVAS-K-GEIVNVSSIVAGPQA-----  155 (280)
T ss_dssp             HHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-T-CEEEEECCGGGSSSC-----
T ss_pred             hcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcC-C-CcEEEecCccccCCC-----
Confidence            99999999999997643 3    6788999999999999999999999999999876 3 999999998876442     


Q ss_pred             cccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCC
Q 022103          179 IKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSM  258 (302)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~  258 (302)
                                                          ++++..|++||++++.|+++++.|++++||+||+|+||+|+|+|
T Consensus       156 ------------------------------------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~  199 (280)
T 1xkq_A          156 ------------------------------------QPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGF  199 (280)
T ss_dssp             ------------------------------------CCSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSH
T ss_pred             ------------------------------------CCcccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCc
Confidence                                                12247899999999999999999999999999999999999997


Q ss_pred             CCCC------------------------CCCCHHHHHHHHHHHhhcCC-CCCCCcceeecCCccc
Q 022103          259 TQGQ------------------------GSHTADEAADVGARLLLLHP-QQLPTAKFYIGLDPFV  298 (302)
Q Consensus       259 ~~~~------------------------~~~~~~~~a~~~~~l~~~~~-~~~~~G~~~~~~~~~~  298 (302)
                      ....                        ...+|+++|..+++|+. ++ ..+++|+++..+|+..
T Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pedvA~~v~~l~s-~~~~~~~tG~~i~vdgG~~  263 (280)
T 1xkq_A          200 TNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIANIILFLAD-RNLSFYILGQSIVADGGTS  263 (280)
T ss_dssp             HHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHHHHHHC-HHHHTTCCSCEEEESTTGG
T ss_pred             ccccccccccccchHHHHHHHHcCCCCCCCCCHHHHHHHHHHhcC-cccccCccCCeEEECCCcc
Confidence            4321                        23589999999999986 44 6679999999998853

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=100.00  E-value=2.7e-38  Score=282.81  Aligned_cols=225  Identities=25%  Similarity=0.330  Sum_probs=198.1

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++   +.++.++.+|++|+++++++++++.+.++
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   78 (254)
T 1hdc_A            2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL---GDAARYQHLDVTIEEDWQRVVAYAREEFG   78 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT---GGGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence            367899999999999999999999999999999999998887776665   34688999999999999999999999999


Q ss_pred             CccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccch
Q 022103          107 ALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILED  185 (302)
Q Consensus       107 ~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~  185 (302)
                      ++|+||||||.... ++.+.+.++|++++++|+.++++++++++|.|+++ +.++||++||..+..+.+           
T Consensus        79 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~~-----------  146 (254)
T 1hdc_A           79 SVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDA-GGGSIVNISSAAGLMGLA-----------  146 (254)
T ss_dssp             CCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTSCCT-----------
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCCEEEEECchhhccCCC-----------
Confidence            99999999998654 56788999999999999999999999999999876 469999999988865432           


Q ss_pred             hhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCC----
Q 022103          186 EELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG----  261 (302)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~----  261 (302)
                                                     ++..|++||++++.|+++++.|++++||+||+|+||+++|+|...    
T Consensus       147 -------------------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~  195 (254)
T 1hdc_A          147 -------------------------------LTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIR  195 (254)
T ss_dssp             -------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTCC
T ss_pred             -------------------------------CchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccCcCccccccchh
Confidence                                           247899999999999999999999999999999999999986321    


Q ss_pred             ----------C-CCC-CHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          262 ----------Q-GSH-TADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       262 ----------~-~~~-~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                                . ... +|+++|..+++++. ++..+++|+++..+|+..
T Consensus       196 ~~~~~~~~~p~~~~~~~~~dvA~~v~~l~s-~~~~~~tG~~~~vdgG~~  243 (254)
T 1hdc_A          196 QGEGNYPNTPMGRVGNEPGEIAGAVVKLLS-DTSSYVTGAELAVDGGWT  243 (254)
T ss_dssp             CSTTSCTTSTTSSCB-CHHHHHHHHHHHHS-GGGTTCCSCEEEESTTTT
T ss_pred             HHHHHHhcCCCCCCCCCHHHHHHHHHHHhC-chhcCCCCCEEEECCCcc
Confidence                      1 124 89999999999987 566789999999998854

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=100.00  E-value=4e-38  Score=284.09  Aligned_cols=227  Identities=29%  Similarity=0.373  Sum_probs=196.2

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEE-ecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILT-ARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~-~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      +++|++|||||++|||+++|++|+++|++|+++ .|+.+.++...+++.+.+.++.++.+|++|.++++++++++.+.++
T Consensus        24 ~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  103 (272)
T 4e3z_A           24 SDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFG  103 (272)
T ss_dssp             CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence            457999999999999999999999999999776 7888888888888888888899999999999999999999999999


Q ss_pred             CccEEEEcCCCCC--CCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcC--CCCCcEEEecCCCcccccccCcccccc
Q 022103          107 ALDILVNNAGVSF--NDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRS--PSKSRILNISSRLGTLSKVRNPNIKSI  182 (302)
Q Consensus       107 ~id~lv~~aG~~~--~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~--~~~~~iv~vsS~~~~~~~~~~~~~~~~  182 (302)
                      ++|+||||||...  .++.+.+.++|++++++|+.+++++++.++|.|.+.  +..++||++||..+..+.+        
T Consensus       104 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------  175 (272)
T 4e3z_A          104 RLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSA--------  175 (272)
T ss_dssp             CCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCT--------
T ss_pred             CCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCCC--------
Confidence            9999999999864  357888999999999999999999999999999772  2468999999988865432        


Q ss_pred             cchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC
Q 022103          183 LEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ  262 (302)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~  262 (302)
                                                       +.+..|++||+|++.|+++|+.|++++||+|++|+||+|+|++....
T Consensus       176 ---------------------------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~  222 (272)
T 4e3z_A          176 ---------------------------------TQYVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASG  222 (272)
T ss_dssp             ---------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------
T ss_pred             ---------------------------------CCcchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCccccc
Confidence                                             23467999999999999999999999999999999999999986541


Q ss_pred             ----------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCc
Q 022103          263 ----------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDP  296 (302)
Q Consensus       263 ----------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  296 (302)
                                      ...+|+++|..+++++. +...+++|++|..+|+
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~s-~~~~~~tG~~i~vdgG  271 (272)
T 4e3z_A          223 GLPDRAREMAPSVPMQRAGMPEEVADAILYLLS-PSASYVTGSILNVSGG  271 (272)
T ss_dssp             -----------CCTTSSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTT
T ss_pred             CChHHHHHHhhcCCcCCCcCHHHHHHHHHHHhC-CccccccCCEEeecCC
Confidence                            12459999999999987 5677899999999875

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=100.00  E-value=5e-38  Score=282.00  Aligned_cols=230  Identities=20%  Similarity=0.219  Sum_probs=194.0

Q ss_pred             cccccccCcEEEEeCCC--chHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHH
Q 022103           23 STKWWSKETIAIVTGAN--KGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSW  100 (302)
Q Consensus        23 ~~~~~~~~k~vlItGas--~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~  100 (302)
                      .....+++|++|||||+  +|||+++|++|+++|++|++++|+.+..+ ..+++.+..+++.++.+|++|++++++++++
T Consensus         7 ~~~~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   85 (271)
T 3ek2_A            7 HHMGFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKD-RITEFAAEFGSELVFPCDVADDAQIDALFAS   85 (271)
T ss_dssp             --CCTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHH-HHHHHHHHTTCCCEEECCTTCHHHHHHHHHH
T ss_pred             CCccccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHH-HHHHHHHHcCCcEEEECCCCCHHHHHHHHHH
Confidence            34567899999999998  99999999999999999999999964444 3444433344689999999999999999999


Q ss_pred             HHhhCCCccEEEEcCCCCC-----CCCCC-CCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccc
Q 022103          101 FKSNFAALDILVNNAGVSF-----NDIYK-NTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKV  174 (302)
Q Consensus       101 ~~~~~g~id~lv~~aG~~~-----~~~~~-~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~  174 (302)
                      +.++++++|+||||||...     .++.+ .+.++|+.++++|+.++++++++++|.|.+   .++||++||..+..+.+
T Consensus        86 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~g~iv~isS~~~~~~~~  162 (271)
T 3ek2_A           86 LKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSD---DASLLTLSYLGAERAIP  162 (271)
T ss_dssp             HHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEE---EEEEEEEECGGGTSBCT
T ss_pred             HHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhcc---CceEEEEeccccccCCC
Confidence            9999999999999999864     34455 899999999999999999999999999975   48999999988875532


Q ss_pred             cCcccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcc
Q 022103          175 RNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFT  254 (302)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v  254 (302)
                                                                ++.+|++||+|+++|+++++.|++++||+|++|+||+|
T Consensus       163 ------------------------------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v  200 (271)
T 3ek2_A          163 ------------------------------------------NYNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPI  200 (271)
T ss_dssp             ------------------------------------------TTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC
T ss_pred             ------------------------------------------CccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcc
Confidence                                                      24789999999999999999999999999999999999


Q ss_pred             cCCCCCCC-----------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcccC
Q 022103          255 QTSMTQGQ-----------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVK  299 (302)
Q Consensus       255 ~T~~~~~~-----------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  299 (302)
                      +|+|....                 +..+|+++|..+++|+. +...+++|+++..+|+...
T Consensus       201 ~T~~~~~~~~~~~~~~~~~~~~~~~~~~~pedva~~i~~l~s-~~~~~~tG~~i~vdgG~~~  261 (271)
T 3ek2_A          201 KTLAASGIKSFGKILDFVESNSPLKRNVTIEQVGNAGAFLLS-DLASGVTAEVMHVDSGFNA  261 (271)
T ss_dssp             -----CCCHHHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHS-GGGTTCCSEEEEESTTGGG
T ss_pred             cchhhhcccchHHHHHHHHhcCCcCCCCCHHHHHHHHHHHcC-cccCCeeeeEEEECCCeee
Confidence            99997653                 23689999999999997 5678899999999998654

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=100.00  E-value=2.3e-38  Score=284.32  Aligned_cols=232  Identities=22%  Similarity=0.307  Sum_probs=203.3

Q ss_pred             ccccccCcEEEEeCCC--chHHHHHHHHHHHcCCEEEEEecChhhH-HHHHHHHhh-CCCceeEEEeeCCCHHHHHHHHH
Q 022103           24 TKWWSKETIAIVTGAN--KGIGFALVKRLAELGLTVILTARDVERG-QRAVESLSE-KGLPVNFFQLDVSDPSSIEAFVS   99 (302)
Q Consensus        24 ~~~~~~~k~vlItGas--~gIG~ala~~l~~~G~~V~l~~r~~~~~-~~~~~~l~~-~~~~~~~~~~Dlt~~~~~~~~~~   99 (302)
                      ..+++++|+++||||+  +|||+++|++|+++|++|++++|+.++. ++..+++.+ .+.++.++.+|++|+++++++++
T Consensus        14 ~~~~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~   93 (267)
T 3gdg_A           14 DQLSLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVK   93 (267)
T ss_dssp             HHHCCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHH
T ss_pred             cccCcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHH
Confidence            3467899999999999  9999999999999999999999987655 666666653 36689999999999999999999


Q ss_pred             HHHhhCCCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcc
Q 022103          100 WFKSNFAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPN  178 (302)
Q Consensus       100 ~~~~~~g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~  178 (302)
                      ++.+.++++|+||||||.... ++.+.+.++|++++++|+.++++++++++|.|.++ +.++||++||..+..+..    
T Consensus        94 ~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~~~~----  168 (267)
T 3gdg_A           94 DVVADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKER-GTGSLVITASMSGHIANF----  168 (267)
T ss_dssp             HHHHHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEEEECCGGGTSCCS----
T ss_pred             HHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHc-CCceEEEEccccccccCC----
Confidence            999999999999999998755 57888999999999999999999999999999887 579999999988865432    


Q ss_pred             cccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCC
Q 022103          179 IKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSM  258 (302)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~  258 (302)
                                                          ++++..|++||+|++.|+++++.|+++. |+||+|+||+++|+|
T Consensus       169 ------------------------------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~-i~v~~v~PG~v~t~~  211 (267)
T 3gdg_A          169 ------------------------------------PQEQTSYNVAKAGCIHMARSLANEWRDF-ARVNSISPGYIDTGL  211 (267)
T ss_dssp             ------------------------------------SSCCHHHHHHHHHHHHHHHHHHHHTTTT-CEEEEEEECCEECSC
T ss_pred             ------------------------------------CCCCCcchHHHHHHHHHHHHHHHHhccC-cEEEEEECCccccch
Confidence                                                2235789999999999999999999877 999999999999999


Q ss_pred             CCCCC---------------CCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          259 TQGQG---------------SHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       259 ~~~~~---------------~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                      .+...               ..+|+++|..+++|+. +...+++|+.+..+|+..
T Consensus       212 ~~~~~~~~~~~~~~~~~~~r~~~~~dva~~~~~l~s-~~~~~itG~~i~vdgG~~  265 (267)
T 3gdg_A          212 SDFVPKETQQLWHSMIPMGRDGLAKELKGAYVYFAS-DASTYTTGADLLIDGGYT  265 (267)
T ss_dssp             GGGSCHHHHHHHHTTSTTSSCEETHHHHHHHHHHHS-TTCTTCCSCEEEESTTGG
T ss_pred             hhhCCHHHHHHHHhcCCCCCCcCHHHHHhHhheeec-CccccccCCEEEECCcee
Confidence            76431               2469999999999997 677889999999999865

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=100.00  E-value=8e-39  Score=295.92  Aligned_cols=229  Identities=24%  Similarity=0.256  Sum_probs=204.3

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecC----------hhhHHHHHHHHhhCCCceeEEEeeCCCHHHHH
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARD----------VERGQRAVESLSEKGLPVNFFQLDVSDPSSIE   95 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~----------~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~   95 (302)
                      ..+++|++|||||++|||+++|++|+++|++|++++|+          .+.+++..+++.+.+.++.++.+|++|+++++
T Consensus        23 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~  102 (322)
T 3qlj_A           23 GVVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAA  102 (322)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHH
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHH
Confidence            35889999999999999999999999999999999998          67888888888888888999999999999999


Q ss_pred             HHHHHHHhhCCCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCC-----CCCcEEEecCCCc
Q 022103           96 AFVSWFKSNFAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSP-----SKSRILNISSRLG  169 (302)
Q Consensus        96 ~~~~~~~~~~g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~-----~~~~iv~vsS~~~  169 (302)
                      ++++++.+++|++|+||||||.... ++.+.+.++|++++++|+.+++++++++++.|.+..     ..++||++||..+
T Consensus       103 ~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~~~  182 (322)
T 3qlj_A          103 GLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAG  182 (322)
T ss_dssp             HHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCHHH
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCHHH
Confidence            9999999999999999999998754 578899999999999999999999999999987531     1379999999888


Q ss_pred             ccccccCcccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEe
Q 022103          170 TLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSY  249 (302)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v  249 (302)
                      ..+.+.                                          +.+|++||+|++.|+++|+.|++++||+||+|
T Consensus       183 ~~~~~~------------------------------------------~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v  220 (322)
T 3qlj_A          183 LQGSVG------------------------------------------QGNYSAAKAGIATLTLVGAAEMGRYGVTVNAI  220 (322)
T ss_dssp             HHCBTT------------------------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEE
T ss_pred             ccCCCC------------------------------------------CccHHHHHHHHHHHHHHHHHHhcccCcEEEEe
Confidence            755332                                          37899999999999999999999999999999


Q ss_pred             ecCcccCCCCCCC------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          250 CPGFTQTSMTQGQ------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       250 ~PG~v~T~~~~~~------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                      +|| +.|+|....            ...+|+++|..+++|++ +...+++|+++..+|+..
T Consensus       221 ~PG-~~t~~~~~~~~~~~~~~~~~~~~~~pedva~~v~~L~s-~~~~~itG~~i~vdGG~~  279 (322)
T 3qlj_A          221 APS-ARTRMTETVFAEMMATQDQDFDAMAPENVSPLVVWLGS-AEARDVTGKVFEVEGGKI  279 (322)
T ss_dssp             EEC-TTSCCSCCSCCC--------CCTTCGGGTHHHHHHHTS-GGGGGCCSCEEEEETTEE
T ss_pred             cCC-CCCccchhhhhhhhhccccccCCCCHHHHHHHHHHHhC-ccccCCCCCEEEECCCcc
Confidence            999 999987653            22579999999999997 677889999999998753

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=100.00  E-value=7.6e-38  Score=280.93  Aligned_cols=225  Identities=24%  Similarity=0.340  Sum_probs=199.0

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++..   ++.++.+|++|+++++++++++.++++
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~D~~~~~~v~~~~~~~~~~~g   80 (260)
T 1nff_A            4 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELAD---AARYVHLDVTQPAQWKAAVDTAVTAFG   80 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGG---GEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhc---CceEEEecCCCHHHHHHHHHHHHHHcC
Confidence            47899999999999999999999999999999999999888877777643   578899999999999999999999999


Q ss_pred             CccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccch
Q 022103          107 ALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILED  185 (302)
Q Consensus       107 ~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~  185 (302)
                      ++|+||||||.... ++.+.+.++|++++++|+.++++++++++|.|+++ +.++||++||..+..+.+           
T Consensus        81 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~~-----------  148 (260)
T 1nff_A           81 GLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEA-GRGSIINISSIEGLAGTV-----------  148 (260)
T ss_dssp             CCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTSCCT-----------
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCEEEEEeehhhcCCCC-----------
Confidence            99999999998654 57788999999999999999999999999999876 468999999988865432           


Q ss_pred             hhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCC-----
Q 022103          186 EELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ-----  260 (302)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~-----  260 (302)
                                                     +...|++||++++.++++++.|++++||+|++|+||+++|++..     
T Consensus       149 -------------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~  197 (260)
T 1nff_A          149 -------------------------------ACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWVPED  197 (260)
T ss_dssp             -------------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTSCTT
T ss_pred             -------------------------------CchhHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCccccchhh
Confidence                                           23679999999999999999999999999999999999999854     


Q ss_pred             ----CC-CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          261 ----GQ-GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       261 ----~~-~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                          .. ...+|+++|..+++++. +...+++|+++..+|+..
T Consensus       198 ~~~~~~~~~~~~~dvA~~v~~l~s-~~~~~~~G~~~~v~gG~~  239 (260)
T 1nff_A          198 IFQTALGRAAEPVEVSNLVVYLAS-DESSYSTGAEFVVDGGTV  239 (260)
T ss_dssp             CSCCSSSSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGG
T ss_pred             HHhCccCCCCCHHHHHHHHHHHhC-ccccCCcCCEEEECCCee
Confidence                11 23579999999999987 566779999999998753

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=100.00  E-value=8.3e-38  Score=282.18  Aligned_cols=229  Identities=20%  Similarity=0.218  Sum_probs=194.4

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEec-ChhhHHHHHHHHhhC-CCceeEEEeeCCCH----HHHHHHHHH
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTAR-DVERGQRAVESLSEK-GLPVNFFQLDVSDP----SSIEAFVSW  100 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r-~~~~~~~~~~~l~~~-~~~~~~~~~Dlt~~----~~~~~~~~~  100 (302)
                      .+++|+++||||++|||+++|++|+++|++|++++| +.+++++..+++.+. +.++.++.+|++|.    +++++++++
T Consensus         8 ~~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   87 (276)
T 1mxh_A            8 ASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDC   87 (276)
T ss_dssp             ---CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHH
Confidence            367899999999999999999999999999999999 888888888888654 56789999999999    999999999


Q ss_pred             HHhhCCCccEEEEcCCCCCC-CCCCCCH-----------HHHHHHHHhhhhHHHHHHHHHhhhhhcCCCC------CcEE
Q 022103          101 FKSNFAALDILVNNAGVSFN-DIYKNTV-----------EHAETVIRTNFYGAKLLTESLLPLFRRSPSK------SRIL  162 (302)
Q Consensus       101 ~~~~~g~id~lv~~aG~~~~-~~~~~~~-----------e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~------~~iv  162 (302)
                      +.+.++++|+||||||.... ++.+.+.           ++|++++++|+.++++++++++|.|. + +.      ++||
T Consensus        88 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-~-~~~~~~~~g~iv  165 (276)
T 1mxh_A           88 SFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQG-E-GGAWRSRNLSVV  165 (276)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC---------CCCEEEE
T ss_pred             HHHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHh-c-CCCCCCCCcEEE
Confidence            99999999999999998654 5667777           99999999999999999999999997 4 34      8999


Q ss_pred             EecCCCcccccccCcccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCC
Q 022103          163 NISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGE  242 (302)
Q Consensus       163 ~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~  242 (302)
                      ++||..+..+.+                                          ++..|++||++++.|+++|+.|++++
T Consensus       166 ~isS~~~~~~~~------------------------------------------~~~~Y~asK~a~~~l~~~la~e~~~~  203 (276)
T 1mxh_A          166 NLCDAMTDLPLP------------------------------------------GFCVYTMAKHALGGLTRAAALELAPR  203 (276)
T ss_dssp             EECCGGGGSCCT------------------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred             EECchhhcCCCC------------------------------------------CCeehHHHHHHHHHHHHHHHHHHhhc
Confidence            999998875432                                          24789999999999999999999999


Q ss_pred             CcEEEEeecCcccCCCCC-------------CC-C-CCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcccCCC
Q 022103          243 GISVNSYCPGFTQTSMTQ-------------GQ-G-SHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVKSN  301 (302)
Q Consensus       243 gI~V~~v~PG~v~T~~~~-------------~~-~-~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~~  301 (302)
                      ||+||+|+||+++|+ ..             .. . ..+|+++|..+++|+. +...+++|+++..+|+....+
T Consensus       204 gi~v~~v~PG~v~t~-~~~~~~~~~~~~~~~p~~r~~~~~~dva~~v~~l~s-~~~~~~tG~~~~vdgG~~~~~  275 (276)
T 1mxh_A          204 HIRVNAVAPGLSLLP-PAMPQETQEEYRRKVPLGQSEASAAQIADAIAFLVS-KDAGYITGTTLKVDGGLILAR  275 (276)
T ss_dssp             TEEEEEEEESSBSCC-SSSCHHHHHHHHTTCTTTSCCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGGGCC
T ss_pred             CeEEEEEecCcccCC-ccCCHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhC-ccccCccCcEEEECCchhccC
Confidence            999999999999998 21             11 1 4689999999999987 567789999999999876544

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=100.00  E-value=2e-38  Score=283.77  Aligned_cols=222  Identities=19%  Similarity=0.241  Sum_probs=184.6

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      +++++|++|||||++|||+++|++|+++|++|++++|+.++.   .+++   +.++.++.+|++|+++++++++.+.+ +
T Consensus         5 m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~---~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~-~   77 (257)
T 3tl3_A            5 MEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDV---VADL---GDRARFAAADVTDEAAVASALDLAET-M   77 (257)
T ss_dssp             -----CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHH---HHHT---CTTEEEEECCTTCHHHHHHHHHHHHH-H
T ss_pred             ceecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHH---HHhc---CCceEEEECCCCCHHHHHHHHHHHHH-h
Confidence            568899999999999999999999999999999999965433   2222   55789999999999999999999877 8


Q ss_pred             CCccEEEEcCCCCCC-----CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcC-------CCCCcEEEecCCCccccc
Q 022103          106 AALDILVNNAGVSFN-----DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRS-------PSKSRILNISSRLGTLSK  173 (302)
Q Consensus       106 g~id~lv~~aG~~~~-----~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~-------~~~~~iv~vsS~~~~~~~  173 (302)
                      +++|+||||||....     +..+.+.++|++++++|+.++++++++++|.|.+.       ...++||++||..+..+.
T Consensus        78 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  157 (257)
T 3tl3_A           78 GTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQ  157 (257)
T ss_dssp             SCEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--CCH
T ss_pred             CCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcCCC
Confidence            999999999998643     12358999999999999999999999999999872       257899999999887553


Q ss_pred             ccCcccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCc
Q 022103          174 VRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGF  253 (302)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~  253 (302)
                      +                                          ++..|++||+|+++|+++|+.|++++||+||+|+||+
T Consensus       158 ~------------------------------------------~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~  195 (257)
T 3tl3_A          158 I------------------------------------------GQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGL  195 (257)
T ss_dssp             H------------------------------------------HHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECS
T ss_pred             C------------------------------------------CCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecC
Confidence            2                                          2367999999999999999999999999999999999


Q ss_pred             ccCCCCCCC----------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcccC
Q 022103          254 TQTSMTQGQ----------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVK  299 (302)
Q Consensus       254 v~T~~~~~~----------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  299 (302)
                      |+|+|....                +..+|+++|..+++|++ +  .+++|+.+..+|+...
T Consensus       196 v~T~~~~~~~~~~~~~~~~~~~~~~r~~~p~dva~~v~~l~s-~--~~itG~~i~vdGG~~~  254 (257)
T 3tl3_A          196 FDTPLLASLPEEARASLGKQVPHPSRLGNPDEYGALAVHIIE-N--PMLNGEVIRLDGAIRM  254 (257)
T ss_dssp             BCCTTC---CHHHHHHHHHTSSSSCSCBCHHHHHHHHHHHHH-C--TTCCSCEEEESTTC--
T ss_pred             ccChhhhhccHHHHHHHHhcCCCCCCccCHHHHHHHHHHHhc-C--CCCCCCEEEECCCccC
Confidence            999997642                23589999999999997 3  6899999999998653

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=100.00  E-value=1.6e-37  Score=273.73  Aligned_cols=223  Identities=24%  Similarity=0.324  Sum_probs=196.2

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHh-hCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLS-EKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~-~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      ++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++. ..+.++.++.+|++|+++++++++++.+.+++
T Consensus         1 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   80 (235)
T 3l77_A            1 EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGD   80 (235)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCC
Confidence            46899999999999999999999999999999999999998888876 44678999999999999999999999999999


Q ss_pred             ccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchh
Q 022103          108 LDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDE  186 (302)
Q Consensus       108 id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~  186 (302)
                      +|+||||||.... ++.+.+.++|++++++|+.++++++++++|.|.+.  .+++|+++|..+..+.+            
T Consensus        81 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--~~~ii~~sS~~~~~~~~------------  146 (235)
T 3l77_A           81 VDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRT--GGLALVTTSDVSARLIP------------  146 (235)
T ss_dssp             CSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEECCGGGSSCCT------------
T ss_pred             CCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc--CCcEEEEecchhcccCC------------
Confidence            9999999998754 57889999999999999999999999999999553  68899999987764432            


Q ss_pred             hhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCCC---
Q 022103          187 ELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQG---  263 (302)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~~---  263 (302)
                                                    +...|++||+++++|+++++.+  ..||+|++|+||+|+|+|.....   
T Consensus       147 ------------------------------~~~~Y~~sKaa~~~~~~~l~~~--~~~i~v~~v~PG~v~T~~~~~~~~~~  194 (235)
T 3l77_A          147 ------------------------------YGGGYVSTKWAARALVRTFQIE--NPDVRFFELRPGAVDTYFGGSKPGKP  194 (235)
T ss_dssp             ------------------------------TCHHHHHHHHHHHHHHHHHHHH--CTTSEEEEEEECSBSSSTTTCCSCCC
T ss_pred             ------------------------------CcchHHHHHHHHHHHHHHHhhc--CCCeEEEEEeCCccccccccccCCcc
Confidence                                          2367999999999999999544  67999999999999999977643   


Q ss_pred             ----CCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          264 ----SHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       264 ----~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                          ..+|+++|..+++|+. ++....+|.+++.++...
T Consensus       195 ~~~~~~~p~dva~~v~~l~~-~~~~~~~~~~~~~~~~~~  232 (235)
T 3l77_A          195 KEKGYLKPDEIAEAVRCLLK-LPKDVRVEELMLRSVYQR  232 (235)
T ss_dssp             GGGTCBCHHHHHHHHHHHHT-SCTTCCCCEEEECCTTSC
T ss_pred             cccCCCCHHHHHHHHHHHHc-CCCCCccceEEEeecccC
Confidence                3689999999999998 677789999999887654

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=100.00  E-value=1e-37  Score=278.83  Aligned_cols=225  Identities=24%  Similarity=0.321  Sum_probs=197.2

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      +++|+++||||++|||+++|++|+++|++|++++|+.+  +...+++.+.+.++.++.+|++|+++++++++++.+++++
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   79 (255)
T 2q2v_A            2 LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP--APALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFGG   79 (255)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC--HHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHSS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            67899999999999999999999999999999999876  4556666666667889999999999999999999999999


Q ss_pred             ccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchh
Q 022103          108 LDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDE  186 (302)
Q Consensus       108 id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~  186 (302)
                      +|+||||||.... ++.+.+.++|++++++|+.++++++++++|.|.++ +.++||++||..+..+.+            
T Consensus        80 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~~------------  146 (255)
T 2q2v_A           80 VDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRAR-NWGRIINIASVHGLVGST------------  146 (255)
T ss_dssp             CSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEEECCGGGTSCCT------------
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEEEEcCchhccCCC------------
Confidence            9999999998654 56788999999999999999999999999999887 569999999988865432            


Q ss_pred             hhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCC-----
Q 022103          187 ELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG-----  261 (302)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~-----  261 (302)
                                                    ++..|++||++++.++++++.|++++||+||+|+||+++|+|...     
T Consensus       147 ------------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~  196 (255)
T 2q2v_A          147 ------------------------------GKAAYVAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPLVQKQIDDR  196 (255)
T ss_dssp             ------------------------------TBHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHHHHHHHHHH
T ss_pred             ------------------------------CchhHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcchhhhcccc
Confidence                                          247899999999999999999999999999999999999986321     


Q ss_pred             ---------------------CCCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          262 ---------------------QGSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       262 ---------------------~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                                           ....+|+++|..+++++. ++..+++|++|..+++..
T Consensus       197 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s-~~~~~~tG~~~~vdgG~~  253 (255)
T 2q2v_A          197 AANGGDPLQAQHDLLAEKQPSLAFVTPEHLGELVLFLCS-EAGSQVRGAAWNVDGGWL  253 (255)
T ss_dssp             HHHTCCHHHHHHHHHTTTCTTCCCBCHHHHHHHHHHHTS-GGGTTCCSCEEEESTTGG
T ss_pred             cccccchHHHHHHHHhccCCCCCCcCHHHHHHHHHHHhC-CccCCCCCCEEEECCCcc
Confidence                                 023579999999999987 566779999999998854

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=100.00  E-value=8.7e-39  Score=288.35  Aligned_cols=220  Identities=23%  Similarity=0.230  Sum_probs=191.9

Q ss_pred             cccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhh
Q 022103           25 KWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSN  104 (302)
Q Consensus        25 ~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~  104 (302)
                      ..++++|++|||||++|||+++|++|+++|++|++++|+.+.++           ....+.+|++|.++++++++++.+.
T Consensus        23 m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~-----------~~~~~~~Dv~~~~~~~~~~~~~~~~   91 (266)
T 3uxy_A           23 MQGFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIA-----------ADLHLPGDLREAAYADGLPGAVAAG   91 (266)
T ss_dssp             ---CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSC-----------CSEECCCCTTSHHHHHHHHHHHHHH
T ss_pred             hhCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-----------hhhccCcCCCCHHHHHHHHHHHHHh
Confidence            45689999999999999999999999999999999999875432           2245589999999999999999999


Q ss_pred             CCCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCccccccc
Q 022103          105 FAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSIL  183 (302)
Q Consensus       105 ~g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~  183 (302)
                      ++++|+||||||.... ++.+.+.++|++++++|+.++++++++++|.|.++ +.++||++||..+..+.+         
T Consensus        92 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~iv~isS~~~~~~~~---------  161 (266)
T 3uxy_A           92 LGRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAA-GGGAIVNVASCWGLRPGP---------  161 (266)
T ss_dssp             HSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCSBTTBCCT---------
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEECCHHhCCCCC---------
Confidence            9999999999998755 57889999999999999999999999999999886 579999999998875532         


Q ss_pred             chhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCC--
Q 022103          184 EDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG--  261 (302)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~--  261 (302)
                                                       ++.+|++||+|++.|+++++.|++++||+||+|+||+|+|+|.+.  
T Consensus       162 ---------------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~  208 (266)
T 3uxy_A          162 ---------------------------------GHALYCLTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGF  208 (266)
T ss_dssp             ---------------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHH
T ss_pred             ---------------------------------CChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhh
Confidence                                             247899999999999999999999999999999999999987432  


Q ss_pred             --------------------CCCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcccC
Q 022103          262 --------------------QGSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVK  299 (302)
Q Consensus       262 --------------------~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  299 (302)
                                          .+..+|+++|..+++|++ +...+++|+++..+|+...
T Consensus       209 ~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s-~~~~~itG~~i~vdGG~~~  265 (266)
T 3uxy_A          209 AKRGFDPDRAVAELGRTVPLGRIAEPEDIADVVLFLAS-DAARYLCGSLVEVNGGKAV  265 (266)
T ss_dssp             HHTTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTCCC
T ss_pred             hcccccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC-chhcCCcCCEEEECcCEeC
Confidence                                123589999999999997 6778899999999998653

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=100.00  E-value=8.8e-38  Score=280.06  Aligned_cols=231  Identities=21%  Similarity=0.232  Sum_probs=196.5

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhh-HHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhh
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVER-GQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSN  104 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~-~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~  104 (302)
                      +++.+|+++||||++|||+++|++|+++|++|++++|+.++ .+...+.+.+.+.++.++.+|++|+++++++++++.+.
T Consensus         3 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   82 (264)
T 3i4f_A            3 LGRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSH   82 (264)
T ss_dssp             ---CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cccccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            34567999999999999999999999999999999777654 45555555555678999999999999999999999999


Q ss_pred             CCCccEEEEcCCC--CCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcc-cccccCcccc
Q 022103          105 FAALDILVNNAGV--SFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGT-LSKVRNPNIK  180 (302)
Q Consensus       105 ~g~id~lv~~aG~--~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~-~~~~~~~~~~  180 (302)
                      ++++|+||||||.  ... ++.+.+.++|++++++|+.++++++++++|.|.++ ..++||++||.... ...       
T Consensus        83 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~g~iv~iss~~~~~~~~-------  154 (264)
T 3i4f_A           83 FGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQ-NFGRIINYGFQGADSAPG-------  154 (264)
T ss_dssp             HSCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCTTGGGCCC-------
T ss_pred             hCCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhc-CCCeEEEEeechhcccCC-------
Confidence            9999999999994  332 56788999999999999999999999999999887 57999999987432 110       


Q ss_pred             cccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCC
Q 022103          181 SILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ  260 (302)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~  260 (302)
                                                        .++...|++||+|++.|+++|+.|++++||+|++|+||+|+|+|..
T Consensus       155 ----------------------------------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~  200 (264)
T 3i4f_A          155 ----------------------------------WIYRSAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKE  200 (264)
T ss_dssp             ----------------------------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGS
T ss_pred             ----------------------------------CCCCchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccch
Confidence                                              1234789999999999999999999999999999999999999976


Q ss_pred             CC---------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcccC
Q 022103          261 GQ---------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVK  299 (302)
Q Consensus       261 ~~---------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  299 (302)
                      ..               ...+|+++|..+++|+. +...+++|+++..+|+...
T Consensus       201 ~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~l~s-~~~~~itG~~i~vdGG~~~  253 (264)
T 3i4f_A          201 ATIQEARQLKEHNTPIGRSGTGEDIARTISFLCE-DDSDMITGTIIEVTGAVDV  253 (264)
T ss_dssp             CCHHHHHHC--------CCCCHHHHHHHHHHHHS-GGGTTCCSCEEEESCSCCC
T ss_pred             hccHHHHHHHhhcCCCCCCcCHHHHHHHHHHHcC-cccCCCCCcEEEEcCceee
Confidence            53               23579999999999997 5677899999999998654

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=100.00  E-value=4.7e-38  Score=288.29  Aligned_cols=213  Identities=23%  Similarity=0.311  Sum_probs=193.1

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++...+.++.++.+|++|.++++++++++.+.++
T Consensus        28 ~l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  107 (301)
T 3tjr_A           28 GFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLG  107 (301)
T ss_dssp             CSTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCC
Confidence            58999999999999999999999999999999999999999999999988888999999999999999999999999999


Q ss_pred             CccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccch
Q 022103          107 ALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILED  185 (302)
Q Consensus       107 ~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~  185 (302)
                      ++|+||||||.... ++.+.+.++|+.++++|+.|+++++++++|.|.+++..++||++||..+..+.+           
T Consensus       108 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------  176 (301)
T 3tjr_A          108 GVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNA-----------  176 (301)
T ss_dssp             SCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCT-----------
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCC-----------
Confidence            99999999998754 577899999999999999999999999999998874468999999999876533           


Q ss_pred             hhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC---
Q 022103          186 EELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ---  262 (302)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~---  262 (302)
                                                     ++..|++||+|++.|+++|+.|++++||+|++|+||+|+|+|....   
T Consensus       177 -------------------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~  225 (301)
T 3tjr_A          177 -------------------------------GLGTYGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKLVSNSERI  225 (301)
T ss_dssp             -------------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHHHHHHHH
T ss_pred             -------------------------------CchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCccccccccccccc
Confidence                                           2478999999999999999999999999999999999999985421   


Q ss_pred             ----------------------CCCCHHHHHHHHHHHhhcC
Q 022103          263 ----------------------GSHTADEAADVGARLLLLH  281 (302)
Q Consensus       263 ----------------------~~~~~~~~a~~~~~l~~~~  281 (302)
                                            ...+|+++|..++..+..+
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~i~~~l~~~  266 (301)
T 3tjr_A          226 RGADYGMSATPEGAFGPLPTQDESVSADDVARLTADAILAN  266 (301)
T ss_dssp             C----------------------CCCHHHHHHHHHHHHHHT
T ss_pred             cchhhccccChhhhccccccccCCCCHHHHHHHHHHHHhcC
Confidence                                  1358999999999998743

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=100.00  E-value=5e-38  Score=283.68  Aligned_cols=221  Identities=26%  Similarity=0.308  Sum_probs=192.3

Q ss_pred             cccccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHH
Q 022103           23 STKWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFK  102 (302)
Q Consensus        23 ~~~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~  102 (302)
                      ......++|++|||||++|||+++|++|+++|++|++++|+.+..          ...+..+.+|++|+++++++++++.
T Consensus         7 ~~~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~----------~~~~~~~~~Dv~~~~~v~~~~~~~~   76 (269)
T 3vtz_A            7 HHMEEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSD----------VNVSDHFKIDVTNEEEVKEAVEKTT   76 (269)
T ss_dssp             ---CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--C----------TTSSEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhc----------cCceeEEEecCCCHHHHHHHHHHHH
Confidence            345678999999999999999999999999999999999987543          1256789999999999999999999


Q ss_pred             hhCCCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCccccc
Q 022103          103 SNFAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKS  181 (302)
Q Consensus       103 ~~~g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~  181 (302)
                      +.++++|+||||||.... ++.+.+.++|++++++|+.++++++++++|.|.++ +.++||++||..+..+.+       
T Consensus        77 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~~~~-------  148 (269)
T 3vtz_A           77 KKYGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAI-GHGSIINIASVQSYAATK-------  148 (269)
T ss_dssp             HHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTSBCT-------
T ss_pred             HHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCCEEEEECchhhccCCC-------
Confidence            999999999999998754 57888999999999999999999999999999876 579999999998875532       


Q ss_pred             ccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCC
Q 022103          182 ILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG  261 (302)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~  261 (302)
                                                         ++..|++||+|+++|+++|+.|+++ ||+||+|+||+|+|+|...
T Consensus       149 -----------------------------------~~~~Y~asKaa~~~l~~~la~e~~~-~i~vn~v~PG~v~T~~~~~  192 (269)
T 3vtz_A          149 -----------------------------------NAAAYVTSKHALLGLTRSVAIDYAP-KIRCNAVCPGTIMTPMVIK  192 (269)
T ss_dssp             -----------------------------------TCHHHHHHHHHHHHHHHHHHHHHTT-TEEEEEEEECSBCCHHHHH
T ss_pred             -----------------------------------CChhHHHHHHHHHHHHHHHHHHhcC-CCEEEEEEECCCcCcchhh
Confidence                                               2478999999999999999999988 8999999999999987421


Q ss_pred             --------------------------CCCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          262 --------------------------QGSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       262 --------------------------~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                                                .+..+|+++|..+++|++ +...+++|+++..+|+..
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s-~~~~~itG~~i~vdGG~~  254 (269)
T 3vtz_A          193 AAKMEVGEDENAVERKIEEWGRQHPMGRIGRPEEVAEVVAFLAS-DRSSFITGACLTVDGGLL  254 (269)
T ss_dssp             HHHHHHCCSTTHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGG
T ss_pred             hhhccccccchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC-CccCCCcCcEEEECCCcc
Confidence                                      123579999999999997 677889999999999864

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=100.00  E-value=5.9e-38  Score=281.17  Aligned_cols=223  Identities=22%  Similarity=0.240  Sum_probs=193.3

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhh-CC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSN-FA  106 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~-~g  106 (302)
                      +++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++...+.++.++.+|++|+++++++++++.+. ++
T Consensus         3 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g   82 (260)
T 2qq5_A            3 MNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQG   82 (260)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHTT
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            67899999999999999999999999999999999999988888888766778899999999999999999999886 89


Q ss_pred             CccEEEEcCC--CC------CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcc
Q 022103          107 ALDILVNNAG--VS------FNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPN  178 (302)
Q Consensus       107 ~id~lv~~aG--~~------~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~  178 (302)
                      ++|+||||||  ..      ..++.+.+.++|++++++|+.++++++++++|.|.++ +.++||++||..+..+.     
T Consensus        83 ~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~-----  156 (260)
T 2qq5_A           83 RLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPA-GQGLIVVISSPGSLQYM-----  156 (260)
T ss_dssp             CCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGG-TCCEEEEECCGGGTSCC-----
T ss_pred             CceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhc-CCcEEEEEcChhhcCCC-----
Confidence            9999999995  32      2356788999999999999999999999999999876 56999999998875321     


Q ss_pred             cccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCC
Q 022103          179 IKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSM  258 (302)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~  258 (302)
                                                            +..+|++||++++.|+++++.|++++||+||+|+||+|+|+|
T Consensus       157 --------------------------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~  198 (260)
T 2qq5_A          157 --------------------------------------FNVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTEL  198 (260)
T ss_dssp             --------------------------------------SSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTT
T ss_pred             --------------------------------------CCCchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHH
Confidence                                                  136799999999999999999999999999999999999999


Q ss_pred             CCCCC----------------C----CCHHHHHHHHHHHhhcCCC-CCCCcceeecCC
Q 022103          259 TQGQG----------------S----HTADEAADVGARLLLLHPQ-QLPTAKFYIGLD  295 (302)
Q Consensus       259 ~~~~~----------------~----~~~~~~a~~~~~l~~~~~~-~~~~G~~~~~~~  295 (302)
                      .....                .    .+|+++|..+++|++ ++. .+++|+++..++
T Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~v~~l~s-~~~~~~itG~~i~~~~  255 (260)
T 2qq5_A          199 LKEHMAKEEVLQDPVLKQFKSAFSSAETTELSGKCVVALAT-DPNILSLSGKVLPSCD  255 (260)
T ss_dssp             C----------------------CHHHHHHHHHHHHHHHHT-CTTGGGGTTCEEEHHH
T ss_pred             HHHhhccccccchhHHHHHHhhhccCCCHHHHHHHHHHHhc-Ccccccccceeechhh
Confidence            65310                0    258999999999997 444 479999988654

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=7.9e-38  Score=282.60  Aligned_cols=227  Identities=26%  Similarity=0.297  Sum_probs=191.3

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHH---hhCCCceeEEEeeCCCHHHHHHHHHHHHh
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESL---SEKGLPVNFFQLDVSDPSSIEAFVSWFKS  103 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l---~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~  103 (302)
                      .+++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++   ...+.++.++.+|++|+++++++++++.+
T Consensus         3 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   82 (278)
T 1spx_A            3 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG   82 (278)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHH
Confidence            367899999999999999999999999999999999999988888887   33345788999999999999999999999


Q ss_pred             hCCCccEEEEcCCCCCC-CCCCC----CHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCc-ccccccCc
Q 022103          104 NFAALDILVNNAGVSFN-DIYKN----TVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLG-TLSKVRNP  177 (302)
Q Consensus       104 ~~g~id~lv~~aG~~~~-~~~~~----~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~-~~~~~~~~  177 (302)
                      ++|++|+||||||.... ++.+.    +.++|++++++|+.++++++++++|.|.++ + ++||++||..+ ..+.+   
T Consensus        83 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~-g~iv~isS~~~~~~~~~---  157 (278)
T 1spx_A           83 KFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSST-K-GEIVNISSIASGLHATP---  157 (278)
T ss_dssp             HHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-T-CEEEEECCTTSSSSCCT---
T ss_pred             HcCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc-C-CeEEEEecccccccCCC---
Confidence            99999999999997643 45666    999999999999999999999999999876 3 99999999887 54322   


Q ss_pred             ccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCC
Q 022103          178 NIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTS  257 (302)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~  257 (302)
                                                             ++..|++||++++.++++++.|++++||+||+|+||+++|+
T Consensus       158 ---------------------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~  198 (278)
T 1spx_A          158 ---------------------------------------DFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATG  198 (278)
T ss_dssp             ---------------------------------------TSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCC
T ss_pred             ---------------------------------------CccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCc
Confidence                                                   23679999999999999999999999999999999999999


Q ss_pred             CCCCC------------------------CCCCHHHHHHHHHHHhhcCCCCC-CCcceeecCCccc
Q 022103          258 MTQGQ------------------------GSHTADEAADVGARLLLLHPQQL-PTAKFYIGLDPFV  298 (302)
Q Consensus       258 ~~~~~------------------------~~~~~~~~a~~~~~l~~~~~~~~-~~G~~~~~~~~~~  298 (302)
                      |....                        ...+|+++|..+++++. ++..+ ++|+++..+++..
T Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~v~~l~s-~~~~~~~tG~~~~vdgG~~  263 (278)
T 1spx_A          199 FGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAEVIAFLAD-RKTSSYIIGHQLVVDGGSS  263 (278)
T ss_dssp             C--------------HHHHHHHHHHCTTSSCBCHHHHHHHHHHHHC-HHHHTTCCSCEEEESTTGG
T ss_pred             cccccccCchhhhhhhHHHHHHHhcCCCcCCCCHHHHHHHHHHHcC-ccccCcccCcEEEECCCcc
Confidence            85431                        12579999999999986 44455 8999999998854

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=100.00  E-value=4.5e-38  Score=281.01  Aligned_cols=225  Identities=22%  Similarity=0.272  Sum_probs=198.8

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++   +.++.++.+|++|+++++++++++.+.++
T Consensus         3 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   79 (253)
T 1hxh_A            3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL---GERSMFVRHDVSSEADWTLVMAAVQRRLG   79 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH---CTTEEEECCCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---CCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            478999999999999999999999999999999999998888877776   45788999999999999999999999999


Q ss_pred             CccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccch
Q 022103          107 ALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILED  185 (302)
Q Consensus       107 ~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~  185 (302)
                      ++|+||||||.... ++.+.+.++|++++++|+.++++++++++|.|.++ + ++||++||..+..+.+           
T Consensus        80 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~-~-g~iv~isS~~~~~~~~-----------  146 (253)
T 1hxh_A           80 TLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKET-G-GSIINMASVSSWLPIE-----------  146 (253)
T ss_dssp             SCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT-C-EEEEEECCGGGTSCCT-----------
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHc-C-CEEEEEcchhhcCCCC-----------
Confidence            99999999998654 57788999999999999999999999999999877 4 9999999988865432           


Q ss_pred             hhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCC--CcEEEEeecCcccCCCCCC--
Q 022103          186 EELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGE--GISVNSYCPGFTQTSMTQG--  261 (302)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~--gI~V~~v~PG~v~T~~~~~--  261 (302)
                                                     ++..|++||++++.++++++.|++++  ||+|++|+||+++|+|...  
T Consensus       147 -------------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~  195 (253)
T 1hxh_A          147 -------------------------------QYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASL  195 (253)
T ss_dssp             -------------------------------TBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHS
T ss_pred             -------------------------------CCccHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchhhhcc
Confidence                                           24689999999999999999999887  9999999999999987321  


Q ss_pred             --------------C----CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcccC
Q 022103          262 --------------Q----GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVK  299 (302)
Q Consensus       262 --------------~----~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  299 (302)
                                    .    ...+|+++|..+++++. ++..+++|+++..+|+...
T Consensus       196 ~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s-~~~~~~tG~~~~vdgG~~~  250 (253)
T 1hxh_A          196 PKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLAS-DESSVMSGSELHADNSILG  250 (253)
T ss_dssp             CTTCCHHHHBCBTTTBTTCCEECHHHHHHHHHHHHS-GGGTTCCSCEEEESSSCTT
T ss_pred             chhhhHHHHhhhhccCccCCCCCHHHHHHHHHHHcC-ccccCCCCcEEEECCCccc
Confidence                          0    12479999999999987 5677899999999998654

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=100.00  E-value=7.4e-38  Score=278.75  Aligned_cols=225  Identities=28%  Similarity=0.357  Sum_probs=200.4

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEE-ecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILT-ARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~-~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      +++|+++||||++|||+++|++|+++|++|+++ .|+.+++++..+++.+.+.++.++.+|+++.++++++++++.+.++
T Consensus         5 l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   84 (255)
T 3icc_A            5 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ   84 (255)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHhc
Confidence            689999999999999999999999999999885 7788888889999988888899999999999999999999987654


Q ss_pred             ------CccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCccc
Q 022103          107 ------ALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNI  179 (302)
Q Consensus       107 ------~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~  179 (302)
                            ++|+||||||.... .+.+.+.++|++++++|+.++++++++++|.|.+   .++||++||..+..+.+     
T Consensus        85 ~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~~~iv~isS~~~~~~~~-----  156 (255)
T 3icc_A           85 NRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRD---NSRIINISSAATRISLP-----  156 (255)
T ss_dssp             HHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE---EEEEEEECCGGGTSCCT-----
T ss_pred             ccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCC---CCEEEEeCChhhccCCC-----
Confidence                  49999999998654 5678899999999999999999999999999954   48999999998875532     


Q ss_pred             ccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCC
Q 022103          180 KSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMT  259 (302)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~  259 (302)
                                                           .+..|++||+|++.|+++|+.|++++||+|++|+||+++|+|.
T Consensus       157 -------------------------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~  199 (255)
T 3icc_A          157 -------------------------------------DFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMN  199 (255)
T ss_dssp             -------------------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSS
T ss_pred             -------------------------------------CcchhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccch
Confidence                                                 2478999999999999999999999999999999999999997


Q ss_pred             CCCC-----------------CCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          260 QGQG-----------------SHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       260 ~~~~-----------------~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                      +...                 ..+|+++|..+++|+. +...+++|+++..+|+..
T Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s-~~~~~~tG~~i~vdgG~~  254 (255)
T 3icc_A          200 AELLSDPMMKQYATTISAFNRLGEVEDIADTAAFLAS-PDSRWVTGQLIDVSGGSC  254 (255)
T ss_dssp             TTTTTSHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESSSTT
T ss_pred             hhhcccHHHHHhhhccCCcCCCCCHHHHHHHHHHHhC-cccCCccCCEEEecCCee
Confidence            7642                 2479999999999987 677889999999999853

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=100.00  E-value=5.7e-38  Score=281.99  Aligned_cols=222  Identities=23%  Similarity=0.261  Sum_probs=193.6

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      +.+++|++|||||++|||+++|++|+++|++|++++|+.++.+         ..++.++.+|++|+++++++++++.+.+
T Consensus        24 ~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~---------~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   94 (260)
T 3un1_A           24 MRNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSA---------DPDIHTVAGDISKPETADRIVREGIERF   94 (260)
T ss_dssp             HHTTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCS---------STTEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred             hCcCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc---------cCceEEEEccCCCHHHHHHHHHHHHHHC
Confidence            4578999999999999999999999999999999999875422         2368899999999999999999999999


Q ss_pred             CCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccc
Q 022103          106 AALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILE  184 (302)
Q Consensus       106 g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~  184 (302)
                      |++|+||||||+... ++.+.+.++|++++++|+.|+++++++++|.|.++ +.++||++||..+..+...         
T Consensus        95 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~iv~isS~~~~~~~~~---------  164 (260)
T 3un1_A           95 GRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQ-GSGHIVSITTSLVDQPMVG---------  164 (260)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEEECCTTTTSCBTT---------
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCcEEEEEechhhccCCCC---------
Confidence            999999999998754 57889999999999999999999999999999887 5799999999877543221         


Q ss_pred             hhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC--
Q 022103          185 DEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ--  262 (302)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~--  262 (302)
                                                     .+...|++||+|+++|+++++.|++++||+||+|+||+|+|+|....  
T Consensus       165 -------------------------------~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~  213 (260)
T 3un1_A          165 -------------------------------MPSALASLTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPAETH  213 (260)
T ss_dssp             -------------------------------CCCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCGGGH
T ss_pred             -------------------------------CccHHHHHHHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCHHHH
Confidence                                           12367999999999999999999999999999999999999997542  


Q ss_pred             ----------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcccCC
Q 022103          263 ----------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVKS  300 (302)
Q Consensus       263 ----------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~  300 (302)
                                +..+|+++|..+++|.   ...+++|+++..+|+...+
T Consensus       214 ~~~~~~~p~~r~~~~~dva~av~~L~---~~~~itG~~i~vdGG~~~~  258 (260)
T 3un1_A          214 STLAGLHPVGRMGEIRDVVDAVLYLE---HAGFITGEILHVDGGQNAG  258 (260)
T ss_dssp             HHHHTTSTTSSCBCHHHHHHHHHHHH---HCTTCCSCEEEESTTGGGC
T ss_pred             HHHhccCCCCCCcCHHHHHHHHHHhc---ccCCCCCcEEEECCCeecc
Confidence                      2357999999999993   4567899999999986543

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=100.00  E-value=2e-37  Score=280.63  Aligned_cols=230  Identities=22%  Similarity=0.237  Sum_probs=199.3

Q ss_pred             ccccccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHH
Q 022103           22 SSTKWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWF  101 (302)
Q Consensus        22 ~~~~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~  101 (302)
                      ++...++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++   +.++.++.+|++|.++++++++++
T Consensus        22 m~~~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~   98 (281)
T 3ppi_A           22 MVTIKQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADEL---GNRAEFVSTNVTSEDSVLAAIEAA   98 (281)
T ss_dssp             --CCGGGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHH
T ss_pred             hhhhhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHH
Confidence            33456789999999999999999999999999999999999999988888877   457899999999999999999999


Q ss_pred             HhhCCCccEEEEc-CCCCCC-CC-----CCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcC-----CCCCcEEEecCCCc
Q 022103          102 KSNFAALDILVNN-AGVSFN-DI-----YKNTVEHAETVIRTNFYGAKLLTESLLPLFRRS-----PSKSRILNISSRLG  169 (302)
Q Consensus       102 ~~~~g~id~lv~~-aG~~~~-~~-----~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~-----~~~~~iv~vsS~~~  169 (302)
                       ++++++|++||| +|.... .+     .+.+.++|++++++|+.+++++++.+++.|.+.     ...++||++||..+
T Consensus        99 -~~~~~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~  177 (281)
T 3ppi_A           99 -NQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAG  177 (281)
T ss_dssp             -TTSSEEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGG
T ss_pred             -HHhCCCCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccc
Confidence             888999999999 554432 22     368899999999999999999999999999862     25689999999988


Q ss_pred             ccccccCcccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEe
Q 022103          170 TLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSY  249 (302)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v  249 (302)
                      ..+.+                                          ++..|++||+|++.|+++|+.|++++||+|++|
T Consensus       178 ~~~~~------------------------------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v  215 (281)
T 3ppi_A          178 YEGQI------------------------------------------GQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTI  215 (281)
T ss_dssp             TSCCT------------------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEE
T ss_pred             cCCCC------------------------------------------CCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEE
Confidence            75532                                          247899999999999999999999999999999


Q ss_pred             ecCcccCCCCCCC----------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcccCC
Q 022103          250 CPGFTQTSMTQGQ----------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVKS  300 (302)
Q Consensus       250 ~PG~v~T~~~~~~----------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~  300 (302)
                      +||+|+|+|.+..                ...+|+++|..+++|+. +  .+++|+++..+|+...+
T Consensus       216 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~~l~s-~--~~~tG~~i~vdGG~~~~  279 (281)
T 3ppi_A          216 APGTMKTPIMESVGEEALAKFAANIPFPKRLGTPDEFADAAAFLLT-N--GYINGEVMRLDGAQRFT  279 (281)
T ss_dssp             EECSBCCHHHHTTCHHHHHHHHHTCCSSSSCBCHHHHHHHHHHHHH-C--SSCCSCEEEESTTCCCC
T ss_pred             ecCcCCchhhhcccHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHc-C--CCcCCcEEEECCCcccC
Confidence            9999999986542                34589999999999997 3  57999999999986543

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=6.5e-38  Score=282.05  Aligned_cols=222  Identities=25%  Similarity=0.272  Sum_probs=194.1

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.   .++.++.+|++|+++++++++++.+.++
T Consensus         3 ~l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~D~~~~~~v~~~~~~~~~~~g   79 (263)
T 2a4k_A            3 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALE---AEAIAVVADVSDPKAVEAVFAEALEEFG   79 (263)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCC---SSEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc---CceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            3688999999999999999999999999999999999988877766653   4788999999999999999999999999


Q ss_pred             CccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccch
Q 022103          107 ALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILED  185 (302)
Q Consensus       107 ~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~  185 (302)
                      ++|+||||||.... ++.+.+.++|++++++|+.++++++++++|.| ++  .++||++||..+. +.+           
T Consensus        80 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~-~~--~g~iv~isS~~~~-~~~-----------  144 (263)
T 2a4k_A           80 RLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVL-EE--GGSLVLTGSVAGL-GAF-----------  144 (263)
T ss_dssp             CCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHC-CT--TCEEEEECCCTTC-CHH-----------
T ss_pred             CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH-hc--CCEEEEEecchhc-CCC-----------
Confidence            99999999998654 57788999999999999999999999999999 43  6899999999886 421           


Q ss_pred             hhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC---
Q 022103          186 EELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ---  262 (302)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~---  262 (302)
                                                     ++..|++||++++.++++++.|++++||+||+|+||+|+|+|....   
T Consensus       145 -------------------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~  193 (263)
T 2a4k_A          145 -------------------------------GLAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLPPW  193 (263)
T ss_dssp             -------------------------------HHHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSCHH
T ss_pred             -------------------------------CcHHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhhcCHH
Confidence                                           1367999999999999999999999999999999999999986542   


Q ss_pred             ------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          263 ------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       263 ------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                                  ...+|+++|..+++++. ++..+++|+++..+|+..
T Consensus       194 ~~~~~~~~~p~~~~~~p~dvA~~v~~l~s-~~~~~~tG~~i~vdgG~~  240 (263)
T 2a4k_A          194 AWEQEVGASPLGRAGRPEEVAQAALFLLS-EESAYITGQALYVDGGRS  240 (263)
T ss_dssp             HHHHHHHTSTTCSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTTT
T ss_pred             HHHHHHhcCCCCCCcCHHHHHHHHHHHhC-ccccCCcCCEEEECCCcc
Confidence                        23589999999999987 567789999999998854

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=100.00  E-value=5e-37  Score=278.54  Aligned_cols=228  Identities=21%  Similarity=0.206  Sum_probs=198.9

Q ss_pred             cccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhh-HHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHh
Q 022103           25 KWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVER-GQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKS  103 (302)
Q Consensus        25 ~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~-~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~  103 (302)
                      .+++++|+++||||++|||+++|++|+++|++|++++|+.++ .+...+++.+.+.++.++.+|++|.++++++++++.+
T Consensus        24 ~~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  103 (283)
T 1g0o_A           24 SASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVK  103 (283)
T ss_dssp             GGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHH
Confidence            356889999999999999999999999999999999998754 5666677777777899999999999999999999999


Q ss_pred             hCCCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccc
Q 022103          104 NFAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSI  182 (302)
Q Consensus       104 ~~g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~  182 (302)
                      .++++|+||||||.... ++.+.+.++|++++++|+.++++++++++|.|.   ..++||++||..+..+.+        
T Consensus       104 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~---~~g~iv~isS~~~~~~~~--------  172 (283)
T 1g0o_A          104 IFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLE---IGGRLILMGSITGQAKAV--------  172 (283)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSC---TTCEEEEECCGGGTCSSC--------
T ss_pred             HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHh---cCCeEEEEechhhccCCC--------
Confidence            99999999999998654 577889999999999999999999999999993   368999999988764421        


Q ss_pred             cchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCC-
Q 022103          183 LEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG-  261 (302)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~-  261 (302)
                                                       +++..|++||++++.|+++++.|++++||+||+|+||+|+|+|... 
T Consensus       173 ---------------------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~  219 (283)
T 1g0o_A          173 ---------------------------------PKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAV  219 (283)
T ss_dssp             ---------------------------------SSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHH
T ss_pred             ---------------------------------CCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccchhhhhh
Confidence                                             1247899999999999999999999999999999999999986321 


Q ss_pred             --------------------------C-CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          262 --------------------------Q-GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       262 --------------------------~-~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                                                . +..+|+++|..+++|+. +...+++|+++..+|+.
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s-~~~~~itG~~i~vdgG~  281 (283)
T 1g0o_A          220 CREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIARVVCFLAS-NDGGWVTGKVIGIDGGA  281 (283)
T ss_dssp             GGGGSTTCTTCCHHHHHHHHHHHSCTTCSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTC
T ss_pred             hhhccccccccCHHHHHHHHhhcCCCCCCCcCHHHHHHHHHHHhC-ccccCcCCCEEEeCCCc
Confidence                                      1 12479999999999997 56778999999999875

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=1.5e-37  Score=278.09  Aligned_cols=222  Identities=23%  Similarity=0.231  Sum_probs=194.8

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.++ ++..+++.    + .++.+|++|.++++++++++.+.++
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~----~-~~~~~D~~~~~~~~~~~~~~~~~~g   76 (256)
T 2d1y_A            3 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIG----G-AFFQVDLEDERERVRFVEEAAYALG   76 (256)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHT----C-EEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhh----C-CEEEeeCCCHHHHHHHHHHHHHHcC
Confidence            4678999999999999999999999999999999999877 66666653    4 7889999999999999999999999


Q ss_pred             CccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccch
Q 022103          107 ALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILED  185 (302)
Q Consensus       107 ~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~  185 (302)
                      ++|+||||||.... ++.+.+.++|++++++|+.++++++++++|.|.++ +.++||++||..+..+.+           
T Consensus        77 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~-~~g~iv~isS~~~~~~~~-----------  144 (256)
T 2d1y_A           77 RVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKV-GGGAIVNVASVQGLFAEQ-----------  144 (256)
T ss_dssp             CCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTT-TCEEEEEECCGGGTSBCT-----------
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEEccccccCCCC-----------
Confidence            99999999998654 57788999999999999999999999999999876 579999999988865432           


Q ss_pred             hhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCC----
Q 022103          186 EELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG----  261 (302)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~----  261 (302)
                                                     ++..|++||++++.++++++.|++++||+||+|+||+++|+|...    
T Consensus       145 -------------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~  193 (256)
T 2d1y_A          145 -------------------------------ENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIAL  193 (256)
T ss_dssp             -------------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC-
T ss_pred             -------------------------------CChhHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCchhhhcccc
Confidence                                           236899999999999999999999999999999999999986321    


Q ss_pred             -----------------CCCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          262 -----------------QGSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       262 -----------------~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                                       ....+|+++|..+++++. ++..+++|+++..+++..
T Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~s-~~~~~~~G~~~~v~gG~~  246 (256)
T 2d1y_A          194 SPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLAS-EKASFITGAILPVDGGMT  246 (256)
T ss_dssp             -------CHHHHTTSTTSSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGG
T ss_pred             ccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC-chhcCCCCCEEEECCCcc
Confidence                             013579999999999987 566789999999998854

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=100.00  E-value=1.6e-37  Score=281.56  Aligned_cols=227  Identities=16%  Similarity=0.129  Sum_probs=198.3

Q ss_pred             ccccCcEEEEeCCC--chHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHh
Q 022103           26 WWSKETIAIVTGAN--KGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKS  103 (302)
Q Consensus        26 ~~~~~k~vlItGas--~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~  103 (302)
                      ..+++|+++||||+  +|||+++|++|+++|++|++++|+.  .++..+++.+...++.++.+|++|.++++++++++.+
T Consensus        22 ~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   99 (280)
T 3nrc_A           22 GFLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ--FKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGK   99 (280)
T ss_dssp             CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT--CHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch--HHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHH
Confidence            35789999999988  7799999999999999999999997  3445555555555789999999999999999999999


Q ss_pred             hCCCccEEEEcCCCCCC-----CCCC-CCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCc
Q 022103          104 NFAALDILVNNAGVSFN-----DIYK-NTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNP  177 (302)
Q Consensus       104 ~~g~id~lv~~aG~~~~-----~~~~-~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~  177 (302)
                      .++++|+||||||....     ++.+ .+.++|+.++++|+.++++++++++|.|.++  .++||++||..+..+.+   
T Consensus       100 ~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~--~g~iv~isS~~~~~~~~---  174 (280)
T 3nrc_A          100 VWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNR--NASMVALTYIGAEKAMP---  174 (280)
T ss_dssp             HCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT--TCEEEEEECGGGTSCCT---
T ss_pred             HcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcC--CCeEEEEeccccccCCC---
Confidence            99999999999998642     3344 8999999999999999999999999999875  69999999998875532   


Q ss_pred             ccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCC
Q 022103          178 NIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTS  257 (302)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~  257 (302)
                                                             ++..|++||+|++.|+++|+.|++++||+|++|+||+|+|+
T Consensus       175 ---------------------------------------~~~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~  215 (280)
T 3nrc_A          175 ---------------------------------------SYNTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTL  215 (280)
T ss_dssp             ---------------------------------------TTHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCS
T ss_pred             ---------------------------------------CchhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccch
Confidence                                                   24789999999999999999999999999999999999999


Q ss_pred             CCCCCC-----------------CCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcccC
Q 022103          258 MTQGQG-----------------SHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVK  299 (302)
Q Consensus       258 ~~~~~~-----------------~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  299 (302)
                      |.....                 ..+|+++|..+++|+. +...+++|+++..+|+...
T Consensus       216 ~~~~~~~~~~~~~~~~~~~p~~~~~~pedvA~~v~~l~s-~~~~~~tG~~i~vdgG~~~  273 (280)
T 3nrc_A          216 AASGISNFKKMLDYNAMVSPLKKNVDIMEVGNTVAFLCS-DMATGITGEVVHVDAGYHC  273 (280)
T ss_dssp             GGGGCTTHHHHHHHHHHHSTTCSCCCHHHHHHHHHHTTS-GGGTTCCSCEEEESTTGGG
T ss_pred             hhhcCcchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhC-cccCCcCCcEEEECCCccc
Confidence            976532                 3689999999999987 5677899999999998643

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=1.5e-37  Score=281.25  Aligned_cols=225  Identities=24%  Similarity=0.299  Sum_probs=190.1

Q ss_pred             cccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhh
Q 022103           25 KWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSN  104 (302)
Q Consensus        25 ~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~  104 (302)
                      ..+++ |++|||||++|||+++|++|+++|++|++++|+.+++++..+++... .++.++.+|++|+++++++++++.+.
T Consensus        17 ~~~~~-k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~   94 (272)
T 2nwq_A           17 GSHMS-STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAK-TRVLPLTLDVRDRAAMSAAVDNLPEE   94 (272)
T ss_dssp             ----C-CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTT-SCEEEEECCTTCHHHHHHHHHTCCGG
T ss_pred             CCCcC-cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcC-CcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            34566 99999999999999999999999999999999999988888888654 57889999999999999999999999


Q ss_pred             CCCccEEEEcCCCCC--CCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCC-cEEEecCCCcccccccCccccc
Q 022103          105 FAALDILVNNAGVSF--NDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKS-RILNISSRLGTLSKVRNPNIKS  181 (302)
Q Consensus       105 ~g~id~lv~~aG~~~--~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~-~iv~vsS~~~~~~~~~~~~~~~  181 (302)
                      ++++|+||||||...  .++.+.+.++|++++++|+.++++++++++|.|.++ +.+ +||++||..+..+.+       
T Consensus        95 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~-~~g~~IV~isS~~~~~~~~-------  166 (272)
T 2nwq_A           95 FATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAH-GAGASIVNLGSVAGKWPYP-------  166 (272)
T ss_dssp             GSSCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-CTTCEEEEECCGGGTSCCT-------
T ss_pred             hCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCcEEEEeCCchhccCCC-------
Confidence            999999999999864  367789999999999999999999999999999876 457 999999988865432       


Q ss_pred             ccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCC
Q 022103          182 ILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG  261 (302)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~  261 (302)
                                                         ++..|++||++++.|+++++.|++++||+||+|+||+++|+|...
T Consensus       167 -----------------------------------~~~~Y~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~  211 (272)
T 2nwq_A          167 -----------------------------------GSHVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLV  211 (272)
T ss_dssp             -----------------------------------TCHHHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC------
T ss_pred             -----------------------------------CCchHHHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcchhc
Confidence                                               247899999999999999999999999999999999999998542


Q ss_pred             C---------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCc
Q 022103          262 Q---------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDP  296 (302)
Q Consensus       262 ~---------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  296 (302)
                      .               ...+|+++|..+++++.  +...++|..+..++.
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~pedvA~~v~~l~s--~~~~~~g~~i~v~~~  259 (272)
T 2nwq_A          212 RFGGDQARYDKTYAGAHPIQPEDIAETIFWIMN--QPAHLNINSLEIMPV  259 (272)
T ss_dssp             --------------CCCCBCHHHHHHHHHHHHT--SCTTEEEEEEEEEET
T ss_pred             ccccchHHHHHhhccCCCCCHHHHHHHHHHHhC--CCccCccceEEEeec
Confidence            1               12579999999999997  345678887766554

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=100.00  E-value=5.7e-37  Score=278.46  Aligned_cols=226  Identities=18%  Similarity=0.199  Sum_probs=194.1

Q ss_pred             cccCcEEEEeCCC--chHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhh
Q 022103           27 WSKETIAIVTGAN--KGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSN  104 (302)
Q Consensus        27 ~~~~k~vlItGas--~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~  104 (302)
                      .+++|+++||||+  +|||+++|++|+++|++|++++|+.+ .++..+++.+..+.+.++.+|++|.++++++++++.+.
T Consensus        18 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   96 (285)
T 2p91_A           18 LLEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPK-LEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEEN   96 (285)
T ss_dssp             TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGG-GHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHH
Confidence            3789999999999  99999999999999999999999985 44455555443234788999999999999999999999


Q ss_pred             CCCccEEEEcCCCCC-----CCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCccc
Q 022103          105 FAALDILVNNAGVSF-----NDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNI  179 (302)
Q Consensus       105 ~g~id~lv~~aG~~~-----~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~  179 (302)
                      ++++|+||||||...     .++.+.+.++|+.++++|+.++++++++++|.|.++  .++||++||..+..+.+     
T Consensus        97 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--~g~iv~isS~~~~~~~~-----  169 (285)
T 2p91_A           97 WGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGR--NGAIVTLSYYGAEKVVP-----  169 (285)
T ss_dssp             TSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTS--CCEEEEEECGGGTSBCT-----
T ss_pred             cCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc--CCEEEEEccchhccCCC-----
Confidence            999999999999864     246678999999999999999999999999999754  58999999988765432     


Q ss_pred             ccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCC
Q 022103          180 KSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMT  259 (302)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~  259 (302)
                                                           ++..|++||++++.++++++.|++++||+||+|+||+|+|++.
T Consensus       170 -------------------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~  212 (285)
T 2p91_A          170 -------------------------------------HYNVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAA  212 (285)
T ss_dssp             -------------------------------------TTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC
T ss_pred             -------------------------------------CccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchh
Confidence                                                 2367999999999999999999999999999999999999986


Q ss_pred             CCC-----------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          260 QGQ-----------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       260 ~~~-----------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                      +..                 ...+|+++|..+++++. +...+++|+++..+++..
T Consensus       213 ~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~~~~l~s-~~~~~~tG~~~~vdgg~~  267 (285)
T 2p91_A          213 YSITGFHLLMEHTTKVNPFGKPITIEDVGDTAVFLCS-DWARAITGEVVHVDNGYH  267 (285)
T ss_dssp             --CTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHTS-GGGTTCCSCEEEESTTGG
T ss_pred             hcccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcC-CcccCCCCCEEEECCCcc
Confidence            542                 13589999999999986 566779999999888753

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=100.00  E-value=4.3e-37  Score=275.83  Aligned_cols=227  Identities=27%  Similarity=0.304  Sum_probs=198.5

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      +++++|+++||||++|||+++|++|+++|++|++++|+.++++...+++..   ++.++.+|++|.++++++++++.+++
T Consensus         8 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~D~~d~~~v~~~~~~~~~~~   84 (263)
T 3ak4_A            8 FDLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLEN---GGFAVEVDVTKRASVDAAMQKAIDAL   84 (263)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTT---CCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc---CCeEEEEeCCCHHHHHHHHHHHHHHc
Confidence            457899999999999999999999999999999999999887776665543   67889999999999999999999999


Q ss_pred             CCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccc
Q 022103          106 AALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILE  184 (302)
Q Consensus       106 g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~  184 (302)
                      |++|+||||||.... ++.+.+.++|+..+++|+.++++++++++|.|.+++..++||++||..+..+.+          
T Consensus        85 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------  154 (263)
T 3ak4_A           85 GGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGAP----------  154 (263)
T ss_dssp             TCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCT----------
T ss_pred             CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccCCC----------
Confidence            999999999997654 567889999999999999999999999999998873369999999988765432          


Q ss_pred             hhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCC---
Q 022103          185 DEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG---  261 (302)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~---  261 (302)
                                                      ++..|++||++++.++++++.|++++||+|++|+||+++|++...   
T Consensus       155 --------------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~  202 (263)
T 3ak4_A          155 --------------------------------LLAHYSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREII  202 (263)
T ss_dssp             --------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHHHHHH
T ss_pred             --------------------------------CchhHHHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccChhhhhhcc
Confidence                                            236799999999999999999999999999999999999987321   


Q ss_pred             -----------------------CCCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          262 -----------------------QGSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       262 -----------------------~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                                             ....+|+++|..+++++. ++..+++|+++..+++..
T Consensus       203 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~v~~l~s-~~~~~~tG~~~~vdgG~~  261 (263)
T 3ak4_A          203 WEAELRGMTPEAVRAEYVSLTPLGRIEEPEDVADVVVFLAS-DAARFMTGQGINVTGGVR  261 (263)
T ss_dssp             HHHHHHTSCHHHHHHHHHHTCTTCSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESSSSS
T ss_pred             ccccccccCcHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC-ccccCCCCCEEEECcCEe
Confidence                                   123689999999999987 566789999999998854

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=100.00  E-value=2e-37  Score=278.08  Aligned_cols=228  Identities=21%  Similarity=0.220  Sum_probs=195.5

Q ss_pred             ccccccCcEEEEeCCC--chHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHH
Q 022103           24 TKWWSKETIAIVTGAN--KGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWF  101 (302)
Q Consensus        24 ~~~~~~~k~vlItGas--~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~  101 (302)
                      ...++++|+++||||+  +|||+++|++|+++|++|++++|+.+ .++..+++.+..+.+.++.+|++|+++++++++++
T Consensus         2 ~~~~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~   80 (261)
T 2wyu_A            2 LTVDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAER-LRPEAEKLAEALGGALLFRADVTQDEELDALFAGV   80 (261)
T ss_dssp             EEECCTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGG-GHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHH
T ss_pred             CccCCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHH
Confidence            3456889999999999  99999999999999999999999975 44444555433234788999999999999999999


Q ss_pred             HhhCCCccEEEEcCCCCC-----CCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccC
Q 022103          102 KSNFAALDILVNNAGVSF-----NDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRN  176 (302)
Q Consensus       102 ~~~~g~id~lv~~aG~~~-----~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~  176 (302)
                      .+.++++|+||||||...     .++.+.+.++|++++++|+.++++++++++|.|.+   .++||++||..+..+.+  
T Consensus        81 ~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv~isS~~~~~~~~--  155 (261)
T 2wyu_A           81 KEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE---GGGIVTLTYYASEKVVP--  155 (261)
T ss_dssp             HHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE---EEEEEEEECGGGTSBCT--
T ss_pred             HHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhcc---CCEEEEEecccccCCCC--
Confidence            999999999999999864     35678899999999999999999999999999864   48999999988765432  


Q ss_pred             cccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccC
Q 022103          177 PNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQT  256 (302)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T  256 (302)
                                                              ++..|++||++++.++++++.|++++||+||+|+||+|+|
T Consensus       156 ----------------------------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t  195 (261)
T 2wyu_A          156 ----------------------------------------KYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRT  195 (261)
T ss_dssp             ----------------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCC
T ss_pred             ----------------------------------------CchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcC
Confidence                                                    2367999999999999999999999999999999999999


Q ss_pred             CCCCCC-----------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          257 SMTQGQ-----------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       257 ~~~~~~-----------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                      ++....                 ...+|+++|..+++++. +...+++|+++..++...
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~v~~l~s-~~~~~~tG~~~~vdgG~~  253 (261)
T 2wyu_A          196 VAARSIPGFTKMYDRVAQTAPLRRNITQEEVGNLGLFLLS-PLASGITGEVVYVDAGYH  253 (261)
T ss_dssp             TGGGGCTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGG
T ss_pred             chhhhccccHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcC-hhhcCCCCCEEEECCCcc
Confidence            985432                 13589999999999987 567789999999998854

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=100.00  E-value=9.8e-38  Score=279.49  Aligned_cols=220  Identities=25%  Similarity=0.294  Sum_probs=186.3

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      .++++|+++||||++|||+++|++|+++|++|++++|+.++++           .+.++.+|++|+++++++++++.+.+
T Consensus        17 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-----------~~~~~~~Dl~d~~~v~~~~~~~~~~~   85 (253)
T 2nm0_A           17 RSHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPE-----------GFLAVKCDITDTEQVEQAYKEIEETH   85 (253)
T ss_dssp             ---CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT-----------TSEEEECCTTSHHHHHHHHHHHHHHT
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhc-----------cceEEEecCCCHHHHHHHHHHHHHHc
Confidence            4578999999999999999999999999999999999875432           37889999999999999999999999


Q ss_pred             CCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccc
Q 022103          106 AALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILE  184 (302)
Q Consensus       106 g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~  184 (302)
                      +++|+||||||.... ++.+.+.++|++++++|+.++++++++++|.|.++ +.++||++||..+..+.+          
T Consensus        86 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-~~g~iv~isS~~~~~~~~----------  154 (253)
T 2nm0_A           86 GPVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRA-KKGRVVLISSVVGLLGSA----------  154 (253)
T ss_dssp             CSCSEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHH-TCEEEEEECCCCCCCCHH----------
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCEEEEECchhhCCCCC----------
Confidence            999999999998654 56778999999999999999999999999999876 468999999998865422          


Q ss_pred             hhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC--
Q 022103          185 DEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ--  262 (302)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~--  262 (302)
                                                      ++..|++||++++.|+++++.|++++||+||+|+||+|+|+|....  
T Consensus       155 --------------------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~  202 (253)
T 2nm0_A          155 --------------------------------GQANYAASKAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTKVLTD  202 (253)
T ss_dssp             --------------------------------HHHHHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC--------
T ss_pred             --------------------------------CcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcCH
Confidence                                            1367999999999999999999999999999999999999986532  


Q ss_pred             -------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcccCC
Q 022103          263 -------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVKS  300 (302)
Q Consensus       263 -------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~  300 (302)
                                   ...+|+++|..+++++. ++..+++|+++..+|+....
T Consensus       203 ~~~~~~~~~~p~~~~~~p~dvA~~i~~l~s-~~~~~~tG~~i~vdGG~~~~  252 (253)
T 2nm0_A          203 EQRANIVSQVPLGRYARPEEIAATVRFLAS-DDASYITGAVIPVDGGLGMG  252 (253)
T ss_dssp             -CHHHHHTTCTTCSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTTTCC
T ss_pred             HHHHHHHhcCCCCCCcCHHHHHHHHHHHhC-ccccCCcCcEEEECCccccC
Confidence                         12589999999999987 56778999999999987554

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=100.00  E-value=2.9e-37  Score=279.02  Aligned_cols=225  Identities=18%  Similarity=0.240  Sum_probs=194.7

Q ss_pred             cccCcEEEEeCCC--chHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhh
Q 022103           27 WSKETIAIVTGAN--KGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSN  104 (302)
Q Consensus        27 ~~~~k~vlItGas--~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~  104 (302)
                      .+++|+++||||+  +|||+++|++|+++|++|++++|+.+ .++..+++.+..+.+.++.+|++|+++++++++++.+.
T Consensus         3 ~l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   81 (275)
T 2pd4_A            3 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKD   81 (275)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHH
Confidence            3678999999999  99999999999999999999999986 44455555443234789999999999999999999999


Q ss_pred             CCCccEEEEcCCCCC-----CCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCccc
Q 022103          105 FAALDILVNNAGVSF-----NDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNI  179 (302)
Q Consensus       105 ~g~id~lv~~aG~~~-----~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~  179 (302)
                      ++++|+||||||...     .++.+.+.++|+.++++|+.++++++++++|.|.+   .++||++||..+..+.+     
T Consensus        82 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv~isS~~~~~~~~-----  153 (275)
T 2pd4_A           82 LGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNN---GASVLTLSYLGSTKYMA-----  153 (275)
T ss_dssp             TSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEEECGGGTSBCT-----
T ss_pred             cCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc---CCEEEEEecchhcCCCC-----
Confidence            999999999999864     35668899999999999999999999999999974   48999999988765432     


Q ss_pred             ccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCC
Q 022103          180 KSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMT  259 (302)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~  259 (302)
                                                           ++..|++||++++.++++++.|++++||+||+|+||+|+|+|.
T Consensus       154 -------------------------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~  196 (275)
T 2pd4_A          154 -------------------------------------HYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLAS  196 (275)
T ss_dssp             -------------------------------------TCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTG
T ss_pred             -------------------------------------CchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchh
Confidence                                                 2367999999999999999999999999999999999999986


Q ss_pred             CCC-----------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          260 QGQ-----------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       260 ~~~-----------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                      +..                 ...+|+++|..+++++. +...+++|+++..+++..
T Consensus       197 ~~~~~~~~~~~~~~~~~p~~~~~~p~dva~~~~~l~s-~~~~~~tG~~~~vdgg~~  251 (275)
T 2pd4_A          197 SGIADFRMILKWNEINAPLRKNVSLEEVGNAGMYLLS-SLSSGVSGEVHFVDAGYH  251 (275)
T ss_dssp             GGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGG
T ss_pred             hhccccHHHHHHHHhcCCcCCCCCHHHHHHHHHHHhC-ccccCCCCCEEEECCCcc
Confidence            532                 13589999999999997 566789999999888753

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=100.00  E-value=8.4e-37  Score=270.21  Aligned_cols=227  Identities=21%  Similarity=0.248  Sum_probs=202.8

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcCC-------EEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHH
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELGL-------TVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWF  101 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G~-------~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~  101 (302)
                      ++|+++||||++|||++++++|+++|+       +|++++|+.++++...+++...+.++.++.+|++|+++++++++++
T Consensus         1 ~~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   80 (244)
T 2bd0_A            1 MKHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHI   80 (244)
T ss_dssp             -CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHH
Confidence            368999999999999999999999999       9999999999888888888776778899999999999999999999


Q ss_pred             HhhCCCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccc
Q 022103          102 KSNFAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIK  180 (302)
Q Consensus       102 ~~~~g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~  180 (302)
                      .+.++++|+||||||.... ++.+.+.++|+..+++|+.++++++++++|.|.++ +.++||++||..+..+.+      
T Consensus        81 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~isS~~~~~~~~------  153 (244)
T 2bd0_A           81 VERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQ-HSGHIFFITSVAATKAFR------  153 (244)
T ss_dssp             HHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTSCCT------
T ss_pred             HHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC-CCCEEEEEecchhcCCCC------
Confidence            9999999999999998644 56778999999999999999999999999999876 569999999988765432      


Q ss_pred             cccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCC
Q 022103          181 SILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ  260 (302)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~  260 (302)
                                                          +...|++||++++.++++++.|+.++||+|++|+||+++|+|..
T Consensus       154 ------------------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  197 (244)
T 2bd0_A          154 ------------------------------------HSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWG  197 (244)
T ss_dssp             ------------------------------------TCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTC
T ss_pred             ------------------------------------CCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhh
Confidence                                                23679999999999999999999999999999999999999976


Q ss_pred             CC------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcccC
Q 022103          261 GQ------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVK  299 (302)
Q Consensus       261 ~~------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  299 (302)
                      ..      ...+|+++|..+++++. ++..+++|.++..+++..+
T Consensus       198 ~~~~~~~~~~~~~~dva~~~~~l~~-~~~~~~~g~~~~~~~~~~~  241 (244)
T 2bd0_A          198 KVDDEMQALMMMPEDIAAPVVQAYL-QPSRTVVEEIILRPTSGDI  241 (244)
T ss_dssp             CCCSTTGGGSBCHHHHHHHHHHHHT-SCTTEEEEEEEEEETTCCC
T ss_pred             hccccccccCCCHHHHHHHHHHHHh-CCccccchheEEecccccc
Confidence            53      24689999999999997 6777799999998887655

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=100.00  E-value=1.2e-36  Score=271.48  Aligned_cols=233  Identities=26%  Similarity=0.304  Sum_probs=204.4

Q ss_pred             cccccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHH
Q 022103           23 STKWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFK  102 (302)
Q Consensus        23 ~~~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~  102 (302)
                      +..+++++|+++||||+||||++++++|+++|++|++++|+.++++...+++.+.+.++.++.+|++|.++++++++++.
T Consensus         6 ~~~~~l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~   85 (260)
T 3awd_A            6 MEKLRLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVH   85 (260)
T ss_dssp             TGGGCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccccCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHH
Confidence            33467889999999999999999999999999999999999988888888887777789999999999999999999999


Q ss_pred             hhCCCccEEEEcCCCCC-C-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccc
Q 022103          103 SNFAALDILVNNAGVSF-N-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIK  180 (302)
Q Consensus       103 ~~~g~id~lv~~aG~~~-~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~  180 (302)
                      +.++++|+||||||... . ++.+.+.++|++.+++|+.+++++++++++.|.++ +.++||++||..+..+.+..    
T Consensus        86 ~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~~sS~~~~~~~~~~----  160 (260)
T 3awd_A           86 EQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQ-KQGVIVAIGSMSGLIVNRPQ----  160 (260)
T ss_dssp             HHHSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTSCCSSS----
T ss_pred             HHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhc-CCCEEEEEecchhcccCCCC----
Confidence            99999999999999765 3 56788999999999999999999999999999876 47899999998876543221    


Q ss_pred             cccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCC
Q 022103          181 SILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ  260 (302)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~  260 (302)
                                                          ....|++||++++.++++++.|++++||+|++|+||+++|++..
T Consensus       161 ------------------------------------~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~  204 (260)
T 3awd_A          161 ------------------------------------QQAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTR  204 (260)
T ss_dssp             ------------------------------------CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTH
T ss_pred             ------------------------------------CccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhh
Confidence                                                12679999999999999999999989999999999999999865


Q ss_pred             -CC----------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          261 -GQ----------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       261 -~~----------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                       ..                ...+|+++|..+++++. +...+++|++|..+++.
T Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~-~~~~~~~G~~~~v~gg~  257 (260)
T 3awd_A          205 FGMEKPELYDAWIAGTPMGRVGQPDEVASVVQFLAS-DAASLMTGAIVNVDAGF  257 (260)
T ss_dssp             HHHTCHHHHHHHHHTCTTSSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTT
T ss_pred             cccCChHHHHHHHhcCCcCCCCCHHHHHHHHHHHhC-chhccCCCcEEEECCce
Confidence             11                23689999999999986 45667899999998874

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=100.00  E-value=2.5e-37  Score=274.78  Aligned_cols=226  Identities=23%  Similarity=0.263  Sum_probs=182.6

Q ss_pred             ccccccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHH
Q 022103           22 SSTKWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWF  101 (302)
Q Consensus        22 ~~~~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~  101 (302)
                      +......++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.   .++.++.+|+++.++++++++++
T Consensus         6 ~~~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~   82 (249)
T 3f9i_A            6 HHHMIDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALK---DNYTIEVCNLANKEECSNLISKT   82 (249)
T ss_dssp             ---CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC---SSEEEEECCTTSHHHHHHHHHTC
T ss_pred             ccccccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhc---cCccEEEcCCCCHHHHHHHHHhc
Confidence            344567899999999999999999999999999999999999999888887774   37889999999999998887644


Q ss_pred             HhhCCCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccc
Q 022103          102 KSNFAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIK  180 (302)
Q Consensus       102 ~~~~g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~  180 (302)
                          +++|+||||||.... .+.+.+.++|++++++|+.++++++++++|.|.++ +.++||++||..+..+.+      
T Consensus        83 ----~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~~~~------  151 (249)
T 3f9i_A           83 ----SNLDILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQK-RYGRIINISSIVGIAGNP------  151 (249)
T ss_dssp             ----SCCSEEEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCCCC--CCS------
T ss_pred             ----CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCcEEEEEccHHhccCCC------
Confidence                789999999998754 46678889999999999999999999999999876 578999999998875532      


Q ss_pred             cccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCC
Q 022103          181 SILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ  260 (302)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~  260 (302)
                                                          ++..|++||+|++.|+++++.|++++||+|++|+||+|+|+|..
T Consensus       152 ------------------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~  195 (249)
T 3f9i_A          152 ------------------------------------GQANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTD  195 (249)
T ss_dssp             ------------------------------------CSHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC-----
T ss_pred             ------------------------------------CCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCccccCccc
Confidence                                                24789999999999999999999999999999999999999976


Q ss_pred             CCC---------------CCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          261 GQG---------------SHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       261 ~~~---------------~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                      ...               ...|+++|..+++|+. +...+++|+++..+++..
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s-~~~~~~tG~~~~vdgG~~  247 (249)
T 3f9i_A          196 KLNEKQREAIVQKIPLGTYGIPEDVAYAVAFLAS-NNASYITGQTLHVNGGML  247 (249)
T ss_dssp             -CCHHHHHHHHHHCTTCSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTSS
T ss_pred             ccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcC-CccCCccCcEEEECCCEe
Confidence            542               2569999999999987 567789999999999864

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=100.00  E-value=4.2e-37  Score=275.31  Aligned_cols=224  Identities=23%  Similarity=0.244  Sum_probs=194.5

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHH---cCCEEEEEecChhhHHHHHHHHhhC--CCceeEEEeeCCCHHHHHHHHHH
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAE---LGLTVILTARDVERGQRAVESLSEK--GLPVNFFQLDVSDPSSIEAFVSW  100 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~---~G~~V~l~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dlt~~~~~~~~~~~  100 (302)
                      .++++|+++||||++|||+++|++|++   +|++|++++|+.+++++..+++.+.  +.++.++.+|++|++++++++++
T Consensus         2 ~~l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   81 (259)
T 1oaa_A            2 DGLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSA   81 (259)
T ss_dssp             CCCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHH
Confidence            457899999999999999999999999   8999999999999998888888654  55789999999999999999999


Q ss_pred             HHh--hCCCcc--EEEEcCCCCC---CCCCC-CCHHHHHHHHHhhhhHHHHHHHHHhhhhhcC-CCCCcEEEecCCCccc
Q 022103          101 FKS--NFAALD--ILVNNAGVSF---NDIYK-NTVEHAETVIRTNFYGAKLLTESLLPLFRRS-PSKSRILNISSRLGTL  171 (302)
Q Consensus       101 ~~~--~~g~id--~lv~~aG~~~---~~~~~-~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~-~~~~~iv~vsS~~~~~  171 (302)
                      +.+  .++++|  +||||||...   .++.+ .+.++|++++++|+.++++++++++|.|.++ ...++||++||..+..
T Consensus        82 ~~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~~  161 (259)
T 1oaa_A           82 VRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQ  161 (259)
T ss_dssp             HHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTS
T ss_pred             HHhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhcC
Confidence            988  678899  9999999753   24666 6899999999999999999999999999765 1358999999998875


Q ss_pred             ccccCcccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeec
Q 022103          172 SKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCP  251 (302)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~P  251 (302)
                      +.+                                          ++..|++||+|+++|+++|+.|+++  |+||+|+|
T Consensus       162 ~~~------------------------------------------~~~~Y~asKaa~~~~~~~la~e~~~--i~vn~v~P  197 (259)
T 1oaa_A          162 PYK------------------------------------------GWGLYCAGKAARDMLYQVLAAEEPS--VRVLSYAP  197 (259)
T ss_dssp             CCT------------------------------------------TCHHHHHHHHHHHHHHHHHHHHCTT--EEEEEEEC
T ss_pred             CCC------------------------------------------CccHHHHHHHHHHHHHHHHHhhCCC--ceEEEecC
Confidence            432                                          2478999999999999999999863  99999999


Q ss_pred             CcccCCCCCC--------------------CCCCCHHHHHHHHHHHhhcCCCCCCCcceeecCC
Q 022103          252 GFTQTSMTQG--------------------QGSHTADEAADVGARLLLLHPQQLPTAKFYIGLD  295 (302)
Q Consensus       252 G~v~T~~~~~--------------------~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~  295 (302)
                      |+++|+|...                    .+..+|+++|..+++++. + ..+++|+++.++|
T Consensus       198 G~v~T~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~~-~-~~~itG~~i~vdg  259 (259)
T 1oaa_A          198 GPLDNDMQQLARETSKDPELRSKLQKLKSDGALVDCGTSAQKLLGLLQ-K-DTFQSGAHVDFYD  259 (259)
T ss_dssp             CSBSSHHHHHHHHHCSCHHHHHHHHHHHHTTCSBCHHHHHHHHHHHHH-H-CCSCTTEEEETTC
T ss_pred             CCcCcchHHHHhhccCChhHHHHHHHhhhcCCcCCHHHHHHHHHHHHh-h-ccccCCcEEeccC
Confidence            9999998542                    124689999999999997 3 5779999998775

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=100.00  E-value=2.1e-36  Score=272.36  Aligned_cols=230  Identities=21%  Similarity=0.250  Sum_probs=200.9

Q ss_pred             cccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhh
Q 022103           25 KWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSN  104 (302)
Q Consensus        25 ~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~  104 (302)
                      ...+++|+++||||++|||+++|++|+++|++|++++|+.++.+...+++... .++.++.+|++|+++++++++++.+.
T Consensus        11 ~~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~   89 (278)
T 2bgk_A           11 TNRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSP-DVISFVHCDVTKDEDVRNLVDTTIAK   89 (278)
T ss_dssp             CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCT-TTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCC-CceEEEECCCCCHHHHHHHHHHHHHH
Confidence            45688999999999999999999999999999999999988877777777433 37899999999999999999999999


Q ss_pred             CCCccEEEEcCCCCC---CCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCccccc
Q 022103          105 FAALDILVNNAGVSF---NDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKS  181 (302)
Q Consensus       105 ~g~id~lv~~aG~~~---~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~  181 (302)
                      ++++|+||||||...   .++.+.+.++|++.+++|+.+++++++++++.|.++ +.++||++||..+..+.+       
T Consensus        90 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~isS~~~~~~~~-------  161 (278)
T 2bgk_A           90 HGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPA-KKGSIVFTASISSFTAGE-------  161 (278)
T ss_dssp             HSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGG-TCEEEEEECCGGGTCCCT-------
T ss_pred             cCCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhc-CCCeEEEEeeccccCCCC-------
Confidence            999999999999763   256788999999999999999999999999999876 578999999988764432       


Q ss_pred             ccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCC
Q 022103          182 ILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG  261 (302)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~  261 (302)
                                                        .++..|++||++++.++++++.|++++||+|++|+||.++|++...
T Consensus       162 ----------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  207 (278)
T 2bgk_A          162 ----------------------------------GVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTD  207 (278)
T ss_dssp             ----------------------------------TSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTT
T ss_pred             ----------------------------------CCCcchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhh
Confidence                                              1246799999999999999999999899999999999999998654


Q ss_pred             C--------------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          262 Q--------------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       262 ~--------------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                      .                    ...+|+++|..+++++. ++..+++|++|..+++..
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~-~~~~~~~G~~~~v~gg~~  263 (278)
T 2bgk_A          208 VFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYLAG-DESKYVSGLNLVIDGGYT  263 (278)
T ss_dssp             SSSCCHHHHHHHHHHTCSSCSCCCCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGG
T ss_pred             hcccchhHHHHhhhcccccccccCCHHHHHHHHHHHcC-cccccCCCCEEEECCccc
Confidence            2                    13689999999999986 456678999999998754

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=100.00  E-value=8.2e-37  Score=282.37  Aligned_cols=213  Identities=21%  Similarity=0.258  Sum_probs=185.7

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCC--ceeEEEeeCCCHHHHHHHHHHHHh
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGL--PVNFFQLDVSDPSSIEAFVSWFKS  103 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~--~~~~~~~Dlt~~~~~~~~~~~~~~  103 (302)
                      .++++|+||||||+||||+++|++|+++|++|++++|+.+++++..+++...+.  ++.++.+|++|.++++++++++.+
T Consensus         4 ~~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   83 (319)
T 3ioy_A            4 KDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEA   83 (319)
T ss_dssp             CCCTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            457899999999999999999999999999999999999999999988876655  789999999999999999999999


Q ss_pred             hCCCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcC-----CCCCcEEEecCCCcccccccCc
Q 022103          104 NFAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRS-----PSKSRILNISSRLGTLSKVRNP  177 (302)
Q Consensus       104 ~~g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~-----~~~~~iv~vsS~~~~~~~~~~~  177 (302)
                      .++++|+||||||+... ++.+.+.++|++++++|+.|+++++++++|.|.++     ...++||++||..+..+.+   
T Consensus        84 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~~---  160 (319)
T 3ioy_A           84 RFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAG---  160 (319)
T ss_dssp             HTCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCCS---
T ss_pred             hCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCCC---
Confidence            99999999999998654 67888999999999999999999999999999763     2468999999999876533   


Q ss_pred             ccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCC
Q 022103          178 NIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTS  257 (302)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~  257 (302)
                                                             ++.+|++||+|+++|+++|+.|+.+.||+|++|+||+|+|+
T Consensus       161 ---------------------------------------~~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~  201 (319)
T 3ioy_A          161 ---------------------------------------SPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSY  201 (319)
T ss_dssp             ---------------------------------------SSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC--
T ss_pred             ---------------------------------------CCHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccC
Confidence                                                   24789999999999999999999999999999999999999


Q ss_pred             CCCCCC---------------------------CCCHHHHHHHHHHHhhc
Q 022103          258 MTQGQG---------------------------SHTADEAADVGARLLLL  280 (302)
Q Consensus       258 ~~~~~~---------------------------~~~~~~~a~~~~~l~~~  280 (302)
                      |.....                           ..+|+++|..++..+..
T Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~vA~~~~~al~~  251 (319)
T 3ioy_A          202 IYASDDIRPDALKGEVKPVDKTAVERLAGVHEFGMEPDVIGARVIEAMKA  251 (319)
T ss_dssp             ---------------------------CCGGGSSBCHHHHHHHHHHHHHT
T ss_pred             cccccccCchhhcccccchhHHHHHHHHHhhhcCCCHHHHHHHHHHHHHc
Confidence            875321                           15899999999998873

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=100.00  E-value=4.9e-37  Score=275.90  Aligned_cols=224  Identities=17%  Similarity=0.165  Sum_probs=193.1

Q ss_pred             ccCcEEEEeCCC--chHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           28 SKETIAIVTGAN--KGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        28 ~~~k~vlItGas--~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      +++|+++||||+  +|||+++|++|+++|++|++++|+. +.++..+++.+..+...++.+|++|+++++++++++.+++
T Consensus         7 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   85 (265)
T 1qsg_A            7 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVW   85 (265)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST-TTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTC
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHc
Confidence            789999999999  9999999999999999999999987 4445555554432345789999999999999999999999


Q ss_pred             CCccEEEEcCCCCC-----CCCCC-CCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCccc
Q 022103          106 AALDILVNNAGVSF-----NDIYK-NTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNI  179 (302)
Q Consensus       106 g~id~lv~~aG~~~-----~~~~~-~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~  179 (302)
                      +++|+||||||...     .++.+ .+.++|++++++|+.++++++++++|.|.+   .++||++||..+..+.+     
T Consensus        86 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv~isS~~~~~~~~-----  157 (265)
T 1qsg_A           86 PKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP---GSALLTLSYLGAERAIP-----  157 (265)
T ss_dssp             SSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEEECGGGTSBCT-----
T ss_pred             CCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc---CCEEEEEcchhhccCCC-----
Confidence            99999999999864     24556 889999999999999999999999999964   48999999988765432     


Q ss_pred             ccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCC
Q 022103          180 KSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMT  259 (302)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~  259 (302)
                                                           ++..|++||++++.++++++.|++++||+||+|+||+|+|++.
T Consensus       158 -------------------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~  200 (265)
T 1qsg_A          158 -------------------------------------NYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAA  200 (265)
T ss_dssp             -------------------------------------TTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTG
T ss_pred             -------------------------------------CchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchh
Confidence                                                 2367999999999999999999999999999999999999986


Q ss_pred             CCC-----------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          260 QGQ-----------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       260 ~~~-----------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                      ...                 ...+|+++|..+++++. +...+++|+++..++...
T Consensus       201 ~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~v~~l~s-~~~~~~tG~~~~vdgG~~  255 (265)
T 1qsg_A          201 SGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCS-DLSAGISGEVVHVDGGFS  255 (265)
T ss_dssp             GGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHTS-GGGTTCCSCEEEESTTGG
T ss_pred             hcccccHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhC-chhcCccCCEEEECCCcC
Confidence            432                 13689999999999987 567789999999998854

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=100.00  E-value=8.8e-37  Score=272.28  Aligned_cols=217  Identities=26%  Similarity=0.355  Sum_probs=186.2

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCccE
Q 022103           31 TIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDI  110 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id~  110 (302)
                      |+++||||++|||+++|++|+++|++|++++|+.+++++..+++.   .++.++.+|++|+++++++++++.+.++++|+
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~   77 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELG---DNLYIAQLDVRNRAAIEEMLASLPAEWCNIDI   77 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC---TTEEEEECCTTCHHHHHHHHHTSCTTTCCCCE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc---CceEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence            689999999999999999999999999999999988888777764   47889999999999999999999999999999


Q ss_pred             EEEcCCCCC--CCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhh
Q 022103          111 LVNNAGVSF--NDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEEL  188 (302)
Q Consensus       111 lv~~aG~~~--~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  188 (302)
                      ||||||...  .++.+.+.++|+.++++|+.++++++++++|.|.++ +.++||++||..+..+.+              
T Consensus        78 lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-~~g~iv~isS~~~~~~~~--------------  142 (248)
T 3asu_A           78 LVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVER-NHGHIINIGSTAGSWPYA--------------  142 (248)
T ss_dssp             EEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEEEECCGGGTSCCT--------------
T ss_pred             EEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCceEEEEccchhccCCC--------------
Confidence            999999863  357788999999999999999999999999999876 469999999988865432              


Q ss_pred             cHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCccc-CCCCCCC-----
Q 022103          189 SEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQ-TSMTQGQ-----  262 (302)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~-T~~~~~~-----  262 (302)
                                                  ++..|++||+++++|+++|+.|++++||+||+|+||+|+ |+|....     
T Consensus       143 ----------------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~gT~~~~~~~~~~~  194 (248)
T 3asu_A          143 ----------------------------GGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDD  194 (248)
T ss_dssp             ----------------------------TCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECSBCC------------
T ss_pred             ----------------------------CCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeccccccCcchhhcccCch
Confidence                                        247899999999999999999999999999999999999 9985321     


Q ss_pred             ----------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCC
Q 022103          263 ----------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLD  295 (302)
Q Consensus       263 ----------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~  295 (302)
                                ...+|+++|..+++++. + ...++|..+....
T Consensus       195 ~~~~~~~~~~~~~~p~dvA~~v~~l~s-~-~~~~~g~~i~v~~  235 (248)
T 3asu_A          195 GKAEKTYQNTVALTPEDVSEAVWWVST-L-PAHVNINTLEMMP  235 (248)
T ss_dssp             ----------CCBCHHHHHHHHHHHHH-S-CTTCCCCEEEECC
T ss_pred             HHHHHHHhccCCCCHHHHHHHHHHHhc-C-CccceeeEEEEcc
Confidence                      12579999999999997 3 4567888776544

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=100.00  E-value=1.7e-37  Score=276.55  Aligned_cols=221  Identities=24%  Similarity=0.268  Sum_probs=187.6

Q ss_pred             cccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhh
Q 022103           25 KWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSN  104 (302)
Q Consensus        25 ~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~  104 (302)
                      ..++++|+++||||++|||++++++|+++|++|++++|+.++++           .+..+.+|++|+++++++++++.+.
T Consensus        10 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-----------~~~~~~~D~~~~~~~~~~~~~~~~~   78 (247)
T 1uzm_A           10 KPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPK-----------GLFGVEVDVTDSDAVDRAFTAVEEH   78 (247)
T ss_dssp             CCCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT-----------TSEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHH-----------HhcCeeccCCCHHHHHHHHHHHHHH
Confidence            35578999999999999999999999999999999999875432           2224889999999999999999999


Q ss_pred             CCCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCccccccc
Q 022103          105 FAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSIL  183 (302)
Q Consensus       105 ~g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~  183 (302)
                      ++++|+||||||.... ++.+.+.++|++++++|+.++++++++++|.|+++ +.++||++||..+..+.+         
T Consensus        79 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~~~~---------  148 (247)
T 1uzm_A           79 QGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRN-KFGRMIFIGSVSGLWGIG---------  148 (247)
T ss_dssp             HSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEEECCCCC--------------
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCCEEEEECCHhhccCCC---------
Confidence            9999999999998754 56788999999999999999999999999999876 579999999998875432         


Q ss_pred             chhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC-
Q 022103          184 EDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ-  262 (302)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~-  262 (302)
                                                       ++..|++||++++.++++++.|++++||+||+|+||+++|+|.... 
T Consensus       149 ---------------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~  195 (247)
T 1uzm_A          149 ---------------------------------NQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALD  195 (247)
T ss_dssp             ---------------------------------CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHSC
T ss_pred             ---------------------------------CChhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchhhcC
Confidence                                             2367999999999999999999999999999999999999874321 


Q ss_pred             --------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcccCC
Q 022103          263 --------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVKS  300 (302)
Q Consensus       263 --------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~  300 (302)
                                    ...+|+++|..+++++. +...+++|+++..+|+....
T Consensus       196 ~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s-~~~~~~~G~~i~vdgG~~~~  246 (247)
T 1uzm_A          196 ERIQQGALQFIPAKRVGTPAEVAGVVSFLAS-EDASYISGAVIPVDGGMGMG  246 (247)
T ss_dssp             HHHHHHHGGGCTTCSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTTTC-
T ss_pred             HHHHHHHHhcCCCCCCcCHHHHHHHHHHHcC-ccccCCcCCEEEECCCcccC
Confidence                          23689999999999987 56778999999999986543

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=100.00  E-value=8.6e-37  Score=272.23  Aligned_cols=220  Identities=23%  Similarity=0.222  Sum_probs=186.2

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+.        .+.  .+.++.+|++|+++++++++++.+++
T Consensus         3 m~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~--------~~~--~~~~~~~D~~d~~~~~~~~~~~~~~~   72 (250)
T 2fwm_X            3 MDFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ--------EQY--PFATEVMDVADAAQVAQVCQRLLAET   72 (250)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS--------SCC--SSEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh--------hcC--CceEEEcCCCCHHHHHHHHHHHHHHc
Confidence            35789999999999999999999999999999999998752        111  27889999999999999999999999


Q ss_pred             CCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccc
Q 022103          106 AALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILE  184 (302)
Q Consensus       106 g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~  184 (302)
                      +++|+||||||.... ++.+.+.++|++++++|+.++++++++++|.|+++ +.++||++||..+..+.+          
T Consensus        73 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~-~~g~iv~isS~~~~~~~~----------  141 (250)
T 2fwm_X           73 ERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQ-RGGAIVTVASDAAHTPRI----------  141 (250)
T ss_dssp             SCCCEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEEEECCGGGTSCCT----------
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhc-CCCEEEEECchhhCCCCC----------
Confidence            999999999998654 57788999999999999999999999999999876 579999999988865432          


Q ss_pred             hhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC--
Q 022103          185 DEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ--  262 (302)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~--  262 (302)
                                                      ++..|++||++++.++++++.|++++||+||+|+||+++|+|....  
T Consensus       142 --------------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~  189 (250)
T 2fwm_X          142 --------------------------------GMSAYGASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWV  189 (250)
T ss_dssp             --------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------
T ss_pred             --------------------------------CCchHHHHHHHHHHHHHHHHHHhCccCCEEEEEECCcccCcccccccc
Confidence                                            2478999999999999999999999999999999999999985321  


Q ss_pred             -----------------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcccC
Q 022103          263 -----------------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVK  299 (302)
Q Consensus       263 -----------------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  299 (302)
                                             ...+|+++|..+++|+. ++..+++|+++..+|+...
T Consensus       190 ~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s-~~~~~~tG~~i~vdGG~~~  248 (250)
T 2fwm_X          190 SDDAEEQRIRGFGEQFKLGIPLGKIARPQEIANTILFLAS-DLASHITLQDIVVDGGSTL  248 (250)
T ss_dssp             --------------------------CHHHHHHHHHHHHS-GGGTTCCSCEEEESTTTTT
T ss_pred             ChhHHHHHHhhhhhcccccCCCCCCcCHHHHHHHHHHHhC-ccccCCCCCEEEECCCccc
Confidence                                   02468999999999987 5667899999999998643

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=2.6e-37  Score=279.01  Aligned_cols=223  Identities=24%  Similarity=0.307  Sum_probs=195.3

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      .++++|+++||||++|||+++|++|+++|++|++++|+.++++...+++.    .+.++.+|++|+++++++++++.+++
T Consensus         5 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~Dv~d~~~v~~~~~~~~~~~   80 (270)
T 1yde_A            5 TRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELP----GAVFILCDVTQEDDVKTLVSETIRRF   80 (270)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCT----TEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc----CCeEEEcCCCCHHHHHHHHHHHHHHc
Confidence            35789999999999999999999999999999999999988777766553    47889999999999999999999999


Q ss_pred             CCccEEEEcCCCCC--CCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCccccccc
Q 022103          106 AALDILVNNAGVSF--NDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSIL  183 (302)
Q Consensus       106 g~id~lv~~aG~~~--~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~  183 (302)
                      +++|+||||||...  .++.+.+.++|++++++|+.++++++++++|.|.++  .++||++||..+..+.+         
T Consensus        81 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--~g~iv~isS~~~~~~~~---------  149 (270)
T 1yde_A           81 GRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS--QGNVINISSLVGAIGQA---------  149 (270)
T ss_dssp             SCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEECCHHHHHCCT---------
T ss_pred             CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC--CCEEEEEcCccccCCCC---------
Confidence            99999999999864  356788999999999999999999999999999765  58999999987765432         


Q ss_pred             chhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCC--
Q 022103          184 EDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG--  261 (302)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~--  261 (302)
                                                       .+..|++||++++.++++++.|++++||+||+|+||+++|+|...  
T Consensus       150 ---------------------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~  196 (270)
T 1yde_A          150 ---------------------------------QAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELA  196 (270)
T ss_dssp             ---------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHH
T ss_pred             ---------------------------------CCcccHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCccccchhhhhh
Confidence                                             236799999999999999999999999999999999999986321  


Q ss_pred             ------------------C-CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          262 ------------------Q-GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       262 ------------------~-~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                                        . +..+|+++|..+++|++ + ..+++|+.+..+|+..
T Consensus       197 ~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~s-~-~~~itG~~i~vdGG~~  250 (270)
T 1yde_A          197 ALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVFLAS-E-ANFCTGIELLVTGGAE  250 (270)
T ss_dssp             TTSSSHHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHH-H-CTTCCSCEEEESTTTT
T ss_pred             hcccchHHHHHHHhhcCCCCCCcCHHHHHHHHHHHcc-c-CCCcCCCEEEECCCee
Confidence                              0 12579999999999997 3 5789999999998854

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=100.00  E-value=3.1e-37  Score=271.48  Aligned_cols=219  Identities=18%  Similarity=0.204  Sum_probs=182.9

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCccE
Q 022103           31 TIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDI  110 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id~  110 (302)
                      |++|||||++|||+++|++|+++|++|++++|+.+++++..+++   +.++.++.+|+++.++++++++++.+.   +|+
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~---~d~   75 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCL---SNNVGYRARDLASHQEVEQLFEQLDSI---PST   75 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTC---SSCCCEEECCTTCHHHHHHHHHSCSSC---CSE
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH---hhccCeEeecCCCHHHHHHHHHHHhhc---CCE
Confidence            68999999999999999999999999999999998888777766   457889999999999999999877654   399


Q ss_pred             EEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhhc
Q 022103          111 LVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELS  189 (302)
Q Consensus       111 lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~  189 (302)
                      ||||||.... ++.+.+.++|++++++|+.++++++++++|.|.++  .++||++||..+..+.+               
T Consensus        76 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--~~~iv~isS~~~~~~~~---------------  138 (230)
T 3guy_A           76 VVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQ--PVNVVMIMSTAAQQPKA---------------  138 (230)
T ss_dssp             EEECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTS--CCEEEEECCGGGTSCCT---------------
T ss_pred             EEEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--CCeEEEEeecccCCCCC---------------
Confidence            9999998754 57789999999999999999999999999999876  35999999988875532               


Q ss_pred             HHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCCC------
Q 022103          190 EEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQG------  263 (302)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~~------  263 (302)
                                                 ++..|++||+|++.|+++|+.|++++||+||+|+||+|+|+|.+...      
T Consensus       139 ---------------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~  191 (230)
T 3guy_A          139 ---------------------------QESTYCAVKWAVKGLIESVRLELKGKPMKIIAVYPGGMATEFWETSGKSLDTS  191 (230)
T ss_dssp             ---------------------------TCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEECCC---------------
T ss_pred             ---------------------------CCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEECCcccChHHHhcCCCCCcc
Confidence                                       24789999999999999999999999999999999999999977542      


Q ss_pred             -CCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcccC
Q 022103          264 -SHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVK  299 (302)
Q Consensus       264 -~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  299 (302)
                       ..+|+++|..+++++..+...+++|..+..+....+
T Consensus       192 ~~~~~~dvA~~i~~l~~~~~~~~itg~~~~~~~~~~~  228 (230)
T 3guy_A          192 SFMSAEDAALMIHGALANIGNGYVSDITVNREGHHHH  228 (230)
T ss_dssp             -CCCHHHHHHHHHHHCCEETTEEEEEEEEEC------
T ss_pred             cCCCHHHHHHHHHHHHhCcCCCCccceeecCCCCCCC
Confidence             378999999999999878889999999988876544

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=100.00  E-value=1.3e-36  Score=272.50  Aligned_cols=229  Identities=27%  Similarity=0.305  Sum_probs=189.8

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      +++++|+++||||++|||+++++.|+++|++|++++|+.+++++..+++.+.+.++.++.+|+++.++++++++++.+.+
T Consensus        10 ~~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   89 (266)
T 1xq1_A           10 WSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMF   89 (266)
T ss_dssp             TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHh
Confidence            56889999999999999999999999999999999999998888888887777788999999999999999999999988


Q ss_pred             -CCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCccccccc
Q 022103          106 -AALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSIL  183 (302)
Q Consensus       106 -g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~  183 (302)
                       +++|+||||||.... ++.+.+.++|++.+++|+.++++++++++|.|.++ +.++||++||..+..+.+         
T Consensus        90 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-~~~~iv~isS~~~~~~~~---------  159 (266)
T 1xq1_A           90 GGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKAS-GCGNIIFMSSIAGVVSAS---------  159 (266)
T ss_dssp             TTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-SSCEEEEEC------------------
T ss_pred             CCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEEccchhccCCC---------
Confidence             899999999997644 56778999999999999999999999999999876 568999999988764422         


Q ss_pred             chhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC-
Q 022103          184 EDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ-  262 (302)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~-  262 (302)
                                                       .+..|++||++++.++++++.+++++||+|++|+||+++|++.... 
T Consensus       160 ---------------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~  206 (266)
T 1xq1_A          160 ---------------------------------VGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVY  206 (266)
T ss_dssp             ----------------------------------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC--------
T ss_pred             ---------------------------------CCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhhc
Confidence                                             2367999999999999999999998999999999999999985532 


Q ss_pred             ---------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          263 ---------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       263 ---------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                                     ...+|+++|..+++++. +...+++|+++..+++..
T Consensus       207 ~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~-~~~~~~~G~~~~v~gG~~  256 (266)
T 1xq1_A          207 DDEFKKVVISRKPLGRFGEPEEVSSLVAFLCM-PAASYITGQTICVDGGLT  256 (266)
T ss_dssp             -----------------CCGGGGHHHHHHHTS-GGGTTCCSCEEECCCCEE
T ss_pred             CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcC-ccccCccCcEEEEcCCcc
Confidence                           12578999999999986 566778999999998854

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=100.00  E-value=1.9e-36  Score=270.50  Aligned_cols=229  Identities=24%  Similarity=0.293  Sum_probs=201.7

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEec-ChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTAR-DVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r-~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      ++++|+++||||++|||++++++|+++|++|++++| +.+++++..+++.+.+.++.++.+|++|+++++++++++.+.+
T Consensus         4 ~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (261)
T 1gee_A            4 DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEF   83 (261)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            478999999999999999999999999999999999 8888888888887767788999999999999999999999999


Q ss_pred             CCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccc
Q 022103          106 AALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILE  184 (302)
Q Consensus       106 g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~  184 (302)
                      +++|+||||||.... ++.+.+.++|++.+++|+.+++++++++++.|.+++..++||++||..+..+.           
T Consensus        84 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~-----------  152 (261)
T 1gee_A           84 GKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPW-----------  152 (261)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCC-----------
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCCC-----------
Confidence            999999999998654 56778999999999999999999999999999887336899999998776442           


Q ss_pred             hhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC--
Q 022103          185 DEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ--  262 (302)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~--  262 (302)
                                                     +++..|++||++++.++++++.+++++||+|++|+||+++|++....  
T Consensus       153 -------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~  201 (261)
T 1gee_A          153 -------------------------------PLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFA  201 (261)
T ss_dssp             -------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHH
T ss_pred             -------------------------------CCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhhccc
Confidence                                           22478999999999999999999998999999999999999975321  


Q ss_pred             ---------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          263 ---------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       263 ---------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                                     ...+|+++|..+++++. +...+++|+++..+++..
T Consensus       202 ~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~-~~~~~~~G~~~~v~gg~~  251 (261)
T 1gee_A          202 DPEQRADVESMIPMGYIGEPEEIAAVAAWLAS-SEASYVTGITLFADGGMT  251 (261)
T ss_dssp             SHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGG
T ss_pred             ChhHHHHHHhcCCCCCCcCHHHHHHHHHHHhC-ccccCCCCcEEEEcCCcc
Confidence                           23589999999999986 556778999999998754

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=100.00  E-value=2.1e-36  Score=270.85  Aligned_cols=265  Identities=33%  Similarity=0.610  Sum_probs=211.7

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHH-cCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAE-LGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~-~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      +++|+++||||+||||+++++.|++ +|++|++++|+.++.++..+++...+.++.++.+|++|.++++++++++.+.++
T Consensus         2 ~~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   81 (276)
T 1wma_A            2 SGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYG   81 (276)
T ss_dssp             CCCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            4689999999999999999999999 899999999999988888888877777889999999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCCC-HHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCccccccc-Ccccccccc
Q 022103          107 ALDILVNNAGVSFNDIYKNT-VEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVR-NPNIKSILE  184 (302)
Q Consensus       107 ~id~lv~~aG~~~~~~~~~~-~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~-~~~~~~~~~  184 (302)
                      ++|+||||||.........+ .++++.++++|+.+++++++++++.|.+   .++||++||..+..+... .+.......
T Consensus        82 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv~~sS~~~~~~~~~~~~~~~~~~~  158 (276)
T 1wma_A           82 GLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKP---QGRVVNVSSIMSVRALKSCSPELQQKFR  158 (276)
T ss_dssp             SEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEECCHHHHHHHHTSCHHHHHHHH
T ss_pred             CCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCC---CCEEEEECChhhhcccccCChhHHhhcc
Confidence            99999999998754333344 5899999999999999999999999865   379999999887643211 000000111


Q ss_pred             hhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccC----CCcEEEEeecCcccCCCCC
Q 022103          185 DEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEG----EGISVNSYCPGFTQTSMTQ  260 (302)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~----~gI~V~~v~PG~v~T~~~~  260 (302)
                      ...+.+..+......|......+.+.....|.  ..|++||++++.+++.++.++++    .||+|++|+||+|.|+|..
T Consensus       159 ~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~--~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~~~  236 (276)
T 1wma_A          159 SETITEEELVGLMNKFVEDTKKGVHQKEGWPS--SAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAG  236 (276)
T ss_dssp             CSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCS--CHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTC
T ss_pred             ccccchhhhhhhhhhhhhhhcccccccCCCcc--chhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCcCC
Confidence            12334444444555555555555444333333  78999999999999999999977    7999999999999999988


Q ss_pred             CCCCCCHHHHHHHHHHHhhcCC-CCCCCcceeecCCcc
Q 022103          261 GQGSHTADEAADVGARLLLLHP-QQLPTAKFYIGLDPF  297 (302)
Q Consensus       261 ~~~~~~~~~~a~~~~~l~~~~~-~~~~~G~~~~~~~~~  297 (302)
                      .....+|+++|..+++++..+. ...++|++|...++.
T Consensus       237 ~~~~~~~~~~a~~~~~l~~~~~~~~~~~G~~~~~~~~~  274 (276)
T 1wma_A          237 PKATKSPEEGAETPVYLALLPPDAEGPHGQFVSEKRVE  274 (276)
T ss_dssp             TTCSBCHHHHTHHHHHHHSCCTTCCCCCSCEEETTEEE
T ss_pred             ccccCChhHhhhhHhhhhcCcccccccCceEeccCcee
Confidence            7677899999999999997443 358999999855443

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=100.00  E-value=2.2e-36  Score=274.58  Aligned_cols=229  Identities=27%  Similarity=0.353  Sum_probs=200.4

Q ss_pred             cccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhh
Q 022103           25 KWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSN  104 (302)
Q Consensus        25 ~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~  104 (302)
                      .+.+++|+++||||+||||+++|+.|+++|++|++++|+.+++++..+++.+.+.++.++.+|++|.++++++++++.+.
T Consensus        39 ~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~  118 (285)
T 2c07_A           39 YYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTE  118 (285)
T ss_dssp             CCCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHh
Confidence            35678999999999999999999999999999999999998888888888777778999999999999999999999999


Q ss_pred             CCCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCccccccc
Q 022103          105 FAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSIL  183 (302)
Q Consensus       105 ~g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~  183 (302)
                      ++++|+||||||.... ++.+.+.++|++++++|+.+++++++.+++.|.++ +.++||++||..+..+.+         
T Consensus       119 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~~~iv~isS~~~~~~~~---------  188 (285)
T 2c07_A          119 HKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINN-RYGRIINISSIVGLTGNV---------  188 (285)
T ss_dssp             CSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHH-TCEEEEEECCTHHHHCCT---------
T ss_pred             cCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC-CCCEEEEECChhhccCCC---------
Confidence            9999999999998754 57788999999999999999999999999999876 468999999988765432         


Q ss_pred             chhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC-
Q 022103          184 EDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ-  262 (302)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~-  262 (302)
                                                       ++..|++||++++.++++++.|+++.||+|++|+||+++|++.... 
T Consensus       189 ---------------------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~  235 (285)
T 2c07_A          189 ---------------------------------GQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKIS  235 (285)
T ss_dssp             ---------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CC
T ss_pred             ---------------------------------CCchHHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhhcC
Confidence                                             2367999999999999999999998999999999999999986542 


Q ss_pred             --------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          263 --------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       263 --------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                                    ...+|+++|..+++++. ++...++|+++..+++.
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~-~~~~~~~G~~i~v~gG~  283 (285)
T 2c07_A          236 EQIKKNIISNIPAGRMGTPEEVANLACFLSS-DKSGYINGRVFVIDGGL  283 (285)
T ss_dssp             HHHHHHHHTTCTTSSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTS
T ss_pred             HHHHHHHHhhCCCCCCCCHHHHHHHHHHHhC-CCcCCCCCCEEEeCCCc
Confidence                          13589999999999987 56677899999998875

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=100.00  E-value=2.3e-36  Score=268.06  Aligned_cols=225  Identities=28%  Similarity=0.320  Sum_probs=198.4

Q ss_pred             CcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHH-hhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCc
Q 022103           30 ETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESL-SEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAAL  108 (302)
Q Consensus        30 ~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l-~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~i  108 (302)
                      +|+++||||++|||++++++|+++|++|++++|+.+++++..+++ .+.+.++.++.+|++|+++++++++++.+.++++
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAI   81 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            689999999999999999999999999999999998888888877 4445678999999999999999999999999999


Q ss_pred             cEEEEcCCCCCC-C---CCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccc
Q 022103          109 DILVNNAGVSFN-D---IYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILE  184 (302)
Q Consensus       109 d~lv~~aG~~~~-~---~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~  184 (302)
                      |+||||||.... +   +.+.+.+++++.+++|+.+++++++.++|.|.++ +.++||++||..+..+.+          
T Consensus        82 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~isS~~~~~~~~----------  150 (250)
T 2cfc_A           82 DVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQ-GAGVIVNIASVASLVAFP----------  150 (250)
T ss_dssp             CEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTSCCT----------
T ss_pred             CEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC-CCCEEEEECChhhccCCC----------
Confidence            999999997643 3   6778999999999999999999999999999876 468999999988765432          


Q ss_pred             hhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCC-C-
Q 022103          185 DEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG-Q-  262 (302)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~-~-  262 (302)
                                                      ++..|++||++++.++++++.|+.++||+|++|+||+++|++... . 
T Consensus       151 --------------------------------~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~  198 (250)
T 2cfc_A          151 --------------------------------GRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLD  198 (250)
T ss_dssp             --------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHHHT
T ss_pred             --------------------------------CchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccCccccccC
Confidence                                            237899999999999999999998899999999999999998543 1 


Q ss_pred             ---------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          263 ---------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       263 ---------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                                     ...+|+++|..+++++. ++..+++|+++..+++..
T Consensus       199 ~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~-~~~~~~~G~~~~v~gG~~  248 (250)
T 2cfc_A          199 QPELRDQVLARIPQKEIGTAAQVADAVMFLAG-EDATYVNGAALVMDGAYT  248 (250)
T ss_dssp             SHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHS-TTCTTCCSCEEEESTTGG
T ss_pred             CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcC-chhhcccCCEEEECCcee
Confidence                           12489999999999987 567789999999998753

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=100.00  E-value=2.4e-36  Score=268.45  Aligned_cols=231  Identities=20%  Similarity=0.238  Sum_probs=201.6

Q ss_pred             cccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhh
Q 022103           25 KWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSN  104 (302)
Q Consensus        25 ~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~  104 (302)
                      .+++++|+++||||+||||++++++|+++|++|++++|+.++++...+++.+.+.++.++.+|++|+++++++++++.+.
T Consensus         6 ~~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   85 (255)
T 1fmc_A            6 NLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISK   85 (255)
T ss_dssp             GGCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence            34578999999999999999999999999999999999999888888888777778999999999999999999999999


Q ss_pred             CCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccc
Q 022103          105 FAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILE  184 (302)
Q Consensus       105 ~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~  184 (302)
                      ++++|+||||||.......+.+.++|++.+++|+.++++++++++|.|.++ +.++||++||..+..+.+          
T Consensus        86 ~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~~~iv~~sS~~~~~~~~----------  154 (255)
T 1fmc_A           86 LGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKN-GGGVILTITSMAAENKNI----------  154 (255)
T ss_dssp             HSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTCCCT----------
T ss_pred             cCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEEcchhhcCCCC----------
Confidence            999999999999865432378899999999999999999999999999876 568999999987764322          


Q ss_pred             hhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC--
Q 022103          185 DEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ--  262 (302)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~--  262 (302)
                                                      ++..|++||++++.++++++.++++.||+|++|+||.+.|++....  
T Consensus       155 --------------------------------~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~~~  202 (255)
T 1fmc_A          155 --------------------------------NMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVIT  202 (255)
T ss_dssp             --------------------------------TCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCC
T ss_pred             --------------------------------CCcccHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhhccC
Confidence                                            2467999999999999999999999999999999999999864321  


Q ss_pred             --------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcccC
Q 022103          263 --------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVK  299 (302)
Q Consensus       263 --------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  299 (302)
                                    ...+++++|..+++++. +...+++|++|..+++...
T Consensus       203 ~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~-~~~~~~~G~~~~v~gg~~~  252 (255)
T 1fmc_A          203 PEIEQKMLQHTPIRRLGQPQDIANAALFLCS-PAASWVSGQILTVSGGGVQ  252 (255)
T ss_dssp             HHHHHHHHHTCSSCSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTSCC
T ss_pred             hHHHHHHHhcCCcccCCCHHHHHHHHHHHhC-CccccCCCcEEEECCceec
Confidence                          23579999999999986 4566789999998887543

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=100.00  E-value=5.1e-37  Score=276.55  Aligned_cols=223  Identities=18%  Similarity=0.208  Sum_probs=192.3

Q ss_pred             cccCcEEEEeCC--CchHHHHHHHHHHHcCCEEEEEecChhh-HHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHh
Q 022103           27 WSKETIAIVTGA--NKGIGFALVKRLAELGLTVILTARDVER-GQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKS  103 (302)
Q Consensus        27 ~~~~k~vlItGa--s~gIG~ala~~l~~~G~~V~l~~r~~~~-~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~  103 (302)
                      ++++|+++||||  ++|||+++|++|+++|++|++++|+.++ +++..+++   +.++.++.+|++|+++++++++++.+
T Consensus         4 ~l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~   80 (269)
T 2h7i_A            4 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRL---PAKAPLLELDVQNEEHLASLAGRVTE   80 (269)
T ss_dssp             TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTS---SSCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhc---CCCceEEEccCCCHHHHHHHHHHHHH
Confidence            478999999999  9999999999999999999999999765 34443333   44688999999999999999999999


Q ss_pred             hCC---CccEEEEcCCCCC------CCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccc
Q 022103          104 NFA---ALDILVNNAGVSF------NDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKV  174 (302)
Q Consensus       104 ~~g---~id~lv~~aG~~~------~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~  174 (302)
                      ++|   ++|+||||||...      .++.+.+.++|++++++|+.++++++++++|.|.+.   ++||++||..+ .+  
T Consensus        81 ~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~---g~iv~iss~~~-~~--  154 (269)
T 2h7i_A           81 AIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPG---GSIVGMDFDPS-RA--  154 (269)
T ss_dssp             HHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE---EEEEEEECCCS-SC--
T ss_pred             HhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccC---CeEEEEcCccc-cc--
Confidence            998   9999999999764      356788999999999999999999999999999753   89999998765 22  


Q ss_pred             cCcccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcc
Q 022103          175 RNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFT  254 (302)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v  254 (302)
                                                              .+.+..|++||+++++|+++++.|++++||+||+|+||+|
T Consensus       155 ----------------------------------------~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v  194 (269)
T 2h7i_A          155 ----------------------------------------MPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPI  194 (269)
T ss_dssp             ----------------------------------------CTTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC
T ss_pred             ----------------------------------------cCchHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcc
Confidence                                                    1224789999999999999999999999999999999999


Q ss_pred             cCCCCC--------------------------CC--CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcccC
Q 022103          255 QTSMTQ--------------------------GQ--GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVK  299 (302)
Q Consensus       255 ~T~~~~--------------------------~~--~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  299 (302)
                      +|+|.+                          +.  +..+|+|+|..+++|++ +...+++|+++..+|....
T Consensus       195 ~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~rr~~~p~dvA~~v~~L~s-~~~~~itG~~i~vdGG~~~  266 (269)
T 2h7i_A          195 RTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDATPVAKTVCALLS-DWLPATTGDIIYADGGAHT  266 (269)
T ss_dssp             CCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTTCCCTTCCHHHHHHHHHHHS-SSCTTCCSEEEEESTTGGG
T ss_pred             cchhhhccccccchhhHHHHHHHHHHhhhccCCcccCCCCHHHHHHHHHHHhC-chhccCcceEEEecCCeee
Confidence            998632                          12  24689999999999997 6778899999999998643

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=100.00  E-value=1.2e-36  Score=271.88  Aligned_cols=239  Identities=23%  Similarity=0.241  Sum_probs=201.6

Q ss_pred             ccccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhh-CCCceeEEEeeCCCHHHHHHHHHHHH
Q 022103           24 TKWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSE-KGLPVNFFQLDVSDPSSIEAFVSWFK  102 (302)
Q Consensus        24 ~~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dlt~~~~~~~~~~~~~  102 (302)
                      ..+++++|+++||||++|||++++++|+++|++|++++|+.++.++..+++.+ .+.++.++.+|++|.++++++++++.
T Consensus         8 ~~~~~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   87 (265)
T 1h5q_A            8 FTISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQID   87 (265)
T ss_dssp             EEECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCcccCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHH
Confidence            34568899999999999999999999999999999999987666665555543 25678999999999999999999999


Q ss_pred             hhCCCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCccccc
Q 022103          103 SNFAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKS  181 (302)
Q Consensus       103 ~~~g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~  181 (302)
                      +.++++|+||||||.... ++.+.+.++|+..+++|+.+++++++++++.|.+++..++||++||..+..+.+...    
T Consensus        88 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~----  163 (265)
T 1h5q_A           88 ADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSL----  163 (265)
T ss_dssp             HHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEET----
T ss_pred             HhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhccccccc----
Confidence            999999999999998654 567789999999999999999999999999998763458999999988765432100    


Q ss_pred             ccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCC
Q 022103          182 ILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG  261 (302)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~  261 (302)
                                                     ..+.+...|++||++++.++++++.|++++||+|++|+||+++|++...
T Consensus       164 -------------------------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  212 (265)
T 1h5q_A          164 -------------------------------NGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAH  212 (265)
T ss_dssp             -------------------------------TEECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGG
T ss_pred             -------------------------------cccccccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCccccccccc
Confidence                                           0012247899999999999999999999999999999999999998654


Q ss_pred             C---------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          262 Q---------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       262 ~---------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                      .               ...+|+++|..+++++. ++..+++|+.+..+++..
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~-~~~~~~~G~~~~v~gG~~  263 (265)
T 1h5q_A          213 MDKKIRDHQASNIPLNRFAQPEEMTGQAILLLS-DHATYMTGGEYFIDGGQL  263 (265)
T ss_dssp             SCHHHHHHHHHTCTTSSCBCGGGGHHHHHHHHS-GGGTTCCSCEEEECTTGG
T ss_pred             cchhHHHHHHhcCcccCCCCHHHHHHHHHhhcc-CchhcCcCcEEEecCCEe
Confidence            2               23579999999999987 456779999999988753

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=100.00  E-value=1.8e-36  Score=270.92  Aligned_cols=229  Identities=29%  Similarity=0.325  Sum_probs=195.4

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCC-------CceeEEEeeCCCHHHHHHHHH
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKG-------LPVNFFQLDVSDPSSIEAFVS   99 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~-------~~~~~~~~Dlt~~~~~~~~~~   99 (302)
                      ++++|+++||||+||||+++++.|+++|++|++++|+.+++++..+++.+.+       .++.++.+|++|.++++++++
T Consensus         4 ~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   83 (264)
T 2pd6_A            4 RLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLE   83 (264)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHH
Confidence            4789999999999999999999999999999999999988888777765544       578899999999999999999


Q ss_pred             HHHhhCCCc-cEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCc
Q 022103          100 WFKSNFAAL-DILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNP  177 (302)
Q Consensus       100 ~~~~~~g~i-d~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~  177 (302)
                      ++.+.++++ |+||||||.... ++.+.+.++|+..+++|+.+++++++++++.|.+++..++||++||..+..+.+   
T Consensus        84 ~~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---  160 (264)
T 2pd6_A           84 QVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNV---  160 (264)
T ss_dssp             HHHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHCCT---
T ss_pred             HHHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccCCC---
Confidence            999999998 999999998654 567789999999999999999999999999998762268999999987765432   


Q ss_pred             ccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCC
Q 022103          178 NIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTS  257 (302)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~  257 (302)
                                                             ++..|++||++++.++++++.+++++||+|++|+||+++|+
T Consensus       161 ---------------------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~  201 (264)
T 2pd6_A          161 ---------------------------------------GQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATP  201 (264)
T ss_dssp             ---------------------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSC
T ss_pred             ---------------------------------------CChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeeccccc
Confidence                                                   23779999999999999999999989999999999999999


Q ss_pred             CCCCC---------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          258 MTQGQ---------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       258 ~~~~~---------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                      +....               ...+|+++|..+++++. +...+++|+.+..+|+..
T Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~-~~~~~~~G~~~~v~gg~~  256 (264)
T 2pd6_A          202 MTQKVPQKVVDKITEMIPMGHLGDPEDVADVVAFLAS-EDSGYITGTSVEVTGGLF  256 (264)
T ss_dssp             C----------CTGGGCTTCSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTC-
T ss_pred             chhhcCHHHHHHHHHhCCCCCCCCHHHHHHHHHHHcC-CcccCCCCCEEEECCCce
Confidence            86532               12478999999999986 456679999999998854

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=100.00  E-value=5.2e-36  Score=263.73  Aligned_cols=223  Identities=24%  Similarity=0.234  Sum_probs=185.2

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCc
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAAL  108 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~i  108 (302)
                      .+|+++||||+||||++++++|+++|++|++++|+.+++++..+++.    ++.++.+|++|.++++++++++.+.++++
T Consensus         4 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   79 (234)
T 2ehd_A            4 MKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELE----GALPLPGDVREEGDWARAVAAMEEAFGEL   79 (234)
T ss_dssp             CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST----TCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh----hceEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            47899999999999999999999999999999999888777766553    67889999999999999999999999999


Q ss_pred             cEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhh
Q 022103          109 DILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEE  187 (302)
Q Consensus       109 d~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~  187 (302)
                      |+||||||.... ++.+.+.++|++.+++|+.+++++++.+++.|.++ +.++||++||..+..+.+             
T Consensus        80 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~-~~~~iv~isS~~~~~~~~-------------  145 (234)
T 2ehd_A           80 SALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRR-GGGTIVNVGSLAGKNPFK-------------  145 (234)
T ss_dssp             CEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTT-TCEEEEEECCTTTTSCCT-------------
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCcEEEEECCchhcCCCC-------------
Confidence            999999997644 56788999999999999999999999999999876 579999999988764422             


Q ss_pred             hcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCCC----
Q 022103          188 LSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQG----  263 (302)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~~----  263 (302)
                                                   +...|+++|++++.++++++.|++++||+|+.|+||+++|+|.....    
T Consensus       146 -----------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~  196 (234)
T 2ehd_A          146 -----------------------------GGAAYNASKFGLLGLAGAAMLDLREANVRVVNVLPGSVDTGFAGNTPGQAW  196 (234)
T ss_dssp             -----------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEECC---------------
T ss_pred             -----------------------------CCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCcccccccccC
Confidence                                         23689999999999999999999999999999999999999876432    


Q ss_pred             CCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcccC
Q 022103          264 SHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVK  299 (302)
Q Consensus       264 ~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  299 (302)
                      ..+|+++|..+++++. ++..+++|.+.+..+...+
T Consensus       197 ~~~~~dvA~~~~~l~~-~~~~~~~g~~~~~~~~~~~  231 (234)
T 2ehd_A          197 KLKPEDVAQAVLFALE-MPGHAMVSEIELRPTRPTS  231 (234)
T ss_dssp             -CCHHHHHHHHHHHHH-SCCSSCCCEEECCC-----
T ss_pred             CCCHHHHHHHHHHHhC-CCcccccceEEEeecCCCC
Confidence            4689999999999997 5677899998888775543

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=100.00  E-value=3.1e-36  Score=267.45  Aligned_cols=228  Identities=23%  Similarity=0.324  Sum_probs=199.0

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      ++++|+++||||+||||++++++|+++|++|++++|+.+++++..+++... .++.++.+|++|+++++++++++.+.++
T Consensus         3 ~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (251)
T 1zk4_A            3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTP-DQIQFFQHDSSDEDGWTKLFDATEKAFG   81 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCT-TTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcc-CceEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            578999999999999999999999999999999999998888877777543 5789999999999999999999999999


Q ss_pred             CccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccch
Q 022103          107 ALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILED  185 (302)
Q Consensus       107 ~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~  185 (302)
                      ++|+||||||.... ++.+.+.++|++++++|+.+++++++.+++.|.+++..++||++||..+..+.+           
T Consensus        82 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~-----------  150 (251)
T 1zk4_A           82 PVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDP-----------  150 (251)
T ss_dssp             SCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCT-----------
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccCCC-----------
Confidence            99999999998654 567889999999999999999999999999998763228999999988765432           


Q ss_pred             hhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHcc--CCCcEEEEeecCcccCCCCCCC-
Q 022103          186 EELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYE--GEGISVNSYCPGFTQTSMTQGQ-  262 (302)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~--~~gI~V~~v~PG~v~T~~~~~~-  262 (302)
                                                     ++..|++||++++.++++++.|+.  +.||+|++|+||+++|++.... 
T Consensus       151 -------------------------------~~~~Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~  199 (251)
T 1zk4_A          151 -------------------------------SLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLP  199 (251)
T ss_dssp             -------------------------------TCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTST
T ss_pred             -------------------------------CCccchHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhcC
Confidence                                           247899999999999999999987  8899999999999999874321 


Q ss_pred             ---------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          263 ---------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       263 ---------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                                     ...+|+++|..+++++. +...+++|+++..+++..
T Consensus       200 ~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~-~~~~~~~G~~~~v~gG~~  249 (251)
T 1zk4_A          200 GAEEAMSQRTKTPMGHIGEPNDIAYICVYLAS-NESKFATGSEFVVDGGYT  249 (251)
T ss_dssp             THHHHHTSTTTCTTSSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGG
T ss_pred             chhhhHHHhhcCCCCCCcCHHHHHHHHHHHcC-cccccccCcEEEECCCcc
Confidence                           12579999999999987 456678999999998754

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=100.00  E-value=1.2e-36  Score=273.74  Aligned_cols=216  Identities=24%  Similarity=0.310  Sum_probs=191.2

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.++           +.++.++.+|++|.++++++++++.+.++
T Consensus         5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-----------~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   73 (264)
T 2dtx_A            5 DLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG-----------EAKYDHIECDVTNPDQVKASIDHIFKEYG   73 (264)
T ss_dssp             GGTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC-----------SCSSEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc-----------CCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            4789999999999999999999999999999999998754           34788999999999999999999999999


Q ss_pred             CccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccch
Q 022103          107 ALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILED  185 (302)
Q Consensus       107 ~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~  185 (302)
                      ++|+||||||.... ++.+.+.++|++++++|+.++++++++++|.|.++ +.++||++||..+..+.+           
T Consensus        74 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~~~~-----------  141 (264)
T 2dtx_A           74 SISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRS-RDPSIVNISSVQASIITK-----------  141 (264)
T ss_dssp             CCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTS-SSCEEEEECCGGGTSCCT-----------
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCcEEEEECCchhccCCC-----------
Confidence            99999999998654 57888999999999999999999999999999876 579999999988765432           


Q ss_pred             hhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCC----
Q 022103          186 EELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG----  261 (302)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~----  261 (302)
                                                     ++..|++||++++.|+++++.|+++. |+||+|+||+++|+|...    
T Consensus       142 -------------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~-i~vn~v~PG~v~t~~~~~~~~~  189 (264)
T 2dtx_A          142 -------------------------------NASAYVTSKHAVIGLTKSIALDYAPL-LRCNAVCPATIDTPLVRKAAEL  189 (264)
T ss_dssp             -------------------------------TBHHHHHHHHHHHHHHHHHHHHHTTT-SEEEEEEECSBCSHHHHHHHHH
T ss_pred             -------------------------------CchhHHHHHHHHHHHHHHHHHHhcCC-cEEEEEEeCCCcCcchhhhhhc
Confidence                                           24789999999999999999999888 999999999999987421    


Q ss_pred             ----------------------CCCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          262 ----------------------QGSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       262 ----------------------~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                                            ....+|+++|..+++++. ++..+++|+++..+|+..
T Consensus       190 ~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s-~~~~~~tG~~i~vdGG~~  247 (264)
T 2dtx_A          190 EVGSDPMRIEKKISEWGHEHPMQRIGKPQEVASAVAFLAS-REASFITGTCLYVDGGLS  247 (264)
T ss_dssp             HHCSCHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGG
T ss_pred             ccccCchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC-chhcCCCCcEEEECCCcc
Confidence                                  123689999999999987 566789999999998853

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=100.00  E-value=1.3e-36  Score=268.73  Aligned_cols=225  Identities=25%  Similarity=0.369  Sum_probs=198.4

Q ss_pred             CcEEEEeCCCchHHHHHHHHHHHcCCEEEE-EecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCc
Q 022103           30 ETIAIVTGANKGIGFALVKRLAELGLTVIL-TARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAAL  108 (302)
Q Consensus        30 ~k~vlItGas~gIG~ala~~l~~~G~~V~l-~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~i  108 (302)
                      ||+++||||+||||++++++|+++|++|++ .+|+.++.+...+++.+.+.++.++.+|++|.++++++++++.+.++++
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   80 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTI   80 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            589999999999999999999999999998 4899888888888777666788999999999999999999999999999


Q ss_pred             cEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhh
Q 022103          109 DILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEE  187 (302)
Q Consensus       109 d~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~  187 (302)
                      |+||||||.... ++.+.+.++|++.+++|+.+++++++.+++.|.++ +.++||++||..+..+.+             
T Consensus        81 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~~sS~~~~~~~~-------------  146 (244)
T 1edo_A           81 DVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKK-RKGRIINIASVVGLIGNI-------------  146 (244)
T ss_dssp             SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCTHHHHCCT-------------
T ss_pred             CEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc-CCCEEEEECChhhcCCCC-------------
Confidence            999999998754 56778999999999999999999999999999876 578999999987765432             


Q ss_pred             hcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC-----
Q 022103          188 LSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ-----  262 (302)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~-----  262 (302)
                                                   ++..|++||++++.++++++.|+.++||+|++|+||+++|+|....     
T Consensus       147 -----------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~  197 (244)
T 1edo_A          147 -----------------------------GQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGEDME  197 (244)
T ss_dssp             -----------------------------TCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCHHHH
T ss_pred             -----------------------------CCccchhhHHHHHHHHHHHHHHhhhcCCEEEEEeeCccccchhhhcChHHH
Confidence                                         2367999999999999999999999999999999999999875432     


Q ss_pred             ----------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          263 ----------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       263 ----------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                                ...+|+++|..+++++..+...+++|++|..+++.
T Consensus       198 ~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~~G~~~~v~gG~  242 (244)
T 1edo_A          198 KKILGTIPLGRTGQPENVAGLVEFLALSPAASYITGQAFTIDGGI  242 (244)
T ss_dssp             HHHHTSCTTCSCBCHHHHHHHHHHHHHCSGGGGCCSCEEEESTTT
T ss_pred             HHHhhcCCCCCCCCHHHHHHHHHHHhCCCccCCcCCCEEEeCCCc
Confidence                      13579999999999985466778999999998874

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=100.00  E-value=1.9e-36  Score=268.09  Aligned_cols=228  Identities=28%  Similarity=0.344  Sum_probs=199.6

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhh-CCCceeEEEeeCCCHHHHHHHHHHHHhh
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSE-KGLPVNFFQLDVSDPSSIEAFVSWFKSN  104 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dlt~~~~~~~~~~~~~~~  104 (302)
                      +++++|+++||||+||||++++++|+++|++|++++|+.++++...+++.+ .+.++.++.+|++|.++++++++++.+.
T Consensus         3 ~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   82 (248)
T 2pnf_A            3 IKLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNL   82 (248)
T ss_dssp             CCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence            457899999999999999999999999999999999999888887777754 3567899999999999999999999999


Q ss_pred             CCCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCccccccc
Q 022103          105 FAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSIL  183 (302)
Q Consensus       105 ~g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~  183 (302)
                      ++++|+||||||.... ++.+.+.++|++.+++|+.+++++++++++.|.++ +.++||++||..+..+.+         
T Consensus        83 ~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~~~iv~~sS~~~~~~~~---------  152 (248)
T 2pnf_A           83 VDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQ-RWGRIVNISSVVGFTGNV---------  152 (248)
T ss_dssp             SSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHH-TCEEEEEECCHHHHHCCT---------
T ss_pred             cCCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-CCcEEEEEccHHhcCCCC---------
Confidence            9999999999998654 56778999999999999999999999999999876 568999999987654422         


Q ss_pred             chhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC-
Q 022103          184 EDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ-  262 (302)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~-  262 (302)
                                                       ++..|+++|++++.++++++.|+.+.||+|++|+||+++|++.... 
T Consensus       153 ---------------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~  199 (248)
T 2pnf_A          153 ---------------------------------GQVNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAVLS  199 (248)
T ss_dssp             ---------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSC
T ss_pred             ---------------------------------CCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhhcc
Confidence                                             2367999999999999999999988899999999999999985432 


Q ss_pred             --------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          263 --------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       263 --------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                                    ...+++++|..+++++. +....++|++|..+++.
T Consensus       200 ~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~-~~~~~~~G~~~~v~gg~  247 (248)
T 2pnf_A          200 EEIKQKYKEQIPLGRFGSPEEVANVVLFLCS-ELASYITGEVIHVNGGM  247 (248)
T ss_dssp             HHHHHHHHHTCTTSSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTC
T ss_pred             HHHHHHHHhcCCCCCccCHHHHHHHHHHHhC-chhhcCCCcEEEeCCCc
Confidence                          23579999999999986 45567899999988864

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=100.00  E-value=1.1e-36  Score=269.65  Aligned_cols=227  Identities=28%  Similarity=0.377  Sum_probs=183.3

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEE-ecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILT-ARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~-~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      ++++|+++||||+||||++++++|+++|++|+++ .|+.+++++..+++.+.+.++.++.+|++|.++++++++++.+.+
T Consensus         2 ~l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (247)
T 2hq1_A            2 QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAF   81 (247)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            4678999999999999999999999999999998 677777888888887767789999999999999999999999999


Q ss_pred             CCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccc
Q 022103          106 AALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILE  184 (302)
Q Consensus       106 g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~  184 (302)
                      +++|+||||||.... ++.+.+.++|++.+++|+.+++++++++++.|.++ +.++||++||..+..+.+          
T Consensus        82 ~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~~~iv~~sS~~~~~~~~----------  150 (247)
T 2hq1_A           82 GRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQ-KSGKIINITSIAGIIGNA----------  150 (247)
T ss_dssp             SCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHH-TCEEEEEECC------------------
T ss_pred             CCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEEcChhhccCCC----------
Confidence            999999999998644 46678889999999999999999999999999876 468999999987765432          


Q ss_pred             hhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC--
Q 022103          185 DEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ--  262 (302)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~--  262 (302)
                                                      .+..|++||++++.++++++.|++++||+|++|+||++.|++....  
T Consensus       151 --------------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~  198 (247)
T 2hq1_A          151 --------------------------------GQANYAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDVLPD  198 (247)
T ss_dssp             ---------------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCH
T ss_pred             --------------------------------CCcHhHHHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchhhcch
Confidence                                            2367999999999999999999998999999999999999864321  


Q ss_pred             -------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          263 -------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       263 -------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                                   ...+++++|..+++++. ++..+++|++|..+++.
T Consensus       199 ~~~~~~~~~~~~~~~~~~~dva~~~~~l~~-~~~~~~~G~~~~v~gG~  245 (247)
T 2hq1_A          199 KVKEMYLNNIPLKRFGTPEEVANVVGFLAS-DDSNYITGQVINIDGGL  245 (247)
T ss_dssp             HHHHHHHTTSTTSSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTC
T ss_pred             HHHHHHHhhCCCCCCCCHHHHHHHHHHHcC-cccccccCcEEEeCCCc
Confidence                         23689999999999986 45567899999988875

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=3.5e-36  Score=265.83  Aligned_cols=232  Identities=26%  Similarity=0.374  Sum_probs=187.4

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcC--CEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELG--LTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G--~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      |++|+++||||++|||++++++|+++|  ++|++++|+.++++...+ +  .+.++.++.+|++|.++++++++++.+.+
T Consensus         1 m~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~-~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   77 (250)
T 1yo6_A            1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKS-I--KDSRVHVLPLTVTCDKSLDTFVSKVGEIV   77 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHT-C--CCTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHh-c--cCCceEEEEeecCCHHHHHHHHHHHHHhc
Confidence            467999999999999999999999999  999999999887655432 2  25678999999999999999999999988


Q ss_pred             C--CccEEEEcCCCCC-C-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcC------CC----CCcEEEecCCCccc
Q 022103          106 A--ALDILVNNAGVSF-N-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRS------PS----KSRILNISSRLGTL  171 (302)
Q Consensus       106 g--~id~lv~~aG~~~-~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~------~~----~~~iv~vsS~~~~~  171 (302)
                      +  ++|+||||||... . ++.+.+.++++..+++|+.+++++++++++.|.++      +.    .++||++||..+..
T Consensus        78 g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~  157 (250)
T 1yo6_A           78 GSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSI  157 (250)
T ss_dssp             GGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCS
T ss_pred             CCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCcccc
Confidence            8  9999999999875 3 56778999999999999999999999999998764      21    68999999988765


Q ss_pred             ccccCcccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeec
Q 022103          172 SKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCP  251 (302)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~P  251 (302)
                      +....                                   ...++++..|++||++++.++++++.+++++||+|++|+|
T Consensus       158 ~~~~~-----------------------------------~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~P  202 (250)
T 1yo6_A          158 TDNTS-----------------------------------GSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCP  202 (250)
T ss_dssp             TTCCS-----------------------------------TTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEEC
T ss_pred             CCccc-----------------------------------ccccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcC
Confidence            53211                                   0111345789999999999999999999988999999999


Q ss_pred             CcccCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          252 GFTQTSMTQGQGSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       252 G~v~T~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                      |+++|+|.......+++++|..+++++. .....++|+++.+++..+
T Consensus       203 g~v~t~~~~~~~~~~~~~~a~~~~~~~~-~~~~~~~G~~~~~~g~~~  248 (250)
T 1yo6_A          203 GWVQTNLGGKNAALTVEQSTAELISSFN-KLDNSHNGRFFMRNLKPY  248 (250)
T ss_dssp             CCC-------------HHHHHHHHHHHT-TCCGGGTTCEEETTEEEC
T ss_pred             CceecCCCCCCCCCCHHHHHHHHHHHHh-cccccCCCeEEEECCcCC
Confidence            9999999887777899999999999997 455668999999988753

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=100.00  E-value=9.8e-36  Score=266.23  Aligned_cols=225  Identities=21%  Similarity=0.280  Sum_probs=193.3

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+++++..+++   +.++.++.+|++|+++++++++++.+.+
T Consensus         8 ~~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~   84 (265)
T 2o23_A            8 RSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL---GNNCVFAPADVTSEKDVQTALALAKGKF   84 (265)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHHHC
Confidence            4578999999999999999999999999999999999998888777766   4578999999999999999999999999


Q ss_pred             CCccEEEEcCCCCCC-CCC------CCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCC-----CCCcEEEecCCCccccc
Q 022103          106 AALDILVNNAGVSFN-DIY------KNTVEHAETVIRTNFYGAKLLTESLLPLFRRSP-----SKSRILNISSRLGTLSK  173 (302)
Q Consensus       106 g~id~lv~~aG~~~~-~~~------~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~-----~~~~iv~vsS~~~~~~~  173 (302)
                      +++|+||||||.... ++.      +.+.++|++.+++|+.++++++++++|.|.++.     +.++||++||..+..+.
T Consensus        85 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~  164 (265)
T 2o23_A           85 GRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQ  164 (265)
T ss_dssp             SCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCC
T ss_pred             CCCCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcCCC
Confidence            999999999998644 333      378999999999999999999999999998752     36899999998876443


Q ss_pred             ccCcccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCc
Q 022103          174 VRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGF  253 (302)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~  253 (302)
                      +                                          ++..|++||++++.++++++.|++++||+|++|+||+
T Consensus       165 ~------------------------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~  202 (265)
T 2o23_A          165 V------------------------------------------GQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGL  202 (265)
T ss_dssp             T------------------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECC
T ss_pred             C------------------------------------------CCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEecc
Confidence            2                                          2478999999999999999999998999999999999


Q ss_pred             ccCCCCCCC----------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          254 TQTSMTQGQ----------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       254 v~T~~~~~~----------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                      ++|++....                ...+|+++|..+++++.   ..+++|+.+..+|+..
T Consensus       203 v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~---~~~~~G~~i~vdgG~~  260 (265)
T 2o23_A          203 FGTPLLTSLPEKVCNFLASQVPFPSRLGDPAEYAHLVQAIIE---NPFLNGEVIRLDGAIR  260 (265)
T ss_dssp             BCCC----------CHHHHTCSSSCSCBCHHHHHHHHHHHHH---CTTCCSCEEEESTTCC
T ss_pred             ccCccccccCHHHHHHHHHcCCCcCCCCCHHHHHHHHHHHhh---cCccCceEEEECCCEe
Confidence            999986532                22479999999999985   2468999999998854

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=100.00  E-value=2.7e-36  Score=268.12  Aligned_cols=216  Identities=20%  Similarity=0.150  Sum_probs=187.8

Q ss_pred             CcEEEEeCCCchHHHHHHHHHHHcCCEEEEE-e--cChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           30 ETIAIVTGANKGIGFALVKRLAELGLTVILT-A--RDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        30 ~k~vlItGas~gIG~ala~~l~~~G~~V~l~-~--r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      +|+++||||++|||+++|++|+++|++|+++ +  |+.+++++..+++  .+       +|+.|.++++++++++.+.++
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~--~~-------~~~~~~~~v~~~~~~~~~~~g   71 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESEN--PG-------TIALAEQKPERLVDATLQHGE   71 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHS--TT-------EEECCCCCGGGHHHHHGGGSS
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHh--CC-------CcccCHHHHHHHHHHHHHHcC
Confidence            5899999999999999999999999999999 6  9998888777766  22       234488888999999999999


Q ss_pred             CccEEEEcCCCCC----CCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccc
Q 022103          107 ALDILVNNAGVSF----NDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSI  182 (302)
Q Consensus       107 ~id~lv~~aG~~~----~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~  182 (302)
                      ++|+||||||...    .++.+.+.++|+.++++|+.++++++++++|.|.++ +.++||++||..+..+.+        
T Consensus        72 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-~~g~iv~isS~~~~~~~~--------  142 (244)
T 1zmo_A           72 AIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAA-GGASVIFITSSVGKKPLA--------  142 (244)
T ss_dssp             CEEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEEECCGGGTSCCT--------
T ss_pred             CCCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEEEECChhhCCCCC--------
Confidence            9999999999764    357788999999999999999999999999999877 579999999988865432        


Q ss_pred             cchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCC---
Q 022103          183 LEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMT---  259 (302)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~---  259 (302)
                                                        ++..|++||+++++|+++|+.|++++||+||+|+||+|+|+|.   
T Consensus       143 ----------------------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~  188 (244)
T 1zmo_A          143 ----------------------------------YNPLYGPARAATVALVESAAKTLSRDGILLYAIGPNFFNNPTYFPT  188 (244)
T ss_dssp             ----------------------------------TCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTTBCH
T ss_pred             ----------------------------------CchHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccc
Confidence                                              2478999999999999999999999999999999999999997   


Q ss_pred             CC----------------C-CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          260 QG----------------Q-GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       260 ~~----------------~-~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                      ..                . +..+|+++|..+++|+. +...+++|+++..+|+..
T Consensus       189 ~~~~~~~~~~~~~~~~~p~~r~~~pe~vA~~v~~l~s-~~~~~~tG~~i~vdgG~~  243 (244)
T 1zmo_A          189 SDWENNPELRERVDRDVPLGRLGRPDEMGALITFLAS-RRAAPIVGQFFAFTGGYL  243 (244)
T ss_dssp             HHHHHCHHHHHHHHHHCTTCSCBCHHHHHHHHHHHHT-TTTGGGTTCEEEESTTCC
T ss_pred             ccccchHHHHHHHhcCCCCCCCcCHHHHHHHHHHHcC-ccccCccCCEEEeCCCCC
Confidence            21                1 23589999999999997 677889999999998753

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=100.00  E-value=9e-36  Score=264.85  Aligned_cols=227  Identities=25%  Similarity=0.309  Sum_probs=197.4

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCce-eEEEeeCCCHHHHHHHHHHHHhh
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPV-NFFQLDVSDPSSIEAFVSWFKSN  104 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~-~~~~~Dlt~~~~~~~~~~~~~~~  104 (302)
                      +++++|+++||||+||||+++|++|+++|++|++++|+.+++++..+++.   .++ .++.+|++|.++++++++++.+ 
T Consensus         7 ~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~-   82 (254)
T 2wsb_A            7 FRLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELG---AAVAARIVADVTDAEAMTAAAAEAEA-   82 (254)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG---GGEEEEEECCTTCHHHHHHHHHHHHH-
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc---ccceeEEEEecCCHHHHHHHHHHHHh-
Confidence            46889999999999999999999999999999999999988887777763   356 8899999999999999999988 


Q ss_pred             CCCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCccccccc
Q 022103          105 FAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSIL  183 (302)
Q Consensus       105 ~g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~  183 (302)
                      ++++|+||||||.... ++.+.+.++|++.+++|+.++++++++++|.|.++ +.++||++||..+..+.+..       
T Consensus        83 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~~~iv~isS~~~~~~~~~~-------  154 (254)
T 2wsb_A           83 VAPVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVAR-GAGAIVNLGSMSGTIVNRPQ-------  154 (254)
T ss_dssp             HSCCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTSCCSSS-------
T ss_pred             hCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEEecchhccCCCCC-------
Confidence            8999999999998654 56788999999999999999999999999999876 57999999998876543221       


Q ss_pred             chhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCC--
Q 022103          184 EDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG--  261 (302)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~--  261 (302)
                                                       +...|++||++++.++++++.++.++||+|++|+||+++|++...  
T Consensus       155 ---------------------------------~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~  201 (254)
T 2wsb_A          155 ---------------------------------FASSYMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMR  201 (254)
T ss_dssp             ---------------------------------CBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHH
T ss_pred             ---------------------------------cchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhccc
Confidence                                             126799999999999999999998899999999999999987531  


Q ss_pred             ---------------CCCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          262 ---------------QGSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       262 ---------------~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                                     ....+|+++|..+++++. +...+++|+++..+++..
T Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~-~~~~~~~G~~~~v~gG~~  252 (254)
T 2wsb_A          202 ERPELFETWLDMTPMGRCGEPSEIAAAALFLAS-PAASYVTGAILAVDGGYT  252 (254)
T ss_dssp             TCHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGG
T ss_pred             cChHHHHHHHhcCCCCCCCCHHHHHHHHHHHhC-cccccccCCEEEECCCEe
Confidence                           123589999999999986 456679999999998753

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=1.2e-36  Score=270.49  Aligned_cols=220  Identities=24%  Similarity=0.262  Sum_probs=187.8

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.+++++.. ++    .++.++.+|++|++++++    +.+.++
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~----~~~~~~~~D~~~~~~~~~----~~~~~~   73 (246)
T 2ag5_A            3 RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-KY----PGIQTRVLDVTKKKQIDQ----FANEVE   73 (246)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG-GS----TTEEEEECCTTCHHHHHH----HHHHCS
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hc----cCceEEEeeCCCHHHHHH----HHHHhC
Confidence            468999999999999999999999999999999999987765443 22    268889999999999884    444568


Q ss_pred             CccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccch
Q 022103          107 ALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILED  185 (302)
Q Consensus       107 ~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~  185 (302)
                      ++|+||||||.... ++.+.+.++|+..+++|+.++++++++++|.|.++ +.++||++||..+..+.+           
T Consensus        74 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~~-----------  141 (246)
T 2ag5_A           74 RLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQ-KSGNIINMSSVASSVKGV-----------  141 (246)
T ss_dssp             CCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCSBTTTBCC-----------
T ss_pred             CCCEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCceEEEEechHhCcCCC-----------
Confidence            99999999998654 56788999999999999999999999999999876 478999999988765432           


Q ss_pred             hhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCC----
Q 022103          186 EELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG----  261 (302)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~----  261 (302)
                                                    .++..|++||++++.++++++.|++++||+||+|+||+++|++...    
T Consensus       142 ------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~  191 (246)
T 2ag5_A          142 ------------------------------VNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQA  191 (246)
T ss_dssp             ------------------------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHH
T ss_pred             ------------------------------CCCccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchhhhhhc
Confidence                                          1347899999999999999999999999999999999999987432    


Q ss_pred             ----------------C-CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          262 ----------------Q-GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       262 ----------------~-~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                                      . ...+|+++|..+++|+. ++..+++|+++..+|+..
T Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l~s-~~~~~~tG~~i~vdgG~~  244 (246)
T 2ag5_A          192 RGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLAS-DESAYVTGNPVIIDGGWS  244 (246)
T ss_dssp             SSSHHHHHHHHHHTCTTSSCEEHHHHHHHHHHHHS-GGGTTCCSCEEEECTTGG
T ss_pred             ccCcHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhC-ccccCCCCCEEEECCCcc
Confidence                            1 23579999999999987 567789999999998854

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=100.00  E-value=5.6e-36  Score=265.09  Aligned_cols=218  Identities=28%  Similarity=0.323  Sum_probs=189.7

Q ss_pred             CcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCcc
Q 022103           30 ETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALD  109 (302)
Q Consensus        30 ~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id  109 (302)
                      +|+++||||++|||+++|++|+++|++|++++|+.++   ..+++   +  +.++.+|+++ ++++++++++.+.++++|
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~---~~~~~---~--~~~~~~D~~~-~~~~~~~~~~~~~~g~id   72 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEE---AAQSL---G--AVPLPTDLEK-DDPKGLVKRALEALGGLH   72 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHH---HHHHH---T--CEEEECCTTT-SCHHHHHHHHHHHHTSCC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH---HHHhh---C--cEEEecCCch-HHHHHHHHHHHHHcCCCC
Confidence            6899999999999999999999999999999999866   23333   2  7789999999 999999999999999999


Q ss_pred             EEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhh
Q 022103          110 ILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEEL  188 (302)
Q Consensus       110 ~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  188 (302)
                      +||||||.... ++.+.+.++|++++++|+.++++++++++|.|.++ +.++||++||..+..+..              
T Consensus        73 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~~--------------  137 (239)
T 2ekp_A           73 VLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEA-GWGRVLFIGSVTTFTAGG--------------  137 (239)
T ss_dssp             EEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTSCCT--------------
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEEEECchhhccCCC--------------
Confidence            99999997654 57788999999999999999999999999999876 579999999988765421              


Q ss_pred             cHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCC-------
Q 022103          189 SEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG-------  261 (302)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~-------  261 (302)
                                                ++++..|++||++++.++++++.|++++||+||+|+||+++|+|...       
T Consensus       138 --------------------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~  191 (239)
T 2ekp_A          138 --------------------------PVPIPAYTTAKTALLGLTRALAKEWARLGIRVNLLCPGYVETEFTLPLRQNPEL  191 (239)
T ss_dssp             --------------------------TSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHH
T ss_pred             --------------------------CCCCccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCccCchhhccccCHHH
Confidence                                      12347899999999999999999999999999999999999998531       


Q ss_pred             ---------C-CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          262 ---------Q-GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       262 ---------~-~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                               . ...+|+++|..+++++. +...+++|+++..+|+..
T Consensus       192 ~~~~~~~~p~~~~~~~~dvA~~~~~l~s-~~~~~~tG~~~~vdgG~~  237 (239)
T 2ekp_A          192 YEPITARIPMGRWARPEEIARVAAVLCG-DEAEYLTGQAVAVDGGFL  237 (239)
T ss_dssp             HHHHHTTCTTSSCBCHHHHHHHHHHHTS-GGGTTCCSCEEEESTTTT
T ss_pred             HHHHHhcCCCCCCcCHHHHHHHHHHHcC-chhcCCCCCEEEECCCcc
Confidence                     1 23589999999999987 567789999999998853

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=100.00  E-value=1.6e-35  Score=270.09  Aligned_cols=230  Identities=20%  Similarity=0.198  Sum_probs=198.3

Q ss_pred             cccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhC-CCceeEEEeeCCCHHHHHHHHHHHHh
Q 022103           25 KWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEK-GLPVNFFQLDVSDPSSIEAFVSWFKS  103 (302)
Q Consensus        25 ~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dlt~~~~~~~~~~~~~~  103 (302)
                      ..++++|+++||||+||||+++|++|+++|++|++++|+.+++++..+++.+. +.++.++.+|++|.++++++++++.+
T Consensus        21 ~~~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~  100 (302)
T 1w6u_A           21 PNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIK  100 (302)
T ss_dssp             TTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHH
Confidence            45688999999999999999999999999999999999999888888887654 56789999999999999999999999


Q ss_pred             hCCCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccc
Q 022103          104 NFAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSI  182 (302)
Q Consensus       104 ~~g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~  182 (302)
                      .++++|+||||||.... ++.+.+.++|+..+++|+.+++++++++++.|.++...++||++||..+..+.+        
T Consensus       101 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~--------  172 (302)
T 1w6u_A          101 VAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSG--------  172 (302)
T ss_dssp             HTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCT--------
T ss_pred             HcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccCCC--------
Confidence            99999999999997643 566789999999999999999999999999997543568999999987764422        


Q ss_pred             cchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCC-CCCC
Q 022103          183 LEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTS-MTQG  261 (302)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~-~~~~  261 (302)
                                                        +...|++||++++.++++++.+++++||+|++|+||+++|+ +...
T Consensus       173 ----------------------------------~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~  218 (302)
T 1w6u_A          173 ----------------------------------FVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSR  218 (302)
T ss_dssp             ----------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------
T ss_pred             ----------------------------------CcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhh
Confidence                                              24689999999999999999999989999999999999987 4332


Q ss_pred             C-----------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          262 Q-----------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       262 ~-----------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                      .                 ...+|+++|..+++++. +...+++|++|..+++.
T Consensus       219 ~~~~~~~~~~~~~~~p~~~~~~~~dva~~~~~l~~-~~~~~~~G~~~~v~gg~  270 (302)
T 1w6u_A          219 LDPTGTFEKEMIGRIPCGRLGTVEELANLAAFLCS-DYASWINGAVIKFDGGE  270 (302)
T ss_dssp             CCTTSHHHHHHHTTCTTSSCBCHHHHHHHHHHHTS-GGGTTCCSCEEEESTTH
T ss_pred             cccchhhHHHHHhcCCcCCCCCHHHHHHHHHHHcC-CcccccCCCEEEECCCe
Confidence            1                 12479999999999986 55667899999988874

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=100.00  E-value=7.7e-37  Score=271.45  Aligned_cols=213  Identities=23%  Similarity=0.252  Sum_probs=185.4

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHH-cCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAE-LGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~-~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      .++|++|||||++|||+++|++|++ .|++|++.+|+.+.          ....+.++.+|++|.++++++++.+.  ++
T Consensus         2 ~~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~----------~~~~~~~~~~Dv~~~~~v~~~~~~~~--~~   69 (244)
T 4e4y_A            2 NAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSF----------SAENLKFIKADLTKQQDITNVLDIIK--NV   69 (244)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCC----------CCTTEEEEECCTTCHHHHHHHHHHTT--TC
T ss_pred             CCCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEecccccc----------ccccceEEecCcCCHHHHHHHHHHHH--hC
Confidence            4689999999999999999999999 78999999998641          12367899999999999999996554  68


Q ss_pred             CccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccch
Q 022103          107 ALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILED  185 (302)
Q Consensus       107 ~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~  185 (302)
                      ++|+||||||.... ++.+.+.++|++++++|+.++++++++++|.|.+.   ++||++||..+..+.+           
T Consensus        70 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~---g~iv~~sS~~~~~~~~-----------  135 (244)
T 4e4y_A           70 SFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVG---ASIVFNGSDQCFIAKP-----------  135 (244)
T ss_dssp             CEEEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEE---EEEEEECCGGGTCCCT-----------
T ss_pred             CCCEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccC---cEEEEECCHHHccCCC-----------
Confidence            99999999998755 67889999999999999999999999999999764   8999999998875532           


Q ss_pred             hhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCC----
Q 022103          186 EELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG----  261 (302)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~----  261 (302)
                                                     ++.+|++||+|+++|+++|+.|++++||+||+|+||+|+|+|.+.    
T Consensus       136 -------------------------------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~  184 (244)
T 4e4y_A          136 -------------------------------NSFAYTLSKGAIAQMTKSLALDLAKYQIRVNTVCPGTVDTDLYRNLIQK  184 (244)
T ss_dssp             -------------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESCBCCHHHHHHHHH
T ss_pred             -------------------------------CCchhHHHHHHHHHHHHHHHHHHHHcCeEEEEEecCccCchhhHHHHHh
Confidence                                           247899999999999999999999999999999999999997532    


Q ss_pred             ----------------------CCCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          262 ----------------------QGSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       262 ----------------------~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                                            .+..+|+++|..+++|+. +...+++|+++..+|+..
T Consensus       185 ~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s-~~~~~itG~~i~vdGG~~  242 (244)
T 4e4y_A          185 YANNVGISFDEAQKQEEKEFPLNRIAQPQEIAELVIFLLS-DKSKFMTGGLIPIDGGYT  242 (244)
T ss_dssp             HHHHHTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGG
T ss_pred             hhhhcCCCHHHHHHHHhhcCCCCCCcCHHHHHHHHHHHhc-CccccccCCeEeECCCcc
Confidence                                  123689999999999997 577789999999999865

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=1e-36  Score=303.87  Aligned_cols=223  Identities=24%  Similarity=0.298  Sum_probs=193.5

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecCh---------hhHHHHHHHHhhCCCceeEEEeeCCCHHHHHH
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDV---------ERGQRAVESLSEKGLPVNFFQLDVSDPSSIEA   96 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~---------~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~   96 (302)
                      +++++|+++||||++|||+++|+.|+++|++|++.+|+.         ++++++.+++.+.+.++   .+|++|.+++++
T Consensus         4 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~---~~d~~d~~~~~~   80 (604)
T 2et6_A            4 VDFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVA---VADYNNVLDGDK   80 (604)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCEE---EEECCCTTCHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCeE---EEEcCCHHHHHH
Confidence            457899999999999999999999999999999998765         66777888887666543   368898888999


Q ss_pred             HHHHHHhhCCCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCccccccc
Q 022103           97 FVSWFKSNFAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVR  175 (302)
Q Consensus        97 ~~~~~~~~~g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~  175 (302)
                      +++++.++||++|+||||||+... ++.+.+.++|++++++|+.|+++++|+++|+|+++ +.|+||++||..+..+.+.
T Consensus        81 ~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~-~~G~IVnisS~ag~~~~~~  159 (604)
T 2et6_A           81 IVETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQ-KYGRIVNTSSPAGLYGNFG  159 (604)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCHHHHHCCTT
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCCEEEEECCHHHcCCCCC
Confidence            999999999999999999998754 67889999999999999999999999999999876 5799999999988765432


Q ss_pred             CcccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCccc
Q 022103          176 NPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQ  255 (302)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~  255 (302)
                                                                +..|++||+|+.+|+++|+.|++++|||||+|+|| +.
T Consensus       160 ------------------------------------------~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg-~~  196 (604)
T 2et6_A          160 ------------------------------------------QANYASAKSALLGFAETLAKEGAKYNIKANAIAPL-AR  196 (604)
T ss_dssp             ------------------------------------------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-CC
T ss_pred             ------------------------------------------chHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC-Cc
Confidence                                                      36799999999999999999999999999999998 68


Q ss_pred             CCCCCCC------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          256 TSMTQGQ------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       256 T~~~~~~------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                      |+|....      ...+|+++|..+++|++ +. .+++|+++..+|+.
T Consensus       197 T~m~~~~~~~~~~~~~~pe~vA~~v~~L~s-~~-~~itG~~~~vdgG~  242 (604)
T 2et6_A          197 SRMTESIMPPPMLEKLGPEKVAPLVLYLSS-AE-NELTGQFFEVAAGF  242 (604)
T ss_dssp             CHHHHTTSCHHHHTTCSHHHHHHHHHHHTS-SS-CCCCSCEEEEETTE
T ss_pred             CccccccCChhhhccCCHHHHHHHHHHHhC-Cc-ccCCCCEEEECCCe
Confidence            8875432      23589999999999997 45 88999999988874

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=100.00  E-value=3.2e-36  Score=274.26  Aligned_cols=229  Identities=29%  Similarity=0.405  Sum_probs=189.2

Q ss_pred             cccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhh
Q 022103           25 KWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSN  104 (302)
Q Consensus        25 ~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~  104 (302)
                      ..+++||+++||||++|||+++|++|+++|++|++++|+.+++++..+++   +.++.++.+|++|.++++++++++   
T Consensus        11 ~~~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~v~~~~~~~---   84 (291)
T 3rd5_A           11 LPSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTM---AGQVEVRELDLQDLSSVRRFADGV---   84 (291)
T ss_dssp             CCCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTS---SSEEEEEECCTTCHHHHHHHHHTC---
T ss_pred             ccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---cCCeeEEEcCCCCHHHHHHHHHhc---
Confidence            35689999999999999999999999999999999999998887776655   457899999999999999998876   


Q ss_pred             CCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccc
Q 022103          105 FAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILE  184 (302)
Q Consensus       105 ~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~  184 (302)
                       +++|+||||||+..+. .+.+.++|+.++++|+.++++++++++|.|.+     +||++||..+..+.....+.     
T Consensus        85 -~~iD~lv~nAg~~~~~-~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~-----riv~isS~~~~~~~~~~~~~-----  152 (291)
T 3rd5_A           85 -SGADVLINNAGIMAVP-YALTVDGFESQIGTNHLGHFALTNLLLPRLTD-----RVVTVSSMAHWPGRINLEDL-----  152 (291)
T ss_dssp             -CCEEEEEECCCCCSCC-CCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEE-----EEEEECCGGGTTCCCCSSCT-----
T ss_pred             -CCCCEEEECCcCCCCc-ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----heeEeechhhccCCCCcccc-----
Confidence             7899999999987543 56788999999999999999999999999863     89999999887654332110     


Q ss_pred             hhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCC--cEEEEeecCcccCCCCCCC
Q 022103          185 DEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEG--ISVNSYCPGFTQTSMTQGQ  262 (302)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~g--I~V~~v~PG~v~T~~~~~~  262 (302)
                                             .+. ...++++.+|++||+|++.|+++|+.|++++|  |+|++|+||+|+|+|.+..
T Consensus       153 -----------------------~~~-~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~  208 (291)
T 3rd5_A          153 -----------------------NWR-SRRYSPWLAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGAS  208 (291)
T ss_dssp             -----------------------TCS-SSCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC----
T ss_pred             -----------------------ccc-ccCCCCcchHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCcccccccc
Confidence                                   000 11234457899999999999999999998877  9999999999999998764


Q ss_pred             CC---------------CCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          263 GS---------------HTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       263 ~~---------------~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                      ..               .+|+++|..+++++..   ++++|+++..+|+..
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~l~~~---~~~~G~~~~vdgG~~  256 (291)
T 3rd5_A          209 GRKLGDALMSAATRVVATDADFGARQTLYAASQ---DLPGDSFVGPRFGYL  256 (291)
T ss_dssp             ----------------CHHHHHHHHHHHHHHHS---CCCTTCEEEETTSSS
T ss_pred             chHHHHHHHHHHHHHHhCCHHHHHHHHHHHHcC---CCCCCceeCCccccc
Confidence            21               2499999999999983   379999999987654

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=100.00  E-value=1.3e-35  Score=268.01  Aligned_cols=231  Identities=21%  Similarity=0.319  Sum_probs=200.6

Q ss_pred             cccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhh
Q 022103           25 KWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSN  104 (302)
Q Consensus        25 ~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~  104 (302)
                      .+++++|+++||||++|||++++++|+++|++|++++|+.++.+...+++.+.+.++.++.+|++|.++++++++++.+.
T Consensus        29 ~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~  108 (279)
T 3ctm_A           29 LFSLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKD  108 (279)
T ss_dssp             GGCCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHH
Confidence            35688999999999999999999999999999999999988877777777665678899999999999999999999999


Q ss_pred             CCCccEEEEcCCCCCC--CCC-CCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCccccc
Q 022103          105 FAALDILVNNAGVSFN--DIY-KNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKS  181 (302)
Q Consensus       105 ~g~id~lv~~aG~~~~--~~~-~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~  181 (302)
                      ++++|+||||||....  ++. +.+.++|++.+++|+.+++++++.+++.|.++ +.++||++||..+..+..       
T Consensus       109 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~~~iv~isS~~~~~~~~-------  180 (279)
T 3ctm_A          109 FGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKN-GKGSLIITSSISGKIVNI-------  180 (279)
T ss_dssp             HSCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEEEECCCTTSCC---------
T ss_pred             hCCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCeEEEECchHhccCCC-------
Confidence            9999999999997643  445 78899999999999999999999999999876 579999999998764411       


Q ss_pred             ccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCC
Q 022103          182 ILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG  261 (302)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~  261 (302)
                                                       ++++..|++||++++.++++++.|++++| +|++|+||+++|+|...
T Consensus       181 ---------------------------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~  226 (279)
T 3ctm_A          181 ---------------------------------PQLQAPYNTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDF  226 (279)
T ss_dssp             ----------------------------------CCHHHHHHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSS
T ss_pred             ---------------------------------CCCcccHHHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCccccccc
Confidence                                             12247899999999999999999999999 99999999999999753


Q ss_pred             C---------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          262 Q---------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       262 ~---------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                      .               ...+|+++|..+++++. +...+++|+++..+|+..
T Consensus       227 ~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s-~~~~~~tG~~i~vdgG~~  277 (279)
T 3ctm_A          227 ASKDMKAKWWQLTPLGREGLTQELVGGYLYLAS-NASTFTTGSDVVIDGGYT  277 (279)
T ss_dssp             CCHHHHHHHHHHSTTCSCBCGGGTHHHHHHHHS-GGGTTCCSCEEEESTTCC
T ss_pred             cChHHHHHHHHhCCccCCcCHHHHHHHHHHHhC-ccccCccCCEEEECCCee
Confidence            2               13579999999999987 566779999999998854

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=100.00  E-value=1.2e-35  Score=266.20  Aligned_cols=233  Identities=23%  Similarity=0.289  Sum_probs=198.6

Q ss_pred             cccccCcEEEEeCCCchHHHHHHHHHHHcC---CEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHH
Q 022103           25 KWWSKETIAIVTGANKGIGFALVKRLAELG---LTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWF  101 (302)
Q Consensus        25 ~~~~~~k~vlItGas~gIG~ala~~l~~~G---~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~  101 (302)
                      ...+++|+++||||++|||+++|++|+++|   ++|++++|+.++.+.. +++.+.+.++.++.+|++|.++++++++++
T Consensus        16 ~~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~-~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~   94 (267)
T 1sny_A           16 PRGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKEL-EDLAKNHSNIHILEIDLRNFDAYDKLVADI   94 (267)
T ss_dssp             ----CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHH-HHHHHHCTTEEEEECCTTCGGGHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHH-HHhhccCCceEEEEecCCChHHHHHHHHHH
Confidence            345788999999999999999999999999   9999999998765543 444444568999999999999999999999


Q ss_pred             HhhCC--CccEEEEcCCCCC-C-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcC------CC----CCcEEEecCC
Q 022103          102 KSNFA--ALDILVNNAGVSF-N-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRS------PS----KSRILNISSR  167 (302)
Q Consensus       102 ~~~~g--~id~lv~~aG~~~-~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~------~~----~~~iv~vsS~  167 (302)
                      .+.++  ++|+||||||... . ++.+.+.++++..+++|+.+++++++++++.|.++      +.    .++||++||.
T Consensus        95 ~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~  174 (267)
T 1sny_A           95 EGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSI  174 (267)
T ss_dssp             HHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCG
T ss_pred             HHhcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEecc
Confidence            99888  8999999999875 3 56778999999999999999999999999999764      11    5899999998


Q ss_pred             CcccccccCcccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEE
Q 022103          168 LGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVN  247 (302)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~  247 (302)
                      .+..+...                                       .++...|++||++++.|+++++.++.++||+|+
T Consensus       175 ~~~~~~~~---------------------------------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~  215 (267)
T 1sny_A          175 LGSIQGNT---------------------------------------DGGMYAYRTSKSALNAATKSLSVDLYPQRIMCV  215 (267)
T ss_dssp             GGCSTTCC---------------------------------------SCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEE
T ss_pred             cccccCCC---------------------------------------CCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEE
Confidence            88654321                                       112467999999999999999999998999999


Q ss_pred             EeecCcccCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          248 SYCPGFTQTSMTQGQGSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       248 ~v~PG~v~T~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                      +|+||+|+|+|.......+|+++|..+++++.. .....+|.++.++|+.+
T Consensus       216 ~v~Pg~v~t~~~~~~~~~~~~~~a~~~~~~~~~-~~~~~~G~~~~~~g~~~  265 (267)
T 1sny_A          216 SLHPGWVKTDMGGSSAPLDVPTSTGQIVQTISK-LGEKQNGGFVNYDGTPL  265 (267)
T ss_dssp             EECCCSBCSTTTCTTCSBCHHHHHHHHHHHHHH-CCGGGTTCEECTTSCBC
T ss_pred             EeCCcceecCCCCCCCCCCHHHHHHHHHHHHHh-cCcCCCCcEEccCCcCc
Confidence            999999999998877778999999999999874 55668999999988754

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=100.00  E-value=9.3e-36  Score=263.15  Aligned_cols=225  Identities=28%  Similarity=0.374  Sum_probs=197.2

Q ss_pred             CcEEEEeCCCchHHHHHHHHHHHcCCEEEEE-ecChhhHHHHHHHHhhCCCceeE-EEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           30 ETIAIVTGANKGIGFALVKRLAELGLTVILT-ARDVERGQRAVESLSEKGLPVNF-FQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        30 ~k~vlItGas~gIG~ala~~l~~~G~~V~l~-~r~~~~~~~~~~~l~~~~~~~~~-~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      +|+++||||+||||++++++|+++|++|+++ +|+.+++++..+++...+.++.. +.+|++|.++++++++++.+.+++
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGG   80 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcCC
Confidence            4789999999999999999999999999998 89998888888888776667777 999999999999999999999999


Q ss_pred             ccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchh
Q 022103          108 LDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDE  186 (302)
Q Consensus       108 id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~  186 (302)
                      +|+||||||.... ++.+.+.++|++.+++|+.+++++++++++.|.++ +.++||++||..+..+.+            
T Consensus        81 ~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-~~~~iv~~sS~~~~~~~~------------  147 (245)
T 2ph3_A           81 LDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKA-RFGRIVNITSVVGILGNP------------  147 (245)
T ss_dssp             CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCTHHHHCCS------------
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhc-CCCEEEEEeChhhccCCC------------
Confidence            9999999998654 56788999999999999999999999999999876 468999999987765432            


Q ss_pred             hhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC----
Q 022103          187 ELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ----  262 (302)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~----  262 (302)
                                                    ++..|++||++++.++++++.|+.++||+|++|+||+++|++....    
T Consensus       148 ------------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~  197 (245)
T 2ph3_A          148 ------------------------------GQANYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTERLPQEV  197 (245)
T ss_dssp             ------------------------------SBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHH
T ss_pred             ------------------------------CCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcchhhcCHHH
Confidence                                          2367999999999999999999988899999999999999875431    


Q ss_pred             -----------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          263 -----------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       263 -----------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                                 ...+++++|..+++++. ++..+++|++|..+++..
T Consensus       198 ~~~~~~~~~~~~~~~~~dva~~~~~l~~-~~~~~~~G~~~~v~gg~~  243 (245)
T 2ph3_A          198 KEAYLKQIPAGRFGRPEEVAEAVAFLVS-EKAGYITGQTLCVDGGLT  243 (245)
T ss_dssp             HHHHHHTCTTCSCBCHHHHHHHHHHHTS-GGGTTCCSCEEEESTTCS
T ss_pred             HHHHHhcCCCCCCcCHHHHHHHHHHHhC-cccccccCCEEEECCCCC
Confidence                       23589999999999986 455678999999988753

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=100.00  E-value=3.2e-36  Score=269.18  Aligned_cols=218  Identities=17%  Similarity=0.132  Sum_probs=188.6

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCccE
Q 022103           31 TIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDI  110 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id~  110 (302)
                      |+++||||++|||+++|++|+++|++|++++|+.++++...+ +...+.++..+     |.++++++++++.+.++++|+
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-l~~~~~~~~~~-----d~~~v~~~~~~~~~~~g~iD~   75 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEA-FAETYPQLKPM-----SEQEPAELIEAVTSAYGQVDV   75 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHH-HHHHCTTSEEC-----CCCSHHHHHHHHHHHHSCCCE
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HHhcCCcEEEE-----CHHHHHHHHHHHHHHhCCCCE
Confidence            689999999999999999999999999999999888777665 65545555444     777888899999999999999


Q ss_pred             EEEcCCCC-CC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhh
Q 022103          111 LVNNAGVS-FN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEEL  188 (302)
Q Consensus       111 lv~~aG~~-~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  188 (302)
                      ||||||.. .. ++.+.+.++|++++++|+.++++++++++|.|.++ +.++||++||..+..+.+              
T Consensus        76 lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~~--------------  140 (254)
T 1zmt_A           76 LVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKR-KSGHIIFITSATPFGPWK--------------  140 (254)
T ss_dssp             EEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEEEECCSTTTSCCT--------------
T ss_pred             EEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEEEECCcccccCCC--------------
Confidence            99999986 33 57888999999999999999999999999999876 469999999998875532              


Q ss_pred             cHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcc---------cCCCC
Q 022103          189 SEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFT---------QTSMT  259 (302)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v---------~T~~~  259 (302)
                                                  .+..|++||++++.|+++++.|++++||+||+|+||+|         +|+|.
T Consensus       141 ----------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~  192 (254)
T 1zmt_A          141 ----------------------------ELSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPW  192 (254)
T ss_dssp             ----------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHH
T ss_pred             ----------------------------CchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCccccccccccCCCccc
Confidence                                        24789999999999999999999999999999999999         88875


Q ss_pred             CCC--------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          260 QGQ--------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       260 ~~~--------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                      ...              ...+|+++|..+++++. +...+++|+++..+|+..
T Consensus       193 ~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s-~~~~~~tG~~~~vdgG~~  244 (254)
T 1zmt_A          193 KTNPEHVAHVKKVTALQRLGTQKELGELVAFLAS-GSCDYLTGQVFWLAGGFP  244 (254)
T ss_dssp             TTCHHHHHHHHHHSSSSSCBCHHHHHHHHHHHHT-TSCGGGTTCEEEESTTCC
T ss_pred             ccChHHHHHHhccCCCCCCcCHHHHHHHHHHHhC-cccCCccCCEEEECCCch
Confidence            431              23589999999999987 667889999999998854

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=100.00  E-value=1.8e-35  Score=267.58  Aligned_cols=218  Identities=27%  Similarity=0.305  Sum_probs=188.2

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      ++++|+++||||+||||+++|++|+++|++|++++|+.+++++..+++   +.++.++.+|++|.++++++++++.+.++
T Consensus         2 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g   78 (281)
T 3m1a_A            2 SESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAY---PDRAEAISLDVTDGERIDVVAADVLARYG   78 (281)
T ss_dssp             --CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHC---TTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc---cCCceEEEeeCCCHHHHHHHHHHHHHhCC
Confidence            357899999999999999999999999999999999998887766654   45789999999999999999999999999


Q ss_pred             CccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccch
Q 022103          107 ALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILED  185 (302)
Q Consensus       107 ~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~  185 (302)
                      ++|+||||||.... ++.+.+.++|+.++++|+.++++++++++|.|+++ +.++||++||..+..+.+           
T Consensus        79 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~~~iv~~sS~~~~~~~~-----------  146 (281)
T 3m1a_A           79 RVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRER-GSGSVVNISSFGGQLSFA-----------  146 (281)
T ss_dssp             CCSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTCCCT-----------
T ss_pred             CCCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCEEEEEcCccccCCCC-----------
Confidence            99999999998644 57788999999999999999999999999999886 579999999988875532           


Q ss_pred             hhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCCC--
Q 022103          186 EELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQG--  263 (302)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~~--  263 (302)
                                                     +..+|++||++++.++++++.|++++||+|++|+||+++|++.....  
T Consensus       147 -------------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~  195 (281)
T 3m1a_A          147 -------------------------------GFSAYSATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAY  195 (281)
T ss_dssp             -------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEE
T ss_pred             -------------------------------CchHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCccccccccccccc
Confidence                                           24789999999999999999999999999999999999999965321  


Q ss_pred             --------------------------CCCHHHHHHHHHHHhhcCCCCCCCcceeec
Q 022103          264 --------------------------SHTADEAADVGARLLLLHPQQLPTAKFYIG  293 (302)
Q Consensus       264 --------------------------~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~  293 (302)
                                                ..+++++|..+++++.. +.  ..+.+++.
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~~~~~-~~--~~~~~~l~  248 (281)
T 3m1a_A          196 FSEENPAYAEKVGPTRQLVQGSDGSQPGDPAKAAAAIRLALDT-EK--TPLRLALG  248 (281)
T ss_dssp             ECCBCTTTHHHHHHHHHHHHC-----CBCHHHHHHHHHHHHHS-SS--CCSEEEES
T ss_pred             cCCcchhhHHHhHHHHHHHhhccCCCCCCHHHHHHHHHHHHhC-CC--CCeEEecC
Confidence                                      25789999999999873 32  23445544

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=100.00  E-value=4.8e-37  Score=284.93  Aligned_cols=225  Identities=16%  Similarity=0.230  Sum_probs=188.9

Q ss_pred             cCcEEEEeCCCc--hHHHHHHHHHHHcCCEEEEEecCh---------hhHHHHHHHHhhCC---CceeEEEeeCCCH--H
Q 022103           29 KETIAIVTGANK--GIGFALVKRLAELGLTVILTARDV---------ERGQRAVESLSEKG---LPVNFFQLDVSDP--S   92 (302)
Q Consensus        29 ~~k~vlItGas~--gIG~ala~~l~~~G~~V~l~~r~~---------~~~~~~~~~l~~~~---~~~~~~~~Dlt~~--~   92 (302)
                      ++|++||||+++  |||+++|++|+++|++|++.+|+.         ++++...+.+...+   ..+.++.+|+++.  +
T Consensus         1 ~~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~   80 (329)
T 3lt0_A            1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN   80 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGG
T ss_pred             CCcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchh
Confidence            479999999985  999999999999999999777665         22222222222212   2367888999988  7


Q ss_pred             ------------------HHHHHHHHHHhhCCCccEEEEcCCCC---CCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhh
Q 022103           93 ------------------SIEAFVSWFKSNFAALDILVNNAGVS---FNDIYKNTVEHAETVIRTNFYGAKLLTESLLPL  151 (302)
Q Consensus        93 ------------------~~~~~~~~~~~~~g~id~lv~~aG~~---~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~  151 (302)
                                        +++++++++.++++++|+||||||+.   ..++.+.+.++|++++++|+.++++++++++|.
T Consensus        81 ~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~  160 (329)
T 3lt0_A           81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNI  160 (329)
T ss_dssp             GCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred             hhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence                              99999999999999999999999974   236788999999999999999999999999999


Q ss_pred             hhcCCCCCcEEEecCCCcccccccCcccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccc-cchhhHHHHHH
Q 022103          152 FRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWT-DYAVSKLALNA  230 (302)
Q Consensus       152 l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Y~asK~a~~~  230 (302)
                      |+++   |+||++||..+..+.+.                                          +. +|++||+|+++
T Consensus       161 m~~~---g~Iv~isS~~~~~~~~~------------------------------------------~~~~Y~asKaal~~  195 (329)
T 3lt0_A          161 MKPQ---SSIISLTYHASQKVVPG------------------------------------------YGGGMSSAKAALES  195 (329)
T ss_dssp             EEEE---EEEEEEECGGGTSCCTT------------------------------------------CTTTHHHHHHHHHH
T ss_pred             HhhC---CeEEEEeCccccCCCCc------------------------------------------chHHHHHHHHHHHH
Confidence            9874   89999999988755322                                          23 79999999999


Q ss_pred             HHHHHHHHccC-CCcEEEEeecCcccCCCCCCC-----------------------------------------------
Q 022103          231 YTMVLAKRYEG-EGISVNSYCPGFTQTSMTQGQ-----------------------------------------------  262 (302)
Q Consensus       231 ~~~~la~e~~~-~gI~V~~v~PG~v~T~~~~~~-----------------------------------------------  262 (302)
                      |+++|+.|+++ +||+||+|+||+|+|+|.+..                                               
T Consensus       196 ~~~~la~el~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (329)
T 3lt0_A          196 DTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYENNTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFID  275 (329)
T ss_dssp             HHHHHHHHHHHHHCCEEEEEEECCCCCHHHHTCC------------------------------------------CHHH
T ss_pred             HHHHHHHHhCCccCeEEEEEecceeechhHhhhhhhcccccccccccccccccccchhhcccccchhhhhhhhcccchhH
Confidence            99999999988 899999999999999986542                                               


Q ss_pred             -------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcccC
Q 022103          263 -------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVK  299 (302)
Q Consensus       263 -------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  299 (302)
                                   +..+|+++|..+++|++ +...+++|+++.++|+...
T Consensus       276 ~~~~~~~~~~p~~r~~~peevA~~v~fL~s-~~a~~itG~~i~vdGG~~~  324 (329)
T 3lt0_A          276 YAIEYSEKYAPLRQKLLSTDIGSVASFLLS-RESRAITGQTIYVDNGLNI  324 (329)
T ss_dssp             HHHHHHHHHSSSCSCCCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHhhcCcccCcCCHHHHHHHHHHHhC-chhccccCcEEEEcCCeeE
Confidence                         12589999999999997 6788899999999998653

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=100.00  E-value=6.2e-36  Score=266.00  Aligned_cols=229  Identities=21%  Similarity=0.226  Sum_probs=199.2

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecC-hhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARD-VERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~-~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      ++++|+++||||+||||++++++|+++|++|++++|+ .+++++..+++...+.++.++.+|++|+++++++++++.+.+
T Consensus         4 ~l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (258)
T 3afn_B            4 DLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKF   83 (258)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            4789999999999999999999999999999999999 888888888887777789999999999999999999999999


Q ss_pred             CCccEEEEcCCC-CCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCC----CCCcEEEecCCCccc-ccccCcc
Q 022103          106 AALDILVNNAGV-SFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSP----SKSRILNISSRLGTL-SKVRNPN  178 (302)
Q Consensus       106 g~id~lv~~aG~-~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~----~~~~iv~vsS~~~~~-~~~~~~~  178 (302)
                      +++|+||||||. ... ++.+.+.++|+.++++|+.++++++++++|.|.++.    ..++||++||..+.. +.     
T Consensus        84 g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-----  158 (258)
T 3afn_B           84 GGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGG-----  158 (258)
T ss_dssp             SSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHCCC-----
T ss_pred             CCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccCCC-----
Confidence            999999999997 433 567889999999999999999999999999997641    128999999987754 21     


Q ss_pred             cccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCC
Q 022103          179 IKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSM  258 (302)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~  258 (302)
                                                           +++..|++||++++.+++.++.+++++||+|++|+||+++|++
T Consensus       159 -------------------------------------~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~  201 (258)
T 3afn_B          159 -------------------------------------PGAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAF  201 (258)
T ss_dssp             -------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGG
T ss_pred             -------------------------------------CCchHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCccccc
Confidence                                                 2247899999999999999999999899999999999999998


Q ss_pred             CCCC---------------CCCCHHHHHHHHHHHhhcCCCC-CCCcceeecCCccc
Q 022103          259 TQGQ---------------GSHTADEAADVGARLLLLHPQQ-LPTAKFYIGLDPFV  298 (302)
Q Consensus       259 ~~~~---------------~~~~~~~~a~~~~~l~~~~~~~-~~~G~~~~~~~~~~  298 (302)
                      ....               ...+++++|..+++++. +... +++|++|..+++..
T Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~-~~~~~~~~G~~~~v~gg~~  256 (258)
T 3afn_B          202 HADKTQDVRDRISNGIPMGRFGTAEEMAPAFLFFAS-HLASGYITGQVLDINGGQY  256 (258)
T ss_dssp             GTTCCHHHHHHHHTTCTTCSCBCGGGTHHHHHHHHC-HHHHTTCCSEEEEESTTSS
T ss_pred             ccccCHHHHHHHhccCCCCcCCCHHHHHHHHHHHhC-cchhccccCCEEeECCCcc
Confidence            6542               23679999999999986 3344 78999999988753

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=5.5e-36  Score=298.60  Aligned_cols=222  Identities=24%  Similarity=0.281  Sum_probs=189.8

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      .++++|+++||||++|||+++|+.|+++|++|++.+|.  .++++.+++.+.+.++..+.+|++  ++.+++++++.+++
T Consensus       318 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~--~~~~~~~~i~~~g~~~~~~~~Dv~--~~~~~~~~~~~~~~  393 (604)
T 2et6_A          318 VSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFK--DATKTVDEIKAAGGEAWPDQHDVA--KDSEAIIKNVIDKY  393 (604)
T ss_dssp             CCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSS--CCHHHHHHHHHTTCEEEEECCCHH--HHHHHHHHHHHHHH
T ss_pred             cccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCc--cHHHHHHHHHhcCCeEEEEEcChH--HHHHHHHHHHHHhc
Confidence            46889999999999999999999999999999999874  345666777666667778888884  55677889998999


Q ss_pred             CCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccc
Q 022103          106 AALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILE  184 (302)
Q Consensus       106 g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~  184 (302)
                      |++|+||||||+... ++.+.+.++|+.++++|+.|+++++|+++|+|+++ +.|+||++||.++..+.+.         
T Consensus       394 G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~-~~G~IVnisS~ag~~~~~~---------  463 (604)
T 2et6_A          394 GTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEK-QFGRIINITSTSGIYGNFG---------  463 (604)
T ss_dssp             SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEEECCHHHHSCCTT---------
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCCEEEEECChhhccCCCC---------
Confidence            999999999998754 67889999999999999999999999999999876 5799999999988765432         


Q ss_pred             hhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC--
Q 022103          185 DEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ--  262 (302)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~--  262 (302)
                                                       +..|++||+|+.+|+++|+.|++++|||||+|+||. .|+|....  
T Consensus       464 ---------------------------------~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~PG~-~T~m~~~~~~  509 (604)
T 2et6_A          464 ---------------------------------QANYSSSKAGILGLSKTMAIEGAKNNIKVNIVAPHA-ETAMTLSIMR  509 (604)
T ss_dssp             ---------------------------------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECC-CCCC------
T ss_pred             ---------------------------------ChhHHHHHHHHHHHHHHHHHHhCccCeEEEEEcCCC-CCccccccCc
Confidence                                             478999999999999999999999999999999995 99996542  


Q ss_pred             ----CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          263 ----GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       263 ----~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                          ...+|+++|..+++|++ +... ++|+++..+|+.
T Consensus       510 ~~~~~~~~pe~vA~~v~~L~s-~~~~-itG~~~~vdGG~  546 (604)
T 2et6_A          510 EQDKNLYHADQVAPLLVYLGT-DDVP-VTGETFEIGGGW  546 (604)
T ss_dssp             ---CCSSCGGGTHHHHHHTTS-TTCC-CCSCEEEEETTE
T ss_pred             hhhccCCCHHHHHHHHHHHhC-CccC-CCCcEEEECCCe
Confidence                22579999999999987 5566 999999998874

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=100.00  E-value=9.2e-36  Score=275.51  Aligned_cols=223  Identities=19%  Similarity=0.234  Sum_probs=192.6

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEE---------ecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHH
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILT---------ARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEA   96 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~---------~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~   96 (302)
                      +++++|++|||||++|||+++|++|+++|++|+++         +|+.++++...+++...+..   ..+|+++.+++++
T Consensus         5 ~~l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~---~~~D~~~~~~~~~   81 (319)
T 1gz6_A            5 LRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGK---AVANYDSVEAGEK   81 (319)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCE---EEEECCCGGGHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCCe---EEEeCCCHHHHHH
Confidence            46889999999999999999999999999999996         45677888888888765543   3589999999999


Q ss_pred             HHHHHHhhCCCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCccccccc
Q 022103           97 FVSWFKSNFAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVR  175 (302)
Q Consensus        97 ~~~~~~~~~g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~  175 (302)
                      +++++.+.++++|+||||||+... ++.+.+.++|+.++++|+.|+++++++++|.|+++ +.++||++||..+..+.+ 
T Consensus        82 ~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~grIV~vsS~~~~~~~~-  159 (319)
T 1gz6_A           82 LVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQ-NYGRIIMTASASGIYGNF-  159 (319)
T ss_dssp             HHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TCEEEEEECCHHHHHCCT-
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCCEEEEECChhhccCCC-
Confidence            999999999999999999998754 46788999999999999999999999999999876 569999999987765432 


Q ss_pred             CcccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCccc
Q 022103          176 NPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQ  255 (302)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~  255 (302)
                                                               ++..|++||++++.|+++|+.|++++||+||+|+||.+ 
T Consensus       160 -----------------------------------------~~~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-  197 (319)
T 1gz6_A          160 -----------------------------------------GQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-  197 (319)
T ss_dssp             -----------------------------------------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-
T ss_pred             -----------------------------------------CCHHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-
Confidence                                                     24789999999999999999999999999999999998 


Q ss_pred             CCCCCCCC------CCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          256 TSMTQGQG------SHTADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       256 T~~~~~~~------~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                      |+|.....      ..+|+++|..+++++. + ...++|++|..+|+.
T Consensus       198 t~~~~~~~~~~~~~~~~p~dvA~~~~~l~s-~-~~~~tG~~~~v~GG~  243 (319)
T 1gz6_A          198 SRMTETVMPEDLVEALKPEYVAPLVLWLCH-E-SCEENGGLFEVGAGW  243 (319)
T ss_dssp             STTTGGGSCHHHHHHSCGGGTHHHHHHHTS-T-TCCCCSCEEEEETTE
T ss_pred             cccccccCChhhhccCCHHHHHHHHHHHhC-c-hhhcCCCEEEECCCe
Confidence            88865421      2579999999999986 3 346899999887764

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=5.2e-35  Score=267.06  Aligned_cols=228  Identities=23%  Similarity=0.267  Sum_probs=197.3

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhh-----CCCceeEEEeeCCCHHHHHHHHHH
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSE-----KGLPVNFFQLDVSDPSSIEAFVSW  100 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~-----~~~~~~~~~~Dlt~~~~~~~~~~~  100 (302)
                      ..+++|+++||||+||||+++|++|+++|++|++++|+.++++...+++..     .+.++.++.+|++|.+++++++++
T Consensus        14 ~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   93 (303)
T 1yxm_A           14 GLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKS   93 (303)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHH
Confidence            458899999999999999999999999999999999999998888888865     356789999999999999999999


Q ss_pred             HHhhCCCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCccc
Q 022103          101 FKSNFAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNI  179 (302)
Q Consensus       101 ~~~~~g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~  179 (302)
                      +.+.++++|+||||||.... ++.+.+.++|++++++|+.+++++++++++.+.++ ..++||++||.. ..+.+     
T Consensus        94 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~~~iv~isS~~-~~~~~-----  166 (303)
T 1yxm_A           94 TLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKE-HGGSIVNIIVPT-KAGFP-----  166 (303)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHH-HCEEEEEECCCC-TTCCT-----
T ss_pred             HHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHh-cCCeEEEEEeec-ccCCC-----
Confidence            99999999999999997643 56778999999999999999999999999955443 368999999987 43321     


Q ss_pred             ccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCC-
Q 022103          180 KSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSM-  258 (302)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~-  258 (302)
                                                           ....|+++|+++++++++++.|+.++||+|++|+||+++|++ 
T Consensus       167 -------------------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~  209 (303)
T 1yxm_A          167 -------------------------------------LAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTA  209 (303)
T ss_dssp             -------------------------------------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGG
T ss_pred             -------------------------------------cchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchh
Confidence                                                 236799999999999999999999899999999999999994 


Q ss_pred             -CCC-----------------CCCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          259 -TQG-----------------QGSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       259 -~~~-----------------~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                       ...                 ....+|+++|..+++++. +...+++|+++..+++..
T Consensus       210 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~i~~l~~-~~~~~~~G~~~~v~gG~~  266 (303)
T 1yxm_A          210 VENYGSWGQSFFEGSFQKIPAKRIGVPEEVSSVVCFLLS-PAASFITGQSVDVDGGRS  266 (303)
T ss_dssp             GTTSGGGGGGGGTTGGGGSTTSSCBCTHHHHHHHHHHHS-GGGTTCCSCEEEESTTGG
T ss_pred             hhhccccchHHHHHHHhcCcccCCCCHHHHHHHHHHHhC-cccccCCCcEEEECCCee
Confidence             211                 013579999999999986 566789999999998753

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=7.5e-35  Score=263.39  Aligned_cols=228  Identities=21%  Similarity=0.284  Sum_probs=194.9

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCC--CceeEEEeeCCCHHHHHHHHHHHHhh
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKG--LPVNFFQLDVSDPSSIEAFVSWFKSN  104 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dlt~~~~~~~~~~~~~~~  104 (302)
                      ++++|++|||||++|||+++|+.|+++|++|++++|+.+++++..+++...+  .++.++.+|++|+++++++++++.+.
T Consensus        29 ~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  108 (279)
T 1xg5_A           29 RWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQ  108 (279)
T ss_dssp             GGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHh
Confidence            4789999999999999999999999999999999999998888888887654  46788999999999999999999999


Q ss_pred             CCCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCC-CCcEEEecCCCcccccccCcccccc
Q 022103          105 FAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPS-KSRILNISSRLGTLSKVRNPNIKSI  182 (302)
Q Consensus       105 ~g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~-~~~iv~vsS~~~~~~~~~~~~~~~~  182 (302)
                      ++++|+||||||.... ++.+.+.++|+..+++|+.+++++++.+++.|.+.+. .++||++||..+....+        
T Consensus       109 ~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~--------  180 (279)
T 1xg5_A          109 HSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLP--------  180 (279)
T ss_dssp             HCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCS--------
T ss_pred             CCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhcccCC--------
Confidence            9999999999997654 5678899999999999999999999999999988732 38999999988752111        


Q ss_pred             cchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHcc--CCCcEEEEeecCcccCCCCC
Q 022103          183 LEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYE--GEGISVNSYCPGFTQTSMTQ  260 (302)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~--~~gI~V~~v~PG~v~T~~~~  260 (302)
                                                      .+++..|+++|++++.|+++++.|++  +.||+|++|+||+++|+|..
T Consensus       181 --------------------------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~  228 (279)
T 1xg5_A          181 --------------------------------LSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAF  228 (279)
T ss_dssp             --------------------------------CGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHH
T ss_pred             --------------------------------CCCCchhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhhh
Confidence                                            12246799999999999999999997  88999999999999999831


Q ss_pred             ---------------CCCCCCHHHHHHHHHHHhhcCCCCCCCcceeecCC
Q 022103          261 ---------------GQGSHTADEAADVGARLLLLHPQQLPTAKFYIGLD  295 (302)
Q Consensus       261 ---------------~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~  295 (302)
                                     .....+|+++|..+++++. ++..+..|.+.+..+
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~dvA~~i~~l~~-~~~~~~~g~i~i~~~  277 (279)
T 1xg5_A          229 KLHDKDPEKAAATYEQMKCLKPEDVAEAVIYVLS-TPAHIQIGDIQMRPT  277 (279)
T ss_dssp             HHTTTCHHHHHHHHC---CBCHHHHHHHHHHHHH-SCTTEEEEEEEEEET
T ss_pred             hhcccChhHHhhhcccccCCCHHHHHHHHHHHhc-CCcceEeeeEEEccC
Confidence                           1134689999999999997 566667777665543

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=100.00  E-value=3.7e-35  Score=283.59  Aligned_cols=227  Identities=23%  Similarity=0.276  Sum_probs=192.1

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      ..+++|++|||||++|||+++|+.|+++|++|++++|+... +...+.+.+.  .+.++.+|++|.++++++++++.+.+
T Consensus       209 ~~l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~-~~l~~~~~~~--~~~~~~~Dvtd~~~v~~~~~~~~~~~  285 (454)
T 3u0b_A          209 KPLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAA-EDLKRVADKV--GGTALTLDVTADDAVDKITAHVTEHH  285 (454)
T ss_dssp             STTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGH-HHHHHHHHHH--TCEEEECCTTSTTHHHHHHHHHHHHS
T ss_pred             cCCCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccH-HHHHHHHHHc--CCeEEEEecCCHHHHHHHHHHHHHHc
Confidence            44689999999999999999999999999999999997532 2222222222  35689999999999999999999999


Q ss_pred             CC-ccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCccccccc
Q 022103          106 AA-LDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSIL  183 (302)
Q Consensus       106 g~-id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~  183 (302)
                      +. +|+||||||+... .+.+.+.++|+.++++|+.+++++++++.+.|.++ ..++||++||..+..+.+.        
T Consensus       286 g~~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~-~~g~iV~iSS~a~~~g~~g--------  356 (454)
T 3u0b_A          286 GGKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIG-EGGRVIGLSSMAGIAGNRG--------  356 (454)
T ss_dssp             TTCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSC-TTCEEEEECCHHHHHCCTT--------
T ss_pred             CCCceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhc-CCCEEEEEeChHhCCCCCC--------
Confidence            76 9999999998755 57889999999999999999999999999998876 5799999999988766433        


Q ss_pred             chhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCCC
Q 022103          184 EDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQG  263 (302)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~~  263 (302)
                                                        +..|++||+++++|+++++.|++++||+||+|+||+|+|+|.....
T Consensus       357 ----------------------------------~~~YaasKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~  402 (454)
T 3u0b_A          357 ----------------------------------QTNYATTKAGMIGLAEALAPVLADKGITINAVAPGFIETKMTEAIP  402 (454)
T ss_dssp             ----------------------------------CHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC-------
T ss_pred             ----------------------------------CHHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhhcc
Confidence                                              3789999999999999999999999999999999999999976531


Q ss_pred             ---------------CCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcccC
Q 022103          264 ---------------SHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVK  299 (302)
Q Consensus       264 ---------------~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  299 (302)
                                     ..+|+++|..+++|++ +...+++|+++..+|..+.
T Consensus       403 ~~~~~~~~~~~~l~r~g~pedvA~~v~fL~s-~~a~~itG~~i~vdGG~~l  452 (454)
T 3u0b_A          403 LATREVGRRLNSLFQGGQPVDVAELIAYFAS-PASNAVTGNTIRVCGQAML  452 (454)
T ss_dssp             ---CHHHHHSBTTSSCBCHHHHHHHHHHHHC-GGGTTCCSCEEEESSSBSC
T ss_pred             hhhHHHHHhhccccCCCCHHHHHHHHHHHhC-CccCCCCCcEEEECCcccc
Confidence                           2479999999999997 6788999999999998764

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=5.5e-35  Score=263.63  Aligned_cols=213  Identities=22%  Similarity=0.333  Sum_probs=190.1

Q ss_pred             cccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhh
Q 022103           25 KWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSN  104 (302)
Q Consensus        25 ~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~  104 (302)
                      ..++++|+++||||++|||+++|+.|+++|++|++++|+.+++++..+++.+.+.++.++.+|++|.++++++++++.+.
T Consensus        26 ~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  105 (272)
T 1yb1_A           26 RKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAE  105 (272)
T ss_dssp             CCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHH
Confidence            45688999999999999999999999999999999999999988888888877778999999999999999999999999


Q ss_pred             CCCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCccccccc
Q 022103          105 FAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSIL  183 (302)
Q Consensus       105 ~g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~  183 (302)
                      ++++|+||||||.... ++.+.+.+++++.+++|+.+++++++.+++.|.++ +.++||++||..+..+.+         
T Consensus       106 ~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~~~iv~isS~~~~~~~~---------  175 (272)
T 1yb1_A          106 IGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKN-NHGHIVTVASAAGHVSVP---------  175 (272)
T ss_dssp             TCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEEECCCC-CCCHH---------
T ss_pred             CCCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCEEEEEechhhcCCCC---------
Confidence            9999999999998654 56778899999999999999999999999999876 578999999998865422         


Q ss_pred             chhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHcc---CCCcEEEEeecCcccCCCCC
Q 022103          184 EDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYE---GEGISVNSYCPGFTQTSMTQ  260 (302)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~---~~gI~V~~v~PG~v~T~~~~  260 (302)
                                                       +...|++||++++.++++++.|+.   +.||+|++|+||+++|+|..
T Consensus       176 ---------------------------------~~~~Y~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~  222 (272)
T 1yb1_A          176 ---------------------------------FLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIK  222 (272)
T ss_dssp             ---------------------------------HHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTT
T ss_pred             ---------------------------------CchhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCccc
Confidence                                             136799999999999999999986   67999999999999999965


Q ss_pred             CC-----CCCCHHHHHHHHHHHhhc
Q 022103          261 GQ-----GSHTADEAADVGARLLLL  280 (302)
Q Consensus       261 ~~-----~~~~~~~~a~~~~~l~~~  280 (302)
                      ..     ...+|+++|..+++++..
T Consensus       223 ~~~~~~~~~~~~~dva~~i~~~~~~  247 (272)
T 1yb1_A          223 NPSTSLGPTLEPEEVVNRLMHGILT  247 (272)
T ss_dssp             CTHHHHCCCCCHHHHHHHHHHHHHT
T ss_pred             cccccccCCCCHHHHHHHHHHHHHc
Confidence            32     347899999999999874

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=100.00  E-value=3.8e-35  Score=271.94  Aligned_cols=191  Identities=21%  Similarity=0.282  Sum_probs=164.6

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecC-----hhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHH
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARD-----VERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWF  101 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~-----~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~  101 (302)
                      ++++|+++||||++|||+++|++|+++|++|+++.|+     .++++...+.+...+.++.++.+|++|+++++++++++
T Consensus         2 ~m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~   81 (324)
T 3u9l_A            2 VMSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQI   81 (324)
T ss_dssp             ---CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHH
Confidence            4678999999999999999999999999999988776     45666666666666778999999999999999999999


Q ss_pred             HhhCCCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccc
Q 022103          102 KSNFAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIK  180 (302)
Q Consensus       102 ~~~~g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~  180 (302)
                      .+++|++|+||||||.... ++.+.+.++|++++++|+.|+++++++++|.|+++ +.++||++||..+..+.       
T Consensus        82 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~-~~g~iV~isS~~~~~~~-------  153 (324)
T 3u9l_A           82 IGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQ-KHGLLIWISSSSSAGGT-------  153 (324)
T ss_dssp             HHHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTSCC-------
T ss_pred             HHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCEEEEEecchhccCC-------
Confidence            9999999999999998754 57889999999999999999999999999999876 57999999998876332       


Q ss_pred             cccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCC
Q 022103          181 SILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMT  259 (302)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~  259 (302)
                                                        ++++..|++||+|+++++++++.|++++||+|++|+||++.|++.
T Consensus       154 ----------------------------------~~~~~~Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~  198 (324)
T 3u9l_A          154 ----------------------------------PPYLAPYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTN  198 (324)
T ss_dssp             ----------------------------------CSSCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC-----
T ss_pred             ----------------------------------CCcchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCch
Confidence                                              233478999999999999999999999999999999999997764

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=100.00  E-value=4.3e-35  Score=263.02  Aligned_cols=226  Identities=23%  Similarity=0.252  Sum_probs=197.7

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEec-ChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhh
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTAR-DVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSN  104 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r-~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~  104 (302)
                      +.+++|+++||||+||||++++++|+++|++|++++| +.+++++..+++.+.+.++.++.+|++|+++++++++++.++
T Consensus        17 ~~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (274)
T 1ja9_A           17 KPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSH   96 (274)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999 777888888888777778999999999999999999999999


Q ss_pred             CCCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcc-cccccCcccccc
Q 022103          105 FAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGT-LSKVRNPNIKSI  182 (302)
Q Consensus       105 ~g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~-~~~~~~~~~~~~  182 (302)
                      ++.+|+||||||.... ++.+.+.++|++.+++|+.+++++++++++.|.+  . ++||++||..+. .+.+        
T Consensus        97 ~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~-~~iv~~sS~~~~~~~~~--------  165 (274)
T 1ja9_A           97 FGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRR--G-GRIILTSSIAAVMTGIP--------  165 (274)
T ss_dssp             HSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEE--E-EEEEEECCGGGTCCSCC--------
T ss_pred             cCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh--C-CEEEEEcChHhccCCCC--------
Confidence            9999999999998644 5677899999999999999999999999999873  2 899999998876 3321        


Q ss_pred             cchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCC--
Q 022103          183 LEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ--  260 (302)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~--  260 (302)
                                                        +...|++||++++.++++++.+++..||+|+.|+||.+.|++..  
T Consensus       166 ----------------------------------~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~  211 (274)
T 1ja9_A          166 ----------------------------------NHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDEN  211 (274)
T ss_dssp             ----------------------------------SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHH
T ss_pred             ----------------------------------CCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhcc
Confidence                                              23679999999999999999999989999999999999998743  


Q ss_pred             ----------CC----------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          261 ----------GQ----------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       261 ----------~~----------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                                ..                ...+++++|..+++++. ++..+++|++|..+++.
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~~-~~~~~~~G~~~~v~gG~  273 (274)
T 1ja9_A          212 SWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIGRAVSALCQ-EESEWINGQVIKLTGGG  273 (274)
T ss_dssp             GGGTSTTCCTTCCHHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTC
T ss_pred             cccccccccccCchHHHHHHHHhcCCCCCccCHHHHHHHHHHHhC-cccccccCcEEEecCCc
Confidence                      11                13589999999999986 45667899999998864

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=100.00  E-value=2.8e-36  Score=267.30  Aligned_cols=215  Identities=9%  Similarity=0.031  Sum_probs=185.9

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC-
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF-  105 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~-  105 (302)
                      ..++|+++||||++|||+++|++|+++|++|++++|+.++.+          ....++.+|++|+++++++++++.+.+ 
T Consensus         4 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~----------~~~~~~~~D~~~~~~v~~~~~~~~~~~~   73 (241)
T 1dhr_A            4 SGEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA----------SASVIVKMTDSFTEQADQVTAEVGKLLG   73 (241)
T ss_dssp             --CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS----------SEEEECCCCSCHHHHHHHHHHHHHHHHT
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc----------CCcEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            356899999999999999999999999999999999876532          135678899999999999999999998 


Q ss_pred             -CCccEEEEcCCCCCC-CC-CCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccc
Q 022103          106 -AALDILVNNAGVSFN-DI-YKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSI  182 (302)
Q Consensus       106 -g~id~lv~~aG~~~~-~~-~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~  182 (302)
                       +++|+||||||.... ++ .+.+.++|++++++|+.++++++++++|.|.+   .++||++||..+..+.+        
T Consensus        74 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~---~g~iv~isS~~~~~~~~--------  142 (241)
T 1dhr_A           74 DQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE---GGLLTLAGAKAALDGTP--------  142 (241)
T ss_dssp             TCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEECCGGGGSCCT--------
T ss_pred             CCCCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhcc---CCEEEEECCHHHccCCC--------
Confidence             799999999998654 45 67889999999999999999999999999965   38999999988865432        


Q ss_pred             cchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHcc--CCCcEEEEeecCcccCCCCC
Q 022103          183 LEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYE--GEGISVNSYCPGFTQTSMTQ  260 (302)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~--~~gI~V~~v~PG~v~T~~~~  260 (302)
                                                        ++..|++||++++.++++++.|++  ++||+||+|+||+++|+|..
T Consensus       143 ----------------------------------~~~~Y~asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~~~  188 (241)
T 1dhr_A          143 ----------------------------------GMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNR  188 (241)
T ss_dssp             ----------------------------------TBHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHH
T ss_pred             ----------------------------------CchHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCcccc
Confidence                                              247899999999999999999998  89999999999999999854


Q ss_pred             CC-------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          261 GQ-------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       261 ~~-------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                      ..       ...+++++|..+++++. +...+++|+++..+|..
T Consensus       189 ~~~~~~~~~~~~~~~~vA~~v~~l~~-~~~~~~~G~~~~v~g~~  231 (241)
T 1dhr_A          189 KSMPEADFSSWTPLEFLVETFHDWIT-GNKRPNSGSLIQVVTTD  231 (241)
T ss_dssp             HHSTTSCGGGSEEHHHHHHHHHHHHT-TTTCCCTTCEEEEEEET
T ss_pred             ccCcchhhccCCCHHHHHHHHHHHhc-CCCcCccceEEEEeCCC
Confidence            31       12578999999999997 67778999999988764

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=100.00  E-value=1e-34  Score=256.82  Aligned_cols=222  Identities=23%  Similarity=0.211  Sum_probs=189.3

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+++++..+++.    .+.++.+|++|.++++++++    .+
T Consensus         3 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~----~~   74 (244)
T 3d3w_A            3 LFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP----GIEPVCVDLGDWEATERALG----SV   74 (244)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST----TCEEEECCTTCHHHHHHHHT----TC
T ss_pred             cccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcC----CCCEEEEeCCCHHHHHHHHH----Hc
Confidence            45789999999999999999999999999999999999888776665542    35677999999999988876    56


Q ss_pred             CCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccc
Q 022103          106 AALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILE  184 (302)
Q Consensus       106 g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~  184 (302)
                      +++|+||||||.... ++.+.+.++|++.+++|+.+++++++++.+.|.+++..++||++||..+..+.+          
T Consensus        75 ~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~----------  144 (244)
T 3d3w_A           75 GPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVT----------  144 (244)
T ss_dssp             CCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCT----------
T ss_pred             CCCCEEEECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccCCC----------
Confidence            889999999997654 567789999999999999999999999999998762268999999988764422          


Q ss_pred             hhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCC---
Q 022103          185 DEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG---  261 (302)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~---  261 (302)
                                                      ++..|++||++++.++++++.|++++||+|++|+||+++|++...   
T Consensus       145 --------------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~  192 (244)
T 3d3w_A          145 --------------------------------NHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWS  192 (244)
T ss_dssp             --------------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHHSC
T ss_pred             --------------------------------CCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccccccchhhhcc
Confidence                                            247899999999999999999999899999999999999988431   


Q ss_pred             --------------CCCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          262 --------------QGSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       262 --------------~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                                    ....+++++|..+++++. +...+++|++|..+++..
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~-~~~~~~~G~~~~v~gG~~  242 (244)
T 3d3w_A          193 DPHKAKTMLNRIPLGKFAEVEHVVNAILFLLS-DRSGMTTGSTLPVEGGFW  242 (244)
T ss_dssp             STTHHHHHHHTCTTCSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGG
T ss_pred             ChHHHHHHHhhCCCCCCcCHHHHHHHHHHHcC-ccccCCCCCEEEECCCcc
Confidence                          023579999999999986 455678999999988754

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=7.6e-36  Score=263.56  Aligned_cols=215  Identities=12%  Similarity=0.064  Sum_probs=185.3

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC--
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF--  105 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~--  105 (302)
                      |++|+++||||++|||+++|++|+++|++|++++|+.++.+          ....++.+|++|.++++++++++.+.+  
T Consensus         1 m~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~----------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   70 (236)
T 1ooe_A            1 MSSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA----------DSNILVDGNKNWTEQEQSILEQTASSLQG   70 (236)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS----------SEEEECCTTSCHHHHHHHHHHHHHHHHTT
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc----------cccEEEeCCCCCHHHHHHHHHHHHHHhCC
Confidence            46899999999999999999999999999999999976532          135678899999999999999999988  


Q ss_pred             CCccEEEEcCCCCCC-CC-CCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCccccccc
Q 022103          106 AALDILVNNAGVSFN-DI-YKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSIL  183 (302)
Q Consensus       106 g~id~lv~~aG~~~~-~~-~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~  183 (302)
                      +++|+||||||.... ++ .+.+.++|++.+++|+.++++++++++|.|.+   .++||++||..+..+.+         
T Consensus        71 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv~isS~~~~~~~~---------  138 (236)
T 1ooe_A           71 SQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP---GGLLQLTGAAAAMGPTP---------  138 (236)
T ss_dssp             CCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEECCGGGGSCCT---------
T ss_pred             CCCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc---CCEEEEECchhhccCCC---------
Confidence            799999999997654 45 67889999999999999999999999999965   38999999988875432         


Q ss_pred             chhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHcc--CCCcEEEEeecCcccCCCCCC
Q 022103          184 EDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYE--GEGISVNSYCPGFTQTSMTQG  261 (302)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~--~~gI~V~~v~PG~v~T~~~~~  261 (302)
                                                       ++..|++||++++.|+++++.|++  ++||+|++|+||+++|+|...
T Consensus       139 ---------------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~  185 (236)
T 1ooe_A          139 ---------------------------------SMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRK  185 (236)
T ss_dssp             ---------------------------------TBHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHH
T ss_pred             ---------------------------------CcHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCcchhh
Confidence                                             247899999999999999999998  899999999999999998543


Q ss_pred             C-------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          262 Q-------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       262 ~-------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                      .       ...+|+++|..+++++..+...+++|+++..++..
T Consensus       186 ~~~~~~~~~~~~~~dvA~~i~~~l~s~~~~~~~G~~~~v~gg~  228 (236)
T 1ooe_A          186 WMPNADHSSWTPLSFISEHLLKWTTETSSRPSSGALLKITTEN  228 (236)
T ss_dssp             HSTTCCGGGCBCHHHHHHHHHHHHHCGGGCCCTTCEEEEEEET
T ss_pred             cCCCccccccCCHHHHHHHHHHHHcCCCcccccccEEEEecCC
Confidence            1       22579999999997764467778999999888764

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=100.00  E-value=6e-35  Score=255.84  Aligned_cols=200  Identities=26%  Similarity=0.241  Sum_probs=175.1

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      +++++|+++||||++|||+++|++|+++|++|++++|+.+                    +|++|+++++++++++    
T Consensus         2 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~--------------------~D~~~~~~v~~~~~~~----   57 (223)
T 3uce_A            2 MGSDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG--------------------LDISDEKSVYHYFETI----   57 (223)
T ss_dssp             ---CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT--------------------CCTTCHHHHHHHHHHH----
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc--------------------cCCCCHHHHHHHHHHh----
Confidence            3578999999999999999999999999999999999864                    8999999999999865    


Q ss_pred             CCccEEEEcCCCCC--CCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCccccccc
Q 022103          106 AALDILVNNAGVSF--NDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSIL  183 (302)
Q Consensus       106 g~id~lv~~aG~~~--~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~  183 (302)
                      +++|+||||||...  .++.+.+.++|++++++|+.++++++++++|.|++   .++||++||..+..+.+         
T Consensus        58 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~---~g~iv~~sS~~~~~~~~---------  125 (223)
T 3uce_A           58 GAFDHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQ---GGSITLTSGMLSRKVVA---------  125 (223)
T ss_dssp             CSEEEEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEE---EEEEEEECCGGGTSCCT---------
T ss_pred             CCCCEEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccC---CeEEEEecchhhccCCC---------
Confidence            79999999999763  36788999999999999999999999999999975   38999999988865432         


Q ss_pred             chhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCCC
Q 022103          184 EDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQG  263 (302)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~~  263 (302)
                                                       ++.+|++||++++.|+++|+.|+++  |+||+|+||+++|+|.....
T Consensus       126 ---------------------------------~~~~Y~asK~a~~~~~~~la~e~~~--i~vn~v~PG~v~t~~~~~~~  170 (223)
T 3uce_A          126 ---------------------------------NTYVKAAINAAIEATTKVLAKELAP--IRVNAISPGLTKTEAYKGMN  170 (223)
T ss_dssp             ---------------------------------TCHHHHHHHHHHHHHHHHHHHHHTT--SEEEEEEECSBCSGGGTTSC
T ss_pred             ---------------------------------CchHHHHHHHHHHHHHHHHHHhhcC--cEEEEEEeCCCcchhhhhcc
Confidence                                             2478999999999999999999977  99999999999999876542


Q ss_pred             -------------------CCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcccC
Q 022103          264 -------------------SHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVK  299 (302)
Q Consensus       264 -------------------~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  299 (302)
                                         ..+|+++|..+++++.   ..+++|+++..+|+...
T Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~---~~~~tG~~i~vdgG~~~  222 (223)
T 3uce_A          171 ADDRDAMYQRTQSHLPVGKVGEASDIAMAYLFAIQ---NSYMTGTVIDVDGGALL  222 (223)
T ss_dssp             HHHHHHHHHHHHHHSTTCSCBCHHHHHHHHHHHHH---CTTCCSCEEEESTTGGG
T ss_pred             hhhHHHHHHHHhhcCCCCCccCHHHHHHHHHHHcc---CCCCCCcEEEecCCeec
Confidence                               2579999999999986   36789999999998654

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=6.1e-35  Score=262.35  Aligned_cols=218  Identities=26%  Similarity=0.307  Sum_probs=187.6

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhC--CCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEK--GLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      +++|+++||||++|||++++++|+++|++|++++|+.+++++..+++.+.  +.++.++.+|++|+++++++++++.+.+
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   84 (267)
T 2gdz_A            5 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF   84 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHc
Confidence            57899999999999999999999999999999999998888877777653  3468899999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCC--CCCcEEEecCCCcccccccCccccccc
Q 022103          106 AALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSP--SKSRILNISSRLGTLSKVRNPNIKSIL  183 (302)
Q Consensus       106 g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~--~~~~iv~vsS~~~~~~~~~~~~~~~~~  183 (302)
                      +++|+||||||..       +.++|++.+++|+.+++.+++.++|.|.++.  ..++||++||..+..+.+         
T Consensus        85 g~id~lv~~Ag~~-------~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---------  148 (267)
T 2gdz_A           85 GRLDILVNNAGVN-------NEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVA---------  148 (267)
T ss_dssp             SCCCEEEECCCCC-------CSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCT---------
T ss_pred             CCCCEEEECCCCC-------ChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCCC---------
Confidence            9999999999974       2467899999999999999999999997752  258999999988865432         


Q ss_pred             chhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHH--HHHccCCCcEEEEeecCcccCCCCCC
Q 022103          184 EDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVL--AKRYEGEGISVNSYCPGFTQTSMTQG  261 (302)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~l--a~e~~~~gI~V~~v~PG~v~T~~~~~  261 (302)
                                                       .+..|++||++++.+++++  +.|+++.||+||+|+||+++|++...
T Consensus       149 ---------------------------------~~~~Y~~sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~  195 (267)
T 2gdz_A          149 ---------------------------------QQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILES  195 (267)
T ss_dssp             ---------------------------------TCHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHG
T ss_pred             ---------------------------------CCchHHHHHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhhc
Confidence                                             2367999999999999995  68888999999999999999987432


Q ss_pred             C-----------------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          262 Q-----------------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       262 ~-----------------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                      .                       +..+|+++|..+++++.. +  .++|+.+..+++.
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l~s~-~--~~~G~~~~v~gg~  251 (267)
T 2gdz_A          196 IEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLITLIED-D--ALNGAIMKITTSK  251 (267)
T ss_dssp             GGCHHHHGGGGGGHHHHHHHHHHHCCBCHHHHHHHHHHHHHC-T--TCSSCEEEEETTT
T ss_pred             cccccccchhhhHHHHHHHHhccccCCCHHHHHHHHHHHhcC-c--CCCCcEEEecCCC
Confidence            1                       135899999999999973 3  3899999888764

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=100.00  E-value=1.6e-35  Score=273.11  Aligned_cols=229  Identities=18%  Similarity=0.183  Sum_probs=163.8

Q ss_pred             cccccCcEEEEeCC--CchHHHHHHHHHHHcCCEEEEEecCh-----------hhHH-----------HHHHHHhhCCCc
Q 022103           25 KWWSKETIAIVTGA--NKGIGFALVKRLAELGLTVILTARDV-----------ERGQ-----------RAVESLSEKGLP   80 (302)
Q Consensus        25 ~~~~~~k~vlItGa--s~gIG~ala~~l~~~G~~V~l~~r~~-----------~~~~-----------~~~~~l~~~~~~   80 (302)
                      .+++++|++|||||  ++|||+++|++|+++|++|++++|+.           ++++           ++.+++.+.+..
T Consensus         4 ~~~l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (319)
T 2ptg_A            4 PVDLRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVD   83 (319)
T ss_dssp             CCCCTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC-------------------------------
T ss_pred             ccccCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhcccc
Confidence            35688999999999  89999999999999999999998753           1222           223333332211


Q ss_pred             ---eeEEEee------------CCC--------HHHHHHHHHHHHhhCCCccEEEEcCCCCC---CCCCCCCHHHHHHHH
Q 022103           81 ---VNFFQLD------------VSD--------PSSIEAFVSWFKSNFAALDILVNNAGVSF---NDIYKNTVEHAETVI  134 (302)
Q Consensus        81 ---~~~~~~D------------lt~--------~~~~~~~~~~~~~~~g~id~lv~~aG~~~---~~~~~~~~e~~~~~~  134 (302)
                         ..++.+|            ++|        .++++++++++.+.++++|+||||||...   .++.+.+.++|+.++
T Consensus        84 ~~~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~  163 (319)
T 2ptg_A           84 LVFDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAV  163 (319)
T ss_dssp             -CCSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHHH
T ss_pred             ccccccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHHH
Confidence               2444443            333        45899999999999999999999999752   357889999999999


Q ss_pred             HhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCC
Q 022103          135 RTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGW  214 (302)
Q Consensus       135 ~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (302)
                      ++|+.++++++++++|+|.+.   ++||++||..+..+.+.                                       
T Consensus       164 ~vN~~g~~~l~~~~~~~m~~~---g~Iv~isS~~~~~~~~~---------------------------------------  201 (319)
T 2ptg_A          164 SSSSYSFVSLLQHFLPLMKEG---GSALALSYIASEKVIPG---------------------------------------  201 (319)
T ss_dssp             HHHTHHHHHHHHHHGGGEEEE---EEEEEEEECC----------------------------------------------
T ss_pred             hHhhHHHHHHHHHHHHHHhcC---ceEEEEeccccccccCc---------------------------------------
Confidence            999999999999999999753   89999999988654321                                       


Q ss_pred             CcccccchhhHHHHHHHHHHHHHHccC-CCcEEEEeecCcccCCCCCCC-----------------------CCCCHHHH
Q 022103          215 PEIWTDYAVSKLALNAYTMVLAKRYEG-EGISVNSYCPGFTQTSMTQGQ-----------------------GSHTADEA  270 (302)
Q Consensus       215 ~~~~~~Y~asK~a~~~~~~~la~e~~~-~gI~V~~v~PG~v~T~~~~~~-----------------------~~~~~~~~  270 (302)
                        ....|++||+|+++|+++|+.|+++ +||+||+|+||+|+|+|....                       +..+|+++
T Consensus       202 --~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~peev  279 (319)
T 2ptg_A          202 --YGGGMSSAKAALESDCRTLAFEAGRARAVRVNCISAGPLKSRAASAIGKAGDKTFIDLAIDYSEANAPLQKELESDDV  279 (319)
T ss_dssp             -------------THHHHHHHHHHHHHHHCCEEEEEEECCCC-------------------------------CCCHHHH
T ss_pred             --cchhhHHHHHHHHHHHHHHHHHhccccCeeEEEEeeCCccChhhhhcccccchhhHHHHHHHHhccCCCCCCCCHHHH
Confidence              1147999999999999999999985 899999999999999985432                       12479999


Q ss_pred             HHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          271 ADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       271 a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                      |..+++|+. +...+++|+++.++|+..
T Consensus       280 A~~v~~L~s-~~~~~itG~~i~vdGG~~  306 (319)
T 2ptg_A          280 GRAALFLLS-PLARAVTGATLYVDNGLH  306 (319)
T ss_dssp             HHHHHHHTS-GGGTTCCSCEEEESTTCT
T ss_pred             HHHHHHHhC-cccCCccCCEEEECCCce
Confidence            999999997 677889999999999864

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=100.00  E-value=4.6e-35  Score=261.31  Aligned_cols=211  Identities=14%  Similarity=0.047  Sum_probs=184.4

Q ss_pred             CcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCcc
Q 022103           30 ETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALD  109 (302)
Q Consensus        30 ~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id  109 (302)
                      +|+++||||++|||+++|++|+++|++|++++|+.++.+            ...+.+|++|.++++++++++.+.++++|
T Consensus        22 ~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~------------~~~~~~d~~d~~~v~~~~~~~~~~~g~iD   89 (251)
T 3orf_A           22 SKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNA------------DHSFTIKDSGEEEIKSVIEKINSKSIKVD   89 (251)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTS------------SEEEECSCSSHHHHHHHHHHHHTTTCCEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc------------ccceEEEeCCHHHHHHHHHHHHHHcCCCC
Confidence            689999999999999999999999999999999976422            24578999999999999999999999999


Q ss_pred             EEEEcCCCCCC--CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhh
Q 022103          110 ILVNNAGVSFN--DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEE  187 (302)
Q Consensus       110 ~lv~~aG~~~~--~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~  187 (302)
                      +||||||....  .+.+.+.++|++++++|+.+++++++++++.|++   .++||++||..+..+.+             
T Consensus        90 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv~isS~~~~~~~~-------------  153 (251)
T 3orf_A           90 TFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQ---GGLFVLTGASAALNRTS-------------  153 (251)
T ss_dssp             EEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEECCGGGGSCCT-------------
T ss_pred             EEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhcc---CCEEEEEechhhccCCC-------------
Confidence            99999998654  2577889999999999999999999999999975   38999999998875532             


Q ss_pred             hcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHcc--CCCcEEEEeecCcccCCCCCCC---
Q 022103          188 LSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYE--GEGISVNSYCPGFTQTSMTQGQ---  262 (302)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~--~~gI~V~~v~PG~v~T~~~~~~---  262 (302)
                                                   ++..|++||+|++.++++++.|++  ++||+|++|+||+|+|+|....   
T Consensus       154 -----------------------------~~~~Y~~sKaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~~~~~~~~  204 (251)
T 3orf_A          154 -----------------------------GMIAYGATKAATHHIIKDLASENGGLPAGSTSLGILPVTLDTPTNRKYMSD  204 (251)
T ss_dssp             -----------------------------TBHHHHHHHHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHHHHHHCTT
T ss_pred             -----------------------------CCchhHHHHHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcchhhhccc
Confidence                                         247899999999999999999986  8899999999999999986432   


Q ss_pred             ----CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          263 ----GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       263 ----~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                          ...+|+++|..+++++..+...+++|+++...+..
T Consensus       205 ~~~~~~~~~~dva~~i~~l~~~~~~~~~tG~~i~v~~g~  243 (251)
T 3orf_A          205 ANFDDWTPLSEVAEKLFEWSTNSDSRPTNGSLVKFETKS  243 (251)
T ss_dssp             SCGGGSBCHHHHHHHHHHHHHCGGGCCCTTCEEEEEEET
T ss_pred             ccccccCCHHHHHHHHHHHhcCccccCCcceEEEEecCC
Confidence                23689999999999998437788999999876653

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=100.00  E-value=3.6e-35  Score=270.53  Aligned_cols=228  Identities=18%  Similarity=0.173  Sum_probs=183.0

Q ss_pred             ccccccCcEEEEeCC--CchHHHHHHHHHHHcCCEEEEEecChh-----------hHHHHHHHHhhCCCc---eeEEEee
Q 022103           24 TKWWSKETIAIVTGA--NKGIGFALVKRLAELGLTVILTARDVE-----------RGQRAVESLSEKGLP---VNFFQLD   87 (302)
Q Consensus        24 ~~~~~~~k~vlItGa--s~gIG~ala~~l~~~G~~V~l~~r~~~-----------~~~~~~~~l~~~~~~---~~~~~~D   87 (302)
                      +.+++++|++|||||  ++|||+++|++|+++|++|++++|+..           +++.. +++.. +..   +.++.+|
T Consensus         3 ~~~~l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~d   80 (315)
T 2o2s_A            3 FPIDLRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDED-RKLPD-GSLIEFAGVYPLD   80 (315)
T ss_dssp             -CCCCTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHH-HBCTT-SCBCCCSCEEECC
T ss_pred             CcccCCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhh-hhhhc-ccccccccccccc
Confidence            345688999999999  899999999999999999999998641           11111 22211 211   2444444


Q ss_pred             ------------CC--------CHHHHHHHHHHHHhhCCCccEEEEcCCCCC---CCCCCCCHHHHHHHHHhhhhHHHHH
Q 022103           88 ------------VS--------DPSSIEAFVSWFKSNFAALDILVNNAGVSF---NDIYKNTVEHAETVIRTNFYGAKLL  144 (302)
Q Consensus        88 ------------lt--------~~~~~~~~~~~~~~~~g~id~lv~~aG~~~---~~~~~~~~e~~~~~~~vn~~~~~~l  144 (302)
                                  ++        |+++++++++++.+++|++|+||||||...   .++.+.+.++|++++++|+.+++++
T Consensus        81 ~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l  160 (315)
T 2o2s_A           81 AAFDKPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSL  160 (315)
T ss_dssp             TTCSSTTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHH
T ss_pred             ccccccchhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHH
Confidence                        33        366899999999999999999999999753   3577899999999999999999999


Q ss_pred             HHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhh
Q 022103          145 TESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVS  224 (302)
Q Consensus       145 ~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~as  224 (302)
                      +++++|.|.+   .++||++||..+..+.+.                                         ....|++|
T Consensus       161 ~~~~~~~m~~---~g~Iv~isS~~~~~~~~~-----------------------------------------~~~~Y~as  196 (315)
T 2o2s_A          161 LQHFGPIMNE---GGSAVTLSYLAAERVVPG-----------------------------------------YGGGMSSA  196 (315)
T ss_dssp             HHHHSTTEEE---EEEEEEEEEGGGTSCCTT-----------------------------------------CCTTHHHH
T ss_pred             HHHHHHHHhc---CCEEEEEecccccccCCC-----------------------------------------ccHHHHHH
Confidence            9999999975   389999999887654321                                         11479999


Q ss_pred             HHHHHHHHHHHHHHccC-CCcEEEEeecCcccCCCCCCC-----------------------CCCCHHHHHHHHHHHhhc
Q 022103          225 KLALNAYTMVLAKRYEG-EGISVNSYCPGFTQTSMTQGQ-----------------------GSHTADEAADVGARLLLL  280 (302)
Q Consensus       225 K~a~~~~~~~la~e~~~-~gI~V~~v~PG~v~T~~~~~~-----------------------~~~~~~~~a~~~~~l~~~  280 (302)
                      |+|+++|+++|+.|+++ +||+||+|+||+|+|+|....                       +..+|+++|..+++|++ 
T Consensus       197 Kaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s-  275 (315)
T 2o2s_A          197 KAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAASAIGKSGEKSFIDYAIDYSYNNAPLRRDLHSDDVGGAALFLLS-  275 (315)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCCHHHHHTTCSSSSCHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHHTS-
T ss_pred             HHHHHHHHHHHHHHhCcccCeEEEEEecccccchhhhhccccccchhHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhC-
Confidence            99999999999999985 899999999999999873211                       23589999999999997 


Q ss_pred             CCCCCCCcceeecCCccc
Q 022103          281 HPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       281 ~~~~~~~G~~~~~~~~~~  298 (302)
                      +...+++|+++..+|+..
T Consensus       276 ~~~~~itG~~i~vdGG~~  293 (315)
T 2o2s_A          276 PLARAVSGVTLYVDNGLH  293 (315)
T ss_dssp             GGGTTCCSCEEEESTTGG
T ss_pred             chhccCcCCEEEECCCee
Confidence            677889999999999854

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=100.00  E-value=6.5e-35  Score=291.53  Aligned_cols=225  Identities=21%  Similarity=0.249  Sum_probs=180.5

Q ss_pred             cccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEec---------ChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHH
Q 022103           25 KWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTAR---------DVERGQRAVESLSEKGLPVNFFQLDVSDPSSIE   95 (302)
Q Consensus        25 ~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r---------~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~   95 (302)
                      ..+++||++|||||++|||+++|+.|+++|++|++++|         +.++++...+++...+..+   .+|+++.++++
T Consensus        14 ~~~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~---~~D~~d~~~~~   90 (613)
T 3oml_A           14 KLRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEA---VADYNSVIDGA   90 (613)
T ss_dssp             -CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCCE---EECCCCGGGHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCeE---EEEeCCHHHHH
Confidence            46789999999999999999999999999999999988         7777888888888766543   48999999999


Q ss_pred             HHHHHHHhhCCCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccc
Q 022103           96 AFVSWFKSNFAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKV  174 (302)
Q Consensus        96 ~~~~~~~~~~g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~  174 (302)
                      ++++++.+.++++|+||||||+... ++.+.+.++|+.++++|+.|+++++++++|.|+++ +.++||++||.++..+.+
T Consensus        91 ~~~~~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~-~~g~IV~isS~a~~~~~~  169 (613)
T 3oml_A           91 KVIETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQ-NYGRIIMTSSNSGIYGNF  169 (613)
T ss_dssp             HHHC----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-TCEEEEEECCHHHHHCCT
T ss_pred             HHHHHHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEECCHHHcCCCC
Confidence            9999999999999999999998754 67889999999999999999999999999999887 579999999998876543


Q ss_pred             cCcccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcc
Q 022103          175 RNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFT  254 (302)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v  254 (302)
                      .                                          +..|++||+|+++|+++|+.|++++||+||+|+||.+
T Consensus       170 ~------------------------------------------~~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~  207 (613)
T 3oml_A          170 G------------------------------------------QVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAA  207 (613)
T ss_dssp             T------------------------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC--
T ss_pred             C------------------------------------------ChHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCC
Confidence            2                                          3789999999999999999999999999999999975


Q ss_pred             cCCCCCCC------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          255 QTSMTQGQ------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       255 ~T~~~~~~------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                       |+|....      ....|+++|..+++|++ +. .+++|+++..+++..
T Consensus       208 -t~~~~~~~~~~~~~~~~pedvA~~v~~L~s-~~-~~~tG~~i~vdGG~~  254 (613)
T 3oml_A          208 -SRMTEGILPDILFNELKPKLIAPVVAYLCH-ES-CEDNGSYIESAAGWA  254 (613)
T ss_dssp             -----CCCCCHHHHTTCCGGGTHHHHHHTTS-TT-CCCCSCEEEEETTEE
T ss_pred             -ChhhhhccchhhhhcCCHHHHHHHHHHhcC-CC-cCCCceEEEECCCeE
Confidence             6666543      23689999999999997 44 789999999988753

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=100.00  E-value=3.4e-34  Score=253.19  Aligned_cols=222  Identities=20%  Similarity=0.174  Sum_probs=189.2

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      .++++|+++||||+||||++++++|+++|++|++++|+.+++++..+++    ..+.++.+|++|+++++++++    .+
T Consensus         3 ~~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~----~~   74 (244)
T 1cyd_A            3 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC----PGIEPVCVDLGDWDATEKALG----GI   74 (244)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS----TTCEEEECCTTCHHHHHHHHT----TC
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc----cCCCcEEecCCCHHHHHHHHH----Hc
Confidence            4578999999999999999999999999999999999988777665543    245677999999999988877    56


Q ss_pred             CCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccc
Q 022103          106 AALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILE  184 (302)
Q Consensus       106 g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~  184 (302)
                      +++|+||||||.... ++.+.+.++|++.+++|+.+++++++++++.|.+++..++||++||..+..+.+          
T Consensus        75 ~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~----------  144 (244)
T 1cyd_A           75 GPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFP----------  144 (244)
T ss_dssp             CCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCT----------
T ss_pred             CCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCCC----------
Confidence            889999999997654 567889999999999999999999999999998762268999999988764422          


Q ss_pred             hhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCC---
Q 022103          185 DEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG---  261 (302)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~---  261 (302)
                                                      ....|++||++++.++++++.+++++||+|++|+||.+.|++...   
T Consensus       145 --------------------------------~~~~Y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~  192 (244)
T 1cyd_A          145 --------------------------------NLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSA  192 (244)
T ss_dssp             --------------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTC
T ss_pred             --------------------------------CcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcccccccc
Confidence                                            236799999999999999999999899999999999999987431   


Q ss_pred             --------------CCCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          262 --------------QGSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       262 --------------~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                                    .....++++|..+++++. ++..+++|+++..++...
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~-~~~~~~~G~~~~v~gG~~  242 (244)
T 1cyd_A          193 DPEFARKLKERHPLRKFAEVEDVVNSILFLLS-DRSASTSGGGILVDAGYL  242 (244)
T ss_dssp             CHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHS-GGGTTCCSSEEEESTTGG
T ss_pred             CHHHHHHHHhcCCccCCCCHHHHHHHHHHHhC-chhhcccCCEEEECCCcc
Confidence                          123689999999999987 566678999999988754

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=100.00  E-value=3.6e-34  Score=259.96  Aligned_cols=212  Identities=25%  Similarity=0.342  Sum_probs=185.6

Q ss_pred             cccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCC-ceeEEEeeCCCHHHHHHHHHHHHh
Q 022103           25 KWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGL-PVNFFQLDVSDPSSIEAFVSWFKS  103 (302)
Q Consensus        25 ~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dlt~~~~~~~~~~~~~~  103 (302)
                      ...+++|+++||||+||||+++++.|+++|++|++++|+.++++...+++.+.+. ++.++.+|++|.++++++++++.+
T Consensus        23 ~~~~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~  102 (286)
T 1xu9_A           23 PEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGK  102 (286)
T ss_dssp             GGGGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             hhhcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHH
Confidence            3458899999999999999999999999999999999999998888888766553 688999999999999999999999


Q ss_pred             hCCCccEEEEc-CCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccc
Q 022103          104 NFAALDILVNN-AGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSI  182 (302)
Q Consensus       104 ~~g~id~lv~~-aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~  182 (302)
                      .++++|+|||| +|....++.+.+.++++.++++|+.++++++++++|.|.+.  .++||++||..+..+.+        
T Consensus       103 ~~g~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~--~g~iv~isS~~~~~~~~--------  172 (286)
T 1xu9_A          103 LMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS--NGSIVVVSSLAGKVAYP--------  172 (286)
T ss_dssp             HHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEEEGGGTSCCT--------
T ss_pred             HcCCCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHC--CCEEEEECCcccccCCC--------
Confidence            99999999999 67665555667899999999999999999999999998764  58999999988765432        


Q ss_pred             cchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHc--cCCCcEEEEeecCcccCCCCC
Q 022103          183 LEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRY--EGEGISVNSYCPGFTQTSMTQ  260 (302)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~--~~~gI~V~~v~PG~v~T~~~~  260 (302)
                                                        ++..|++||++++.++++++.|+  ...||+|++|+||+++|++..
T Consensus       173 ----------------------------------~~~~Y~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~~~  218 (286)
T 1xu9_A          173 ----------------------------------MVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAM  218 (286)
T ss_dssp             ----------------------------------TCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHH
T ss_pred             ----------------------------------CccHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChhHH
Confidence                                              24789999999999999999998  578999999999999999853


Q ss_pred             C-------CCCCCHHHHHHHHHHHhhc
Q 022103          261 G-------QGSHTADEAADVGARLLLL  280 (302)
Q Consensus       261 ~-------~~~~~~~~~a~~~~~l~~~  280 (302)
                      .       ....+|+++|..++..+..
T Consensus       219 ~~~~~~~~~~~~~~~~vA~~i~~~~~~  245 (286)
T 1xu9_A          219 KAVSGIVHMQAAPKEECALEIIKGGAL  245 (286)
T ss_dssp             HHSCGGGGGGCBCHHHHHHHHHHHHHT
T ss_pred             HhccccccCCCCCHHHHHHHHHHHHhc
Confidence            2       2346899999999988763

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=2.4e-34  Score=256.51  Aligned_cols=217  Identities=23%  Similarity=0.219  Sum_probs=181.9

Q ss_pred             cccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhh
Q 022103           25 KWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSN  104 (302)
Q Consensus        25 ~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~  104 (302)
                      ...+++|+++||||++|||+++|++|+++|++|++++|+.+..+    ++   + .+.++ +|+  .++++++++++   
T Consensus        14 ~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~----~~---~-~~~~~-~D~--~~~~~~~~~~~---   79 (249)
T 1o5i_A           14 ELGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLK----RS---G-HRYVV-CDL--RKDLDLLFEKV---   79 (249)
T ss_dssp             --CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH----HT---C-SEEEE-CCT--TTCHHHHHHHS---
T ss_pred             HhccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHH----hh---C-CeEEE-eeH--HHHHHHHHHHh---
Confidence            44588999999999999999999999999999999999974322    22   2 56677 999  55677777765   


Q ss_pred             CCCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCccccccc
Q 022103          105 FAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSIL  183 (302)
Q Consensus       105 ~g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~  183 (302)
                       .++|+||||||.... ++.+.+.++|++++++|+.++++++++++|.|.++ +.++||++||..+..+.+         
T Consensus        80 -~~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~~---------  148 (249)
T 1o5i_A           80 -KEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEK-GWGRIVAITSFSVISPIE---------  148 (249)
T ss_dssp             -CCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTSCCT---------
T ss_pred             -cCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEEEEcchHhcCCCC---------
Confidence             379999999997654 56788999999999999999999999999999876 568999999988765432         


Q ss_pred             chhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCC--
Q 022103          184 EDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG--  261 (302)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~--  261 (302)
                                                       ++..|++||++++.++++++.|++++||+|++|+||+++|++...  
T Consensus       149 ---------------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~  195 (249)
T 1o5i_A          149 ---------------------------------NLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELL  195 (249)
T ss_dssp             ---------------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHS
T ss_pred             ---------------------------------CCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCcccccc
Confidence                                             247899999999999999999999999999999999999998531  


Q ss_pred             --------------CCCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcccCC
Q 022103          262 --------------QGSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVKS  300 (302)
Q Consensus       262 --------------~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~  300 (302)
                                    ....+|+++|..+++++. +...+++|+++..+|+....
T Consensus       196 ~~~~~~~~~~~~p~~~~~~~~dvA~~i~~l~s-~~~~~~tG~~~~vdgG~~~~  247 (249)
T 1o5i_A          196 SEEKKKQVESQIPMRRMAKPEEIASVVAFLCS-EKASYLTGQTIVVDGGLSKF  247 (249)
T ss_dssp             CHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTCCCC
T ss_pred             hhhHHHHHHhcCCCCCCcCHHHHHHHHHHHcC-ccccCCCCCEEEECCCcccC
Confidence                          123589999999999987 56678999999999986543

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=100.00  E-value=5e-35  Score=271.38  Aligned_cols=218  Identities=22%  Similarity=0.223  Sum_probs=176.9

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHh------hCCCceeEEEeeCCCHHHHHHHHHHHH
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLS------EKGLPVNFFQLDVSDPSSIEAFVSWFK  102 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~------~~~~~~~~~~~Dlt~~~~~~~~~~~~~  102 (302)
                      ++|+++||||++|||+++|++|+++|++|++++|+.++++...+.+.      ..+.++.++.+|++|.++++++++++.
T Consensus         1 ~~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   80 (327)
T 1jtv_A            1 ARTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVT   80 (327)
T ss_dssp             CCEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHh
Confidence            47899999999999999999999999999888886554443333332      123578999999999999999999883


Q ss_pred             hhCCCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCccccc
Q 022103          103 SNFAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKS  181 (302)
Q Consensus       103 ~~~g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~  181 (302)
                        ++++|+||||||.... ++.+.+.++|++++++|+.++++++++++|.|.++ ..++||++||..+..+.+       
T Consensus        81 --~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~-~~g~IV~isS~~~~~~~~-------  150 (327)
T 1jtv_A           81 --EGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRR-GSGRVLVTGSVGGLMGLP-------  150 (327)
T ss_dssp             --TSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEEEGGGTSCCT-------
T ss_pred             --cCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCEEEEECCcccccCCC-------
Confidence              5899999999997643 56788999999999999999999999999999876 579999999998875532       


Q ss_pred             ccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCC
Q 022103          182 ILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG  261 (302)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~  261 (302)
                                                         ....|++||++++.|+++|+.|++++||+|++|+||+|+|+|...
T Consensus       151 -----------------------------------~~~~Y~aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~~~~  195 (327)
T 1jtv_A          151 -----------------------------------FNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEK  195 (327)
T ss_dssp             -----------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-----
T ss_pred             -----------------------------------CChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChHHhh
Confidence                                               236799999999999999999999999999999999999999764


Q ss_pred             CC--------------------------------CCCHHHHHHHHHHHhhcC--CCCCCCccee
Q 022103          262 QG--------------------------------SHTADEAADVGARLLLLH--PQQLPTAKFY  291 (302)
Q Consensus       262 ~~--------------------------------~~~~~~~a~~~~~l~~~~--~~~~~~G~~~  291 (302)
                      ..                                ..+|+++|..+++++..+  ...+++|..+
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~i~~l~~~~~~~~~~~tg~~~  259 (327)
T 1jtv_A          196 VLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNPEEVAEVFLTALRAPKPTLRYFTTERF  259 (327)
T ss_dssp             --CCHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHCBCHHHHHHHHHHHHHCSSCCSEEESCSTT
T ss_pred             hhhcchhhhccCCHHHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHcCCCCCeEEEeCchH
Confidence            21                                147999999999998742  2345666543

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=100.00  E-value=9.1e-35  Score=259.20  Aligned_cols=215  Identities=22%  Similarity=0.251  Sum_probs=180.2

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCE-EEEEecChhhHHHHHHHHhhC--CCceeEEEeeCCCH-HHHHHHHHHHH
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLT-VILTARDVERGQRAVESLSEK--GLPVNFFQLDVSDP-SSIEAFVSWFK  102 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~-V~l~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dlt~~-~~~~~~~~~~~  102 (302)
                      ++++|+++||||++|||+++|++|+++|++ |++++|+.+.  +..+++.+.  +.++.++.+|++|. ++++++++++.
T Consensus         2 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~--~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   79 (254)
T 1sby_A            2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENP--TALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIF   79 (254)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCH--HHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHH
T ss_pred             CCCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchH--HHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHH
Confidence            478999999999999999999999999996 9999998632  122222221  45788999999998 99999999999


Q ss_pred             hhCCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCC--CCCcEEEecCCCcccccccCcccc
Q 022103          103 SNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSP--SKSRILNISSRLGTLSKVRNPNIK  180 (302)
Q Consensus       103 ~~~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~--~~~~iv~vsS~~~~~~~~~~~~~~  180 (302)
                      +.++++|+||||||..       +.++|++.+++|+.++++++++++|.|.++.  ..++||++||..+..+.+      
T Consensus        80 ~~~g~id~lv~~Ag~~-------~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------  146 (254)
T 1sby_A           80 DQLKTVDILINGAGIL-------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIH------  146 (254)
T ss_dssp             HHHSCCCEEEECCCCC-------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCT------
T ss_pred             HhcCCCCEEEECCccC-------CHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCCC------
Confidence            9999999999999983       4577999999999999999999999997652  158999999988865432      


Q ss_pred             cccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCC
Q 022103          181 SILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ  260 (302)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~  260 (302)
                                                          ++..|++||++++.++++++.++.++||+|++|+||+++|+|..
T Consensus       147 ------------------------------------~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~  190 (254)
T 1sby_A          147 ------------------------------------QVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVH  190 (254)
T ss_dssp             ------------------------------------TSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHH
T ss_pred             ------------------------------------CchHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCcccc
Confidence                                                24689999999999999999998878999999999999999854


Q ss_pred             CC-----------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCc
Q 022103          261 GQ-----------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDP  296 (302)
Q Consensus       261 ~~-----------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  296 (302)
                      ..                 ...+|+++|..+++++.    ...+|++|..+|+
T Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~i~~~~~----~~~~G~~~~v~gG  239 (254)
T 1sby_A          191 TFNSWLDVEPRVAELLLSHPTQTSEQCGQNFVKAIE----ANKNGAIWKLDLG  239 (254)
T ss_dssp             SCCCGGGSCTTHHHHHTTSCCEEHHHHHHHHHHHHH----HCCTTCEEEEETT
T ss_pred             ccchhhhhhHHHHHHHhcCCCCCHHHHHHHHHHHHH----cCCCCCEEEEeCC
Confidence            32                 11368999999999875    2478999998876

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=100.00  E-value=9.1e-34  Score=258.62  Aligned_cols=227  Identities=19%  Similarity=0.192  Sum_probs=182.3

Q ss_pred             cccccCcEEEEeCCC--chHHHHHHHHHHHcCCEEEEEecChhh-----------HHHHHHHHhhCCC--c-eeEEEee-
Q 022103           25 KWWSKETIAIVTGAN--KGIGFALVKRLAELGLTVILTARDVER-----------GQRAVESLSEKGL--P-VNFFQLD-   87 (302)
Q Consensus        25 ~~~~~~k~vlItGas--~gIG~ala~~l~~~G~~V~l~~r~~~~-----------~~~~~~~l~~~~~--~-~~~~~~D-   87 (302)
                      .+++++|++|||||+  +|||+++|++|+++|++|++++|+...           +++. +++.. +.  . ...+.+| 
T Consensus         3 ~~~l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~   80 (297)
T 1d7o_A            3 PIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQS-RVLPD-GSLMEIKKVYPLDA   80 (297)
T ss_dssp             CCCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGG-GBCTT-SSBCCEEEEEEECT
T ss_pred             ccccCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhh-hhhcc-ccccccccccccce
Confidence            356889999999999  999999999999999999999876421           1111 11111 11  1 2334443 


Q ss_pred             -------CC----C--------HHHHHHHHHHHHhhCCCccEEEEcCCCCC---CCCCCCCHHHHHHHHHhhhhHHHHHH
Q 022103           88 -------VS----D--------PSSIEAFVSWFKSNFAALDILVNNAGVSF---NDIYKNTVEHAETVIRTNFYGAKLLT  145 (302)
Q Consensus        88 -------lt----~--------~~~~~~~~~~~~~~~g~id~lv~~aG~~~---~~~~~~~~e~~~~~~~vn~~~~~~l~  145 (302)
                             ++    |        +++++++++++.++++++|+||||||...   .++.+.+.++|++++++|+.++++++
T Consensus        81 ~~~~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~  160 (297)
T 1d7o_A           81 VFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLL  160 (297)
T ss_dssp             TCCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred             eccchhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHH
Confidence                   32    2        66899999999999999999999999653   35678899999999999999999999


Q ss_pred             HHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhH
Q 022103          146 ESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSK  225 (302)
Q Consensus       146 ~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK  225 (302)
                      ++++|.|.+   .++||++||..+..+.+.                                         ....|++||
T Consensus       161 ~~~~~~m~~---~g~iv~isS~~~~~~~~~-----------------------------------------~~~~Y~asK  196 (297)
T 1d7o_A          161 SHFLPIMNP---GGASISLTYIASERIIPG-----------------------------------------YGGGMSSAK  196 (297)
T ss_dssp             HHHGGGEEE---EEEEEEEECGGGTSCCTT-----------------------------------------CTTTHHHHH
T ss_pred             HHHHHHhcc---CceEEEEeccccccCCCC-----------------------------------------cchHHHHHH
Confidence            999999975   389999999887654321                                         114799999


Q ss_pred             HHHHHHHHHHHHHccC-CCcEEEEeecCcccCCCCCCC-----------------CCCCHHHHHHHHHHHhhcCCCCCCC
Q 022103          226 LALNAYTMVLAKRYEG-EGISVNSYCPGFTQTSMTQGQ-----------------GSHTADEAADVGARLLLLHPQQLPT  287 (302)
Q Consensus       226 ~a~~~~~~~la~e~~~-~gI~V~~v~PG~v~T~~~~~~-----------------~~~~~~~~a~~~~~l~~~~~~~~~~  287 (302)
                      +|+++|+++|+.|+++ +||+||+|+||+|+|+|....                 ...+|+++|..+++|+. +...+++
T Consensus       197 aa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~l~s-~~~~~it  275 (297)
T 1d7o_A          197 AALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFIDTMIEYSYNNAPIQKTLTADEVGNAAAFLVS-PLASAIT  275 (297)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSHHHHHHHHHHHHSSSCCCBCHHHHHHHHHHHTS-GGGTTCC
T ss_pred             HHHHHHHHHHHHHhCcccCcEEEEEeccccccchhhhccccHHHHHHhhccCCCCCCCCHHHHHHHHHHHhC-ccccCCC
Confidence            9999999999999985 899999999999999997642                 13589999999999987 5677899


Q ss_pred             cceeecCCccc
Q 022103          288 AKFYIGLDPFV  298 (302)
Q Consensus       288 G~~~~~~~~~~  298 (302)
                      |+++..+++..
T Consensus       276 G~~i~vdgG~~  286 (297)
T 1d7o_A          276 GATIYVDNGLN  286 (297)
T ss_dssp             SCEEEESTTGG
T ss_pred             CCEEEECCCce
Confidence            99999998853

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=100.00  E-value=9.6e-35  Score=257.88  Aligned_cols=205  Identities=27%  Similarity=0.240  Sum_probs=154.1

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      ++++|++|||||++|||+++|++|++ |++|++++|+.++++...+     ..++.++.+|+++.++ .+.+.+..+.++
T Consensus         2 ~l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~-~~~~~~~~~~~~   74 (245)
T 3e9n_A            2 SLKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAE-----IEGVEPIESDIVKEVL-EEGGVDKLKNLD   74 (245)
T ss_dssp             ----CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHT-----STTEEEEECCHHHHHH-TSSSCGGGTTCS
T ss_pred             CCCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHh-----hcCCcceecccchHHH-HHHHHHHHHhcC
Confidence            57899999999999999999999997 9999999999887765544     2368899999998877 445555556778


Q ss_pred             CccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccch
Q 022103          107 ALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILED  185 (302)
Q Consensus       107 ~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~  185 (302)
                      ++|+||||||.... ++.+.+.++|+.++++|+.++++++++++|.|+++  .++||++||..+..+.+           
T Consensus        75 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~--~g~iv~isS~~~~~~~~-----------  141 (245)
T 3e9n_A           75 HVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAA--SGCVIYINSGAGNGPHP-----------  141 (245)
T ss_dssp             CCSEEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEC--------------------
T ss_pred             CCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc--CCeEEEEcCcccccCCC-----------
Confidence            99999999998754 56778999999999999999999999999999876  49999999998875532           


Q ss_pred             hhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCCC--
Q 022103          186 EELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQG--  263 (302)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~~--  263 (302)
                                                     ++..|++||+|++.|+++|+.|++++||+|++|+||+|+|+|.+...  
T Consensus       142 -------------------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~  190 (245)
T 3e9n_A          142 -------------------------------GNTIYAASKHALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQGLMDS  190 (245)
T ss_dssp             --------------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-----------
T ss_pred             -------------------------------CchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCccCchhhhhhhh
Confidence                                           23789999999999999999999999999999999999999976542  


Q ss_pred             ---------CCCHHHHHHHHHHHhhcCC
Q 022103          264 ---------SHTADEAADVGARLLLLHP  282 (302)
Q Consensus       264 ---------~~~~~~~a~~~~~l~~~~~  282 (302)
                               ..+|+++|..+++++..+.
T Consensus       191 ~~~~~~~~~~~~p~dvA~~i~~l~~~~~  218 (245)
T 3e9n_A          191 QGTNFRPEIYIEPKEIANAIRFVIDAGE  218 (245)
T ss_dssp             -----CCGGGSCHHHHHHHHHHHHTSCT
T ss_pred             hhcccccccCCCHHHHHHHHHHHHcCCC
Confidence                     2689999999999997443

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=100.00  E-value=3.9e-34  Score=271.48  Aligned_cols=210  Identities=14%  Similarity=0.059  Sum_probs=177.1

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHH-cCCEEEEEecChhhHH------------HHHHHHhhCCCceeEEEeeCCCHHHH
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAE-LGLTVILTARDVERGQ------------RAVESLSEKGLPVNFFQLDVSDPSSI   94 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~-~G~~V~l~~r~~~~~~------------~~~~~l~~~~~~~~~~~~Dlt~~~~~   94 (302)
                      ..+|++|||||++|||+++|+.|++ +|++|++++|+.+..+            ...+++.+.+.++..+.+|++|++++
T Consensus        59 ~~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~~v  138 (422)
T 3s8m_A           59 DGPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAAR  138 (422)
T ss_dssp             SSCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHH
T ss_pred             cCCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHHHH
Confidence            3589999999999999999999999 9999999999865432            23456667788899999999999999


Q ss_pred             HHHHHHHHhhC-CCccEEEEcCCCC-------------C-CCC---------------------CCCCHHHHHHHHHhhh
Q 022103           95 EAFVSWFKSNF-AALDILVNNAGVS-------------F-NDI---------------------YKNTVEHAETVIRTNF  138 (302)
Q Consensus        95 ~~~~~~~~~~~-g~id~lv~~aG~~-------------~-~~~---------------------~~~~~e~~~~~~~vn~  138 (302)
                      +++++++.++| |++|+||||||..             . .++                     .+.+.++|+.++++|.
T Consensus       139 ~~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~Vn~  218 (422)
T 3s8m_A          139 AQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVMG  218 (422)
T ss_dssp             HHHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHhhc
Confidence            99999999999 9999999999872             1 122                     3579999999999999


Q ss_pred             hHHH-HHHHHHhhh-hhcCCCCCcEEEecCCCcccccccCcccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCc
Q 022103          139 YGAK-LLTESLLPL-FRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPE  216 (302)
Q Consensus       139 ~~~~-~l~~~~~~~-l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (302)
                      .+.+ ++++++.+. |.+  +.|+||++||+.+..+.+..                                        
T Consensus       219 ~~~~~~~~~a~~~~~m~~--~gG~IVniSSi~g~~~~p~~----------------------------------------  256 (422)
T 3s8m_A          219 GQDWELWIDALEGAGVLA--DGARSVAFSYIGTEITWPIY----------------------------------------  256 (422)
T ss_dssp             SHHHHHHHHHHHHTTCEE--EEEEEEEEEECCCGGGHHHH----------------------------------------
T ss_pred             hhHHHHHHHHHHHHHHhh--CCCEEEEEeCchhhccCCCc----------------------------------------
Confidence            9987 788887654 443  35899999999987553210                                        


Q ss_pred             ccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCCC---------------CCCHHHHHHHHHHHhh
Q 022103          217 IWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQG---------------SHTADEAADVGARLLL  279 (302)
Q Consensus       217 ~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~~---------------~~~~~~~a~~~~~l~~  279 (302)
                      ...+|++||+|+++|+++||.|++++|||||+|+||+|.|+|.....               ...||+++..+.+|++
T Consensus       257 ~~~aY~ASKaAl~~lTrsLA~Ela~~GIRVNaVaPG~i~T~~~~~ip~~~~~~~~~~~~m~r~G~pEdva~~v~~L~s  334 (422)
T 3s8m_A          257 WHGALGKAKVDLDRTAQRLNARLAKHGGGANVAVLKSVVTQASAAIPVMPLYISMVYKIMKEKGLHEGTIEQLDRLFR  334 (422)
T ss_dssp             TSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHH
T ss_pred             cchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEcCCCcChhhhcCCCChHHHHHHHhhhcCCcChHHHHHHHHHHhc
Confidence            01679999999999999999999999999999999999999987542               2578999999999987

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=100.00  E-value=2.1e-33  Score=264.49  Aligned_cols=211  Identities=11%  Similarity=0.027  Sum_probs=178.0

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHH-cCCEEEEEecChhhH------------HHHHHHHhhCCCceeEEEeeCCCHHH
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAE-LGLTVILTARDVERG------------QRAVESLSEKGLPVNFFQLDVSDPSS   93 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~-~G~~V~l~~r~~~~~------------~~~~~~l~~~~~~~~~~~~Dlt~~~~   93 (302)
                      ...+|++|||||++|||+++|+.|++ +|++|++++|+.+..            +...+++.+.+.++..+.+|++|+++
T Consensus        44 ~~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~~~  123 (405)
T 3zu3_A           44 ANGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEI  123 (405)
T ss_dssp             TTCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHH
T ss_pred             CCCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCHHH
Confidence            46689999999999999999999999 999999999876542            22344566667788999999999999


Q ss_pred             HHHHHHHHHhhCCCccEEEEcCCCC--------------CCCC---------------------CCCCHHHHHHHHHhhh
Q 022103           94 IEAFVSWFKSNFAALDILVNNAGVS--------------FNDI---------------------YKNTVEHAETVIRTNF  138 (302)
Q Consensus        94 ~~~~~~~~~~~~g~id~lv~~aG~~--------------~~~~---------------------~~~~~e~~~~~~~vn~  138 (302)
                      ++++++++.++||++|+||||||..              ..++                     .+.+.++|++++++|.
T Consensus       124 v~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~Vn~  203 (405)
T 3zu3_A          124 KQLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVMG  203 (405)
T ss_dssp             HHHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHhhc
Confidence            9999999999999999999999974              1233                     6789999999999999


Q ss_pred             hHHH-HHHHHHhh-hhhcCCCCCcEEEecCCCcccccccCcccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCc
Q 022103          139 YGAK-LLTESLLP-LFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPE  216 (302)
Q Consensus       139 ~~~~-~l~~~~~~-~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (302)
                      .+.+ ++++++.+ .|.+  +.|+||++||+.+..+.+..                                        
T Consensus       204 ~~~~~~~~~~~~~~~m~~--~gG~IVniSSi~~~~~~p~~----------------------------------------  241 (405)
T 3zu3_A          204 GEDWQMWIDALLDAGVLA--EGAQTTAFTYLGEKITHDIY----------------------------------------  241 (405)
T ss_dssp             SHHHHHHHHHHHHHTCEE--EEEEEEEEECCCCGGGTTTT----------------------------------------
T ss_pred             hhHHHHHHHHHHHHhhhh--CCcEEEEEeCchhhCcCCCc----------------------------------------
Confidence            9998 78888765 4543  35899999999987553210                                        


Q ss_pred             ccccchhhHHHHHHHHHHHHHHccCC-CcEEEEeecCcccCCCCCCCCC---------------CCHHHHHHHHHHHhh
Q 022103          217 IWTDYAVSKLALNAYTMVLAKRYEGE-GISVNSYCPGFTQTSMTQGQGS---------------HTADEAADVGARLLL  279 (302)
Q Consensus       217 ~~~~Y~asK~a~~~~~~~la~e~~~~-gI~V~~v~PG~v~T~~~~~~~~---------------~~~~~~a~~~~~l~~  279 (302)
                      +..+|++||+++++++++||.|++++ |||||+|+||.|.|+|......               ..+|+++..+.+|++
T Consensus       242 ~~~aY~AaKaal~~ltrsLA~Ela~~~GIRVNaVaPG~i~T~~s~~ip~~p~y~~~l~~~mkr~G~~Ed~a~~i~~L~s  320 (405)
T 3zu3_A          242 WNGSIGAAKKDLDQKVLAIRESLAAHGGGDARVSVLKAVVSQASSAIPMMPLYLSLLFKVMKEKGTHEGCIEQVYSLYK  320 (405)
T ss_dssp             TTSHHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEECCCCCCHHHHTSTTHHHHHHHHHHHHHHHTCCCCHHHHHHHHHH
T ss_pred             cchHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEEeCCCcCchhhcCCCCcHHHHHHHHHHhcCCCcHHHHHHHHHHHh
Confidence            01789999999999999999999999 9999999999999999765522               678999999999986

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=1.3e-32  Score=242.34  Aligned_cols=211  Identities=24%  Similarity=0.267  Sum_probs=179.6

Q ss_pred             CcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCcc
Q 022103           30 ETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALD  109 (302)
Q Consensus        30 ~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id  109 (302)
                      +|+++||||++|||++++++|+++|++|++++|+.+ .           ..+.++.+|++|+++++++++++ ++++++|
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~-----------~~~~~~~~D~~~~~~~~~~~~~~-~~~~~~d   68 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-G-----------EDLIYVEGDVTREEDVRRAVARA-QEEAPLF   68 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-S-----------SSSEEEECCTTCHHHHHHHHHHH-HHHSCEE
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-c-----------cceEEEeCCCCCHHHHHHHHHHH-HhhCCce
Confidence            689999999999999999999999999999999864 1           24588999999999999999999 7789999


Q ss_pred             EEEEcCCCCCC-CCCCCC----HHHHHHHHHhhhhHHHHHHHHHhhhhhcCC-----CCCcEEEecCCCcccccccCccc
Q 022103          110 ILVNNAGVSFN-DIYKNT----VEHAETVIRTNFYGAKLLTESLLPLFRRSP-----SKSRILNISSRLGTLSKVRNPNI  179 (302)
Q Consensus       110 ~lv~~aG~~~~-~~~~~~----~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~-----~~~~iv~vsS~~~~~~~~~~~~~  179 (302)
                      ++|||||.... ++.+.+    .+++++.+++|+.+++++++++++.|.+++     ..++||++||..+..+.+     
T Consensus        69 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-----  143 (242)
T 1uay_A           69 AVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQI-----  143 (242)
T ss_dssp             EEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCT-----
T ss_pred             EEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCC-----
Confidence            99999997643 334433    459999999999999999999999998752     124999999988764422     


Q ss_pred             ccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCC
Q 022103          180 KSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMT  259 (302)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~  259 (302)
                                                           ++..|++||++++.++++++.|++++||+|++|+||+++|++.
T Consensus       144 -------------------------------------~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~  186 (242)
T 1uay_A          144 -------------------------------------GQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLL  186 (242)
T ss_dssp             -------------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHH
T ss_pred             -------------------------------------CCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhh
Confidence                                                 2377999999999999999999998999999999999999874


Q ss_pred             CCC----------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          260 QGQ----------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       260 ~~~----------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                      ...                ...+++++|..+++++. +  ..++|++|..+++..
T Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~-~--~~~~G~~~~v~gG~~  238 (242)
T 1uay_A          187 QGLPEKAKASLAAQVPFPPRLGRPEEYAALVLHILE-N--PMLNGEVVRLDGALR  238 (242)
T ss_dssp             HTSCHHHHHHHHTTCCSSCSCCCHHHHHHHHHHHHH-C--TTCCSCEEEESTTCC
T ss_pred             hccchhHHHHHHhhCCCcccCCCHHHHHHHHHHHhc-C--CCCCCcEEEEcCCee
Confidence            321                23589999999999987 3  668999999988754

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=100.00  E-value=4.3e-33  Score=248.19  Aligned_cols=229  Identities=20%  Similarity=0.212  Sum_probs=167.8

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCccE
Q 022103           31 TIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDI  110 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id~  110 (302)
                      |+++||||++|||+++|++|+++|++|++++|+.++++.            . +.+|+++.++++++++++   ++++|+
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~------------~-~~~Dl~~~~~v~~~~~~~---~~~id~   65 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA------------D-LSTAEGRKQAIADVLAKC---SKGMDG   65 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC------------C-TTSHHHHHHHHHHHHTTC---TTCCSE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc------------c-cccCCCCHHHHHHHHHHh---CCCCCE
Confidence            689999999999999999999999999999998754321            1 668999999998887733   379999


Q ss_pred             EEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhhcH
Q 022103          111 LVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSE  190 (302)
Q Consensus       111 lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~  190 (302)
                      ||||||....      .+.|++++++|+.++++++++++|.|.++ +.++||++||..+.......+..     ++.+..
T Consensus        66 lv~~Ag~~~~------~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~~~~~~~~~-----~~~~~~  133 (257)
T 1fjh_A           66 LVLCAGLGPQ------TKVLGNVVSVNYFGATELMDAFLPALKKG-HQPAAVVISSVASAHLAFDKNPL-----ALALEA  133 (257)
T ss_dssp             EEECCCCCTT------CSSHHHHHHHHTHHHHHHHHHHHHHHHTS-SSCEEEEECCGGGGSSCGGGCTT-----HHHHHH
T ss_pred             EEECCCCCCC------cccHHHHHHHhhHHHHHHHHHHHHHHhhc-CCcEEEEECChhhhccccccchh-----hhhhcc
Confidence            9999998641      12389999999999999999999999876 56999999999887432211110     000000


Q ss_pred             HHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC--------
Q 022103          191 EQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ--------  262 (302)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~--------  262 (302)
                      ...++.... ..        +....+++..|++||++++.++++++.|++++||+|++|+||+++|+|.+..        
T Consensus       134 ~~~~~~~~~-~~--------~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~  204 (257)
T 1fjh_A          134 GEEAKARAI-VE--------HAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGE  204 (257)
T ss_dssp             TCHHHHHHH-HH--------TCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC-----------------
T ss_pred             cchhhhhhh-hh--------cccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhhccchhHHH
Confidence            000000000 00        0011224578999999999999999999998999999999999999986542        


Q ss_pred             ----------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          263 ----------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       263 ----------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                                ...+|+++|..+++++. ++..+++|+++..+|+.
T Consensus       205 ~~~~~~~~~~~~~~~~dvA~~~~~l~~-~~~~~~tG~~~~vdgG~  248 (257)
T 1fjh_A          205 SIAKFVPPMGRRAEPSEMASVIAFLMS-PAASYVHGAQIVIDGGI  248 (257)
T ss_dssp             ----CCCSTTSCCCTHHHHHHHHHHTS-GGGTTCCSCEEEESTTH
T ss_pred             HHHhcccccCCCCCHHHHHHHHHHHhC-chhcCCcCCEEEECCCc
Confidence                      13678999999999987 56678999999999875

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=99.98  E-value=1e-31  Score=256.15  Aligned_cols=224  Identities=14%  Similarity=0.056  Sum_probs=182.8

Q ss_pred             ccCcEEEEeCCCchHHHH--HHHHHHHcCCEEEEEecChhh------------HHHHHHHHhhCCCceeEEEeeCCCHHH
Q 022103           28 SKETIAIVTGANKGIGFA--LVKRLAELGLTVILTARDVER------------GQRAVESLSEKGLPVNFFQLDVSDPSS   93 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~a--la~~l~~~G~~V~l~~r~~~~------------~~~~~~~l~~~~~~~~~~~~Dlt~~~~   93 (302)
                      ..+|++|||||++|||++  ++++|+++|++|++++|+...            .+...+.+.+.+.++..+.+|+++.++
T Consensus        58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~~  137 (418)
T 4eue_A           58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNET  137 (418)
T ss_dssp             CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHHH
Confidence            679999999999999999  999999999999999997543            344555566667789999999999999


Q ss_pred             HHHHHHHHHhhCCCccEEEEcCCCC--------------CCCC---------------------CCCCHHHHHHHHHhhh
Q 022103           94 IEAFVSWFKSNFAALDILVNNAGVS--------------FNDI---------------------YKNTVEHAETVIRTNF  138 (302)
Q Consensus        94 ~~~~~~~~~~~~g~id~lv~~aG~~--------------~~~~---------------------~~~~~e~~~~~~~vn~  138 (302)
                      ++++++++.+++|++|+||||||..              ..++                     .+.+.++|+.++++|.
T Consensus       138 v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~vn~  217 (418)
T 4eue_A          138 KDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKVMG  217 (418)
T ss_dssp             HHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHhh
Confidence            9999999999999999999999974              1122                     3569999999999999


Q ss_pred             hHHH-HHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcc
Q 022103          139 YGAK-LLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEI  217 (302)
Q Consensus       139 ~~~~-~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (302)
                      .+.+ ++++++.+.+..+ ..++||++||+.+..+.+..                                        +
T Consensus       218 ~~~~~~~~~~l~~~~~~~-~gg~IV~iSSi~~~~~~p~~----------------------------------------~  256 (418)
T 4eue_A          218 GEDWQEWCEELLYEDCFS-DKATTIAYSYIGSPRTYKIY----------------------------------------R  256 (418)
T ss_dssp             SHHHHHHHHHHHHTTCEE-EEEEEEEEECCCCGGGTTTT----------------------------------------T
T ss_pred             HHHHHHHHHHHHHHhhhc-CCcEEEEEeCchhcCCCCcc----------------------------------------c
Confidence            9988 7778777644333 36899999999886543210                                        1


Q ss_pred             cccchhhHHHHHHHHHHHHHHccC-CCcEEEEeecCcccCCCCCCCC---------------CCCHHHHHHHHHHHhhcC
Q 022103          218 WTDYAVSKLALNAYTMVLAKRYEG-EGISVNSYCPGFTQTSMTQGQG---------------SHTADEAADVGARLLLLH  281 (302)
Q Consensus       218 ~~~Y~asK~a~~~~~~~la~e~~~-~gI~V~~v~PG~v~T~~~~~~~---------------~~~~~~~a~~~~~l~~~~  281 (302)
                      ..+|++||+|+++|+++||.|+++ +|||||+|+||.|.|++.....               ...+|+++..+.+|+.. 
T Consensus       257 ~~aY~ASKaAL~~ltrsLA~ELa~~~GIrVN~V~PG~v~T~~s~~ip~~p~y~~~~~~~mk~~G~~E~v~e~~~~L~sd-  335 (418)
T 4eue_A          257 EGTIGIAKKDLEDKAKLINEKLNRVIGGRAFVSVNKALVTKASAYIPTFPLYAAILYKVMKEKNIHENCIMQIERMFSE-  335 (418)
T ss_dssp             TSHHHHHHHHHHHHHHHHHHHHHHHHSCEEEEEECCCCCCHHHHTSTTHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHH-
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEECCcCcChhhhcCCCCcHHHHHHHHHHhhcCChHHHHHHHHHHhhc-
Confidence            278999999999999999999999 9999999999999999876552               25678999999999862 


Q ss_pred             CCCCCCcceeecCC
Q 022103          282 PQQLPTAKFYIGLD  295 (302)
Q Consensus       282 ~~~~~~G~~~~~~~  295 (302)
                        ...+|..+..++
T Consensus       336 --~~~~g~~~~~D~  347 (418)
T 4eue_A          336 --KIYSNEKIQFDD  347 (418)
T ss_dssp             --TTSSSSCCCCCT
T ss_pred             --cccCCCccccCC
Confidence              334566655554

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.97  E-value=7e-30  Score=219.42  Aligned_cols=191  Identities=18%  Similarity=0.163  Sum_probs=163.5

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCccEE
Q 022103           32 IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDIL  111 (302)
Q Consensus        32 ~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id~l  111 (302)
                      +++||||+||||++++++|+ +|++|++++|+.+                 .+.+|++|+++++++++++    +++|+|
T Consensus         5 ~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~-----------------~~~~D~~~~~~~~~~~~~~----~~~d~v   62 (202)
T 3d7l_A            5 KILLIGASGTLGSAVKERLE-KKAEVITAGRHSG-----------------DVTVDITNIDSIKKMYEQV----GKVDAI   62 (202)
T ss_dssp             EEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS-----------------SEECCTTCHHHHHHHHHHH----CCEEEE
T ss_pred             EEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc-----------------ceeeecCCHHHHHHHHHHh----CCCCEE
Confidence            79999999999999999999 9999999999863                 4789999999999999876    789999


Q ss_pred             EEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhhcH
Q 022103          112 VNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSE  190 (302)
Q Consensus       112 v~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~  190 (302)
                      |||||.... ++.+.+.++|++.+++|+.+++++++++.+.|.+   .++||++||..+..+.                 
T Consensus        63 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~iv~~sS~~~~~~~-----------------  122 (202)
T 3d7l_A           63 VSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLND---KGSFTLTTGIMMEDPI-----------------  122 (202)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEE---EEEEEEECCGGGTSCC-----------------
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhcc---CCEEEEEcchhhcCCC-----------------
Confidence            999997643 5677899999999999999999999999999864   3899999998775432                 


Q ss_pred             HHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCC------CCCC
Q 022103          191 EQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ------GQGS  264 (302)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~------~~~~  264 (302)
                                               +....|+++|++++.+++.++.|+ ++||+|+.|+||+++|++..      ....
T Consensus       123 -------------------------~~~~~Y~~sK~~~~~~~~~~~~e~-~~gi~v~~v~pg~v~~~~~~~~~~~~~~~~  176 (202)
T 3d7l_A          123 -------------------------VQGASAAMANGAVTAFAKSAAIEM-PRGIRINTVSPNVLEESWDKLEPFFEGFLP  176 (202)
T ss_dssp             -------------------------TTCHHHHHHHHHHHHHHHHHTTSC-STTCEEEEEEECCBGGGHHHHGGGSTTCCC
T ss_pred             -------------------------CccHHHHHHHHHHHHHHHHHHHHc-cCCeEEEEEecCccCCchhhhhhhccccCC
Confidence                                     223689999999999999999998 78999999999999998632      2345


Q ss_pred             CCHHHHHHHHHHHhhcCCCCCCCcceeecC
Q 022103          265 HTADEAADVGARLLLLHPQQLPTAKFYIGL  294 (302)
Q Consensus       265 ~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~  294 (302)
                      .+++++|..++.++.    ...+|+.|..+
T Consensus       177 ~~~~dva~~~~~~~~----~~~~G~~~~vd  202 (202)
T 3d7l_A          177 VPAAKVARAFEKSVF----GAQTGESYQVY  202 (202)
T ss_dssp             BCHHHHHHHHHHHHH----SCCCSCEEEEC
T ss_pred             CCHHHHHHHHHHhhh----ccccCceEecC
Confidence            789999999888763    34678777653

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.97  E-value=6.6e-30  Score=219.99  Aligned_cols=192  Identities=19%  Similarity=0.205  Sum_probs=162.8

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCccE
Q 022103           31 TIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDI  110 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id~  110 (302)
                      |+++||||+||||++++++|+++  +|++++|+.++.+...+++..     .++.+|++|++++++++++    ++++|+
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~~-----~~~~~D~~~~~~~~~~~~~----~~~id~   69 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVGA-----RALPADLADELEAKALLEE----AGPLDL   69 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHTC-----EECCCCTTSHHHHHHHHHH----HCSEEE
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhccC-----cEEEeeCCCHHHHHHHHHh----cCCCCE
Confidence            57999999999999999999998  999999999888877776642     7888999999999999887    579999


Q ss_pred             EEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhhc
Q 022103          111 LVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELS  189 (302)
Q Consensus       111 lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~  189 (302)
                      ||||||.... ++.+.+.+++++.+++|+.+++++++++.    ++ +.++||++||..+..+.+               
T Consensus        70 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----~~-~~~~iv~~sS~~~~~~~~---------------  129 (207)
T 2yut_A           70 LVHAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHAR----FQ-KGARAVFFGAYPRYVQVP---------------  129 (207)
T ss_dssp             EEECCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHCC----EE-EEEEEEEECCCHHHHSST---------------
T ss_pred             EEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHH----hc-CCcEEEEEcChhhccCCC---------------
Confidence            9999997644 56778899999999999999999999982    22 468999999988764422               


Q ss_pred             HHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCC-----CCC
Q 022103          190 EEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG-----QGS  264 (302)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~-----~~~  264 (302)
                                                 +...|+++|++++.++++++.+++++||+|+.|+||.+.|++...     ...
T Consensus       130 ---------------------------~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~  182 (207)
T 2yut_A          130 ---------------------------GFAAYAAAKGALEAYLEAARKELLREGVHLVLVRLPAVATGLWAPLGGPPKGA  182 (207)
T ss_dssp             ---------------------------TBHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEECCCCBCSGGGGGGTSCCTTC
T ss_pred             ---------------------------CcchHHHHHHHHHHHHHHHHHHHhhhCCEEEEEecCcccCCCccccCCCCCCC
Confidence                                       247899999999999999999999999999999999999988443     235


Q ss_pred             CCHHHHHHHHHHHhhc
Q 022103          265 HTADEAADVGARLLLL  280 (302)
Q Consensus       265 ~~~~~~a~~~~~l~~~  280 (302)
                      .+++++|..+++++..
T Consensus       183 ~~~~dva~~~~~~~~~  198 (207)
T 2yut_A          183 LSPEEAARKVLEGLFR  198 (207)
T ss_dssp             BCHHHHHHHHHHHHC-
T ss_pred             CCHHHHHHHHHHHHhC
Confidence            7899999999999874

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.96  E-value=1.8e-29  Score=247.90  Aligned_cols=208  Identities=16%  Similarity=0.118  Sum_probs=177.1

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCE-EEEE-ecC-------------hhhHHHHHHHHhhCCCceeEEEeeCCCH
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLT-VILT-ARD-------------VERGQRAVESLSEKGLPVNFFQLDVSDP   91 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~-V~l~-~r~-------------~~~~~~~~~~l~~~~~~~~~~~~Dlt~~   91 (302)
                      ..+++++|||||+||||+++|+.|+++|++ |+++ +|+             .+++++..+++.+.+.++.++.||++|.
T Consensus       248 ~~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~  327 (525)
T 3qp9_A          248 WQADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDA  327 (525)
T ss_dssp             SCTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSH
T ss_pred             ecCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCH
Confidence            356899999999999999999999999997 7777 898             3556777788877788999999999999


Q ss_pred             HHHHHHHHHHHhhCCCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcc
Q 022103           92 SSIEAFVSWFKSNFAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGT  170 (302)
Q Consensus        92 ~~~~~~~~~~~~~~g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~  170 (302)
                      ++++++++++. +++++|+||||||+... .+.+.+.++++.++++|+.|++++.+.+.+.+++++..++||++||+.+.
T Consensus       328 ~~v~~~~~~i~-~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~  406 (525)
T 3qp9_A          328 EAAARLLAGVS-DAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAI  406 (525)
T ss_dssp             HHHHHHHHTSC-TTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGT
T ss_pred             HHHHHHHHHHH-hcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHc
Confidence            99999999998 78999999999998755 57889999999999999999999999999998776336899999999998


Q ss_pred             cccccCcccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEee
Q 022103          171 LSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYC  250 (302)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~  250 (302)
                      .+.+.                                          +..|+++|+++++|    +.++...||+|++|+
T Consensus       407 ~g~~g------------------------------------------~~~YaaaKa~l~~l----A~~~~~~gi~v~sI~  440 (525)
T 3qp9_A          407 WGGAG------------------------------------------QGAYAAGTAFLDAL----AGQHRADGPTVTSVA  440 (525)
T ss_dssp             TCCTT------------------------------------------CHHHHHHHHHHHHH----HTSCCSSCCEEEEEE
T ss_pred             CCCCC------------------------------------------CHHHHHHHHHHHHH----HHHHHhCCCCEEEEE
Confidence            77543                                          37899999999987    456677899999999


Q ss_pred             cCcccCCCCCC-----------CCCCCHHHHHHHHHHHhhcC
Q 022103          251 PGFTQTSMTQG-----------QGSHTADEAADVGARLLLLH  281 (302)
Q Consensus       251 PG~v~T~~~~~-----------~~~~~~~~~a~~~~~l~~~~  281 (302)
                      ||+++|+|...           ....+|++++..+.+++..+
T Consensus       441 pG~~~tgm~~~~~~~~~~~~~g~~~l~pee~a~~l~~~l~~~  482 (525)
T 3qp9_A          441 WSPWEGSRVTEGATGERLRRLGLRPLAPATALTALDTALGHG  482 (525)
T ss_dssp             ECCBTTSGGGSSHHHHHHHHTTBCCBCHHHHHHHHHHHHHHT
T ss_pred             CCccccccccchhhHHHHHhcCCCCCCHHHHHHHHHHHHhCC
Confidence            99999999732           23478999999999998743

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=99.96  E-value=9.8e-30  Score=273.86  Aligned_cols=224  Identities=20%  Similarity=0.217  Sum_probs=186.9

Q ss_pred             ccccCcEEEEeCCCch-HHHHHHHHHHHcCCEEEEE-ecChhhHHHHHHHHhh----CCCceeEEEeeCCCHHHHHHHHH
Q 022103           26 WWSKETIAIVTGANKG-IGFALVKRLAELGLTVILT-ARDVERGQRAVESLSE----KGLPVNFFQLDVSDPSSIEAFVS   99 (302)
Q Consensus        26 ~~~~~k~vlItGas~g-IG~ala~~l~~~G~~V~l~-~r~~~~~~~~~~~l~~----~~~~~~~~~~Dlt~~~~~~~~~~   99 (302)
                      ++++||++|||||++| ||+++|+.|+++|++|+++ .|+.+++++..+++.+    .+.++.++.+|++|.++++++++
T Consensus       671 m~l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~  750 (1887)
T 2uv8_A          671 VTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIE  750 (1887)
T ss_dssp             BCCTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHH
Confidence            3588999999999998 9999999999999999998 6777777776666532    35678999999999999999999


Q ss_pred             HHHhh-----CC-CccEEEEcCCCCCC--CCCCCC--HHHHHHHHHhhhhHHHHHHHHH--hhhhhcCCCCCcEEEecCC
Q 022103          100 WFKSN-----FA-ALDILVNNAGVSFN--DIYKNT--VEHAETVIRTNFYGAKLLTESL--LPLFRRSPSKSRILNISSR  167 (302)
Q Consensus       100 ~~~~~-----~g-~id~lv~~aG~~~~--~~~~~~--~e~~~~~~~vn~~~~~~l~~~~--~~~l~~~~~~~~iv~vsS~  167 (302)
                      ++.+.     +| ++|+||||||+...  ++.+.+  .++|+.++++|+.+++.+++.+  +|.|.++ ..++||++||.
T Consensus       751 ~i~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~-~~G~IVnISS~  829 (1887)
T 2uv8_A          751 FIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETR-PAQVILPMSPN  829 (1887)
T ss_dssp             HHHSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSC-CEEEEEEECSC
T ss_pred             HHHHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhC-CCCEEEEEcCh
Confidence            99988     66 99999999998643  567778  8999999999999999999998  7888765 45899999999


Q ss_pred             CcccccccCcccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHH-HHHHHHHccCCCcEE
Q 022103          168 LGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAY-TMVLAKRYEGEGISV  246 (302)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~-~~~la~e~~~~gI~V  246 (302)
                      .+..+                                            ++..|++||+|+++| ++.++.+++++ |+|
T Consensus       830 ag~~g--------------------------------------------g~~aYaASKAAL~~Lttr~lA~ela~~-IrV  864 (1887)
T 2uv8_A          830 HGTFG--------------------------------------------GDGMYSESKLSLETLFNRWHSESWANQ-LTV  864 (1887)
T ss_dssp             TTCSS--------------------------------------------CBTTHHHHHHHGGGHHHHHHHSSCTTT-EEE
T ss_pred             HhccC--------------------------------------------CCchHHHHHHHHHHHHHHHHHHHhCCC-eEE
Confidence            88754                                            136799999999999 99999999887 999


Q ss_pred             EEeecCccc-CCCCCCC------------CCCCHHHHHHHHHHHhhcCC-CCCCCcceeecC--Cc
Q 022103          247 NSYCPGFTQ-TSMTQGQ------------GSHTADEAADVGARLLLLHP-QQLPTAKFYIGL--DP  296 (302)
Q Consensus       247 ~~v~PG~v~-T~~~~~~------------~~~~~~~~a~~~~~l~~~~~-~~~~~G~~~~~~--~~  296 (302)
                      |+|+||+|+ |+|....            +..+|+++|..+++|+. +. ..+++|+.+.++  |+
T Consensus       865 NaV~PG~V~tT~m~~~~~~~~~~~~~~plr~~sPEEVA~avlfLaS-d~~as~iTGq~I~VDVDGG  929 (1887)
T 2uv8_A          865 CGAIIGWTRGTGLMSANNIIAEGIEKMGVRTFSQKEMAFNLLGLLT-PEVVELCQKSPVMADLNGG  929 (1887)
T ss_dssp             EEEEECCEECC-----CCTTHHHHHTTSCCCEEHHHHHHHHHGGGS-HHHHHHHHHSCEEEEESCS
T ss_pred             EEEEecccccccccccchhHHHHHHhcCCCCCCHHHHHHHHHHHhC-CCccccccCcEEEEECCCC
Confidence            999999999 8886521            23479999999999987 33 467889888764  55

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=99.96  E-value=3.4e-30  Score=270.09  Aligned_cols=225  Identities=20%  Similarity=0.215  Sum_probs=190.0

Q ss_pred             cccccCcEEEEeCCCch-HHHHHHHHHHHcCCEEEEE-ecChhhHHHHHHHHhhC----CCceeEEEeeCCCHHHHHHHH
Q 022103           25 KWWSKETIAIVTGANKG-IGFALVKRLAELGLTVILT-ARDVERGQRAVESLSEK----GLPVNFFQLDVSDPSSIEAFV   98 (302)
Q Consensus        25 ~~~~~~k~vlItGas~g-IG~ala~~l~~~G~~V~l~-~r~~~~~~~~~~~l~~~----~~~~~~~~~Dlt~~~~~~~~~   98 (302)
                      .+++++|++|||||++| ||+++|+.|+++|++|+++ +|+.+++++..+++.+.    +.++.++.+|++|.+++++++
T Consensus       471 ~msL~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLV  550 (1688)
T 2pff_A          471 XVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALI  550 (1688)
T ss_dssp             CCCCCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHH
T ss_pred             ccccCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHH
Confidence            45688999999999998 9999999999999999998 67777777777766332    557899999999999999999


Q ss_pred             HHHHhh-----CC-CccEEEEcCCCCCC--CCCCCC--HHHHHHHHHhhhhHHHHHHHHH--hhhhhcCCCCCcEEEecC
Q 022103           99 SWFKSN-----FA-ALDILVNNAGVSFN--DIYKNT--VEHAETVIRTNFYGAKLLTESL--LPLFRRSPSKSRILNISS  166 (302)
Q Consensus        99 ~~~~~~-----~g-~id~lv~~aG~~~~--~~~~~~--~e~~~~~~~vn~~~~~~l~~~~--~~~l~~~~~~~~iv~vsS  166 (302)
                      +++.+.     +| ++|+||||||+...  ++.+.+  .++|++++++|+.+++.+++.+  +|.|.++ ..++||++||
T Consensus       551 e~I~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~kr-ggGrIVnISS  629 (1688)
T 2pff_A          551 EFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETR-PAQVILPMSP  629 (1688)
T ss_dssp             HHHHSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTS-CEEECCCCCS
T ss_pred             HHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhC-CCCEEEEEEC
Confidence            999988     77 99999999998643  567777  8999999999999999999999  7888765 4589999999


Q ss_pred             CCcccccccCcccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHH-HHHHHHHccCCCcE
Q 022103          167 RLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAY-TMVLAKRYEGEGIS  245 (302)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~-~~~la~e~~~~gI~  245 (302)
                      ..+..+                                            +..+|++||+|+++| ++.+++++++. |+
T Consensus       630 iAG~~G--------------------------------------------g~saYaASKAAL~aLttrsLAeEla~~-IR  664 (1688)
T 2pff_A          630 NHGTFG--------------------------------------------GDGMYSESKLSLETLFNRWHSESWANQ-LT  664 (1688)
T ss_dssp             CTTTSS--------------------------------------------CBTTHHHHHHHHTHHHHHTTTSSCTTT-EE
T ss_pred             hHhccC--------------------------------------------CchHHHHHHHHHHHHHHHHHHHHcCCC-eE
Confidence            988654                                            136799999999999 88899988877 99


Q ss_pred             EEEeecCccc-CCCCCCC------------CCCCHHHHHHHHHHHhhcCC-CCCCCcceeecC--Cc
Q 022103          246 VNSYCPGFTQ-TSMTQGQ------------GSHTADEAADVGARLLLLHP-QQLPTAKFYIGL--DP  296 (302)
Q Consensus       246 V~~v~PG~v~-T~~~~~~------------~~~~~~~~a~~~~~l~~~~~-~~~~~G~~~~~~--~~  296 (302)
                      ||+|+||+|+ |+|....            +..+|+++|..+++|++ +. ..+++|+.+.++  |+
T Consensus       665 VNaVaPG~V~TT~M~~~~e~~~~~l~~iplR~~sPEEVA~aIlFLaS-d~sAs~ITGq~I~VDVDGG  730 (1688)
T 2pff_A          665 VCGAIIGWTRGTGLMSANNIIAEGIEKMGVRTFSQKEMAFNLLGLLT-PEVVELCQKSPVMADLNGG  730 (1688)
T ss_dssp             CCCCCCCCCCCCSSSCTTTTCSTTTSSSSCCCCCCCTTHHHHHHHTS-TTHHHHHTTSCCCCCCSCS
T ss_pred             EEEEEECcCcCCcccCCchHHHHHHHhCCCCCCCHHHHHHHHHHHhC-CCccccccCcEEEEEcCCC
Confidence            9999999999 7875421            23479999999999987 44 567889988764  55

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=99.96  E-value=1.1e-28  Score=265.34  Aligned_cols=223  Identities=20%  Similarity=0.204  Sum_probs=185.9

Q ss_pred             cccccCcEEEEeCCCch-HHHHHHHHHHHcCCEEEEEe-cChhhHHHHHHHH----hhCCCceeEEEeeCCCHHHHHHHH
Q 022103           25 KWWSKETIAIVTGANKG-IGFALVKRLAELGLTVILTA-RDVERGQRAVESL----SEKGLPVNFFQLDVSDPSSIEAFV   98 (302)
Q Consensus        25 ~~~~~~k~vlItGas~g-IG~ala~~l~~~G~~V~l~~-r~~~~~~~~~~~l----~~~~~~~~~~~~Dlt~~~~~~~~~   98 (302)
                      .++++||++|||||++| ||+++|+.|+++|++|++++ |+.++++...+++    ...+.++.++.||++|.+++++++
T Consensus       647 ~m~L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv  726 (1878)
T 2uv9_A          647 GLTFQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALV  726 (1878)
T ss_dssp             CBCCTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHH
Confidence            34688999999999999 99999999999999999985 6666666555544    333668899999999999999999


Q ss_pred             HHHHhh---CC-CccEEEEcCCCCCC--CCCCCC--HHHHHHHHHhhhhHHHHHHHH--HhhhhhcCCCCCcEEEecCCC
Q 022103           99 SWFKSN---FA-ALDILVNNAGVSFN--DIYKNT--VEHAETVIRTNFYGAKLLTES--LLPLFRRSPSKSRILNISSRL  168 (302)
Q Consensus        99 ~~~~~~---~g-~id~lv~~aG~~~~--~~~~~~--~e~~~~~~~vn~~~~~~l~~~--~~~~l~~~~~~~~iv~vsS~~  168 (302)
                      +++.+.   +| ++|+||||||+...  ++.+.+  .++|+.++++|+.+++++++.  +++.|.++ +.++||++||..
T Consensus       727 ~~i~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~-~~G~IVnISS~a  805 (1878)
T 2uv9_A          727 NYIYDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETR-PAQVILPLSPNH  805 (1878)
T ss_dssp             HHHHCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSC-CEEECCEECSCS
T ss_pred             HHHHHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhC-CCCEEEEEcchh
Confidence            999998   88 99999999998643  567788  899999999999999999987  67887665 458999999998


Q ss_pred             cccccccCcccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHH-HccCCCcEEE
Q 022103          169 GTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAK-RYEGEGISVN  247 (302)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~-e~~~~gI~V~  247 (302)
                      +..+.                                            +..|++||+|+++|++.++. ++++. |+||
T Consensus       806 g~~gg--------------------------------------------~~aYaASKAAL~aLt~~laAeEla~~-IrVN  840 (1878)
T 2uv9_A          806 GTFGN--------------------------------------------DGLYSESKLALETLFNRWYSESWGNY-LTIC  840 (1878)
T ss_dssp             SSSSC--------------------------------------------CSSHHHHHHHHTTHHHHHHHSTTTTT-EEEE
T ss_pred             hccCC--------------------------------------------chHHHHHHHHHHHHHHHHHHHHcCCC-eEEE
Confidence            87541                                            26799999999999887654 47766 9999


Q ss_pred             EeecCccc-CCCCCC------------CCCCCHHHHHHHHHHHhhcCCC-CCCCcceeecC
Q 022103          248 SYCPGFTQ-TSMTQG------------QGSHTADEAADVGARLLLLHPQ-QLPTAKFYIGL  294 (302)
Q Consensus       248 ~v~PG~v~-T~~~~~------------~~~~~~~~~a~~~~~l~~~~~~-~~~~G~~~~~~  294 (302)
                      +|+||+++ |+|...            .+..+|+++|..+++|+. +.. .+++|..+..+
T Consensus       841 aVaPG~V~gT~m~~~~~~~~~~~~~~plr~~sPeEVA~avlfLaS-d~a~s~iTGq~I~VD  900 (1878)
T 2uv9_A          841 GAVIGWTRGTGLMSANNLVAEGVEKLGVRTFSQQEMAFNLLGLMA-PAIVNLCQSDPVFAD  900 (1878)
T ss_dssp             EEEECCBCCTTSCSHHHHTHHHHHTTTCCCBCHHHHHHHHHHHHS-HHHHHHHTTSCEEEE
T ss_pred             EEEecceecCcccccchhhHHHHHhcCCCCCCHHHHHHHHHHHhC-CcccccccCcEEEEE
Confidence            99999999 998642            134589999999999986 343 67889988753

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.96  E-value=3.7e-29  Score=221.36  Aligned_cols=227  Identities=22%  Similarity=0.230  Sum_probs=170.5

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCccE
Q 022103           31 TIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDI  110 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id~  110 (302)
                      |+++||||+||||++++++|+++|++|++++|+.++.+.             .+.+|+++.++++++++++   .+++|+
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------------~~~~D~~~~~~~~~~~~~~---~~~~d~   65 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA-------------DLSTPGGRETAVAAVLDRC---GGVLDG   65 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC-------------CTTSHHHHHHHHHHHHHHH---TTCCSE
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc-------------cccCCcccHHHHHHHHHHc---CCCccE
Confidence            589999999999999999999999999999998754221             1568999999999988865   368999


Q ss_pred             EEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhhcH
Q 022103          111 LVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSE  190 (302)
Q Consensus       111 lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~  190 (302)
                      ||||||....      .+.++..+++|+.+++++++++.+.|.+. ..++||++||..+..+.......     .+....
T Consensus        66 vi~~Ag~~~~------~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~~~iv~~sS~~~~~~~~~~~~~-----~~~~~~  133 (255)
T 2dkn_A           66 LVCCAGVGVT------AANSGLVVAVNYFGVSALLDGLAEALSRG-QQPAAVIVGSIAATQPGAAELPM-----VEAMLA  133 (255)
T ss_dssp             EEECCCCCTT------SSCHHHHHHHHTHHHHHHHHHHHHHHHTS-SSCEEEEECCGGGGSTTGGGCHH-----HHHHHH
T ss_pred             EEECCCCCCc------chhHHHHHHHHhHHHHHHHHHHHHHhhhc-CCceEEEEeccccccccccccch-----hhhhcc
Confidence            9999997542      23488999999999999999999999876 46899999998887543211000     000000


Q ss_pred             HHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCC---------
Q 022103          191 EQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG---------  261 (302)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~---------  261 (302)
                      ...+.          ...|.+. .+++...|++||++++.+++.++.++.++||+|++|+||.+.|++...         
T Consensus       134 ~~~~~----------~~~~~~~-~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~~~~~~~~~~~  202 (255)
T 2dkn_A          134 GDEAR----------AIELAEQ-QGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQASKADPRYGE  202 (255)
T ss_dssp             TCHHH----------HHHHHHH-HCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHHHHHHCTTTHH
T ss_pred             cchhh----------hhhhccc-cCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhhhcccchhhHH
Confidence            00000          0000000 012347899999999999999999998889999999999999976321         


Q ss_pred             ---------CCCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          262 ---------QGSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       262 ---------~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                               ....+++++|..+++++. ++...++|++|..+++.
T Consensus       203 ~~~~~~~~~~~~~~~~dva~~~~~l~~-~~~~~~~G~~~~v~gg~  246 (255)
T 2dkn_A          203 STRRFVAPLGRGSEPREVAEAIAFLLG-PQASFIHGSVLFVDGGM  246 (255)
T ss_dssp             HHHSCCCTTSSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTH
T ss_pred             HHHHHHHHhcCCCCHHHHHHHHHHHhC-CCcccceeeEEEecCCe
Confidence                     124689999999999987 44556889999988874

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.95  E-value=1.2e-26  Score=225.89  Aligned_cols=199  Identities=21%  Similarity=0.234  Sum_probs=169.1

Q ss_pred             CcEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecCh---hhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           30 ETIAIVTGANKGIGFALVKRLAELGL-TVILTARDV---ERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        30 ~k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~~---~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      ++++|||||+||||+++|+.|+++|+ +|++++|+.   +..++..+++.+.+.++.++.||++|.++++++++++.+. 
T Consensus       239 ~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~-  317 (496)
T 3mje_A          239 HGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAELPED-  317 (496)
T ss_dssp             CSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTT-
T ss_pred             CCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHh-
Confidence            58999999999999999999999999 899999974   3467777888888889999999999999999999998877 


Q ss_pred             CCccEEEEcCCCC-CC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCccccccc
Q 022103          106 AALDILVNNAGVS-FN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSIL  183 (302)
Q Consensus       106 g~id~lv~~aG~~-~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~  183 (302)
                      +++|+||||||+. .. .+.+.+.++++.++++|+.+++++.+.+.+.     ..++||++||..+..+.+.        
T Consensus       318 g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~-----~~~~iV~~SS~a~~~g~~g--------  384 (496)
T 3mje_A          318 APLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADL-----DLDAFVLFSSGAAVWGSGG--------  384 (496)
T ss_dssp             SCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTS-----CCSEEEEEEEHHHHTTCTT--------
T ss_pred             CCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhcc-----CCCEEEEEeChHhcCCCCC--------
Confidence            7899999999986 43 5788999999999999999999999988765     3589999999998876543        


Q ss_pred             chhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCC-C
Q 022103          184 EDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG-Q  262 (302)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~-~  262 (302)
                                                        +..|+++|+++++|++.++    .+||++++|+||++.+..... .
T Consensus       385 ----------------------------------~~~YaAaKa~ldala~~~~----~~Gi~v~sV~pG~w~~~gm~~~~  426 (496)
T 3mje_A          385 ----------------------------------QPGYAAANAYLDALAEHRR----SLGLTASSVAWGTWGEVGMATDP  426 (496)
T ss_dssp             ----------------------------------CHHHHHHHHHHHHHHHHHH----HTTCCCEEEEECEESSSCC----
T ss_pred             ----------------------------------cHHHHHHHHHHHHHHHHHH----hcCCeEEEEECCcccCCccccCh
Confidence                                              3789999999999988655    369999999999986544332 1


Q ss_pred             -----------CCCCHHHHHHHHHHHhhc
Q 022103          263 -----------GSHTADEAADVGARLLLL  280 (302)
Q Consensus       263 -----------~~~~~~~~a~~~~~l~~~  280 (302)
                                 ...+|++.+..+.+++..
T Consensus       427 ~~~~~l~~~g~~~l~pe~~~~~l~~~l~~  455 (496)
T 3mje_A          427 EVHDRLVRQGVLAMEPEHALGALDQMLEN  455 (496)
T ss_dssp             --CHHHHHTTEEEECHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhcCCCCCCHHHHHHHHHHHHcC
Confidence                       126899999999988863

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.94  E-value=1.5e-26  Score=236.99  Aligned_cols=199  Identities=22%  Similarity=0.251  Sum_probs=170.9

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHH-HcCC-EEEEEecC---hhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHH
Q 022103           28 SKETIAIVTGANKGIGFALVKRLA-ELGL-TVILTARD---VERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFK  102 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~-~~G~-~V~l~~r~---~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~  102 (302)
                      .++++++||||++|||+++|+.|+ ++|+ +|++++|+   .++.++..+++.+.|.++.++.||++|+++++++++++.
T Consensus       528 ~~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~  607 (795)
T 3slk_A          528 DAAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASIP  607 (795)
T ss_dssp             CTTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSC
T ss_pred             ccccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Confidence            468999999999999999999999 7899 59999999   456788888888888899999999999999999999998


Q ss_pred             hhCCCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCccccc
Q 022103          103 SNFAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKS  181 (302)
Q Consensus       103 ~~~g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~  181 (302)
                      +.+ +||+||||||+... .+.+++.++|+.++++|+.|++++.+++.+.|       +||++||.++..+.+.      
T Consensus       608 ~~~-~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~l-------~iV~~SS~ag~~g~~g------  673 (795)
T 3slk_A          608 DEH-PLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDPDV-------ALVLFSSVSGVLGSGG------  673 (795)
T ss_dssp             TTS-CEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCTTS-------EEEEEEETHHHHTCSS------
T ss_pred             HhC-CCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhhCC-------EEEEEccHHhcCCCCC------
Confidence            876 89999999998765 67889999999999999999999999997765       7999999999877544      


Q ss_pred             ccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCC-
Q 022103          182 ILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ-  260 (302)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~-  260 (302)
                                                          +..|+++|+    |+++|+.++.++||++++|+||++.|.+.. 
T Consensus       674 ------------------------------------~~~YaAaka----~~~alA~~~~~~Gi~v~sI~pG~v~t~g~~~  713 (795)
T 3slk_A          674 ------------------------------------QGNYAAANS----FLDALAQQRQSRGLPTRSLAWGPWAEHGMAS  713 (795)
T ss_dssp             ------------------------------------CHHHHHHHH----HHHHHHHHHHHTTCCEEEEEECCCSCCCHHH
T ss_pred             ------------------------------------CHHHHHHHH----HHHHHHHHHHHcCCeEEEEECCeECcchhhc
Confidence                                                377999996    555666666668999999999999987532 


Q ss_pred             -------------CCCCCCHHHHHHHHHHHhhc
Q 022103          261 -------------GQGSHTADEAADVGARLLLL  280 (302)
Q Consensus       261 -------------~~~~~~~~~~a~~~~~l~~~  280 (302)
                                   ......+++....+...+..
T Consensus       714 ~~~~~~~~~~~~~g~~~l~~~e~~~~~~~~l~~  746 (795)
T 3slk_A          714 TLREAEQDRLARSGLLPISTEEGLSQFDAACGG  746 (795)
T ss_dssp             HHHHHHHHHHHHTTBCCCCHHHHHHHHHHHHTS
T ss_pred             cccHHHHHHHHhcCCCCCCHHHHHHHHHHHHhC
Confidence                         12346788888888777753

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.94  E-value=2.6e-26  Score=257.50  Aligned_cols=226  Identities=18%  Similarity=0.198  Sum_probs=174.4

Q ss_pred             ccCcEEEEeCCCch-HHHHHHHHHHHcCCEEEEEecChhh-----HHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHH
Q 022103           28 SKETIAIVTGANKG-IGFALVKRLAELGLTVILTARDVER-----GQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWF  101 (302)
Q Consensus        28 ~~~k~vlItGas~g-IG~ala~~l~~~G~~V~l~~r~~~~-----~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~  101 (302)
                      ++||++|||||++| ||+++|+.|+++|++|++++|+.++     ++++.+++...+.++..+.+|++|.++++++++++
T Consensus      2134 l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~i 2213 (3089)
T 3zen_D         2134 XXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVEWV 2213 (3089)
T ss_dssp             CCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHHH
Confidence            78999999999999 9999999999999999999998776     67777777766778899999999999999999999


Q ss_pred             Hh----hCCCccEEEEcCCCC----C--CCCCCCCHHHHHHH----HHhhhhHHHHHHHHHhhhhhcCCCCC--c-EEEe
Q 022103          102 KS----NFAALDILVNNAGVS----F--NDIYKNTVEHAETV----IRTNFYGAKLLTESLLPLFRRSPSKS--R-ILNI  164 (302)
Q Consensus       102 ~~----~~g~id~lv~~aG~~----~--~~~~~~~~e~~~~~----~~vn~~~~~~l~~~~~~~l~~~~~~~--~-iv~v  164 (302)
                      .+    .||++|+||||||+.    .  ....+.+.++|+..    +++|+.+.+.+++.+.+.|.+....+  . ++.+
T Consensus      2214 ~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~~ii~~~ 2293 (3089)
T 3zen_D         2214 GTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASRLHVVLPG 2293 (3089)
T ss_dssp             TSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCEEEEEEE
T ss_pred             HhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEEEC
Confidence            98    889999999999972    1  12233455555544    99999999999999999998763211  2 2222


Q ss_pred             cCCCcccccccCcccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHH--ccCC
Q 022103          165 SSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKR--YEGE  242 (302)
Q Consensus       165 sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e--~~~~  242 (302)
                      ++..+..                                            ++..+|++||+|+++|+++||.|  +++ 
T Consensus      2294 ss~~g~~--------------------------------------------g~~~aYsASKaAl~~LtrslA~E~~~a~- 2328 (3089)
T 3zen_D         2294 SPNRGMF--------------------------------------------GGDGAYGEAKSALDALENRWSAEKSWAE- 2328 (3089)
T ss_dssp             CSSTTSC--------------------------------------------SSCSSHHHHGGGHHHHHHHHHHCSTTTT-
T ss_pred             CcccccC--------------------------------------------CCchHHHHHHHHHHHHHHHHHhccccCC-
Confidence            3222211                                            12357999999999999999999  665 


Q ss_pred             CcEEEEeecCccc-CCCCCCC------------CCCCHHHHHHHHHHHhhcCCCCCCCcceee--cCCccc
Q 022103          243 GISVNSYCPGFTQ-TSMTQGQ------------GSHTADEAADVGARLLLLHPQQLPTAKFYI--GLDPFV  298 (302)
Q Consensus       243 gI~V~~v~PG~v~-T~~~~~~------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~--~~~~~~  298 (302)
                      +|+||.|+||+|+ |++....            +..+|+|+|..+++|++.......+|..+.  .+|+..
T Consensus      2329 ~IrVn~v~PG~v~tT~l~~~~~~~~~~~~~~~~r~~~PeEIA~avlfLaS~~a~~~~~~~p~~vdl~GG~~ 2399 (3089)
T 3zen_D         2329 RVSLAHALIGWTKGTGLMGQNDAIVSAVEEAGVTTYTTDEMAAMLLDLCTVETKVAAAGAPVKVDLTGGLG 2399 (3089)
T ss_dssp             TEEEEEEECCCEECSTTTTTTTTTHHHHGGGSCBCEEHHHHHHHHHHTTSHHHHHHHHHSCEEEECSBSCS
T ss_pred             CeEEEEEeecccCCCcccccchhHHHHHHhcCCCCCCHHHHHHHHHHHhChhhhhHhcCCeEEEEcCCCcC
Confidence            6999999999998 7775432            224699999999999873333344444333  335543

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.93  E-value=2.6e-25  Score=199.58  Aligned_cols=206  Identities=17%  Similarity=0.099  Sum_probs=160.2

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      |++|+++||||+||||+++++.|+++|++|++++|+..+..         +..+.++.+|++|.+++.++++       .
T Consensus         1 m~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~---------~~~~~~~~~Dl~d~~~~~~~~~-------~   64 (267)
T 3rft_A            1 MAMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA---------GPNEECVQCDLADANAVNAMVA-------G   64 (267)
T ss_dssp             CCEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC---------CTTEEEEECCTTCHHHHHHHHT-------T
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc---------CCCCEEEEcCCCCHHHHHHHHc-------C
Confidence            35689999999999999999999999999999999975432         4578999999999999998887       6


Q ss_pred             ccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhh
Q 022103          108 LDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEE  187 (302)
Q Consensus       108 id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~  187 (302)
                      +|+||||||..       +.+.|++++++|+.+++++++++.+.     +.++||++||..+........          
T Consensus        65 ~D~vi~~Ag~~-------~~~~~~~~~~~N~~g~~~l~~a~~~~-----~~~~iv~~SS~~~~g~~~~~~----------  122 (267)
T 3rft_A           65 CDGIVHLGGIS-------VEKPFEQILQGNIIGLYNLYEAARAH-----GQPRIVFASSNHTIGYYPQTE----------  122 (267)
T ss_dssp             CSEEEECCSCC-------SCCCHHHHHHHHTHHHHHHHHHHHHT-----TCCEEEEEEEGGGGTTSBTTS----------
T ss_pred             CCEEEECCCCc-------CcCCHHHHHHHHHHHHHHHHHHHHHc-----CCCEEEEEcchHHhCCCCCCC----------
Confidence            89999999984       33457889999999999999999442     468999999987763222110          


Q ss_pred             hcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC---CC
Q 022103          188 LSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ---GS  264 (302)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~---~~  264 (302)
                                          ...+...+.+...|+.||++++.+++.++.+   .|++++.|.||.+.+++....   ..
T Consensus       123 --------------------~~~e~~~~~~~~~Y~~sK~~~e~~~~~~a~~---~g~~~~~vr~~~v~~~~~~~~~~~~~  179 (267)
T 3rft_A          123 --------------------RLGPDVPARPDGLYGVSKCFGENLARMYFDK---FGQETALVRIGSCTPEPNNYRMLSTW  179 (267)
T ss_dssp             --------------------CBCTTSCCCCCSHHHHHHHHHHHHHHHHHHH---HCCCEEEEEECBCSSSCCSTTHHHHB
T ss_pred             --------------------CCCCCCCCCCCChHHHHHHHHHHHHHHHHHH---hCCeEEEEEeecccCCCCCCCceeeE
Confidence                                0001122344578999999999999999988   478899999999888765432   23


Q ss_pred             CCHHHHHHHHHHHhhcCCCCCCCcceeecCCc
Q 022103          265 HTADEAADVGARLLLLHPQQLPTAKFYIGLDP  296 (302)
Q Consensus       265 ~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  296 (302)
                      ..+++++..+..++.  ..+...+.+|+..+.
T Consensus       180 ~~~~d~a~~~~~~~~--~~~~~~~~~~~~s~~  209 (267)
T 3rft_A          180 FSHDDFVSLIEAVFR--APVLGCPVVWGASAN  209 (267)
T ss_dssp             CCHHHHHHHHHHHHH--CSCCCSCEEEECCCC
T ss_pred             EcHHHHHHHHHHHHh--CCCCCceEEEEeCCC
Confidence            678999999988886  333344566766654

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.93  E-value=3.8e-25  Score=215.31  Aligned_cols=202  Identities=20%  Similarity=0.227  Sum_probs=167.7

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCE-EEEEecChh---hHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHH
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLT-VILTARDVE---RGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFK  102 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~-V~l~~r~~~---~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~  102 (302)
                      ..+++++|||||+||||+++++.|+++|++ |++++|+..   ..++..+++...+.++.++.+|++|.+++.++++++ 
T Consensus       223 ~~~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i-  301 (486)
T 2fr1_A          223 WKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGI-  301 (486)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTS-
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHH-
Confidence            356889999999999999999999999995 999999875   456777778777888999999999999999999998 


Q ss_pred             hhCCCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCccccc
Q 022103          103 SNFAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKS  181 (302)
Q Consensus       103 ~~~g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~  181 (302)
                      ..++++|+||||||.... .+.+.+.++++.++++|+.|++++.+.+.+.     ..++||++||..+..+.+.      
T Consensus       302 ~~~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~-----~~~~~V~~SS~a~~~g~~g------  370 (486)
T 2fr1_A          302 GDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTREL-----DLTAFVLFSSFASAFGAPG------  370 (486)
T ss_dssp             CTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTS-----CCSEEEEEEEHHHHTCCTT------
T ss_pred             HhcCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcC-----CCCEEEEEcChHhcCCCCC------
Confidence            566899999999998754 5678899999999999999999999987652     4689999999988766433      


Q ss_pred             ccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCC-CCC
Q 022103          182 ILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTS-MTQ  260 (302)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~-~~~  260 (302)
                                                          ...|+++|++++.|++.++    ..|+++++|+||++.++ |..
T Consensus       371 ------------------------------------~~~Yaaaka~l~~la~~~~----~~gi~v~~i~pG~~~~~gm~~  410 (486)
T 2fr1_A          371 ------------------------------------LGGYAPGNAYLDGLAQQRR----SDGLPATAVAWGTWAGSGMAE  410 (486)
T ss_dssp             ------------------------------------CTTTHHHHHHHHHHHHHHH----HTTCCCEEEEECCBC------
T ss_pred             ------------------------------------CHHHHHHHHHHHHHHHHHH----hcCCeEEEEECCeeCCCcccc
Confidence                                                3679999999999877655    36999999999999876 532


Q ss_pred             CC----------CCCCHHHHHHHHHHHhhc
Q 022103          261 GQ----------GSHTADEAADVGARLLLL  280 (302)
Q Consensus       261 ~~----------~~~~~~~~a~~~~~l~~~  280 (302)
                      ..          ...++++++..+..++..
T Consensus       411 ~~~~~~~~~~g~~~i~~e~~a~~l~~~l~~  440 (486)
T 2fr1_A          411 GPVADRFRRHGVIEMPPETACRALQNALDR  440 (486)
T ss_dssp             ------CTTTTEECBCHHHHHHHHHHHHHT
T ss_pred             hhHHHHHHhcCCCCCCHHHHHHHHHHHHhC
Confidence            21          247899999999999863

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.93  E-value=2.1e-24  Score=211.20  Aligned_cols=198  Identities=24%  Similarity=0.260  Sum_probs=169.0

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecChh---hHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHh
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGL-TVILTARDVE---RGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKS  103 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~~~---~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~  103 (302)
                      .+++++|||||+||||+++++.|+++|+ +|++++|+..   ..++..+++...+.++.++.||++|.+++++++++   
T Consensus       257 ~~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~---  333 (511)
T 2z5l_A          257 QPSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTA---  333 (511)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHH---
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhc---
Confidence            4679999999999999999999999999 6999999873   45677778877788899999999999999999886   


Q ss_pred             hCCCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccc
Q 022103          104 NFAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSI  182 (302)
Q Consensus       104 ~~g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~  182 (302)
                        +++|+||||||+... .+.+.+.+.++.++++|+.+++++.+.+.+. .   ..++||++||..+..+.+.       
T Consensus       334 --~~ld~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~-~---~~~~~V~~SS~a~~~g~~g-------  400 (511)
T 2z5l_A          334 --YPPNAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADI-K---GLDAFVLFSSVTGTWGNAG-------  400 (511)
T ss_dssp             --SCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSC-T---TCCCEEEEEEGGGTTCCTT-------
T ss_pred             --CCCcEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhc-c---CCCEEEEEeCHHhcCCCCC-------
Confidence              689999999998755 5678899999999999999999999887543 1   3589999999988766433       


Q ss_pred             cchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcc-cCCCCCC
Q 022103          183 LEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFT-QTSMTQG  261 (302)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v-~T~~~~~  261 (302)
                                                         ...|+++|++++.|++.++    ..|+++++|+||++ +|+|...
T Consensus       401 -----------------------------------~~~YaaaKa~ld~la~~~~----~~gi~v~sv~pG~~~~tgm~~~  441 (511)
T 2z5l_A          401 -----------------------------------QGAYAAANAALDALAERRR----AAGLPATSVAWGLWGGGGMAAG  441 (511)
T ss_dssp             -----------------------------------BHHHHHHHHHHHHHHHHHH----TTTCCCEEEEECCBCSTTCCCC
T ss_pred             -----------------------------------CHHHHHHHHHHHHHHHHHH----HcCCcEEEEECCcccCCccccc
Confidence                                               3679999999999998764    46999999999999 8888754


Q ss_pred             C----------CCCCHHHHHHHHHHHhhc
Q 022103          262 Q----------GSHTADEAADVGARLLLL  280 (302)
Q Consensus       262 ~----------~~~~~~~~a~~~~~l~~~  280 (302)
                      .          ...++++++..+...+..
T Consensus       442 ~~~~~~~~~g~~~l~~e~~a~~l~~al~~  470 (511)
T 2z5l_A          442 AGEESLSRRGLRAMDPDAAVDALLGAMGR  470 (511)
T ss_dssp             HHHHHHHHHTBCCBCHHHHHHHHHHHHHH
T ss_pred             ccHHHHHhcCCCCCCHHHHHHHHHHHHhC
Confidence            2          357899999999999864

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.92  E-value=1.9e-24  Score=189.95  Aligned_cols=197  Identities=20%  Similarity=0.197  Sum_probs=150.8

Q ss_pred             ccccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCce-eEEEeeCCCHHHHHHHHHHHH
Q 022103           24 TKWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPV-NFFQLDVSDPSSIEAFVSWFK  102 (302)
Q Consensus        24 ~~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~-~~~~~Dlt~~~~~~~~~~~~~  102 (302)
                      ....+++++++||||+|+||++++++|+++|++|++++|+.++++....      ..+ .++.+|++         +.+.
T Consensus        15 ~~~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~------~~~~~~~~~Dl~---------~~~~   79 (236)
T 3e8x_A           15 ENLYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE------RGASDIVVANLE---------EDFS   79 (236)
T ss_dssp             ------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH------TTCSEEEECCTT---------SCCG
T ss_pred             cccCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh------CCCceEEEcccH---------HHHH
Confidence            3456889999999999999999999999999999999999987665433      157 88999999         3344


Q ss_pred             hhCCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccc
Q 022103          103 SNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSI  182 (302)
Q Consensus       103 ~~~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~  182 (302)
                      +.++.+|+||||||...       .++++..+++|+.++.++++++...     +.++||++||..+..+...       
T Consensus        80 ~~~~~~D~vi~~ag~~~-------~~~~~~~~~~n~~~~~~l~~a~~~~-----~~~~iv~~SS~~~~~~~~~-------  140 (236)
T 3e8x_A           80 HAFASIDAVVFAAGSGP-------HTGADKTILIDLWGAIKTIQEAEKR-----GIKRFIMVSSVGTVDPDQG-------  140 (236)
T ss_dssp             GGGTTCSEEEECCCCCT-------TSCHHHHHHTTTHHHHHHHHHHHHH-----TCCEEEEECCTTCSCGGGS-------
T ss_pred             HHHcCCCEEEECCCCCC-------CCCccccchhhHHHHHHHHHHHHHc-----CCCEEEEEecCCCCCCCCC-------
Confidence            45568999999999753       2468889999999999999998543     4689999999665432100       


Q ss_pred             cchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCC-
Q 022103          183 LEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG-  261 (302)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~-  261 (302)
                                                      |.....|+.+|++++.+++       ..||+++.|+||.+.+++... 
T Consensus       141 --------------------------------~~~~~~Y~~sK~~~e~~~~-------~~gi~~~~lrpg~v~~~~~~~~  181 (236)
T 3e8x_A          141 --------------------------------PMNMRHYLVAKRLADDELK-------RSSLDYTIVRPGPLSNEESTGK  181 (236)
T ss_dssp             --------------------------------CGGGHHHHHHHHHHHHHHH-------HSSSEEEEEEECSEECSCCCSE
T ss_pred             --------------------------------hhhhhhHHHHHHHHHHHHH-------HCCCCEEEEeCCcccCCCCCCe
Confidence                                            0224789999999999876       368999999999999987543 


Q ss_pred             ----------CCCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCc
Q 022103          262 ----------QGSHTADEAADVGARLLLLHPQQLPTAKFYIGLDP  296 (302)
Q Consensus       262 ----------~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  296 (302)
                                .....++++|..++.++.. +.  ..|..|...++
T Consensus       182 ~~~~~~~~~~~~~i~~~Dva~~~~~~~~~-~~--~~g~~~~v~~~  223 (236)
T 3e8x_A          182 VTVSPHFSEITRSITRHDVAKVIAELVDQ-QH--TIGKTFEVLNG  223 (236)
T ss_dssp             EEEESSCSCCCCCEEHHHHHHHHHHHTTC-GG--GTTEEEEEEEC
T ss_pred             EEeccCCCcccCcEeHHHHHHHHHHHhcC-cc--ccCCeEEEeCC
Confidence                      2346799999999999873 22  56777766554

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.91  E-value=5.3e-23  Score=191.44  Aligned_cols=206  Identities=16%  Similarity=0.154  Sum_probs=165.7

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHc-CC-EEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHh
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAEL-GL-TVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKS  103 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~-G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~  103 (302)
                      ..+++|++|||||+|+||++++++|+++ |+ +|++++|+..+.+...+++.  ..++.++.+|++|.+++.++++    
T Consensus        17 ~~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~--~~~v~~~~~Dl~d~~~l~~~~~----   90 (344)
T 2gn4_A           17 NMLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFN--DPRMRFFIGDVRDLERLNYALE----   90 (344)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHC--CTTEEEEECCTTCHHHHHHHTT----
T ss_pred             HhhCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhc--CCCEEEEECCCCCHHHHHHHHh----
Confidence            3477899999999999999999999999 98 99999999888777776664  2478999999999998887765    


Q ss_pred             hCCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCccccccc
Q 022103          104 NFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSIL  183 (302)
Q Consensus       104 ~~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~  183 (302)
                         .+|+|||+||....+   .....+.+.+++|+.++.++++++.+.     +.++||++||..+..+           
T Consensus        91 ---~~D~Vih~Aa~~~~~---~~~~~~~~~~~~Nv~gt~~l~~aa~~~-----~v~~~V~~SS~~~~~p-----------  148 (344)
T 2gn4_A           91 ---GVDICIHAAALKHVP---IAEYNPLECIKTNIMGASNVINACLKN-----AISQVIALSTDKAANP-----------  148 (344)
T ss_dssp             ---TCSEEEECCCCCCHH---HHHHSHHHHHHHHHHHHHHHHHHHHHT-----TCSEEEEECCGGGSSC-----------
T ss_pred             ---cCCEEEECCCCCCCC---chhcCHHHHHHHHHHHHHHHHHHHHhC-----CCCEEEEecCCccCCC-----------
Confidence               689999999976432   123445689999999999999999874     4689999999655321           


Q ss_pred             chhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCC---
Q 022103          184 EDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ---  260 (302)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~---  260 (302)
                                                        ...|++||++.+.++++++.++++.|+++++|.||.+.++...   
T Consensus       149 ----------------------------------~~~Y~~sK~~~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~~~~i~  194 (344)
T 2gn4_A          149 ----------------------------------INLYGATKLCSDKLFVSANNFKGSSQTQFSVVRYGNVVGSRGSVVP  194 (344)
T ss_dssp             ----------------------------------CSHHHHHHHHHHHHHHHGGGCCCSSCCEEEEECCCEETTCTTSHHH
T ss_pred             ----------------------------------ccHHHHHHHHHHHHHHHHHHHhCCCCcEEEEEEeccEECCCCCHHH
Confidence                                              2579999999999999999988888999999999999875311   


Q ss_pred             -----------CC---------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          261 -----------GQ---------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       261 -----------~~---------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                                 ..         ....++++|..++.++..+    ..|.+|...++.
T Consensus       195 ~~~~~~~~g~~~~~i~~~~~~r~~i~v~D~a~~v~~~l~~~----~~g~~~~~~~~~  247 (344)
T 2gn4_A          195 FFKKLVQNKASEIPITDIRMTRFWITLDEGVSFVLKSLKRM----HGGEIFVPKIPS  247 (344)
T ss_dssp             HHHHHHHHTCCCEEESCTTCEEEEECHHHHHHHHHHHHHHC----CSSCEEEECCCE
T ss_pred             HHHHHHHcCCCceEEeCCCeEEeeEEHHHHHHHHHHHHhhc----cCCCEEecCCCc
Confidence                       00         1267899999999998742    257777766653

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.89  E-value=3.4e-22  Score=183.69  Aligned_cols=238  Identities=16%  Similarity=0.097  Sum_probs=165.8

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhC-CCceeEE-EeeCCCHHHHHHHHHHHHhh
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEK-GLPVNFF-QLDVSDPSSIEAFVSWFKSN  104 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~-~~~~~~~-~~Dlt~~~~~~~~~~~~~~~  104 (302)
                      .++++++|||||+|+||++++++|+++|++|++++|+.++.+...+.+... +.++.++ .+|++|.+++.++++     
T Consensus         8 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   82 (342)
T 1y1p_A            8 LPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIK-----   82 (342)
T ss_dssp             SCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTT-----
T ss_pred             CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHc-----
Confidence            467899999999999999999999999999999999988776665554321 3467888 799999988766654     


Q ss_pred             CCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccc
Q 022103          105 FAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILE  184 (302)
Q Consensus       105 ~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~  184 (302)
                        .+|+|||+||.....      +++++.+++|+.++.++++++.+.   . +.++||++||........... .....+
T Consensus        83 --~~d~vih~A~~~~~~------~~~~~~~~~n~~g~~~ll~~~~~~---~-~~~~iv~~SS~~~~~~~~~~~-~~~~~~  149 (342)
T 1y1p_A           83 --GAAGVAHIASVVSFS------NKYDEVVTPAIGGTLNALRAAAAT---P-SVKRFVLTSSTVSALIPKPNV-EGIYLD  149 (342)
T ss_dssp             --TCSEEEECCCCCSCC------SCHHHHHHHHHHHHHHHHHHHHTC---T-TCCEEEEECCGGGTCCCCTTC-CCCEEC
T ss_pred             --CCCEEEEeCCCCCCC------CCHHHHHHHHHHHHHHHHHHHHhC---C-CCcEEEEeccHHHhcCCCCCC-CCcccC
Confidence              689999999975422      246779999999999999998752   2 468999999987653211100 001122


Q ss_pred             hhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC--
Q 022103          185 DEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ--  262 (302)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~--  262 (302)
                      ++.+.....+..       ..+..   ...+.+...|+.||++.+.+++.++.+++. ++++++|+||.+.+++....  
T Consensus       150 E~~~~~~~~~~~-------~~~~~---~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~-~~~~~~~rp~~v~g~~~~~~~~  218 (342)
T 1y1p_A          150 EKSWNLESIDKA-------KTLPE---SDPQKSLWVYAASKTEAELAAWKFMDENKP-HFTLNAVLPNYTIGTIFDPETQ  218 (342)
T ss_dssp             TTCCCHHHHHHH-------HHSCT---TSTTHHHHHHHHHHHHHHHHHHHHHHHHCC-SSEEEEEEESEEECCCSCTTTC
T ss_pred             ccccCchhhhhh-------ccccc---cccccchHHHHHHHHHHHHHHHHHHHhcCC-CceEEEEcCCceECCCCCCCCC
Confidence            333322211100       00000   000123467999999999999999999865 89999999999999875421  


Q ss_pred             --------------------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCc
Q 022103          263 --------------------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDP  296 (302)
Q Consensus       263 --------------------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  296 (302)
                                                ....++++|..++.++..+   ...|..+...+.
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~---~~~g~~~~~~g~  275 (342)
T 1y1p_A          219 SGSTSGWMMSLFNGEVSPALALMPPQYYVSAVDIGLLHLGCLVLP---QIERRRVYGTAG  275 (342)
T ss_dssp             CCHHHHHHHHHHTTCCCHHHHTCCSEEEEEHHHHHHHHHHHHHCT---TCCSCEEEECCE
T ss_pred             CccHHHHHHHHHcCCCccccccCCcCCEeEHHHHHHHHHHHHcCc---ccCCceEEEeCC
Confidence                                      1155799999998888632   235654444443

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.88  E-value=4.4e-22  Score=183.40  Aligned_cols=183  Identities=17%  Similarity=0.106  Sum_probs=140.5

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhC-CCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEK-GLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      .+++||||||+|+||++++++|+++|++|++++|+.++.....+.+... +..+.++.+|++|.+++.+++++     +.
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~   78 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDA-----HP   78 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHH-----SC
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhc-----cC
Confidence            4679999999999999999999999999999999876665555555432 45788999999999999998886     37


Q ss_pred             ccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhh
Q 022103          108 LDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEE  187 (302)
Q Consensus       108 id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~  187 (302)
                      +|+|||+||.....   ...+..++.+++|+.++.++++++..    . +.++||++||...+......+          
T Consensus        79 ~d~vih~A~~~~~~---~~~~~~~~~~~~n~~~~~~l~~~~~~----~-~~~~iv~~SS~~~~g~~~~~~----------  140 (341)
T 3enk_A           79 ITAAIHFAALKAVG---ESVAKPIEYYRNNLDSLLSLLRVMRE----R-AVKRIVFSSSATVYGVPERSP----------  140 (341)
T ss_dssp             CCEEEECCCCCCHH---HHHHCHHHHHHHHHHHHHHHHHHHHH----T-TCCEEEEEEEGGGBCSCSSSS----------
T ss_pred             CcEEEECccccccC---ccccChHHHHHHHHHHHHHHHHHHHh----C-CCCEEEEEecceEecCCCCCC----------
Confidence            99999999986432   23345567899999999998887643    3 467999999976542211110          


Q ss_pred             hcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCC
Q 022103          188 LSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTS  257 (302)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~  257 (302)
                                           ..+...+.+...|+.||++.+.+++.++.++.  +++++.+.|+.+..+
T Consensus       141 ---------------------~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~--~~~~~~lRp~~v~G~  187 (341)
T 3enk_A          141 ---------------------IDETFPLSATNPYGQTKLMAEQILRDVEAADP--SWRVATLRYFNPVGA  187 (341)
T ss_dssp             ---------------------BCTTSCCBCSSHHHHHHHHHHHHHHHHHHHCT--TCEEEEEEECEEECC
T ss_pred             ---------------------CCCCCCCCCCChhHHHHHHHHHHHHHHhhcCC--CceEEEEeeccccCC
Confidence                                 00111223357899999999999999999853  599999999998776

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.88  E-value=1.1e-21  Score=170.59  Aligned_cols=188  Identities=12%  Similarity=0.086  Sum_probs=141.6

Q ss_pred             cEEEEeCCCchHHHHHHHHHH-HcCCEEEEEecChh-hHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCc
Q 022103           31 TIAIVTGANKGIGFALVKRLA-ELGLTVILTARDVE-RGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAAL  108 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~-~~G~~V~l~~r~~~-~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~i  108 (302)
                      |+++||||+|+||+++++.|+ ++|++|++++|+.+ ++++..    ..+..+.++.+|++|.++++++++       .+
T Consensus         6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (221)
T 3r6d_A            6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEI----IDHERVTVIEGSFQNPGXLEQAVT-------NA   74 (221)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHH----HTSTTEEEEECCTTCHHHHHHHHT-------TC
T ss_pred             EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhc----cCCCceEEEECCCCCHHHHHHHHc-------CC
Confidence            789999999999999999999 89999999999987 554433    234578999999999999988876       68


Q ss_pred             cEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhh
Q 022103          109 DILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEEL  188 (302)
Q Consensus       109 d~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  188 (302)
                      |+||||+|..                  |+.     ++.+++.|++. +.++||++||..+..+.+..            
T Consensus        75 d~vv~~ag~~------------------n~~-----~~~~~~~~~~~-~~~~iv~iSs~~~~~~~~~~------------  118 (221)
T 3r6d_A           75 EVVFVGAMES------------------GSD-----MASIVKALSRX-NIRRVIGVSMAGLSGEFPVA------------  118 (221)
T ss_dssp             SEEEESCCCC------------------HHH-----HHHHHHHHHHT-TCCEEEEEEETTTTSCSCHH------------
T ss_pred             CEEEEcCCCC------------------Chh-----HHHHHHHHHhc-CCCeEEEEeeceecCCCCcc------------
Confidence            9999999963                  222     77788888776 56899999998876432210            


Q ss_pred             cHHHHHHHHHHHHhhhccCCCCCCCCCcccc-cchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCC-CCCCC----
Q 022103          189 SEEQIERFVGLFLQSVKDGTWKSQGWPEIWT-DYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTS-MTQGQ----  262 (302)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~-~~~~~----  262 (302)
                          ...+..                 +... .|+.+|.+++.+.+.       .||+++.|+||++.++ +....    
T Consensus       119 ----~~~~~~-----------------~~~~~~y~~~K~~~e~~~~~-------~~i~~~~vrpg~v~~~~~~~~~~~~~  170 (221)
T 3r6d_A          119 ----LEKWTF-----------------DNLPISYVQGERQARNVLRE-------SNLNYTILRLTWLYNDPEXTDYELIP  170 (221)
T ss_dssp             ----HHHHHH-----------------HTSCHHHHHHHHHHHHHHHH-------SCSEEEEEEECEEECCTTCCCCEEEC
T ss_pred             ----cccccc-----------------cccccHHHHHHHHHHHHHHh-------CCCCEEEEechhhcCCCCCcceeecc
Confidence                000000                 0012 699999999988753       6899999999999988 32221    


Q ss_pred             -------CCCCHHHHHHHHHHHh--hcCCCCCCCcceeecC
Q 022103          263 -------GSHTADEAADVGARLL--LLHPQQLPTAKFYIGL  294 (302)
Q Consensus       263 -------~~~~~~~~a~~~~~l~--~~~~~~~~~G~~~~~~  294 (302)
                             ...+++++|..+++++  . ++..++++.+.+..
T Consensus       171 ~~~~~~~~~~~~~dvA~~~~~l~~~~-~~~~~~~~~~~i~~  210 (221)
T 3r6d_A          171 EGAQFNDAQVSREAVVKAIFDILHAA-DETPFHRTSIGVGE  210 (221)
T ss_dssp             TTSCCCCCEEEHHHHHHHHHHHHTCS-CCGGGTTEEEEEEC
T ss_pred             CCccCCCceeeHHHHHHHHHHHHHhc-ChhhhhcceeeecC
Confidence                   1356899999999999  7 45556666666553

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.88  E-value=6.2e-22  Score=182.12  Aligned_cols=221  Identities=20%  Similarity=0.128  Sum_probs=158.3

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHH-HHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQ-RAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~-~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      |++++++||||+|+||++++++|+++|++|++++|+.++.+ ...+.+. ...++.++.+|++|.+++.++++.+     
T Consensus         1 m~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~-----   74 (345)
T 2z1m_A            1 MSGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELG-IENDVKIIHMDLLEFSNIIRTIEKV-----   74 (345)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTT-CTTTEEECCCCTTCHHHHHHHHHHH-----
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhcc-ccCceeEEECCCCCHHHHHHHHHhc-----
Confidence            45789999999999999999999999999999999876532 1222221 1246888999999999999998876     


Q ss_pred             CccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchh
Q 022103          107 ALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDE  186 (302)
Q Consensus       107 ~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~  186 (302)
                      ++|+|||+||....   +.+.++++..+++|+.++.++++++...   . ..++||++||...+......+         
T Consensus        75 ~~d~vih~A~~~~~---~~~~~~~~~~~~~Nv~g~~~l~~a~~~~---~-~~~~iv~~SS~~vyg~~~~~~---------  138 (345)
T 2z1m_A           75 QPDEVYNLAAQSFV---GVSFEQPILTAEVDAIGVLRILEALRTV---K-PDTKFYQASTSEMFGKVQEIP---------  138 (345)
T ss_dssp             CCSEEEECCCCCCH---HHHTTSHHHHHHHHTHHHHHHHHHHHHH---C-TTCEEEEEEEGGGGCSCSSSS---------
T ss_pred             CCCEEEECCCCcch---hhhhhCHHHHHHHHHHHHHHHHHHHHHh---C-CCceEEEEechhhcCCCCCCC---------
Confidence            68999999997532   1234668889999999999999999853   1 137999999986542211100         


Q ss_pred             hhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHcc---CCCcEEEEeecCcccCCCCC---
Q 022103          187 ELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYE---GEGISVNSYCPGFTQTSMTQ---  260 (302)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~---~~gI~V~~v~PG~v~T~~~~---  260 (302)
                                            ..+...+.+...|+.||++.+.+++.++.+++   ..++.++.+.||.+.|.+..   
T Consensus       139 ----------------------~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~~~  196 (345)
T 2z1m_A          139 ----------------------QTEKTPFYPRSPYAVAKLFGHWITVNYREAYNMFACSGILFNHESPLRGIEFVTRKIT  196 (345)
T ss_dssp             ----------------------BCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHH
T ss_pred             ----------------------CCccCCCCCCChhHHHHHHHHHHHHHHHHHhCCceEeeeeeeecCCCCCCcchhHHHH
Confidence                                  00111123357899999999999999999864   23456678889877654310   


Q ss_pred             --------C-------------CCCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCc
Q 022103          261 --------G-------------QGSHTADEAADVGARLLLLHPQQLPTAKFYIGLDP  296 (302)
Q Consensus       261 --------~-------------~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  296 (302)
                              .             .....++++|..++.++.. +.   .+.+.+..+.
T Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~a~~~~~~~-~~---~~~~~i~~~~  249 (345)
T 2z1m_A          197 YSLARIKYGLQDKLVLGNLNAKRDWGYAPEYVEAMWLMMQQ-PE---PDDYVIATGE  249 (345)
T ss_dssp             HHHHHHHTTSCSCEEESCTTCEECCEEHHHHHHHHHHHHTS-SS---CCCEEECCSC
T ss_pred             HHHHHHHcCCCCeeeeCCCCceeeeEEHHHHHHHHHHHHhC-CC---CceEEEeCCC
Confidence                    0             0136689999999999863 22   2556555554

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.88  E-value=8.1e-23  Score=179.66  Aligned_cols=179  Identities=17%  Similarity=0.054  Sum_probs=141.6

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCC--EEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhh
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGL--TVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSN  104 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~--~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~  104 (302)
                      .+++++++||||+|+||++++++|+++|+  +|++++|+.++.+...      ...+.++.+|++|.+++.++++     
T Consensus        15 ~m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~------~~~~~~~~~D~~d~~~~~~~~~-----   83 (242)
T 2bka_A           15 RMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA------YKNVNQEVVDFEKLDDYASAFQ-----   83 (242)
T ss_dssp             HHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG------GGGCEEEECCGGGGGGGGGGGS-----
T ss_pred             hhcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccc------cCCceEEecCcCCHHHHHHHhc-----
Confidence            46789999999999999999999999999  9999999876533211      1257889999999988876654     


Q ss_pred             CCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccc
Q 022103          105 FAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILE  184 (302)
Q Consensus       105 ~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~  184 (302)
                        .+|+||||||....      .+.++..+++|+.++.++++++..    . +.++||++||..+..+            
T Consensus        84 --~~d~vi~~ag~~~~------~~~~~~~~~~n~~~~~~~~~~~~~----~-~~~~iv~~SS~~~~~~------------  138 (242)
T 2bka_A           84 --GHDVGFCCLGTTRG------KAGAEGFVRVDRDYVLKSAELAKA----G-GCKHFNLLSSKGADKS------------  138 (242)
T ss_dssp             --SCSEEEECCCCCHH------HHHHHHHHHHHTHHHHHHHHHHHH----T-TCCEEEEECCTTCCTT------------
T ss_pred             --CCCEEEECCCcccc------cCCcccceeeeHHHHHHHHHHHHH----C-CCCEEEEEccCcCCCC------------
Confidence              68999999997522      245788999999999999887644    3 4689999999876521            


Q ss_pred             hhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCc-EEEEeecCcccCCCCCC--
Q 022103          185 DEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGI-SVNSYCPGFTQTSMTQG--  261 (302)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI-~V~~v~PG~v~T~~~~~--  261 (302)
                                                      ....|+++|++++.+++.+       ++ +++.|+||.+.|++...  
T Consensus       139 --------------------------------~~~~Y~~sK~~~e~~~~~~-------~~~~~~~vrpg~v~~~~~~~~~  179 (242)
T 2bka_A          139 --------------------------------SNFLYLQVKGEVEAKVEEL-------KFDRYSVFRPGVLLCDRQESRP  179 (242)
T ss_dssp             --------------------------------CSSHHHHHHHHHHHHHHTT-------CCSEEEEEECCEEECTTGGGSH
T ss_pred             --------------------------------CcchHHHHHHHHHHHHHhc-------CCCCeEEEcCceecCCCCCCcH
Confidence                                            1256999999999998754       45 89999999999986321  


Q ss_pred             -----------C-------CCCCHHHHHHHHHHHhhc
Q 022103          262 -----------Q-------GSHTADEAADVGARLLLL  280 (302)
Q Consensus       262 -----------~-------~~~~~~~~a~~~~~l~~~  280 (302)
                                 .       ...+++++|..+++++..
T Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~  216 (242)
T 2bka_A          180 GEWLVRKFFGSLPDSWASGHSVPVVTVVRAMLNNVVR  216 (242)
T ss_dssp             HHHHHHHHHCSCCTTGGGGTEEEHHHHHHHHHHHHTS
T ss_pred             HHHHHHHhhcccCccccCCcccCHHHHHHHHHHHHhC
Confidence                       0       125789999999999873

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=99.88  E-value=1.6e-21  Score=178.23  Aligned_cols=215  Identities=17%  Similarity=0.104  Sum_probs=157.7

Q ss_pred             ccccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHh
Q 022103           24 TKWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKS  103 (302)
Q Consensus        24 ~~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~  103 (302)
                      +...-+-+++|||||+|+||++++++|+++|++|++++|+... +.    +     ++.++.+|++|.+++.++++.   
T Consensus         6 ~~~~~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~----l-----~~~~~~~Dl~d~~~~~~~~~~---   72 (321)
T 2pk3_A            6 HHHHHGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL----P-----NVEMISLDIMDSQRVKKVISD---   72 (321)
T ss_dssp             -------CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC----T-----TEEEEECCTTCHHHHHHHHHH---
T ss_pred             cccccCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc----c-----eeeEEECCCCCHHHHHHHHHh---
Confidence            3444566899999999999999999999999999999998754 21    1     578899999999999988876   


Q ss_pred             hCCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCccccccc
Q 022103          104 NFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSIL  183 (302)
Q Consensus       104 ~~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~  183 (302)
                        +++|+|||+||.....   .+.++++..+++|+.++.++++++ +.+.   +.++||++||...+......       
T Consensus        73 --~~~d~vih~A~~~~~~---~~~~~~~~~~~~Nv~g~~~l~~a~-~~~~---~~~~iv~~SS~~v~g~~~~~-------  136 (321)
T 2pk3_A           73 --IKPDYIFHLAAKSSVK---DSWLNKKGTFSTNVFGTLHVLDAV-RDSN---LDCRILTIGSSEEYGMILPE-------  136 (321)
T ss_dssp             --HCCSEEEECCSCCCHH---HHTTCHHHHHHHHHHHHHHHHHHH-HHHT---CCCEEEEEEEGGGTBSCCGG-------
T ss_pred             --cCCCEEEEcCcccchh---hhhhcHHHHHHHHHHHHHHHHHHH-HHhC---CCCeEEEEccHHhcCCCCCC-------
Confidence              3699999999975421   234467889999999999999999 5442   36899999998754321000       


Q ss_pred             chhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC-
Q 022103          184 EDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ-  262 (302)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~-  262 (302)
                                            .....+...+.+...|+.+|++.+.+++.++.+   .|++++.|.||.+.++..... 
T Consensus       137 ----------------------~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gi~~~ilrp~~v~g~~~~~~~  191 (321)
T 2pk3_A          137 ----------------------ESPVSEENQLRPMSPYGVSKASVGMLARQYVKA---YGMDIIHTRTFNHIGPGQSLGF  191 (321)
T ss_dssp             ----------------------GCSBCTTSCCBCCSHHHHHHHHHHHHHHHHHHH---HCCEEEEEEECEEECTTCCTTS
T ss_pred             ----------------------CCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHH---cCCCEEEEEeCcccCcCCCCCc
Confidence                                  000011112234578999999999999999987   489999999999988764310 


Q ss_pred             --------------C----------------CCCHHHHHHHHHHHhhcCCCCCCCcceeecCCc
Q 022103          263 --------------G----------------SHTADEAADVGARLLLLHPQQLPTAKFYIGLDP  296 (302)
Q Consensus       263 --------------~----------------~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  296 (302)
                                    +                ...++++|..++.++..+    ..|..|...++
T Consensus       192 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~----~~g~~~~i~~~  251 (321)
T 2pk3_A          192 VTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTDVRDIVQAYWLLSQYG----KTGDVYNVCSG  251 (321)
T ss_dssp             HHHHHHHHHHHHHTTSSCSEEEESCSSCEEEEEEHHHHHHHHHHHHHHC----CTTCEEEESCS
T ss_pred             hHHHHHHHHHHHhcCCCCCeEEeCCCCcEEeeEEHHHHHHHHHHHHhCC----CCCCeEEeCCC
Confidence                          1                156899999999998743    34666666554

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.87  E-value=1.4e-21  Score=172.00  Aligned_cols=203  Identities=17%  Similarity=0.100  Sum_probs=151.0

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHc--CCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAEL--GLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~--G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      +++++++||||+|+||++++++|+++  |++|++++|+.++.+..       +..+.++.+|++|.+++.++++      
T Consensus         2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~-------~~~~~~~~~D~~d~~~~~~~~~------   68 (253)
T 1xq6_A            2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI-------GGEADVFIGDITDADSINPAFQ------   68 (253)
T ss_dssp             CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT-------TCCTTEEECCTTSHHHHHHHHT------
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc-------CCCeeEEEecCCCHHHHHHHHc------
Confidence            45789999999999999999999999  89999999997665432       3467889999999999988876      


Q ss_pred             CCccEEEEcCCCCCC-C---------CCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCccccccc
Q 022103          106 AALDILVNNAGVSFN-D---------IYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVR  175 (302)
Q Consensus       106 g~id~lv~~aG~~~~-~---------~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~  175 (302)
                       .+|+||||||.... .         ..+.+.+.++..+++|+.++.++++++...     +.++||++||..+..+...
T Consensus        69 -~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~~~iv~~SS~~~~~~~~~  142 (253)
T 1xq6_A           69 -GIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA-----GVKHIVVVGSMGGTNPDHP  142 (253)
T ss_dssp             -TCSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH-----TCSEEEEEEETTTTCTTCG
T ss_pred             -CCCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHc-----CCCEEEEEcCccCCCCCCc
Confidence             58999999997532 1         122234455678899999999999888653     3579999999876432111


Q ss_pred             CcccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCccc
Q 022103          176 NPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQ  255 (302)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~  255 (302)
                      ..                                     +.....|+.+|.+++.+++.       .|++++.|+||.+.
T Consensus       143 ~~-------------------------------------~~~~~~y~~sK~~~e~~~~~-------~~i~~~~vrpg~v~  178 (253)
T 1xq6_A          143 LN-------------------------------------KLGNGNILVWKRKAEQYLAD-------SGTPYTIIRAGGLL  178 (253)
T ss_dssp             GG-------------------------------------GGGGCCHHHHHHHHHHHHHT-------SSSCEEEEEECEEE
T ss_pred             cc-------------------------------------cccchhHHHHHHHHHHHHHh-------CCCceEEEecceee
Confidence            00                                     00113588899999988752       68999999999999


Q ss_pred             CCCCCCC---------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCc
Q 022103          256 TSMTQGQ---------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDP  296 (302)
Q Consensus       256 T~~~~~~---------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  296 (302)
                      ++.....               ....++++|..++.++.. +.  ..|..|...++
T Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dva~~~~~~~~~-~~--~~g~~~~i~~~  231 (253)
T 1xq6_A          179 DKEGGVRELLVGKDDELLQTDTKTVPRADVAEVCIQALLF-EE--AKNKAFDLGSK  231 (253)
T ss_dssp             CSCSSSSCEEEESTTGGGGSSCCEEEHHHHHHHHHHHTTC-GG--GTTEEEEEEEC
T ss_pred             cCCcchhhhhccCCcCCcCCCCcEEcHHHHHHHHHHHHcC-cc--ccCCEEEecCC
Confidence            8763211               125789999999999863 22  35766666554

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=99.87  E-value=4.7e-21  Score=176.54  Aligned_cols=233  Identities=13%  Similarity=0.077  Sum_probs=163.0

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHcCCEEEEEecCh-hhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCcc
Q 022103           31 TIAIVTGANKGIGFALVKRLAELGLTVILTARDV-ERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALD  109 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~-~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id  109 (302)
                      +++|||||+|+||++++++|+++|++|++++|+. .......+.+... .++.++.+|++|.+++.++++..     ++|
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~-~~~~~~~~Dl~d~~~~~~~~~~~-----~~d   75 (347)
T 1orr_A            2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSL-GNFEFVHGDIRNKNDVTRLITKY-----MPD   75 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTT-CCCEEEECCTTCHHHHHHHHHHH-----CCS
T ss_pred             cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhccC-CceEEEEcCCCCHHHHHHHHhcc-----CCC
Confidence            4799999999999999999999999999999853 2333334444432 36889999999999999988863     699


Q ss_pred             EEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhhc
Q 022103          110 ILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELS  189 (302)
Q Consensus       110 ~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~  189 (302)
                      +|||+||....   ..+.++++..+++|+.++.++++++.+...    .++||++||...+......+..   .++.+|.
T Consensus        76 ~vih~A~~~~~---~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~----~~~iv~~SS~~v~g~~~~~~~~---e~~~~~~  145 (347)
T 1orr_A           76 SCFHLAGQVAM---TTSIDNPCMDFEINVGGTLNLLEAVRQYNS----NCNIIYSSTNKVYGDLEQYKYN---ETETRYT  145 (347)
T ss_dssp             EEEECCCCCCH---HHHHHCHHHHHHHHHHHHHHHHHHHHHHCT----TCEEEEEEEGGGGTTCTTSCEE---ECSSCEE
T ss_pred             EEEECCcccCh---hhhhhCHHHHHHHHHHHHHHHHHHHHHhCC----CceEEEeccHHHhCCCCcCCcc---ccccccc
Confidence            99999997532   134567888999999999999999988642    2699999997654322111000   0000000


Q ss_pred             HHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCC--------
Q 022103          190 EEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG--------  261 (302)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~--------  261 (302)
                      ..            .......+...+.+...|+.+|++.+.+++.++.++   |+++++|.||.+.++....        
T Consensus       146 ~~------------~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~g~~~~~~~~~~~~~  210 (347)
T 1orr_A          146 CV------------DKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIF---GLNTVVFRHSSMYGGRQFATYDQGWVG  210 (347)
T ss_dssp             ET------------TCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTCCCBTTBCHHH
T ss_pred             cc------------ccccCccccCCCCCCCchHHHHHHHHHHHHHHHHHh---CCcEEEEccCceeCcCCCCCCcCcHHH
Confidence            00            000000011112345789999999999999999884   8999999999999886421        


Q ss_pred             ----------------C---C-------CCCHHHHHHHHHHHhhcCCCCCCCcceeecCCc
Q 022103          262 ----------------Q---G-------SHTADEAADVGARLLLLHPQQLPTAKFYIGLDP  296 (302)
Q Consensus       262 ----------------~---~-------~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  296 (302)
                                      .   +       ...++++|..++.++..  .....|..|...++
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~--~~~~~g~~~~v~~~  269 (347)
T 1orr_A          211 WFCQKAVEIKNGINKPFTISGNGKQVRDVLHAEDMISLYFTALAN--VSKIRGNAFNIGGT  269 (347)
T ss_dssp             HHHHHHHHHHTTCCCCEEEESSSCCEEECEEHHHHHHHHHHHHHT--HHHHTTCEEEESSC
T ss_pred             HHHHHHHhCcccCCCCeEEecCCcceEeeEEHHHHHHHHHHHHhc--cccCCCCEEEeCCC
Confidence                            0   0       23689999999988762  12356877777665

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=99.87  E-value=2.8e-21  Score=179.30  Aligned_cols=220  Identities=15%  Similarity=0.048  Sum_probs=161.8

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChh----hHHHHHHHHhhC-CCceeEEEeeCCCHHHHHHHHHH
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVE----RGQRAVESLSEK-GLPVNFFQLDVSDPSSIEAFVSW  100 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~----~~~~~~~~l~~~-~~~~~~~~~Dlt~~~~~~~~~~~  100 (302)
                      +++++++++||||+|+||+++++.|+++|++|++++|+..    .++...+++... +.++.++.+|++|.+++.++++ 
T Consensus        23 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-  101 (352)
T 1sb8_A           23 LPAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA-  101 (352)
T ss_dssp             HHHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT-
T ss_pred             cCccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhc-
Confidence            4577889999999999999999999999999999999753    333333332211 2468899999999998888776 


Q ss_pred             HHhhCCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccc
Q 022103          101 FKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIK  180 (302)
Q Consensus       101 ~~~~~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~  180 (302)
                            .+|+|||+||.....   .+.++++..+++|+.++.++++++.+.     +.++||++||..........+   
T Consensus       102 ------~~d~vih~A~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~~~~-----~~~~~v~~SS~~~~~~~~~~~---  164 (352)
T 1sb8_A          102 ------GVDYVLHQAALGSVP---RSINDPITSNATNIDGFLNMLIAARDA-----KVQSFTYAASSSTYGDHPGLP---  164 (352)
T ss_dssp             ------TCSEEEECCSCCCHH---HHHHCHHHHHHHHTHHHHHHHHHHHHT-----TCSEEEEEEEGGGGTTCCCSS---
T ss_pred             ------CCCEEEECCcccCch---hhhhCHHHHHHHHHHHHHHHHHHHHHc-----CCCEEEEeccHHhcCCCCCCC---
Confidence                  689999999975321   245678889999999999999998763     468999999987653322111   


Q ss_pred             cccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCC
Q 022103          181 SILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ  260 (302)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~  260 (302)
                                                  ..+...+.+...|+.+|++.+.+++.++.++   |++++.|.||.+.++...
T Consensus       165 ----------------------------~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---g~~~~ilRp~~v~G~~~~  213 (352)
T 1sb8_A          165 ----------------------------KVEDTIGKPLSPYAVTKYVNELYADVFSRCY---GFSTIGLRYFNVFGRRQD  213 (352)
T ss_dssp             ----------------------------BCTTCCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECCEECTTCC
T ss_pred             ----------------------------CCCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEEECceeCcCCC
Confidence                                        0011112334789999999999999999874   799999999999887643


Q ss_pred             CC------------------------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCc
Q 022103          261 GQ------------------------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDP  296 (302)
Q Consensus       261 ~~------------------------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  296 (302)
                      ..                              ..+..+++|..++.++.. .. ...|..|...++
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~-~~-~~~~~~~ni~~~  277 (352)
T 1sb8_A          214 PNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAATA-GL-DARNQVYNIAVG  277 (352)
T ss_dssp             CCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTC-CG-GGCSEEEEESCS
T ss_pred             CCcchhhHHHHHHHHHHCCCCcEEeCCCCceEeeEEHHHHHHHHHHHHhc-cc-cCCCceEEeCCC
Confidence            21                              124578999988888763 21 234666665544

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=99.87  E-value=2.9e-21  Score=177.59  Aligned_cols=215  Identities=15%  Similarity=0.107  Sum_probs=156.9

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcC--CEEEEEecChh--hHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhh
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELG--LTVILTARDVE--RGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSN  104 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G--~~V~l~~r~~~--~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~  104 (302)
                      ++.+++||||+|+||++++++|+++|  ++|++++|+..  ..+. .+.+. .+.++.++.+|++|.+++.+++.     
T Consensus         2 ~~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~-~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~-----   74 (336)
T 2hun_A            2 HSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPAN-LKDLE-DDPRYTFVKGDVADYELVKELVR-----   74 (336)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGG-GTTTT-TCTTEEEEECCTTCHHHHHHHHH-----
T ss_pred             CCCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhH-Hhhhc-cCCceEEEEcCCCCHHHHHHHhh-----
Confidence            34579999999999999999999997  89999998642  1111 11121 13478899999999999988873     


Q ss_pred             CCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccc
Q 022103          105 FAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILE  184 (302)
Q Consensus       105 ~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~  184 (302)
                        .+|+|||+||....   +.+.++++..+++|+.++.++++++.+.   . ..++||++||...+......+       
T Consensus        75 --~~d~vih~A~~~~~---~~~~~~~~~~~~~Nv~g~~~l~~a~~~~---~-~~~~iv~~SS~~vyg~~~~~~-------  138 (336)
T 2hun_A           75 --KVDGVVHLAAESHV---DRSISSPEIFLHSNVIGTYTLLESIRRE---N-PEVRFVHVSTDEVYGDILKGS-------  138 (336)
T ss_dssp             --TCSEEEECCCCCCH---HHHHHCTHHHHHHHHHHHHHHHHHHHHH---C-TTSEEEEEEEGGGGCCCSSSC-------
T ss_pred             --CCCEEEECCCCcCh---hhhhhCHHHHHHHHHHHHHHHHHHHHHh---C-CCcEEEEeccHHHHCCCCCCC-------
Confidence              78999999997532   1345667889999999999999999886   1 247999999976432211100       


Q ss_pred             hhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC--
Q 022103          185 DEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ--  262 (302)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~--  262 (302)
                                              ..+...+.+...|+.+|++.+.+++.++.+   .|++++.|+||.+.++.....  
T Consensus       139 ------------------------~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~v~g~~~~~~~~  191 (336)
T 2hun_A          139 ------------------------FTENDRLMPSSPYSATKAASDMLVLGWTRT---YNLNASITRCTNNYGPYQFPEKL  191 (336)
T ss_dssp             ------------------------BCTTBCCCCCSHHHHHHHHHHHHHHHHHHH---TTCEEEEEEECEEESTTCCTTSH
T ss_pred             ------------------------cCCCCCCCCCCccHHHHHHHHHHHHHHHHH---hCCCEEEEeeeeeeCcCCCcCch
Confidence                                    001111233478999999999999999988   489999999999998874311  


Q ss_pred             ------------------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          263 ------------------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       263 ------------------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                                              ....++++|..++.++.. .   ..|..|...++.
T Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~-~---~~g~~~~v~~~~  246 (336)
T 2hun_A          192 IPKTIIRASLGLKIPIYGTGKNVRDWLYVEDHVRAIELVLLK-G---ESREIYNISAGE  246 (336)
T ss_dssp             HHHHHHHHHTTCCEEEETC---CEEEEEHHHHHHHHHHHHHH-C---CTTCEEEECCSC
T ss_pred             HHHHHHHHHcCCCceEeCCCCceeeeEEHHHHHHHHHHHHhC-C---CCCCEEEeCCCC
Confidence                                    014579999999998863 2   257777766653

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.87  E-value=2e-21  Score=180.39  Aligned_cols=210  Identities=16%  Similarity=0.037  Sum_probs=159.1

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      .+++++|+||||+|+||++++++|+++|++|++++|+.++.+...+.+. .+.++.++.+|++|.+++.++++.+     
T Consensus         6 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~-----   79 (357)
T 1rkx_A            6 FWQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETAR-VADGMQSEIGDIRDQNKLLESIREF-----   79 (357)
T ss_dssp             HHTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTT-TTTTSEEEECCTTCHHHHHHHHHHH-----
T ss_pred             hhCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhc-cCCceEEEEccccCHHHHHHHHHhc-----
Confidence            3678899999999999999999999999999999998765544444433 2447889999999999999998876     


Q ss_pred             CccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchh
Q 022103          107 ALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDE  186 (302)
Q Consensus       107 ~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~  186 (302)
                      ++|+|||+||...   ...+.++++..+++|+.++.++++++.+.   . ..++||++||...+.......         
T Consensus        80 ~~d~vih~A~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~---~-~~~~~v~~SS~~vyg~~~~~~---------  143 (357)
T 1rkx_A           80 QPEIVFHMAAQPL---VRLSYSEPVETYSTNVMGTVYLLEAIRHV---G-GVKAVVNITSDKCYDNKEWIW---------  143 (357)
T ss_dssp             CCSEEEECCSCCC---HHHHHHCHHHHHHHHTHHHHHHHHHHHHH---C-CCCEEEEECCGGGBCCCCSSS---------
T ss_pred             CCCEEEECCCCcc---cccchhCHHHHHHHHHHHHHHHHHHHHHh---C-CCCeEEEecCHHHhCCCCcCC---------
Confidence            6999999999642   12345678899999999999999999763   1 358999999987542211100         


Q ss_pred             hhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHcc------CCCcEEEEeecCcccCCCCC
Q 022103          187 ELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYE------GEGISVNSYCPGFTQTSMTQ  260 (302)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~------~~gI~V~~v~PG~v~T~~~~  260 (302)
                                           +..+...+.+...|+.+|.+.+.+++.++.++.      +.|+++++|+||.+.++...
T Consensus       144 ---------------------~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~  202 (357)
T 1rkx_A          144 ---------------------GYRENEAMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDW  202 (357)
T ss_dssp             ---------------------CBCTTSCBCCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCC
T ss_pred             ---------------------CCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCC
Confidence                                 000111123357899999999999999999874      34899999999999987542


Q ss_pred             CC--------------------------CCCCHHHHHHHHHHHhh
Q 022103          261 GQ--------------------------GSHTADEAADVGARLLL  279 (302)
Q Consensus       261 ~~--------------------------~~~~~~~~a~~~~~l~~  279 (302)
                      ..                          ..+..+++|..++.++.
T Consensus       203 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~v~Dva~a~~~~~~  247 (357)
T 1rkx_A          203 ALDRIVPDILRAFEQSQPVIIRNPHAIRPWQHVLEPLSGYLLLAQ  247 (357)
T ss_dssp             CSSCHHHHHHHHHHTTCCEECSCTTCEECCEETHHHHHHHHHHHH
T ss_pred             ccccHHHHHHHHHhcCCCEEECCCCCeeccEeHHHHHHHHHHHHH
Confidence            10                          12456888888888765

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=99.87  E-value=2.4e-21  Score=178.97  Aligned_cols=222  Identities=15%  Similarity=0.082  Sum_probs=154.5

Q ss_pred             cccccCcEEEEeCCCchHHHHHHHHHHHcC--CEEEEEecChhh-HHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHH
Q 022103           25 KWWSKETIAIVTGANKGIGFALVKRLAELG--LTVILTARDVER-GQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWF  101 (302)
Q Consensus        25 ~~~~~~k~vlItGas~gIG~ala~~l~~~G--~~V~l~~r~~~~-~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~  101 (302)
                      .+.+++++|+||||+|+||.+++++|+++|  ++|++.+|.... .....+.+. ...++.++.+|++|.+++.++++..
T Consensus        19 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~   97 (346)
T 4egb_A           19 YFQSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQ-DHPNYYFVKGEIQNGELLEHVIKER   97 (346)
T ss_dssp             -----CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTTT-TCTTEEEEECCTTCHHHHHHHHHHH
T ss_pred             ccccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhhc-cCCCeEEEEcCCCCHHHHHHHHhhc
Confidence            345778999999999999999999999999  788888876421 111111111 1247899999999999999999864


Q ss_pred             HhhCCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCccccc
Q 022103          102 KSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKS  181 (302)
Q Consensus       102 ~~~~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~  181 (302)
                           ++|+|||+||.....   ...++++..+++|+.++.++++++...     +.++||++||...+......     
T Consensus        98 -----~~d~Vih~A~~~~~~---~~~~~~~~~~~~nv~~~~~ll~a~~~~-----~~~~~v~~SS~~vy~~~~~~-----  159 (346)
T 4egb_A           98 -----DVQVIVNFAAESHVD---RSIENPIPFYDTNVIGTVTLLELVKKY-----PHIKLVQVSTDEVYGSLGKT-----  159 (346)
T ss_dssp             -----TCCEEEECCCCC------------CHHHHHHTHHHHHHHHHHHHS-----TTSEEEEEEEGGGGCCCCSS-----
T ss_pred             -----CCCEEEECCcccchh---hhhhCHHHHHHHHHHHHHHHHHHHHhc-----CCCEEEEeCchHHhCCCCcC-----
Confidence                 689999999986432   345677889999999999999988654     45789999997654332111     


Q ss_pred             ccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCC
Q 022103          182 ILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG  261 (302)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~  261 (302)
                                               +...+...+.+...|+.+|.+.|.+++.++.+   .|++++.+.|+.+.++....
T Consensus       160 -------------------------~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~~~~  211 (346)
T 4egb_A          160 -------------------------GRFTEETPLAPNSPYSSSKASADMIALAYYKT---YQLPVIVTRCSNNYGPYQYP  211 (346)
T ss_dssp             -------------------------CCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHH---HCCCEEEEEECEEESTTCCT
T ss_pred             -------------------------CCcCCCCCCCCCChhHHHHHHHHHHHHHHHHH---hCCCEEEEeecceeCcCCCc
Confidence                                     01111112233478999999999999999987   48999999999998876422


Q ss_pred             C-------------------C-------CCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          262 Q-------------------G-------SHTADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       262 ~-------------------~-------~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                      .                   +       .+..+++|..++.++..+.    .|..|...++.
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~----~g~~~~i~~~~  269 (346)
T 4egb_A          212 EKLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVVLHKGR----VGEVYNIGGNN  269 (346)
T ss_dssp             TSHHHHHHHHHHTTCCCEEETTSCCEECEEEHHHHHHHHHHHHHHCC----TTCEEEECCSC
T ss_pred             cchHHHHHHHHHcCCCceeeCCCCeEEeeEEHHHHHHHHHHHHhcCC----CCCEEEECCCC
Confidence            1                   1       1447899999999987432    56666655543

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=99.87  E-value=3.4e-21  Score=178.31  Aligned_cols=221  Identities=15%  Similarity=0.067  Sum_probs=163.9

Q ss_pred             cccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCC-----CceeEEEeeCCCHHHHHHHHH
Q 022103           25 KWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKG-----LPVNFFQLDVSDPSSIEAFVS   99 (302)
Q Consensus        25 ~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~-----~~~~~~~~Dlt~~~~~~~~~~   99 (302)
                      .+.+++++||||||+|+||++++++|+++|++|++++|+..........+....     .++.++.+|++|.+++.++++
T Consensus        20 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   99 (351)
T 3ruf_A           20 QLIFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMK   99 (351)
T ss_dssp             HHHHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTT
T ss_pred             hCCCCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhc
Confidence            455778999999999999999999999999999999997654444444443321     478999999999998887776


Q ss_pred             HHHhhCCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCccc
Q 022103          100 WFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNI  179 (302)
Q Consensus       100 ~~~~~~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~  179 (302)
                             .+|+|||+||.....   .+.+++...+++|+.++.++++++...     +.++||++||...+......+  
T Consensus       100 -------~~d~Vih~A~~~~~~---~~~~~~~~~~~~nv~~~~~ll~a~~~~-----~~~~~v~~SS~~vyg~~~~~~--  162 (351)
T 3ruf_A          100 -------GVDHVLHQAALGSVP---RSIVDPITTNATNITGFLNILHAAKNA-----QVQSFTYAASSSTYGDHPALP--  162 (351)
T ss_dssp             -------TCSEEEECCCCCCHH---HHHHCHHHHHHHHTHHHHHHHHHHHHT-----TCSEEEEEEEGGGGTTCCCSS--
T ss_pred             -------CCCEEEECCccCCcc---hhhhCHHHHHHHHHHHHHHHHHHHHHc-----CCCEEEEEecHHhcCCCCCCC--
Confidence                   689999999975322   345667789999999999999988653     457999999986653322111  


Q ss_pred             ccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCC
Q 022103          180 KSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMT  259 (302)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~  259 (302)
                                                   ..+...+.+...|+.+|.+.+.+++.++.+   .|++++.+.|+.+..+..
T Consensus       163 -----------------------------~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~~  210 (351)
T 3ruf_A          163 -----------------------------KVEENIGNPLSPYAVTKYVNEIYAQVYART---YGFKTIGLRYFNVFGRRQ  210 (351)
T ss_dssp             -----------------------------BCTTCCCCCCSHHHHHHHHHHHHHHHHHHH---HCCCCEEEEECSEESTTC
T ss_pred             -----------------------------CccCCCCCCCChhHHHHHHHHHHHHHHHHH---hCCCEEEEeeCceeCcCC
Confidence                                         111111233478999999999999999988   489999999999987754


Q ss_pred             CCC------------------------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCc
Q 022103          260 QGQ------------------------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDP  296 (302)
Q Consensus       260 ~~~------------------------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  296 (302)
                      ...                              ..+..+++|..++.++.. .. ...|..|...++
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~-~~-~~~~~~~ni~~~  275 (351)
T 3ruf_A          211 DPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVIQMNILSALA-KD-SAKDNIYNVAVG  275 (351)
T ss_dssp             CCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTC-CG-GGCSEEEEESCS
T ss_pred             CCCcchhhHHHHHHHHHHcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHHhh-cc-ccCCCEEEeCCC
Confidence            321                              114579999999988763 22 235666655443

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.86  E-value=3.9e-21  Score=167.30  Aligned_cols=204  Identities=12%  Similarity=0.018  Sum_probs=154.3

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCccE
Q 022103           31 TIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDI  110 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id~  110 (302)
                      ++++||||+|+||+++++.|+++|++|++++|+.++.+.       ....+.++.+|++|.+++.++++       .+|+
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------~~~~~~~~~~Dl~d~~~~~~~~~-------~~d~   70 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKI-------ENEHLKVKKADVSSLDEVCEVCK-------GADA   70 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCC-------CCTTEEEECCCTTCHHHHHHHHT-------TCSE
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchh-------ccCceEEEEecCCCHHHHHHHhc-------CCCE
Confidence            689999999999999999999999999999999866432       12478999999999999988876       5899


Q ss_pred             EEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhhcH
Q 022103          111 LVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSE  190 (302)
Q Consensus       111 lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~  190 (302)
                      |||+||.....         .+.+++|+.++.++++++...     +.++||++||..+..+......     +      
T Consensus        71 vi~~a~~~~~~---------~~~~~~n~~~~~~l~~~~~~~-----~~~~~v~~Ss~~~~~~~~~~~~-----~------  125 (227)
T 3dhn_A           71 VISAFNPGWNN---------PDIYDETIKVYLTIIDGVKKA-----GVNRFLMVGGAGSLFIAPGLRL-----M------  125 (227)
T ss_dssp             EEECCCC---------------CCSHHHHHHHHHHHHHHHT-----TCSEEEEECCSTTSEEETTEEG-----G------
T ss_pred             EEEeCcCCCCC---------hhHHHHHHHHHHHHHHHHHHh-----CCCEEEEeCChhhccCCCCCcc-----c------
Confidence            99999875221         126888999999998887553     4579999999877654322100     0      


Q ss_pred             HHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC--------
Q 022103          191 EQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ--------  262 (302)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~--------  262 (302)
                                           ...+.+...|+.+|.+.+.+.+.++.+   .|++++.++||.+.++.....        
T Consensus       126 ---------------------~~~~~p~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~v~g~~~~~~~~~~~~~~  181 (227)
T 3dhn_A          126 ---------------------DSGEVPENILPGVKALGEFYLNFLMKE---KEIDWVFFSPAADMRPGVRTGRYRLGKDD  181 (227)
T ss_dssp             ---------------------GTTCSCGGGHHHHHHHHHHHHHTGGGC---CSSEEEEEECCSEEESCCCCCCCEEESSB
T ss_pred             ---------------------cCCcchHHHHHHHHHHHHHHHHHHhhc---cCccEEEEeCCcccCCCccccceeecCCC
Confidence                                 001122467999999999999988864   689999999999987653321        


Q ss_pred             --------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcccCC
Q 022103          263 --------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVKS  300 (302)
Q Consensus       263 --------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~  300 (302)
                              .....+++|..++.++..+.   ..|+.|...++..+.
T Consensus       182 ~~~~~~~~~~i~~~Dva~ai~~~l~~~~---~~g~~~~~~~~~~~~  224 (227)
T 3dhn_A          182 MIVDIVGNSHISVEDYAAAMIDELEHPK---HHQERFTIGYLEHHH  224 (227)
T ss_dssp             CCCCTTSCCEEEHHHHHHHHHHHHHSCC---CCSEEEEEECCSCCC
T ss_pred             cccCCCCCcEEeHHHHHHHHHHHHhCcc---ccCcEEEEEeehhcc
Confidence                    12568999999999997433   467888777776653

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=99.86  E-value=4.7e-21  Score=177.83  Aligned_cols=228  Identities=15%  Similarity=0.083  Sum_probs=160.5

Q ss_pred             EEEEeCCCchHHHHHHHHHHHc-CCEEEEEecChh--hHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCc
Q 022103           32 IAIVTGANKGIGFALVKRLAEL-GLTVILTARDVE--RGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAAL  108 (302)
Q Consensus        32 ~vlItGas~gIG~ala~~l~~~-G~~V~l~~r~~~--~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~i  108 (302)
                      ++|||||+|+||++++++|+++ |++|++++|+..  ..+.. +.+.. +.++.++.+|++|.+++.+++++.     .+
T Consensus         2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~-~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~-----~~   74 (361)
T 1kew_A            2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESL-SDISE-SNRYNFEHADICDSAEITRIFEQY-----QP   74 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGG-TTTTT-CTTEEEEECCTTCHHHHHHHHHHH-----CC
T ss_pred             EEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhh-hhhhc-CCCeEEEECCCCCHHHHHHHHhhc-----CC
Confidence            4999999999999999999998 799999998641  22211 12211 347889999999999999988763     79


Q ss_pred             cEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCC----CCCcEEEecCCCcccccccCcccccccc
Q 022103          109 DILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSP----SKSRILNISSRLGTLSKVRNPNIKSILE  184 (302)
Q Consensus       109 d~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~----~~~~iv~vsS~~~~~~~~~~~~~~~~~~  184 (302)
                      |+|||+||....   +.+.++++..+++|+.++.++++++.+.|..-+    ..++||++||............   ..+
T Consensus        75 d~vih~A~~~~~---~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~---~~~  148 (361)
T 1kew_A           75 DAVMHLAAESHV---DRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDE---VEN  148 (361)
T ss_dssp             SEEEECCSCCCH---HHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGG---SCT
T ss_pred             CEEEECCCCcCh---hhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCccccc---ccc
Confidence            999999997532   234567788999999999999999999875320    1259999999754321110000   000


Q ss_pred             hhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC--
Q 022103          185 DEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ--  262 (302)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~--  262 (302)
                      ++                  ......+...+.+...|+.+|++.+.+++.++.++   |+++++|+||.+.++.....  
T Consensus       149 ~~------------------~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~~vrp~~v~G~~~~~~~~  207 (361)
T 1kew_A          149 SV------------------TLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY---GLPTIVTNCSNNYGPYHFPEKL  207 (361)
T ss_dssp             TS------------------CCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTTCCTTSH
T ss_pred             cc------------------cCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCcEEEEeeceeECCCCCcccH
Confidence            00                  00000111112345789999999999999999884   79999999999999875321  


Q ss_pred             -----------------C-------CCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          263 -----------------G-------SHTADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       263 -----------------~-------~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                                       +       ...++++|..++.++..+    ..|..|...++.
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~----~~g~~~~v~~~~  262 (361)
T 1kew_A          208 IPLVILNALEGKPLPIYGKGDQIRDWLYVEDHARALHMVVTEG----KAGETYNIGGHN  262 (361)
T ss_dssp             HHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHC----CTTCEEEECCCC
T ss_pred             HHHHHHHHHcCCCceEcCCCceeEeeEEHHHHHHHHHHHHhCC----CCCCEEEecCCC
Confidence                             0       145899999999988632    357777766653

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=99.86  E-value=9.5e-22  Score=181.14  Aligned_cols=217  Identities=14%  Similarity=0.090  Sum_probs=152.7

Q ss_pred             cccccccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHH
Q 022103           21 VSSTKWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSW  100 (302)
Q Consensus        21 ~~~~~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~  100 (302)
                      .+..+..++++++|||||+|+||++++++|+++|++|++++|+.....+..+.+    .++.++.+|++|.+++.+++++
T Consensus        11 ~~~~~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l----~~v~~~~~Dl~d~~~~~~~~~~   86 (330)
T 2pzm_A           11 SSGLVPRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPV----AGLSVIEGSVTDAGLLERAFDS   86 (330)
T ss_dssp             ---CCSTTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSC----TTEEEEECCTTCHHHHHHHHHH
T ss_pred             ccCCcccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhcc----CCceEEEeeCCCHHHHHHHHhh
Confidence            445567788999999999999999999999999999999999754322111111    3678899999999999999887


Q ss_pred             HHhhCCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccc
Q 022103          101 FKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIK  180 (302)
Q Consensus       101 ~~~~~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~  180 (302)
                      +     .+|+||||||.....    +.++++  +++|+.++.++++++...     +.++||++||............  
T Consensus        87 ~-----~~D~vih~A~~~~~~----~~~~~~--~~~N~~~~~~l~~a~~~~-----~~~~iV~~SS~~~~~~~~~~~~--  148 (330)
T 2pzm_A           87 F-----KPTHVVHSAAAYKDP----DDWAED--AATNVQGSINVAKAASKA-----GVKRLLNFQTALCYGRPATVPI--  148 (330)
T ss_dssp             H-----CCSEEEECCCCCSCT----TCHHHH--HHHHTHHHHHHHHHHHHH-----TCSEEEEEEEGGGGCSCSSSSB--
T ss_pred             c-----CCCEEEECCccCCCc----cccChh--HHHHHHHHHHHHHHHHHc-----CCCEEEEecCHHHhCCCccCCC--
Confidence            6     699999999976432    445666  999999999999999742     3689999999876422111000  


Q ss_pred             cccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcE-EEEeecCcccCCCC
Q 022103          181 SILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGIS-VNSYCPGFTQTSMT  259 (302)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~-V~~v~PG~v~T~~~  259 (302)
                                                 + .+... .+...|+.+|++++.+++.+  ++....|| ++.+.||. .+++.
T Consensus       149 ---------------------------~-~~E~~-~~~~~Y~~sK~~~e~~~~~~--~~~~~~iR~~~v~gp~~-~~~~~  196 (330)
T 2pzm_A          149 ---------------------------P-IDSPT-APFTSYGISKTAGEAFLMMS--DVPVVSLRLANVTGPRL-AIGPI  196 (330)
T ss_dssp             ---------------------------C-TTCCC-CCCSHHHHHHHHHHHHHHTC--SSCEEEEEECEEECTTC-CSSHH
T ss_pred             ---------------------------C-cCCCC-CCCChHHHHHHHHHHHHHHc--CCCEEEEeeeeeECcCC-CCCHH
Confidence                                       0 00000 12468999999999999987  44444677 67777774 23221


Q ss_pred             -----------C------CCCCCCHHHHHH-HHHHHhhcCCCCCCCcceeecCCc
Q 022103          260 -----------Q------GQGSHTADEAAD-VGARLLLLHPQQLPTAKFYIGLDP  296 (302)
Q Consensus       260 -----------~------~~~~~~~~~~a~-~~~~l~~~~~~~~~~G~~~~~~~~  296 (302)
                                 .      ......++++|. .++.++.. + .   |..|...++
T Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~a~~~~~~~-~-~---g~~~~v~~~  246 (330)
T 2pzm_A          197 PTFYKRLKAGQKCFCSDTVRDFLDMSDFLAIADLSLQEG-R-P---TGVFNVSTG  246 (330)
T ss_dssp             HHHHHHHHTTCCCCEESCEECEEEHHHHHHHHHHHTSTT-C-C---CEEEEESCS
T ss_pred             HHHHHHHHcCCEEeCCCCEecceeHHHHHHHHHHHHhhc-C-C---CCEEEeCCC
Confidence                       0      012367899999 99988863 2 2   666666554

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=99.86  E-value=1.5e-20  Score=173.75  Aligned_cols=174  Identities=14%  Similarity=0.002  Sum_probs=130.5

Q ss_pred             cccccccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHH
Q 022103           21 VSSTKWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSW  100 (302)
Q Consensus        21 ~~~~~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~  100 (302)
                      ....+...++++||||||+|+||.++++.|+++|++|++++|+...            ..+.++.+|++|.+++.++++ 
T Consensus        10 ~~~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~------------~~~~~~~~Dl~d~~~~~~~~~-   76 (347)
T 4id9_A           10 HSSGLVPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG------------TGGEEVVGSLEDGQALSDAIM-   76 (347)
T ss_dssp             -----------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS------------SCCSEEESCTTCHHHHHHHHT-
T ss_pred             CCCcccccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC------------CCccEEecCcCCHHHHHHHHh-
Confidence            3344556888999999999999999999999999999999998754            367899999999999888776 


Q ss_pred             HHhhCCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccc
Q 022103          101 FKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIK  180 (302)
Q Consensus       101 ~~~~~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~  180 (302)
                            .+|+|||+|+...     .+.+.++..+++|+.++.++++++...     +.++||++||...+......    
T Consensus        77 ------~~d~vih~A~~~~-----~~~~~~~~~~~~nv~~~~~ll~a~~~~-----~~~~~V~~SS~~vyg~~~~~----  136 (347)
T 4id9_A           77 ------GVSAVLHLGAFMS-----WAPADRDRMFAVNVEGTRRLLDAASAA-----GVRRFVFASSGEVYPENRPE----  136 (347)
T ss_dssp             ------TCSEEEECCCCCC-----SSGGGHHHHHHHHTHHHHHHHHHHHHT-----TCSEEEEEEEGGGTTTTSCS----
T ss_pred             ------CCCEEEECCcccC-----cchhhHHHHHHHHHHHHHHHHHHHHHc-----CCCeEEEECCHHHhCCCCCC----
Confidence                  6899999999753     344556899999999999999998652     46799999997654321000    


Q ss_pred             cccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCccc
Q 022103          181 SILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQ  255 (302)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~  255 (302)
                                               ..+..+...+.+...|+.+|.+.|.+++.++.+   .|++++.|.|+.+.
T Consensus       137 -------------------------~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~  183 (347)
T 4id9_A          137 -------------------------FLPVTEDHPLCPNSPYGLTKLLGEELVRFHQRS---GAMETVILRFSHTQ  183 (347)
T ss_dssp             -------------------------SSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHH---SSSEEEEEEECEEE
T ss_pred             -------------------------CCCcCCCCCCCCCChHHHHHHHHHHHHHHHHHh---cCCceEEEccceEe
Confidence                                     001111122334578999999999999999988   58999999999887

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.86  E-value=1.7e-20  Score=172.87  Aligned_cols=226  Identities=19%  Similarity=0.163  Sum_probs=153.2

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHH--HhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVES--LSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~--l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      ++++++|||||+|+||++++++|+++|++|+++.|+.+..+.....  +...+.++.++.+|++|.+++.++++      
T Consensus         3 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------   76 (337)
T 2c29_D            3 SQSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIK------   76 (337)
T ss_dssp             ---CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHHT------
T ss_pred             CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHHc------
Confidence            4678999999999999999999999999999999987644332221  11101257889999999998887765      


Q ss_pred             CCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccch
Q 022103          106 AALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILED  185 (302)
Q Consensus       106 g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~  185 (302)
                       .+|+|||+|+...  ....  +..++.+++|+.++.++++++.+..    ..++||++||..+..+.....   ...++
T Consensus        77 -~~d~Vih~A~~~~--~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~----~~~riV~~SS~~~~~~~~~~~---~~~~E  144 (337)
T 2c29_D           77 -GCTGVFHVATPMD--FESK--DPENEVIKPTIEGMLGIMKSCAAAK----TVRRLVFTSSAGTVNIQEHQL---PVYDE  144 (337)
T ss_dssp             -TCSEEEECCCCCC--SSCS--SHHHHTHHHHHHHHHHHHHHHHHHS----CCCEEEEECCGGGTSCSSSCC---SEECT
T ss_pred             -CCCEEEEeccccC--CCCC--ChHHHHHHHHHHHHHHHHHHHHhCC----CccEEEEeeeHhhcccCCCCC---cccCc
Confidence             5799999998642  1111  2235689999999999999987642    257999999987654432110   01122


Q ss_pred             hhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC---
Q 022103          186 EELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ---  262 (302)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~---  262 (302)
                      +.+.+.....       ..          .+....|+.||.+.|.+++.++.+   +|+++++|+|+.+.++.....   
T Consensus       145 ~~~~~~~~~~-------~~----------~~~~~~Y~~sK~~~E~~~~~~~~~---~gi~~~~lrp~~v~Gp~~~~~~~~  204 (337)
T 2c29_D          145 SCWSDMEFCR-------AK----------KMTAWMYFVSKTLAEQAAWKYAKE---NNIDFITIIPTLVVGPFIMSSMPP  204 (337)
T ss_dssp             TCCCCHHHHH-------HH----------CCTTHHHHHHHHHHHHHHHHHHHH---HTCCEEEEEECEEESCCSCSSCCH
T ss_pred             ccCCchhhhc-------cc----------CCccchHHHHHHHHHHHHHHHHHH---cCCcEEEEeCCceECCCCCCCCCc
Confidence            2111110000       00          001246999999999999888865   589999999999999874321   


Q ss_pred             ----------C------------CCCHHHHHHHHHHHhhcCCCCCCCcceeecC
Q 022103          263 ----------G------------SHTADEAADVGARLLLLHPQQLPTAKFYIGL  294 (302)
Q Consensus       263 ----------~------------~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~  294 (302)
                                +            ...++++|..++.++.. +  ...|.++..+
T Consensus       205 ~~~~~~~~~~g~~~~~~~~~~~~~i~v~Dva~a~~~~~~~-~--~~~~~~~~~~  255 (337)
T 2c29_D          205 SLITALSPITGNEAHYSIIRQGQFVHLDDLCNAHIYLFEN-P--KAEGRYICSS  255 (337)
T ss_dssp             HHHHHTHHHHTCGGGHHHHTEEEEEEHHHHHHHHHHHHHC-T--TCCEEEEECC
T ss_pred             hHHHHHHHHcCCCccccccCCCCEEEHHHHHHHHHHHhcC-c--ccCceEEEeC
Confidence                      0            35678999999888763 2  2356654443

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.86  E-value=3.1e-21  Score=167.52  Aligned_cols=189  Identities=19%  Similarity=0.264  Sum_probs=145.9

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCC-HHHHHHHHHHHHhhCCCccE
Q 022103           32 IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSD-PSSIEAFVSWFKSNFAALDI  110 (302)
Q Consensus        32 ~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~-~~~~~~~~~~~~~~~g~id~  110 (302)
                      +++||||+|+||+++++.|+++|++|++++|+.++.+..        ..+.++.+|++| .+++.++++       .+|+
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~--------~~~~~~~~D~~d~~~~~~~~~~-------~~d~   66 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY--------NNVKAVHFDVDWTPEEMAKQLH-------GMDA   66 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC--------TTEEEEECCTTSCHHHHHTTTT-------TCSE
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc--------CCceEEEecccCCHHHHHHHHc-------CCCE
Confidence            599999999999999999999999999999998654321        478999999999 888876665       6999


Q ss_pred             EEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhhcH
Q 022103          111 LVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSE  190 (302)
Q Consensus       111 lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~  190 (302)
                      ||||||....           +.+++|+.++.++++++..    . +.++||++||..+..+.+..       + ..   
T Consensus        67 vi~~ag~~~~-----------~~~~~n~~~~~~l~~a~~~----~-~~~~iv~~SS~~~~~~~~~~-------e-~~---  119 (219)
T 3dqp_A           67 IINVSGSGGK-----------SLLKVDLYGAVKLMQAAEK----A-EVKRFILLSTIFSLQPEKWI-------G-AG---  119 (219)
T ss_dssp             EEECCCCTTS-----------SCCCCCCHHHHHHHHHHHH----T-TCCEEEEECCTTTTCGGGCC-------S-HH---
T ss_pred             EEECCcCCCC-----------CcEeEeHHHHHHHHHHHHH----h-CCCEEEEECcccccCCCccc-------c-cc---
Confidence            9999998642           2688899999999988843    2 46799999998765432110       0 00   


Q ss_pred             HHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCC--------C
Q 022103          191 EQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG--------Q  262 (302)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~--------~  262 (302)
                                              +.....|+.+|.+.+.+++      ...|++++.|+||.+.++....        .
T Consensus       120 ------------------------~~~~~~Y~~sK~~~e~~~~------~~~~i~~~ilrp~~v~g~~~~~~~~~~~~~~  169 (219)
T 3dqp_A          120 ------------------------FDALKDYYIAKHFADLYLT------KETNLDYTIIQPGALTEEEATGLIDINDEVS  169 (219)
T ss_dssp             ------------------------HHHTHHHHHHHHHHHHHHH------HSCCCEEEEEEECSEECSCCCSEEEESSSCC
T ss_pred             ------------------------cccccHHHHHHHHHHHHHH------hccCCcEEEEeCceEecCCCCCccccCCCcC
Confidence                                    1123679999999999887      2479999999999999876443        2


Q ss_pred             CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCC
Q 022103          263 GSHTADEAADVGARLLLLHPQQLPTAKFYIGLD  295 (302)
Q Consensus       263 ~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~  295 (302)
                      ....++++|..++.++.. +.  ..|..|...+
T Consensus       170 ~~i~~~Dva~~i~~~l~~-~~--~~g~~~~i~~  199 (219)
T 3dqp_A          170 ASNTIGDVADTIKELVMT-DH--SIGKVISMHN  199 (219)
T ss_dssp             CCEEHHHHHHHHHHHHTC-GG--GTTEEEEEEE
T ss_pred             CcccHHHHHHHHHHHHhC-cc--ccCcEEEeCC
Confidence            347799999999999873 22  3466666643

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=99.86  E-value=3.1e-20  Score=174.86  Aligned_cols=203  Identities=14%  Similarity=0.092  Sum_probs=139.5

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHH-----------------HHHHHHhhCCCceeEEEeeC
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQ-----------------RAVESLSEKGLPVNFFQLDV   88 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~-----------------~~~~~l~~~~~~~~~~~~Dl   88 (302)
                      ..-++.+||||||+|.||++++++|+++|++|++++|......                 ...+.....+.++.++.+|+
T Consensus         7 ~~~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl   86 (404)
T 1i24_A            7 HHHHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDI   86 (404)
T ss_dssp             -----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCT
T ss_pred             cccCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCC
Confidence            4456789999999999999999999999999999999764321                 11111111234788999999


Q ss_pred             CCHHHHHHHHHHHHhhCCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCC
Q 022103           89 SDPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRL  168 (302)
Q Consensus        89 t~~~~~~~~~~~~~~~~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~  168 (302)
                      +|.+++.++++..     ++|+|||+||.........+++.++..+++|+.++.++++++.+.   . ..++||++||..
T Consensus        87 ~d~~~~~~~~~~~-----~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~---~-~~~~~V~~SS~~  157 (404)
T 1i24_A           87 CDFEFLAESFKSF-----EPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEF---G-EECHLVKLGTMG  157 (404)
T ss_dssp             TSHHHHHHHHHHH-----CCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHH---C-TTCEEEEECCGG
T ss_pred             CCHHHHHHHHhcc-----CCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHh---C-CCcEEEEeCcHH
Confidence            9999999988865     699999999976432222366777889999999999999998764   1 125999999975


Q ss_pred             cccccccCcccccccchhhhcHHHHHHHHHHHHhhhccCCCCCC-CCCcccccchhhHHHHHHHHHHHHHHccCCCcEEE
Q 022103          169 GTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQ-GWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVN  247 (302)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~  247 (302)
                      .+.. ...+     .+++.+.+.             ..+.-... ..+.+...|+.||++.+.+++.++.++   |++++
T Consensus       158 vyg~-~~~~-----~~E~~~~~~-------------~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~  215 (404)
T 1i24_A          158 EYGT-PNID-----IEEGYITIT-------------HNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRAT  215 (404)
T ss_dssp             GGCC-CSSC-----BCSSEEEEE-------------ETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEE
T ss_pred             HhCC-CCCC-----CCccccccc-------------cccccccccCCCCCCChhHHHHHHHHHHHHHHHHhc---CCeEE
Confidence            5422 1110     000000000             00000000 012234789999999999999999874   89999


Q ss_pred             EeecCcccCCCC
Q 022103          248 SYCPGFTQTSMT  259 (302)
Q Consensus       248 ~v~PG~v~T~~~  259 (302)
                      +|+||.|.++..
T Consensus       216 ivrp~~v~Gp~~  227 (404)
T 1i24_A          216 DLNQGVVYGVKT  227 (404)
T ss_dssp             EEEECEEECSCC
T ss_pred             EEecceeeCCCC
Confidence            999999988753

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=99.85  E-value=1.8e-20  Score=175.14  Aligned_cols=191  Identities=15%  Similarity=0.007  Sum_probs=154.8

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHH-HcCCEEEEEecChh------------hHHHHHHHHhhCCCceeEEEeeCCCHHH
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLA-ELGLTVILTARDVE------------RGQRAVESLSEKGLPVNFFQLDVSDPSS   93 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~-~~G~~V~l~~r~~~------------~~~~~~~~l~~~~~~~~~~~~Dlt~~~~   93 (302)
                      ...+|+||||||++|||++++.+|+ +.|+.++++.+..+            ..+...+++.+.|.+...+.||+++.++
T Consensus        47 ~~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~  126 (401)
T 4ggo_A           47 AKAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEI  126 (401)
T ss_dssp             SCCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHH
T ss_pred             cCCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHH
Confidence            4568999999999999999999999 67999999988643            2345667778888999999999999999


Q ss_pred             HHHHHHHHHhhCCCccEEEEcCCCCCC-C----------------------------------CCCCCHH---HHHHHHH
Q 022103           94 IEAFVSWFKSNFAALDILVNNAGVSFN-D----------------------------------IYKNTVE---HAETVIR  135 (302)
Q Consensus        94 ~~~~~~~~~~~~g~id~lv~~aG~~~~-~----------------------------------~~~~~~e---~~~~~~~  135 (302)
                      ++++++++.+++|+||+|||+++...+ .                                  +...+.+   .+..+|.
T Consensus       127 i~~vi~~i~~~~G~IDiLVhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~ldt~~~~i~~~~l~pat~eeie~T~~vMg  206 (401)
T 4ggo_A          127 KAQVIEEAKKKGIKFDLIVYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTVDPFTGELKEISAEPANDEEAAATVKVMG  206 (401)
T ss_dssp             HHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEECTTTCCEEEEEECCCCHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHhcCCCCEEEEecccccccCCCCCceeeeeecccccccccccccccccccccccccCCcHHHHHHHHHHHh
Confidence            999999999999999999999986521 0                                  0112334   4456677


Q ss_pred             hhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCC
Q 022103          136 TNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWP  215 (302)
Q Consensus       136 vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (302)
                      ...++.+...+...+.|.+   .+++|.+|++......                                         |
T Consensus       207 ~s~~s~w~~al~~a~lla~---G~siva~SYiGse~t~-----------------------------------------P  242 (401)
T 4ggo_A          207 GEDWERWIKQLSKEGLLEE---GCITLAYSYIGPEATQ-----------------------------------------A  242 (401)
T ss_dssp             SHHHHHHHHHHHHTTCEEE---EEEEEEEECCCCGGGH-----------------------------------------H
T ss_pred             hhHHHHHHHHHHhhhcccC---CceEEEEeccCcceee-----------------------------------------c
Confidence            7888889999999998875   4999999997764321                                         2


Q ss_pred             cc-cccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCCC
Q 022103          216 EI-WTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQG  263 (302)
Q Consensus       216 ~~-~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~~  263 (302)
                      .+ +..|+++|+++|..++.|+.+++  ++++++++||.+.|.-.....
T Consensus       243 ~Y~~G~mG~AKaaLEa~~r~La~eL~--~~~a~v~v~~a~vT~AssaIP  289 (401)
T 4ggo_A          243 LYRKGTIGKAKEHLEATAHRLNKENP--SIRAFVSVNKGLVTRASAVIP  289 (401)
T ss_dssp             HHTTSHHHHHHHHHHHHHHHHHHHCT--TEEEEEEECCCCCCTTGGGSS
T ss_pred             CCCccHHHHHHHHHHHHHHHHHHhcC--CCcEEEEEcCccccchhhcCC
Confidence            11 14689999999999999999986  489999999999998877653

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=99.85  E-value=6.6e-21  Score=173.41  Aligned_cols=209  Identities=14%  Similarity=0.005  Sum_probs=153.9

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCccE
Q 022103           31 TIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDI  110 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id~  110 (302)
                      ++|+||||+|+||++++++|+++|++|++++|+.+.....      ....+.++.+|++|.+ +.+.++       . |+
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~~~~~~~Dl~d~~-~~~~~~-------~-d~   65 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREF------VNPSAELHVRDLKDYS-WGAGIK-------G-DV   65 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGG------SCTTSEEECCCTTSTT-TTTTCC-------C-SE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhh------cCCCceEEECccccHH-HHhhcC-------C-CE
Confidence            3699999999999999999999999999999986543211      1346789999999987 654433       3 99


Q ss_pred             EEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhhcH
Q 022103          111 LVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSE  190 (302)
Q Consensus       111 lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~  190 (302)
                      |||+||....   ..+.++++..+++|+.++.++++++...     +.++||++||...+......+             
T Consensus        66 vih~A~~~~~---~~~~~~~~~~~~~n~~~~~~l~~a~~~~-----~~~~iv~~SS~~vyg~~~~~~-------------  124 (312)
T 3ko8_A           66 VFHFAANPEV---RLSTTEPIVHFNENVVATFNVLEWARQT-----GVRTVVFASSSTVYGDADVIP-------------  124 (312)
T ss_dssp             EEECCSSCSS---SGGGSCHHHHHHHHHHHHHHHHHHHHHH-----TCCEEEEEEEGGGGCSCSSSS-------------
T ss_pred             EEECCCCCCc---hhhhhCHHHHHHHHHHHHHHHHHHHHHc-----CCCEEEEeCcHHHhCCCCCCC-------------
Confidence            9999996532   3456678889999999999999998553     357999999977653221110             


Q ss_pred             HHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC--------
Q 022103          191 EQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ--------  262 (302)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~--------  262 (302)
                                        ..+...+.+...|+.+|.+.+.+++.++.++   |++++.|+||.+.++.....        
T Consensus       125 ------------------~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---g~~~~~lrp~~v~g~~~~~~~~~~~~~~  183 (312)
T 3ko8_A          125 ------------------TPEEEPYKPISVYGAAKAAGEVMCATYARLF---GVRCLAVRYANVVGPRLRHGVIYDFIMK  183 (312)
T ss_dssp             ------------------BCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECTTCCSSHHHHHHHH
T ss_pred             ------------------CCCCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCCEEEEeeccccCcCCCCChHHHHHHH
Confidence                              0011123335789999999999999999984   89999999999998864321        


Q ss_pred             ------------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCc
Q 022103          263 ------------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDP  296 (302)
Q Consensus       263 ------------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  296 (302)
                                        ..+..+++|..++.++..+......|..|...++
T Consensus       184 ~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~ni~~~  235 (312)
T 3ko8_A          184 LRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAWKKFEEMDAPFLALNVGNV  235 (312)
T ss_dssp             HHHCTTEEEEC----CEECEEEHHHHHHHHHHHHHHHHHSCCSEEEEEESCS
T ss_pred             HHhCCCCeEEcCCCCeEEeeEEHHHHHHHHHHHHHhccccCCCCcEEEEcCC
Confidence                              1144899999999998742222245666655544

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.85  E-value=2.8e-21  Score=216.84  Aligned_cols=177  Identities=17%  Similarity=0.148  Sum_probs=138.2

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCE-EEEEecChhh---HHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHh
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLT-VILTARDVER---GQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKS  103 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~-V~l~~r~~~~---~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~  103 (302)
                      .++|+++||||++|||+++|+.|+++|++ |++++|+..+   .+...+++...+.++.++.+|++|.++++++++++.+
T Consensus      1882 ~~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~ 1961 (2512)
T 2vz8_A         1882 PPHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEATQ 1961 (2512)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHHh
Confidence            47899999999999999999999999997 8888998643   3455666666677889999999999999999999874


Q ss_pred             hCCCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccc
Q 022103          104 NFAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSI  182 (302)
Q Consensus       104 ~~g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~  182 (302)
                       +++||+||||||+... .+.+++.++|++++++|+.|++++.+.+.+.|.+   .++||++||.++..+.+.       
T Consensus      1962 -~g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~---~g~iV~iSS~ag~~g~~g------- 2030 (2512)
T 2vz8_A         1962 -LGPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPE---LDYFVIFSSVSCGRGNAG------- 2030 (2512)
T ss_dssp             -HSCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTT---CCEEEEECCHHHHTTCTT-------
T ss_pred             -cCCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhccc---CCEEEEecchhhcCCCCC-------
Confidence             7999999999998654 5788999999999999999999999999998764   389999999998876543       


Q ss_pred             cchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcc
Q 022103          183 LEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFT  254 (302)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v  254 (302)
                                                         +..|+++|+++++|++.++.+    |+...++..|.+
T Consensus      2031 -----------------------------------~~~Y~aaKaal~~l~~~rr~~----Gl~~~a~~~g~~ 2063 (2512)
T 2vz8_A         2031 -----------------------------------QANYGFANSAMERICEKRRHD----GLPGLAVQWGAI 2063 (2512)
T ss_dssp             -----------------------------------CHHHHHHHHHHHHHHHHHHHT----TSCCCEEEECCB
T ss_pred             -----------------------------------cHHHHHHHHHHHHHHHHHHHC----CCcEEEEEccCc
Confidence                                               377999999999999987764    566666666654

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=99.84  E-value=8.6e-20  Score=171.59  Aligned_cols=188  Identities=16%  Similarity=0.105  Sum_probs=136.6

Q ss_pred             cEEEEeCCCchHHHHHHHHHH-HcCCEEEEEecChhh---------HHHHHHHHhhC-----CCc---eeEEEeeCCCHH
Q 022103           31 TIAIVTGANKGIGFALVKRLA-ELGLTVILTARDVER---------GQRAVESLSEK-----GLP---VNFFQLDVSDPS   92 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~-~~G~~V~l~~r~~~~---------~~~~~~~l~~~-----~~~---~~~~~~Dlt~~~   92 (302)
                      .+||||||+|+||++++++|+ ++|++|++++|+...         .+...+.+.+.     ...   +.++.+|++|.+
T Consensus         3 m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~   82 (397)
T 1gy8_A            3 MRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNED   82 (397)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCHH
Confidence            479999999999999999999 999999999997644         33333223222     123   889999999999


Q ss_pred             HHHHHHHHHHhhCCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccc
Q 022103           93 SIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLS  172 (302)
Q Consensus        93 ~~~~~~~~~~~~~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~  172 (302)
                      ++.+++++    ++.+|+|||+||.....   .+.++++..+++|+.++.++++++..    . +.++||++||.... +
T Consensus        83 ~~~~~~~~----~~~~d~vih~A~~~~~~---~~~~~~~~~~~~Nv~g~~~ll~a~~~----~-~~~~iv~~SS~~v~-g  149 (397)
T 1gy8_A           83 FLNGVFTR----HGPIDAVVHMCAFLAVG---ESVRDPLKYYDNNVVGILRLLQAMLL----H-KCDKIIFSSSAAIF-G  149 (397)
T ss_dssp             HHHHHHHH----SCCCCEEEECCCCCCHH---HHHHCHHHHHHHHHHHHHHHHHHHHH----T-TCCEEEEEEEGGGT-B
T ss_pred             HHHHHHHh----cCCCCEEEECCCccCcC---cchhhHHHHHHHHhHHHHHHHHHHHH----h-CCCEEEEECCHHHh-C
Confidence            98888764    45699999999975422   24567888999999999999998644    2 46799999996543 2


Q ss_pred             cccCcccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecC
Q 022103          173 KVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPG  252 (302)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG  252 (302)
                      .......                       ........+...+.+...|+.+|++.+.+++.++.++   |+++++|+|+
T Consensus       150 ~~~~~~~-----------------------~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ilRp~  203 (397)
T 1gy8_A          150 NPTMGSV-----------------------STNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY---GIKGICLRYF  203 (397)
T ss_dssp             SCCC----------------------------CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEEC
T ss_pred             CCCcccc-----------------------cccccCcCccCCCCCCCchHHHHHHHHHHHHHHHHHH---CCcEEEEecc
Confidence            2110000                       0000011111122335789999999999999999985   8999999999


Q ss_pred             cccCC
Q 022103          253 FTQTS  257 (302)
Q Consensus       253 ~v~T~  257 (302)
                      .+..+
T Consensus       204 ~v~G~  208 (397)
T 1gy8_A          204 NACGA  208 (397)
T ss_dssp             EEECC
T ss_pred             ceeCC
Confidence            98765

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.84  E-value=1.4e-20  Score=168.06  Aligned_cols=189  Identities=20%  Similarity=0.140  Sum_probs=145.2

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCccE
Q 022103           31 TIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDI  110 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id~  110 (302)
                      |+++||||+|+||++++++|+++|++|++++|+..+..         ...+.++.+|++|.+++.++++       .+|+
T Consensus         3 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---------~~~~~~~~~Dl~d~~~~~~~~~-------~~d~   66 (267)
T 3ay3_A            3 NRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA---------EAHEEIVACDLADAQAVHDLVK-------DCDG   66 (267)
T ss_dssp             EEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCC---------CTTEEECCCCTTCHHHHHHHHT-------TCSE
T ss_pred             ceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc---------CCCccEEEccCCCHHHHHHHHc-------CCCE
Confidence            68999999999999999999999999999999875311         1257889999999999888776       5899


Q ss_pred             EEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhhcH
Q 022103          111 LVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSE  190 (302)
Q Consensus       111 lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~  190 (302)
                      |||+||..       +.+.++..+++|+.++.++++++.+.     +.++||++||.......+...             
T Consensus        67 vi~~a~~~-------~~~~~~~~~~~n~~~~~~l~~a~~~~-----~~~~iv~~SS~~~~~~~~~~~-------------  121 (267)
T 3ay3_A           67 IIHLGGVS-------VERPWNDILQANIIGAYNLYEAARNL-----GKPRIVFASSNHTIGYYPRTT-------------  121 (267)
T ss_dssp             EEECCSCC-------SCCCHHHHHHHTHHHHHHHHHHHHHT-----TCCEEEEEEEGGGSTTSBTTS-------------
T ss_pred             EEECCcCC-------CCCCHHHHHHHHHHHHHHHHHHHHHh-----CCCEEEEeCCHHHhCCCCCCC-------------
Confidence            99999975       22456788999999999999998652     468999999987653322110             


Q ss_pred             HHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcc-cCCCCCC--CCCCCH
Q 022103          191 EQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFT-QTSMTQG--QGSHTA  267 (302)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v-~T~~~~~--~~~~~~  267 (302)
                                       ...+...+.+...|+.+|++++.+++.++.+   .|++++.|+||.+ .+++...  .....+
T Consensus       122 -----------------~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrp~~v~~~~~~~~~~~~~~~~  181 (267)
T 3ay3_A          122 -----------------RIDTEVPRRPDSLYGLSKCFGEDLASLYYHK---FDIETLNIRIGSCFPKPKDARMMATWLSV  181 (267)
T ss_dssp             -----------------CBCTTSCCCCCSHHHHHHHHHHHHHHHHHHT---TCCCEEEEEECBCSSSCCSHHHHHHBCCH
T ss_pred             -----------------CCCCCCCCCCCChHHHHHHHHHHHHHHHHHH---cCCCEEEEeceeecCCCCCCCeeeccccH
Confidence                             0001112233478999999999999998764   6899999999998 4543211  124789


Q ss_pred             HHHHHHHHHHhhc
Q 022103          268 DEAADVGARLLLL  280 (302)
Q Consensus       268 ~~~a~~~~~l~~~  280 (302)
                      +++|..++.++..
T Consensus       182 ~dva~~~~~~~~~  194 (267)
T 3ay3_A          182 DDFMRLMKRAFVA  194 (267)
T ss_dssp             HHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHhC
Confidence            9999999999873

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.84  E-value=3.9e-20  Score=157.88  Aligned_cols=191  Identities=12%  Similarity=0.118  Sum_probs=142.8

Q ss_pred             CcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCcc
Q 022103           30 ETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALD  109 (302)
Q Consensus        30 ~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id  109 (302)
                      +++++||||+|+||++++++|+++|++|++++|+.++.+..      ...++.++.+|++|.+++.++++       .+|
T Consensus         3 ~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~------~~~~~~~~~~D~~~~~~~~~~~~-------~~d   69 (206)
T 1hdo_A            3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE------GPRPAHVVVGDVLQAADVDKTVA-------GQD   69 (206)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS------SCCCSEEEESCTTSHHHHHHHHT-------TCS
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccc------cCCceEEEEecCCCHHHHHHHHc-------CCC
Confidence            47899999999999999999999999999999998654211      13468899999999999887775       579


Q ss_pred             EEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhhc
Q 022103          110 ILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELS  189 (302)
Q Consensus       110 ~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~  189 (302)
                      +|||++|.....    ++      .++|+.++.++++++...     +.++||++||..........             
T Consensus        70 ~vi~~a~~~~~~----~~------~~~n~~~~~~~~~~~~~~-----~~~~~v~~Ss~~~~~~~~~~-------------  121 (206)
T 1hdo_A           70 AVIVLLGTRNDL----SP------TTVMSEGARNIVAAMKAH-----GVDKVVACTSAFLLWDPTKV-------------  121 (206)
T ss_dssp             EEEECCCCTTCC----SC------CCHHHHHHHHHHHHHHHH-----TCCEEEEECCGGGTSCTTCS-------------
T ss_pred             EEEECccCCCCC----Cc------cchHHHHHHHHHHHHHHh-----CCCeEEEEeeeeeccCcccc-------------
Confidence            999999975431    11      247888888888887653     35799999998654221110             


Q ss_pred             HHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcc-cCCCCCC-------
Q 022103          190 EEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFT-QTSMTQG-------  261 (302)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v-~T~~~~~-------  261 (302)
                                               |.....|+.+|.+++.+++    +   .|++++.|+||.+ .+++...       
T Consensus       122 -------------------------~~~~~~y~~~K~~~e~~~~----~---~~i~~~~lrp~~~~~~~~~~~~~~~~~~  169 (206)
T 1hdo_A          122 -------------------------PPRLQAVTDDHIRMHKVLR----E---SGLKYVAVMPPHIGDQPLTGAYTVTLDG  169 (206)
T ss_dssp             -------------------------CGGGHHHHHHHHHHHHHHH----H---TCSEEEEECCSEEECCCCCSCCEEESSS
T ss_pred             -------------------------cccchhHHHHHHHHHHHHH----h---CCCCEEEEeCCcccCCCCCcceEecccC
Confidence                                     1134679999999999874    2   6899999999998 4443221       


Q ss_pred             ---CCCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCc
Q 022103          262 ---QGSHTADEAADVGARLLLLHPQQLPTAKFYIGLDP  296 (302)
Q Consensus       262 ---~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  296 (302)
                         ....+++++|..++.++.. + . ..|+.|...++
T Consensus       170 ~~~~~~i~~~Dva~~~~~~~~~-~-~-~~g~~~~i~~g  204 (206)
T 1hdo_A          170 RGPSRVISKHDLGHFMLRCLTT-D-E-YDGHSTYPSHQ  204 (206)
T ss_dssp             CSSCSEEEHHHHHHHHHHTTSC-S-T-TTTCEEEEECC
T ss_pred             CCCCCccCHHHHHHHHHHHhcC-c-c-ccccceeeecc
Confidence               1235689999999999873 2 2 57888777665

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=99.84  E-value=1.4e-20  Score=175.43  Aligned_cols=213  Identities=14%  Similarity=0.065  Sum_probs=148.3

Q ss_pred             cccccCcEEEEeCCCchHHHHHHHHHHH--cCCEEEEEecChhhHHHHH-------HHHhhCCCceeEEEeeCCCHHHHH
Q 022103           25 KWWSKETIAIVTGANKGIGFALVKRLAE--LGLTVILTARDVERGQRAV-------ESLSEKGLPVNFFQLDVSDPSSIE   95 (302)
Q Consensus        25 ~~~~~~k~vlItGas~gIG~ala~~l~~--~G~~V~l~~r~~~~~~~~~-------~~l~~~~~~~~~~~~Dlt~~~~~~   95 (302)
                      .+++++++||||||+|+||++++++|++  .|++|++++|+........       ......+..+.++.+|++|.++++
T Consensus         5 ~~~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~   84 (362)
T 3sxp_A            5 DDELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLR   84 (362)
T ss_dssp             SCCCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHH
T ss_pred             chhcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHH
Confidence            3567899999999999999999999999  8999999999764211100       011112346789999999999888


Q ss_pred             HHHHHHHhhCCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCccccccc
Q 022103           96 AFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVR  175 (302)
Q Consensus        96 ~~~~~~~~~~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~  175 (302)
                      ++      ....+|+|||+||...     .+.++++..+++|+.++.++++++...      ..+||++||...+ +...
T Consensus        85 ~~------~~~~~D~vih~A~~~~-----~~~~~~~~~~~~Nv~gt~~ll~aa~~~------~~~~V~~SS~~vy-g~~~  146 (362)
T 3sxp_A           85 RL------EKLHFDYLFHQAAVSD-----TTMLNQELVMKTNYQAFLNLLEIARSK------KAKVIYASSAGVY-GNTK  146 (362)
T ss_dssp             HH------TTSCCSEEEECCCCCG-----GGCCCHHHHHHHHTHHHHHHHHHHHHT------TCEEEEEEEGGGG-CSCC
T ss_pred             Hh------hccCCCEEEECCccCC-----ccccCHHHHHHHHHHHHHHHHHHHHHc------CCcEEEeCcHHHh-CCCC
Confidence            76      2358999999999643     245678889999999999999998442      3459999995543 2221


Q ss_pred             CcccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCccc
Q 022103          176 NPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQ  255 (302)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~  255 (302)
                      .+                               ..+...+.+...|+.+|.+.+.+++.++.+     +++..|.|+.+.
T Consensus       147 ~~-------------------------------~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~-----~~~~~lR~~~v~  190 (362)
T 3sxp_A          147 AP-------------------------------NVVGKNESPENVYGFSKLCMDEFVLSHSND-----NVQVGLRYFNVY  190 (362)
T ss_dssp             SS-------------------------------BCTTSCCCCSSHHHHHHHHHHHHHHHTTTT-----SCEEEEEECSEE
T ss_pred             CC-------------------------------CCCCCCCCCCChhHHHHHHHHHHHHHHhcc-----CCEEEEEeCcee
Confidence            11                               001111233478999999999999998876     556666666665


Q ss_pred             CCCCCCC------------------------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCc
Q 022103          256 TSMTQGQ------------------------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDP  296 (302)
Q Consensus       256 T~~~~~~------------------------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  296 (302)
                      .+.....                              ..+.++++|..++.++.. +   ..| .|...++
T Consensus       191 Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~ai~~~~~~-~---~~g-~~~i~~~  256 (362)
T 3sxp_A          191 GPREFYKEKTASMVLQLALGAMAFKEVKLFEFGEQLRDFVYIEDVIQANVKAMKA-Q---KSG-VYNVGYS  256 (362)
T ss_dssp             STTCGGGGGGSCHHHHHHHHHHTTSEEECSGGGCCEEECEEHHHHHHHHHHHTTC-S---SCE-EEEESCS
T ss_pred             CcCCCCCCcchhHHHHHHHHHHhCCCeEEECCCCeEEccEEHHHHHHHHHHHHhc-C---CCC-EEEeCCC
Confidence            4432110                              124589999999999863 3   257 5555443

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.84  E-value=1.2e-20  Score=172.25  Aligned_cols=223  Identities=23%  Similarity=0.245  Sum_probs=147.0

Q ss_pred             CcEEEEeCCCchHHHHHHHHHHHcCCEEEEEec-ChhhHHHH--HHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           30 ETIAIVTGANKGIGFALVKRLAELGLTVILTAR-DVERGQRA--VESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        30 ~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r-~~~~~~~~--~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      ||++|||||+|+||++++++|+++|++|+++.| +.+..+..  ...+...+.++.++.+|++|.++++++++       
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   73 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLSNPDSFAAAIE-------   73 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHHHTSTTHHHHEEECCCCTTCGGGGHHHHT-------
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHHHhhhccCCceEEEecCCCCHHHHHHHHc-------
Confidence            588999999999999999999999999999998 65321111  11111101257788899999999888776       


Q ss_pred             CccEEEEcCCCCCCCCCCCCHHH-HHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccch
Q 022103          107 ALDILVNNAGVSFNDIYKNTVEH-AETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILED  185 (302)
Q Consensus       107 ~id~lv~~aG~~~~~~~~~~~e~-~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~  185 (302)
                      .+|+|||+|+..  .   .+.++ +++.+++|+.+++++++++.+..    +.++||++||..+..+.....   ...++
T Consensus        74 ~~d~vih~A~~~--~---~~~~~~~~~~~~~nv~gt~~l~~aa~~~~----~~~~iV~~SS~~~~~~~~~~~---~~~~e  141 (322)
T 2p4h_X           74 GCVGIFHTASPI--D---FAVSEPEEIVTKRTVDGALGILKACVNSK----TVKRFIYTSSGSAVSFNGKDK---DVLDE  141 (322)
T ss_dssp             TCSEEEECCCCC-------------CHHHHHHHHHHHHHHHHHTTCS----SCCEEEEEEEGGGTSCSSSCC---SEECT
T ss_pred             CCCEEEEcCCcc--c---CCCCChHHHHHHHHHHHHHHHHHHHHhcC----CccEEEEeccHHHcccCCCCC---eecCC
Confidence            579999999753  1   12222 35689999999999999987641    357999999987654332110   01111


Q ss_pred             hhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC---
Q 022103          186 EELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ---  262 (302)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~---  262 (302)
                      +.+.......       .         ..|. ...|+.||.+.+.+++.++.+   +|+++++|+||.+.+++....   
T Consensus       142 ~~~~~~~~~~-------~---------~~p~-~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrp~~v~g~~~~~~~~~  201 (322)
T 2p4h_X          142 SDWSDVDLLR-------S---------VKPF-GWNYAVSKTLAEKAVLEFGEQ---NGIDVVTLILPFIVGRFVCPKLPD  201 (322)
T ss_dssp             TCCCCHHHHH-------H---------HCCT-THHHHHHHHHHHHHHHHHHHH---TTCCEEEEEECEEESCCCSSSCCH
T ss_pred             ccccchhhhc-------c---------cCcc-cccHHHHHHHHHHHHHHHHHh---cCCcEEEEcCCceECCCCCCCCCc
Confidence            1111000000       0         0011 125999999999988887765   689999999999999874321   


Q ss_pred             ---------------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCC
Q 022103          263 ---------------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLD  295 (302)
Q Consensus       263 ---------------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~  295 (302)
                                           ....++++|..++.++.. +.  .+|.+. ..+
T Consensus       202 ~~~~~~~~~~g~~~~~~~~~~~~i~v~Dva~a~~~~~~~-~~--~~g~~~-~~~  251 (322)
T 2p4h_X          202 SIEKALVLVLGKKEQIGVTRFHMVHVDDVARAHIYLLEN-SV--PGGRYN-CSP  251 (322)
T ss_dssp             HHHHHTHHHHSCGGGCCEEEEEEEEHHHHHHHHHHHHHS-CC--CCEEEE-CCC
T ss_pred             hHHHHHHHHhCCCccCcCCCcCEEEHHHHHHHHHHHhhC-cC--CCCCEE-EcC
Confidence                                 135679999999998863 22  567744 444

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=99.84  E-value=3e-20  Score=171.53  Aligned_cols=221  Identities=15%  Similarity=0.106  Sum_probs=155.6

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHc--CCEEEEEecChhh-HHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           31 TIAIVTGANKGIGFALVKRLAEL--GLTVILTARDVER-GQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~--G~~V~l~~r~~~~-~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      ++++||||+|+||++++++|+++  |++|++++|+... .....+.+.  +.++.++.+|++|.+++.++++       .
T Consensus         5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~-------~   75 (348)
T 1oc2_A            5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAIL--GDRVELVVGDIADAELVDKLAA-------K   75 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGC--SSSEEEEECCTTCHHHHHHHHT-------T
T ss_pred             cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhhc--cCCeEEEECCCCCHHHHHHHhh-------c
Confidence            68999999999999999999999  8999999996521 111111121  2468899999999998888776       4


Q ss_pred             ccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCccccccc-Ccccccccchh
Q 022103          108 LDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVR-NPNIKSILEDE  186 (302)
Q Consensus       108 id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~-~~~~~~~~~~~  186 (302)
                      +|+|||+||....   ..+.++++..+++|+.++.++++++.+.     + .+||++||...+..... .+..  ..   
T Consensus        76 ~d~vih~A~~~~~---~~~~~~~~~~~~~Nv~g~~~l~~a~~~~-----~-~~~v~~SS~~vyg~~~~~~~~~--~~---  141 (348)
T 1oc2_A           76 ADAIVHYAAESHN---DNSLNDPSPFIHTNFIGTYTLLEAARKY-----D-IRFHHVSTDEVYGDLPLREDLP--GH---  141 (348)
T ss_dssp             CSEEEECCSCCCH---HHHHHCCHHHHHHHTHHHHHHHHHHHHH-----T-CEEEEEEEGGGGCCBCCGGGST--TT---
T ss_pred             CCEEEECCcccCc---cchhhCHHHHHHHHHHHHHHHHHHHHHh-----C-CeEEEecccceeCCCccccccc--cc---
Confidence            6999999997532   1244567789999999999999999875     2 49999999765422110 0000  00   


Q ss_pred             hhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC----
Q 022103          187 ELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ----  262 (302)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~----  262 (302)
                                     .......+.+...+.+...|+.+|++.+.+++.++.++   |+++++|+||.+.++.....    
T Consensus       142 ---------------~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ilrp~~v~G~~~~~~~~~~  203 (348)
T 1oc2_A          142 ---------------GEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF---GVKATISNCSNNYGPYQHIEKFIP  203 (348)
T ss_dssp             ---------------TCSTTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEESTTCCTTSHHH
T ss_pred             ---------------ccccCCCcCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCCEEEEeeceeeCCCCCccchHH
Confidence                           00000111111123345789999999999999999874   89999999999988775311    


Q ss_pred             ----------------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCc
Q 022103          263 ----------------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDP  296 (302)
Q Consensus       263 ----------------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  296 (302)
                                            ....++++|..++.++.. +   ..|..|...++
T Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~-~---~~g~~~~i~~~  255 (348)
T 1oc2_A          204 RQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAILTK-G---RMGETYLIGAD  255 (348)
T ss_dssp             HHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHHHHHHHH-C---CTTCEEEECCS
T ss_pred             HHHHHHHcCCCceEecCCCceEeeEEHHHHHHHHHHHhhC-C---CCCCeEEeCCC
Confidence                                  114579999999998863 2   35766766654

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.84  E-value=1e-19  Score=167.06  Aligned_cols=220  Identities=17%  Similarity=0.050  Sum_probs=152.4

Q ss_pred             cccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHH-HHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHh
Q 022103           25 KWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQ-RAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKS  103 (302)
Q Consensus        25 ~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~-~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~  103 (302)
                      ....++++||||||+|+||+++++.|+++|++|++++|+..+.. ...+.+. ....+.++.+|++|.+++.++++.+  
T Consensus         9 ~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~--   85 (335)
T 1rpn_A            9 HHGSMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELG-IEGDIQYEDGDMADACSVQRAVIKA--   85 (335)
T ss_dssp             ------CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTT-CGGGEEEEECCTTCHHHHHHHHHHH--
T ss_pred             cccccCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhcc-ccCceEEEECCCCCHHHHHHHHHHc--
Confidence            34567889999999999999999999999999999999865421 1122221 1346889999999999999998876  


Q ss_pred             hCCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCC-CCcEEEecCCCcccccccCcccccc
Q 022103          104 NFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPS-KSRILNISSRLGTLSKVRNPNIKSI  182 (302)
Q Consensus       104 ~~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~-~~~iv~vsS~~~~~~~~~~~~~~~~  182 (302)
                         ++|+|||+||.....   .+.++++..+++|+.++.++++++.+.     + .++||++||...+......+     
T Consensus        86 ---~~d~Vih~A~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~~~~-----~~~~~~v~~SS~~v~g~~~~~~-----  149 (335)
T 1rpn_A           86 ---QPQEVYNLAAQSFVG---ASWNQPVTTGVVDGLGVTHLLEAIRQF-----SPETRFYQASTSEMFGLIQAER-----  149 (335)
T ss_dssp             ---CCSEEEECCSCCCHH---HHTTSHHHHHHHHTHHHHHHHHHHHHH-----CTTSEEEEEEEGGGGCSCSSSS-----
T ss_pred             ---CCCEEEECccccchh---hhhhChHHHHHHHHHHHHHHHHHHHHh-----CCCCeEEEEeCHHHhCCCCCCC-----
Confidence               689999999975321   123457789999999999999998764     3 37999999976543221110     


Q ss_pred             cchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCC-
Q 022103          183 LEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG-  261 (302)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~-  261 (302)
                                                ..+...+.+...|+.+|.+.+.+++.++.++   |+++..+.|+.+..+.... 
T Consensus       150 --------------------------~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~v~Gp~~~~~  200 (335)
T 1rpn_A          150 --------------------------QDENTPFYPRSPYGVAKLYGHWITVNYRESF---GLHASSGILFNHESPLRGIE  200 (335)
T ss_dssp             --------------------------BCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTSCTT
T ss_pred             --------------------------CCcccCCCCCChhHHHHHHHHHHHHHHHHHc---CCcEEEEeeCcccCCCCCCC
Confidence                                      0011112234689999999999999999874   6788888887765542111 


Q ss_pred             ----------------------C-------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCc
Q 022103          262 ----------------------Q-------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDP  296 (302)
Q Consensus       262 ----------------------~-------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  296 (302)
                                            .       ..+..+++|..++.++..+ .   .+.+.+..+.
T Consensus       201 ~~~~~~~~~~~~~~~g~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~-~---~~~~ni~~~~  260 (335)
T 1rpn_A          201 FVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQD-K---ADDYVVATGV  260 (335)
T ss_dssp             SHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHHHHSS-S---CCCEEECCSC
T ss_pred             cchHHHHHHHHHHHcCCCceEEeCCCcceeceEEHHHHHHHHHHHHhcC-C---CCEEEEeCCC
Confidence                                  0       1145699999999988632 2   2555554443

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.83  E-value=8.6e-20  Score=170.99  Aligned_cols=219  Identities=18%  Similarity=0.100  Sum_probs=150.3

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhh-----HHHHHHHHhhCCC-ceeEEEeeCCCHHHHHHHHHHHHhh
Q 022103           31 TIAIVTGANKGIGFALVKRLAELGLTVILTARDVER-----GQRAVESLSEKGL-PVNFFQLDVSDPSSIEAFVSWFKSN  104 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~-----~~~~~~~l~~~~~-~~~~~~~Dlt~~~~~~~~~~~~~~~  104 (302)
                      |+||||||+|+||.++++.|+++|++|++++|+.++     ++.....+...+. ++.++.+|++|.+++.++++.+   
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---  105 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVI---  105 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHH---
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhc---
Confidence            789999999999999999999999999999998653     2222222211123 6888999999999999998876   


Q ss_pred             CCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccc
Q 022103          105 FAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILE  184 (302)
Q Consensus       105 ~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~  184 (302)
                        ++|+|||+||.....   .+.++++..+++|+.++.++++++.+...++...++||++||...+..... +       
T Consensus       106 --~~d~Vih~A~~~~~~---~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~-~-------  172 (381)
T 1n7h_A          106 --KPDEVYNLAAQSHVA---VSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPP-P-------  172 (381)
T ss_dssp             --CCSEEEECCSCCCHH---HHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCS-S-------
T ss_pred             --CCCEEEECCcccCcc---ccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCC-C-------
Confidence              689999999975321   345678899999999999999999997655323579999999765422111 0       


Q ss_pred             hhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEE------EEeecCcccCC-
Q 022103          185 DEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISV------NSYCPGFTQTS-  257 (302)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V------~~v~PG~v~T~-  257 (302)
                                              ..+...+.+...|+.+|++.+.+++.++.++   |+.+      +.+.||...+. 
T Consensus       173 ------------------------~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~~r~~~~~gp~~~~~~~  225 (381)
T 1n7h_A          173 ------------------------QSETTPFHPRSPYAASKCAAHWYTVNYREAY---GLFACNGILFNHESPRRGENFV  225 (381)
T ss_dssp             ------------------------BCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCTTSH
T ss_pred             ------------------------CCCCCCCCCCCchHHHHHHHHHHHHHHHHHh---CCcEEEEEeCceeCCCCCCcch
Confidence                                    0011112334789999999999999999875   3433      33444432210 


Q ss_pred             ----------------CC---CC----CCCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCc
Q 022103          258 ----------------MT---QG----QGSHTADEAADVGARLLLLHPQQLPTAKFYIGLDP  296 (302)
Q Consensus       258 ----------------~~---~~----~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  296 (302)
                                      ..   .+    ......+++|..++.++.. +.   .+.+.+..+.
T Consensus       226 ~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~-~~---~~~~~i~~~~  283 (381)
T 1n7h_A          226 TRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEAMWLMLQQ-EK---PDDYVVATEE  283 (381)
T ss_dssp             HHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHHHHHHHHHHTS-SS---CCEEEECCSC
T ss_pred             hHHHHHHHHHHHcCCCCeEEeCCCCceeeeEEHHHHHHHHHHHHhC-CC---CCeEEeeCCC
Confidence                            00   00    1135689999999999863 22   2555555443

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.83  E-value=8.8e-20  Score=160.45  Aligned_cols=193  Identities=13%  Similarity=0.113  Sum_probs=131.2

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcC-CEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELG-LTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G-~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      +..|+++||||+|+||++++++|+++| ++|++++|+.++++..      ....+.++.+|++|.++++++++       
T Consensus        21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~------~~~~~~~~~~Dl~d~~~~~~~~~-------   87 (236)
T 3qvo_A           21 GHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKP------YPTNSQIIMGDVLNHAALKQAMQ-------   87 (236)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSS------CCTTEEEEECCTTCHHHHHHHHT-------
T ss_pred             CcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhccc------ccCCcEEEEecCCCHHHHHHHhc-------
Confidence            345899999999999999999999999 8999999998764321      12468899999999999988876       


Q ss_pred             CccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchh
Q 022103          107 ALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDE  186 (302)
Q Consensus       107 ~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~  186 (302)
                      .+|+||||+|..       +.              ...++.+++.|++. +.++||++||..+..+.+....        
T Consensus        88 ~~D~vv~~a~~~-------~~--------------~~~~~~~~~~~~~~-~~~~iV~iSS~~~~~~~~~~~~--------  137 (236)
T 3qvo_A           88 GQDIVYANLTGE-------DL--------------DIQANSVIAAMKAC-DVKRLIFVLSLGIYDEVPGKFV--------  137 (236)
T ss_dssp             TCSEEEEECCST-------TH--------------HHHHHHHHHHHHHT-TCCEEEEECCCCC-----------------
T ss_pred             CCCEEEEcCCCC-------ch--------------hHHHHHHHHHHHHc-CCCEEEEEecceecCCCCcccc--------
Confidence            579999999862       11              12356777878776 5789999999887543321100        


Q ss_pred             hhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC----
Q 022103          187 ELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ----  262 (302)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~----  262 (302)
                                           .+.....+.....|..+|..           +.+.||+++.|+||++.++.....    
T Consensus       138 ---------------------~~~~~~~~~~~~~~~~~~~~-----------l~~~gi~~~~vrPg~i~~~~~~~~~~~~  185 (236)
T 3qvo_A          138 ---------------------EWNNAVIGEPLKPFRRAADA-----------IEASGLEYTILRPAWLTDEDIIDYELTS  185 (236)
T ss_dssp             ----------------------------CGGGHHHHHHHHH-----------HHTSCSEEEEEEECEEECCSCCCCEEEC
T ss_pred             ---------------------cchhhcccchHHHHHHHHHH-----------HHHCCCCEEEEeCCcccCCCCcceEEec
Confidence                                 00001111122334443322           235799999999999988764431    


Q ss_pred             ------C-CCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          263 ------G-SHTADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       263 ------~-~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                            + ..+++++|..+++++. ++..+. |+.|...++.
T Consensus       186 ~~~~~~~~~i~~~DvA~~i~~ll~-~~~~~~-g~~~~i~~~~  225 (236)
T 3qvo_A          186 RNEPFKGTIVSRKSVAALITDIID-KPEKHI-GENIGINQPG  225 (236)
T ss_dssp             TTSCCSCSEEEHHHHHHHHHHHHH-STTTTT-TEEEEEECSS
T ss_pred             cCCCCCCcEECHHHHHHHHHHHHc-Cccccc-CeeEEecCCC
Confidence                  1 2678999999999998 455445 6666655553

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=99.83  E-value=4.4e-20  Score=169.86  Aligned_cols=205  Identities=18%  Similarity=0.134  Sum_probs=146.7

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCccEE
Q 022103           32 IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDIL  111 (302)
Q Consensus        32 ~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id~l  111 (302)
                      +++||||+|+||++++++|+++|++|++++|+.++.+.    +..  .++.++.+|++|.+++.++++       .+|+|
T Consensus        15 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----l~~--~~~~~~~~Dl~d~~~~~~~~~-------~~d~v   81 (342)
T 2x4g_A           15 KYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQR----LAY--LEPECRVAEMLDHAGLERALR-------GLDGV   81 (342)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGG----GGG--GCCEEEECCTTCHHHHHHHTT-------TCSEE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhh----hcc--CCeEEEEecCCCHHHHHHHHc-------CCCEE
Confidence            79999999999999999999999999999998765432    221  257889999999998887765       58999


Q ss_pred             EEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhhcHH
Q 022103          112 VNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEE  191 (302)
Q Consensus       112 v~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~  191 (302)
                      ||+||...     .+.+++++.+++|+.++.++++++.+.     +.++||++||............   . +       
T Consensus        82 ih~a~~~~-----~~~~~~~~~~~~n~~~~~~l~~a~~~~-----~~~~~v~~SS~~~~~~~~~~~~---~-~-------  140 (342)
T 2x4g_A           82 IFSAGYYP-----SRPRRWQEEVASALGQTNPFYAACLQA-----RVPRILYVGSAYAMPRHPQGLP---G-H-------  140 (342)
T ss_dssp             EEC-----------------CHHHHHHHHHHHHHHHHHHH-----TCSCEEEECCGGGSCCCTTSSC---B-C-------
T ss_pred             EECCccCc-----CCCCCHHHHHHHHHHHHHHHHHHHHHc-----CCCeEEEECCHHhhCcCCCCCC---C-C-------
Confidence            99999643     234567889999999999999999874     3589999999876543221000   0 0       


Q ss_pred             HHHHHHHHHHhhhccCCCCCCCCCcc----cccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCC-CC-C---
Q 022103          192 QIERFVGLFLQSVKDGTWKSQGWPEI----WTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMT-QG-Q---  262 (302)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~-~~-~---  262 (302)
                                         +...+.+    ...|+.+|.+.|.+++.++.   . |++++.|.||.+.++.. .. .   
T Consensus       141 -------------------E~~~~~p~~~~~~~Y~~sK~~~e~~~~~~~~---~-g~~~~ilrp~~v~g~~~~~~~~~~~  197 (342)
T 2x4g_A          141 -------------------EGLFYDSLPSGKSSYVLCKWALDEQAREQAR---N-GLPVVIGIPGMVLGELDIGPTTGRV  197 (342)
T ss_dssp             -------------------TTCCCSSCCTTSCHHHHHHHHHHHHHHHHHH---T-TCCEEEEEECEEECSCCSSCSTTHH
T ss_pred             -------------------CCCCCCccccccChHHHHHHHHHHHHHHHhh---c-CCcEEEEeCCceECCCCccccHHHH
Confidence                               0111112    47899999999999999986   3 89999999999998765 20 0   


Q ss_pred             ------C-----------CCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          263 ------G-----------SHTADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       263 ------~-----------~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                            +           ...++++|..++.++..+.   . |..|...++.
T Consensus       198 ~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~---~-g~~~~v~~~~  245 (342)
T 2x4g_A          198 ITAIGNGEMTHYVAGQRNVIDAAEAGRGLLMALERGR---I-GERYLLTGHN  245 (342)
T ss_dssp             HHHHHTTCCCEEECCEEEEEEHHHHHHHHHHHHHHSC---T-TCEEEECCEE
T ss_pred             HHHHHcCCCccccCCCcceeeHHHHHHHHHHHHhCCC---C-CceEEEcCCc
Confidence                  1           2468999999999987432   1 6666665543

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=99.83  E-value=4e-20  Score=168.48  Aligned_cols=175  Identities=21%  Similarity=0.184  Sum_probs=131.4

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCccEE
Q 022103           32 IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDIL  111 (302)
Q Consensus        32 ~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id~l  111 (302)
                      +++||||+|+||++++++|+++|++|++++|......   ..+   ...+.++.+|++|.+++.+++++.     .+|+|
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~---~~~---~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~v   70 (311)
T 2p5y_A            2 RVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKR---ENV---PKGVPFFRVDLRDKEGVERAFREF-----RPTHV   70 (311)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCG---GGS---CTTCCEECCCTTCHHHHHHHHHHH-----CCSEE
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCch---hhc---ccCeEEEECCCCCHHHHHHHHHhc-----CCCEE
Confidence            5999999999999999999999999999998542211   011   135678899999999999888753     68999


Q ss_pred             EEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCccccc-ccCcccccccchhhhcH
Q 022103          112 VNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSK-VRNPNIKSILEDEELSE  190 (302)
Q Consensus       112 v~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~-~~~~~~~~~~~~~~~~~  190 (302)
                      +|+||.....   .+.++++..+++|+.+++++++++..    . ..++||++||..+..+. ....             
T Consensus        71 i~~a~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~~~----~-~~~~iv~~SS~~~~~g~~~~~~-------------  129 (311)
T 2p5y_A           71 SHQAAQASVK---VSVEDPVLDFEVNLLGGLNLLEACRQ----Y-GVEKLVFASTGGAIYGEVPEGE-------------  129 (311)
T ss_dssp             EECCSCCCHH---HHHHCHHHHHHHHTHHHHHHHHHHHH----T-TCSEEEEEEEHHHHHCCCCTTC-------------
T ss_pred             EECccccCch---hhhhCHHHHHHHHHHHHHHHHHHHHH----h-CCCEEEEeCCChhhcCCCCCCC-------------
Confidence            9999975321   34567788999999999999998864    2 35799999997332221 1000             


Q ss_pred             HHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCC
Q 022103          191 EQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSM  258 (302)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~  258 (302)
                                       +..+...+.+...|+.||++.+.+++.++.+   .|++++.|.|+.+.++.
T Consensus       130 -----------------~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~Gp~  177 (311)
T 2p5y_A          130 -----------------RAEETWPPRPKSPYAASKAAFEHYLSVYGQS---YGLKWVSLRYGNVYGPR  177 (311)
T ss_dssp             -----------------CBCTTSCCCCCSHHHHHHHHHHHHHHHHHHH---HCCCEEEEEECEEECTT
T ss_pred             -----------------CcCCCCCCCCCChHHHHHHHHHHHHHHHHHH---cCCCEEEEeeccccCcC
Confidence                             0000111223478999999999999999987   48999999999998875

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=99.83  E-value=8.2e-20  Score=168.07  Aligned_cols=212  Identities=17%  Similarity=0.140  Sum_probs=153.3

Q ss_pred             EEEEeCCCchHHHHHHHHHHHc---C---CEEEEEecChhh-HHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhh
Q 022103           32 IAIVTGANKGIGFALVKRLAEL---G---LTVILTARDVER-GQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSN  104 (302)
Q Consensus        32 ~vlItGas~gIG~ala~~l~~~---G---~~V~l~~r~~~~-~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~  104 (302)
                      +++||||+|+||++++++|+++   |   ++|++++|+... .....+.+. .+.++.++.+|++|.+++.+++      
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~------   74 (337)
T 1r6d_A            2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVD-ADPRLRFVHGDIRDAGLLAREL------   74 (337)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGT-TCTTEEEEECCTTCHHHHHHHT------
T ss_pred             eEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhcc-cCCCeEEEEcCCCCHHHHHHHh------
Confidence            5999999999999999999997   8   999999986421 011111121 1347889999999999887776      


Q ss_pred             CCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccc
Q 022103          105 FAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILE  184 (302)
Q Consensus       105 ~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~  184 (302)
                       ..+|+|||+||....   ..+.++++..+++|+.++.++++++.+.     ..++||++||...+......        
T Consensus        75 -~~~d~Vih~A~~~~~---~~~~~~~~~~~~~Nv~~~~~l~~a~~~~-----~~~~~v~~SS~~vyg~~~~~--------  137 (337)
T 1r6d_A           75 -RGVDAIVHFAAESHV---DRSIAGASVFTETNVQGTQTLLQCAVDA-----GVGRVVHVSTNQVYGSIDSG--------  137 (337)
T ss_dssp             -TTCCEEEECCSCCCH---HHHHHCCHHHHHHHTHHHHHHHHHHHHT-----TCCEEEEEEEGGGGCCCSSS--------
T ss_pred             -cCCCEEEECCCccCc---hhhhhCHHHHHHHHHHHHHHHHHHHHHc-----CCCEEEEecchHHhCCCCCC--------
Confidence             379999999997532   1234567789999999999999999775     35799999997654221110        


Q ss_pred             hhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC--
Q 022103          185 DEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ--  262 (302)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~--  262 (302)
                                             .+.+...+.+...|+.+|++.+.+++.++.+   .|++++.+.|+.+.++.....  
T Consensus       138 -----------------------~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~g~~~~ilrp~~v~G~~~~~~~~  191 (337)
T 1r6d_A          138 -----------------------SWTESSPLEPNSPYAASKAGSDLVARAYHRT---YGLDVRITRCCNNYGPYQHPEKL  191 (337)
T ss_dssp             -----------------------CBCTTSCCCCCSHHHHHHHHHHHHHHHHHHH---HCCCEEEEEECEEECTTCCTTSH
T ss_pred             -----------------------CCCCCCCCCCCCchHHHHHHHHHHHHHHHHH---HCCCEEEEEeeeeECCCCCCCCh
Confidence                                   0011111233578999999999999999987   479999999999988764310  


Q ss_pred             -----------------C-------CCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          263 -----------------G-------SHTADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       263 -----------------~-------~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                                       +       ...++++|..++.++..+    ..|..|...++.
T Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~----~~g~~~~v~~~~  246 (337)
T 1r6d_A          192 IPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGG----RAGEIYHIGGGL  246 (337)
T ss_dssp             HHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHC----CTTCEEEECCCC
T ss_pred             HHHHHHHHhcCCCcEEeCCCCeeEeeEeHHHHHHHHHHHHhCC----CCCCEEEeCCCC
Confidence                             0       145799999999988632    256666666553

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.83  E-value=1.2e-19  Score=167.45  Aligned_cols=182  Identities=16%  Similarity=0.133  Sum_probs=134.4

Q ss_pred             CcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhh------HHHHHHHHhh-CCCceeEEEeeCCCHHHHHHHHHHHH
Q 022103           30 ETIAIVTGANKGIGFALVKRLAELGLTVILTARDVER------GQRAVESLSE-KGLPVNFFQLDVSDPSSIEAFVSWFK  102 (302)
Q Consensus        30 ~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~------~~~~~~~l~~-~~~~~~~~~~Dlt~~~~~~~~~~~~~  102 (302)
                      +++++||||+|+||++++++|+++|++|++++|+...      ..+..+++.+ .+.++.++.+|++|.+++.+++++. 
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~-   80 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKY-   80 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHC-
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHhc-
Confidence            4789999999999999999999999999999886432      2222233322 2346889999999999998888753 


Q ss_pred             hhCCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccc
Q 022103          103 SNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSI  182 (302)
Q Consensus       103 ~~~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~  182 (302)
                          .+|+|||+||.....   .+.++++..+++|+.++.++++++..    . +.++||++||..........+     
T Consensus        81 ----~~d~vih~A~~~~~~---~~~~~~~~~~~~n~~~~~~l~~~~~~----~-~~~~iv~~SS~~~~g~~~~~~-----  143 (348)
T 1ek6_A           81 ----SFMAVIHFAGLKAVG---ESVQKPLDYYRVNLTGTIQLLEIMKA----H-GVKNLVFSSSATVYGNPQYLP-----  143 (348)
T ss_dssp             ----CEEEEEECCSCCCHH---HHHHCHHHHHHHHHHHHHHHHHHHHH----T-TCCEEEEEEEGGGGCSCSSSS-----
T ss_pred             ----CCCEEEECCCCcCcc---chhhchHHHHHHHHHHHHHHHHHHHH----h-CCCEEEEECcHHHhCCCCCCC-----
Confidence                699999999975321   24466788999999999999987643    2 457999999976542211100     


Q ss_pred             cchhhhcHHHHHHHHHHHHhhhccCCCCCCCCC-cccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCC
Q 022103          183 LEDEELSEEQIERFVGLFLQSVKDGTWKSQGWP-EIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTS  257 (302)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~  257 (302)
                                                ..+...+ +....|+.+|++++.+++.++.+  ..++++..+.|+.+..+
T Consensus       144 --------------------------~~E~~~~~p~~~~Y~~sK~~~e~~~~~~~~~--~~~~~~~~lR~~~v~G~  191 (348)
T 1ek6_A          144 --------------------------LDEAHPTGGCTNPYGKSKFFIEEMIRDLCQA--DKTWNAVLLRYFNPTGA  191 (348)
T ss_dssp             --------------------------BCTTSCCCCCSSHHHHHHHHHHHHHHHHHHH--CTTCEEEEEEECEEECC
T ss_pred             --------------------------cCCCCCCCCCCCchHHHHHHHHHHHHHHHhc--CCCcceEEEeeccccCC
Confidence                                      0000011 12478999999999999999987  34699999999888655

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=99.83  E-value=1.4e-19  Score=165.06  Aligned_cols=205  Identities=15%  Similarity=0.068  Sum_probs=147.9

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCccE
Q 022103           31 TIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDI  110 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id~  110 (302)
                      ++||||||+|+||++++++|+++|..|++..|+....+.       ....+.++.+|+++ +++.++++       .+|+
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~v~~~~~~~~~~~~-------~~~~~~~~~~Dl~~-~~~~~~~~-------~~d~   66 (313)
T 3ehe_A            2 SLIVVTGGAGFIGSHVVDKLSESNEIVVIDNLSSGNEEF-------VNEAARLVKADLAA-DDIKDYLK-------GAEE   66 (313)
T ss_dssp             -CEEEETTTSHHHHHHHHHHTTTSCEEEECCCSSCCGGG-------SCTTEEEECCCTTT-SCCHHHHT-------TCSE
T ss_pred             CEEEEECCCchHHHHHHHHHHhCCCEEEEEcCCCCChhh-------cCCCcEEEECcCCh-HHHHHHhc-------CCCE
Confidence            479999999999999999999999555554444332211       13468899999999 87877765       6899


Q ss_pred             EEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhhcH
Q 022103          111 LVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSE  190 (302)
Q Consensus       111 lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~  190 (302)
                      |||+|+....   ..+.++++..+++|+.++.++++++...     +.++||++||...+......+             
T Consensus        67 vih~a~~~~~---~~~~~~~~~~~~~nv~~~~~l~~~~~~~-----~~~~iv~~SS~~vyg~~~~~~-------------  125 (313)
T 3ehe_A           67 VWHIAANPDV---RIGAENPDEIYRNNVLATYRLLEAMRKA-----GVSRIVFTSTSTVYGEAKVIP-------------  125 (313)
T ss_dssp             EEECCCCCCC---C-CCCCHHHHHHHHHHHHHHHHHHHHHH-----TCCEEEEECCGGGGCSCSSSS-------------
T ss_pred             EEECCCCCCh---hhhhhCHHHHHHHHHHHHHHHHHHHHHc-----CCCeEEEeCchHHhCcCCCCC-------------
Confidence            9999996532   3456678889999999999999986543     457999999976653221110             


Q ss_pred             HHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC--------
Q 022103          191 EQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ--------  262 (302)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~--------  262 (302)
                                        ..+...+.+...|+.+|.+.+.+++.++.+   .|++++.+.|+.+.++.....        
T Consensus       126 ------------------~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~g~~~~ilRp~~v~G~~~~~~~~~~~~~~  184 (313)
T 3ehe_A          126 ------------------TPEDYPTHPISLYGASKLACEALIESYCHT---FDMQAWIYRFANVIGRRSTHGVIYDFIMK  184 (313)
T ss_dssp             ------------------BCTTSCCCCCSHHHHHHHHHHHHHHHHHHH---TTCEEEEEECSCEESTTCCCSHHHHHHHH
T ss_pred             ------------------CCCCCCCCCCCHHHHHHHHHHHHHHHHHHh---cCCCEEEEeeccccCcCCCcChHHHHHHH
Confidence                              001111233578999999999999999988   489999999999988753310        


Q ss_pred             ------------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCc
Q 022103          263 ------------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDP  296 (302)
Q Consensus       263 ------------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  296 (302)
                                        ..+..+++|..++.++. +.   ..|..|...++
T Consensus       185 ~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~-~~---~~~~~~ni~~~  232 (313)
T 3ehe_A          185 LKRNPEELEILGNGEQNKSYIYISDCVDAMLFGLR-GD---ERVNIFNIGSE  232 (313)
T ss_dssp             HHHCTTEEEESTTSCCEECCEEHHHHHHHHHHHTT-CC---SSEEEEECCCS
T ss_pred             HHcCCCceEEeCCCCeEEeEEEHHHHHHHHHHHhc-cC---CCCceEEECCC
Confidence                              12557899999999886 22   34566655554

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=99.82  E-value=2.2e-19  Score=168.61  Aligned_cols=209  Identities=16%  Similarity=0.008  Sum_probs=150.6

Q ss_pred             cccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhh
Q 022103           25 KWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSN  104 (302)
Q Consensus        25 ~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~  104 (302)
                      .+..++++++||||+|+||++++++|+++|++|++++|+..+...    .  ....+.++.+|++|.+++.++++     
T Consensus        24 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~--~~~~v~~~~~Dl~d~~~~~~~~~-----   92 (379)
T 2c5a_A           24 YWPSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMT----E--DMFCDEFHLVDLRVMENCLKVTE-----   92 (379)
T ss_dssp             SCTTSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSC----G--GGTCSEEEECCTTSHHHHHHHHT-----
T ss_pred             cccccCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchh----h--ccCCceEEECCCCCHHHHHHHhC-----
Confidence            344567899999999999999999999999999999998654221    0  12367889999999999888775     


Q ss_pred             CCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccc
Q 022103          105 FAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILE  184 (302)
Q Consensus       105 ~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~  184 (302)
                        .+|+|||+||.....  ..+.++++..+++|+.++.++++++...     +.++||++||...+.............+
T Consensus        93 --~~d~Vih~A~~~~~~--~~~~~~~~~~~~~Nv~g~~~ll~a~~~~-----~~~~~V~~SS~~v~~~~~~~~~~~~~~~  163 (379)
T 2c5a_A           93 --GVDHVFNLAADMGGM--GFIQSNHSVIMYNNTMISFNMIEAARIN-----GIKRFFYASSACIYPEFKQLETTNVSLK  163 (379)
T ss_dssp             --TCSEEEECCCCCCCH--HHHTTCHHHHHHHHHHHHHHHHHHHHHT-----TCSEEEEEEEGGGSCGGGSSSSSSCEEC
T ss_pred             --CCCEEEECceecCcc--cccccCHHHHHHHHHHHHHHHHHHHHHc-----CCCEEEEEeehheeCCCCCCCccCCCcC
Confidence              689999999975321  1113567889999999999999998642     4579999999765432111000000000


Q ss_pred             hhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC--
Q 022103          185 DEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ--  262 (302)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~--  262 (302)
                      ++.                     +   ..+.+...|+.+|.+.+.+++.++.+   .|++++.|+||.+.++.....  
T Consensus       164 E~~---------------------~---~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gi~~~ilrp~~v~G~~~~~~~~  216 (379)
T 2c5a_A          164 ESD---------------------A---WPAEPQDAFGLEKLATEELCKHYNKD---FGIECRIGRFHNIYGPFGTWKGG  216 (379)
T ss_dssp             GGG---------------------G---SSBCCSSHHHHHHHHHHHHHHHHHHH---HCCEEEEEEECCEECTTSCCSSS
T ss_pred             ccc---------------------C---CCCCCCChhHHHHHHHHHHHHHHHHH---HCCCEEEEEeCceeCcCCCcccc
Confidence            000                     0   01223468999999999999999987   489999999999988753210  


Q ss_pred             -----------------------------CCCCHHHHHHHHHHHhhc
Q 022103          263 -----------------------------GSHTADEAADVGARLLLL  280 (302)
Q Consensus       263 -----------------------------~~~~~~~~a~~~~~l~~~  280 (302)
                                                   .....+++|..++.++..
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~  263 (379)
T 2c5a_A          217 REKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTKS  263 (379)
T ss_dssp             CCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHHHHHHHS
T ss_pred             cccHHHHHHHHHHhCCCceEEeCCCCeeEEEEEHHHHHHHHHHHhhc
Confidence                                         114479999999998863

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.82  E-value=1.1e-19  Score=173.23  Aligned_cols=216  Identities=12%  Similarity=0.061  Sum_probs=150.1

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChh---hHHHHHHHHhh---------CCCceeEEEeeCCCHHHHH
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVE---RGQRAVESLSE---------KGLPVNFFQLDVSDPSSIE   95 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~---~~~~~~~~l~~---------~~~~~~~~~~Dlt~~~~~~   95 (302)
                      +++++||||||+|+||++++++|++.|++|++++|+..   ..+...+.+..         ...++.++.+|++|.+++.
T Consensus        67 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~  146 (427)
T 4f6c_A           67 RPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV  146 (427)
T ss_dssp             CCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCCC
T ss_pred             CCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccCC
Confidence            55789999999999999999999999999999999976   33333333322         1357899999999988776


Q ss_pred             HHHHHHHhhCCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCccccccc
Q 022103           96 AFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVR  175 (302)
Q Consensus        96 ~~~~~~~~~~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~  175 (302)
                              .++.+|+||||||...      ..+.++..+++|+.++.++++++.+      ..++||++||...  +...
T Consensus       147 --------~~~~~d~Vih~A~~~~------~~~~~~~~~~~Nv~g~~~l~~aa~~------~~~~~v~~SS~~~--G~~~  204 (427)
T 4f6c_A          147 --------LPENMDTIIHAGARTD------HFGDDDEFEKVNVQGTVDVIRLAQQ------HHARLIYVSTISV--GTYF  204 (427)
T ss_dssp             --------CSSCCSEEEECCCCC-------------CHHHHHHHHHHHHHHHHHH------TTCEEEEEEEGGG--GSEE
T ss_pred             --------CcCCCCEEEECCcccC------CCCCHHHHHHHHHHHHHHHHHHHHh------cCCcEEEECchHh--CCCc
Confidence                    4578999999999763      2356788999999999999999976      2479999999876  3221


Q ss_pred             Cc-ccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcc
Q 022103          176 NP-NIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFT  254 (302)
Q Consensus       176 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v  254 (302)
                      .. ......+++.                     +.  ..+.....|+.+|.+.|.+++.++.    .|++++.|.||.|
T Consensus       205 ~~~~~~~~~~E~~---------------------~~--~~~~~~~~Y~~sK~~~E~~~~~~~~----~g~~~~ivRpg~v  257 (427)
T 4f6c_A          205 DIDTEDVTFSEAD---------------------VY--KGQLLTSPYTRSKFYSELKVLEAVN----NGLDGRIVRVGNL  257 (427)
T ss_dssp             CSSCSCCEECTTC---------------------SC--SSCCCCSHHHHHHHHHHHHHHHHHH----TTCCEEEEEECCE
T ss_pred             cCCCCCccccccc---------------------cc--cCCCCCCchHHHHHHHHHHHHHHHH----cCCCEEEEeCCee
Confidence            00 0000000000                     00  0022457899999999999999764    5899999999999


Q ss_pred             cCCCCCCC--------------------------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCc
Q 022103          255 QTSMTQGQ--------------------------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDP  296 (302)
Q Consensus       255 ~T~~~~~~--------------------------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  296 (302)
                      .++.....                                .....+++|..++.++..+ .   .|.+|...++
T Consensus       258 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~DvA~ai~~~~~~~-~---~g~~~~l~~~  327 (427)
T 4f6c_A          258 TSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGVSMAEMPVDFSFVDTTARQIVALAQVN-T---PQIIYHVLSP  327 (427)
T ss_dssp             ESCSSSCCCCTTGGGCHHHHHHHHHHHSSEEEHHHHTCEECCEEHHHHHHHHHHHTTSC-C---CCSEEEESCS
T ss_pred             ecCCCCCccccCcchHHHHHHHHHHHhcCCCCCccccceEEEeeHHHHHHHHHHHHcCC-C---CCCEEEecCC
Confidence            88765432                                0245699999999998632 2   5666655544

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.82  E-value=2.9e-19  Score=167.05  Aligned_cols=218  Identities=13%  Similarity=0.018  Sum_probs=152.2

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhh-----HHHHHHHHhh-CCCceeEEEeeCCCHHHHHHHHHHHHhh
Q 022103           31 TIAIVTGANKGIGFALVKRLAELGLTVILTARDVER-----GQRAVESLSE-KGLPVNFFQLDVSDPSSIEAFVSWFKSN  104 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~-----~~~~~~~l~~-~~~~~~~~~~Dlt~~~~~~~~~~~~~~~  104 (302)
                      ++++||||+|+||++++++|+++|++|++++|+...     ++...+.+.. .+.++.++.+|++|.+++.++++.+   
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---  101 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV---  101 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH---
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhc---
Confidence            689999999999999999999999999999998643     2211111110 1346888999999999999998876   


Q ss_pred             CCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccc
Q 022103          105 FAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILE  184 (302)
Q Consensus       105 ~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~  184 (302)
                        ++|+|||+||.....   .+.++++..+++|+.++.++++++.+...+  ..++||++||..........+       
T Consensus       102 --~~d~vih~A~~~~~~---~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~--~~~~iv~~SS~~~~~~~~~~~-------  167 (375)
T 1t2a_A          102 --KPTEIYNLGAQSHVK---ISFDLAEYTADVDGVGTLRLLDAVKTCGLI--NSVKFYQASTSELYGKVQEIP-------  167 (375)
T ss_dssp             --CCSEEEECCSCCCHH---HHHHSHHHHHHHHTHHHHHHHHHHHHTTCT--TTCEEEEEEEGGGTCSCSSSS-------
T ss_pred             --CCCEEEECCCccccc---ccccCHHHHHHHHHHHHHHHHHHHHHhCCC--ccceEEEecchhhhCCCCCCC-------
Confidence              689999999975321   245678889999999999999999875431  237999999977653221110       


Q ss_pred             hhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCC----
Q 022103          185 DEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ----  260 (302)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~----  260 (302)
                                              ..+...+.+...|+.+|++++.+++.++.++   ++.+..+.|+.+..+...    
T Consensus       168 ------------------------~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~~~gp~~~~~~~  220 (375)
T 1t2a_A          168 ------------------------QKETTPFYPRSPYGAAKLYAYWIVVNFREAY---NLFAVNGILFNHESPRRGANFV  220 (375)
T ss_dssp             ------------------------BCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCTTSH
T ss_pred             ------------------------CCccCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEecccccCCCCCCCcc
Confidence                                    0011112234789999999999999999874   677777776554433110    


Q ss_pred             ----------------C----------CCCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCc
Q 022103          261 ----------------G----------QGSHTADEAADVGARLLLLHPQQLPTAKFYIGLDP  296 (302)
Q Consensus       261 ----------------~----------~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  296 (302)
                                      .          ...+..+++|..++.++.. +.   .+.|.+..+.
T Consensus       221 ~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~a~~~~~~~-~~---~~~~ni~~~~  278 (375)
T 1t2a_A          221 TRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQN-DE---PEDFVIATGE  278 (375)
T ss_dssp             HHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHHHHHHHHHS-SS---CCCEEECCSC
T ss_pred             hHHHHHHHHHHHcCCCceeEeCCCCceeeeEEHHHHHHHHHHHHhc-CC---CceEEEeCCC
Confidence                            0          0125689999999988863 22   3566665544

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.82  E-value=2.2e-19  Score=165.54  Aligned_cols=223  Identities=17%  Similarity=0.144  Sum_probs=154.6

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcC-------CEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHH
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELG-------LTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFV   98 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G-------~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~   98 (302)
                      +.+++++|+||||+|+||.+++++|+++|       ++|++++|+.++...      ..+.++.++.+|++|.+++.+++
T Consensus        10 ~~~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~------~~~~~~~~~~~Dl~d~~~~~~~~   83 (342)
T 2hrz_A           10 LYFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA------GFSGAVDARAADLSAPGEAEKLV   83 (342)
T ss_dssp             SCCSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT------TCCSEEEEEECCTTSTTHHHHHH
T ss_pred             CCccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc------ccCCceeEEEcCCCCHHHHHHHH
Confidence            34678899999999999999999999999       899999998643221      12346888999999999988877


Q ss_pred             HHHHhhCCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcc
Q 022103           99 SWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPN  178 (302)
Q Consensus        99 ~~~~~~~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~  178 (302)
                      +      +.+|+|||+||....    .+.++++..+++|+.++.++++++.+...+....++||++||..........+ 
T Consensus        84 ~------~~~d~vih~A~~~~~----~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~-  152 (342)
T 2hrz_A           84 E------ARPDVIFHLAAIVSG----EAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLPYP-  152 (342)
T ss_dssp             H------TCCSEEEECCCCCHH----HHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCCSS-
T ss_pred             h------cCCCEEEECCccCcc----cccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCCCCC-
Confidence            5      379999999997531    34567889999999999999999887532211257999999986643221110 


Q ss_pred             cccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHcc--CCCcEEEEee--cCcc
Q 022103          179 IKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYE--GEGISVNSYC--PGFT  254 (302)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~--~~gI~V~~v~--PG~v  254 (302)
                                                    ..+...+.+...|+.+|++.+.+++.++.++.  ...+|++.|.  ||.+
T Consensus       153 ------------------------------~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~  202 (342)
T 2hrz_A          153 ------------------------------IPDEFHTTPLTSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKP  202 (342)
T ss_dssp             ------------------------------BCTTCCCCCSSHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSC
T ss_pred             ------------------------------cCCCCCCCCcchHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCC
Confidence                                          00111122347899999999999999987631  2246676666  7765


Q ss_pred             cCCCC-----------CC------CC------CCCHHHHHHHHHHHhhcCCCCCCCcceeecCC
Q 022103          255 QTSMT-----------QG------QG------SHTADEAADVGARLLLLHPQQLPTAKFYIGLD  295 (302)
Q Consensus       255 ~T~~~-----------~~------~~------~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~  295 (302)
                      .++..           ..      .+      ...++++|..++.++..+......+.+|...+
T Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~~~~~~~~~~~~~~~~~~~~ni~g  266 (342)
T 2hrz_A          203 NAAASGFFSNILREPLVGQEAVLPVPESIRHWHASPRSAVGFLIHGAMIDVEKVGPRRNLSMPG  266 (342)
T ss_dssp             CCSGGGHHHHHHHHHHTTCCEEECSCTTCEEEEECHHHHHHHHHHHHHSCHHHHCSCCEEECCC
T ss_pred             cchhHHHHHHHHHHHhcCCCeeccCCCccceeeEehHHHHHHHHHHHhccccccCCccEEEcCC
Confidence            43210           00      00      25689999999888763321111345555544

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.82  E-value=3e-19  Score=166.32  Aligned_cols=219  Identities=20%  Similarity=0.107  Sum_probs=145.9

Q ss_pred             CcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHH-HHHHHHhh----CCCceeEEEeeCCCHHHHHHHHHHHHhh
Q 022103           30 ETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQ-RAVESLSE----KGLPVNFFQLDVSDPSSIEAFVSWFKSN  104 (302)
Q Consensus        30 ~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~-~~~~~l~~----~~~~~~~~~~Dlt~~~~~~~~~~~~~~~  104 (302)
                      +++++||||+|+||++++++|+++|++|++++|+.+... ...+.+.+    .+.++.++.+|++|.+++.++++.+   
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---   77 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV---   77 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH---
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhc---
Confidence            368999999999999999999999999999999865421 11222211    1346888999999999999998876   


Q ss_pred             CCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccc
Q 022103          105 FAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILE  184 (302)
Q Consensus       105 ~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~  184 (302)
                        ++|+|||+||.....   .+.++++..+++|+.++.++++++.+...+  +.++||++||...+......+       
T Consensus        78 --~~d~vih~A~~~~~~---~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~~iv~~SS~~v~g~~~~~~-------  143 (372)
T 1db3_A           78 --QPDEVYNLGAMSHVA---VSFESPEYTADVDAMGTLRLLEAIRFLGLE--KKTRFYQASTSELYGLVQEIP-------  143 (372)
T ss_dssp             --CCSEEEECCCCCTTT---TTTSCHHHHHHHHTHHHHHHHHHHHHTTCT--TTCEEEEEEEGGGGTTCCSSS-------
T ss_pred             --CCCEEEECCcccCcc---ccccCHHHHHHHHHHHHHHHHHHHHHhCCC--CCcEEEEeCChhhhCCCCCCC-------
Confidence              689999999975432   345667889999999999999999876432  237999999976543221100       


Q ss_pred             hhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCC----
Q 022103          185 DEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ----  260 (302)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~----  260 (302)
                                              ..+...+.+...|+.+|++.+.+++.++.++   |+.+..+.|..+..+...    
T Consensus       144 ------------------------~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~r~~~~~gp~~~~~~~  196 (372)
T 1db3_A          144 ------------------------QKETTPFYPRSPYAVAKLYAYWITVNYRESY---GMYACNGILFNHESPRRGETFV  196 (372)
T ss_dssp             ------------------------BCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTSCTTSH
T ss_pred             ------------------------CCccCCCCCCChHHHHHHHHHHHHHHHHHHh---CCCeEEEEECCccCCCCCCcch
Confidence                                    0011112235789999999999999999874   455555554333222100    


Q ss_pred             -------------C-------------CCCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCc
Q 022103          261 -------------G-------------QGSHTADEAADVGARLLLLHPQQLPTAKFYIGLDP  296 (302)
Q Consensus       261 -------------~-------------~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  296 (302)
                                   .             ......+++|..++.++.. +.   .+.|.+..+.
T Consensus       197 ~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~a~~~~~~~-~~---~~~~ni~~~~  254 (372)
T 1db3_A          197 TRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMMLQQ-EQ---PEDFVIATGV  254 (372)
T ss_dssp             HHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHHHHHTTSS-SS---CCCEEECCCC
T ss_pred             hhHHHHHHHHHHcCCCCceeecCCCceeeeeEHHHHHHHHHHHHhc-CC---CceEEEcCCC
Confidence                         0             1235679999998888753 22   2445444443

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=99.82  E-value=3.4e-19  Score=166.21  Aligned_cols=218  Identities=15%  Similarity=0.099  Sum_probs=156.2

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHc-CCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCC-CHHHHHHHHHHHHhhC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAEL-GLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVS-DPSSIEAFVSWFKSNF  105 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~-G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt-~~~~~~~~~~~~~~~~  105 (302)
                      +++++|+||||+|+||.+++++|+++ |++|++++|+.++......     ..++.++.+|++ |.+.+.++++      
T Consensus        22 m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~-----~~~v~~~~~Dl~~d~~~~~~~~~------   90 (372)
T 3slg_A           22 MKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVK-----HERMHFFEGDITINKEWVEYHVK------   90 (372)
T ss_dssp             -CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGG-----STTEEEEECCTTTCHHHHHHHHH------
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhcc-----CCCeEEEeCccCCCHHHHHHHhc------
Confidence            56689999999999999999999999 9999999998765433211     247899999999 9999988887      


Q ss_pred             CCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccch
Q 022103          106 AALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILED  185 (302)
Q Consensus       106 g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~  185 (302)
                       .+|+|||+||.....   ...++.++.+++|+.++.++++++...     + ++||++||...+......+.    .+ 
T Consensus        91 -~~d~Vih~A~~~~~~---~~~~~~~~~~~~nv~~~~~ll~a~~~~-----~-~~~v~~SS~~vyg~~~~~~~----~e-  155 (372)
T 3slg_A           91 -KCDVILPLVAIATPA---TYVKQPLRVFELDFEANLPIVRSAVKY-----G-KHLVFPSTSEVYGMCADEQF----DP-  155 (372)
T ss_dssp             -HCSEEEECBCCCCHH---HHHHCHHHHHHHHTTTTHHHHHHHHHH-----T-CEEEEECCGGGGBSCCCSSB----CT-
T ss_pred             -cCCEEEEcCccccHH---HHhhCHHHHHHHHHHHHHHHHHHHHHh-----C-CcEEEeCcHHHhCCCCCCCC----Cc-
Confidence             589999999986432   234566788999999999999888654     3 79999999654322111100    00 


Q ss_pred             hhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC---
Q 022103          186 EELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ---  262 (302)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~---  262 (302)
                      +..                   .....+...+...|+.+|.+.|.+++.++.+    |++++.|.|+.+..+.....   
T Consensus       156 ~~~-------------------~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~----g~~~~ilRp~~v~G~~~~~~~~~  212 (372)
T 3slg_A          156 DAS-------------------ALTYGPINKPRWIYACSKQLMDRVIWGYGME----GLNFTLFRPFNWIGPGLDSIYTP  212 (372)
T ss_dssp             TTC-------------------CEEECCTTCTTHHHHHHHHHHHHHHHHHHTT----TCEEEEEEECSEECSSCCCTTCS
T ss_pred             ccc-------------------ccccCCCCCCCCcHHHHHHHHHHHHHHHHHC----CCCEEEEccccccCCCccccccc
Confidence            000                   0000000123457999999999999999865    89999999999987764310   


Q ss_pred             -------------------------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCC
Q 022103          263 -------------------------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLD  295 (302)
Q Consensus       263 -------------------------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~  295 (302)
                                                     ..+..+++|..++.++.. +.....|.+|...+
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~-~~~~~~~~~~ni~~  275 (372)
T 3slg_A          213 KEGSSRVVTQFLGHIVRGENISLVDGGSQKRAFTYVDDGISALMKIIEN-SNGVATGKIYNIGN  275 (372)
T ss_dssp             BSCSCHHHHHHHHHHHHTCCEEEGGGGCCEEECEEHHHHHHHHHHHHHC-GGGTTTTEEEEECC
T ss_pred             ccccchHHHHHHHHHHcCCCcEEeCCCceEEEEEEHHHHHHHHHHHHhc-ccCcCCCceEEeCC
Confidence                                           114679999999999873 33324566666655

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=99.82  E-value=1.3e-19  Score=169.84  Aligned_cols=219  Identities=15%  Similarity=0.054  Sum_probs=153.1

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcC-CEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhh
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELG-LTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSN  104 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G-~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~  104 (302)
                      ..+++++++||||+|+||++++++|+++| ++|++++|+......   .+. ...++.++.+|++|.+++.++++     
T Consensus        28 ~~~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~---~l~-~~~~v~~~~~Dl~d~~~l~~~~~-----   98 (377)
T 2q1s_A           28 SKLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKI---NVP-DHPAVRFSETSITDDALLASLQD-----   98 (377)
T ss_dssp             GGGTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGG---GSC-CCTTEEEECSCTTCHHHHHHCCS-----
T ss_pred             HHhCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchh---hcc-CCCceEEEECCCCCHHHHHHHhh-----
Confidence            34778999999999999999999999999 999999998654211   111 13468899999999988776654     


Q ss_pred             CCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccc
Q 022103          105 FAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILE  184 (302)
Q Consensus       105 ~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~  184 (302)
                        .+|+|||+||.....   .+.++++..+++|+.++.++++++...    +..++||++||...+......+    . +
T Consensus        99 --~~d~Vih~A~~~~~~---~~~~~~~~~~~~nv~~~~~ll~a~~~~----~~~~~~V~~SS~~vyg~~~~~~----~-~  164 (377)
T 2q1s_A           99 --EYDYVFHLATYHGNQ---SSIHDPLADHENNTLTTLKLYERLKHF----KRLKKVVYSAAGCSIAEKTFDD----A-K  164 (377)
T ss_dssp             --CCSEEEECCCCSCHH---HHHHCHHHHHHHHTHHHHHHHHHHTTC----SSCCEEEEEEEC-----------------
T ss_pred             --CCCEEEECCCccCch---hhhhCHHHHHHHHHHHHHHHHHHHHHh----CCCCeEEEeCCHHHcCCCCCCC----c-C
Confidence              789999999975321   234567889999999999999988531    1357999999976542111000    0 0


Q ss_pred             hhhhcHHHHHHHHHHHHhhhccCCCCCCCCC-cccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCC----
Q 022103          185 DEELSEEQIERFVGLFLQSVKDGTWKSQGWP-EIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMT----  259 (302)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~----  259 (302)
                                         .....|..  .+ .+...|+.+|++.|.+++.++.++   |++++.|.||.+.++..    
T Consensus       165 -------------------~~E~~~~~--~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilRp~~v~G~~~~~~~  220 (377)
T 2q1s_A          165 -------------------ATEETDIV--SLHNNDSPYSMSKIFGEFYSVYYHKQH---QLPTVRARFQNVYGPGEILGA  220 (377)
T ss_dssp             ---------------------CCCCCC--CSSCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTCCTTC
T ss_pred             -------------------cccccccc--cccCCCCchHHHHHHHHHHHHHHHHHh---CCCEEEEeeccEECCCCcccc
Confidence                               00000000  11 234789999999999999999874   89999999999988764    


Q ss_pred             -----C------CC------------------------CCCCHHHHHHH-HHHHhhcCCCCCCCcceeecCCc
Q 022103          260 -----Q------GQ------------------------GSHTADEAADV-GARLLLLHPQQLPTAKFYIGLDP  296 (302)
Q Consensus       260 -----~------~~------------------------~~~~~~~~a~~-~~~l~~~~~~~~~~G~~~~~~~~  296 (302)
                           .      ..                        ..+..+++|.. ++.++.. +.   .| .|...++
T Consensus       221 g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~i~~~~~~-~~---~g-~~~i~~~  288 (377)
T 2q1s_A          221 GRWRGTPATVWRNVTPTFIYKALKGMPLPLENGGVATRDFIFVEDVANGLIACAADG-TP---GG-VYNIASG  288 (377)
T ss_dssp             SSCCSSGGGTSCSHHHHHHHHHHTTCCCCCSGGGCCEECCEEHHHHHHHHHHHHHHC-CT---TE-EEECCCC
T ss_pred             cccccCcccccccHHHHHHHHHHcCCCeEEeCCCCeEEeeEEHHHHHHHHHHHHHhc-CC---CC-eEEecCC
Confidence                 2      10                        01347899999 8888873 22   57 6666554

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.82  E-value=3.8e-20  Score=170.41  Aligned_cols=224  Identities=16%  Similarity=0.172  Sum_probs=146.5

Q ss_pred             CcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH--HHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           30 ETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRA--VESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        30 ~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~--~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      ++++|||||+|+||++++++|+++|++|+++.|+.++.+..  ...+. ...++.++.+|++|.+++.++++       .
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~-------~   80 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQ-ELGDLKIFRADLTDELSFEAPIA-------G   80 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHG-GGSCEEEEECCTTTSSSSHHHHT-------T
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcC-CCCcEEEEecCCCChHHHHHHHc-------C
Confidence            68899999999999999999999999999999986542211  12232 22367889999999988877765       5


Q ss_pred             ccEEEEcCCCCCCCCCCCCHHHH-HHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchh
Q 022103          108 LDILVNNAGVSFNDIYKNTVEHA-ETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDE  186 (302)
Q Consensus       108 id~lv~~aG~~~~~~~~~~~e~~-~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~  186 (302)
                      +|+|||+|+....     ..++. ++.+++|+.++.++++++.+..    ..++||++||..+..+...... ....+++
T Consensus        81 ~D~Vih~A~~~~~-----~~~~~~~~~~~~nv~gt~~ll~aa~~~~----~v~r~V~~SS~~~~~~~~~~~~-~~~~~E~  150 (338)
T 2rh8_A           81 CDFVFHVATPVHF-----ASEDPENDMIKPAIQGVVNVMKACTRAK----SVKRVILTSSAAAVTINQLDGT-GLVVDEK  150 (338)
T ss_dssp             CSEEEEESSCCCC--------------CHHHHHHHHHHHHHHHHCT----TCCEEEEECCHHHHHHHHHTCS-CCCCCTT
T ss_pred             CCEEEEeCCccCC-----CCCCcHHHHHHHHHHHHHHHHHHHHHcC----CcCEEEEEecHHHeecCCcCCC-CcccChh
Confidence            7999999986421     12222 4589999999999999987642    2579999999775432211000 0001111


Q ss_pred             hhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC----
Q 022103          187 ELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ----  262 (302)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~----  262 (302)
                      .+....                +.....|+ ...|+.||.+.|.+++.++.+   +|+++++|.|+.+.++.....    
T Consensus       151 ~~~~~~----------------~~~~~~~~-~~~Y~~sK~~~E~~~~~~~~~---~gi~~~~lrp~~v~Gp~~~~~~~~~  210 (338)
T 2rh8_A          151 NWTDIE----------------FLTSAKPP-TWGYPASKTLAEKAAWKFAEE---NNIDLITVIPTLMAGSSLTSDVPSS  210 (338)
T ss_dssp             TTTCC-----------------------CC-CCCCTTSCCHHHHHHHHHHHH---HTCCEEEEEECEEESCCSSSSCCHH
T ss_pred             hccchh----------------hccccCCc-cchHHHHHHHHHHHHHHHHHH---cCCcEEEEeCCceECCCCCCCCCch
Confidence            100000                00000011 126999999999999988865   589999999999999875321    


Q ss_pred             ----------------------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecC
Q 022103          263 ----------------------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGL  294 (302)
Q Consensus       263 ----------------------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~  294 (302)
                                                  ....++++|..++.++.. +  ...|.++..+
T Consensus       211 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~-~--~~~~~~~~~~  267 (338)
T 2rh8_A          211 IGLAMSLITGNEFLINGMKGMQMLSGSVSIAHVEDVCRAHIFVAEK-E--SASGRYICCA  267 (338)
T ss_dssp             HHHHHHHHHTCHHHHHHHHHHHHHHSSEEEEEHHHHHHHHHHHHHC-T--TCCEEEEECS
T ss_pred             HHHHHHHHcCCccccccccccccccCcccEEEHHHHHHHHHHHHcC-C--CcCCcEEEec
Confidence                                        135678888888888763 2  2356655443

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.81  E-value=1.9e-19  Score=165.90  Aligned_cols=207  Identities=14%  Similarity=0.051  Sum_probs=141.4

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      +++++++||||+|+||++++++|+++|++|++++|+.....+   .+.+. .++.++.+|++|.+++.++++..     +
T Consensus        19 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~l~~~-~~~~~~~~Dl~d~~~~~~~~~~~-----~   89 (333)
T 2q1w_A           19 SHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRRE---HLKDH-PNLTFVEGSIADHALVNQLIGDL-----Q   89 (333)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGG---GSCCC-TTEEEEECCTTCHHHHHHHHHHH-----C
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchh---hHhhc-CCceEEEEeCCCHHHHHHHHhcc-----C
Confidence            567899999999999999999999999999999998543211   11111 36788999999999999888752     6


Q ss_pred             ccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhh
Q 022103          108 LDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEE  187 (302)
Q Consensus       108 id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~  187 (302)
                      +|+|||+||.....    +.++++  +++|+.++.++++++.+.     +.++||++||.......+....         
T Consensus        90 ~D~vih~A~~~~~~----~~~~~~--~~~N~~~~~~l~~a~~~~-----~~~~iV~~SS~~~~g~~~~~~~---------  149 (333)
T 2q1w_A           90 PDAVVHTAASYKDP----DDWYND--TLTNCVGGSNVVQAAKKN-----NVGRFVYFQTALCYGVKPIQQP---------  149 (333)
T ss_dssp             CSEEEECCCCCSCT----TCHHHH--HHHHTHHHHHHHHHHHHT-----TCSEEEEEEEGGGGCSCCCSSS---------
T ss_pred             CcEEEECceecCCC----ccCChH--HHHHHHHHHHHHHHHHHh-----CCCEEEEECcHHHhCCCcccCC---------
Confidence            99999999976432    334555  999999999999999762     4589999999765421000000         


Q ss_pred             hcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHH-HHHHccCCCcEEEEeecCcccCCCC-------
Q 022103          188 LSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMV-LAKRYEGEGISVNSYCPGFTQTSMT-------  259 (302)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~-la~e~~~~gI~V~~v~PG~v~T~~~-------  259 (302)
                                         + ..+....+.+..|+.+|++.+.+++. ++        ++..|.|+.+..+..       
T Consensus       150 -------------------~-~~~E~~~p~~~~Y~~sK~~~E~~~~~s~~--------~~~ilR~~~v~gp~~~~~~~~~  201 (333)
T 2q1w_A          150 -------------------V-RLDHPRNPANSSYAISKSANEDYLEYSGL--------DFVTFRLANVVGPRNVSGPLPI  201 (333)
T ss_dssp             -------------------B-CTTSCCCCTTCHHHHHHHHHHHHHHHHTC--------CEEEEEESEEESTTCCSSHHHH
T ss_pred             -------------------C-CcCCCCCCCCCchHHHHHHHHHHHHhhhC--------CeEEEeeceEECcCCcCcHHHH
Confidence                               0 00000011126799999999999988 65        344455554433320       


Q ss_pred             ------C---------CCCCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCc
Q 022103          260 ------Q---------GQGSHTADEAADVGARLLLLHPQQLPTAKFYIGLDP  296 (302)
Q Consensus       260 ------~---------~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  296 (302)
                            .         ......++++|..++.++..+ .    |..|...++
T Consensus       202 ~~~~~~~~~~~~~~~~~~~~i~v~Dva~ai~~~~~~~-~----g~~~~v~~~  248 (333)
T 2q1w_A          202 FFQRLSEGKKCFVTKARRDFVFVKDLARATVRAVDGV-G----HGAYHFSSG  248 (333)
T ss_dssp             HHHHHHTTCCCEEEECEECEEEHHHHHHHHHHHHTTC-C----CEEEECSCS
T ss_pred             HHHHHHcCCeeeCCCceEeeEEHHHHHHHHHHHHhcC-C----CCEEEeCCC
Confidence                  0         012256899999999998632 2    666666554

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=99.81  E-value=1.1e-19  Score=168.93  Aligned_cols=211  Identities=14%  Similarity=0.089  Sum_probs=148.7

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcC-CEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELG-LTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G-~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      .+++++|+||||+|+||++++++|+++| ++|++++|+.....  ...+.    .+. +.+|+++.+.++++++.  ..+
T Consensus        43 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~~----~~~-~~~d~~~~~~~~~~~~~--~~~  113 (357)
T 2x6t_A           43 GIEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNLV----DLN-IADYMDKEDFLIQIMAG--EEF  113 (357)
T ss_dssp             -----CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG--GGGTT----TSC-CSEEEEHHHHHHHHHTT--CCC
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch--hhccc----Cce-EeeecCcHHHHHHHHhh--ccc
Confidence            4677899999999999999999999999 99999999865421  11111    223 67899999988877763  235


Q ss_pred             CCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccch
Q 022103          106 AALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILED  185 (302)
Q Consensus       106 g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~  185 (302)
                      +.+|+|||+||....     +.+++++.+++|+.++.++++++.+.     +. +||++||..........+    ..++
T Consensus       114 ~~~d~Vih~A~~~~~-----~~~~~~~~~~~n~~~~~~ll~a~~~~-----~~-r~V~~SS~~v~g~~~~~~----~~E~  178 (357)
T 2x6t_A          114 GDVEAIFHEGACSST-----TEWDGKYMMDNNYQYSKELLHYCLER-----EI-PFLYASSAATYGGRTSDF----IESR  178 (357)
T ss_dssp             SSCCEEEECCSCCCT-----TCCCHHHHHHHTHHHHHHHHHHHHHH-----TC-CEEEEEEGGGGCSCSSCC----CSSG
T ss_pred             CCCCEEEECCcccCC-----ccCCHHHHHHHHHHHHHHHHHHHHHc-----CC-eEEEEcchHHhCCCCCCC----cCCc
Confidence            689999999997542     33457889999999999999999773     34 999999987643221110    0000


Q ss_pred             hhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCC----
Q 022103          186 EELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG----  261 (302)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~----  261 (302)
                                                 ..+.+...|+.+|.+.+.+++.++.+   .|++++.|.|+.+.++....    
T Consensus       179 ---------------------------~~~~p~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~Gp~~~~~~~~  228 (357)
T 2x6t_A          179 ---------------------------EYEKPLNVFGYSKFLFDEYVRQILPE---ANSQIVGFRYFNVYGPREGHKGSM  228 (357)
T ss_dssp             ---------------------------GGCCCSSHHHHHHHHHHHHHHHHGGG---CSSCEEEEEECEEESSSCTTCGGG
T ss_pred             ---------------------------CCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEecCeEECCCCCCCccc
Confidence                                       01122468999999999999999877   58999999999998765320    


Q ss_pred             -------------------C--------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCc
Q 022103          262 -------------------Q--------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDP  296 (302)
Q Consensus       262 -------------------~--------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  296 (302)
                                         .        .....+++|..++.++..+.     |..|...++
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~-----~~~~~i~~~  285 (357)
T 2x6t_A          229 ASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV-----SGIFNLGTG  285 (357)
T ss_dssp             SCHHHHHHHHHHTTCCCEEETTGGGCEECEEEHHHHHHHHHHHHHHCC-----CEEEEESCS
T ss_pred             chHHHHHHHHHHcCCCcEEeCCCCcceEccEEHHHHHHHHHHHHhcCC-----CCeEEecCC
Confidence                               0        11357899999999887432     455555443

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.81  E-value=9.9e-19  Score=150.88  Aligned_cols=201  Identities=10%  Similarity=0.061  Sum_probs=133.6

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCccEE
Q 022103           32 IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDIL  111 (302)
Q Consensus        32 ~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id~l  111 (302)
                      +++||||+|+||++++++|+++|++|++++|+.++++...       ..+.++.+|++|.++  +.       +..+|+|
T Consensus         2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-------~~~~~~~~D~~d~~~--~~-------~~~~d~v   65 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH-------KDINILQKDIFDLTL--SD-------LSDQNVV   65 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC-------SSSEEEECCGGGCCH--HH-------HTTCSEE
T ss_pred             eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc-------CCCeEEeccccChhh--hh-------hcCCCEE
Confidence            5899999999999999999999999999999987755432       368899999999887  22       2478999


Q ss_pred             EEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhhcHH
Q 022103          112 VNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEE  191 (302)
Q Consensus       112 v~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~  191 (302)
                      ||+||.....            ..+|+.++.+++++    +++. +.+++|++||..+..+.+....          .. 
T Consensus        66 i~~ag~~~~~------------~~~~~~~~~~l~~a----~~~~-~~~~~v~~SS~~~~~~~~~~~~----------~~-  117 (221)
T 3ew7_A           66 VDAYGISPDE------------AEKHVTSLDHLISV----LNGT-VSPRLLVVGGAASLQIDEDGNT----------LL-  117 (221)
T ss_dssp             EECCCSSTTT------------TTSHHHHHHHHHHH----HCSC-CSSEEEEECCCC-----------------------
T ss_pred             EECCcCCccc------------cchHHHHHHHHHHH----HHhc-CCceEEEEecceEEEcCCCCcc----------cc-
Confidence            9999984321            34466665555554    4444 5789999999887655432100          00 


Q ss_pred             HHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCC----------
Q 022103          192 QIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG----------  261 (302)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~----------  261 (302)
                                         ....+.+...|+.+|.+.+.+. .+..  ...|++++.|+||.+.++....          
T Consensus       118 -------------------~~~~~~~~~~y~~~k~~~e~~~-~~~~--~~~gi~~~ivrp~~v~g~~~~~~~~~~~~~~~  175 (221)
T 3ew7_A          118 -------------------ESKGLREAPYYPTARAQAKQLE-HLKS--HQAEFSWTYISPSAMFEPGERTGDYQIGKDHL  175 (221)
T ss_dssp             --------------------------CCCSCCHHHHHHHHH-HHHT--TTTTSCEEEEECSSCCCCC-------------
T ss_pred             -------------------ccCCCCCHHHHHHHHHHHHHHH-HHHh--hccCccEEEEeCcceecCCCccCceEeccccc
Confidence                               0000112356999999999873 3332  1478999999999998762110          


Q ss_pred             ------CCCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcccCCC
Q 022103          262 ------QGSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVKSN  301 (302)
Q Consensus       262 ------~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~~  301 (302)
                            ....+++++|..++.++..+.   ..|+.|...++..+++
T Consensus       176 ~~~~~~~~~i~~~Dva~~~~~~l~~~~---~~g~~~~~~~~~~~~~  218 (221)
T 3ew7_A          176 LFGSDGNSFISMEDYAIAVLDEIERPN---HLNEHFTVAGKLEHHH  218 (221)
T ss_dssp             --------CCCHHHHHHHHHHHHHSCS---CTTSEEECCC------
T ss_pred             eecCCCCceEeHHHHHHHHHHHHhCcc---ccCCEEEECCCCcccc
Confidence                  014778999999999997433   4688998888876643

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=99.81  E-value=1.3e-18  Score=158.65  Aligned_cols=198  Identities=16%  Similarity=0.105  Sum_probs=146.4

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCccE
Q 022103           31 TIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDI  110 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id~  110 (302)
                      ++++||||+|+||++++++|+++|++|++++|+....+  .+       .+.++.+|++ .+++.++++       .+|+
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~~-------~~~~~~~Dl~-~~~~~~~~~-------~~d~   65 (311)
T 3m2p_A            3 LKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA--IN-------DYEYRVSDYT-LEDLINQLN-------DVDA   65 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC--------------CCEEEECCCC-HHHHHHHTT-------TCSE
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc--CC-------ceEEEEcccc-HHHHHHhhc-------CCCE
Confidence            68999999999999999999999999999999943322  11       6789999999 888877765       7899


Q ss_pred             EEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhhcH
Q 022103          111 LVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSE  190 (302)
Q Consensus       111 lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~  190 (302)
                      |||+||.....       +++..+++|+.++.++++++...     +.++||++||...+......              
T Consensus        66 Vih~a~~~~~~-------~~~~~~~~n~~~~~~ll~a~~~~-----~~~r~v~~SS~~vyg~~~~~--------------  119 (311)
T 3m2p_A           66 VVHLAATRGSQ-------GKISEFHDNEILTQNLYDACYEN-----NISNIVYASTISAYSDETSL--------------  119 (311)
T ss_dssp             EEECCCCCCSS-------SCGGGTHHHHHHHHHHHHHHHHT-----TCCEEEEEEEGGGCCCGGGC--------------
T ss_pred             EEEccccCCCC-------ChHHHHHHHHHHHHHHHHHHHHc-----CCCEEEEEccHHHhCCCCCC--------------
Confidence            99999986432       45567899999999999988543     45789999996554222111              


Q ss_pred             HHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC--------
Q 022103          191 EQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ--------  262 (302)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~--------  262 (302)
                                       .+.+...+.+...|+.+|.+.|.+++.++.+   .|++++.+.|+.+..+.....        
T Consensus       120 -----------------~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~~~~~~~~~~~~~  179 (311)
T 3m2p_A          120 -----------------PWNEKELPLPDLMYGVSKLACEHIGNIYSRK---KGLCIKNLRFAHLYGFNEKNNYMINRFFR  179 (311)
T ss_dssp             -----------------SBCTTSCCCCSSHHHHHHHHHHHHHHHHHHH---SCCEEEEEEECEEECSCC--CCHHHHHHH
T ss_pred             -----------------CCCCCCCCCCCchhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCceeCcCCCCCCHHHHHHH
Confidence                             1111112333478999999999999999986   689999999999987764421        


Q ss_pred             ------------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCC
Q 022103          263 ------------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLD  295 (302)
Q Consensus       263 ------------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~  295 (302)
                                        ..+..+++|..++.++..+ .   .|..|...+
T Consensus       180 ~~~~~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~~-~---~~~~~~i~~  226 (311)
T 3m2p_A          180 QAFHGEQLTLHANSVAKREFLYAKDAAKSVIYALKQE-K---VSGTFNIGS  226 (311)
T ss_dssp             HHHTCCCEEESSBCCCCEEEEEHHHHHHHHHHHTTCT-T---CCEEEEECC
T ss_pred             HHHcCCCeEEecCCCeEEceEEHHHHHHHHHHHHhcC-C---CCCeEEeCC
Confidence                              0155789999999988632 2   355554443

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.81  E-value=1e-18  Score=151.41  Aligned_cols=199  Identities=17%  Similarity=0.066  Sum_probs=138.6

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCccEE
Q 022103           32 IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDIL  111 (302)
Q Consensus        32 ~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id~l  111 (302)
                      +++||||+|+||++++++|+++|++|++++|+.++.+..    .  ...+.++.+|++|.++  +       .+..+|+|
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~----~--~~~~~~~~~D~~d~~~--~-------~~~~~d~v   66 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADR----L--GATVATLVKEPLVLTE--A-------DLDSVDAV   66 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH----T--CTTSEEEECCGGGCCH--H-------HHTTCSEE
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccc----c--CCCceEEecccccccH--h-------hcccCCEE
Confidence            499999999999999999999999999999998765532    1  2468899999999887  2       22478999


Q ss_pred             EEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhhcHH
Q 022103          112 VNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEE  191 (302)
Q Consensus       112 v~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~  191 (302)
                      ||+||..+...          ...+|+.++.+++++    +++. + ++||++||..+..+......  ...+       
T Consensus        67 i~~ag~~~~~~----------~~~~n~~~~~~l~~a----~~~~-~-~~~v~~SS~~~~~~~~~~~~--~~~~-------  121 (224)
T 3h2s_A           67 VDALSVPWGSG----------RGYLHLDFATHLVSL----LRNS-D-TLAVFILGSASLAMPGADHP--MILD-------  121 (224)
T ss_dssp             EECCCCCTTSS----------CTHHHHHHHHHHHHT----CTTC-C-CEEEEECCGGGSBCTTCSSC--GGGG-------
T ss_pred             EECCccCCCcc----------hhhHHHHHHHHHHHH----HHHc-C-CcEEEEecceeeccCCCCcc--cccc-------
Confidence            99999863321          134577776555544    4455 4 89999999876654332100  0000       


Q ss_pred             HHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCC----------
Q 022103          192 QIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG----------  261 (302)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~----------  261 (302)
                                         ....|.+...|+.+|.+.+.+ ..+.   ...|++++.|+||.+.++....          
T Consensus       122 -------------------~~~~~~~~~~y~~sK~~~e~~-~~~~---~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~  178 (224)
T 3h2s_A          122 -------------------FPESAASQPWYDGALYQYYEY-QFLQ---MNANVNWIGISPSEAFPSGPATSYVAGKDTLL  178 (224)
T ss_dssp             -------------------CCGGGGGSTTHHHHHHHHHHH-HHHT---TCTTSCEEEEEECSBCCCCCCCCEEEESSBCC
T ss_pred             -------------------CCCCCccchhhHHHHHHHHHH-HHHH---hcCCCcEEEEcCccccCCCcccCceecccccc
Confidence                               011122246799999999954 2222   3479999999999999763211          


Q ss_pred             -----CCCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCc
Q 022103          262 -----QGSHTADEAADVGARLLLLHPQQLPTAKFYIGLDP  296 (302)
Q Consensus       262 -----~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  296 (302)
                           .....++++|..++.++..+.   ..|+.|...+.
T Consensus       179 ~~~~~~~~i~~~DvA~~~~~~l~~~~---~~g~~~~~~~~  215 (224)
T 3h2s_A          179 VGEDGQSHITTGNMALAILDQLEHPT---AIRDRIVVRDA  215 (224)
T ss_dssp             CCTTSCCBCCHHHHHHHHHHHHHSCC---CTTSEEEEEEC
T ss_pred             cCCCCCceEeHHHHHHHHHHHhcCcc---ccCCEEEEecC
Confidence                 123789999999999997432   34777766554

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=99.80  E-value=1.2e-18  Score=159.67  Aligned_cols=175  Identities=15%  Similarity=0.150  Sum_probs=133.4

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCccE
Q 022103           31 TIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDI  110 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id~  110 (302)
                      ++++||||+|+||++++++|+++|++|++++|+.....   +.+   ..++.++.+|++|.+++.+++++     ..+|+
T Consensus         2 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~~---~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   70 (330)
T 2c20_A            2 NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHE---DAI---TEGAKFYNGDLRDKAFLRDVFTQ-----ENIEA   70 (330)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCG---GGS---CTTSEEEECCTTCHHHHHHHHHH-----SCEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCch---hhc---CCCcEEEECCCCCHHHHHHHHhh-----cCCCE
Confidence            57999999999999999999999999999999764322   111   12678899999999999888775     37999


Q ss_pred             EEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhhcH
Q 022103          111 LVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSE  190 (302)
Q Consensus       111 lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~  190 (302)
                      |||+||.....   .+.++++..+++|+.++.++++++..    . +.++||++||..........+             
T Consensus        71 vih~a~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~~~----~-~~~~~v~~Ss~~~~~~~~~~~-------------  129 (330)
T 2c20_A           71 VMHFAADSLVG---VSMEKPLQYYNNNVYGALCLLEVMDE----F-KVDKFIFSSTAATYGEVDVDL-------------  129 (330)
T ss_dssp             EEECCCCCCHH---HHHHSHHHHHHHHHHHHHHHHHHHHH----T-TCCEEEEECCGGGGCSCSSSS-------------
T ss_pred             EEECCcccCcc---ccccCHHHHHHHHhHHHHHHHHHHHH----c-CCCEEEEeCCceeeCCCCCCC-------------
Confidence            99999975321   24567788999999999999998754    2 457999999976542211100             


Q ss_pred             HHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCC
Q 022103          191 EQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSM  258 (302)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~  258 (302)
                                        ..+...+.+...|+.+|.+.+.+++.++.+   .|++++.|.|+.+..+.
T Consensus       130 ------------------~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~v~G~~  176 (330)
T 2c20_A          130 ------------------ITEETMTNPTNTYGETKLAIEKMLHWYSQA---SNLRYKIFRYFNVAGAT  176 (330)
T ss_dssp             ------------------BCTTSCCCCSSHHHHHHHHHHHHHHHHHHT---SSCEEEEEECSEEECCC
T ss_pred             ------------------CCcCCCCCCCChHHHHHHHHHHHHHHHHHH---hCCcEEEEecCcccCCC
Confidence                              001111233578999999999999999987   48999999999887663

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.80  E-value=1e-18  Score=160.84  Aligned_cols=177  Identities=18%  Similarity=0.159  Sum_probs=127.1

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhh-CCCceeEEEeeCCCHHHHHHHHHHHHhhCCCccE
Q 022103           32 IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSE-KGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDI  110 (302)
Q Consensus        32 ~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id~  110 (302)
                      +++||||+|+||++++++|+++|++|++++|.........+.+.+ .+.++.++.+|++|.+++.++++..     .+|+
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~D~   76 (338)
T 1udb_A            2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDH-----AIDT   76 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHT-----TCSE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhcc-----CCCE
Confidence            589999999999999999999999999998743221111222221 1346788999999999998888752     6999


Q ss_pred             EEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhhcH
Q 022103          111 LVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSE  190 (302)
Q Consensus       111 lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~  190 (302)
                      |||+||.....   ...+++++.+++|+.++.++++++...     +.++||++||...+......+             
T Consensus        77 vih~A~~~~~~---~~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~~~iv~~SS~~~~g~~~~~~-------------  135 (338)
T 1udb_A           77 VIHFAGLKAVG---ESVQKPLEYYDNNVNGTLRLISAMRAA-----NVKNFIFSSSATVYGDNPKIP-------------  135 (338)
T ss_dssp             EEECCSCCCHH---HHHHCHHHHHHHHHHHHHHHHHHHHHH-----TCCEEEEEEEGGGGCSCCSSS-------------
T ss_pred             EEECCccCccc---cchhcHHHHHHHHHHHHHHHHHHHHhc-----CCCeEEEEccHHHhCCCCCCC-------------
Confidence            99999975321   133456788999999999999876432     357999999976542111000             


Q ss_pred             HHHHHHHHHHHhhhccCCCCCCCCC--cccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCccc
Q 022103          191 EQIERFVGLFLQSVKDGTWKSQGWP--EIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQ  255 (302)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~  255 (302)
                                         .+...|  +....|+.||++++.+++.++.++  .|+++..+.|+.+.
T Consensus       136 -------------------~~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~  181 (338)
T 1udb_A          136 -------------------YVESFPTGTPQSPYGKSKLMVEQILTDLQKAQ--PDWSIALLRYFNPV  181 (338)
T ss_dssp             -------------------BCTTSCCCCCSSHHHHHHHHHHHHHHHHHHHS--TTCEEEEEEECEEE
T ss_pred             -------------------cCcccCCCCCCChHHHHHHHHHHHHHHHHHhc--CCCceEEEeeceec
Confidence                               001111  125789999999999999999874  37899888876554

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=99.80  E-value=8.8e-19  Score=159.13  Aligned_cols=211  Identities=16%  Similarity=0.028  Sum_probs=151.5

Q ss_pred             CcEEEEeCCCchHHHHHHHHHHHc--CCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           30 ETIAIVTGANKGIGFALVKRLAEL--GLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        30 ~k~vlItGas~gIG~ala~~l~~~--G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      +++++||||+|+||.+++++|+++  |++|++++|+..+..     +..   ++.++.+|++|.+++.+++++.     .
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-----~~~---~~~~~~~D~~d~~~~~~~~~~~-----~   68 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD-----VVN---SGPFEVVNALDFNQIEHLVEVH-----K   68 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH-----HHH---SSCEEECCTTCHHHHHHHHHHT-----T
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc-----ccC---CCceEEecCCCHHHHHHHHhhc-----C
Confidence            367999999999999999999999  899999999875521     111   4678999999999998888754     6


Q ss_pred             ccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhh
Q 022103          108 LDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEE  187 (302)
Q Consensus       108 id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~  187 (302)
                      +|+|||+||....    ...++++..+++|+.++.++++++.+.     +.++||++||............         
T Consensus        69 ~d~vih~a~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~~~~v~~SS~~~~~~~~~~~~---------  130 (312)
T 2yy7_A           69 ITDIYLMAALLSA----TAEKNPAFAWDLNMNSLFHVLNLAKAK-----KIKKIFWPSSIAVFGPTTPKEN---------  130 (312)
T ss_dssp             CCEEEECCCCCHH----HHHHCHHHHHHHHHHHHHHHHHHHHTT-----SCSEEECCEEGGGCCTTSCSSS---------
T ss_pred             CCEEEECCccCCC----chhhChHHHHHHHHHHHHHHHHHHHHc-----CCCEEEEeccHHHhCCCCCCCC---------
Confidence            8999999997532    123567889999999999999988652     4579999999776533211000         


Q ss_pred             hcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC-----
Q 022103          188 LSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ-----  262 (302)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~-----  262 (302)
                                           ..+...+.+...|+.+|.+.+.+++.++.+   .|++++.+.|+.+..+.....     
T Consensus       131 ---------------------~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~~v~g~~~~~~~~~~~  186 (312)
T 2yy7_A          131 ---------------------TPQYTIMEPSTVYGISKQAGERWCEYYHNI---YGVDVRSIRYPGLISWSTPPGGGTTD  186 (312)
T ss_dssp             ---------------------BCSSCBCCCCSHHHHHHHHHHHHHHHHHHH---HCCEEECEEECEEECSSSCCCSCTTT
T ss_pred             ---------------------ccccCcCCCCchhHHHHHHHHHHHHHHHHh---cCCcEEEEeCCeEecCCCCCCCchhh
Confidence                                 000111223478999999999999999887   389999999999887432100     


Q ss_pred             ------------------C-------CCCHHHHHHHHHHHhhcCCCCCCCcceeecCC
Q 022103          263 ------------------G-------SHTADEAADVGARLLLLHPQQLPTAKFYIGLD  295 (302)
Q Consensus       263 ------------------~-------~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~  295 (302)
                                        +       ....+++|..++.++..+......|..|...+
T Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~ni~~  244 (312)
T 2yy7_A          187 YAVDIFYKAIADKKYECFLSSETKMPMMYMDDAIDATINIMKAPVEKIKIHSSYNLAA  244 (312)
T ss_dssp             HHHHHHHHHHHTSEEEESSCTTCCEEEEEHHHHHHHHHHHHHSCGGGCCCSSCEECCS
T ss_pred             hHHHHHHHHHcCCCeEEecCCCceeeeeeHHHHHHHHHHHHhCcccccccCceEEeCC
Confidence                              0       14468999999988863322111234555444

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=99.80  E-value=8.1e-19  Score=161.40  Aligned_cols=217  Identities=14%  Similarity=0.044  Sum_probs=151.8

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHc-CCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCH-HHHHHHHHHHHhhCCCc
Q 022103           31 TIAIVTGANKGIGFALVKRLAEL-GLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP-SSIEAFVSWFKSNFAAL  108 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~-G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~-~~~~~~~~~~~~~~g~i  108 (302)
                      ++++||||+|+||++++++|+++ |++|++++|+.++.+..    . ....+.++.+|++|. +.++++++       .+
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~----~-~~~~~~~~~~D~~~~~~~~~~~~~-------~~   68 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRF----L-NHPHFHFVEGDISIHSEWIEYHVK-------KC   68 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGG----T-TCTTEEEEECCTTTCSHHHHHHHH-------HC
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHh----h-cCCCeEEEeccccCcHHHHHhhcc-------CC
Confidence            36999999999999999999998 89999999987654321    1 124688999999984 56766665       47


Q ss_pred             cEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhh
Q 022103          109 DILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEEL  188 (302)
Q Consensus       109 d~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  188 (302)
                      |+|||+||...+.   ...++++..+++|+.++.++++++..    . + ++||++||..........+     .+++..
T Consensus        69 d~vih~A~~~~~~---~~~~~~~~~~~~n~~~~~~l~~~~~~----~-~-~~~v~~SS~~v~g~~~~~~-----~~e~~~  134 (345)
T 2bll_A           69 DVVLPLVAIATPI---EYTRNPLRVFELDFEENLRIIRYCVK----Y-R-KRIIFPSTSEVYGMCSDKY-----FDEDHS  134 (345)
T ss_dssp             SEEEECBCCCCHH---HHHHSHHHHHHHHTHHHHHHHHHHHH----T-T-CEEEEECCGGGGBTCCCSS-----BCTTTC
T ss_pred             CEEEEcccccCcc---chhcCHHHHHHHHHHHHHHHHHHHHH----h-C-CeEEEEecHHHcCCCCCCC-----cCCccc
Confidence            9999999975421   12346778999999999999988854    2 3 7999999976542221110     000000


Q ss_pred             cHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC------
Q 022103          189 SEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ------  262 (302)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~------  262 (302)
                                         .....+.......|+.+|.+.+.+++.++.+   .|++++.|.||.+.++.....      
T Consensus       135 -------------------~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~v~G~~~~~~~~~~~~  192 (345)
T 2bll_A          135 -------------------NLIVGPVNKPRWIYSVSKQLLDRVIWAYGEK---EGLQFTLFRPFNWMGPRLDNLNAARIG  192 (345)
T ss_dssp             -------------------CCBCCCTTCGGGHHHHHHHHHHHHHHHHHHH---HCCCEEEEEECSEECSSCCCTTCSBSC
T ss_pred             -------------------ccccCcccCcccccHHHHHHHHHHHHHHHHh---cCCCEEEEcCCcccCCCcccccccccc
Confidence                               0000000122357999999999999999987   489999999999987753210      


Q ss_pred             ----------------------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCc
Q 022103          263 ----------------------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDP  296 (302)
Q Consensus       263 ----------------------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  296 (302)
                                                  ..+..+++|..++.++.. +.....|.+|...++
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~-~~~~~~g~~~~i~~~  253 (345)
T 2bll_A          193 SSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIEN-AGNRCDGEIINIGNP  253 (345)
T ss_dssp             BCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHHHHHHHC-GGGTTTTEEEEECCT
T ss_pred             cccHHHHHHHHHHcCCCcEEECCCCEEEEEEEHHHHHHHHHHHHhh-ccccCCCceEEeCCC
Confidence                                        124678999999998863 332245776766654

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.79  E-value=2.7e-20  Score=160.29  Aligned_cols=172  Identities=15%  Similarity=0.030  Sum_probs=135.1

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcCC--EEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELGL--TVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G~--~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      .+++++||||+|+||++++++|+++|+  +|++++|+.++          ...++.++.+|++|.+++.+++        
T Consensus         4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~----------~~~~~~~~~~D~~~~~~~~~~~--------   65 (215)
T 2a35_A            4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA----------EHPRLDNPVGPLAELLPQLDGS--------   65 (215)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC----------CCTTEECCBSCHHHHGGGCCSC--------
T ss_pred             CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc----------cCCCceEEeccccCHHHHHHhh--------
Confidence            357899999999999999999999998  99999998764          1236788889999887665433        


Q ss_pred             CccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchh
Q 022103          107 ALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDE  186 (302)
Q Consensus       107 ~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~  186 (302)
                       +|+|||+||....     +.+.+++.+++|+.++.++++++.+.     +.++||++||......              
T Consensus        66 -~d~vi~~a~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~~~~v~~Ss~~~~~~--------------  120 (215)
T 2a35_A           66 -IDTAFCCLGTTIK-----EAGSEEAFRAVDFDLPLAVGKRALEM-----GARHYLVVSALGADAK--------------  120 (215)
T ss_dssp             -CSEEEECCCCCHH-----HHSSHHHHHHHHTHHHHHHHHHHHHT-----TCCEEEEECCTTCCTT--------------
T ss_pred             -hcEEEECeeeccc-----cCCCHHHHHHhhHHHHHHHHHHHHHc-----CCCEEEEECCcccCCC--------------
Confidence             8999999997532     24567888999999999999987653     4578999999776421              


Q ss_pred             hhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcE-EEEeecCcccCCCCCC----
Q 022103          187 ELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGIS-VNSYCPGFTQTSMTQG----  261 (302)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~-V~~v~PG~v~T~~~~~----  261 (302)
                                                    ....|+.+|.+++.+++.       .|++ ++.|+||.+.++....    
T Consensus       121 ------------------------------~~~~y~~sK~~~e~~~~~-------~~~~~~~~vrp~~v~g~~~~~~~~~  163 (215)
T 2a35_A          121 ------------------------------SSIFYNRVKGELEQALQE-------QGWPQLTIARPSLLFGPREEFRLAE  163 (215)
T ss_dssp             ------------------------------CSSHHHHHHHHHHHHHTT-------SCCSEEEEEECCSEESTTSCEEGGG
T ss_pred             ------------------------------CccHHHHHHHHHHHHHHH-------cCCCeEEEEeCceeeCCCCcchHHH
Confidence                                          125799999999998764       3798 9999999998875321    


Q ss_pred             -C------------CCCCHHHHHHHHHHHhhc
Q 022103          262 -Q------------GSHTADEAADVGARLLLL  280 (302)
Q Consensus       262 -~------------~~~~~~~~a~~~~~l~~~  280 (302)
                       .            ....++++|..++.++..
T Consensus       164 ~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~  195 (215)
T 2a35_A          164 ILAAPIARILPGKYHGIEACDLARALWRLALE  195 (215)
T ss_dssp             GTTCCCC----CHHHHHHHHHHHHHHHHHHTC
T ss_pred             HHHHhhhhccCCCcCcEeHHHHHHHHHHHHhc
Confidence             0            014568999999999874

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.79  E-value=7.7e-19  Score=160.07  Aligned_cols=204  Identities=15%  Similarity=0.115  Sum_probs=118.6

Q ss_pred             CcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCcc
Q 022103           30 ETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALD  109 (302)
Q Consensus        30 ~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id  109 (302)
                      +++++||||+|+||++++++|+++|++|++++|+.++           . .  ++.+|++|.+++.++++..     ++|
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-----------~-~--~~~~Dl~d~~~~~~~~~~~-----~~d   62 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR-----------P-K--FEQVNLLDSNAVHHIIHDF-----QPH   62 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC--------------------------------CHHHHHHH-----CCS
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC-----------C-C--eEEecCCCHHHHHHHHHhh-----CCC
Confidence            5789999999999999999999999999999987543           1 1  6789999999999888865     689


Q ss_pred             EEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhhc
Q 022103          110 ILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELS  189 (302)
Q Consensus       110 ~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~  189 (302)
                      +|||+||.....   .+.++++..+++|+.++.++++++.+.     + ++||++||.....+ ...+            
T Consensus        63 ~vih~A~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~~~~-----~-~~~v~~SS~~v~~~-~~~~------------  120 (315)
T 2ydy_A           63 VIVHCAAERRPD---VVENQPDAASQLNVDASGNLAKEAAAV-----G-AFLIYISSDYVFDG-TNPP------------  120 (315)
T ss_dssp             EEEECC----------------------CHHHHHHHHHHHHH-----T-CEEEEEEEGGGSCS-SSCS------------
T ss_pred             EEEECCcccChh---hhhcCHHHHHHHHHHHHHHHHHHHHHc-----C-CeEEEEchHHHcCC-CCCC------------
Confidence            999999975432   355778899999999999999999763     2 49999999876533 1110            


Q ss_pred             HHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccC---CCC-------
Q 022103          190 EEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQT---SMT-------  259 (302)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T---~~~-------  259 (302)
                                         ..+...+.+...|+.+|++.+.+++.++.++  ..||+..|. |...+   ++.       
T Consensus       121 -------------------~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~lR~~~v~-G~~~~~~~~~~~~~~~~~  178 (315)
T 2ydy_A          121 -------------------YREEDIPAPLNLYGKTKLDGEKAVLENNLGA--AVLRIPILY-GEVEKLEESAVTVMFDKV  178 (315)
T ss_dssp             -------------------BCTTSCCCCCSHHHHHHHHHHHHHHHHCTTC--EEEEECSEE-CSCSSGGGSTTGGGHHHH
T ss_pred             -------------------CCCCCCCCCcCHHHHHHHHHHHHHHHhCCCe--EEEeeeeee-CCCCcccccHHHHHHHHH
Confidence                               0111112334789999999999999986543  345666655 44333   211       


Q ss_pred             --CC----------CCCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCc
Q 022103          260 --QG----------QGSHTADEAADVGARLLLLHPQQLPTAKFYIGLDP  296 (302)
Q Consensus       260 --~~----------~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  296 (302)
                        ..          .....++++|..++.++..+......|..|...++
T Consensus       179 ~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~i~~~  227 (315)
T 2ydy_A          179 QFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRMLDPSIKGTFHWSGN  227 (315)
T ss_dssp             HCCSSCEEEECSSBBCCEEHHHHHHHHHHHHHHHHTCTTCCEEEECCCS
T ss_pred             HhcCCCeeeccCceECcEEHHHHHHHHHHHHHhhccccCCCCeEEEcCC
Confidence              11          12256899999999988632111134556655554

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=99.79  E-value=1.5e-18  Score=160.35  Aligned_cols=215  Identities=15%  Similarity=0.084  Sum_probs=145.5

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      ..+++++|+||||+|+||++++++|+++|++|++++|+..........+. ...++.++.+|+++..            +
T Consensus        23 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~------------~   89 (343)
T 2b69_A           23 MEKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWI-GHENFELINHDVVEPL------------Y   89 (343)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGT-TCTTEEEEECCTTSCC------------C
T ss_pred             cccCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhhc-cCCceEEEeCccCChh------------h
Confidence            44778999999999999999999999999999999997532211111111 1246889999998753            3


Q ss_pred             CCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccch
Q 022103          106 AALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILED  185 (302)
Q Consensus       106 g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~  185 (302)
                      ..+|+|||+||......   ..++++..+++|+.++.++++++...     + .+||++||...+......+     .++
T Consensus        90 ~~~d~vih~A~~~~~~~---~~~~~~~~~~~n~~~~~~l~~a~~~~-----~-~~~v~~SS~~v~g~~~~~~-----~~E  155 (343)
T 2b69_A           90 IEVDQIYHLASPASPPN---YMYNPIKTLKTNTIGTLNMLGLAKRV-----G-ARLLLASTSEVYGDPEVHP-----QSE  155 (343)
T ss_dssp             CCCSEEEECCSCCSHHH---HTTCHHHHHHHHHHHHHHHHHHHHHH-----T-CEEEEEEEGGGGBSCSSSS-----BCT
T ss_pred             cCCCEEEECccccCchh---hhhCHHHHHHHHHHHHHHHHHHHHHh-----C-CcEEEECcHHHhCCCCCCC-----Ccc
Confidence            57999999999754221   12345678999999999999988653     2 4899999975542211110     000


Q ss_pred             hhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC---
Q 022103          186 EELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ---  262 (302)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~---  262 (302)
                      +                     .|.....+.+...|+.+|++.+.+++.++.+   .|++++.+.||.+.++.....   
T Consensus       156 ~---------------------~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilrp~~v~G~~~~~~~~~  211 (343)
T 2b69_A          156 D---------------------YWGHVNPIGPRACYDEGKRVAETMCYAYMKQ---EGVEVRVARIFNTFGPRMHMNDGR  211 (343)
T ss_dssp             T---------------------CCCBCCSSSTTHHHHHHHHHHHHHHHHHHHH---HCCCEEEEEECCEECTTCCTTCCC
T ss_pred             c---------------------ccccCCCCCCCCchHHHHHHHHHHHHHHHHH---hCCcEEEEEEcceeCcCCCCCccc
Confidence            0                     1111112233467999999999999999887   489999999999988753210   


Q ss_pred             -------------------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCC
Q 022103          263 -------------------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLD  295 (302)
Q Consensus       263 -------------------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~  295 (302)
                                               .....+++|..++.++.. +   ..+.+.+..+
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~-~---~~~~~~i~~~  265 (343)
T 2b69_A          212 VVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNS-N---VSSPVNLGNP  265 (343)
T ss_dssp             HHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHHTS-S---CCSCEEESCC
T ss_pred             HHHHHHHHHHcCCCceEcCCCCeEEeeEeHHHHHHHHHHHHhc-C---CCCeEEecCC
Confidence                                     014679999999888763 2   1345555443

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.79  E-value=1.8e-18  Score=157.54  Aligned_cols=207  Identities=18%  Similarity=0.120  Sum_probs=147.9

Q ss_pred             EEEEeCCCchHHHHHHHHHHHc--CCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCcc
Q 022103           32 IAIVTGANKGIGFALVKRLAEL--GLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALD  109 (302)
Q Consensus        32 ~vlItGas~gIG~ala~~l~~~--G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id  109 (302)
                      +++||||+|+||++++++|+++  |++|++++|+..+.+           .+.++.+|++|.+++.+++++.     .+|
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-----------~~~~~~~D~~d~~~~~~~~~~~-----~~d   64 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG-----------GIKFITLDVSNRDEIDRAVEKY-----SID   64 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT-----------TCCEEECCTTCHHHHHHHHHHT-----TCC
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc-----------CceEEEecCCCHHHHHHHHhhc-----CCc
Confidence            3899999999999999999999  899999998764321           3578899999999998888752     699


Q ss_pred             EEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhhc
Q 022103          110 ILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELS  189 (302)
Q Consensus       110 ~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~  189 (302)
                      +|||+||....    ...++++..+++|+.++.++++++...     +.++||++||............           
T Consensus        65 ~vih~a~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~~~~-----~~~~~v~~SS~~~~~~~~~~~~-----------  124 (317)
T 3ajr_A           65 AIFHLAGILSA----KGEKDPALAYKVNMNGTYNILEAAKQH-----RVEKVVIPSTIGVFGPETPKNK-----------  124 (317)
T ss_dssp             EEEECCCCCHH----HHHHCHHHHHHHHHHHHHHHHHHHHHT-----TCCEEEEEEEGGGCCTTSCSSS-----------
T ss_pred             EEEECCcccCC----ccccChHHHhhhhhHHHHHHHHHHHHc-----CCCEEEEecCHHHhCCCCCCCC-----------
Confidence            99999997532    134567889999999999999988652     4579999999876543211000           


Q ss_pred             HHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCC-C-----C--
Q 022103          190 EEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMT-Q-----G--  261 (302)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~-~-----~--  261 (302)
                                         ..+...+.+...|+.+|.+.+.+++.++.+   .|++++.|.|+.+..+.. .     +  
T Consensus       125 -------------------~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~~~g~~~~~~~~~~~~~  182 (317)
T 3ajr_A          125 -------------------VPSITITRPRTMFGVTKIAAELLGQYYYEK---FGLDVRSLRYPGIISYKAEPTAGTTDYA  182 (317)
T ss_dssp             -------------------BCSSSCCCCCSHHHHHHHHHHHHHHHHHHH---HCCEEEEEEECEEECSSSCCCSCSSTHH
T ss_pred             -------------------ccccccCCCCchHHHHHHHHHHHHHHHHHh---cCCeEEEEecCcEeccCCCCCCcchhHH
Confidence                               000111223578999999999999999876   489999998665543210 0     0  


Q ss_pred             ---------CC-------------CCCHHHHHHHHHHHhhcCCCCCCCcceeecCCc
Q 022103          262 ---------QG-------------SHTADEAADVGARLLLLHPQQLPTAKFYIGLDP  296 (302)
Q Consensus       262 ---------~~-------------~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  296 (302)
                               .+             ....+++|..++.++..+......|..|...++
T Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~~~~g~~~~i~~~  239 (317)
T 3ajr_A          183 VEIFYYAVKREKYKCYLAPNRALPMMYMPDALKALVDLYEADRDKLVLRNGYNVTAY  239 (317)
T ss_dssp             HHHHHHHHTTCCEEECSCTTCCEEEEEHHHHHHHHHHHHHCCGGGCSSCSCEECCSE
T ss_pred             HHHHHHHHhCCCceeecCccceeeeeEHHHHHHHHHHHHhCCccccccCceEecCCc
Confidence                     00             134689999998888643333334555665553

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.78  E-value=3.8e-18  Score=172.47  Aligned_cols=190  Identities=18%  Similarity=0.131  Sum_probs=133.5

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhh-CCCceeEEEeeCCCHHHHHHHHHHHHhh
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSE-KGLPVNFFQLDVSDPSSIEAFVSWFKSN  104 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dlt~~~~~~~~~~~~~~~  104 (302)
                      ..+++++||||||+|+||++++++|+++|++|++++|+........+.+.. .+.++.++.+|++|.+++.+++++.   
T Consensus         7 ~~~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~~---   83 (699)
T 1z45_A            7 SESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEY---   83 (699)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHS---
T ss_pred             cccCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCHHHHHHHHHhC---
Confidence            446789999999999999999999999999999999976432222222221 1346788999999999998888753   


Q ss_pred             CCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccc
Q 022103          105 FAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILE  184 (302)
Q Consensus       105 ~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~  184 (302)
                        .+|+|||+||.....   ...+..++.+++|+.++.++++++...     +.++||++||..........+..     
T Consensus        84 --~~D~Vih~A~~~~~~---~~~~~~~~~~~~Nv~gt~~ll~a~~~~-----~~~~iV~~SS~~vyg~~~~~~~~-----  148 (699)
T 1z45_A           84 --KIDSVIHFAGLKAVG---ESTQIPLRYYHNNILGTVVLLELMQQY-----NVSKFVFSSSATVYGDATRFPNM-----  148 (699)
T ss_dssp             --CCCEEEECCSCCCHH---HHHHSHHHHHHHHHHHHHHHHHHHHHH-----TCCEEEEEEEGGGGCCGGGSTTC-----
T ss_pred             --CCCEEEECCcccCcC---ccccCHHHHHHHHHHHHHHHHHHHHHc-----CCCEEEEECcHHHhCCCcccccc-----
Confidence              689999999975321   122345678999999999998876542     35899999997654221100000     


Q ss_pred             hhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccC
Q 022103          185 DEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQT  256 (302)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T  256 (302)
                                            ....+...+.+...|+.+|++++.+++.++.++ ..|+++..+.|+.+..
T Consensus       149 ----------------------~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~g~~~~ilR~~~vyG  197 (699)
T 1z45_A          149 ----------------------IPIPEECPLGPTNPYGHTKYAIENILNDLYNSD-KKSWKFAILRYFNPIG  197 (699)
T ss_dssp             ----------------------CSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHS-TTSCEEEEEEECEEEC
T ss_pred             ----------------------CCccccCCCCCCChHHHHHHHHHHHHHHHHHhc-cCCCcEEEEEeccccC
Confidence                                  000011112234789999999999999998875 4689999999877654

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.78  E-value=1e-17  Score=162.34  Aligned_cols=189  Identities=16%  Similarity=0.064  Sum_probs=132.5

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHc---CCEEEEEecChhhHHHHHHHHhh----------------CCCceeEEEe
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAEL---GLTVILTARDVERGQRAVESLSE----------------KGLPVNFFQL   86 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~---G~~V~l~~r~~~~~~~~~~~l~~----------------~~~~~~~~~~   86 (302)
                      ...++++|+||||+|+||++++++|++.   |++|++++|+.+...... .+.+                ...++.++.+
T Consensus        69 ~~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~  147 (478)
T 4dqv_A           69 PSPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARR-RLEKTFDSGDPELLRHFKELAADRLEVVAG  147 (478)
T ss_dssp             CCSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHH-HHHGGGCSSCHHHHHHHHHHHTTTEEEEEC
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHH-HHHHHHHhcchhhhhhhhhhccCceEEEEe
Confidence            4567899999999999999999999999   999999999875432222 1111                1357899999


Q ss_pred             eCC------CHHHHHHHHHHHHhhCCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCc
Q 022103           87 DVS------DPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSR  160 (302)
Q Consensus        87 Dlt------~~~~~~~~~~~~~~~~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~  160 (302)
                      |++      +.+.+.++++       .+|+|||+||....       +.+++.+++|+.++.++++.+...     +.++
T Consensus       148 Dl~~~~~gld~~~~~~~~~-------~~D~Vih~Aa~~~~-------~~~~~~~~~Nv~gt~~ll~aa~~~-----~~~~  208 (478)
T 4dqv_A          148 DKSEPDLGLDQPMWRRLAE-------TVDLIVDSAAMVNA-------FPYHELFGPNVAGTAELIRIALTT-----KLKP  208 (478)
T ss_dssp             CTTSGGGGCCHHHHHHHHH-------HCCEEEECCSSCSB-------SSCCEEHHHHHHHHHHHHHHHTSS-----SCCC
T ss_pred             ECCCcccCCCHHHHHHHHc-------CCCEEEECccccCC-------cCHHHHHHHHHHHHHHHHHHHHhC-----CCCe
Confidence            999      5567777666       58999999998542       334567899999999999988652     4579


Q ss_pred             EEEecCCCcccccccCcccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHcc
Q 022103          161 ILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYE  240 (302)
Q Consensus       161 iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~  240 (302)
                      ||++||..........    ...++..+.+..              ...  .........|+.||.+.|.+++.++.+  
T Consensus       209 ~V~iSS~~v~~~~~~~----~~~E~~~~~p~~--------------~~~--~~~~~~~~~Y~~sK~~~E~~~~~~~~~--  266 (478)
T 4dqv_A          209 FTYVSTADVGAAIEPS----AFTEDADIRVIS--------------PTR--TVDGGWAGGYGTSKWAGEVLLREANDL--  266 (478)
T ss_dssp             EEEEEEGGGGTTSCTT----TCCSSSCHHHHC--------------CEE--ECCTTSEECHHHHHHHHHHHHHHHHHH--
T ss_pred             EEEEeehhhcCccCCC----CcCCcccccccC--------------ccc--ccccccccchHHHHHHHHHHHHHHHHH--
Confidence            9999997543221111    011111111100              000  000011255999999999999999987  


Q ss_pred             CCCcEEEEeecCcccCC
Q 022103          241 GEGISVNSYCPGFTQTS  257 (302)
Q Consensus       241 ~~gI~V~~v~PG~v~T~  257 (302)
                       .|+++++|.||.|..+
T Consensus       267 -~gi~~~ivRpg~v~G~  282 (478)
T 4dqv_A          267 -CALPVAVFRCGMILAD  282 (478)
T ss_dssp             -HCCCEEEEEECEEECC
T ss_pred             -hCCCeEEEECceeeCC
Confidence             4899999999999765

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.77  E-value=5.5e-18  Score=152.77  Aligned_cols=189  Identities=16%  Similarity=0.160  Sum_probs=139.1

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCc
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAAL  108 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~i  108 (302)
                      +.++++||||+|+||++++++|+++|++|++++|+                     .+|++|.+++.++++..     .+
T Consensus        11 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~---------------------~~Dl~d~~~~~~~~~~~-----~~   64 (292)
T 1vl0_A           11 HHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ---------------------DLDITNVLAVNKFFNEK-----KP   64 (292)
T ss_dssp             -CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT---------------------TCCTTCHHHHHHHHHHH-----CC
T ss_pred             ccceEEEECCCChHHHHHHHHHHhCCCeEEeccCc---------------------cCCCCCHHHHHHHHHhc-----CC
Confidence            45899999999999999999999999999999996                     27999999999888865     68


Q ss_pred             cEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhh
Q 022103          109 DILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEEL  188 (302)
Q Consensus       109 d~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  188 (302)
                      |+|||+||....   ..+.++++..+++|+.++.++++++.+.     +. +||++||...+.+....+           
T Consensus        65 d~vih~A~~~~~---~~~~~~~~~~~~~nv~~~~~l~~a~~~~-----~~-~iv~~SS~~v~~~~~~~~-----------  124 (292)
T 1vl0_A           65 NVVINCAAHTAV---DKCEEQYDLAYKINAIGPKNLAAAAYSV-----GA-EIVQISTDYVFDGEAKEP-----------  124 (292)
T ss_dssp             SEEEECCCCCCH---HHHHHCHHHHHHHHTHHHHHHHHHHHHH-----TC-EEEEEEEGGGSCSCCSSC-----------
T ss_pred             CEEEECCccCCH---HHHhcCHHHHHHHHHHHHHHHHHHHHHc-----CC-eEEEechHHeECCCCCCC-----------
Confidence            999999997532   1245678899999999999999998763     23 999999986643321110           


Q ss_pred             cHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCC-------
Q 022103          189 SEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG-------  261 (302)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~-------  261 (302)
                                          ..+...+.+...|+.+|.+.|.+++.++.       ++..|.|+.+..+ ...       
T Consensus       125 --------------------~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~-------~~~~lR~~~v~G~-~~~~~~~~~~  176 (292)
T 1vl0_A          125 --------------------ITEFDEVNPQSAYGKTKLEGENFVKALNP-------KYYIVRTAWLYGD-GNNFVKTMIN  176 (292)
T ss_dssp             --------------------BCTTSCCCCCSHHHHHHHHHHHHHHHHCS-------SEEEEEECSEESS-SSCHHHHHHH
T ss_pred             --------------------CCCCCCCCCccHHHHHHHHHHHHHHhhCC-------CeEEEeeeeeeCC-CcChHHHHHH
Confidence                                00111122346899999999999998764       2556667666644 111       


Q ss_pred             ---------------CCCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCc
Q 022103          262 ---------------QGSHTADEAADVGARLLLLHPQQLPTAKFYIGLDP  296 (302)
Q Consensus       262 ---------------~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  296 (302)
                                     .....++++|..++.++..+     .|..|...++
T Consensus       177 ~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~-----~~~~~~i~~~  221 (292)
T 1vl0_A          177 LGKTHDELKVVHDQVGTPTSTVDLARVVLKVIDEK-----NYGTFHCTCK  221 (292)
T ss_dssp             HHHHCSEEEEESSCEECCEEHHHHHHHHHHHHHHT-----CCEEEECCCB
T ss_pred             HHhcCCcEEeecCeeeCCccHHHHHHHHHHHHhcC-----CCcEEEecCC
Confidence                           11245899999999998742     3556655554

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.76  E-value=8.2e-18  Score=169.11  Aligned_cols=220  Identities=15%  Similarity=0.073  Sum_probs=154.8

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHc-CCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHH-HHHHHHHHHhhC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAEL-GLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSS-IEAFVSWFKSNF  105 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~-G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~-~~~~~~~~~~~~  105 (302)
                      +++++++||||+|+||++++++|+++ |++|++++|+..+.+..    . ...++.++.+|++|.++ +.++++      
T Consensus       313 ~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~----~-~~~~v~~v~~Dl~d~~~~~~~~~~------  381 (660)
T 1z7e_A          313 RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRF----L-NHPHFHFVEGDISIHSEWIEYHVK------  381 (660)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGG----T-TCTTEEEEECCTTTCHHHHHHHHH------
T ss_pred             ccCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhh----c-cCCceEEEECCCCCcHHHHHHhhc------
Confidence            46789999999999999999999998 89999999987653221    1 13468899999998765 555554      


Q ss_pred             CCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccch
Q 022103          106 AALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILED  185 (302)
Q Consensus       106 g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~  185 (302)
                       .+|+|||+||.....   ...+++++.+++|+.++.++++++...     + ++||++||...+......+     .++
T Consensus       382 -~~D~Vih~Aa~~~~~---~~~~~~~~~~~~Nv~gt~~ll~aa~~~-----~-~r~V~~SS~~vyg~~~~~~-----~~E  446 (660)
T 1z7e_A          382 -KCDVVLPLVAIATPI---EYTRNPLRVFELDFEENLRIIRYCVKY-----R-KRIIFPSTSEVYGMCSDKY-----FDE  446 (660)
T ss_dssp             -HCSEEEECCCCCCTH---HHHHSHHHHHHHHTHHHHHHHHHHHHT-----T-CEEEEECCGGGGBTCCSSS-----BCT
T ss_pred             -CCCEEEECceecCcc---ccccCHHHHHHhhhHHHHHHHHHHHHh-----C-CEEEEEecHHHcCCCCCcc-----cCC
Confidence             579999999975432   123556789999999999999888653     3 7999999976543221110     000


Q ss_pred             hhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCC----
Q 022103          186 EELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG----  261 (302)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~----  261 (302)
                      +...                   ....+...+...|+.||.+.|.+++.++.+   .|++++.|.||.+.++....    
T Consensus       447 ~~~~-------------------~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~---~gi~~~ilRpg~v~Gp~~~~~~~~  504 (660)
T 1z7e_A          447 DHSN-------------------LIVGPVNKPRWIYSVSKQLLDRVIWAYGEK---EGLQFTLFRPFNWMGPRLDNLNAA  504 (660)
T ss_dssp             TTCC-------------------EEECCTTCTTHHHHHHHHHHHHHHHHHHHH---HCCCEEEEEECSEESTTSSCHHHH
T ss_pred             Cccc-------------------cccCcccCCCCCcHHHHHHHHHHHHHHHHH---cCCCEEEECCCcccCCCccccccc
Confidence            0000                   000000122357999999999999999987   38999999999998876421    


Q ss_pred             ----C--------------------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCc
Q 022103          262 ----Q--------------------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDP  296 (302)
Q Consensus       262 ----~--------------------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  296 (302)
                          .                          .....+++|..++.++. .+.....|.+|...++
T Consensus       505 ~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~ai~~~l~-~~~~~~~g~~~ni~~~  568 (660)
T 1z7e_A          505 RIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIE-NAGNRCDGEIINIGNP  568 (660)
T ss_dssp             TTTCSCHHHHHHHHHHHTCCEEEEGGGCCEEECEEHHHHHHHHHHHHH-CGGGTTTTEEEEECCG
T ss_pred             cccccchHHHHHHHHHcCCCcEEeCCCCeEEEEEEHHHHHHHHHHHHh-CccccCCCeEEEECCC
Confidence                0                          01457999999999886 3333346777777664

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=99.76  E-value=9.2e-18  Score=152.07  Aligned_cols=173  Identities=16%  Similarity=0.153  Sum_probs=126.9

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcC-CEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCccE
Q 022103           32 IAIVTGANKGIGFALVKRLAELG-LTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDI  110 (302)
Q Consensus        32 ~vlItGas~gIG~ala~~l~~~G-~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id~  110 (302)
                      +++||||+|+||++++++|+++| ++|++++|+.....  ...+.    .+. +.+|+++.+.++++++...  ++.+|+
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~~----~~~-~~~d~~~~~~~~~~~~~~~--~~~~d~   71 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNLV----DLN-IADYMDKEDFLIQIMAGEE--FGDVEA   71 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGG--GHHHH----TSC-CSEEEEHHHHHHHHHTTCC--CSSCCE
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCch--hhhcC----cce-eccccccHHHHHHHHhccc--cCCCcE
Confidence            38999999999999999999999 99999999865421  11122    122 6789999888877765211  236999


Q ss_pred             EEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhhcH
Q 022103          111 LVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSE  190 (302)
Q Consensus       111 lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~  190 (302)
                      |||+||....     +.++++..+++|+.++.++++++...     +. +||++||..........+    . ++     
T Consensus        72 vi~~a~~~~~-----~~~~~~~~~~~n~~~~~~l~~a~~~~-----~~-~~v~~SS~~v~g~~~~~~----~-~E-----  130 (310)
T 1eq2_A           72 IFHEGACSST-----TEWDGKYMMDNNYQYSKELLHYCLER-----EI-PFLYASSAATYGGRTSDF----I-ES-----  130 (310)
T ss_dssp             EEECCSCCCT-----TCCCHHHHHHHTHHHHHHHHHHHHHH-----TC-CEEEEEEGGGGTTCCSCB----C-SS-----
T ss_pred             EEECcccccC-----cccCHHHHHHHHHHHHHHHHHHHHHc-----CC-eEEEEeeHHHhCCCCCCC----C-CC-----
Confidence            9999997543     33456788999999999999998664     35 999999986542221100    0 00     


Q ss_pred             HHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCC
Q 022103          191 EQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSM  258 (302)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~  258 (302)
                                           ...+.+...|+.+|.+.+.+++.++.+   .|++++.|.||.+.++.
T Consensus       131 ---------------------~~~~~p~~~Y~~sK~~~e~~~~~~~~~---~g~~~~~lrp~~v~G~~  174 (310)
T 1eq2_A          131 ---------------------REYEKPLNVYGYSKFLFDEYVRQILPE---ANSQIVGFRYFNVYGPR  174 (310)
T ss_dssp             ---------------------GGGCCCSSHHHHHHHHHHHHHHHHGGG---CSSCEEEEEECEEESSS
T ss_pred             ---------------------CCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeCCcEECcC
Confidence                                 001122468999999999999999876   58999999999998765

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.75  E-value=6.3e-18  Score=151.98  Aligned_cols=187  Identities=14%  Similarity=0.124  Sum_probs=139.8

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCccEE
Q 022103           32 IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDIL  111 (302)
Q Consensus        32 ~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id~l  111 (302)
                      +++||||+|+||+++++.|+++|++|++++|.                     .+|++|.+++.++++..     .+|+|
T Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~---------------------~~D~~d~~~~~~~~~~~-----~~d~v   60 (287)
T 3sc6_A            7 RVIITGANGQLGKQLQEELNPEEYDIYPFDKK---------------------LLDITNISQVQQVVQEI-----RPHII   60 (287)
T ss_dssp             EEEEESTTSHHHHHHHHHSCTTTEEEEEECTT---------------------TSCTTCHHHHHHHHHHH-----CCSEE
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeccc---------------------ccCCCCHHHHHHHHHhc-----CCCEE
Confidence            79999999999999999999999999999992                     27999999999998876     68999


Q ss_pred             EEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhhcHH
Q 022103          112 VNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEE  191 (302)
Q Consensus       112 v~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~  191 (302)
                      ||+||.....   ...++++..+++|+.++.++++++...      ..+||++||...+.+....+              
T Consensus        61 i~~a~~~~~~---~~~~~~~~~~~~n~~~~~~l~~~~~~~------~~~~v~~SS~~vy~~~~~~~--------------  117 (287)
T 3sc6_A           61 IHCAAYTKVD---QAEKERDLAYVINAIGARNVAVASQLV------GAKLVYISTDYVFQGDRPEG--------------  117 (287)
T ss_dssp             EECCCCCCHH---HHTTCHHHHHHHHTHHHHHHHHHHHHH------TCEEEEEEEGGGSCCCCSSC--------------
T ss_pred             EECCcccChH---HHhcCHHHHHHHHHHHHHHHHHHHHHc------CCeEEEEchhhhcCCCCCCC--------------
Confidence            9999986432   223567889999999999999998654      24799999986653322111              


Q ss_pred             HHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC---------
Q 022103          192 QIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ---------  262 (302)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~---------  262 (302)
                                       +.+...+.+...|+.+|.+.|.+++.++.       +++.+.|+.+..+.....         
T Consensus       118 -----------------~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~-------~~~ilR~~~v~G~~~~~~~~~~~~~~~  173 (287)
T 3sc6_A          118 -----------------YDEFHNPAPINIYGASKYAGEQFVKELHN-------KYFIVRTSWLYGKYGNNFVKTMIRLGK  173 (287)
T ss_dssp             -----------------BCTTSCCCCCSHHHHHHHHHHHHHHHHCS-------SEEEEEECSEECSSSCCHHHHHHHHHT
T ss_pred             -----------------CCCCCCCCCCCHHHHHHHHHHHHHHHhCC-------CcEEEeeeeecCCCCCcHHHHHHHHHH
Confidence                             11112233457899999999999988764       357888998877643321         


Q ss_pred             -------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCC
Q 022103          263 -------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLD  295 (302)
Q Consensus       263 -------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~  295 (302)
                                   .....+++|..++.++..+.    .|.+.+..+
T Consensus       174 ~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~----~~~~~i~~~  215 (287)
T 3sc6_A          174 EREEISVVADQIGSPTYVADLNVMINKLIHTSL----YGTYHVSNT  215 (287)
T ss_dssp             TCSEEEEECSCEECCEEHHHHHHHHHHHHTSCC----CEEEECCCB
T ss_pred             cCCCeEeecCcccCceEHHHHHHHHHHHHhCCC----CCeEEEcCC
Confidence                         12458999999999987332    454444443

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=99.74  E-value=1.3e-17  Score=150.84  Aligned_cols=210  Identities=13%  Similarity=0.032  Sum_probs=144.5

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      .++++++||||||+|+||+++++.|.++|+      +..           .....+..+.+|++|.+++.++++..    
T Consensus         2 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~-----------~~~~~~~~~~~D~~d~~~~~~~~~~~----   60 (319)
T 4b8w_A            2 LYFQSMRILVTGGSGLVGKAIQKVVADGAG------LPG-----------EDWVFVSSKDADLTDTAQTRALFEKV----   60 (319)
T ss_dssp             CCCCCCEEEEETCSSHHHHHHHHHHHTTTC------CTT-----------CEEEECCTTTCCTTSHHHHHHHHHHS----
T ss_pred             ccccCCeEEEECCCcHHHHHHHHHHHhcCC------ccc-----------ccccccCceecccCCHHHHHHHHhhc----
Confidence            346788999999999999999999999998      110           00112344578999999999888753    


Q ss_pred             CCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccch
Q 022103          106 AALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILED  185 (302)
Q Consensus       106 g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~  185 (302)
                       ++|+|||+|+.....  ..+.+++++.+++|+.++.++++++...     +.++||++||...+......+    . ++
T Consensus        61 -~~d~Vih~A~~~~~~--~~~~~~~~~~~~~nv~gt~~ll~a~~~~-----~~~~~v~~SS~~vyg~~~~~~----~-~E  127 (319)
T 4b8w_A           61 -QPTHVIHLAAMVGGL--FRNIKYNLDFWRKNVHMNDNVLHSAFEV-----GARKVVSCLSTCIFPDKTTYP----I-DE  127 (319)
T ss_dssp             -CCSEEEECCCCCCCH--HHHTTCHHHHHHHHHHHHHHHHHHHHHT-----TCSEEEEECCGGGSCSSCCSS----B-CG
T ss_pred             -CCCEEEECceecccc--cccccCHHHHHHHHHHHHHHHHHHHHHc-----CCCeEEEEcchhhcCCCCCCC----c-cc
Confidence             699999999985321  1233456778999999999999987543     457999999986542221111    0 00


Q ss_pred             hhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC---
Q 022103          186 EELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ---  262 (302)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~---  262 (302)
                      +.                    .+.... .+....|+.+|.+.|.+++.++.+   .|++++.+.|+.+..+.....   
T Consensus       128 ~~--------------------~~~~~~-~p~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~Gp~~~~~~~~  183 (319)
T 4b8w_A          128 TM--------------------IHNGPP-HNSNFGYSYAKRMIDVQNRAYFQQ---YGCTFTAVIPTNVFGPHDNFNIED  183 (319)
T ss_dssp             GG--------------------GGBSCC-CSSSHHHHHHHHHHHHHHHHHHHH---HCCEEEEEEECEEECTTCCCCTTT
T ss_pred             cc--------------------cccCCC-CCCcchHHHHHHHHHHHHHHHHHh---hCCCEEEEeeccccCCCCCCCCcc
Confidence            00                    000011 111236999999999999999987   489999999999987653210   


Q ss_pred             ------------------------C-------CCCHHHHHHHHHHHhhcCCCCCCCcceeecCC
Q 022103          263 ------------------------G-------SHTADEAADVGARLLLLHPQQLPTAKFYIGLD  295 (302)
Q Consensus       263 ------------------------~-------~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~  295 (302)
                                              +       .+..+++|..++.++..+. . ..+.+|...+
T Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~-~-~~~~~~ni~~  245 (319)
T 4b8w_A          184 GHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQFIYSLDLAQLFIWVLREYN-E-VEPIILSVGE  245 (319)
T ss_dssp             SCHHHHHHHHHHHHHHHTCCEEEESCSCCEECEEEHHHHHHHHHHHHHHCC-C-SSCEEECCCG
T ss_pred             ccccHHHHHHHHHHhccCCceEEeCCCCeeEEEEeHHHHHHHHHHHHhccc-c-CCceEEEecC
Confidence                                    1       1567999999999887432 2 3455665543

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=99.73  E-value=5.8e-17  Score=147.80  Aligned_cols=170  Identities=14%  Similarity=0.106  Sum_probs=126.7

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCc
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAAL  108 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~i  108 (302)
                      ++++++||||+|+||++++++|+++|++|+++.|+.                    .+|++|.+++.+++++.     .+
T Consensus         2 ~~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~--------------------~~D~~d~~~~~~~~~~~-----~~   56 (321)
T 1e6u_A            2 AKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD--------------------ELNLLDSRAVHDFFASE-----RI   56 (321)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT--------------------TCCTTCHHHHHHHHHHH-----CC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc--------------------cCCccCHHHHHHHHHhc-----CC
Confidence            457899999999999999999999999999988763                    27999999999888765     68


Q ss_pred             cEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhh
Q 022103          109 DILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEEL  188 (302)
Q Consensus       109 d~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  188 (302)
                      |+|||+||....  .....++++..+++|+.++.++++++...     +.++||++||...+......+     .+++. 
T Consensus        57 d~vih~a~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~~~~v~~SS~~vyg~~~~~~-----~~E~~-  123 (321)
T 1e6u_A           57 DQVYLAAAKVGG--IVANNTYPADFIYQNMMIESNIIHAAHQN-----DVNKLLFLGSSCIYPKLAKQP-----MAESE-  123 (321)
T ss_dssp             SEEEECCCCCCC--HHHHHHCHHHHHHHHHHHHHHHHHHHHHT-----TCCEEEEECCGGGSCTTCCSS-----BCGGG-
T ss_pred             CEEEEcCeecCC--cchhhhCHHHHHHHHHHHHHHHHHHHHHh-----CCCeEEEEccHHHcCCCCCCC-----cCccc-
Confidence            999999997532  11234566788999999999999988652     357999999976643221110     00000 


Q ss_pred             cHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCC
Q 022103          189 SEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMT  259 (302)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~  259 (302)
                                          +...+..+....|+.+|.+.|.+++.++.+   .|++++.|.|+.+..+..
T Consensus       124 --------------------~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilrp~~v~G~~~  171 (321)
T 1e6u_A          124 --------------------LLQGTLEPTNEPYAIAKIAGIKLCESYNRQ---YGRDYRSVMPTNLYGPHD  171 (321)
T ss_dssp             --------------------TTSSCCCGGGHHHHHHHHHHHHHHHHHHHH---HCCEEEEEEECEEESTTC
T ss_pred             --------------------cccCCCCCCCCccHHHHHHHHHHHHHHHHH---hCCCEEEEEeCCcCCcCC
Confidence                                000000111257999999999999999987   489999999999987653

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.73  E-value=1.5e-17  Score=148.06  Aligned_cols=191  Identities=20%  Similarity=0.208  Sum_probs=138.3

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCccEE
Q 022103           32 IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDIL  111 (302)
Q Consensus        32 ~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id~l  111 (302)
                      +++||||+|+||++++++|+ +|++|++++|+.+. +        .+     +.+|++|.+++.++++.+     ++|+|
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~~-~--------~~-----~~~Dl~~~~~~~~~~~~~-----~~d~v   61 (273)
T 2ggs_A            2 RTLITGASGQLGIELSRLLS-ERHEVIKVYNSSEI-Q--------GG-----YKLDLTDFPRLEDFIIKK-----RPDVI   61 (273)
T ss_dssp             CEEEETTTSHHHHHHHHHHT-TTSCEEEEESSSCC-T--------TC-----EECCTTSHHHHHHHHHHH-----CCSEE
T ss_pred             EEEEECCCChhHHHHHHHHh-cCCeEEEecCCCcC-C--------CC-----ceeccCCHHHHHHHHHhc-----CCCEE
Confidence            58999999999999999999 58999999998742 1        11     789999999999998875     68999


Q ss_pred             EEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhhcHH
Q 022103          112 VNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEE  191 (302)
Q Consensus       112 v~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~  191 (302)
                      |||||.....   .+.++++..+++|+.++.++++++.+    .  .++||++||..+..+...                
T Consensus        62 i~~a~~~~~~---~~~~~~~~~~~~n~~~~~~l~~~~~~----~--~~~iv~~SS~~~~~~~~~----------------  116 (273)
T 2ggs_A           62 INAAAMTDVD---KCEIEKEKAYKINAEAVRHIVRAGKV----I--DSYIVHISTDYVFDGEKG----------------  116 (273)
T ss_dssp             EECCCCCCHH---HHHHCHHHHHHHHTHHHHHHHHHHHH----T--TCEEEEEEEGGGSCSSSC----------------
T ss_pred             EECCcccChh---hhhhCHHHHHHHhHHHHHHHHHHHHH----h--CCeEEEEecceeEcCCCC----------------
Confidence            9999975421   34577889999999999999999865    2  259999999877543221                


Q ss_pred             HHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCC--------C---
Q 022103          192 QIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMT--------Q---  260 (302)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~--------~---  260 (302)
                                      ...+...+.+...|+.+|++++.+++.    .....||++.|. |  .+++.        .   
T Consensus       117 ----------------~~~e~~~~~~~~~Y~~sK~~~e~~~~~----~~~~~iR~~~v~-G--~~~~~~~~~~~~~~~~~  173 (273)
T 2ggs_A          117 ----------------NYKEEDIPNPINYYGLSKLLGETFALQ----DDSLIIRTSGIF-R--NKGFPIYVYKTLKEGKT  173 (273)
T ss_dssp             ----------------SBCTTSCCCCSSHHHHHHHHHHHHHCC----TTCEEEEECCCB-S--SSSHHHHHHHHHHTTCC
T ss_pred             ----------------CcCCCCCCCCCCHHHHHHHHHHHHHhC----CCeEEEeccccc-c--ccHHHHHHHHHHHcCCC
Confidence                            001111122347899999999999987    223456666665 3  12211        0   


Q ss_pred             ------CCCCCCHHHHHHHHHHHhhcCCCCCCCcceeecCC
Q 022103          261 ------GQGSHTADEAADVGARLLLLHPQQLPTAKFYIGLD  295 (302)
Q Consensus       261 ------~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~  295 (302)
                            ......++++|..++.++..+    .+| .|...+
T Consensus       174 ~~~~~~~~~~~~~~dva~~i~~~~~~~----~~g-~~~i~~  209 (273)
T 2ggs_A          174 VFAFKGYYSPISARKLASAILELLELR----KTG-IIHVAG  209 (273)
T ss_dssp             EEEESCEECCCBHHHHHHHHHHHHHHT----CCE-EEECCC
T ss_pred             EEeecCCCCceEHHHHHHHHHHHHhcC----cCC-eEEECC
Confidence                  113467999999999998743    256 555554

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.73  E-value=7.4e-17  Score=144.84  Aligned_cols=180  Identities=16%  Similarity=0.118  Sum_probs=136.7

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHc--CCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCc
Q 022103           31 TIAIVTGANKGIGFALVKRLAEL--GLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAAL  108 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~--G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~i  108 (302)
                      ++++||||+|+||++++++|+++  |++|++++|+.++.+...    .  ..+.++.+|++|.+++.++++       .+
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~----~--~~~~~~~~D~~d~~~l~~~~~-------~~   67 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLA----D--QGVEVRHGDYNQPESLQKAFA-------GV   67 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHH----H--TTCEEEECCTTCHHHHHHHTT-------TC
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHh----h--cCCeEEEeccCCHHHHHHHHh-------cC
Confidence            46999999999999999999999  999999999876654322    1  257889999999998887765       58


Q ss_pred             cEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhh
Q 022103          109 DILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEEL  188 (302)
Q Consensus       109 d~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  188 (302)
                      |+|||+||...      . +      ++|+.++.++++++..    . +.++||++||.... .   .            
T Consensus        68 d~vi~~a~~~~------~-~------~~n~~~~~~l~~a~~~----~-~~~~~v~~Ss~~~~-~---~------------  113 (287)
T 2jl1_A           68 SKLLFISGPHY------D-N------TLLIVQHANVVKAARD----A-GVKHIAYTGYAFAE-E---S------------  113 (287)
T ss_dssp             SEEEECCCCCS------C-H------HHHHHHHHHHHHHHHH----T-TCSEEEEEEETTGG-G---C------------
T ss_pred             CEEEEcCCCCc------C-c------hHHHHHHHHHHHHHHH----c-CCCEEEEECCCCCC-C---C------------
Confidence            99999999631      1 1      5788899888888754    2 45799999997653 1   0            


Q ss_pred             cHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCC-------
Q 022103          189 SEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG-------  261 (302)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~-------  261 (302)
                                                |   ..|+.+|.+.|.+++.       .|++++.+.||.+.++....       
T Consensus       114 --------------------------~---~~y~~~K~~~E~~~~~-------~~~~~~ilrp~~~~~~~~~~~~~~~~~  157 (287)
T 2jl1_A          114 --------------------------I---IPLAHVHLATEYAIRT-------TNIPYTFLRNALYTDFFVNEGLRASTE  157 (287)
T ss_dssp             --------------------------C---STHHHHHHHHHHHHHH-------TTCCEEEEEECCBHHHHSSGGGHHHHH
T ss_pred             --------------------------C---CchHHHHHHHHHHHHH-------cCCCeEEEECCEeccccchhhHHHHhh
Confidence                                      1   3699999999998752       58999999999886654111       


Q ss_pred             ------------CCCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCc
Q 022103          262 ------------QGSHTADEAADVGARLLLLHPQQLPTAKFYIGLDP  296 (302)
Q Consensus       262 ------------~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  296 (302)
                                  ......+++|..++.++..+ .  ..|..|...++
T Consensus       158 ~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~-~--~~g~~~~i~~~  201 (287)
T 2jl1_A          158 SGAIVTNAGSGIVNSVTRNELALAAATVLTEE-G--HENKTYNLVSN  201 (287)
T ss_dssp             HTEEEESCTTCCBCCBCHHHHHHHHHHHHTSS-S--CTTEEEEECCS
T ss_pred             CCceeccCCCCccCccCHHHHHHHHHHHhcCC-C--CCCcEEEecCC
Confidence                        12367899999999998632 2  35767766655

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=99.73  E-value=5e-18  Score=154.39  Aligned_cols=204  Identities=12%  Similarity=-0.031  Sum_probs=138.1

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhh--CCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSE--KGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~--~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      +.+++|+||||+|+||++++++|+++|++|++++|+..........+..  ....+.++.+|++                
T Consensus         5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~----------------   68 (321)
T 3vps_A            5 TLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLS----------------   68 (321)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHHT----------------
T ss_pred             cCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhccCCCeeEEeCccc----------------
Confidence            4578999999999999999999999999999999986510000000100  1123445555555                


Q ss_pred             CCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccch
Q 022103          106 AALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILED  185 (302)
Q Consensus       106 g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~  185 (302)
                       .+|+|||+||......   ..+.....++ |+.++.++++++...     +.++||++||...+......+        
T Consensus        69 -~~d~vi~~a~~~~~~~---~~~~~~~~~~-n~~~~~~ll~a~~~~-----~v~~~v~~SS~~v~~~~~~~~--------  130 (321)
T 3vps_A           69 -DVRLVYHLASHKSVPR---SFKQPLDYLD-NVDSGRHLLALCTSV-----GVPKVVVGSTCEVYGQADTLP--------  130 (321)
T ss_dssp             -TEEEEEECCCCCCHHH---HTTSTTTTHH-HHHHHHHHHHHHHHH-----TCCEEEEEEEGGGGCSCSSSS--------
T ss_pred             -cCCEEEECCccCChHH---HHhCHHHHHH-HHHHHHHHHHHHHHc-----CCCeEEEecCHHHhCCCCCCC--------
Confidence             6899999999764311   1122234566 999999999988654     357999999977643321111        


Q ss_pred             hhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCc-EEEEeecCcccCCCCCCC--
Q 022103          186 EELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGI-SVNSYCPGFTQTSMTQGQ--  262 (302)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI-~V~~v~PG~v~T~~~~~~--  262 (302)
                                             ..+...+.+...|+.+|.+.|.+++.++.+   .|+ +++.+.|+.+..+.....  
T Consensus       131 -----------------------~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~ilRp~~v~G~~~~~~~~  184 (321)
T 3vps_A          131 -----------------------TPEDSPLSPRSPYAASKVGLEMVAGAHQRA---SVAPEVGIVRFFNVYGPGERPDAL  184 (321)
T ss_dssp             -----------------------BCTTSCCCCCSHHHHHHHHHHHHHHHHHHS---SSSCEEEEEEECEEECTTCCTTSH
T ss_pred             -----------------------CCCCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCceEEEEeccccCcCCCCCCh
Confidence                                   011111223478999999999999999986   689 999999999988764421  


Q ss_pred             ------------------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCc
Q 022103          263 ------------------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDP  296 (302)
Q Consensus       263 ------------------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  296 (302)
                                              ..+..+++|..++.++.. +..   | .|...++
T Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~-~~~---g-~~~i~~~  237 (321)
T 3vps_A          185 VPRLCANLLTRNELPVEGDGEQRRDFTYITDVVDKLVALANR-PLP---S-VVNFGSG  237 (321)
T ss_dssp             HHHHHHHHHHHSEEEEETTSCCEECEEEHHHHHHHHHHGGGS-CCC---S-EEEESCS
T ss_pred             HHHHHHHHHcCCCeEEeCCCCceEceEEHHHHHHHHHHHHhc-CCC---C-eEEecCC
Confidence                                    114689999999999873 322   6 5555443

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=99.71  E-value=3.5e-17  Score=147.79  Aligned_cols=194  Identities=16%  Similarity=0.137  Sum_probs=140.2

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCccEE
Q 022103           32 IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDIL  111 (302)
Q Consensus        32 ~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id~l  111 (302)
                      +++||||+|+||++++++|+ +|++|++++|+..                 ++.+|++|.+++.++++..     ++|+|
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~-----------------~~~~D~~d~~~~~~~~~~~-----~~d~v   58 (299)
T 1n2s_A            2 NILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK-----------------EFCGDFSNPKGVAETVRKL-----RPDVI   58 (299)
T ss_dssp             EEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS-----------------SSCCCTTCHHHHHHHHHHH-----CCSEE
T ss_pred             eEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc-----------------cccccCCCHHHHHHHHHhc-----CCCEE
Confidence            59999999999999999999 8999999999861                 3568999999999888865     68999


Q ss_pred             EEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhhcHH
Q 022103          112 VNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEE  191 (302)
Q Consensus       112 v~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~  191 (302)
                      ||+||.....   .+.++++..+++|+.++.++++++...     + .+||++||...+.+....+              
T Consensus        59 ih~a~~~~~~---~~~~~~~~~~~~n~~~~~~l~~a~~~~-----~-~~~v~~SS~~vy~~~~~~~--------------  115 (299)
T 1n2s_A           59 VNAAAHTAVD---KAESEPELAQLLNATSVEAIAKAANET-----G-AWVVHYSTDYVFPGTGDIP--------------  115 (299)
T ss_dssp             EECCCCCCHH---HHTTCHHHHHHHHTHHHHHHHHHHTTT-----T-CEEEEEEEGGGSCCCTTCC--------------
T ss_pred             EECcccCCHh---hhhcCHHHHHHHHHHHHHHHHHHHHHc-----C-CcEEEEecccEEeCCCCCC--------------
Confidence            9999975321   123456788999999999999988542     2 4899999986643321110              


Q ss_pred             HHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC---------
Q 022103          192 QIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ---------  262 (302)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~---------  262 (302)
                                       ..+...+.+...|+.+|.+.|.+++.++.       +++.+.|+.+.++.....         
T Consensus       116 -----------------~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~-------~~~ilRp~~v~G~~~~~~~~~~~~~~~  171 (299)
T 1n2s_A          116 -----------------WQETDATSPLNVYGKTKLAGEKALQDNCP-------KHLIFRTSWVYAGKGNNFAKTMLRLAK  171 (299)
T ss_dssp             -----------------BCTTSCCCCSSHHHHHHHHHHHHHHHHCS-------SEEEEEECSEECSSSCCHHHHHHHHHH
T ss_pred             -----------------CCCCCCCCCccHHHHHHHHHHHHHHHhCC-------CeEEEeeeeecCCCcCcHHHHHHHHHh
Confidence                             00111122346899999999999988752       788899999987753321         


Q ss_pred             -------------CCCCHHHHHHHHHHHhhcCCCCCC-CcceeecCCc
Q 022103          263 -------------GSHTADEAADVGARLLLLHPQQLP-TAKFYIGLDP  296 (302)
Q Consensus       263 -------------~~~~~~~~a~~~~~l~~~~~~~~~-~G~~~~~~~~  296 (302)
                                   .....+++|..++.++..+ .... .|..|...++
T Consensus       172 ~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~-~~~~~~~~~~~i~~~  218 (299)
T 1n2s_A          172 ERQTLSVINDQYGAPTGAELLADCTAHAIRVA-LNKPEVAGLYHLVAG  218 (299)
T ss_dssp             HCSEEEEECSCEECCEEHHHHHHHHHHHHHHH-HHCGGGCEEEECCCB
T ss_pred             cCCCEEeecCcccCCeeHHHHHHHHHHHHHHh-ccccccCceEEEeCC
Confidence                         1134799999999988632 1112 3455555543

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=99.70  E-value=1.5e-17  Score=149.68  Aligned_cols=197  Identities=17%  Similarity=0.093  Sum_probs=139.4

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCc
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAAL  108 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~i  108 (302)
                      ++++++||| +|+||++++++|+++|++|++++|+.+++          ...+.++.+|++|.+++.++++      +++
T Consensus         2 ~~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~----------~~~~~~~~~Dl~d~~~~~~~~~------~~~   64 (286)
T 3gpi_A            2 SLSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM----------PAGVQTLIADVTRPDTLASIVH------LRP   64 (286)
T ss_dssp             CCCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC----------CTTCCEEECCTTCGGGCTTGGG------GCC
T ss_pred             CCCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc----------ccCCceEEccCCChHHHHHhhc------CCC
Confidence            457899999 59999999999999999999999987652          2468899999999998877665      369


Q ss_pred             cEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhh
Q 022103          109 DILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEEL  188 (302)
Q Consensus       109 d~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  188 (302)
                      |+|||+||..        ..+++..+++|+.++.++++++..    . +.++||++||...+......+           
T Consensus        65 d~vih~a~~~--------~~~~~~~~~~n~~~~~~ll~a~~~----~-~~~~~v~~SS~~vyg~~~~~~-----------  120 (286)
T 3gpi_A           65 EILVYCVAAS--------EYSDEHYRLSYVEGLRNTLSALEG----A-PLQHVFFVSSTGVYGQEVEEW-----------  120 (286)
T ss_dssp             SEEEECHHHH--------HHC-----CCSHHHHHHHHHHTTT----S-CCCEEEEEEEGGGCCCCCSSE-----------
T ss_pred             CEEEEeCCCC--------CCCHHHHHHHHHHHHHHHHHHHhh----C-CCCEEEEEcccEEEcCCCCCC-----------
Confidence            9999999863        244567889999999999998863    2 468999999976543221110           


Q ss_pred             cHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC------
Q 022103          189 SEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ------  262 (302)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~------  262 (302)
                                          ..+...+.+...|+.+|.+.|.+ +..        ++++.+.|+.+..+....+      
T Consensus       121 --------------------~~E~~~~~p~~~Y~~sK~~~E~~-~~~--------~~~~ilR~~~v~G~~~~~~~~~~~~  171 (286)
T 3gpi_A          121 --------------------LDEDTPPIAKDFSGKRMLEAEAL-LAA--------YSSTILRFSGIYGPGRLRMIRQAQT  171 (286)
T ss_dssp             --------------------ECTTSCCCCCSHHHHHHHHHHHH-GGG--------SSEEEEEECEEEBTTBCHHHHHTTC
T ss_pred             --------------------CCCCCCCCCCChhhHHHHHHHHH-Hhc--------CCeEEEecccccCCCchhHHHHHHh
Confidence                                00111122347899999999988 542        7889999999887654311      


Q ss_pred             -----------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCc
Q 022103          263 -----------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDP  296 (302)
Q Consensus       263 -----------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  296 (302)
                                 ..+..+++|..++.++..+... ..|.+|...++
T Consensus       172 ~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~-~~~~~~~~~~~  215 (286)
T 3gpi_A          172 PEQWPARNAWTNRIHRDDGAAFIAYLIQQRSHA-VPERLYIVTDN  215 (286)
T ss_dssp             GGGSCSSBCEECEEEHHHHHHHHHHHHHHHTTS-CCCSEEEECCS
T ss_pred             cccCCCcCceeEEEEHHHHHHHHHHHHhhhccC-CCCceEEEeCC
Confidence                       1256799999999998743212 33555555443

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.70  E-value=2.1e-16  Score=153.95  Aligned_cols=215  Identities=12%  Similarity=0.060  Sum_probs=147.6

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhH---HHHHHHHh---------hCCCceeEEEeeCCCHHHHHH
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERG---QRAVESLS---------EKGLPVNFFQLDVSDPSSIEA   96 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~---~~~~~~l~---------~~~~~~~~~~~Dlt~~~~~~~   96 (302)
                      +.++|+||||+|+||++++++|.+.|++|++++|+..+.   +...+.+.         ....++.++.+|+++.+.+. 
T Consensus       149 ~~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~-  227 (508)
T 4f6l_B          149 PLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV-  227 (508)
T ss_dssp             CCEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC-
T ss_pred             CCCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC-
Confidence            357999999999999999999998899999999987632   22222221         12458999999999987776 


Q ss_pred             HHHHHHhhCCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccC
Q 022103           97 FVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRN  176 (302)
Q Consensus        97 ~~~~~~~~~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~  176 (302)
                             ....+|+|||+|+...      ....++..+.+|+.++.++++.+..      ..+++|++||...  +....
T Consensus       228 -------~~~~~D~Vih~Aa~~~------~~~~~~~~~~~Nv~gt~~ll~~a~~------~~~~~v~iSS~~v--G~~~~  286 (508)
T 4f6l_B          228 -------LPENMDTIIHAGARTD------HFGDDDEFEKVNVQGTVDVIRLAQQ------HHARLIYVSTISV--GTYFD  286 (508)
T ss_dssp             -------CSSCCSEEEECCCC--------------CCHHHHHHHHHHHHHHHHT------TTCEEEEEEESCT--TSEEC
T ss_pred             -------CccCCCEEEECCceec------CCCCHHHHhhhHHHHHHHHHHHHHh------CCCcEEEeCChhh--ccCCc
Confidence                   3468999999999753      1234677899999999999998865      2478999999887  22110


Q ss_pred             c-ccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCccc
Q 022103          177 P-NIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQ  255 (302)
Q Consensus       177 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~  255 (302)
                      . ......+++.                     +.  ..+.....|+.+|.+.|.+++.++.    .|++++.+.||.|.
T Consensus       287 ~~~~~~~~~E~~---------------------~~--~~~~~~~~Y~~sK~~~E~~~~~~~~----~gi~~~ilRp~~v~  339 (508)
T 4f6l_B          287 IDTEDVTFSEAD---------------------VY--KGQLLTSPYTRSKFYSELKVLEAVN----NGLDGRIVRVGNLT  339 (508)
T ss_dssp             TTCSCCEECTTC---------------------SC--SSBCCCSHHHHHHHHHHHHHHHHHH----TTCEEEEEEECCEE
T ss_pred             cCCcCccccccc---------------------cc--ccccCCCcHHHHHHHHHHHHHHHHH----cCCCEEEEecceec
Confidence            0 0000000000                     00  0011347899999999999998764    58999999999998


Q ss_pred             CCCCCCC--------------------C------------CCCHHHHHHHHHHHhhcCCCCCCCcceeecCCc
Q 022103          256 TSMTQGQ--------------------G------------SHTADEAADVGARLLLLHPQQLPTAKFYIGLDP  296 (302)
Q Consensus       256 T~~~~~~--------------------~------------~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  296 (302)
                      .+....+                    +            ....+++|..++.++..+.    .|.+|...++
T Consensus       340 G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~~~~v~v~DvA~ai~~~~~~~~----~~~~~nl~~~  408 (508)
T 4f6l_B          340 SPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGVSMAEMPVDFSFVDTTARQIVALAQVNT----PQIIYHVLSP  408 (508)
T ss_dssp             SCSSSCCCCTTCTTCHHHHHHHHHTTCSEEETTGGGSEEECEEHHHHHHHHHHHTTBCC----SCSEEEESCS
T ss_pred             cCCCCCcccCCcchHHHHHHHHHHHHcCCCCCCccCceEEEEcHHHHHHHHHHHHhCCC----CCCEEEeCCC
Confidence            7754332                    0            1446999999999986432    4555655444

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.69  E-value=4e-16  Score=139.80  Aligned_cols=177  Identities=14%  Similarity=0.134  Sum_probs=129.5

Q ss_pred             EEEEeCCCchHHHHHHHHHHHc--CCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCcc
Q 022103           32 IAIVTGANKGIGFALVKRLAEL--GLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALD  109 (302)
Q Consensus        32 ~vlItGas~gIG~ala~~l~~~--G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id  109 (302)
                      +++||||+|+||+++++.|+++  |++|++++|+.++.+...    .  ..+.++.+|++|.+++.++++       .+|
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~----~--~~~~~~~~D~~d~~~~~~~~~-------~~d   67 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALA----A--QGITVRQADYGDEAALTSALQ-------GVE   67 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHH----H--TTCEEEECCTTCHHHHHHHTT-------TCS
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhh----c--CCCeEEEcCCCCHHHHHHHHh-------CCC
Confidence            3899999999999999999998  999999999976654322    1  257889999999998887765       589


Q ss_pred             EEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhhc
Q 022103          110 ILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELS  189 (302)
Q Consensus       110 ~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~  189 (302)
                      +|||+||...               ..|+.++.++++++...     +.++||++||.... .   .             
T Consensus        68 ~vi~~a~~~~---------------~~~~~~~~~l~~a~~~~-----~~~~~v~~Ss~~~~-~---~-------------  110 (286)
T 2zcu_A           68 KLLLISSSEV---------------GQRAPQHRNVINAAKAA-----GVKFIAYTSLLHAD-T---S-------------  110 (286)
T ss_dssp             EEEECC-----------------------CHHHHHHHHHHHH-----TCCEEEEEEETTTT-T---C-------------
T ss_pred             EEEEeCCCCc---------------hHHHHHHHHHHHHHHHc-----CCCEEEEECCCCCC-C---C-------------
Confidence            9999999631               13666777777666442     46899999997764 1   0             


Q ss_pred             HHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCC---------
Q 022103          190 EEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ---------  260 (302)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~---------  260 (302)
                                               |   ..|+.+|.+.|.+++.       .|++++.|.||++.+++..         
T Consensus       111 -------------------------~---~~y~~sK~~~e~~~~~-------~~~~~~ilrp~~~~~~~~~~~~~~~~~~  155 (286)
T 2zcu_A          111 -------------------------P---LGLADEHIETEKMLAD-------SGIVYTLLRNGWYSENYLASAPAALEHG  155 (286)
T ss_dssp             -------------------------C---STTHHHHHHHHHHHHH-------HCSEEEEEEECCBHHHHHTTHHHHHHHT
T ss_pred             -------------------------c---chhHHHHHHHHHHHHH-------cCCCeEEEeChHHhhhhHHHhHHhhcCC
Confidence                                     1   3699999999998863       4799999999987664321         


Q ss_pred             ---------CCCCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCc
Q 022103          261 ---------GQGSHTADEAADVGARLLLLHPQQLPTAKFYIGLDP  296 (302)
Q Consensus       261 ---------~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  296 (302)
                               ......++++|..++.++..+ .  ..|..|...++
T Consensus       156 ~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~-~--~~g~~~~i~~~  197 (286)
T 2zcu_A          156 VFIGAAGDGKIASATRADYAAAAARVISEA-G--HEGKVYELAGD  197 (286)
T ss_dssp             EEEESCTTCCBCCBCHHHHHHHHHHHHHSS-S--CTTCEEEECCS
T ss_pred             ceeccCCCCccccccHHHHHHHHHHHhcCC-C--CCCceEEEeCC
Confidence                     113368899999999998732 2  35777766665

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.68  E-value=7e-16  Score=139.62  Aligned_cols=191  Identities=15%  Similarity=0.081  Sum_probs=132.9

Q ss_pred             CcEEEEeCCCchHHHHHHHHHHHcC-CEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCc
Q 022103           30 ETIAIVTGANKGIGFALVKRLAELG-LTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAAL  108 (302)
Q Consensus        30 ~k~vlItGas~gIG~ala~~l~~~G-~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~i  108 (302)
                      .++++||||+|+||+++++.|+++| ++|++++|+.++...  +.+..  ..+.++.+|++|.+++.++++       .+
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~--~~l~~--~~~~~~~~D~~d~~~l~~~~~-------~~   73 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAA--KELRL--QGAEVVQGDQDDQVIMELALN-------GA   73 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHH--HHHHH--TTCEEEECCTTCHHHHHHHHT-------TC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHH--HHHHH--CCCEEEEecCCCHHHHHHHHh-------cC
Confidence            4789999999999999999999999 999999999765431  22322  257889999999999888776       58


Q ss_pred             cEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhh
Q 022103          109 DILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEEL  188 (302)
Q Consensus       109 d~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  188 (302)
                      |+|||++|.....           ....|+.+..++++++    .+. +.++||++|+.. ..+...             
T Consensus        74 d~vi~~a~~~~~~-----------~~~~~~~~~~~~~~aa----~~~-gv~~iv~~S~~~-~~~~~~-------------  123 (299)
T 2wm3_A           74 YATFIVTNYWESC-----------SQEQEVKQGKLLADLA----RRL-GLHYVVYSGLEN-IKKLTA-------------  123 (299)
T ss_dssp             SEEEECCCHHHHT-----------CHHHHHHHHHHHHHHH----HHH-TCSEEEECCCCC-HHHHTT-------------
T ss_pred             CEEEEeCCCCccc-----------cchHHHHHHHHHHHHH----HHc-CCCEEEEEcCcc-ccccCC-------------
Confidence            9999999853110           1234555555555544    443 468999965533 221100             


Q ss_pred             cHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCC-------
Q 022103          189 SEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG-------  261 (302)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~-------  261 (302)
                                              .  .....|..+|.+++.+++.       .|++++.|+||.+.+++...       
T Consensus       124 ------------------------~--~~~~~y~~sK~~~e~~~~~-------~gi~~~ilrp~~~~~~~~~~~~~~~~~  170 (299)
T 2wm3_A          124 ------------------------G--RLAAAHFDGKGEVEEYFRD-------IGVPMTSVRLPCYFENLLSHFLPQKAP  170 (299)
T ss_dssp             ------------------------T--SCCCHHHHHHHHHHHHHHH-------HTCCEEEEECCEEGGGGGTTTCCEECT
T ss_pred             ------------------------C--cccCchhhHHHHHHHHHHH-------CCCCEEEEeecHHhhhchhhcCCcccC
Confidence                                    0  0125699999999988764       37999999999988764321       


Q ss_pred             CC---------------CCCHHHHHHHHHHHhhcCCCCCCCcceeecCCc
Q 022103          262 QG---------------SHTADEAADVGARLLLLHPQQLPTAKFYIGLDP  296 (302)
Q Consensus       262 ~~---------------~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  296 (302)
                      .+               ...++++|..++.++.. +.. ..|+.|...++
T Consensus       171 ~g~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~-~~~-~~g~~~~~~g~  218 (299)
T 2wm3_A          171 DGKSYLLSLPTGDVPMDGMSVSDLGPVVLSLLKM-PEK-YVGQNIGLSTC  218 (299)
T ss_dssp             TSSSEEECCCCTTSCEEEECGGGHHHHHHHHHHS-HHH-HTTCEEECCSE
T ss_pred             CCCEEEEEecCCCCccceecHHHHHHHHHHHHcC-hhh-hCCeEEEeeec
Confidence            01               14679999999999863 222 25677776664

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.66  E-value=2.4e-15  Score=140.23  Aligned_cols=187  Identities=15%  Similarity=0.101  Sum_probs=130.1

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEee-CCCHHHHHHHHHHHHhhCCC
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLD-VSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~D-lt~~~~~~~~~~~~~~~~g~  107 (302)
                      ++++++||||+|+||+++++.|+++|++|++++|+.++..  .+.+.. ...+.++.+| ++|.+++.++++       .
T Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~--~~~l~~-~~~v~~v~~D~l~d~~~l~~~~~-------~   73 (352)
T 1xgk_A            4 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLI--AEELQA-IPNVTLFQGPLLNNVPLMDTLFE-------G   73 (352)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHH--HHHHHT-STTEEEEESCCTTCHHHHHHHHT-------T
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhh--HHHHhh-cCCcEEEECCccCCHHHHHHHHh-------c
Confidence            4678999999999999999999999999999999876542  123332 2367889999 999999888775       5


Q ss_pred             ccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCC-CCcEEEecCCCc-ccccccCcccccccch
Q 022103          108 LDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPS-KSRILNISSRLG-TLSKVRNPNIKSILED  185 (302)
Q Consensus       108 id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~-~~~iv~vsS~~~-~~~~~~~~~~~~~~~~  185 (302)
                      +|+||||++....              ..|..+ .++++++    .+. + .++||++||... ..+.            
T Consensus        74 ~d~Vi~~a~~~~~--------------~~~~~~-~~l~~aa----~~~-g~v~~~V~~SS~~~~~~~~------------  121 (352)
T 1xgk_A           74 AHLAFINTTSQAG--------------DEIAIG-KDLADAA----KRA-GTIQHYIYSSMPDHSLYGP------------  121 (352)
T ss_dssp             CSEEEECCCSTTS--------------CHHHHH-HHHHHHH----HHH-SCCSEEEEEECCCGGGTSS------------
T ss_pred             CCEEEEcCCCCCc--------------HHHHHH-HHHHHHH----HHc-CCccEEEEeCCccccccCC------------
Confidence            7999999975310              124444 4444444    333 3 579999999762 2111            


Q ss_pred             hhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCC----
Q 022103          186 EELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG----  261 (302)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~----  261 (302)
                                                    .....|..+|++.+.+++.       .|++++.|+||++.++....    
T Consensus       122 ------------------------------~~~~~y~~sK~~~E~~~~~-------~gi~~~ivrpg~~g~~~~~~~~~~  164 (352)
T 1xgk_A          122 ------------------------------WPAVPMWAPKFTVENYVRQ-------LGLPSTFVYAGIYNNNFTSLPYPL  164 (352)
T ss_dssp             ------------------------------CCCCTTTHHHHHHHHHHHT-------SSSCEEEEEECEEGGGCBSSSCSS
T ss_pred             ------------------------------CCCccHHHHHHHHHHHHHH-------cCCCEEEEecceecCCchhccccc
Confidence                                          1125699999999998875       27999999999875543211    


Q ss_pred             -------CC---------------CCCH-HHHHHHHHHHhhcCCCCCCCcceeecCC
Q 022103          262 -------QG---------------SHTA-DEAADVGARLLLLHPQQLPTAKFYIGLD  295 (302)
Q Consensus       262 -------~~---------------~~~~-~~~a~~~~~l~~~~~~~~~~G~~~~~~~  295 (302)
                             .+               .+.. +++|..++.++..++.. ..|..|...+
T Consensus       165 ~~~~~~~~g~~~~~~~~~~~~~~~~i~v~~Dva~ai~~~l~~~~~~-~~g~~~~l~~  220 (352)
T 1xgk_A          165 FQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQK-WNGHRIALTF  220 (352)
T ss_dssp             CBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHHH-HTTCEEEECS
T ss_pred             ccccccCCCceEEeeccCCCCceeeEecHHHHHHHHHHHHhCCchh-hCCeEEEEec
Confidence                   00               1456 89999999998643222 2455555444

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.65  E-value=7.8e-15  Score=135.62  Aligned_cols=188  Identities=12%  Similarity=0.075  Sum_probs=131.9

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecCh----hhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHh
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDV----ERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKS  103 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~----~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~  103 (302)
                      |+.++|+||||+|+||+++++.|+++|++|++++|+.    ++.+ ..+.+..  ..+.++.+|++|.+++.+++++.  
T Consensus         8 M~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~-~~~~l~~--~~v~~~~~Dl~d~~~l~~~~~~~--   82 (346)
T 3i6i_A            8 SPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAK-IFKALED--KGAIIVYGLINEQEAMEKILKEH--   82 (346)
T ss_dssp             ---CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHH-HHHHHHH--TTCEEEECCTTCHHHHHHHHHHT--
T ss_pred             CCCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHH-HHHHHHh--CCcEEEEeecCCHHHHHHHHhhC--
Confidence            4467899999999999999999999999999999976    3332 2233332  36889999999999999888753  


Q ss_pred             hCCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCccccccc
Q 022103          104 NFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSIL  183 (302)
Q Consensus       104 ~~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~  183 (302)
                         .+|+|||++|..                  |+.+..++++++...    +...+||+  |..+......        
T Consensus        83 ---~~d~Vi~~a~~~------------------n~~~~~~l~~aa~~~----g~v~~~v~--S~~g~~~~e~--------  127 (346)
T 3i6i_A           83 ---EIDIVVSTVGGE------------------SILDQIALVKAMKAV----GTIKRFLP--SEFGHDVNRA--------  127 (346)
T ss_dssp             ---TCCEEEECCCGG------------------GGGGHHHHHHHHHHH----CCCSEEEC--SCCSSCTTTC--------
T ss_pred             ---CCCEEEECCchh------------------hHHHHHHHHHHHHHc----CCceEEee--cccCCCCCcc--------
Confidence               689999999972                  777888888777553    12567765  3333211100        


Q ss_pred             chhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC-
Q 022103          184 EDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ-  262 (302)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~-  262 (302)
                                                   ...+....|..+|.+++.+.+.       .|++++.|+||.+...+.... 
T Consensus       128 -----------------------------~~~~p~~~y~~sK~~~e~~l~~-------~g~~~tivrpg~~~g~~~~~~~  171 (346)
T 3i6i_A          128 -----------------------------DPVEPGLNMYREKRRVRQLVEE-------SGIPFTYICCNSIASWPYYNNI  171 (346)
T ss_dssp             -----------------------------CCCTTHHHHHHHHHHHHHHHHH-------TTCCBEEEECCEESSCCCSCC-
T ss_pred             -----------------------------CcCCCcchHHHHHHHHHHHHHH-------cCCCEEEEEecccccccCcccc
Confidence                                         0112246799999998887764       579999999998877553221 


Q ss_pred             ----------------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeec
Q 022103          263 ----------------------GSHTADEAADVGARLLLLHPQQLPTAKFYIG  293 (302)
Q Consensus       263 ----------------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~  293 (302)
                                            .....+++|..++.++.. + ...++.+++.
T Consensus       172 ~~~~~~~~~~~~~~~g~g~~~~~~i~~~Dva~~~~~~l~~-~-~~~~~~~~i~  222 (346)
T 3i6i_A          172 HPSEVLPPTDFFQIYGDGNVKAYFVAGTDIGKFTMKTVDD-V-RTLNKSVHFR  222 (346)
T ss_dssp             ----CCCCSSCEEEETTSCCCEEEECHHHHHHHHHHHTTC-G-GGTTEEEECC
T ss_pred             ccccccCCCceEEEccCCCceEEecCHHHHHHHHHHHHhC-c-cccCeEEEEe
Confidence                                  116689999999999873 3 2234444444

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=99.64  E-value=8.1e-15  Score=131.50  Aligned_cols=186  Identities=10%  Similarity=-0.045  Sum_probs=127.8

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCccE
Q 022103           31 TIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDI  110 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id~  110 (302)
                      ++++|||+ |+||.+++++|.++|++|++++|+..+.+....      ..+.++.+|++|.+            +..+|+
T Consensus         6 ~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~------~~~~~~~~D~~d~~------------~~~~d~   66 (286)
T 3ius_A            6 GTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA------SGAEPLLWPGEEPS------------LDGVTH   66 (286)
T ss_dssp             CEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH------TTEEEEESSSSCCC------------CTTCCE
T ss_pred             CcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh------CCCeEEEecccccc------------cCCCCE
Confidence            67999998 999999999999999999999999877654332      36889999999933            357999


Q ss_pred             EEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcC-CCCCcEEEecCCCcccccccCcccccccchhhhc
Q 022103          111 LVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRS-PSKSRILNISSRLGTLSKVRNPNIKSILEDEELS  189 (302)
Q Consensus       111 lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~-~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~  189 (302)
                      |||+|+.....    ..                ..+.++..+.+. .+.++||++||...+......+            
T Consensus        67 vi~~a~~~~~~----~~----------------~~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~~~~------------  114 (286)
T 3ius_A           67 LLISTAPDSGG----DP----------------VLAALGDQIAARAAQFRWVGYLSTTAVYGDHDGAW------------  114 (286)
T ss_dssp             EEECCCCBTTB----CH----------------HHHHHHHHHHHTGGGCSEEEEEEEGGGGCCCTTCE------------
T ss_pred             EEECCCccccc----cH----------------HHHHHHHHHHhhcCCceEEEEeecceecCCCCCCC------------
Confidence            99999975321    11                012333333331 1468999999976542211100            


Q ss_pred             HHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC-------
Q 022103          190 EEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ-------  262 (302)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~-------  262 (302)
                                         ..+...+.+...|+.+|.+.|.+++.+      .|++++.+.|+.+..+.....       
T Consensus       115 -------------------~~E~~~~~p~~~Y~~sK~~~E~~~~~~------~~~~~~ilRp~~v~G~~~~~~~~~~~~~  169 (286)
T 3ius_A          115 -------------------VDETTPLTPTAARGRWRVMAEQQWQAV------PNLPLHVFRLAGIYGPGRGPFSKLGKGG  169 (286)
T ss_dssp             -------------------ECTTSCCCCCSHHHHHHHHHHHHHHHS------TTCCEEEEEECEEEBTTBSSSTTSSSSC
T ss_pred             -------------------cCCCCCCCCCCHHHHHHHHHHHHHHhh------cCCCEEEEeccceECCCchHHHHHhcCC
Confidence                               011112233468999999999998876      589999999999987643221       


Q ss_pred             -----------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCc
Q 022103          263 -----------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDP  296 (302)
Q Consensus       263 -----------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  296 (302)
                                 ..+..+++|..++.++..+.    .|..|...++
T Consensus       170 ~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~----~g~~~~i~~~  210 (286)
T 3ius_A          170 IRRIIKPGQVFSRIHVEDIAQVLAASMARPD----PGAVYNVCDD  210 (286)
T ss_dssp             CCEEECTTCCBCEEEHHHHHHHHHHHHHSCC----TTCEEEECCS
T ss_pred             ccccCCCCcccceEEHHHHHHHHHHHHhCCC----CCCEEEEeCC
Confidence                       11456999999999987432    4555555443

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.60  E-value=4.6e-14  Score=127.69  Aligned_cols=172  Identities=13%  Similarity=0.186  Sum_probs=118.8

Q ss_pred             CcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecCh-------hhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHH
Q 022103           30 ETIAIVTGANKGIGFALVKRLAELGLTVILTARDV-------ERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFK  102 (302)
Q Consensus        30 ~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~-------~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~  102 (302)
                      +++++||||+|+||++++++|+++|++|++++|+.       ++.+.. +.+..  ..+.++.+|++|.+++.++++   
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~-~~l~~--~~v~~v~~D~~d~~~l~~~~~---   75 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELI-DNYQS--LGVILLEGDINDHETLVKAIK---   75 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHH-HHHHH--TTCEEEECCTTCHHHHHHHHT---
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHH-HHHHh--CCCEEEEeCCCCHHHHHHHHh---
Confidence            46799999999999999999999999999999986       444332 33333  257889999999999887776   


Q ss_pred             hhCCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccc
Q 022103          103 SNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSI  182 (302)
Q Consensus       103 ~~~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~  182 (302)
                          .+|+|||++|...                  +.+..++++++    .+.+..++||  .|..+......       
T Consensus        76 ----~~d~vi~~a~~~~------------------~~~~~~l~~aa----~~~g~v~~~v--~S~~g~~~~~~-------  120 (307)
T 2gas_A           76 ----QVDIVICAAGRLL------------------IEDQVKIIKAI----KEAGNVKKFF--PSEFGLDVDRH-------  120 (307)
T ss_dssp             ----TCSEEEECSSSSC------------------GGGHHHHHHHH----HHHCCCSEEE--CSCCSSCTTSC-------
T ss_pred             ----CCCEEEECCcccc------------------cccHHHHHHHH----HhcCCceEEe--ecccccCcccc-------
Confidence                5899999999742                  23344455544    3331257777  34433211100       


Q ss_pred             cchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC
Q 022103          183 LEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ  262 (302)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~  262 (302)
                                                   ....+....| .+|.+++.+.+.       .|++++.|+||++.+++....
T Consensus       121 -----------------------------~~~~p~~~~y-~sK~~~e~~~~~-------~~i~~~~lrp~~~~~~~~~~~  163 (307)
T 2gas_A          121 -----------------------------DAVEPVRQVF-EEKASIRRVIEA-------EGVPYTYLCCHAFTGYFLRNL  163 (307)
T ss_dssp             -----------------------------CCCTTHHHHH-HHHHHHHHHHHH-------HTCCBEEEECCEETTTTGGGT
T ss_pred             -----------------------------cCCCcchhHH-HHHHHHHHHHHH-------cCCCeEEEEcceeeccccccc
Confidence                                         0001113568 999999987753       378999999998887542110


Q ss_pred             -----------------------CCCCHHHHHHHHHHHhh
Q 022103          263 -----------------------GSHTADEAADVGARLLL  279 (302)
Q Consensus       263 -----------------------~~~~~~~~a~~~~~l~~  279 (302)
                                             ....++++|..++.++.
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~  203 (307)
T 2gas_A          164 AQLDATDPPRDKVVILGDGNVKGAYVTEADVGTFTIRAAN  203 (307)
T ss_dssp             TCTTCSSCCSSEEEEETTSCSEEEEECHHHHHHHHHHHHT
T ss_pred             cccccccCCCCeEEEecCCCcceEEeeHHHHHHHHHHHHc
Confidence                                   01578999999999986

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.60  E-value=2.3e-15  Score=135.40  Aligned_cols=178  Identities=16%  Similarity=0.102  Sum_probs=122.5

Q ss_pred             EEEEeCCCchHHHHHHHHHHHc-CCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCccE
Q 022103           32 IAIVTGANKGIGFALVKRLAEL-GLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDI  110 (302)
Q Consensus        32 ~vlItGas~gIG~ala~~l~~~-G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id~  110 (302)
                      +++||||+|+||+++++.|.+. |++|++++|+.++...    +.  ...+.++.+|++|.+++.++++       .+|+
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~----~~--~~~v~~~~~D~~d~~~l~~~~~-------~~d~   68 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPD----DW--RGKVSVRQLDYFNQESMVEAFK-------GMDT   68 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCG----GG--BTTBEEEECCTTCHHHHHHHTT-------TCSE
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHH----hh--hCCCEEEEcCCCCHHHHHHHHh-------CCCE
Confidence            4899999999999999999998 9999999999876432    11  2368899999999998887775       6899


Q ss_pred             EEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhhcH
Q 022103          111 LVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSE  190 (302)
Q Consensus       111 lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~  190 (302)
                      |||+||.....             ..|+.++.++++++    ++. +.++||++||......                  
T Consensus        69 vi~~a~~~~~~-------------~~~~~~~~~l~~aa----~~~-gv~~iv~~Ss~~~~~~------------------  112 (289)
T 3e48_A           69 VVFIPSIIHPS-------------FKRIPEVENLVYAA----KQS-GVAHIIFIGYYADQHN------------------  112 (289)
T ss_dssp             EEECCCCCCSH-------------HHHHHHHHHHHHHH----HHT-TCCEEEEEEESCCSTT------------------
T ss_pred             EEEeCCCCccc-------------hhhHHHHHHHHHHH----HHc-CCCEEEEEcccCCCCC------------------
Confidence            99999975321             12555555555544    444 4689999999543211                  


Q ss_pred             HHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCC----------
Q 022103          191 EQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ----------  260 (302)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~----------  260 (302)
                                                  ..|..++...  ++.   ..+...|++++.|.||.+.+++..          
T Consensus       113 ----------------------------~~~~~~~~~~--~~e---~~~~~~g~~~~ilrp~~~~~~~~~~~~~~~~~~~  159 (289)
T 3e48_A          113 ----------------------------NPFHMSPYFG--YAS---RLLSTSGIDYTYVRMAMYMDPLKPYLPELMNMHK  159 (289)
T ss_dssp             ----------------------------CCSTTHHHHH--HHH---HHHHHHCCEEEEEEECEESTTHHHHHHHHHHHTE
T ss_pred             ----------------------------CCCccchhHH--HHH---HHHHHcCCCEEEEeccccccccHHHHHHHHHCCC
Confidence                                        1133333211  122   222236899999999999886521          


Q ss_pred             ---CCC-----CCCHHHHHHHHHHHhhcCCCCCCCcceeecC
Q 022103          261 ---GQG-----SHTADEAADVGARLLLLHPQQLPTAKFYIGL  294 (302)
Q Consensus       261 ---~~~-----~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~  294 (302)
                         ..+     ...++++|..++.++.. +..  .|..|...
T Consensus       160 ~~~~~g~~~~~~i~~~Dva~~~~~~l~~-~~~--~g~~~~~~  198 (289)
T 3e48_A          160 LIYPAGDGRINYITRNDIARGVIAIIKN-PDT--WGKRYLLS  198 (289)
T ss_dssp             ECCCCTTCEEEEECHHHHHHHHHHHHHC-GGG--TTCEEEEC
T ss_pred             EecCCCCceeeeEEHHHHHHHHHHHHcC-CCc--CCceEEeC
Confidence               011     26789999999999873 332  26666655

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.60  E-value=4e-15  Score=138.75  Aligned_cols=171  Identities=20%  Similarity=0.092  Sum_probs=130.5

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCccE
Q 022103           32 IAIVTGANKGIGFALVKRLAELGL-TVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDI  110 (302)
Q Consensus        32 ~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id~  110 (302)
                      +|+||||+|+||++++++|+++|+ +|+.++|+                         +|.+++.++++       .+|+
T Consensus         2 ~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~-------------------------~d~~~l~~~~~-------~~d~   49 (369)
T 3st7_A            2 NIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ-------------------------TKEEELESALL-------KADF   49 (369)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT-------------------------CCHHHHHHHHH-------HCSE
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC-------------------------CCHHHHHHHhc-------cCCE
Confidence            599999999999999999999998 77776665                         67777877776       4899


Q ss_pred             EEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhhcH
Q 022103          111 LVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSE  190 (302)
Q Consensus       111 lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~  190 (302)
                      |||+||....       +.++..+++|+.++.++++++..    .+...+||++||.....                   
T Consensus        50 Vih~a~~~~~-------~~~~~~~~~n~~~~~~l~~a~~~----~~~~~~~v~~Ss~~~~~-------------------   99 (369)
T 3st7_A           50 IVHLAGVNRP-------EHDKEFSLGNVSYLDHVLDILTR----NTKKPAILLSSSIQATQ-------------------   99 (369)
T ss_dssp             EEECCCSBCT-------TCSTTCSSSCCBHHHHHHHHHTT----CSSCCEEEEEEEGGGGS-------------------
T ss_pred             EEECCcCCCC-------CCHHHHHHHHHHHHHHHHHHHHH----hCCCCeEEEeCchhhcC-------------------
Confidence            9999997542       23455688999999999988754    21224899999977642                   


Q ss_pred             HHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC--------
Q 022103          191 EQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ--------  262 (302)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~--------  262 (302)
                                                 ...|+.+|.+.|.+++.++++   .|+++..+.|+.+..+.....        
T Consensus       100 ---------------------------~~~Y~~sK~~~E~~~~~~~~~---~g~~~~i~R~~~v~G~~~~~~~~~~~~~~  149 (369)
T 3st7_A          100 ---------------------------DNPYGESKLQGEQLLREYAEE---YGNTVYIYRWPNLFGKWCKPNYNSVIATF  149 (369)
T ss_dssp             ---------------------------CSHHHHHHHHHHHHHHHHHHH---HCCCEEEEEECEEECTTCCTTSSCHHHHH
T ss_pred             ---------------------------CCCchHHHHHHHHHHHHHHHH---hCCCEEEEECCceeCCCCCCCcchHHHHH
Confidence                                       156999999999999999987   478999999999977643210        


Q ss_pred             -------------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCc
Q 022103          263 -------------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDP  296 (302)
Q Consensus       263 -------------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  296 (302)
                                         .....+++|..++.++..+. . ..|.+|...++
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~-~-~~~~~~~i~~~  200 (369)
T 3st7_A          150 CYKIARNEEIQVNDRNVELTLNYVDDIVAEIKRAIEGTP-T-IENGVPTVPNV  200 (369)
T ss_dssp             HHHHHTTCCCCCSCTTCEEEEEEHHHHHHHHHHHHHTCC-C-EETTEECCSCC
T ss_pred             HHHHHcCCCeEecCCCeEEEEEEHHHHHHHHHHHHhCCc-c-cCCceEEeCCC
Confidence                               01457999999999987432 2 22566666554

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.56  E-value=1.9e-14  Score=140.63  Aligned_cols=200  Identities=16%  Similarity=0.071  Sum_probs=137.7

Q ss_pred             CcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCcc
Q 022103           30 ETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALD  109 (302)
Q Consensus        30 ~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id  109 (302)
                      +++||||||+|+||.++++.|+++|++|++++|+..+.              ..+.+|+.+..         ...+..+|
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~--------------~~v~~d~~~~~---------~~~l~~~D  203 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKP--------------GKRFWDPLNPA---------SDLLDGAD  203 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCT--------------TCEECCTTSCC---------TTTTTTCS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCc--------------cceeecccchh---------HHhcCCCC
Confidence            57899999999999999999999999999999987542              12567776431         23345799


Q ss_pred             EEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhhc
Q 022103          110 ILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELS  189 (302)
Q Consensus       110 ~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~  189 (302)
                      +|||+||.....  ..+.+..+..+++|+.++.++++++..   +. +.++||++||...+......             
T Consensus       204 ~Vih~A~~~~~~--~~~~~~~~~~~~~Nv~gt~~ll~a~a~---~~-~~~r~V~~SS~~vyg~~~~~-------------  264 (516)
T 3oh8_A          204 VLVHLAGEPIFG--RFNDSHKEAIRESRVLPTKFLAELVAE---ST-QCTTMISASAVGFYGHDRGD-------------  264 (516)
T ss_dssp             EEEECCCC-------CCGGGHHHHHHHTHHHHHHHHHHHHH---CS-SCCEEEEEEEGGGGCSEEEE-------------
T ss_pred             EEEECCCCcccc--ccchhHHHHHHHHHHHHHHHHHHHHHh---cC-CCCEEEEeCcceEecCCCCC-------------
Confidence            999999975332  345677888999999999999997432   22 46799999997654311110             


Q ss_pred             HHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCC---------
Q 022103          190 EEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ---------  260 (302)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~---------  260 (302)
                                        ...+...|.+...|+.+|...+.+...+.    ..|++++.|.||.+.++...         
T Consensus       265 ------------------~~~~E~~~~~~~~y~~~~~~~E~~~~~~~----~~gi~~~ilRp~~v~Gp~~~~~~~~~~~~  322 (516)
T 3oh8_A          265 ------------------EILTEESESGDDFLAEVCRDWEHATAPAS----DAGKRVAFIRTGVALSGRGGMLPLLKTLF  322 (516)
T ss_dssp             ------------------EEECTTSCCCSSHHHHHHHHHHHTTHHHH----HTTCEEEEEEECEEEBTTBSHHHHHHHTT
T ss_pred             ------------------CccCCCCCCCcChHHHHHHHHHHHHHHHH----hCCCCEEEEEeeEEECCCCChHHHHHHHH
Confidence                              00011112234668888988887655432    36899999999999886411         


Q ss_pred             --C----C-------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCc
Q 022103          261 --G----Q-------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDP  296 (302)
Q Consensus       261 --~----~-------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  296 (302)
                        .    .       ..+..+++|..++.++..+.   ..|.+.+..+.
T Consensus       323 ~~g~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~---~~g~~ni~~~~  368 (516)
T 3oh8_A          323 STGLGGKFGDGTSWFSWIAIDDLTDIYYRAIVDAQ---ISGPINAVAPN  368 (516)
T ss_dssp             C---CCCCTTSCCEECEEEHHHHHHHHHHHHHCTT---CCEEEEESCSC
T ss_pred             HhCCCcccCCCCceEceEeHHHHHHHHHHHHhCcc---cCCcEEEECCC
Confidence              0    0       12567999999999987332   45766666554

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.52  E-value=2.6e-13  Score=123.01  Aligned_cols=178  Identities=12%  Similarity=0.125  Sum_probs=120.0

Q ss_pred             CcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecCh-----hhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhh
Q 022103           30 ETIAIVTGANKGIGFALVKRLAELGLTVILTARDV-----ERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSN  104 (302)
Q Consensus        30 ~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~-----~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~  104 (302)
                      .++++||||+|+||++++++|+++|++|++++|+.     ++.+. .+.+.  ...+.++.+|++|.+++.++++     
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~-~~~~~--~~~~~~~~~D~~d~~~l~~~~~-----   75 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQM-LLYFK--QLGAKLIEASLDDHQRLVDALK-----   75 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHH-HHHHH--TTTCEEECCCSSCHHHHHHHHT-----
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHH-HHHHH--hCCeEEEeCCCCCHHHHHHHHh-----
Confidence            36799999999999999999999999999999984     33322 22332  2357889999999999888776     


Q ss_pred             CCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccc
Q 022103          105 FAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILE  184 (302)
Q Consensus       105 ~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~  184 (302)
                        .+|+|||++|.....              .|+.+..++++++.    +.+..++||+  |..+.....          
T Consensus        76 --~~d~vi~~a~~~~~~--------------~~~~~~~~l~~aa~----~~g~v~~~v~--S~~g~~~~~----------  123 (313)
T 1qyd_A           76 --QVDVVISALAGGVLS--------------HHILEQLKLVEAIK----EAGNIKRFLP--SEFGMDPDI----------  123 (313)
T ss_dssp             --TCSEEEECCCCSSSS--------------TTTTTHHHHHHHHH----HSCCCSEEEC--SCCSSCTTS----------
T ss_pred             --CCCEEEECCccccch--------------hhHHHHHHHHHHHH----hcCCCceEEe--cCCcCCccc----------
Confidence              589999999975321              25666666666553    3312578874  433321100          


Q ss_pred             hhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCC----C
Q 022103          185 DEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMT----Q  260 (302)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~----~  260 (302)
                                              + ..+..+....| .+|.+++.+.+    +   .|++++.|.||++.+++.    .
T Consensus       124 ------------------------~-~~~~~p~~~~y-~sK~~~e~~~~----~---~g~~~~ilrp~~~~~~~~~~~~~  170 (313)
T 1qyd_A          124 ------------------------M-EHALQPGSITF-IDKRKVRRAIE----A---ASIPYTYVSSNMFAGYFAGSLAQ  170 (313)
T ss_dssp             ------------------------C-CCCCSSTTHHH-HHHHHHHHHHH----H---TTCCBCEEECCEEHHHHTTTSSC
T ss_pred             ------------------------c-ccCCCCCcchH-HHHHHHHHHHH----h---cCCCeEEEEeceecccccccccc
Confidence                                    0 00001113468 99999988775    2   478888899987754211    1


Q ss_pred             -------CC-------------CCCCHHHHHHHHHHHhhc
Q 022103          261 -------GQ-------------GSHTADEAADVGARLLLL  280 (302)
Q Consensus       261 -------~~-------------~~~~~~~~a~~~~~l~~~  280 (302)
                             ..             .....+++|..++.++..
T Consensus       171 ~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~  210 (313)
T 1qyd_A          171 LDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDD  210 (313)
T ss_dssp             TTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTC
T ss_pred             ccccccCCCCeEEEeCCCCceEEEEEHHHHHHHHHHHHhC
Confidence                   00             115689999999999863

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=99.51  E-value=1.2e-13  Score=127.83  Aligned_cols=118  Identities=18%  Similarity=0.187  Sum_probs=93.0

Q ss_pred             CcEEEEeCCCchHHHHHHHHHHHcC-----CEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhh
Q 022103           30 ETIAIVTGANKGIGFALVKRLAELG-----LTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSN  104 (302)
Q Consensus        30 ~k~vlItGas~gIG~ala~~l~~~G-----~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~  104 (302)
                      +++++||||+|+||.+++++|+++|     ++|++++|+.....       ....++.++.+|++|.+++.++++.+   
T Consensus         1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~-------~~~~~~~~~~~Dl~d~~~~~~~~~~~---   70 (364)
T 2v6g_A            1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW-------HEDNPINYVQCDISDPDDSQAKLSPL---   70 (364)
T ss_dssp             CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC-------CCSSCCEEEECCTTSHHHHHHHHTTC---
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc-------cccCceEEEEeecCCHHHHHHHHhcC---
Confidence            4689999999999999999999999     99999999875432       12346789999999999888777632   


Q ss_pred             CCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEE-------EecCCCc
Q 022103          105 FAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRIL-------NISSRLG  169 (302)
Q Consensus       105 ~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv-------~vsS~~~  169 (302)
                       +.+|+|||+||...        ++++..+++|+.++.++++++.+...   +..++|       ++||...
T Consensus        71 -~~~d~vih~a~~~~--------~~~~~~~~~n~~~~~~l~~a~~~~~~---~~~~~v~~~g~~i~~Ss~~v  130 (364)
T 2v6g_A           71 -TDVTHVFYVTWANR--------STEQENCEANSKMFRNVLDAVIPNCP---NLKHISLQTGRKHYMGPFES  130 (364)
T ss_dssp             -TTCCEEEECCCCCC--------SSHHHHHHHHHHHHHHHHHHHTTTCT---TCCEEEEECCTHHHHCCGGG
T ss_pred             -CCCCEEEECCCCCc--------chHHHHHHHhHHHHHHHHHHHHHhcc---ccceEEeccCceEEEechhh
Confidence             24999999999752        24577899999999999999976521   246776       6777644

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.49  E-value=3.8e-13  Score=121.70  Aligned_cols=173  Identities=14%  Similarity=0.152  Sum_probs=114.5

Q ss_pred             CcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhh-----HHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhh
Q 022103           30 ETIAIVTGANKGIGFALVKRLAELGLTVILTARDVER-----GQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSN  104 (302)
Q Consensus        30 ~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~-----~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~  104 (302)
                      .++++||||+|+||+++++.|+++|++|++++|+...     .....+.+..  ..+.++.+|++|.+++.++++     
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~--~~v~~v~~D~~d~~~l~~~~~-----   76 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKA--SGANIVHGSIDDHASLVEAVK-----   76 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHT--TTCEEECCCTTCHHHHHHHHH-----
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHh--CCCEEEEeccCCHHHHHHHHc-----
Confidence            3679999999999999999999999999999998432     1222233332  357889999999999988876     


Q ss_pred             CCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccc
Q 022103          105 FAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILE  184 (302)
Q Consensus       105 ~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~  184 (302)
                        .+|+|||++|...                  +.+..++++++    .+.+..++||+  |..+......         
T Consensus        77 --~~d~vi~~a~~~~------------------~~~~~~l~~aa----~~~g~v~~~v~--S~~g~~~~~~---------  121 (308)
T 1qyc_A           77 --NVDVVISTVGSLQ------------------IESQVNIIKAI----KEVGTVKRFFP--SEFGNDVDNV---------  121 (308)
T ss_dssp             --TCSEEEECCCGGG------------------SGGGHHHHHHH----HHHCCCSEEEC--SCCSSCTTSC---------
T ss_pred             --CCCEEEECCcchh------------------hhhHHHHHHHH----HhcCCCceEee--cccccCcccc---------
Confidence              5899999998631                  22334444444    33312577773  4333211000         


Q ss_pred             hhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC--
Q 022103          185 DEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ--  262 (302)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~--  262 (302)
                                                 .+..+....| .+|.+++.+.+.       .|++++.|.||++.+++....  
T Consensus       122 ---------------------------~~~~p~~~~y-~sK~~~e~~~~~-------~~~~~~~~r~~~~~~~~~~~~~~  166 (308)
T 1qyc_A          122 ---------------------------HAVEPAKSVF-EVKAKVRRAIEA-------EGIPYTYVSSNCFAGYFLRSLAQ  166 (308)
T ss_dssp             ---------------------------CCCTTHHHHH-HHHHHHHHHHHH-------HTCCBEEEECCEEHHHHTTTTTC
T ss_pred             ---------------------------ccCCcchhHH-HHHHHHHHHHHh-------cCCCeEEEEeceecccccccccc
Confidence                                       0001112468 999999888763       368888889987754321100  


Q ss_pred             ---------------------CCCCHHHHHHHHHHHhh
Q 022103          263 ---------------------GSHTADEAADVGARLLL  279 (302)
Q Consensus       263 ---------------------~~~~~~~~a~~~~~l~~  279 (302)
                                           ....++++|..++.++.
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~  204 (308)
T 1qyc_A          167 AGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVD  204 (308)
T ss_dssp             TTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSS
T ss_pred             ccccCCCCCceEEecCCCceEEEecHHHHHHHHHHHHh
Confidence                                 11567999999999886

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.49  E-value=9.8e-14  Score=126.53  Aligned_cols=172  Identities=11%  Similarity=0.118  Sum_probs=114.4

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCccE
Q 022103           31 TIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDI  110 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id~  110 (302)
                      ++++||||+|+||++++++|+++|++|++++|+.+......+++..  ..+.++.+|++|.+++.++++       .+|+
T Consensus        12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~--~~v~~v~~Dl~d~~~l~~a~~-------~~d~   82 (318)
T 2r6j_A           12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQS--LGAIIVKGELDEHEKLVELMK-------KVDV   82 (318)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHH--TTCEEEECCTTCHHHHHHHHT-------TCSE
T ss_pred             CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhc--CCCEEEEecCCCHHHHHHHHc-------CCCE
Confidence            5799999999999999999999999999999987522222333333  257889999999999888776       5899


Q ss_pred             EEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhhcH
Q 022103          111 LVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSE  190 (302)
Q Consensus       111 lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~  190 (302)
                      |||+++...                  +.+..++++++    .+.+..++||+  |..+.......              
T Consensus        83 vi~~a~~~~------------------~~~~~~l~~aa----~~~g~v~~~v~--S~~g~~~~~~~--------------  124 (318)
T 2r6j_A           83 VISALAFPQ------------------ILDQFKILEAI----KVAGNIKRFLP--SDFGVEEDRIN--------------  124 (318)
T ss_dssp             EEECCCGGG------------------STTHHHHHHHH----HHHCCCCEEEC--SCCSSCTTTCC--------------
T ss_pred             EEECCchhh------------------hHHHHHHHHHH----HhcCCCCEEEe--eccccCccccc--------------
Confidence            999998631                  22334444444    33312567774  43332110000              


Q ss_pred             HHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCC--------CC-
Q 022103          191 EQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMT--------QG-  261 (302)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~--------~~-  261 (302)
                                            ...+....| .+|.+++.+.+.       .|++++.|.||++..++.        .. 
T Consensus       125 ----------------------~~~p~~~~y-~sK~~~e~~~~~-------~~~~~~~lr~~~~~~~~~~~~~~~~~~~~  174 (318)
T 2r6j_A          125 ----------------------ALPPFEALI-ERKRMIRRAIEE-------ANIPYTYVSANCFASYFINYLLRPYDPKD  174 (318)
T ss_dssp             ----------------------CCHHHHHHH-HHHHHHHHHHHH-------TTCCBEEEECCEEHHHHHHHHHCTTCCCS
T ss_pred             ----------------------CCCCcchhH-HHHHHHHHHHHh-------cCCCeEEEEcceehhhhhhhhccccCCCC
Confidence                                  000112458 999999887753       478888889987644210        10 


Q ss_pred             -----------CCCCCHHHHHHHHHHHhh
Q 022103          262 -----------QGSHTADEAADVGARLLL  279 (302)
Q Consensus       262 -----------~~~~~~~~~a~~~~~l~~  279 (302)
                                 .....++++|..++.++.
T Consensus       175 ~~~~~~~~~~~~~~i~~~Dva~~~~~~l~  203 (318)
T 2r6j_A          175 EITVYGTGEAKFAMNYEQDIGLYTIKVAT  203 (318)
T ss_dssp             EEEEETTSCCEEEEECHHHHHHHHHHHTT
T ss_pred             ceEEecCCCceeeEeeHHHHHHHHHHHhc
Confidence                       012568999999999986

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.42  E-value=1.9e-12  Score=118.00  Aligned_cols=173  Identities=10%  Similarity=0.131  Sum_probs=115.4

Q ss_pred             CcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecCh-h----hHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhh
Q 022103           30 ETIAIVTGANKGIGFALVKRLAELGLTVILTARDV-E----RGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSN  104 (302)
Q Consensus        30 ~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~-~----~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~  104 (302)
                      .++++||||+|+||++++++|+++|++|++++|+. .    ......+.+..  ..+.++.+|++|.+++.++++     
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~--~~v~~v~~D~~d~~~l~~a~~-----   76 (321)
T 3c1o_A            4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRS--MGVTIIEGEMEEHEKMVSVLK-----   76 (321)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHH--TTCEEEECCTTCHHHHHHHHT-----
T ss_pred             ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhc--CCcEEEEecCCCHHHHHHHHc-----
Confidence            35799999999999999999999999999999986 1    22222233332  357899999999999888776     


Q ss_pred             CCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCC-CCcEEEecCCCcccccccCccccccc
Q 022103          105 FAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPS-KSRILNISSRLGTLSKVRNPNIKSIL  183 (302)
Q Consensus       105 ~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~-~~~iv~vsS~~~~~~~~~~~~~~~~~  183 (302)
                        .+|+|||++|...                  +.+..++++++    .+. + .++||  .|..+.......       
T Consensus        77 --~~d~vi~~a~~~~------------------~~~~~~l~~aa----~~~-g~v~~~v--~S~~g~~~~~~~-------  122 (321)
T 3c1o_A           77 --QVDIVISALPFPM------------------ISSQIHIINAI----KAA-GNIKRFL--PSDFGCEEDRIK-------  122 (321)
T ss_dssp             --TCSEEEECCCGGG------------------SGGGHHHHHHH----HHH-CCCCEEE--CSCCSSCGGGCC-------
T ss_pred             --CCCEEEECCCccc------------------hhhHHHHHHHH----HHh-CCccEEe--ccccccCccccc-------
Confidence              5899999999631                  33334444444    333 3 56777  344332110000       


Q ss_pred             chhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCC-----
Q 022103          184 EDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSM-----  258 (302)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~-----  258 (302)
                                                   ...+....| .+|.+++.+++.       .|++++.|.||++..++     
T Consensus       123 -----------------------------~~~p~~~~y-~sK~~~e~~~~~-------~~~~~~~lrp~~~~~~~~~~~~  165 (321)
T 3c1o_A          123 -----------------------------PLPPFESVL-EKKRIIRRAIEA-------AALPYTYVSANCFGAYFVNYLL  165 (321)
T ss_dssp             -----------------------------CCHHHHHHH-HHHHHHHHHHHH-------HTCCBEEEECCEEHHHHHHHHH
T ss_pred             -----------------------------cCCCcchHH-HHHHHHHHHHHH-------cCCCeEEEEeceeccccccccc
Confidence                                         000112469 999999988863       36788888898764421     


Q ss_pred             ------CCCC------------CCCCHHHHHHHHHHHhhc
Q 022103          259 ------TQGQ------------GSHTADEAADVGARLLLL  280 (302)
Q Consensus       259 ------~~~~------------~~~~~~~~a~~~~~l~~~  280 (302)
                            ....            ....++++|..++.++..
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~  205 (321)
T 3c1o_A          166 HPSPHPNRNDDIVIYGTGETKFVLNYEEDIAKYTIKVACD  205 (321)
T ss_dssp             CCCSSCCTTSCEEEETTSCCEEEEECHHHHHHHHHHHHHC
T ss_pred             cccccccccCceEEecCCCcceeEeeHHHHHHHHHHHHhC
Confidence                  0000            126789999999999873

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=99.30  E-value=1.1e-10  Score=105.28  Aligned_cols=197  Identities=14%  Similarity=0.063  Sum_probs=123.5

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCccEE
Q 022103           32 IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDIL  111 (302)
Q Consensus        32 ~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id~l  111 (302)
                      +||||||+|.||++++++|.++|++|+++.|++.+            ..   +..|     ++      ....+..+|.+
T Consensus         2 kILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~------------~~---~~~~-----~~------~~~~l~~~d~v   55 (298)
T 4b4o_A            2 RVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGP------------GR---ITWD-----EL------AASGLPSCDAA   55 (298)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCT------------TE---EEHH-----HH------HHHCCCSCSEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCc------------Ce---eecc-----hh------hHhhccCCCEE
Confidence            38999999999999999999999999999997632            11   1111     11      11234679999


Q ss_pred             EEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhhcH
Q 022103          112 VNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSE  190 (302)
Q Consensus       112 v~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~  190 (302)
                      ||.||.... .....+....+..+++|+.++.++++.+...  .. ...++|+.||...........             
T Consensus        56 ihla~~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~--~~-~~~~~i~~Ss~~vyg~~~~~~-------------  119 (298)
T 4b4o_A           56 VNLAGENILNPLRRWNETFQKEVLGSRLETTQLLAKAITKA--PQ-PPKAWVLVTGVAYYQPSLTAE-------------  119 (298)
T ss_dssp             EECCCCCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHC--SS-CCSEEEEEEEGGGSCCCSSCC-------------
T ss_pred             EEeccCcccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHh--CC-CceEEEEEeeeeeecCCCCCc-------------
Confidence            999986432 2344567777889999999998888776543  11 235577777765543221110             


Q ss_pred             HHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCC---------
Q 022103          191 EQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG---------  261 (302)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~---------  261 (302)
                                        ..+...+.....|+..+...+..     ......++++..+.||.|..+-...         
T Consensus       120 ------------------~~E~~p~~~~~~~~~~~~~~e~~-----~~~~~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~  176 (298)
T 4b4o_A          120 ------------------YDEDSPGGDFDFFSNLVTKWEAA-----ARLPGDSTRQVVVRSGVVLGRGGGAMGHMLLPFR  176 (298)
T ss_dssp             ------------------BCTTCCCSCSSHHHHHHHHHHHH-----HCCSSSSSEEEEEEECEEECTTSHHHHHHHHHHH
T ss_pred             ------------------ccccCCccccchhHHHHHHHHHH-----HHhhccCCceeeeeeeeEEcCCCCchhHHHHHHh
Confidence                              00111122223455555444432     2234578999999999988764110         


Q ss_pred             -------------CCCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCc
Q 022103          262 -------------QGSHTADEAADVGARLLLLHPQQLPTAKFYIGLDP  296 (302)
Q Consensus       262 -------------~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  296 (302)
                                   +..+..++++..+..++..+.   ..|.|.+.++.
T Consensus       177 ~~~~~~~g~g~~~~~~ihv~Dva~a~~~~~~~~~---~~g~yn~~~~~  221 (298)
T 4b4o_A          177 LGLGGPIGSGHQFFPWIHIGDLAGILTHALEANH---VHGVLNGVAPS  221 (298)
T ss_dssp             TTCCCCBTTSCSBCCEEEHHHHHHHHHHHHHCTT---CCEEEEESCSC
T ss_pred             cCCcceecccCceeecCcHHHHHHHHHHHHhCCC---CCCeEEEECCC
Confidence                         011557999999998887432   45755555444

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=99.29  E-value=1.3e-12  Score=118.35  Aligned_cols=109  Identities=19%  Similarity=0.190  Sum_probs=86.2

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      .++++|+++||||+||||+++++.|+++|++|++++|+.++.++..+++... ..+.++.+|+++.++++++++      
T Consensus       115 ~~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~-~~~~~~~~D~~~~~~~~~~~~------  187 (287)
T 1lu9_A          115 GSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKR-FKVNVTAAETADDASRAEAVK------  187 (287)
T ss_dssp             SCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH-HTCCCEEEECCSHHHHHHHTT------
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhc-CCcEEEEecCCCHHHHHHHHH------
Confidence            4578999999999999999999999999999999999998888888777542 246778899999998877665      


Q ss_pred             CCccEEEEcCCCCC-C-CCCCCCH-HHHHHHHHhhhhHHH
Q 022103          106 AALDILVNNAGVSF-N-DIYKNTV-EHAETVIRTNFYGAK  142 (302)
Q Consensus       106 g~id~lv~~aG~~~-~-~~~~~~~-e~~~~~~~vn~~~~~  142 (302)
                       .+|+||||+|... . ++.+.+. +.++.++++|+.+++
T Consensus       188 -~~DvlVn~ag~g~~~~~~~~~~~~~~~~~~~dvn~~~~~  226 (287)
T 1lu9_A          188 -GAHFVFTAGAIGLELLPQAAWQNESSIEIVADYNAQPPL  226 (287)
T ss_dssp             -TCSEEEECCCTTCCSBCHHHHTTCTTCCEEEECCCSSSC
T ss_pred             -hCCEEEECCCccccCCChhHcCchHHHHHHHHhhhhhhH
Confidence             4799999998532 2 2222333 555668888888776

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=99.10  E-value=1.7e-10  Score=106.23  Aligned_cols=170  Identities=15%  Similarity=0.082  Sum_probs=107.9

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHcCC-------EEEEEecCh--hhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHH
Q 022103           31 TIAIVTGANKGIGFALVKRLAELGL-------TVILTARDV--ERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWF  101 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~G~-------~V~l~~r~~--~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~  101 (302)
                      .+++||||+|.||.+++..|+++|+       +|+++++..  ++.......+.+..  +.+. .|+.+.+++.+.++  
T Consensus         5 mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~--~~~~-~di~~~~~~~~a~~--   79 (327)
T 1y7t_A            5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCA--FPLL-AGLEATDDPKVAFK--   79 (327)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTT--CTTE-EEEEEESCHHHHTT--
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhccc--cccc-CCeEeccChHHHhC--
Confidence            3699999999999999999999996       899999874  23333333443321  1122 56665544444333  


Q ss_pred             HhhCCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCccccc
Q 022103          102 KSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKS  181 (302)
Q Consensus       102 ~~~~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~  181 (302)
                           .+|+|||+||....+  .   +...+.+++|+.++..+++++...-  . ...+++++|+.......        
T Consensus        80 -----~~D~Vih~Ag~~~~~--~---~~~~~~~~~Nv~~t~~l~~a~~~~~--~-~~~~vvv~snp~~~~~~--------  138 (327)
T 1y7t_A           80 -----DADYALLVGAAPRKA--G---MERRDLLQVNGKIFTEQGRALAEVA--K-KDVKVLVVGNPANTNAL--------  138 (327)
T ss_dssp             -----TCSEEEECCCCCCCT--T---CCHHHHHHHHHHHHHHHHHHHHHHS--C-TTCEEEECSSSHHHHHH--------
T ss_pred             -----CCCEEEECCCcCCCC--C---CCHHHHHHHHHHHHHHHHHHHHhhc--C-CCeEEEEeCCchhhhHH--------
Confidence                 689999999986432  1   2345679999999999999987752  1 23577777764311000        


Q ss_pred             ccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcc
Q 022103          182 ILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFT  254 (302)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v  254 (302)
                                        ...  +     ..+.+++...|+.+|...+.+...+++.+   |+++..|+|..|
T Consensus       139 ------------------~~~--~-----~~~~~~p~~~yg~tkl~~er~~~~~a~~~---g~~~~~vr~~~V  183 (327)
T 1y7t_A          139 ------------------IAY--K-----NAPGLNPRNFTAMTRLDHNRAKAQLAKKT---GTGVDRIRRMTV  183 (327)
T ss_dssp             ------------------HHH--H-----TCTTSCGGGEEECCHHHHHHHHHHHHHHH---TCCGGGEECCEE
T ss_pred             ------------------HHH--H-----HcCCCChhheeccchHHHHHHHHHHHHHh---CcChhheeeeEE
Confidence                              000  0     00011223569999999999999998874   444444444443

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=98.90  E-value=4.2e-09  Score=91.97  Aligned_cols=79  Identities=19%  Similarity=0.171  Sum_probs=61.3

Q ss_pred             cccCcEEEEeCC----------------CchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCC
Q 022103           27 WSKETIAIVTGA----------------NKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSD   90 (302)
Q Consensus        27 ~~~~k~vlItGa----------------s~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~   90 (302)
                      +++||+||||||                +||||.++|++|+++|++|+++++... ++     . ..  .  ...+|+++
T Consensus         5 ~l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~-l~-----~-~~--g--~~~~dv~~   73 (226)
T 1u7z_A            5 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS-LP-----T-PP--F--VKRVDVMT   73 (226)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC-CC-----C-CT--T--EEEEECCS
T ss_pred             CCCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcc-cc-----c-CC--C--CeEEccCc
Confidence            478999999999                599999999999999999999988652 11     0 11  1  23567877


Q ss_pred             HHHHHHHHHHHHhhCCCccEEEEcCCCCC
Q 022103           91 PSSIEAFVSWFKSNFAALDILVNNAGVSF  119 (302)
Q Consensus        91 ~~~~~~~~~~~~~~~g~id~lv~~aG~~~  119 (302)
                      .++   +++.+.+.++.+|++|+|||+..
T Consensus        74 ~~~---~~~~v~~~~~~~Dili~~Aav~d   99 (226)
T 1u7z_A           74 ALE---MEAAVNASVQQQNIFIGCAAVAD   99 (226)
T ss_dssp             HHH---HHHHHHHHGGGCSEEEECCBCCS
T ss_pred             HHH---HHHHHHHhcCCCCEEEECCcccC
Confidence            554   55666777889999999999864

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=98.81  E-value=2.9e-08  Score=76.39  Aligned_cols=74  Identities=19%  Similarity=0.201  Sum_probs=62.1

Q ss_pred             CcEEEEeCCCchHHHHHHHHHHHcC-CEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCc
Q 022103           30 ETIAIVTGANKGIGFALVKRLAELG-LTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAAL  108 (302)
Q Consensus        30 ~k~vlItGas~gIG~ala~~l~~~G-~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~i  108 (302)
                      +++++|+|+ |++|.++++.|.+.| ++|++++|+.++.+...    .  ..+.++.+|+++.+++.++++       .+
T Consensus         5 ~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~----~--~~~~~~~~d~~~~~~~~~~~~-------~~   70 (118)
T 3ic5_A            5 RWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN----R--MGVATKQVDAKDEAGLAKALG-------GF   70 (118)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH----T--TTCEEEECCTTCHHHHHHHTT-------TC
T ss_pred             cCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH----h--CCCcEEEecCCCHHHHHHHHc-------CC
Confidence            478999999 999999999999999 89999999987766543    2  256778999999988776654       68


Q ss_pred             cEEEEcCCC
Q 022103          109 DILVNNAGV  117 (302)
Q Consensus       109 d~lv~~aG~  117 (302)
                      |++|++++.
T Consensus        71 d~vi~~~~~   79 (118)
T 3ic5_A           71 DAVISAAPF   79 (118)
T ss_dssp             SEEEECSCG
T ss_pred             CEEEECCCc
Confidence            999999963

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=98.74  E-value=9e-09  Score=90.11  Aligned_cols=92  Identities=15%  Similarity=0.208  Sum_probs=63.2

Q ss_pred             ccCcEEEEeCC----------------CchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCH
Q 022103           28 SKETIAIVTGA----------------NKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP   91 (302)
Q Consensus        28 ~~~k~vlItGa----------------s~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~   91 (302)
                      ++||+||||||                +|++|.++|++|+++|++|++++|......       .....+  ...|+.  
T Consensus         1 ~~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~-------~~~~~~--~~~~v~--   69 (232)
T 2gk4_A            1 SNAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKP-------EPHPNL--SIREIT--   69 (232)
T ss_dssp             --CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCC-------CCCTTE--EEEECC--
T ss_pred             CCCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccccc-------cCCCCe--EEEEHh--
Confidence            36899999999                788999999999999999999999753200       001122  233444  


Q ss_pred             HHHHHHHHHHHhhCCCccEEEEcCCCCCC-CCCCCCHHHHH
Q 022103           92 SSIEAFVSWFKSNFAALDILVNNAGVSFN-DIYKNTVEHAE  131 (302)
Q Consensus        92 ~~~~~~~~~~~~~~g~id~lv~~aG~~~~-~~~~~~~e~~~  131 (302)
                       ++.++++.+.+.++.+|++|+||++... +....+.+.+.
T Consensus        70 -s~~em~~~v~~~~~~~Dili~aAAvsD~~p~~~~~~e~~~  109 (232)
T 2gk4_A           70 -NTKDLLIEMQERVQDYQVLIHSMAVSDYTPVYMTGLEEVQ  109 (232)
T ss_dssp             -SHHHHHHHHHHHGGGCSEEEECSBCCSEEEEEEEEHHHHH
T ss_pred             -HHHHHHHHHHHhcCCCCEEEEcCccccccchhhcchhhhh
Confidence             4555666677777899999999998753 33333444443

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=98.65  E-value=1.8e-08  Score=83.11  Aligned_cols=78  Identities=15%  Similarity=0.216  Sum_probs=65.9

Q ss_pred             chHHHHHHHHHHHcCCEEEEEecChhhHH---HHHHHHhhCCCceeEEEeeCCCH--HHHHHHHHHHHhhCCCccEEEEc
Q 022103           40 KGIGFALVKRLAELGLTVILTARDVERGQ---RAVESLSEKGLPVNFFQLDVSDP--SSIEAFVSWFKSNFAALDILVNN  114 (302)
Q Consensus        40 ~gIG~ala~~l~~~G~~V~l~~r~~~~~~---~~~~~l~~~~~~~~~~~~Dlt~~--~~~~~~~~~~~~~~g~id~lv~~  114 (302)
                      +-++.+.++.|++.|++|++..|+.+..+   +..+.+.+.|.++..+++|++++  ++++++++.+.+.+|+ |+||||
T Consensus        26 ~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~-dVLVnn  104 (157)
T 3gxh_A           26 GLPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQAGMDYVYIPVDWQNPKVEDVEAFFAAMDQHKGK-DVLVHC  104 (157)
T ss_dssp             BCCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHTTCEEEECCCCTTSCCHHHHHHHHHHHHHTTTS-CEEEEC
T ss_pred             CCCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHcCCeEEEecCCCCCCCHHHHHHHHHHHHhcCCC-CEEEEC
Confidence            34789999999999999999988765432   23556666677888999999999  9999999999998999 999999


Q ss_pred             CCCC
Q 022103          115 AGVS  118 (302)
Q Consensus       115 aG~~  118 (302)
                      ||+.
T Consensus       105 Agg~  108 (157)
T 3gxh_A          105 LANY  108 (157)
T ss_dssp             SBSH
T ss_pred             CCCC
Confidence            9974

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.62  E-value=2.5e-07  Score=87.61  Aligned_cols=81  Identities=20%  Similarity=0.280  Sum_probs=71.1

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHcC---CEEEEEecChhhHHHHHHHHhhCC-CceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           31 TIAIVTGANKGIGFALVKRLAELG---LTVILTARDVERGQRAVESLSEKG-LPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~G---~~V~l~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      ++++|+|+ |+||+++++.|+++|   .+|++++|+.++++...+++...+ .++..+.+|++|.+++++++++.     
T Consensus         2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~-----   75 (405)
T 4ina_A            2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEV-----   75 (405)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHH-----
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhh-----
Confidence            46899999 899999999999998   499999999999999888886532 46888999999999999999876     


Q ss_pred             CccEEEEcCCC
Q 022103          107 ALDILVNNAGV  117 (302)
Q Consensus       107 ~id~lv~~aG~  117 (302)
                      ++|+|||++|.
T Consensus        76 ~~DvVin~ag~   86 (405)
T 4ina_A           76 KPQIVLNIALP   86 (405)
T ss_dssp             CCSEEEECSCG
T ss_pred             CCCEEEECCCc
Confidence            68999999985

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=98.58  E-value=6.9e-10  Score=106.81  Aligned_cols=133  Identities=17%  Similarity=0.125  Sum_probs=76.7

Q ss_pred             cccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhh------CCCceeEEEeeCCCHHHHHH-H
Q 022103           25 KWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSE------KGLPVNFFQLDVSDPSSIEA-F   97 (302)
Q Consensus        25 ~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~------~~~~~~~~~~Dlt~~~~~~~-~   97 (302)
                      ...+.||+|+|||++ +||+++|+.|++.|++|+++++++.+........-.      .-..+.++..-.....-+.. .
T Consensus       260 g~~L~GKtVvVtGaG-gIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~~g~dv~~lee~~~~aDvVi~atG~~~vl~~e~  338 (488)
T 3ond_A          260 DVMIAGKVAVVAGYG-DVGKGCAAALKQAGARVIVTEIDPICALQATMEGLQVLTLEDVVSEADIFVTTTGNKDIIMLDH  338 (488)
T ss_dssp             CCCCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCGGGTTTTCSEEEECSSCSCSBCHHH
T ss_pred             CCcccCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHhCCccCCHHHHHHhcCEEEeCCCChhhhhHHH
Confidence            346899999999997 999999999999999999999998776554432210      00011111111111111110 1


Q ss_pred             HHHHHhhCCCccEEEEcCCCCCCCCCCCCHHHHHHH-------HHhhhhHHHHHH-HHHhhhhhcCCCCCcEEEecCCCc
Q 022103           98 VSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETV-------IRTNFYGAKLLT-ESLLPLFRRSPSKSRILNISSRLG  169 (302)
Q Consensus        98 ~~~~~~~~g~id~lv~~aG~~~~~~~~~~~e~~~~~-------~~vn~~~~~~l~-~~~~~~l~~~~~~~~iv~vsS~~~  169 (302)
                      ++.     -+.+.+|+|+|...   .+++.+.++..       +..|+.+.++.. +..++.|.    .|+|||++|..+
T Consensus       339 l~~-----mk~gaiVvNaG~~~---~Ei~~~~l~~~~~v~~~~i~~~v~~~~~~~fg~aI~lLa----eGRIVNlsS~~G  406 (488)
T 3ond_A          339 MKK-----MKNNAIVCNIGHFD---NEIDMLGLETHPGVKRITIKPQTDRWVFPETNTGIIILA----EGRLMNLGCATG  406 (488)
T ss_dssp             HTT-----SCTTEEEEESSSTT---TTBTHHHHHTSTTCEEEEEETTEEEEECTTTCCEEEEEG----GGSCHHHHHSCC
T ss_pred             HHh-----cCCCeEEEEcCCCC---cccchHHHHHhhhhheEEeeeeEEEEEecchHHHHHHHc----CCcEEEEecCcc
Confidence            111     14567788888642   34566666544       233333322222 23333332    389999999887


Q ss_pred             c
Q 022103          170 T  170 (302)
Q Consensus       170 ~  170 (302)
                      +
T Consensus       407 ~  407 (488)
T 3ond_A          407 H  407 (488)
T ss_dssp             S
T ss_pred             c
Confidence            5

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=98.50  E-value=3.2e-07  Score=84.08  Aligned_cols=81  Identities=16%  Similarity=0.163  Sum_probs=63.0

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      .+|++++|||++||||.++++.+...|++|++++|+.++++.+ +++   +..   ..+|.++.+++.+.+.++..  +.
T Consensus       144 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~-~~~---g~~---~~~d~~~~~~~~~~~~~~~~--~~  214 (333)
T 1v3u_A          144 KGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL-KQI---GFD---AAFNYKTVNSLEEALKKASP--DG  214 (333)
T ss_dssp             CSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT---TCS---EEEETTSCSCHHHHHHHHCT--TC
T ss_pred             CCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-Hhc---CCc---EEEecCCHHHHHHHHHHHhC--CC
Confidence            3689999999999999999999999999999999998877665 444   322   33588774555555555543  57


Q ss_pred             ccEEEEcCCC
Q 022103          108 LDILVNNAGV  117 (302)
Q Consensus       108 id~lv~~aG~  117 (302)
                      +|++|+|+|.
T Consensus       215 ~d~vi~~~g~  224 (333)
T 1v3u_A          215 YDCYFDNVGG  224 (333)
T ss_dssp             EEEEEESSCH
T ss_pred             CeEEEECCCh
Confidence            9999999993

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=98.50  E-value=3.3e-08  Score=96.65  Aligned_cols=99  Identities=21%  Similarity=0.257  Sum_probs=67.8

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      ++++|+++|||| ||+|++++..|++.|++|++++|+.++.++.++++.   .++.    ++.+.+   ++      ..+
T Consensus       361 ~l~~k~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~~~~a~~la~~~~---~~~~----~~~dl~---~~------~~~  423 (523)
T 2o7s_A          361 PLASKTVVVIGA-GGAGKALAYGAKEKGAKVVIANRTYERALELAEAIG---GKAL----SLTDLD---NY------HPE  423 (523)
T ss_dssp             -----CEEEECC-SHHHHHHHHHHHHHCC-CEEEESSHHHHHHHHHHTT---C-CE----ETTTTT---TC--------C
T ss_pred             ccCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcC---Ccee----eHHHhh---hc------ccc
Confidence            467899999999 599999999999999999999999988888777663   2221    222210   00      113


Q ss_pred             CccEEEEcCCCCC------CCCCCCCHHHHHHHHHhhhhHHH
Q 022103          107 ALDILVNNAGVSF------NDIYKNTVEHAETVIRTNFYGAK  142 (302)
Q Consensus       107 ~id~lv~~aG~~~------~~~~~~~~e~~~~~~~vn~~~~~  142 (302)
                      .+|+||||+|...      .++.+.+.+.+..++++|+.+..
T Consensus       424 ~~DilVN~agvg~~~~~~~~~~~~~~~~~~~~v~Dvny~p~~  465 (523)
T 2o7s_A          424 DGMVLANTTSMGMQPNVEETPISKDALKHYALVFDAVYTPRI  465 (523)
T ss_dssp             CSEEEEECSSTTCTTCTTCCSSCTTTGGGEEEEEECCCSSSS
T ss_pred             CceEEEECCCCCCCCCCCCCCCChHHcCcCcEEEEEeeCCcc
Confidence            5899999998632      23555667788889999998753

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=98.48  E-value=7.7e-08  Score=86.85  Aligned_cols=82  Identities=21%  Similarity=0.269  Sum_probs=61.9

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      .++++|+++|+|++ |+|+++++.|++.| +|++++|+.++.++..+++...+.....+.+|+++.          .+.+
T Consensus       124 ~~l~~k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~~----------~~~~  191 (287)
T 1nvt_A          124 GRVKDKNIVIYGAG-GAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGL----------DVDL  191 (287)
T ss_dssp             CCCCSCEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECT----------TCCC
T ss_pred             CCcCCCEEEEECch-HHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcccccceeEEEeeH----------HHhh
Confidence            45789999999997 99999999999999 999999999888888777654210001123455442          3456


Q ss_pred             CCccEEEEcCCCCC
Q 022103          106 AALDILVNNAGVSF  119 (302)
Q Consensus       106 g~id~lv~~aG~~~  119 (302)
                      +.+|+||+|+|...
T Consensus       192 ~~~DilVn~ag~~~  205 (287)
T 1nvt_A          192 DGVDIIINATPIGM  205 (287)
T ss_dssp             TTCCEEEECSCTTC
T ss_pred             CCCCEEEECCCCCC
Confidence            78999999999753

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.48  E-value=2.6e-07  Score=88.69  Aligned_cols=79  Identities=16%  Similarity=0.262  Sum_probs=62.9

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      |++++++|+| +|++|+++++.|++.|++|++++|+.++.+...+.+    ..+..+.+|+++.+++.++++       .
T Consensus         1 M~~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~----~~~~~~~~Dv~d~~~l~~~l~-------~   68 (450)
T 1ff9_A            1 MATKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGV----QHSTPISLDVNDDAALDAEVA-------K   68 (450)
T ss_dssp             -CCCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTC----TTEEEEECCTTCHHHHHHHHT-------T
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhc----CCceEEEeecCCHHHHHHHHc-------C
Confidence            3568899998 799999999999999999999999987765443322    246788899999988877664       6


Q ss_pred             ccEEEEcCCCC
Q 022103          108 LDILVNNAGVS  118 (302)
Q Consensus       108 id~lv~~aG~~  118 (302)
                      +|+|||+++..
T Consensus        69 ~DvVIn~a~~~   79 (450)
T 1ff9_A           69 HDLVISLIPYT   79 (450)
T ss_dssp             SSEEEECCC--
T ss_pred             CcEEEECCccc
Confidence            89999999864

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.48  E-value=4.3e-07  Score=84.92  Aligned_cols=108  Identities=19%  Similarity=0.223  Sum_probs=76.0

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      .+++++++|+|+ |+||+++++.+...|++|++++|+.++++...+.+   +..   +.+|.++.+++.+.+.       
T Consensus       163 ~l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~---g~~---~~~~~~~~~~l~~~~~-------  228 (369)
T 2eez_A          163 GVAPASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVF---GGR---VITLTATEANIKKSVQ-------  228 (369)
T ss_dssp             BBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT---TTS---EEEEECCHHHHHHHHH-------
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhc---Cce---EEEecCCHHHHHHHHh-------
Confidence            478899999999 99999999999999999999999998876655433   222   4568888887776664       


Q ss_pred             CccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCc
Q 022103          107 ALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLG  169 (302)
Q Consensus       107 ~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~  169 (302)
                      ..|++|+++|.....    +              +..+.+..++.|++   .+.||++++..+
T Consensus       229 ~~DvVi~~~g~~~~~----~--------------~~li~~~~l~~mk~---gg~iV~v~~~~g  270 (369)
T 2eez_A          229 HADLLIGAVLVPGAK----A--------------PKLVTRDMLSLMKE---GAVIVDVAVDQG  270 (369)
T ss_dssp             HCSEEEECCC-------------------------CCSCHHHHTTSCT---TCEEEECC----
T ss_pred             CCCEEEECCCCCccc----c--------------chhHHHHHHHhhcC---CCEEEEEecCCC
Confidence            579999999974311    0              12234556666643   588999987653

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.47  E-value=4.9e-07  Score=76.48  Aligned_cols=104  Identities=13%  Similarity=0.210  Sum_probs=72.3

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      .+|++++|+||+||||.++++.+...|++|++++|+.++.+...    +.+..   ..+|.++.+..+.+.+....  +.
T Consensus        37 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~----~~g~~---~~~d~~~~~~~~~~~~~~~~--~~  107 (198)
T 1pqw_A           37 SPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLS----RLGVE---YVGDSRSVDFADEILELTDG--YG  107 (198)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH----TTCCS---EEEETTCSTHHHHHHHHTTT--CC
T ss_pred             CCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH----HcCCC---EEeeCCcHHHHHHHHHHhCC--CC
Confidence            36899999999999999999999999999999999987665432    22332   23577776544444433221  36


Q ss_pred             ccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCC
Q 022103          108 LDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRL  168 (302)
Q Consensus       108 id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~  168 (302)
                      +|++|+|+|..          .               .+.+++.++.   .|++|++++..
T Consensus       108 ~D~vi~~~g~~----------~---------------~~~~~~~l~~---~G~~v~~g~~~  140 (198)
T 1pqw_A          108 VDVVLNSLAGE----------A---------------IQRGVQILAP---GGRFIELGKKD  140 (198)
T ss_dssp             EEEEEECCCTH----------H---------------HHHHHHTEEE---EEEEEECSCGG
T ss_pred             CeEEEECCchH----------H---------------HHHHHHHhcc---CCEEEEEcCCC
Confidence            99999999731          1               2344455544   48999988754

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=98.45  E-value=4.9e-07  Score=83.40  Aligned_cols=105  Identities=14%  Similarity=0.118  Sum_probs=77.1

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      .+|++++|+|++||||.++++.+...|++|++++|+.++++.. +++   +..   ...|.++.+++.+.+.++...  .
T Consensus       168 ~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~-~~~---g~~---~~~d~~~~~~~~~~~~~~~~~--~  238 (347)
T 2hcy_A          168 MAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELF-RSI---GGE---VFIDFTKEKDIVGAVLKATDG--G  238 (347)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHH-HHT---TCC---EEEETTTCSCHHHHHHHHHTS--C
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHH-HHc---CCc---eEEecCccHhHHHHHHHHhCC--C
Confidence            3589999999999999999999999999999999998776433 333   322   234887656666666665443  6


Q ss_pred             ccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCC
Q 022103          108 LDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRL  168 (302)
Q Consensus       108 id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~  168 (302)
                      +|++|+++|..         +               ..+.+++.+++   .|+++.+++..
T Consensus       239 ~D~vi~~~g~~---------~---------------~~~~~~~~l~~---~G~iv~~g~~~  272 (347)
T 2hcy_A          239 AHGVINVSVSE---------A---------------AIEASTRYVRA---NGTTVLVGMPA  272 (347)
T ss_dssp             EEEEEECSSCH---------H---------------HHHHHTTSEEE---EEEEEECCCCT
T ss_pred             CCEEEECCCcH---------H---------------HHHHHHHHHhc---CCEEEEEeCCC
Confidence            99999999851         0               34555666654   48999998754

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=98.39  E-value=2.4e-06  Score=78.15  Aligned_cols=84  Identities=19%  Similarity=0.229  Sum_probs=66.4

Q ss_pred             cccccCcEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecC---hhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHH
Q 022103           25 KWWSKETIAIVTGANKGIGFALVKRLAELGL-TVILTARD---VERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSW  100 (302)
Q Consensus        25 ~~~~~~k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~---~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~  100 (302)
                      .+++++|+++|+|+ ||+|++++..|++.|+ +|++++|+   .++.++.++++.... .+.+...++.+.+++.+.+. 
T Consensus       149 ~~~l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~-~~~~~~~~~~~~~~l~~~l~-  225 (315)
T 3tnl_A          149 GHDIIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKT-DCKAQLFDIEDHEQLRKEIA-  225 (315)
T ss_dssp             TCCCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHS-SCEEEEEETTCHHHHHHHHH-
T ss_pred             CCCccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhc-CCceEEeccchHHHHHhhhc-
Confidence            35688999999998 7999999999999999 89999999   888888888876532 23444567777666655444 


Q ss_pred             HHhhCCCccEEEEcCCC
Q 022103          101 FKSNFAALDILVNNAGV  117 (302)
Q Consensus       101 ~~~~~g~id~lv~~aG~  117 (302)
                            ..|+||++...
T Consensus       226 ------~aDiIINaTp~  236 (315)
T 3tnl_A          226 ------ESVIFTNATGV  236 (315)
T ss_dssp             ------TCSEEEECSST
T ss_pred             ------CCCEEEECccC
Confidence                  67999998753

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.32  E-value=1.6e-06  Score=83.57  Aligned_cols=82  Identities=15%  Similarity=0.217  Sum_probs=63.7

Q ss_pred             ccccccCcEEEEeCCCchHHHHHHHHHHHc-CCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHH
Q 022103           24 TKWWSKETIAIVTGANKGIGFALVKRLAEL-GLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFK  102 (302)
Q Consensus        24 ~~~~~~~k~vlItGas~gIG~ala~~l~~~-G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~  102 (302)
                      -..++++++++|+|+ |++|+++++.|++. |++|++++|+.++.+...+.     ..+..+.+|+++.+++.++++   
T Consensus        17 ~~~~l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~-----~~~~~~~~D~~d~~~l~~~l~---   87 (467)
T 2axq_A           17 IEGRHMGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKP-----SGSKAISLDVTDDSALDKVLA---   87 (467)
T ss_dssp             ------CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGG-----GTCEEEECCTTCHHHHHHHHH---
T ss_pred             cccCCCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHh-----cCCcEEEEecCCHHHHHHHHc---
Confidence            356678899999998 99999999999998 78999999998877665543     135677899999988877665   


Q ss_pred             hhCCCccEEEEcCCCC
Q 022103          103 SNFAALDILVNNAGVS  118 (302)
Q Consensus       103 ~~~g~id~lv~~aG~~  118 (302)
                          .+|+||++++..
T Consensus        88 ----~~DvVIn~tp~~   99 (467)
T 2axq_A           88 ----DNDVVISLIPYT   99 (467)
T ss_dssp             ----TSSEEEECSCGG
T ss_pred             ----CCCEEEECCchh
Confidence                689999999863

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=98.23  E-value=3.2e-06  Score=75.55  Aligned_cols=77  Identities=17%  Similarity=0.320  Sum_probs=59.5

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      .++++++++|+|+ ||+|++++..|++.|++|++++|+.++.++..+++...+ .+     +..+.+++       . + 
T Consensus       115 ~~l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~-~~-----~~~~~~~~-------~-~-  178 (271)
T 1nyt_A          115 FIRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTG-SI-----QALSMDEL-------E-G-  178 (271)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGS-SE-----EECCSGGG-------T-T-
T ss_pred             cCcCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccC-Ce-----eEecHHHh-------c-c-
Confidence            4578999999998 799999999999999999999999999888887775432 22     22222222       1 1 


Q ss_pred             CCccEEEEcCCCC
Q 022103          106 AALDILVNNAGVS  118 (302)
Q Consensus       106 g~id~lv~~aG~~  118 (302)
                      +.+|+||+++|..
T Consensus       179 ~~~DivVn~t~~~  191 (271)
T 1nyt_A          179 HEFDLIINATSSG  191 (271)
T ss_dssp             CCCSEEEECCSCG
T ss_pred             CCCCEEEECCCCC
Confidence            5899999999974

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=98.22  E-value=3.7e-06  Score=76.71  Aligned_cols=104  Identities=16%  Similarity=0.260  Sum_probs=73.5

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCc
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAAL  108 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~i  108 (302)
                      +|++++|+||+||||.++++.+...|++|++++|+.++++...+ +   +..   ..+|.++.+..+.+.+....  ..+
T Consensus       140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~-~---g~~---~~~~~~~~~~~~~~~~~~~~--~~~  210 (327)
T 1qor_A          140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK-A---GAW---QVINYREEDLVERLKEITGG--KKV  210 (327)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH-H---TCS---EEEETTTSCHHHHHHHHTTT--CCE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-c---CCC---EEEECCCccHHHHHHHHhCC--CCc
Confidence            58999999999999999999999999999999999877665543 3   222   23577766555444443322  369


Q ss_pred             cEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCc
Q 022103          109 DILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLG  169 (302)
Q Consensus       109 d~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~  169 (302)
                      |++|+|+|.  .     .                  .+.+++.++.   .|+++.+++..+
T Consensus       211 D~vi~~~g~--~-----~------------------~~~~~~~l~~---~G~iv~~g~~~~  243 (327)
T 1qor_A          211 RVVYDSVGR--D-----T------------------WERSLDCLQR---RGLMVSFGNSSG  243 (327)
T ss_dssp             EEEEECSCG--G-----G------------------HHHHHHTEEE---EEEEEECCCTTC
T ss_pred             eEEEECCch--H-----H------------------HHHHHHHhcC---CCEEEEEecCCC
Confidence            999999992  1     1                  2334444543   489999987544

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.21  E-value=5.4e-06  Score=66.08  Aligned_cols=74  Identities=18%  Similarity=0.261  Sum_probs=59.5

Q ss_pred             CcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCcc
Q 022103           30 ETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALD  109 (302)
Q Consensus        30 ~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id  109 (302)
                      .++++|+|+ |.+|.++++.|.++|++|+++++++++.+...+    .  .+.++.+|.++++.++++      .....|
T Consensus         6 ~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~----~--~~~~~~gd~~~~~~l~~~------~~~~~d   72 (141)
T 3llv_A            6 RYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLED----E--GFDAVIADPTDESFYRSL------DLEGVS   72 (141)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----T--TCEEEECCTTCHHHHHHS------CCTTCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH----C--CCcEEECCCCCHHHHHhC------CcccCC
Confidence            467999998 779999999999999999999999877655433    2  357888999999877643      224789


Q ss_pred             EEEEcCC
Q 022103          110 ILVNNAG  116 (302)
Q Consensus       110 ~lv~~aG  116 (302)
                      .+|.+.+
T Consensus        73 ~vi~~~~   79 (141)
T 3llv_A           73 AVLITGS   79 (141)
T ss_dssp             EEEECCS
T ss_pred             EEEEecC
Confidence            9998777

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=98.20  E-value=2.4e-06  Score=78.53  Aligned_cols=82  Identities=17%  Similarity=0.199  Sum_probs=61.4

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      .+|++++|+|++|+||..+++.+...|++|++++|+.++++.+.+++   |..   ...|.++.+++.+.+.++..  +.
T Consensus       154 ~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~---g~~---~~~d~~~~~~~~~~~~~~~~--~~  225 (345)
T 2j3h_A          154 KEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKF---GFD---DAFNYKEESDLTAALKRCFP--NG  225 (345)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTS---CCS---EEEETTSCSCSHHHHHHHCT--TC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---CCc---eEEecCCHHHHHHHHHHHhC--CC
Confidence            36899999999999999999999999999999999988776554333   332   23477665445555554432  47


Q ss_pred             ccEEEEcCCC
Q 022103          108 LDILVNNAGV  117 (302)
Q Consensus       108 id~lv~~aG~  117 (302)
                      +|++|+|+|.
T Consensus       226 ~d~vi~~~g~  235 (345)
T 2j3h_A          226 IDIYFENVGG  235 (345)
T ss_dssp             EEEEEESSCH
T ss_pred             CcEEEECCCH
Confidence            9999999984

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=98.20  E-value=5.2e-06  Score=76.01  Aligned_cols=81  Identities=22%  Similarity=0.299  Sum_probs=60.7

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      -++++++|+||+||||.++++.+...|++|++++|+.++++.+. ++   +..   ...|.++.+..+.+.+....  ..
T Consensus       144 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~-~~---g~~---~~~d~~~~~~~~~i~~~~~~--~~  214 (333)
T 1wly_A          144 KPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETAR-KL---GCH---HTINYSTQDFAEVVREITGG--KG  214 (333)
T ss_dssp             CTTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HH---TCS---EEEETTTSCHHHHHHHHHTT--CC
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc---CCC---EEEECCCHHHHHHHHHHhCC--CC
Confidence            35889999999999999999999999999999999987776553 33   222   23477766554444443322  36


Q ss_pred             ccEEEEcCCC
Q 022103          108 LDILVNNAGV  117 (302)
Q Consensus       108 id~lv~~aG~  117 (302)
                      +|++|+|+|.
T Consensus       215 ~d~vi~~~g~  224 (333)
T 1wly_A          215 VDVVYDSIGK  224 (333)
T ss_dssp             EEEEEECSCT
T ss_pred             CeEEEECCcH
Confidence            9999999995

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=98.18  E-value=5.5e-06  Score=76.64  Aligned_cols=81  Identities=19%  Similarity=0.222  Sum_probs=60.3

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      .+|++++|+||+||||.++++.+...|++|++++|+.++++.+ +++.   ..   ..+|.++.+..+.+.+...  ...
T Consensus       161 ~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~g---~~---~~~~~~~~~~~~~~~~~~~--~~~  231 (354)
T 2j8z_A          161 QAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMA-EKLG---AA---AGFNYKKEDFSEATLKFTK--GAG  231 (354)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHHT---CS---EEEETTTSCHHHHHHHHTT--TSC
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcC---Cc---EEEecCChHHHHHHHHHhc--CCC
Confidence            3589999999999999999999999999999999998877665 4442   22   2356666554444333221  136


Q ss_pred             ccEEEEcCCC
Q 022103          108 LDILVNNAGV  117 (302)
Q Consensus       108 id~lv~~aG~  117 (302)
                      +|++|+|+|.
T Consensus       232 ~d~vi~~~G~  241 (354)
T 2j8z_A          232 VNLILDCIGG  241 (354)
T ss_dssp             EEEEEESSCG
T ss_pred             ceEEEECCCc
Confidence            9999999995

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=98.15  E-value=4.5e-06  Score=77.16  Aligned_cols=79  Identities=19%  Similarity=0.181  Sum_probs=58.4

Q ss_pred             cC--cEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           29 KE--TIAIVTGANKGIGFALVKRLAELGL-TVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        29 ~~--k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      +|  ++++|+|++||||.++++.+...|+ +|++++++.++++.+.+++   +..   ..+|.++.+..+. +.+...  
T Consensus       158 ~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~---g~~---~~~d~~~~~~~~~-~~~~~~--  228 (357)
T 2zb4_A          158 AGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSEL---GFD---AAINYKKDNVAEQ-LRESCP--  228 (357)
T ss_dssp             TTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTS---CCS---EEEETTTSCHHHH-HHHHCT--
T ss_pred             CCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc---CCc---eEEecCchHHHHH-HHHhcC--
Confidence            47  9999999999999999999999999 9999999987776655433   322   2357766443332 333222  


Q ss_pred             CCccEEEEcCC
Q 022103          106 AALDILVNNAG  116 (302)
Q Consensus       106 g~id~lv~~aG  116 (302)
                      +.+|++|+|+|
T Consensus       229 ~~~d~vi~~~G  239 (357)
T 2zb4_A          229 AGVDVYFDNVG  239 (357)
T ss_dssp             TCEEEEEESCC
T ss_pred             CCCCEEEECCC
Confidence            26999999999

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=98.14  E-value=7.8e-06  Score=75.60  Aligned_cols=81  Identities=20%  Similarity=0.250  Sum_probs=59.5

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      .+|++++|+|++||||.++++.+...|++|++++|+.++++. ++++   +..   ..+|..+.+..+++.+...  ...
T Consensus       169 ~~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~-~~~~---ga~---~~~d~~~~~~~~~~~~~~~--~~~  239 (351)
T 1yb5_A          169 KAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKI-VLQN---GAH---EVFNHREVNYIDKIKKYVG--EKG  239 (351)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHH-HHHT---TCS---EEEETTSTTHHHHHHHHHC--TTC
T ss_pred             CCcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHH-HHHc---CCC---EEEeCCCchHHHHHHHHcC--CCC
Confidence            358899999999999999999999999999999999887763 3333   322   2357776554444433321  136


Q ss_pred             ccEEEEcCCC
Q 022103          108 LDILVNNAGV  117 (302)
Q Consensus       108 id~lv~~aG~  117 (302)
                      +|++|+|+|.
T Consensus       240 ~D~vi~~~G~  249 (351)
T 1yb5_A          240 IDIIIEMLAN  249 (351)
T ss_dssp             EEEEEESCHH
T ss_pred             cEEEEECCCh
Confidence            9999999984

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=98.13  E-value=1.3e-05  Score=73.71  Aligned_cols=120  Identities=12%  Similarity=0.100  Sum_probs=82.2

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHcCC-------EEEEEecC----hhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHH
Q 022103           31 TIAIVTGANKGIGFALVKRLAELGL-------TVILTARD----VERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVS   99 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~G~-------~V~l~~r~----~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~   99 (302)
                      .+++||||+|.||..++..|+..|.       +|++++++    .++++..+..+.+....+   ..|+....+..+.+ 
T Consensus         6 ~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~---~~~i~~~~~~~~al-   81 (329)
T 1b8p_A            6 MRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPL---LAGMTAHADPMTAF-   81 (329)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTT---EEEEEEESSHHHHT-
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccc---cCcEEEecCcHHHh-
Confidence            5799999999999999999999885       79999998    655665555565421122   13444333333333 


Q ss_pred             HHHhhCCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCC
Q 022103          100 WFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRL  168 (302)
Q Consensus       100 ~~~~~~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~  168 (302)
                            ...|++||+||....+  ..+   ..+.+..|+.....+++.+..+..   ..++||++|.-.
T Consensus        82 ------~~aD~Vi~~ag~~~~~--g~~---r~dl~~~N~~i~~~i~~~i~~~~~---p~a~ii~~SNPv  136 (329)
T 1b8p_A           82 ------KDADVALLVGARPRGP--GME---RKDLLEANAQIFTVQGKAIDAVAS---RNIKVLVVGNPA  136 (329)
T ss_dssp             ------TTCSEEEECCCCCCCT--TCC---HHHHHHHHHHHHHHHHHHHHHHSC---TTCEEEECSSSH
T ss_pred             ------CCCCEEEEeCCCCCCC--CCC---HHHHHHHHHHHHHHHHHHHHHhcC---CCeEEEEccCch
Confidence                  3689999999975432  223   345688898888888888876521   246888888643

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=98.12  E-value=6.9e-06  Score=75.20  Aligned_cols=81  Identities=19%  Similarity=0.213  Sum_probs=60.1

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      -+|++++|+|++||||.++++.+...|++|++++|+.++++.+.+++   +..   ...|..+.+..+.+.+ ..  .+.
T Consensus       148 ~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~---g~~---~~~~~~~~~~~~~~~~-~~--~~~  218 (336)
T 4b7c_A          148 KNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEEL---GFD---GAIDYKNEDLAAGLKR-EC--PKG  218 (336)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTT---CCS---EEEETTTSCHHHHHHH-HC--TTC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---CCC---EEEECCCHHHHHHHHH-hc--CCC
Confidence            35899999999999999999999999999999999998877664544   322   2246666543333333 22  247


Q ss_pred             ccEEEEcCCC
Q 022103          108 LDILVNNAGV  117 (302)
Q Consensus       108 id~lv~~aG~  117 (302)
                      +|++++|+|.
T Consensus       219 ~d~vi~~~g~  228 (336)
T 4b7c_A          219 IDVFFDNVGG  228 (336)
T ss_dssp             EEEEEESSCH
T ss_pred             ceEEEECCCc
Confidence            9999999985

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.12  E-value=2.6e-06  Score=67.49  Aligned_cols=77  Identities=14%  Similarity=0.227  Sum_probs=57.5

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      +++++++|+|+ |.+|..+++.|.+.|++|++++|+.++.+.    +.+.+  ...+.+|.++.+.+.++      ....
T Consensus         4 ~~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~----~~~~~--~~~~~~d~~~~~~l~~~------~~~~   70 (144)
T 2hmt_A            4 IKNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNA----YASYA--THAVIANATEENELLSL------GIRN   70 (144)
T ss_dssp             --CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHT----TTTTC--SEEEECCTTCHHHHHTT------TGGG
T ss_pred             CcCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHH----HHHhC--CEEEEeCCCCHHHHHhc------CCCC
Confidence            45677999998 999999999999999999999998765443    22222  35677899887655432      1246


Q ss_pred             ccEEEEcCCC
Q 022103          108 LDILVNNAGV  117 (302)
Q Consensus       108 id~lv~~aG~  117 (302)
                      +|++|++++.
T Consensus        71 ~d~vi~~~~~   80 (144)
T 2hmt_A           71 FEYVIVAIGA   80 (144)
T ss_dssp             CSEEEECCCS
T ss_pred             CCEEEECCCC
Confidence            8999999875

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=98.12  E-value=8.4e-06  Score=73.46  Aligned_cols=81  Identities=21%  Similarity=0.222  Sum_probs=61.9

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhh
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGL-TVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSN  104 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~  104 (302)
                      .++++|+++|+|+ ||+|++++..|++.|+ +|++++|+.++.++.++++......+.+...++.+.   .+.+.     
T Consensus       123 ~~l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~l---~~~l~-----  193 (283)
T 3jyo_A          123 PNAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGI---EDVIA-----  193 (283)
T ss_dssp             TTCCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTTH---HHHHH-----
T ss_pred             cCcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHHH---HHHHh-----
Confidence            3578999999998 7999999999999998 799999999999988888875433334444444333   33333     


Q ss_pred             CCCccEEEEcCCC
Q 022103          105 FAALDILVNNAGV  117 (302)
Q Consensus       105 ~g~id~lv~~aG~  117 (302)
                        ..|+||++...
T Consensus       194 --~~DiVInaTp~  204 (283)
T 3jyo_A          194 --AADGVVNATPM  204 (283)
T ss_dssp             --HSSEEEECSST
T ss_pred             --cCCEEEECCCC
Confidence              46999999754

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=98.11  E-value=6.9e-05  Score=68.73  Aligned_cols=105  Identities=18%  Similarity=0.134  Sum_probs=69.5

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHcC--CEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCc
Q 022103           31 TIAIVTGANKGIGFALVKRLAELG--LTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAAL  108 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~G--~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~i  108 (302)
                      .+++||||+|.+|..++..|+++|  .+|++++++.+  +..+..+.+......+ .. +++.+++.+.++       ..
T Consensus         9 mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~--~~~~~dL~~~~~~~~v-~~-~~~t~d~~~al~-------ga   77 (326)
T 1smk_A            9 FKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA--PGVTADISHMDTGAVV-RG-FLGQQQLEAALT-------GM   77 (326)
T ss_dssp             EEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH--HHHHHHHHTSCSSCEE-EE-EESHHHHHHHHT-------TC
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc--HhHHHHhhcccccceE-EE-EeCCCCHHHHcC-------CC
Confidence            469999999999999999999998  78999998775  2233334432211111 11 223344444443       68


Q ss_pred             cEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhh
Q 022103          109 DILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPL  151 (302)
Q Consensus       109 d~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~  151 (302)
                      |++|+++|....+  ..+.   .+.+.+|+.....+++.+..+
T Consensus        78 DvVi~~ag~~~~~--g~~r---~dl~~~N~~~~~~i~~~i~~~  115 (326)
T 1smk_A           78 DLIIVPAGVPRKP--GMTR---DDLFKINAGIVKTLCEGIAKC  115 (326)
T ss_dssp             SEEEECCCCCCCS--SCCC---SHHHHHHHHHHHHHHHHHHHH
T ss_pred             CEEEEcCCcCCCC--CCCH---HHHHHHHHHHHHHHHHHHHhh
Confidence            9999999975432  1222   245788888888888877665

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=98.06  E-value=2.8e-05  Score=70.97  Aligned_cols=84  Identities=20%  Similarity=0.255  Sum_probs=63.0

Q ss_pred             cccccCcEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecC---hhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHH
Q 022103           25 KWWSKETIAIVTGANKGIGFALVKRLAELGL-TVILTARD---VERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSW  100 (302)
Q Consensus        25 ~~~~~~k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~---~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~  100 (302)
                      .+++++|+++|+|+ ||+|++++..|++.|+ +|+++.|+   .++.++.++++.... ...+...++.+.+.+.+.+. 
T Consensus       143 ~~~l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~-~~~v~~~~~~~l~~~~~~l~-  219 (312)
T 3t4e_A          143 GFDMRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENT-DCVVTVTDLADQHAFTEALA-  219 (312)
T ss_dssp             TCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHS-SCEEEEEETTCHHHHHHHHH-
T ss_pred             CCCcCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhcc-CcceEEechHhhhhhHhhcc-
Confidence            35688999999998 8999999999999998 89999999   888888888776532 23334456666543333333 


Q ss_pred             HHhhCCCccEEEEcCCC
Q 022103          101 FKSNFAALDILVNNAGV  117 (302)
Q Consensus       101 ~~~~~g~id~lv~~aG~  117 (302)
                            ..|+||++...
T Consensus       220 ------~~DiIINaTp~  230 (312)
T 3t4e_A          220 ------SADILTNGTKV  230 (312)
T ss_dssp             ------HCSEEEECSST
T ss_pred             ------CceEEEECCcC
Confidence                  47999998754

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=98.01  E-value=2e-05  Score=72.47  Aligned_cols=80  Identities=18%  Similarity=0.261  Sum_probs=58.3

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHc-CCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           29 KETIAIVTGANKGIGFALVKRLAEL-GLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~-G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      ++++++|+|++||||..+++.+... |++|++++++.++++.+ +++   +..   ...|.++.+..+++ .++... +.
T Consensus       170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~-~~~---g~~---~~~~~~~~~~~~~~-~~~~~~-~~  240 (347)
T 1jvb_A          170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAA-KRA---GAD---YVINASMQDPLAEI-RRITES-KG  240 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHH-HHH---TCS---EEEETTTSCHHHHH-HHHTTT-SC
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHh---CCC---EEecCCCccHHHHH-HHHhcC-CC
Confidence            6899999999999999999999999 99999999998877655 334   322   22466664433322 222221 47


Q ss_pred             ccEEEEcCCC
Q 022103          108 LDILVNNAGV  117 (302)
Q Consensus       108 id~lv~~aG~  117 (302)
                      +|++|+++|.
T Consensus       241 ~d~vi~~~g~  250 (347)
T 1jvb_A          241 VDAVIDLNNS  250 (347)
T ss_dssp             EEEEEESCCC
T ss_pred             ceEEEECCCC
Confidence            9999999986

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=97.99  E-value=2.6e-05  Score=74.29  Aligned_cols=86  Identities=13%  Similarity=0.191  Sum_probs=60.3

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEe--eCC---------CHHHHHH
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQL--DVS---------DPSSIEA   96 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~--Dlt---------~~~~~~~   96 (302)
                      -+|++|+|+|++|+||...++.+...|++|++++++.++++.+ +++   |....+-..  |+.         +.++++.
T Consensus       219 ~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~-~~l---Ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~  294 (447)
T 4a0s_A          219 KQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAV-RAL---GCDLVINRAELGITDDIADDPRRVVETGRK  294 (447)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT---TCCCEEEHHHHTCCTTGGGCHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-Hhc---CCCEEEecccccccccccccccccchhhhH
Confidence            4589999999999999999999999999999999988777654 333   333222221  221         1234445


Q ss_pred             HHHHHHhhC-CCccEEEEcCCC
Q 022103           97 FVSWFKSNF-AALDILVNNAGV  117 (302)
Q Consensus        97 ~~~~~~~~~-g~id~lv~~aG~  117 (302)
                      +.+++.+.. ..+|+++.++|.
T Consensus       295 ~~~~v~~~~g~g~Dvvid~~G~  316 (447)
T 4a0s_A          295 LAKLVVEKAGREPDIVFEHTGR  316 (447)
T ss_dssp             HHHHHHHHHSSCCSEEEECSCH
T ss_pred             HHHHHHHHhCCCceEEEECCCc
Confidence            555555543 369999999984

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=97.98  E-value=3.8e-05  Score=62.14  Aligned_cols=79  Identities=13%  Similarity=0.125  Sum_probs=59.5

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecCh-hhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELGLTVILTARDV-ERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~-~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      .++.++|+|+ |.+|..+++.|.+.|++|++++++. ++.+.......   ..+.++.+|.++++.+++.      ....
T Consensus         2 ~~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~---~~~~~i~gd~~~~~~l~~a------~i~~   71 (153)
T 1id1_A            2 RKDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLG---DNADVIPGDSNDSSVLKKA------GIDR   71 (153)
T ss_dssp             CCSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHC---TTCEEEESCTTSHHHHHHH------TTTT
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhc---CCCeEEEcCCCCHHHHHHc------Chhh
Confidence            4567889986 9999999999999999999999984 54444443332   2477889999998876543      1236


Q ss_pred             ccEEEEcCCC
Q 022103          108 LDILVNNAGV  117 (302)
Q Consensus       108 id~lv~~aG~  117 (302)
                      .|.+|.+.+.
T Consensus        72 ad~vi~~~~~   81 (153)
T 1id1_A           72 CRAILALSDN   81 (153)
T ss_dssp             CSEEEECSSC
T ss_pred             CCEEEEecCC
Confidence            7999888764

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=97.94  E-value=3.8e-05  Score=71.18  Aligned_cols=99  Identities=16%  Similarity=0.232  Sum_probs=68.3

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecCh---hhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhh
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDV---ERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSN  104 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~---~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~  104 (302)
                      ++|++|+|+|+ |+||..+++.+...|++|++++++.   ++++. ++++   |.  ..+  | .+  ++.+.+.+ . .
T Consensus       179 ~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~-~~~~---ga--~~v--~-~~--~~~~~~~~-~-~  244 (366)
T 2cdc_A          179 LNCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTV-IEET---KT--NYY--N-SS--NGYDKLKD-S-V  244 (366)
T ss_dssp             STTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHH-HHHH---TC--EEE--E-CT--TCSHHHHH-H-H
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHH-HHHh---CC--cee--c-hH--HHHHHHHH-h-C
Confidence            34999999999 9999999999999999999999988   66643 3344   22  222  5 44  22222222 1 2


Q ss_pred             CCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHH-HHHhhhhhcCCCCCcEEEecCCC
Q 022103          105 FAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLT-ESLLPLFRRSPSKSRILNISSRL  168 (302)
Q Consensus       105 ~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~-~~~~~~l~~~~~~~~iv~vsS~~  168 (302)
                       +.+|++|.++|...                        .+ +.+++.|+.   .|++|+++...
T Consensus       245 -~~~d~vid~~g~~~------------------------~~~~~~~~~l~~---~G~iv~~g~~~  281 (366)
T 2cdc_A          245 -GKFDVIIDATGADV------------------------NILGNVIPLLGR---NGVLGLFGFST  281 (366)
T ss_dssp             -CCEEEEEECCCCCT------------------------HHHHHHGGGEEE---EEEEEECSCCC
T ss_pred             -CCCCEEEECCCChH------------------------HHHHHHHHHHhc---CCEEEEEecCC
Confidence             57999999999631                        22 555666654   48999987654

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=97.92  E-value=4.3e-05  Score=68.23  Aligned_cols=77  Identities=17%  Similarity=0.364  Sum_probs=59.0

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      .++++++++|+|+ ||+|++++..|++.|++|++++|+.++.++..+++...+ .+.  ..|+   +++.       +  
T Consensus       115 ~~~~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~-~~~--~~~~---~~~~-------~--  178 (272)
T 1p77_A          115 WLRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYG-NIQ--AVSM---DSIP-------L--  178 (272)
T ss_dssp             CCCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGS-CEE--EEEG---GGCC-------C--
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccC-CeE--EeeH---HHhc-------c--
Confidence            4578999999998 789999999999999999999999999888888775432 222  2333   1110       1  


Q ss_pred             CCccEEEEcCCCC
Q 022103          106 AALDILVNNAGVS  118 (302)
Q Consensus       106 g~id~lv~~aG~~  118 (302)
                      +..|+||++++..
T Consensus       179 ~~~DivIn~t~~~  191 (272)
T 1p77_A          179 QTYDLVINATSAG  191 (272)
T ss_dssp             SCCSEEEECCCC-
T ss_pred             CCCCEEEECCCCC
Confidence            4799999999864

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=97.92  E-value=5.5e-05  Score=59.43  Aligned_cols=76  Identities=20%  Similarity=0.333  Sum_probs=56.5

Q ss_pred             CcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCcc
Q 022103           30 ETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALD  109 (302)
Q Consensus        30 ~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id  109 (302)
                      +..++|+|+ |.+|..+++.|.+.|++|++++|+.++.+...+..     .+.++..|.++.+.+.+.      .....|
T Consensus         4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~-----~~~~~~~d~~~~~~l~~~------~~~~~d   71 (140)
T 1lss_A            4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEI-----DALVINGDCTKIKTLEDA------GIEDAD   71 (140)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC-----SSEEEESCTTSHHHHHHT------TTTTCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhc-----CcEEEEcCCCCHHHHHHc------CcccCC
Confidence            457899987 99999999999999999999999987665443321     345677898887765321      234789


Q ss_pred             EEEEcCCC
Q 022103          110 ILVNNAGV  117 (302)
Q Consensus       110 ~lv~~aG~  117 (302)
                      +++.+.+.
T Consensus        72 ~vi~~~~~   79 (140)
T 1lss_A           72 MYIAVTGK   79 (140)
T ss_dssp             EEEECCSC
T ss_pred             EEEEeeCC
Confidence            99998753

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=97.89  E-value=5.1e-05  Score=70.04  Aligned_cols=80  Identities=16%  Similarity=0.241  Sum_probs=59.2

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      -+|++++|+||+|+||.++++.+...|++|++++++.++++.+. ++   +...   ..|..+.+..+.+.+..   .+.
T Consensus       166 ~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~l---Ga~~---~~~~~~~~~~~~~~~~~---~~g  235 (353)
T 4dup_A          166 TEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACE-RL---GAKR---GINYRSEDFAAVIKAET---GQG  235 (353)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HH---TCSE---EEETTTSCHHHHHHHHH---SSC
T ss_pred             CCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hc---CCCE---EEeCCchHHHHHHHHHh---CCC
Confidence            36889999999999999999999999999999999998876544 33   3222   24555544333333322   357


Q ss_pred             ccEEEEcCCC
Q 022103          108 LDILVNNAGV  117 (302)
Q Consensus       108 id~lv~~aG~  117 (302)
                      +|+++.++|.
T Consensus       236 ~Dvvid~~g~  245 (353)
T 4dup_A          236 VDIILDMIGA  245 (353)
T ss_dssp             EEEEEESCCG
T ss_pred             ceEEEECCCH
Confidence            9999999985

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=97.88  E-value=0.00014  Score=65.91  Aligned_cols=101  Identities=17%  Similarity=0.065  Sum_probs=68.5

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCC--EEEEEec--ChhhHHHHHHHHhhC---CCceeEEEeeCCCHHHHHHHHHHHHhh
Q 022103           32 IAIVTGANKGIGFALVKRLAELGL--TVILTAR--DVERGQRAVESLSEK---GLPVNFFQLDVSDPSSIEAFVSWFKSN  104 (302)
Q Consensus        32 ~vlItGas~gIG~ala~~l~~~G~--~V~l~~r--~~~~~~~~~~~l~~~---~~~~~~~~~Dlt~~~~~~~~~~~~~~~  104 (302)
                      +++||||+|.+|..++..|+..|.  +++++++  +.++++.....+.+.   ..++.+.. +  +.+.           
T Consensus         2 KI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~-~--~~~a-----------   67 (303)
T 1o6z_A            2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ-G--GYED-----------   67 (303)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE-C--CGGG-----------
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe-C--CHHH-----------
Confidence            589999999999999999999885  6888998  776655434444332   22333333 2  2221           


Q ss_pred             CCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhh
Q 022103          105 FAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPL  151 (302)
Q Consensus       105 ~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~  151 (302)
                      +...|++|++||....+  ..+.   .+.+..|+.....+++.+..+
T Consensus        68 ~~~aDvVi~~ag~~~~~--g~~r---~dl~~~N~~i~~~i~~~i~~~  109 (303)
T 1o6z_A           68 TAGSDVVVITAGIPRQP--GQTR---IDLAGDNAPIMEDIQSSLDEH  109 (303)
T ss_dssp             GTTCSEEEECCCCCCCT--TCCH---HHHHHHHHHHHHHHHHHHHTT
T ss_pred             hCCCCEEEEcCCCCCCC--CCCH---HHHHHHHHHHHHHHHHHHHHH
Confidence            23789999999975432  2232   345888888888888777664

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=97.88  E-value=4e-05  Score=70.05  Aligned_cols=81  Identities=17%  Similarity=0.256  Sum_probs=57.9

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      -+|++++|+||+|+||.++++.+...|++|++++++.++++. ++++   +..   ...|..+.+..+.+.+...  ...
T Consensus       147 ~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~-~~~~---ga~---~~~~~~~~~~~~~~~~~~~--~~g  217 (334)
T 3qwb_A          147 KKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKI-AKEY---GAE---YLINASKEDILRQVLKFTN--GKG  217 (334)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHH-HHHT---TCS---EEEETTTSCHHHHHHHHTT--TSC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHc---CCc---EEEeCCCchHHHHHHHHhC--CCC
Confidence            368999999999999999999999999999999999887763 3333   322   2245555443333332221  136


Q ss_pred             ccEEEEcCCC
Q 022103          108 LDILVNNAGV  117 (302)
Q Consensus       108 id~lv~~aG~  117 (302)
                      +|++++++|.
T Consensus       218 ~D~vid~~g~  227 (334)
T 3qwb_A          218 VDASFDSVGK  227 (334)
T ss_dssp             EEEEEECCGG
T ss_pred             ceEEEECCCh
Confidence            9999999985

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=97.87  E-value=5.5e-05  Score=69.43  Aligned_cols=79  Identities=23%  Similarity=0.279  Sum_probs=57.8

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCc
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAAL  108 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~i  108 (302)
                      ++++++|+|++|+||..+++.+...|++|++++|+.++++.+. ++   +...   .+|.++.+- .+.+.++.. ...+
T Consensus       166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~-~~---ga~~---~~d~~~~~~-~~~~~~~~~-~~~~  236 (343)
T 2eih_A          166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAK-AL---GADE---TVNYTHPDW-PKEVRRLTG-GKGA  236 (343)
T ss_dssp             TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HH---TCSE---EEETTSTTH-HHHHHHHTT-TTCE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hc---CCCE---EEcCCcccH-HHHHHHHhC-CCCc
Confidence            5889999999999999999999999999999999988776553 33   3221   257766542 222222221 1379


Q ss_pred             cEEEEcCC
Q 022103          109 DILVNNAG  116 (302)
Q Consensus       109 d~lv~~aG  116 (302)
                      |++|+++|
T Consensus       237 d~vi~~~g  244 (343)
T 2eih_A          237 DKVVDHTG  244 (343)
T ss_dssp             EEEEESSC
T ss_pred             eEEEECCC
Confidence            99999999

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=97.84  E-value=0.00014  Score=66.30  Aligned_cols=104  Identities=15%  Similarity=0.180  Sum_probs=68.2

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCC--EEEEEec--ChhhHHHHHHHHhh---C-CCceeEEEeeCCCHHHHHHHHHHHHh
Q 022103           32 IAIVTGANKGIGFALVKRLAELGL--TVILTAR--DVERGQRAVESLSE---K-GLPVNFFQLDVSDPSSIEAFVSWFKS  103 (302)
Q Consensus        32 ~vlItGas~gIG~ala~~l~~~G~--~V~l~~r--~~~~~~~~~~~l~~---~-~~~~~~~~~Dlt~~~~~~~~~~~~~~  103 (302)
                      +++||||+|.+|..++..|+..|.  +++++++  +.++++..+..+.+   . +.++.+...|  |  ++.+       
T Consensus         2 KI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~--d--~l~~-------   70 (313)
T 1hye_A            2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVES--D--ENLR-------   70 (313)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEE--T--TCGG-------
T ss_pred             EEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCC--c--chHH-------
Confidence            589999999999999999999884  6888998  66555443333322   1 1222332222  1  1111       


Q ss_pred             hCCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhh
Q 022103          104 NFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPL  151 (302)
Q Consensus       104 ~~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~  151 (302)
                      .+...|++||+||....+  ..+   ..+.+.+|+.....+++++..+
T Consensus        71 al~gaD~Vi~~Ag~~~~~--g~~---r~dl~~~N~~i~~~i~~~i~~~  113 (313)
T 1hye_A           71 IIDESDVVIITSGVPRKE--GMS---RMDLAKTNAKIVGKYAKKIAEI  113 (313)
T ss_dssp             GGTTCSEEEECCSCCCCT--TCC---HHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HhCCCCEEEECCCCCCCC--CCc---HHHHHHHHHHHHHHHHHHHHHh
Confidence            223789999999975432  223   3456899999888888888775

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=97.82  E-value=4.1e-05  Score=69.32  Aligned_cols=78  Identities=22%  Similarity=0.265  Sum_probs=57.9

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhh
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGL-TVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSN  104 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~  104 (302)
                      .++++++++|+|+ ||+|++++..|++.|+ +|++++|+.++.+..++++.....  .+     .+.+++.       +.
T Consensus       137 ~~l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~--~~-----~~~~~~~-------~~  201 (297)
T 2egg_A          137 ITLDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRS--AY-----FSLAEAE-------TR  201 (297)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSC--CE-----ECHHHHH-------HT
T ss_pred             CCCCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccC--ce-----eeHHHHH-------hh
Confidence            4578999999998 7899999999999998 999999999888888776643211  11     1222222       22


Q ss_pred             CCCccEEEEcCCCC
Q 022103          105 FAALDILVNNAGVS  118 (302)
Q Consensus       105 ~g~id~lv~~aG~~  118 (302)
                      ....|+||++++..
T Consensus       202 ~~~aDivIn~t~~~  215 (297)
T 2egg_A          202 LAEYDIIINTTSVG  215 (297)
T ss_dssp             GGGCSEEEECSCTT
T ss_pred             hccCCEEEECCCCC
Confidence            34689999999864

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=97.81  E-value=5.6e-05  Score=68.84  Aligned_cols=81  Identities=19%  Similarity=0.198  Sum_probs=58.4

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      -+|++++|+||+|+||..+++.+...|++|++++++.++++.+. ++   |..   ...|.++.+..+.+.+...  ...
T Consensus       139 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~---Ga~---~~~~~~~~~~~~~~~~~~~--~~g  209 (325)
T 3jyn_A          139 KPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAK-AL---GAW---ETIDYSHEDVAKRVLELTD--GKK  209 (325)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HH---TCS---EEEETTTSCHHHHHHHHTT--TCC
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc---CCC---EEEeCCCccHHHHHHHHhC--CCC
Confidence            35899999999999999999999999999999999988876543 33   222   2245555443333333221  136


Q ss_pred             ccEEEEcCCC
Q 022103          108 LDILVNNAGV  117 (302)
Q Consensus       108 id~lv~~aG~  117 (302)
                      +|+++.++|.
T Consensus       210 ~Dvvid~~g~  219 (325)
T 3jyn_A          210 CPVVYDGVGQ  219 (325)
T ss_dssp             EEEEEESSCG
T ss_pred             ceEEEECCCh
Confidence            9999999995

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=97.75  E-value=6.6e-05  Score=68.80  Aligned_cols=81  Identities=16%  Similarity=0.263  Sum_probs=58.0

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      -+|++|+|+|++|+||..+++.+...|++|++++++.++++.+.+ +   +...   ..|..+.+..+.+.+...  ...
T Consensus       143 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-l---ga~~---~~~~~~~~~~~~~~~~~~--~~g  213 (340)
T 3gms_A          143 QRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLR-L---GAAY---VIDTSTAPLYETVMELTN--GIG  213 (340)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH-H---TCSE---EEETTTSCHHHHHHHHTT--TSC
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-C---CCcE---EEeCCcccHHHHHHHHhC--CCC
Confidence            358899999999999999999998899999999999888765543 3   3222   235555443333332221  136


Q ss_pred             ccEEEEcCCC
Q 022103          108 LDILVNNAGV  117 (302)
Q Consensus       108 id~lv~~aG~  117 (302)
                      +|+++.++|.
T Consensus       214 ~Dvvid~~g~  223 (340)
T 3gms_A          214 ADAAIDSIGG  223 (340)
T ss_dssp             EEEEEESSCH
T ss_pred             CcEEEECCCC
Confidence            9999999986

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=97.74  E-value=0.00015  Score=65.06  Aligned_cols=76  Identities=17%  Similarity=0.313  Sum_probs=59.2

Q ss_pred             cccccCcEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHh
Q 022103           25 KWWSKETIAIVTGANKGIGFALVKRLAELGL-TVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKS  103 (302)
Q Consensus        25 ~~~~~~k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~  103 (302)
                      .+++++|+++|+|+ ||+|++++..|++.|+ +|++++|+.++.++.++++...+ .+....  +.+   +.        
T Consensus       121 ~~~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~-~~~~~~--~~~---l~--------  185 (281)
T 3o8q_A          121 QVLLKGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYG-EVKAQA--FEQ---LK--------  185 (281)
T ss_dssp             TCCCTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGS-CEEEEE--GGG---CC--------
T ss_pred             CCCccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccC-CeeEee--HHH---hc--------
Confidence            35678999999998 6999999999999996 99999999999999888887543 343332  211   10        


Q ss_pred             hCCCccEEEEcCCC
Q 022103          104 NFAALDILVNNAGV  117 (302)
Q Consensus       104 ~~g~id~lv~~aG~  117 (302)
                        ...|+||++...
T Consensus       186 --~~aDiIInaTp~  197 (281)
T 3o8q_A          186 --QSYDVIINSTSA  197 (281)
T ss_dssp             --SCEEEEEECSCC
T ss_pred             --CCCCEEEEcCcC
Confidence              368999998764

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=97.72  E-value=3.8e-05  Score=62.29  Aligned_cols=83  Identities=11%  Similarity=0.083  Sum_probs=57.9

Q ss_pred             cccccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHH
Q 022103           23 STKWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFK  102 (302)
Q Consensus        23 ~~~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~  102 (302)
                      +++....+++++|.|+ |.+|..+++.|.+.|++|++++|+.++.+...+   ..  ...++..|.++.+.+.+.     
T Consensus        12 ~~~~~~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~---~~--g~~~~~~d~~~~~~l~~~-----   80 (155)
T 2g1u_A           12 HMSKKQKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNS---EF--SGFTVVGDAAEFETLKEC-----   80 (155)
T ss_dssp             -----CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCT---TC--CSEEEESCTTSHHHHHTT-----
T ss_pred             hhhcccCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHh---cC--CCcEEEecCCCHHHHHHc-----
Confidence            3455677889999996 999999999999999999999999877543210   22  345677888886654321     


Q ss_pred             hhCCCccEEEEcCCC
Q 022103          103 SNFAALDILVNNAGV  117 (302)
Q Consensus       103 ~~~g~id~lv~~aG~  117 (302)
                       .....|++|.+.+.
T Consensus        81 -~~~~ad~Vi~~~~~   94 (155)
T 2g1u_A           81 -GMEKADMVFAFTND   94 (155)
T ss_dssp             -TGGGCSEEEECSSC
T ss_pred             -CcccCCEEEEEeCC
Confidence             12368999988774

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=97.71  E-value=0.00015  Score=66.46  Aligned_cols=102  Identities=17%  Similarity=0.144  Sum_probs=69.8

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCc
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAAL  108 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~i  108 (302)
                      +|++++|+|+ |+||..+++.+...|++|++++|+.++++.+. ++   +..   ...|.++.+ +.+.+.++.   +.+
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~l---Ga~---~~~d~~~~~-~~~~~~~~~---~~~  231 (339)
T 1rjw_A          164 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAK-EL---GAD---LVVNPLKED-AAKFMKEKV---GGV  231 (339)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HT---TCS---EEECTTTSC-HHHHHHHHH---SSE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HC---CCC---EEecCCCcc-HHHHHHHHh---CCC
Confidence            5889999999 88999999999999999999999988776543 33   332   224666543 222233222   579


Q ss_pred             cEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCc
Q 022103          109 DILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLG  169 (302)
Q Consensus       109 d~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~  169 (302)
                      |++|.++|..         +               ..+.+++.+++   .|+++.+++..+
T Consensus       232 d~vid~~g~~---------~---------------~~~~~~~~l~~---~G~~v~~g~~~~  265 (339)
T 1rjw_A          232 HAAVVTAVSK---------P---------------AFQSAYNSIRR---GGACVLVGLPPE  265 (339)
T ss_dssp             EEEEESSCCH---------H---------------HHHHHHHHEEE---EEEEEECCCCSS
T ss_pred             CEEEECCCCH---------H---------------HHHHHHHHhhc---CCEEEEecccCC
Confidence            9999999852         1               22344444543   489999887543

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=97.69  E-value=0.00013  Score=65.18  Aligned_cols=76  Identities=14%  Similarity=0.190  Sum_probs=58.5

Q ss_pred             cccccCcEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHh
Q 022103           25 KWWSKETIAIVTGANKGIGFALVKRLAELGL-TVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKS  103 (302)
Q Consensus        25 ~~~~~~k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~  103 (302)
                      .+++++|+++|+|+ ||+|++++..|++.|+ +|++++|+.++.++.++++..  ..+..+.  +.+..          .
T Consensus       115 ~~~l~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~--~~~~~~~--~~~l~----------~  179 (272)
T 3pwz_A          115 GEPLRNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDH--SRLRISR--YEALE----------G  179 (272)
T ss_dssp             CCCCTTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCC--TTEEEEC--SGGGT----------T
T ss_pred             CCCccCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcc--CCeeEee--HHHhc----------c
Confidence            45678999999998 6999999999999996 999999999999988888764  2333332  22211          0


Q ss_pred             hCCCccEEEEcCCC
Q 022103          104 NFAALDILVNNAGV  117 (302)
Q Consensus       104 ~~g~id~lv~~aG~  117 (302)
                        ...|+||++...
T Consensus       180 --~~~DivInaTp~  191 (272)
T 3pwz_A          180 --QSFDIVVNATSA  191 (272)
T ss_dssp             --CCCSEEEECSSG
T ss_pred             --cCCCEEEECCCC
Confidence              368999998754

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=97.68  E-value=0.00022  Score=66.16  Aligned_cols=77  Identities=25%  Similarity=0.253  Sum_probs=57.9

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      +++++|+|+|+ |++|+++++.+...|++|++++|+.++++...+....   .+.   .+..+.+++.+.+.       .
T Consensus       165 l~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~---~~~---~~~~~~~~~~~~~~-------~  230 (361)
T 1pjc_A          165 VKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGS---RVE---LLYSNSAEIETAVA-------E  230 (361)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG---GSE---EEECCHHHHHHHHH-------T
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCc---eeE---eeeCCHHHHHHHHc-------C
Confidence            66799999999 9999999999999999999999999888776654432   221   22234444443332       6


Q ss_pred             ccEEEEcCCCC
Q 022103          108 LDILVNNAGVS  118 (302)
Q Consensus       108 id~lv~~aG~~  118 (302)
                      .|++|++++..
T Consensus       231 ~DvVI~~~~~~  241 (361)
T 1pjc_A          231 ADLLIGAVLVP  241 (361)
T ss_dssp             CSEEEECCCCT
T ss_pred             CCEEEECCCcC
Confidence            89999999874

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=97.66  E-value=0.00013  Score=67.73  Aligned_cols=76  Identities=18%  Similarity=0.261  Sum_probs=57.1

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCc
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAAL  108 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~i  108 (302)
                      +|.+|+|+|+ |+||..+++.+...|++|++++++.++++...+++   |..   ...|..+.+.+++       ..+.+
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~l---Ga~---~v~~~~~~~~~~~-------~~~~~  252 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNF---GAD---SFLVSRDQEQMQA-------AAGTL  252 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTS---CCS---EEEETTCHHHHHH-------TTTCE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc---CCc---eEEeccCHHHHHH-------hhCCC
Confidence            7899999996 99999999999999999999999998877655444   322   2246666543332       22479


Q ss_pred             cEEEEcCCCC
Q 022103          109 DILVNNAGVS  118 (302)
Q Consensus       109 d~lv~~aG~~  118 (302)
                      |+++.++|..
T Consensus       253 D~vid~~g~~  262 (366)
T 1yqd_A          253 DGIIDTVSAV  262 (366)
T ss_dssp             EEEEECCSSC
T ss_pred             CEEEECCCcH
Confidence            9999999863

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=97.64  E-value=0.00021  Score=66.77  Aligned_cols=78  Identities=15%  Similarity=0.205  Sum_probs=60.1

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      .+++++++|+|+ |+||+.+++.+...|++|++++|+.++++.+.+.+.   ..+   ..+..+.+++.+.+.       
T Consensus       165 ~l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g---~~~---~~~~~~~~~l~~~l~-------  230 (377)
T 2vhw_A          165 GVEPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFC---GRI---HTRYSSAYELEGAVK-------  230 (377)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTT---TSS---EEEECCHHHHHHHHH-------
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcC---Cee---EeccCCHHHHHHHHc-------
Confidence            578999999998 999999999999999999999999988776554442   232   234455566655543       


Q ss_pred             CccEEEEcCCCC
Q 022103          107 ALDILVNNAGVS  118 (302)
Q Consensus       107 ~id~lv~~aG~~  118 (302)
                      ..|++|.+++..
T Consensus       231 ~aDvVi~~~~~p  242 (377)
T 2vhw_A          231 RADLVIGAVLVP  242 (377)
T ss_dssp             HCSEEEECCCCT
T ss_pred             CCCEEEECCCcC
Confidence            579999999864

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=97.61  E-value=0.0002  Score=65.67  Aligned_cols=80  Identities=21%  Similarity=0.229  Sum_probs=55.7

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      .+|++|+|+|++|+||..+++.+...|++|++++++.++++.+. ++   +.. .++  |..  +++.+.+.+... ...
T Consensus       158 ~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~---ga~-~v~--~~~--~~~~~~v~~~~~-~~g  227 (342)
T 4eye_A          158 RAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVK-SV---GAD-IVL--PLE--EGWAKAVREATG-GAG  227 (342)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-HH---TCS-EEE--ESS--TTHHHHHHHHTT-TSC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hc---CCc-EEe--cCc--hhHHHHHHHHhC-CCC
Confidence            35899999999999999999999999999999999988876443 33   322 222  333  223333332221 126


Q ss_pred             ccEEEEcCCC
Q 022103          108 LDILVNNAGV  117 (302)
Q Consensus       108 id~lv~~aG~  117 (302)
                      +|+++.++|.
T Consensus       228 ~Dvvid~~g~  237 (342)
T 4eye_A          228 VDMVVDPIGG  237 (342)
T ss_dssp             EEEEEESCC-
T ss_pred             ceEEEECCch
Confidence            9999999996

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=97.60  E-value=0.00017  Score=66.87  Aligned_cols=76  Identities=13%  Similarity=0.174  Sum_probs=57.8

Q ss_pred             ccccCc--EEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHh
Q 022103           26 WWSKET--IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKS  103 (302)
Q Consensus        26 ~~~~~k--~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~  103 (302)
                      .+++|+  +|+|.|+ |++|+.+++.|++ .++|.+++|+.++++...       ..+..+.+|++|.+++.++++    
T Consensus        10 ~~~~g~~mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~-------~~~~~~~~d~~d~~~l~~~~~----   76 (365)
T 3abi_A           10 HHIEGRHMKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKVK-------EFATPLKVDASNFDKLVEVMK----   76 (365)
T ss_dssp             ------CCEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHHT-------TTSEEEECCTTCHHHHHHHHT----
T ss_pred             ccccCCccEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHh-------ccCCcEEEecCCHHHHHHHHh----
Confidence            344444  6999998 9999999999975 489999999987766542       245678899999998888776    


Q ss_pred             hCCCccEEEEcCCC
Q 022103          104 NFAALDILVNNAGV  117 (302)
Q Consensus       104 ~~g~id~lv~~aG~  117 (302)
                         ..|+||++++.
T Consensus        77 ---~~DvVi~~~p~   87 (365)
T 3abi_A           77 ---EFELVIGALPG   87 (365)
T ss_dssp             ---TCSEEEECCCG
T ss_pred             ---CCCEEEEecCC
Confidence               67999999875

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=97.57  E-value=0.00027  Score=67.47  Aligned_cols=86  Identities=14%  Similarity=0.191  Sum_probs=62.4

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEE--ee--------CCCHHHHHHH
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQ--LD--------VSDPSSIEAF   97 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~--~D--------lt~~~~~~~~   97 (302)
                      -+|.+|+|+|++|+||...+..+...|++|++++++.++++.+ +++.   ....+-.  .|        ..+.++++++
T Consensus       227 ~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~-~~lG---a~~vi~~~~~d~~~~~~~~~~~~~~~~~~  302 (456)
T 3krt_A          227 KQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEIC-RAMG---AEAIIDRNAEGYRFWKDENTQDPKEWKRF  302 (456)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHHT---CCEEEETTTTTCCSEEETTEECHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHH-HhhC---CcEEEecCcCcccccccccccchHHHHHH
Confidence            3588999999999999999999988999999999988776654 4443   2222111  11        2455666677


Q ss_pred             HHHHHhhC--CCccEEEEcCCC
Q 022103           98 VSWFKSNF--AALDILVNNAGV  117 (302)
Q Consensus        98 ~~~~~~~~--g~id~lv~~aG~  117 (302)
                      .+.+.+..  ..+|+++.++|.
T Consensus       303 ~~~i~~~t~g~g~Dvvid~~G~  324 (456)
T 3krt_A          303 GKRIRELTGGEDIDIVFEHPGR  324 (456)
T ss_dssp             HHHHHHHHTSCCEEEEEECSCH
T ss_pred             HHHHHHHhCCCCCcEEEEcCCc
Confidence            77776643  379999999984

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=97.56  E-value=0.00037  Score=63.95  Aligned_cols=79  Identities=16%  Similarity=0.164  Sum_probs=56.5

Q ss_pred             CcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCcc
Q 022103           30 ETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALD  109 (302)
Q Consensus        30 ~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id  109 (302)
                      +++++|+||+|+||...++.+...|++|++++++.++++.+. ++   |..   ...|..+.+..+.+.+....  ..+|
T Consensus       165 ~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~~---Ga~---~~~~~~~~~~~~~v~~~~~~--~g~D  235 (349)
T 3pi7_A          165 EKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLK-DI---GAA---HVLNEKAPDFEATLREVMKA--EQPR  235 (349)
T ss_dssp             CSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHH-HH---TCS---EEEETTSTTHHHHHHHHHHH--HCCC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc---CCC---EEEECCcHHHHHHHHHHhcC--CCCc
Confidence            389999999999999999999989999999999998876553 34   322   12355554433333332222  2699


Q ss_pred             EEEEcCCC
Q 022103          110 ILVNNAGV  117 (302)
Q Consensus       110 ~lv~~aG~  117 (302)
                      +++.++|.
T Consensus       236 ~vid~~g~  243 (349)
T 3pi7_A          236 IFLDAVTG  243 (349)
T ss_dssp             EEEESSCH
T ss_pred             EEEECCCC
Confidence            99999985

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.52  E-value=0.00037  Score=55.44  Aligned_cols=74  Identities=12%  Similarity=0.142  Sum_probs=57.4

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCccE
Q 022103           31 TIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDI  110 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id~  110 (302)
                      +.++|.|+ |.+|..+++.|.+.|++|+++++++++.+...+    .  .+.++.+|.++++.++++      .....|.
T Consensus         8 ~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~----~--g~~~i~gd~~~~~~l~~a------~i~~ad~   74 (140)
T 3fwz_A            8 NHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDELRE----R--GVRAVLGNAANEEIMQLA------HLECAKW   74 (140)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----T--TCEEEESCTTSHHHHHHT------TGGGCSE
T ss_pred             CCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH----c--CCCEEECCCCCHHHHHhc------CcccCCE
Confidence            45788887 789999999999999999999999987665433    2  457788999999876543      1136788


Q ss_pred             EEEcCCC
Q 022103          111 LVNNAGV  117 (302)
Q Consensus       111 lv~~aG~  117 (302)
                      +|.+.+.
T Consensus        75 vi~~~~~   81 (140)
T 3fwz_A           75 LILTIPN   81 (140)
T ss_dssp             EEECCSC
T ss_pred             EEEECCC
Confidence            8877664

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.51  E-value=0.00017  Score=59.87  Aligned_cols=80  Identities=15%  Similarity=0.114  Sum_probs=59.3

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHc-CCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhh
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAEL-GLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSN  104 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~-G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~  104 (302)
                      ..+.++.++|.|+ |.+|..+++.|.+. |++|+++++++++.+...    +.  .+.++.+|.++.+.+.++     ..
T Consensus        35 ~~~~~~~v~IiG~-G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~----~~--g~~~~~gd~~~~~~l~~~-----~~  102 (183)
T 3c85_A           35 INPGHAQVLILGM-GRIGTGAYDELRARYGKISLGIEIREEAAQQHR----SE--GRNVISGDATDPDFWERI-----LD  102 (183)
T ss_dssp             BCCTTCSEEEECC-SHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHH----HT--TCCEEECCTTCHHHHHTB-----CS
T ss_pred             cCCCCCcEEEECC-CHHHHHHHHHHHhccCCeEEEEECCHHHHHHHH----HC--CCCEEEcCCCCHHHHHhc-----cC
Confidence            3456777899985 89999999999999 999999999987765532    22  355677899988755432     01


Q ss_pred             CCCccEEEEcCCC
Q 022103          105 FAALDILVNNAGV  117 (302)
Q Consensus       105 ~g~id~lv~~aG~  117 (302)
                      ....|.+|.+.+.
T Consensus       103 ~~~ad~vi~~~~~  115 (183)
T 3c85_A          103 TGHVKLVLLAMPH  115 (183)
T ss_dssp             CCCCCEEEECCSS
T ss_pred             CCCCCEEEEeCCC
Confidence            3468999987663

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=97.51  E-value=0.00046  Score=60.75  Aligned_cols=81  Identities=19%  Similarity=0.310  Sum_probs=61.1

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecCh-------------------hhHHHHHHHHhhCCCc--eeEE
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGL-TVILTARDV-------------------ERGQRAVESLSEKGLP--VNFF   84 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~~-------------------~~~~~~~~~l~~~~~~--~~~~   84 (302)
                      .+++++|+|.|+ ||+|.++++.|++.|. ++++++++.                   .+.+.+++.+.+.+..  +..+
T Consensus        28 ~l~~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~  106 (249)
T 1jw9_B           28 ALKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPV  106 (249)
T ss_dssp             HHHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred             HHhCCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEE
Confidence            367889999997 7899999999999997 899999987                   7778887888765544  4455


Q ss_pred             EeeCCCHHHHHHHHHHHHhhCCCccEEEEcCC
Q 022103           85 QLDVSDPSSIEAFVSWFKSNFAALDILVNNAG  116 (302)
Q Consensus        85 ~~Dlt~~~~~~~~~~~~~~~~g~id~lv~~aG  116 (302)
                      ..++++ +.+.++++       ..|+||.+..
T Consensus       107 ~~~~~~-~~~~~~~~-------~~DvVi~~~d  130 (249)
T 1jw9_B          107 NALLDD-AELAALIA-------EHDLVLDCTD  130 (249)
T ss_dssp             CSCCCH-HHHHHHHH-------TSSEEEECCS
T ss_pred             eccCCH-hHHHHHHh-------CCCEEEEeCC
Confidence            555653 34444433       6899998764

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=97.50  E-value=0.00024  Score=65.75  Aligned_cols=80  Identities=18%  Similarity=0.150  Sum_probs=56.7

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      .+|++++|+||+|+||..+++.+...|++|++++++.++++.+.+ +   |...   ..|..+.+ +.+.+.+..  .+.
T Consensus       162 ~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~-~---Ga~~---~~~~~~~~-~~~~~~~~~--~~g  231 (362)
T 2c0c_A          162 SEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKS-L---GCDR---PINYKTEP-VGTVLKQEY--PEG  231 (362)
T ss_dssp             CTTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-T---TCSE---EEETTTSC-HHHHHHHHC--TTC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH-c---CCcE---EEecCChh-HHHHHHHhc--CCC
Confidence            358899999999999999999999999999999999877665432 3   3332   23444432 333333332  146


Q ss_pred             ccEEEEcCCC
Q 022103          108 LDILVNNAGV  117 (302)
Q Consensus       108 id~lv~~aG~  117 (302)
                      +|++|.++|.
T Consensus       232 ~D~vid~~g~  241 (362)
T 2c0c_A          232 VDVVYESVGG  241 (362)
T ss_dssp             EEEEEECSCT
T ss_pred             CCEEEECCCH
Confidence            9999999984

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.50  E-value=9.1e-05  Score=59.27  Aligned_cols=71  Identities=8%  Similarity=0.217  Sum_probs=54.2

Q ss_pred             CcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCcc
Q 022103           30 ETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALD  109 (302)
Q Consensus        30 ~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id  109 (302)
                      +++++|.|+ |++|+.+++.|.+.|++|++++|+.++.+...+++.     ...  .+..+.+   +.+.       ..|
T Consensus        21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~-----~~~--~~~~~~~---~~~~-------~~D   82 (144)
T 3oj0_A           21 GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYE-----YEY--VLINDID---SLIK-------NND   82 (144)
T ss_dssp             CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHT-----CEE--EECSCHH---HHHH-------TCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhC-----Cce--EeecCHH---HHhc-------CCC
Confidence            889999997 999999999999999999999999998887777653     111  1233332   2333       579


Q ss_pred             EEEEcCCCC
Q 022103          110 ILVNNAGVS  118 (302)
Q Consensus       110 ~lv~~aG~~  118 (302)
                      ++|.+.+..
T Consensus        83 ivi~at~~~   91 (144)
T 3oj0_A           83 VIITATSSK   91 (144)
T ss_dssp             EEEECSCCS
T ss_pred             EEEEeCCCC
Confidence            999998764

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=97.47  E-value=0.00048  Score=63.14  Aligned_cols=77  Identities=16%  Similarity=0.241  Sum_probs=53.8

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCc
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAAL  108 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~i  108 (302)
                      +|++++|+||+|+||..+++.+...|++|+++ ++.++++.+ +++   |..  .  .| .+.+ +.+.+.+... ...+
T Consensus       150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~-~~l---Ga~--~--i~-~~~~-~~~~~~~~~~-~~g~  217 (343)
T 3gaz_A          150 DGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYV-RDL---GAT--P--ID-ASRE-PEDYAAEHTA-GQGF  217 (343)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHH-HHH---TSE--E--EE-TTSC-HHHHHHHHHT-TSCE
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHH-HHc---CCC--E--ec-cCCC-HHHHHHHHhc-CCCc
Confidence            58899999999999999999999999999998 777765543 444   322  2  44 3333 3333333222 1369


Q ss_pred             cEEEEcCCC
Q 022103          109 DILVNNAGV  117 (302)
Q Consensus       109 d~lv~~aG~  117 (302)
                      |+++.++|.
T Consensus       218 D~vid~~g~  226 (343)
T 3gaz_A          218 DLVYDTLGG  226 (343)
T ss_dssp             EEEEESSCT
T ss_pred             eEEEECCCc
Confidence            999999984

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=97.46  E-value=0.00062  Score=62.43  Aligned_cols=78  Identities=15%  Similarity=0.173  Sum_probs=55.9

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCc
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAAL  108 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~i  108 (302)
                      +|++++|+||+|+||...++.+...|++|++++++.++++.+.+ +.   ... +  .|..+  ++.+.+.+.  ..+.+
T Consensus       150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~-lG---a~~-v--i~~~~--~~~~~~~~~--~~~g~  218 (346)
T 3fbg_A          150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKK-MG---ADI-V--LNHKE--SLLNQFKTQ--GIELV  218 (346)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHH-HT---CSE-E--ECTTS--CHHHHHHHH--TCCCE
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-cC---CcE-E--EECCc--cHHHHHHHh--CCCCc
Confidence            68999999999999999999999999999999999877665443 43   221 1  23332  233333333  22479


Q ss_pred             cEEEEcCCC
Q 022103          109 DILVNNAGV  117 (302)
Q Consensus       109 d~lv~~aG~  117 (302)
                      |+++.++|.
T Consensus       219 Dvv~d~~g~  227 (346)
T 3fbg_A          219 DYVFCTFNT  227 (346)
T ss_dssp             EEEEESSCH
T ss_pred             cEEEECCCc
Confidence            999999885

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=97.40  E-value=0.0004  Score=62.40  Aligned_cols=75  Identities=19%  Similarity=0.218  Sum_probs=54.3

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      -+|++++|+|++|++|..+++.+...|++|++++++.++++.+ +++   |...   ..|..+.+++   .+.+    +.
T Consensus       124 ~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~---ga~~---~~~~~~~~~~---~~~~----~~  189 (302)
T 1iz0_A          124 RPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALP-LAL---GAEE---AATYAEVPER---AKAW----GG  189 (302)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHH-HHT---TCSE---EEEGGGHHHH---HHHT----TS
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-Hhc---CCCE---EEECCcchhH---HHHh----cC
Confidence            3689999999999999999999999999999999998877654 333   3221   2355441222   2222    47


Q ss_pred             ccEEEEcCCC
Q 022103          108 LDILVNNAGV  117 (302)
Q Consensus       108 id~lv~~aG~  117 (302)
                      +|+++. +|.
T Consensus       190 ~d~vid-~g~  198 (302)
T 1iz0_A          190 LDLVLE-VRG  198 (302)
T ss_dssp             EEEEEE-CSC
T ss_pred             ceEEEE-CCH
Confidence            999999 885

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=97.38  E-value=0.00068  Score=62.17  Aligned_cols=104  Identities=15%  Similarity=0.165  Sum_probs=68.6

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELGL-TVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      +|.+++|+|+ |+||..+++.+...|+ +|++++++.++++.+. ++.   ..   ...|..+.+ +.+.+.++.. ...
T Consensus       167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~-~~G---a~---~~~~~~~~~-~~~~v~~~~~-g~g  236 (348)
T 2d8a_A          167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAK-KVG---AD---YVINPFEED-VVKEVMDITD-GNG  236 (348)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHH-HHT---CS---EEECTTTSC-HHHHHHHHTT-TSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HhC---CC---EEECCCCcC-HHHHHHHHcC-CCC
Confidence            7899999999 9999999999998999 8999999987766443 442   22   123544433 2222222211 126


Q ss_pred             ccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCc
Q 022103          108 LDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLG  169 (302)
Q Consensus       108 id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~  169 (302)
                      +|++|.++|..         +               ..+.+++.++.   .|+++.+++..+
T Consensus       237 ~D~vid~~g~~---------~---------------~~~~~~~~l~~---~G~iv~~g~~~~  271 (348)
T 2d8a_A          237 VDVFLEFSGAP---------K---------------ALEQGLQAVTP---AGRVSLLGLYPG  271 (348)
T ss_dssp             EEEEEECSCCH---------H---------------HHHHHHHHEEE---EEEEEECCCCSS
T ss_pred             CCEEEECCCCH---------H---------------HHHHHHHHHhc---CCEEEEEccCCC
Confidence            99999999851         1               23444455544   489999987543

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=97.35  E-value=0.00052  Score=58.65  Aligned_cols=74  Identities=15%  Similarity=0.187  Sum_probs=58.4

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCccEE
Q 022103           32 IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDIL  111 (302)
Q Consensus        32 ~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id~l  111 (302)
                      .++|+|+ |.+|..+++.|.++|++|+++++++++.+...+..     .+.++.+|.++++.+++.      .....|++
T Consensus         2 ~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~-----~~~~i~gd~~~~~~l~~a------~i~~ad~v   69 (218)
T 3l4b_C            2 KVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKL-----KATIIHGDGSHKEILRDA------EVSKNDVV   69 (218)
T ss_dssp             CEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHS-----SSEEEESCTTSHHHHHHH------TCCTTCEE
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHc-----CCeEEEcCCCCHHHHHhc------CcccCCEE
Confidence            3889997 88999999999999999999999998776554432     457899999998876543      12468999


Q ss_pred             EEcCCC
Q 022103          112 VNNAGV  117 (302)
Q Consensus       112 v~~aG~  117 (302)
                      |.+.+.
T Consensus        70 i~~~~~   75 (218)
T 3l4b_C           70 VILTPR   75 (218)
T ss_dssp             EECCSC
T ss_pred             EEecCC
Confidence            877654

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=97.34  E-value=0.00056  Score=62.22  Aligned_cols=93  Identities=13%  Similarity=0.072  Sum_probs=60.8

Q ss_pred             cccCcE-EEEeCCCc-----------------h-HHHHHHHHHHHcCCEEEEEecChhhH--------HHHHHHHhh---
Q 022103           27 WSKETI-AIVTGANK-----------------G-IGFALVKRLAELGLTVILTARDVERG--------QRAVESLSE---   76 (302)
Q Consensus        27 ~~~~k~-vlItGas~-----------------g-IG~ala~~l~~~G~~V~l~~r~~~~~--------~~~~~~l~~---   76 (302)
                      ++.||+ ||||+|+.                 | .|.++|+.++++|+.|+++.+...-.        ....+.+..   
T Consensus        33 ~l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~sl~p~~r~~~~~~~~~~~~~~~~  112 (313)
T 1p9o_A           33 GAQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRARSAFPYAHRFPPQTWLSALRPSGP  112 (313)
T ss_dssp             HHTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETTSCCTTGGGSCHHHHHHHCEECCC
T ss_pred             hhcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCCCcCcchhccCccchhhhhccccc
Confidence            467888 99998865                 5 99999999999999999998853210        001111111   


Q ss_pred             CCCceeEEEeeCCCHHHHHHHHHHH------------------------------HhhCCCccEEEEcCCCCC
Q 022103           77 KGLPVNFFQLDVSDPSSIEAFVSWF------------------------------KSNFAALDILVNNAGVSF  119 (302)
Q Consensus        77 ~~~~~~~~~~Dlt~~~~~~~~~~~~------------------------------~~~~g~id~lv~~aG~~~  119 (302)
                      ....+..+..|+...+++.+.+...                              .+.++..|++|++|+++.
T Consensus       113 ~~~~~~~i~v~v~sa~~m~~av~~~~~~~~~~~l~~i~f~tv~eyl~~L~~~~~~l~~~~~~di~i~aAAVsD  185 (313)
T 1p9o_A          113 ALSGLLSLEAEENALPGFAEALRSYQEAAAAGTFLVVEFTTLADYLHLLQAAAQALNPLGPSAMFYLAAAVSD  185 (313)
T ss_dssp             -CCSEEEEEEETTTSTTHHHHHHHHHHHHHHTCEEEEEECBHHHHHHHHHHHHHHHGGGGGGEEEEECSBCCS
T ss_pred             cccccceeeeccccHHHHHHHHHHHhhhhccccceeeccccHHHHHHHHHHhhHHhhccCCCCEEEECCchhh
Confidence            1122345566666555555555432                              234578999999999874

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=97.28  E-value=0.00093  Score=62.91  Aligned_cols=74  Identities=19%  Similarity=0.319  Sum_probs=55.8

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGL-TVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      +++|++++|.|+ |++|+.+++.|...|+ +|++++|+.++.++.++++.   ..  .  .+.   +++.+.+.      
T Consensus       164 ~l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g---~~--~--~~~---~~l~~~l~------  226 (404)
T 1gpj_A          164 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLG---GE--A--VRF---DELVDHLA------  226 (404)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHT---CE--E--CCG---GGHHHHHH------
T ss_pred             cccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcC---Cc--e--ecH---HhHHHHhc------
Confidence            468999999998 9999999999999999 89999999988766666653   21  1  222   23333332      


Q ss_pred             CCccEEEEcCCCC
Q 022103          106 AALDILVNNAGVS  118 (302)
Q Consensus       106 g~id~lv~~aG~~  118 (302)
                       ..|+||.+.|..
T Consensus       227 -~aDvVi~at~~~  238 (404)
T 1gpj_A          227 -RSDVVVSATAAP  238 (404)
T ss_dssp             -TCSEEEECCSSS
T ss_pred             -CCCEEEEccCCC
Confidence             689999998753

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=97.25  E-value=0.0018  Score=59.37  Aligned_cols=82  Identities=23%  Similarity=0.229  Sum_probs=54.5

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCC-HHHHHHHHHHHHh-hC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSD-PSSIEAFVSWFKS-NF  105 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~-~~~~~~~~~~~~~-~~  105 (302)
                      -+|.+|+|+|+ |++|...++.+...|++|++++++.++++.+ +++   |.. .  ..|..+ .+..+++.+.... ..
T Consensus       167 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~-~~l---Ga~-~--~~~~~~~~~~~~~i~~~~~~~~g  238 (352)
T 1e3j_A          167 QLGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVA-KNC---GAD-V--TLVVDPAKEEESSIIERIRSAIG  238 (352)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHT---TCS-E--EEECCTTTSCHHHHHHHHHHHSS
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHh---CCC-E--EEcCcccccHHHHHHHHhccccC
Confidence            35889999997 8999999998888999999999998776644 333   333 2  234443 2222222222210 12


Q ss_pred             CCccEEEEcCCC
Q 022103          106 AALDILVNNAGV  117 (302)
Q Consensus       106 g~id~lv~~aG~  117 (302)
                      ..+|+++.++|.
T Consensus       239 ~g~D~vid~~g~  250 (352)
T 1e3j_A          239 DLPNVTIDCSGN  250 (352)
T ss_dssp             SCCSEEEECSCC
T ss_pred             CCCCEEEECCCC
Confidence            369999999985

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=97.24  E-value=0.0018  Score=58.29  Aligned_cols=103  Identities=13%  Similarity=0.212  Sum_probs=64.8

Q ss_pred             cCCCCCccccccccc-------ccCcEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecCh------------------hh
Q 022103           13 SSSSSSSLVSSTKWW-------SKETIAIVTGANKGIGFALVKRLAELGL-TVILTARDV------------------ER   66 (302)
Q Consensus        13 ~~~~~~~~~~~~~~~-------~~~k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~~------------------~~   66 (302)
                      +...++++..-..|.       +++++|+|.|+ ||+|.++++.|++.|. ++.+++++.                  .|
T Consensus        12 ~~~~y~r~i~L~~~G~~~~q~kL~~~~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~K   90 (292)
T 3h8v_A           12 SGLVPRGSMALKRMGIVSDYEKIRTFAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSK   90 (292)
T ss_dssp             --------------------CGGGGCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBH
T ss_pred             CCCCchHhhcccccChHHHHHHHhCCeEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchH
Confidence            334455554444443       46789999998 7899999999999996 799998876                  56


Q ss_pred             HHHHHHHHhhCCCc--eeEEEeeCCCHHHHHHHHHHHHhh----CCCccEEEEcCC
Q 022103           67 GQRAVESLSEKGLP--VNFFQLDVSDPSSIEAFVSWFKSN----FAALDILVNNAG  116 (302)
Q Consensus        67 ~~~~~~~l~~~~~~--~~~~~~Dlt~~~~~~~~~~~~~~~----~g~id~lv~~aG  116 (302)
                      .+.+.+.+.+.+..  +..+..++++.+.+..+++.+...    ....|+||.+.-
T Consensus        91 a~aa~~~L~~iNP~v~v~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~D  146 (292)
T 3h8v_A           91 VQAAEHTLRNINPDVLFEVHNYNITTVENFQHFMDRISNGGLEEGKPVDLVLSCVD  146 (292)
T ss_dssp             HHHHHHHHHHHCTTSEEEEECCCTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECCS
T ss_pred             HHHHHHHHHhhCCCcEEEEecccCCcHHHHHHHhhhhcccccccCCCCCEEEECCc
Confidence            66677777666554  456667777777777777655321    136888886543

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=97.22  E-value=0.0023  Score=58.61  Aligned_cols=78  Identities=14%  Similarity=0.183  Sum_probs=56.2

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCC--EEEEEecChhhHHHHHHHHhhCC---CceeEEEeeCCCHHHHHHHHHHH
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGL--TVILTARDVERGQRAVESLSEKG---LPVNFFQLDVSDPSSIEAFVSWF  101 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~--~V~l~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dlt~~~~~~~~~~~~  101 (302)
                      +.+++.+.|+|+ |.+|.+++..|+..|.  +|++++++.++++..+..+.+..   ..+.+...   +.+         
T Consensus         6 ~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~---~~~---------   72 (326)
T 3vku_A            6 DKDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSA---EYS---------   72 (326)
T ss_dssp             -CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEEC---CGG---------
T ss_pred             cCCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEEC---cHH---------
Confidence            345678999996 9999999999999987  89999999988887766666432   12233322   222         


Q ss_pred             HhhCCCccEEEEcCCCCC
Q 022103          102 KSNFAALDILVNNAGVSF  119 (302)
Q Consensus       102 ~~~~g~id~lv~~aG~~~  119 (302)
                        .+...|++|.+||...
T Consensus        73 --a~~~aDiVvi~ag~~~   88 (326)
T 3vku_A           73 --DAKDADLVVITAGAPQ   88 (326)
T ss_dssp             --GGTTCSEEEECCCCC-
T ss_pred             --HhcCCCEEEECCCCCC
Confidence              2347899999999753

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=97.17  E-value=0.0055  Score=56.06  Aligned_cols=113  Identities=16%  Similarity=0.129  Sum_probs=72.9

Q ss_pred             CcEEEEeCCCchHHHHHHHHHHHcCC--EEEEEecChhhHHHHHHHHhhCC----CceeEEEeeCCCHHHHHHHHHHHHh
Q 022103           30 ETIAIVTGANKGIGFALVKRLAELGL--TVILTARDVERGQRAVESLSEKG----LPVNFFQLDVSDPSSIEAFVSWFKS  103 (302)
Q Consensus        30 ~k~vlItGas~gIG~ala~~l~~~G~--~V~l~~r~~~~~~~~~~~l~~~~----~~~~~~~~Dlt~~~~~~~~~~~~~~  103 (302)
                      .+.+.|+|+ |.+|.++|..|+..|.  +|++++++.++++..+..+++..    ..+.++..|   .+           
T Consensus         5 ~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~---~~-----------   69 (326)
T 3pqe_A            5 VNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGT---YE-----------   69 (326)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEEC---GG-----------
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCc---HH-----------
Confidence            467999996 9999999999999997  89999999888877666665431    233333222   11           


Q ss_pred             hCCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecC
Q 022103          104 NFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISS  166 (302)
Q Consensus       104 ~~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS  166 (302)
                      .+...|++|.++|....+  ..+   -.+.+..|..-...+.+.+..+    ...+.++++|-
T Consensus        70 a~~~aDvVvi~ag~p~kp--G~~---R~dL~~~N~~Iv~~i~~~I~~~----~p~a~vlvvtN  123 (326)
T 3pqe_A           70 DCKDADIVCICAGANQKP--GET---RLELVEKNLKIFKGIVSEVMAS----GFDGIFLVATN  123 (326)
T ss_dssp             GGTTCSEEEECCSCCCCT--TCC---HHHHHHHHHHHHHHHHHHHHHT----TCCSEEEECSS
T ss_pred             HhCCCCEEEEecccCCCC--Ccc---HHHHHHHHHHHHHHHHHHHHHh----cCCeEEEEcCC
Confidence            224789999999975332  223   3345666665544454444443    23456666653

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=97.17  E-value=0.00099  Score=61.44  Aligned_cols=105  Identities=20%  Similarity=0.206  Sum_probs=66.1

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCC--EEEEEecChhhHHHHHHHHhhCC---CceeEEEeeCCCHHHHHHHHHHHH
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGL--TVILTARDVERGQRAVESLSEKG---LPVNFFQLDVSDPSSIEAFVSWFK  102 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~--~V~l~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dlt~~~~~~~~~~~~~  102 (302)
                      ++++.+.|+|++|.+|..+|..++..|.  +|++++.+.++++..+..+.+..   .++.+ .   +|.   .+.+    
T Consensus         6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~~-t---~d~---~~al----   74 (343)
T 3fi9_A            6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLTF-T---SDI---KEAL----   74 (343)
T ss_dssp             SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCEE-E---SCH---HHHH----
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceEE-c---CCH---HHHh----
Confidence            5567899999999999999999999984  79999999887776655555421   11111 1   122   2222    


Q ss_pred             hhCCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhh
Q 022103          103 SNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPL  151 (302)
Q Consensus       103 ~~~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~  151 (302)
                         ...|++|.+||....+  ..+   ..+.+..|..-...+.+.+..+
T Consensus        75 ---~dADvVvitaG~p~kp--G~~---R~dLl~~N~~I~~~i~~~i~~~  115 (343)
T 3fi9_A           75 ---TDAKYIVSSGGAPRKE--GMT---REDLLKGNAEIAAQLGKDIKSY  115 (343)
T ss_dssp             ---TTEEEEEECCC---------C---HHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ---CCCCEEEEccCCCCCC--CCC---HHHHHHHHHHHHHHHHHHHHHh
Confidence               2689999999975321  122   3455667765555555555443

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=97.16  E-value=0.0014  Score=60.77  Aligned_cols=77  Identities=18%  Similarity=0.281  Sum_probs=53.4

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      -+|++++|+||+|+||..+++.+...|++|++++ +.++++.+ +++   |...   ..|..+.+..    +.+.+ .+.
T Consensus       182 ~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~~~~-~~l---Ga~~---v~~~~~~~~~----~~~~~-~~g  248 (375)
T 2vn8_A          182 CTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDASELV-RKL---GADD---VIDYKSGSVE----EQLKS-LKP  248 (375)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHH-HHT---TCSE---EEETTSSCHH----HHHHT-SCC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHHHHH-HHc---CCCE---EEECCchHHH----HHHhh-cCC
Confidence            3588999999999999999999888999999888 45554433 443   3332   2355543322    22332 257


Q ss_pred             ccEEEEcCCC
Q 022103          108 LDILVNNAGV  117 (302)
Q Consensus       108 id~lv~~aG~  117 (302)
                      +|+++.++|.
T Consensus       249 ~D~vid~~g~  258 (375)
T 2vn8_A          249 FDFILDNVGG  258 (375)
T ss_dssp             BSEEEESSCT
T ss_pred             CCEEEECCCC
Confidence            9999999996

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=97.16  E-value=0.00066  Score=62.41  Aligned_cols=117  Identities=18%  Similarity=0.214  Sum_probs=73.2

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHcCC--E-----EEEEecCh--hhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHH
Q 022103           31 TIAIVTGANKGIGFALVKRLAELGL--T-----VILTARDV--ERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWF  101 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~G~--~-----V~l~~r~~--~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~  101 (302)
                      .+|+||||+|.||..++..|+..|.  +     ++++++..  ++++..+..+.+...... .....++  +..+     
T Consensus         4 ~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~~-~~~~~~~--~~~~-----   75 (333)
T 5mdh_A            4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLL-KDVIATD--KEEI-----   75 (333)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTE-EEEEEES--CHHH-----
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhccc-CCEEEcC--CcHH-----
Confidence            5799999999999999999998875  4     89999974  455666666665321211 1111211  1111     


Q ss_pred             HhhCCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCC-cEEEecC
Q 022103          102 KSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKS-RILNISS  166 (302)
Q Consensus       102 ~~~~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~-~iv~vsS  166 (302)
                        .+...|++|+.||....+  ..+   ..+.++.|......+.+.+..+-    ..+ .|+++|-
T Consensus        76 --~~~daDvVvitAg~prkp--G~t---R~dll~~N~~i~~~i~~~i~~~~----~~~~~vivvsN  130 (333)
T 5mdh_A           76 --AFKDLDVAILVGSMPRRD--GME---RKDLLKANVKIFKCQGAALDKYA----KKSVKVIVVGN  130 (333)
T ss_dssp             --HTTTCSEEEECCSCCCCT--TCC---TTTTHHHHHHHHHHHHHHHHHHS----CTTCEEEECSS
T ss_pred             --HhCCCCEEEEeCCCCCCC--CCC---HHHHHHHHHHHHHHHHHHHHHhC----CCCeEEEEcCC
Confidence              123789999999975432  122   34457778777666666665541    234 4776664

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=97.15  E-value=0.00077  Score=61.67  Aligned_cols=77  Identities=14%  Similarity=0.172  Sum_probs=54.2

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELGL-TVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      +|.+++|+|+ |++|..+++.+...|+ +|++++++.++++.+.+ + .   .   ...|..+. ++.+.+.++.  ...
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~-l-a---~---~v~~~~~~-~~~~~~~~~~--~~g  231 (343)
T 2dq4_A          164 SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFARP-Y-A---D---RLVNPLEE-DLLEVVRRVT--GSG  231 (343)
T ss_dssp             TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTT-T-C---S---EEECTTTS-CHHHHHHHHH--SSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-h-H---H---hccCcCcc-CHHHHHHHhc--CCC
Confidence            7899999999 9999999998888999 89999999877553322 1 1   1   12344443 2333333332  246


Q ss_pred             ccEEEEcCCC
Q 022103          108 LDILVNNAGV  117 (302)
Q Consensus       108 id~lv~~aG~  117 (302)
                      +|+++.++|.
T Consensus       232 ~D~vid~~g~  241 (343)
T 2dq4_A          232 VEVLLEFSGN  241 (343)
T ss_dssp             EEEEEECSCC
T ss_pred             CCEEEECCCC
Confidence            9999999985

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=97.13  E-value=0.0027  Score=58.37  Aligned_cols=84  Identities=15%  Similarity=0.081  Sum_probs=60.0

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCE-EEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLT-VILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~-V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      -+|.+|+|.|+ |++|...++.+...|++ |++++++.++++.+.+ +   ...+..+..|-.+.+++.+.+.+.-. ..
T Consensus       178 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~-l---~~~~~~~~~~~~~~~~~~~~v~~~t~-g~  251 (363)
T 3m6i_A          178 RLGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFAKE-I---CPEVVTHKVERLSAEESAKKIVESFG-GI  251 (363)
T ss_dssp             CTTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHH-H---CTTCEEEECCSCCHHHHHHHHHHHTS-SC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-h---chhcccccccccchHHHHHHHHHHhC-CC
Confidence            35889999998 99999999888888997 9999999888765543 3   22444455555555655544443321 23


Q ss_pred             CccEEEEcCCC
Q 022103          107 ALDILVNNAGV  117 (302)
Q Consensus       107 ~id~lv~~aG~  117 (302)
                      .+|+++.++|.
T Consensus       252 g~Dvvid~~g~  262 (363)
T 3m6i_A          252 EPAVALECTGV  262 (363)
T ss_dssp             CCSEEEECSCC
T ss_pred             CCCEEEECCCC
Confidence            69999999986

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=97.11  E-value=0.005  Score=55.93  Aligned_cols=115  Identities=22%  Similarity=0.141  Sum_probs=68.2

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcC--CEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCcc
Q 022103           32 IAIVTGANKGIGFALVKRLAELG--LTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALD  109 (302)
Q Consensus        32 ~vlItGas~gIG~ala~~l~~~G--~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id  109 (302)
                      .+.|+|++|.+|..++..|+..|  .+|++++++.  .+..+..+.+......+....  ..++.++.++       ..|
T Consensus         2 KI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~--~~~~a~dL~~~~~~~~l~~~~--~t~d~~~a~~-------~aD   70 (314)
T 1mld_A            2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH--TPGVAADLSHIETRATVKGYL--GPEQLPDCLK-------GCD   70 (314)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS--HHHHHHHHTTSSSSCEEEEEE--SGGGHHHHHT-------TCS
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc--cHHHHHHHhccCcCceEEEec--CCCCHHHHhC-------CCC
Confidence            48999999999999999999988  6899999987  333444554432121111100  0122332333       689


Q ss_pred             EEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecC
Q 022103          110 ILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISS  166 (302)
Q Consensus       110 ~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS  166 (302)
                      ++|+++|....+  ..+.   .+.+..|+.....+++.+..+.    ..+.|+++|-
T Consensus        71 vVvi~ag~~~~~--g~~r---~dl~~~n~~i~~~i~~~i~~~~----p~a~viv~sN  118 (314)
T 1mld_A           71 VVVIPAGVPRKP--GMTR---DDLFNTNATIVATLTAACAQHC----PDAMICIISN  118 (314)
T ss_dssp             EEEECCSCCCCT--TCCG---GGGHHHHHHHHHHHHHHHHHHC----TTSEEEECSS
T ss_pred             EEEECCCcCCCC--CCcH---HHHHHHHHHHHHHHHHHHHhhC----CCeEEEEECC
Confidence            999999986432  1221   2235666665555555554432    2356666554

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=97.11  E-value=0.0021  Score=59.28  Aligned_cols=79  Identities=19%  Similarity=0.150  Sum_probs=55.4

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCc
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAAL  108 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~i  108 (302)
                      +|.+|+|+| +|+||...+..+...|++|++++++.++++.+ +++.   ...   ..| .+.+++.+.+.++.. ...+
T Consensus       189 ~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~-~~lG---a~~---vi~-~~~~~~~~~v~~~~~-g~g~  258 (363)
T 3uog_A          189 AGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDRA-FALG---ADH---GIN-RLEEDWVERVYALTG-DRGA  258 (363)
T ss_dssp             TTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHHT---CSE---EEE-TTTSCHHHHHHHHHT-TCCE
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHHH-HHcC---CCE---EEc-CCcccHHHHHHHHhC-CCCc
Confidence            588999999 89999999999888999999999998877653 4443   222   234 333333333333322 1269


Q ss_pred             cEEEEcCCC
Q 022103          109 DILVNNAGV  117 (302)
Q Consensus       109 d~lv~~aG~  117 (302)
                      |+++.++|.
T Consensus       259 D~vid~~g~  267 (363)
T 3uog_A          259 DHILEIAGG  267 (363)
T ss_dssp             EEEEEETTS
T ss_pred             eEEEECCCh
Confidence            999999993

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=97.09  E-value=0.0013  Score=60.50  Aligned_cols=86  Identities=16%  Similarity=0.104  Sum_probs=52.5

Q ss_pred             cC-cEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCH--HHHHHHHHHHH-hh
Q 022103           29 KE-TIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP--SSIEAFVSWFK-SN  104 (302)
Q Consensus        29 ~~-k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~--~~~~~~~~~~~-~~  104 (302)
                      +| .+|+|+|++|++|...++.+...|++|+++.++.+++.+..+.+.+.|.... +  |..+.  +++.+.+.++- ..
T Consensus       166 ~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~v-i--~~~~~~~~~~~~~i~~~t~~~  242 (364)
T 1gu7_A          166 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQV-I--TEDQNNSREFGPTIKEWIKQS  242 (364)
T ss_dssp             TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEE-E--EHHHHHCGGGHHHHHHHHHHH
T ss_pred             CCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhcCCeEE-E--ecCccchHHHHHHHHHHhhcc
Confidence            57 8999999999999999888887899999998876653222222222233322 2  22210  12222222221 01


Q ss_pred             CCCccEEEEcCCC
Q 022103          105 FAALDILVNNAGV  117 (302)
Q Consensus       105 ~g~id~lv~~aG~  117 (302)
                      .+.+|+++.++|.
T Consensus       243 ~~g~Dvvid~~G~  255 (364)
T 1gu7_A          243 GGEAKLALNCVGG  255 (364)
T ss_dssp             TCCEEEEEESSCH
T ss_pred             CCCceEEEECCCc
Confidence            2479999999985

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=97.08  E-value=0.0034  Score=55.85  Aligned_cols=43  Identities=28%  Similarity=0.219  Sum_probs=39.6

Q ss_pred             CcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHH
Q 022103           30 ETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESL   74 (302)
Q Consensus        30 ~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l   74 (302)
                      +|+++|.|+ ||.|++++..|++.|.+|.++.|+.++.++.+ ++
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la-~~  160 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQ-RL  160 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH-HH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HC
Confidence            899999997 89999999999999999999999999988877 55

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=97.01  E-value=0.024  Score=50.33  Aligned_cols=43  Identities=19%  Similarity=0.134  Sum_probs=37.4

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHH
Q 022103           31 TIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESL   74 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l   74 (302)
                      +++.|.|+ |.+|..+|..|++.|++|++.+|+.+.++...+.+
T Consensus         5 ~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i   47 (283)
T 4e12_A            5 TNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKRF   47 (283)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHH
Confidence            56788876 77999999999999999999999998887776654

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=96.98  E-value=0.00024  Score=63.66  Aligned_cols=44  Identities=16%  Similarity=0.172  Sum_probs=38.6

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHH
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGL-TVILTARDVERGQRA   70 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~~~~~~~~   70 (302)
                      .++++|+++|+|+ ||+|++++..|++.|+ +|++++|+.++.++.
T Consensus       113 ~~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~l  157 (277)
T 3don_A          113 EGIEDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNNW  157 (277)
T ss_dssp             TTGGGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTTC
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHH
Confidence            4578999999998 7999999999999999 899999998775543

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=96.92  E-value=0.0011  Score=60.02  Aligned_cols=77  Identities=25%  Similarity=0.218  Sum_probs=51.2

Q ss_pred             Cc-EEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCc
Q 022103           30 ET-IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAAL  108 (302)
Q Consensus        30 ~k-~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~i  108 (302)
                      |. +++|+|++|++|...++.+...|++|++++++.++++.+ +++   |...   ..|..+.+  .+.+.++.  .+.+
T Consensus       149 g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~-~~l---Ga~~---~i~~~~~~--~~~~~~~~--~~~~  217 (328)
T 1xa0_A          149 ERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYL-RVL---GAKE---VLAREDVM--AERIRPLD--KQRW  217 (328)
T ss_dssp             GGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHH-HHT---TCSE---EEECC-----------CC--SCCE
T ss_pred             CCceEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-HHc---CCcE---EEecCCcH--HHHHHHhc--CCcc
Confidence            44 799999999999999999888999999999998777654 333   3332   13444432  12222221  1469


Q ss_pred             cEEEEcCCC
Q 022103          109 DILVNNAGV  117 (302)
Q Consensus       109 d~lv~~aG~  117 (302)
                      |+++.++|.
T Consensus       218 d~vid~~g~  226 (328)
T 1xa0_A          218 AAAVDPVGG  226 (328)
T ss_dssp             EEEEECSTT
T ss_pred             cEEEECCcH
Confidence            999999985

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=96.88  E-value=0.014  Score=52.54  Aligned_cols=112  Identities=14%  Similarity=0.044  Sum_probs=69.1

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCC--EEEEEecChhhHHHHHHHHhh----CCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           32 IAIVTGANKGIGFALVKRLAELGL--TVILTARDVERGQRAVESLSE----KGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        32 ~vlItGas~gIG~ala~~l~~~G~--~V~l~~r~~~~~~~~~~~l~~----~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      .+.|+|+ |.+|.+++..|+..|.  +|+++++++++++.....+.+    ......+...  +|.+.+           
T Consensus         2 kI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d~~a~-----------   67 (294)
T 1oju_A            2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADYSLL-----------   67 (294)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SCGGGG-----------
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEe--CCHHHh-----------
Confidence            4789999 9999999999999998  899999999887633333322    1122222221  122222           


Q ss_pred             CCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecC
Q 022103          106 AALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISS  166 (302)
Q Consensus       106 g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS  166 (302)
                      ...|++|.++|....+  ..+.   .+.+..|.-    +.+.+.+.+.+....+.|+++|-
T Consensus        68 ~~aDiVViaag~~~kp--G~~R---~dl~~~N~~----i~~~i~~~i~~~~p~a~iivvsN  119 (294)
T 1oju_A           68 KGSEIIVVTAGLARKP--GMTR---LDLAHKNAG----IIKDIAKKIVENAPESKILVVTN  119 (294)
T ss_dssp             TTCSEEEECCCCCCCS--SCCH---HHHHHHHHH----HHHHHHHHHHTTSTTCEEEECSS
T ss_pred             CCCCEEEECCCCCCCC--CCcH---HHHHHHHHH----HHHHHHHHHHhhCCCeEEEEeCC
Confidence            3689999999976432  2333   334555544    44444444444434566777664

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=96.88  E-value=0.0048  Score=56.18  Aligned_cols=78  Identities=18%  Similarity=0.232  Sum_probs=55.1

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      -+|.+++|+|+ |++|...++.+...|++|++++++.++++.+ +++   |...   ..|..+.+..+.+.+    ..+.
T Consensus       165 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~-~~l---Ga~~---~i~~~~~~~~~~~~~----~~g~  232 (340)
T 3s2e_A          165 RPGQWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKLNLA-RRL---GAEV---AVNARDTDPAAWLQK----EIGG  232 (340)
T ss_dssp             CTTSEEEEECC-STTHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHT---TCSE---EEETTTSCHHHHHHH----HHSS
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-HHc---CCCE---EEeCCCcCHHHHHHH----hCCC
Confidence            36889999997 8999999998888999999999998877643 333   3332   235554433333322    2257


Q ss_pred             ccEEEEcCCC
Q 022103          108 LDILVNNAGV  117 (302)
Q Consensus       108 id~lv~~aG~  117 (302)
                      +|.++.++|.
T Consensus       233 ~d~vid~~g~  242 (340)
T 3s2e_A          233 AHGVLVTAVS  242 (340)
T ss_dssp             EEEEEESSCC
T ss_pred             CCEEEEeCCC
Confidence            9999999874

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=96.87  E-value=0.005  Score=54.10  Aligned_cols=81  Identities=17%  Similarity=0.290  Sum_probs=57.0

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecCh-------------------hhHHHHHHHHhhCCCce--eEE
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGL-TVILTARDV-------------------ERGQRAVESLSEKGLPV--NFF   84 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~~-------------------~~~~~~~~~l~~~~~~~--~~~   84 (302)
                      .+++++|+|.|+ ||+|.++++.|++.|. ++.+++++.                   .|.+.+++.+.+.+..+  ..+
T Consensus        25 ~l~~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~  103 (251)
T 1zud_1           25 KLLDSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTAL  103 (251)
T ss_dssp             HHHTCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred             HHhcCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEE
Confidence            367889999998 6799999999999997 688886642                   56667777777655444  444


Q ss_pred             EeeCCCHHHHHHHHHHHHhhCCCccEEEEcCC
Q 022103           85 QLDVSDPSSIEAFVSWFKSNFAALDILVNNAG  116 (302)
Q Consensus        85 ~~Dlt~~~~~~~~~~~~~~~~g~id~lv~~aG  116 (302)
                      ..+++ .+.+.++++       ..|+||.+..
T Consensus       104 ~~~~~-~~~~~~~~~-------~~DvVi~~~d  127 (251)
T 1zud_1          104 QQRLT-GEALKDAVA-------RADVVLDCTD  127 (251)
T ss_dssp             CSCCC-HHHHHHHHH-------HCSEEEECCS
T ss_pred             eccCC-HHHHHHHHh-------cCCEEEECCC
Confidence            44444 344544444       4699987753

>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*

Probab=96.85  E-value=0.014  Score=52.27  Aligned_cols=39  Identities=21%  Similarity=0.240  Sum_probs=35.0

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH
Q 022103           31 TIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRA   70 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~   70 (302)
                      +++.|.|+ |.+|..+|..|++.|++|++++|+.++++..
T Consensus        16 ~~I~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~   54 (302)
T 1f0y_A           16 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKS   54 (302)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHH
Confidence            56889998 8899999999999999999999998877654

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=96.83  E-value=0.011  Score=54.03  Aligned_cols=118  Identities=14%  Similarity=0.156  Sum_probs=76.9

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCC--EEEEEecChhhHHHHHHHHhhCC---CceeEEEeeCCCHHHHHHHHHHH
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGL--TVILTARDVERGQRAVESLSEKG---LPVNFFQLDVSDPSSIEAFVSWF  101 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~--~V~l~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dlt~~~~~~~~~~~~  101 (302)
                      ..+.+.+.|+|+ |.+|..+|..|+.+|.  +|++++++.++++..+..+.+..   ........  +|.++        
T Consensus        16 ~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~--~d~~~--------   84 (331)
T 4aj2_A           16 QVPQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSS--KDYSV--------   84 (331)
T ss_dssp             -CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEEC--SSGGG--------
T ss_pred             cCCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEc--CCHHH--------
Confidence            455678999998 8999999999999997  89999999888887777776531   11122211  22221        


Q ss_pred             HhhCCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCC
Q 022103          102 KSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSR  167 (302)
Q Consensus       102 ~~~~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~  167 (302)
                         +...|++|.+||....+  ..+.   .+.++.|.--...+.+.+..+    ...+.++++|--
T Consensus        85 ---~~~aDiVvi~aG~~~kp--G~tR---~dL~~~N~~I~~~i~~~i~~~----~p~a~vlvvtNP  138 (331)
T 4aj2_A           85 ---TANSKLVIITAGARQQE--GESR---LNLVQRNVNIFKFIIPNVVKY----SPQCKLLIVSNP  138 (331)
T ss_dssp             ---GTTEEEEEECCSCCCCT--TCCG---GGGHHHHHHHHHHHHHHHHHH----CTTCEEEECSSS
T ss_pred             ---hCCCCEEEEccCCCCCC--CccH---HHHHHHHHHHHHHHHHHHHHH----CCCeEEEEecCh
Confidence               24789999999976432  2332   345677765555555555544    234677776643

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=96.81  E-value=0.0074  Score=55.11  Aligned_cols=115  Identities=16%  Similarity=0.176  Sum_probs=68.3

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHhhC----CCceeEEEeeCCCHHHHHHHHHHHH
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGL-TVILTARDVERGQRAVESLSEK----GLPVNFFQLDVSDPSSIEAFVSWFK  102 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~----~~~~~~~~~Dlt~~~~~~~~~~~~~  102 (302)
                      |+...+.|+|+ |.+|.+++..|+..|. +|++++++.++++.....+.+.    +....+...  +|.+.         
T Consensus         5 m~~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t--~d~~a---------   72 (324)
T 3gvi_A            5 MARNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGA--NDYAA---------   72 (324)
T ss_dssp             -CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEE--SSGGG---------
T ss_pred             CcCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEe--CCHHH---------
Confidence            45567999998 9999999999999998 9999999998776544444432    112222211  12221         


Q ss_pred             hhCCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEec
Q 022103          103 SNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNIS  165 (302)
Q Consensus       103 ~~~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vs  165 (302)
                        +...|++|.++|....+  ..+   ..+.+..|..-...+.+.+..+    ...+.++++|
T Consensus        73 --~~~aDiVIiaag~p~k~--G~~---R~dl~~~N~~i~~~i~~~i~~~----~p~a~iivvt  124 (324)
T 3gvi_A           73 --IEGADVVIVTAGVPRKP--GMS---RDDLLGINLKVMEQVGAGIKKY----APEAFVICIT  124 (324)
T ss_dssp             --GTTCSEEEECCSCCCC----------CHHHHHHHHHHHHHHHHHHHH----CTTCEEEECC
T ss_pred             --HCCCCEEEEccCcCCCC--CCC---HHHHHHhhHHHHHHHHHHHHHH----CCCeEEEecC
Confidence              23689999999975432  122   2234555554444444444333    1335555555

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=96.81  E-value=0.016  Score=52.68  Aligned_cols=116  Identities=22%  Similarity=0.186  Sum_probs=71.3

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecC--hhhHHHHHHHHhhC----CCceeEEEeeCCCHHHHHHHHH
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGL-TVILTARD--VERGQRAVESLSEK----GLPVNFFQLDVSDPSSIEAFVS   99 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~--~~~~~~~~~~l~~~----~~~~~~~~~Dlt~~~~~~~~~~   99 (302)
                      .++.+.+.|+|+ |.+|..+|..|+..|. +|++++++  .++.+.....+.+.    +....+...  ++.+       
T Consensus         5 ~~~~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t--~d~~-------   74 (315)
T 3tl2_A            5 TIKRKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGT--SDYA-------   74 (315)
T ss_dssp             CCCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEE--SCGG-------
T ss_pred             ccCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEc--CCHH-------
Confidence            345678999997 9999999999999999 99999999  44544433333321    111112211  1222       


Q ss_pred             HHHhhCCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEec
Q 022103          100 WFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNIS  165 (302)
Q Consensus       100 ~~~~~~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vs  165 (302)
                          .+...|++|.++|....+  ..+.   .+.+..|..-...+.+.+..+    ...+.++++|
T Consensus        75 ----a~~~aDvVIiaag~p~kp--g~~R---~dl~~~N~~i~~~i~~~i~~~----~p~a~vlvvs  127 (315)
T 3tl2_A           75 ----DTADSDVVVITAGIARKP--GMSR---DDLVATNSKIMKSITRDIAKH----SPNAIIVVLT  127 (315)
T ss_dssp             ----GGTTCSEEEECCSCCCCT--TCCH---HHHHHHHHHHHHHHHHHHHHH----CTTCEEEECC
T ss_pred             ----HhCCCCEEEEeCCCCCCC--CCCH---HHHHHHHHHHHHHHHHHHHHh----CCCeEEEECC
Confidence                234789999999986432  2333   445666665555555555443    1345666665

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=96.80  E-value=0.0018  Score=55.86  Aligned_cols=72  Identities=14%  Similarity=0.165  Sum_probs=55.6

Q ss_pred             CcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCcc
Q 022103           30 ETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALD  109 (302)
Q Consensus        30 ~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id  109 (302)
                      .+.++|.|+ |.+|+.+++.|.+.|+ |++++++++..+...     .  .+.++.+|.++.+.+++.      .....|
T Consensus         9 ~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~-----~--~~~~i~gd~~~~~~l~~a------~i~~ad   73 (234)
T 2aef_A            9 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKVLR-----S--GANFVHGDPTRVSDLEKA------NVRGAR   73 (234)
T ss_dssp             -CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH-----T--TCEEEESCTTCHHHHHHT------TCTTCS
T ss_pred             CCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh-----c--CCeEEEcCCCCHHHHHhc------Ccchhc
Confidence            457889998 8999999999999999 999999987755432     2  477899999999866543      123678


Q ss_pred             EEEEcCC
Q 022103          110 ILVNNAG  116 (302)
Q Consensus       110 ~lv~~aG  116 (302)
                      .+|.+.+
T Consensus        74 ~vi~~~~   80 (234)
T 2aef_A           74 AVIVDLE   80 (234)
T ss_dssp             EEEECCS
T ss_pred             EEEEcCC
Confidence            8887764

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=96.79  E-value=0.029  Score=51.63  Aligned_cols=120  Identities=19%  Similarity=0.204  Sum_probs=70.0

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCC-------EEEEEecChh--hHHHHHHHHhhCCCce--eEEEeeCCCHHHH
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGL-------TVILTARDVE--RGQRAVESLSEKGLPV--NFFQLDVSDPSSI   94 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~-------~V~l~~r~~~--~~~~~~~~l~~~~~~~--~~~~~Dlt~~~~~   94 (302)
                      -+++.-.|.|+||+|+||..++..|++...       ++.|++..+.  .++-.+-.++......  ..+..  ++..  
T Consensus        20 ~s~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~--~~~~--   95 (345)
T 4h7p_A           20 GSMSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVVT--ADPR--   95 (345)
T ss_dssp             --CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEE--SCHH--
T ss_pred             CCCCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEEEc--CChH--
Confidence            345566899999999999999999998643       6888888653  3444455555432111  12221  1221  


Q ss_pred             HHHHHHHHhhCCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEec
Q 022103           95 EAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNIS  165 (302)
Q Consensus        95 ~~~~~~~~~~~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vs  165 (302)
                       +       .+...|++|..||....+  .++.+   +.++.|..=.-.+.+.+..+   ......|+.+|
T Consensus        96 -~-------a~~~advVvi~aG~prkp--GmtR~---DLl~~Na~I~~~~~~~i~~~---a~~~~~vlvvs  150 (345)
T 4h7p_A           96 -V-------AFDGVAIAIMCGAFPRKA--GMERK---DLLEMNARIFKEQGEAIAAV---AASDCRVVVVG  150 (345)
T ss_dssp             -H-------HTTTCSEEEECCCCCCCT--TCCHH---HHHHHHHHHHHHHHHHHHHH---SCTTCEEEECS
T ss_pred             -H-------HhCCCCEEEECCCCCCCC--CCCHH---HHHHHhHHHHHHHHHHHHhh---ccCceEEEEeC
Confidence             1       234789999999986542  24444   45777755444444444332   21234455555

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=96.72  E-value=0.0072  Score=55.57  Aligned_cols=79  Identities=19%  Similarity=0.162  Sum_probs=55.6

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHc-CCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAEL-GLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~-G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      .+|.+|+|+|+ |++|...+..+... |++|++++++.++++.+. ++   |...   ..|..+.  +.+.+.++.. ..
T Consensus       185 ~~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~-~l---Ga~~---vi~~~~~--~~~~v~~~~~-g~  253 (359)
T 1h2b_A          185 YPGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAE-RL---GADH---VVDARRD--PVKQVMELTR-GR  253 (359)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHH-HT---TCSE---EEETTSC--HHHHHHHHTT-TC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH-Hh---CCCE---EEeccch--HHHHHHHHhC-CC
Confidence            36889999999 89999999888888 999999999987766543 33   3222   2355543  3333333322 12


Q ss_pred             CccEEEEcCCC
Q 022103          107 ALDILVNNAGV  117 (302)
Q Consensus       107 ~id~lv~~aG~  117 (302)
                      .+|+++.++|.
T Consensus       254 g~Dvvid~~G~  264 (359)
T 1h2b_A          254 GVNVAMDFVGS  264 (359)
T ss_dssp             CEEEEEESSCC
T ss_pred             CCcEEEECCCC
Confidence            69999999986

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=96.72  E-value=0.0058  Score=56.51  Aligned_cols=79  Identities=16%  Similarity=0.141  Sum_probs=54.1

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      .+|.+|+|.|++|++|...++.+...|++|+.+. +.++++ .++++   |..   ...|..+.+ +.+.+.++-  .+.
T Consensus       163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~-~~~~l---Ga~---~vi~~~~~~-~~~~v~~~t--~g~  231 (371)
T 3gqv_A          163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFD-LAKSR---GAE---EVFDYRAPN-LAQTIRTYT--KNN  231 (371)
T ss_dssp             SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHH-HHHHT---TCS---EEEETTSTT-HHHHHHHHT--TTC
T ss_pred             CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHH-HHHHc---CCc---EEEECCCch-HHHHHHHHc--cCC
Confidence            4688999999999999999999988999998886 566655 44444   322   123444443 222222222  145


Q ss_pred             ccEEEEcCCC
Q 022103          108 LDILVNNAGV  117 (302)
Q Consensus       108 id~lv~~aG~  117 (302)
                      +|+++.++|.
T Consensus       232 ~d~v~d~~g~  241 (371)
T 3gqv_A          232 LRYALDCITN  241 (371)
T ss_dssp             CCEEEESSCS
T ss_pred             ccEEEECCCc
Confidence            9999999986

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=96.70  E-value=0.014  Score=53.47  Aligned_cols=80  Identities=21%  Similarity=0.293  Sum_probs=54.1

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHhhCCCceeEEEeeCC--CHHHHHHHHHHHHhh
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGL-TVILTARDVERGQRAVESLSEKGLPVNFFQLDVS--DPSSIEAFVSWFKSN  104 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt--~~~~~~~~~~~~~~~  104 (302)
                      .+|.+|+|+|+ |++|...++.+...|+ +|++++++.++++.+ +++   |.. .+  .|..  +.+++.+.+.+... 
T Consensus       170 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a-~~l---Ga~-~v--i~~~~~~~~~~~~~i~~~~~-  240 (356)
T 1pl8_A          170 TLGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKA-KEI---GAD-LV--LQISKESPQEIARKVEGQLG-  240 (356)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH-HHT---TCS-EE--EECSSCCHHHHHHHHHHHHT-
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHh---CCC-EE--EcCcccccchHHHHHHHHhC-
Confidence            35889999996 8999999988888899 899999998776544 333   333 22  3444  22333322222222 


Q ss_pred             CCCccEEEEcCCC
Q 022103          105 FAALDILVNNAGV  117 (302)
Q Consensus       105 ~g~id~lv~~aG~  117 (302)
                       ..+|+++.++|.
T Consensus       241 -~g~D~vid~~g~  252 (356)
T 1pl8_A          241 -CKPEVTIECTGA  252 (356)
T ss_dssp             -SCCSEEEECSCC
T ss_pred             -CCCCEEEECCCC
Confidence             469999999985

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=96.70  E-value=0.022  Score=51.91  Aligned_cols=115  Identities=16%  Similarity=0.137  Sum_probs=72.2

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHhhC----CCceeEEEeeCCCHHHHHHHHHHHH
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGL-TVILTARDVERGQRAVESLSEK----GLPVNFFQLDVSDPSSIEAFVSWFK  102 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~----~~~~~~~~~Dlt~~~~~~~~~~~~~  102 (302)
                      |+.+.+.|+|+ |.+|.+++..|+..|. +|++++++.++.+..+..+.+.    +....+...  ++.+.         
T Consensus         3 m~~~kI~iiGa-G~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t--~d~~a---------   70 (321)
T 3p7m_A            3 MARKKITLVGA-GNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGT--NDYKD---------   70 (321)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SCGGG---------
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEc--CCHHH---------
Confidence            34467888895 8999999999999988 9999999998877666666543    112222211  12221         


Q ss_pred             hhCCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEec
Q 022103          103 SNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNIS  165 (302)
Q Consensus       103 ~~~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vs  165 (302)
                        +...|++|.++|....+  ..+.   .+.+..|..-...+.+.+..+.    ..+.++++|
T Consensus        71 --~~~aDvVIi~ag~p~k~--G~~R---~dl~~~N~~i~~~i~~~i~~~~----p~a~vivvt  122 (321)
T 3p7m_A           71 --LENSDVVIVTAGVPRKP--GMSR---DDLLGINIKVMQTVGEGIKHNC----PNAFVICIT  122 (321)
T ss_dssp             --GTTCSEEEECCSCCCCT--TCCH---HHHHHHHHHHHHHHHHHHHHHC----TTCEEEECC
T ss_pred             --HCCCCEEEEcCCcCCCC--CCCH---HHHHHHhHHHHHHHHHHHHHHC----CCcEEEEec
Confidence              23689999999976432  2333   3345566555555555544432    345666654

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=96.70  E-value=0.011  Score=54.91  Aligned_cols=80  Identities=18%  Similarity=0.174  Sum_probs=54.6

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcC-CEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCC--CHHHHHHHHHHHHhhC
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELG-LTVILTARDVERGQRAVESLSEKGLPVNFFQLDVS--DPSSIEAFVSWFKSNF  105 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G-~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt--~~~~~~~~~~~~~~~~  105 (302)
                      +|.+|+|+| +|++|...++.+...| ++|++++++.++++.+. ++   |.. .+  .|..  +.+++.+.+.++... 
T Consensus       195 ~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~-~l---Ga~-~v--i~~~~~~~~~~~~~v~~~~~g-  265 (380)
T 1vj0_A          195 AGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAE-EI---GAD-LT--LNRRETSVEERRKAIMDITHG-  265 (380)
T ss_dssp             BTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHH-HT---TCS-EE--EETTTSCHHHHHHHHHHHTTT-
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHH-Hc---CCc-EE--EeccccCcchHHHHHHHHhCC-
Confidence            578999999 8999999999888889 59999999987766543 33   332 12  2433  234443333332211 


Q ss_pred             CCccEEEEcCCC
Q 022103          106 AALDILVNNAGV  117 (302)
Q Consensus       106 g~id~lv~~aG~  117 (302)
                      ..+|++|.++|.
T Consensus       266 ~g~Dvvid~~g~  277 (380)
T 1vj0_A          266 RGADFILEATGD  277 (380)
T ss_dssp             SCEEEEEECSSC
T ss_pred             CCCcEEEECCCC
Confidence            269999999985

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=96.68  E-value=0.0061  Score=56.24  Aligned_cols=78  Identities=24%  Similarity=0.287  Sum_probs=52.9

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHH-cCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           29 KETIAIVTGANKGIGFALVKRLAE-LGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~-~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      +|.+|+|+||+|++|...++.+.. .|++|++++++.++++.+ +++   |....   .|..+  ++.+.+.++  ..+.
T Consensus       171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~-~~l---Gad~v---i~~~~--~~~~~v~~~--~~~g  239 (363)
T 4dvj_A          171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWV-KSL---GAHHV---IDHSK--PLAAEVAAL--GLGA  239 (363)
T ss_dssp             SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHH-HHT---TCSEE---ECTTS--CHHHHHHTT--CSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHH-HHc---CCCEE---EeCCC--CHHHHHHHh--cCCC
Confidence            688999999999999988876665 589999999998776654 333   33321   23332  222222222  2247


Q ss_pred             ccEEEEcCCC
Q 022103          108 LDILVNNAGV  117 (302)
Q Consensus       108 id~lv~~aG~  117 (302)
                      +|+++.++|.
T Consensus       240 ~Dvvid~~g~  249 (363)
T 4dvj_A          240 PAFVFSTTHT  249 (363)
T ss_dssp             EEEEEECSCH
T ss_pred             ceEEEECCCc
Confidence            9999999885

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=96.67  E-value=0.0069  Score=56.02  Aligned_cols=74  Identities=15%  Similarity=0.207  Sum_probs=54.4

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCc
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAAL  108 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~i  108 (302)
                      +|.+|+|+|+ |++|...++.+...|++|++++++.++++.+. ++.   ..   ...|..+.+.++    ++.   +.+
T Consensus       194 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~-~lG---a~---~vi~~~~~~~~~----~~~---~g~  258 (369)
T 1uuf_A          194 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAK-ALG---AD---EVVNSRNADEMA----AHL---KSF  258 (369)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-HHT---CS---EEEETTCHHHHH----TTT---TCE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcC---Cc---EEeccccHHHHH----Hhh---cCC
Confidence            5889999998 88999999888888999999999988877554 343   22   124555554322    222   479


Q ss_pred             cEEEEcCCC
Q 022103          109 DILVNNAGV  117 (302)
Q Consensus       109 d~lv~~aG~  117 (302)
                      |+++.++|.
T Consensus       259 Dvvid~~g~  267 (369)
T 1uuf_A          259 DFILNTVAA  267 (369)
T ss_dssp             EEEEECCSS
T ss_pred             CEEEECCCC
Confidence            999999986

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=96.65  E-value=0.0034  Score=57.78  Aligned_cols=75  Identities=13%  Similarity=0.197  Sum_probs=53.4

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCc
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAAL  108 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~i  108 (302)
                      +|.+|+|+|+ |++|...++.+...|++|++++++.++++.+. ++.   ... +  .|..+..+   +.+++.   +.+
T Consensus       179 ~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~-~lG---a~~-v--~~~~~~~~---~~~~~~---~~~  244 (360)
T 1piw_A          179 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAM-KMG---ADH-Y--IATLEEGD---WGEKYF---DTF  244 (360)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHH-HHT---CSE-E--EEGGGTSC---HHHHSC---SCE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-HcC---CCE-E--EcCcCchH---HHHHhh---cCC
Confidence            5889999999 99999999988888999999999988876554 343   221 2  34433301   122222   479


Q ss_pred             cEEEEcCCC
Q 022103          109 DILVNNAGV  117 (302)
Q Consensus       109 d~lv~~aG~  117 (302)
                      |++|.++|.
T Consensus       245 D~vid~~g~  253 (360)
T 1piw_A          245 DLIVVCASS  253 (360)
T ss_dssp             EEEEECCSC
T ss_pred             CEEEECCCC
Confidence            999999986

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=96.64  E-value=0.0055  Score=56.57  Aligned_cols=80  Identities=18%  Similarity=0.248  Sum_probs=55.5

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCC-HHHHHHHHHHHHhhC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGL-TVILTARDVERGQRAVESLSEKGLPVNFFQLDVSD-PSSIEAFVSWFKSNF  105 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~-~~~~~~~~~~~~~~~  105 (302)
                      .+|.+|+|+|+ |++|...++.+...|+ +|++++++.++++.+. ++   |...   ..|..+ .+++.+.+.++..  
T Consensus       191 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~-~l---Ga~~---vi~~~~~~~~~~~~~~~~~~--  260 (374)
T 1cdo_A          191 EPGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAK-VF---GATD---FVNPNDHSEPISQVLSKMTN--  260 (374)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HT---TCCE---EECGGGCSSCHHHHHHHHHT--
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-Hh---CCce---EEeccccchhHHHHHHHHhC--
Confidence            35789999996 8999999998888899 8999999988876543 33   3221   234433 1234444444333  


Q ss_pred             CCccEEEEcCCC
Q 022103          106 AALDILVNNAGV  117 (302)
Q Consensus       106 g~id~lv~~aG~  117 (302)
                      +.+|++|.++|.
T Consensus       261 ~g~D~vid~~g~  272 (374)
T 1cdo_A          261 GGVDFSLECVGN  272 (374)
T ss_dssp             SCBSEEEECSCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999986

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=96.63  E-value=0.0029  Score=58.18  Aligned_cols=76  Identities=20%  Similarity=0.272  Sum_probs=54.5

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCc
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAAL  108 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~i  108 (302)
                      +|.+|+|+|+ |+||...++.+...|++|++++++.++++...+++   |... +  .|..+.+.++       +..+.+
T Consensus       180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~l---Ga~~-v--i~~~~~~~~~-------~~~~g~  245 (357)
T 2cf5_A          180 PGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDL---GADD-Y--VIGSDQAKMS-------ELADSL  245 (357)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTS---CCSC-E--EETTCHHHHH-------HSTTTE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHc---CCce-e--eccccHHHHH-------HhcCCC
Confidence            7899999995 99999999888888999999999987766554333   3221 1  3444543332       222479


Q ss_pred             cEEEEcCCCC
Q 022103          109 DILVNNAGVS  118 (302)
Q Consensus       109 d~lv~~aG~~  118 (302)
                      |+++.++|..
T Consensus       246 D~vid~~g~~  255 (357)
T 2cf5_A          246 DYVIDTVPVH  255 (357)
T ss_dssp             EEEEECCCSC
T ss_pred             CEEEECCCCh
Confidence            9999999863

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=96.63  E-value=0.006  Score=56.36  Aligned_cols=79  Identities=15%  Similarity=0.273  Sum_probs=54.8

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCC-HHHHHHHHHHHHhhCC
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELGL-TVILTARDVERGQRAVESLSEKGLPVNFFQLDVSD-PSSIEAFVSWFKSNFA  106 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~-~~~~~~~~~~~~~~~g  106 (302)
                      +|.+|+|+|+ |+||...++.+...|+ +|++++++.++++.+ +++   |...   ..|..+ .+++.+.+.++..  +
T Consensus       191 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~-~~l---Ga~~---vi~~~~~~~~~~~~~~~~~~--~  260 (374)
T 2jhf_A          191 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKA-KEV---GATE---CVNPQDYKKPIQEVLTEMSN--G  260 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH-HHT---TCSE---EECGGGCSSCHHHHHHHHTT--S
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHh---CCce---EecccccchhHHHHHHHHhC--C
Confidence            5789999995 8999999998888899 899999998887654 333   3221   234432 1223333443322  4


Q ss_pred             CccEEEEcCCC
Q 022103          107 ALDILVNNAGV  117 (302)
Q Consensus       107 ~id~lv~~aG~  117 (302)
                      .+|+++.++|.
T Consensus       261 g~D~vid~~g~  271 (374)
T 2jhf_A          261 GVDFSFEVIGR  271 (374)
T ss_dssp             CBSEEEECSCC
T ss_pred             CCcEEEECCCC
Confidence            79999999986

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=96.62  E-value=0.0051  Score=56.92  Aligned_cols=81  Identities=21%  Similarity=0.254  Sum_probs=53.7

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHH-hhC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGL-TVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFK-SNF  105 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~-~~~  105 (302)
                      -+|.+|+|+|+ |++|...++.+...|+ +|++++++.++++ .++++.   ..   ...|.++.+.. +.+.+.. ...
T Consensus       181 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~-~a~~lG---a~---~vi~~~~~~~~-~~i~~~~~~~~  251 (370)
T 4ej6_A          181 KAGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKRR-LAEEVG---AT---ATVDPSAGDVV-EAIAGPVGLVP  251 (370)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHH-HHHHHT---CS---EEECTTSSCHH-HHHHSTTSSST
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHH-HHHHcC---CC---EEECCCCcCHH-HHHHhhhhccC
Confidence            35889999998 8999999988888899 8999999887765 444443   22   12344443322 2222110 112


Q ss_pred             CCccEEEEcCCC
Q 022103          106 AALDILVNNAGV  117 (302)
Q Consensus       106 g~id~lv~~aG~  117 (302)
                      +.+|+++.++|.
T Consensus       252 gg~Dvvid~~G~  263 (370)
T 4ej6_A          252 GGVDVVIECAGV  263 (370)
T ss_dssp             TCEEEEEECSCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999885

>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*

Probab=96.59  E-value=0.0086  Score=54.98  Aligned_cols=58  Identities=17%  Similarity=0.196  Sum_probs=44.8

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecCh-------------------hhHHHHHHHHhhCCCceeEEE
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGL-TVILTARDV-------------------ERGQRAVESLSEKGLPVNFFQ   85 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~   85 (302)
                      .+++++|+|.|+ ||+|.++++.|+..|. ++.+++++.                   .|.+.+++.+.+.++.+.+..
T Consensus        31 kL~~~~VlIvGa-GGlGs~va~~La~aGVg~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~~inP~v~v~~  108 (340)
T 3rui_A           31 IIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATG  108 (340)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEE
T ss_pred             HHhCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEecCCEeccccccccccCChhhcChHHHHHHHHHHHHhCCCCEEEE
Confidence            467899999998 7899999999999997 688888753                   456667777776665554443

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=96.58  E-value=0.0076  Score=55.68  Aligned_cols=79  Identities=16%  Similarity=0.248  Sum_probs=54.5

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCC-HHHHHHHHHHHHhhCC
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELGL-TVILTARDVERGQRAVESLSEKGLPVNFFQLDVSD-PSSIEAFVSWFKSNFA  106 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~-~~~~~~~~~~~~~~~g  106 (302)
                      +|.+|+|+|+ |+||...++.+...|+ +|++++++.++++.+ +++   |...   ..|..+ .+++.+.+.++..  +
T Consensus       195 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a-~~l---Ga~~---vi~~~~~~~~~~~~v~~~~~--~  264 (376)
T 1e3i_A          195 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKA-KAL---GATD---CLNPRELDKPVQDVITELTA--G  264 (376)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH-HHT---TCSE---EECGGGCSSCHHHHHHHHHT--S
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHh---CCcE---EEccccccchHHHHHHHHhC--C
Confidence            5789999996 8999999988888899 899999998887654 333   3221   134332 1223333333332  4


Q ss_pred             CccEEEEcCCC
Q 022103          107 ALDILVNNAGV  117 (302)
Q Consensus       107 ~id~lv~~aG~  117 (302)
                      .+|+++.++|.
T Consensus       265 g~Dvvid~~G~  275 (376)
T 1e3i_A          265 GVDYSLDCAGT  275 (376)
T ss_dssp             CBSEEEESSCC
T ss_pred             CccEEEECCCC
Confidence            79999999986

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=96.56  E-value=0.0058  Score=56.72  Aligned_cols=81  Identities=16%  Similarity=0.186  Sum_probs=55.6

Q ss_pred             ccCcEEEEeC-CCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           28 SKETIAIVTG-ANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        28 ~~~k~vlItG-as~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      .+|.+++|.| |+|++|...++.+...|++|++++++.++++.+. ++   |....   .|..+.+-.+++.+....  .
T Consensus       169 ~~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~~-~l---Ga~~~---~~~~~~~~~~~v~~~t~~--~  239 (379)
T 3iup_A          169 LEGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLK-AQ---GAVHV---CNAASPTFMQDLTEALVS--T  239 (379)
T ss_dssp             HTTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHHH-HT---TCSCE---EETTSTTHHHHHHHHHHH--H
T ss_pred             cCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hC---CCcEE---EeCCChHHHHHHHHHhcC--C
Confidence            4688999997 8999999999888888999999999988766543 33   33222   344443322323222222  2


Q ss_pred             CccEEEEcCCC
Q 022103          107 ALDILVNNAGV  117 (302)
Q Consensus       107 ~id~lv~~aG~  117 (302)
                      .+|+++.++|.
T Consensus       240 g~d~v~d~~g~  250 (379)
T 3iup_A          240 GATIAFDATGG  250 (379)
T ss_dssp             CCCEEEESCEE
T ss_pred             CceEEEECCCc
Confidence            69999999986

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=96.55  E-value=0.0022  Score=57.54  Aligned_cols=47  Identities=19%  Similarity=0.240  Sum_probs=40.7

Q ss_pred             cccccCcEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHH
Q 022103           25 KWWSKETIAIVTGANKGIGFALVKRLAELGL-TVILTARDVERGQRAVE   72 (302)
Q Consensus        25 ~~~~~~k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~~~~~~~~~~   72 (302)
                      .+++++++++|.|+ ||.|++++..|.+.|+ +|.++.|+.++.++.++
T Consensus       117 ~~~~~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~  164 (282)
T 3fbt_A          117 RVEIKNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYG  164 (282)
T ss_dssp             TCCCTTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCT
T ss_pred             CCCccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH
Confidence            35578999999998 6899999999999998 89999999988666544

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=96.52  E-value=0.0037  Score=57.90  Aligned_cols=79  Identities=14%  Similarity=0.212  Sum_probs=54.7

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCC-HHHHHHHHHHHHhhCC
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELGL-TVILTARDVERGQRAVESLSEKGLPVNFFQLDVSD-PSSIEAFVSWFKSNFA  106 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~-~~~~~~~~~~~~~~~g  106 (302)
                      +|.+|+|+|+ |+||...++.+...|+ +|++++++.++++. ++++   |...   ..|..+ .+++.+.+.++..  +
T Consensus       193 ~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~-a~~l---Ga~~---vi~~~~~~~~~~~~i~~~~~--g  262 (378)
T 3uko_A          193 PGSNVAIFGL-GTVGLAVAEGAKTAGASRIIGIDIDSKKYET-AKKF---GVNE---FVNPKDHDKPIQEVIVDLTD--G  262 (378)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHHTCSCEEEECSCTTHHHH-HHTT---TCCE---EECGGGCSSCHHHHHHHHTT--S
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHH-HHHc---CCcE---EEccccCchhHHHHHHHhcC--C
Confidence            5889999998 9999999988888899 79999999888763 3333   3322   233332 2233334443322  3


Q ss_pred             CccEEEEcCCC
Q 022103          107 ALDILVNNAGV  117 (302)
Q Consensus       107 ~id~lv~~aG~  117 (302)
                      .+|+++.++|.
T Consensus       263 g~D~vid~~g~  273 (378)
T 3uko_A          263 GVDYSFECIGN  273 (378)
T ss_dssp             CBSEEEECSCC
T ss_pred             CCCEEEECCCC
Confidence            79999999986

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=96.51  E-value=0.004  Score=56.96  Aligned_cols=71  Identities=28%  Similarity=0.397  Sum_probs=52.6

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      -+|.+|+|+|+ |+||...++.+...|++|++++++.++++.+ +++   |....+     ++.+.+.+          .
T Consensus       175 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~-~~l---Ga~~v~-----~~~~~~~~----------~  234 (348)
T 3two_A          175 TKGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDA-LSM---GVKHFY-----TDPKQCKE----------E  234 (348)
T ss_dssp             CTTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHHH-HHT---TCSEEE-----SSGGGCCS----------C
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-Hhc---CCCeec-----CCHHHHhc----------C
Confidence            35889999997 8999999998888999999999999887644 333   333322     33333221          6


Q ss_pred             ccEEEEcCCCC
Q 022103          108 LDILVNNAGVS  118 (302)
Q Consensus       108 id~lv~~aG~~  118 (302)
                      +|+++.++|..
T Consensus       235 ~D~vid~~g~~  245 (348)
T 3two_A          235 LDFIISTIPTH  245 (348)
T ss_dssp             EEEEEECCCSC
T ss_pred             CCEEEECCCcH
Confidence            99999999863

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=96.50  E-value=0.007  Score=55.80  Aligned_cols=80  Identities=16%  Similarity=0.239  Sum_probs=54.9

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCC-HHHHHHHHHHHHhhC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGL-TVILTARDVERGQRAVESLSEKGLPVNFFQLDVSD-PSSIEAFVSWFKSNF  105 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~-~~~~~~~~~~~~~~~  105 (302)
                      .+|.+|+|+|+ |++|...++.+...|+ +|++++++.++++.+. ++.   ... +  .|..+ .+++.+.+.++..  
T Consensus       189 ~~g~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~-~lG---a~~-v--i~~~~~~~~~~~~v~~~~~--  258 (373)
T 2fzw_A          189 EPGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAK-EFG---ATE-C--INPQDFSKPIQEVLIEMTD--  258 (373)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HHT---CSE-E--ECGGGCSSCHHHHHHHHTT--
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-HcC---Cce-E--eccccccccHHHHHHHHhC--
Confidence            35789999996 8999999988888899 8999999988876543 443   221 1  34332 1233333333322  


Q ss_pred             CCccEEEEcCCC
Q 022103          106 AALDILVNNAGV  117 (302)
Q Consensus       106 g~id~lv~~aG~  117 (302)
                      +.+|+++.++|.
T Consensus       259 ~g~D~vid~~g~  270 (373)
T 2fzw_A          259 GGVDYSFECIGN  270 (373)
T ss_dssp             SCBSEEEECSCC
T ss_pred             CCCCEEEECCCc
Confidence            479999999986

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=96.48  E-value=0.0064  Score=55.46  Aligned_cols=77  Identities=18%  Similarity=0.305  Sum_probs=53.6

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHc--CCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           29 KETIAIVTGANKGIGFALVKRLAEL--GLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~--G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      +|.+|+|+|+ |+||...++.+...  |++|++++++.++++.+. ++.   ... +  .|..+.+   .+.+++.. ..
T Consensus       170 ~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~-~lG---a~~-v--i~~~~~~---~~~~~~~~-g~  237 (344)
T 2h6e_A          170 AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHRDFAL-ELG---ADY-V--SEMKDAE---SLINKLTD-GL  237 (344)
T ss_dssp             SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHH-HHT---CSE-E--ECHHHHH---HHHHHHHT-TC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHH-HhC---CCE-E--eccccch---HHHHHhhc-CC
Confidence            7899999999 89999999988888  999999999988766543 343   221 1  2322201   22333332 22


Q ss_pred             CccEEEEcCCC
Q 022103          107 ALDILVNNAGV  117 (302)
Q Consensus       107 ~id~lv~~aG~  117 (302)
                      .+|+++.++|.
T Consensus       238 g~D~vid~~g~  248 (344)
T 2h6e_A          238 GASIAIDLVGT  248 (344)
T ss_dssp             CEEEEEESSCC
T ss_pred             CccEEEECCCC
Confidence            69999999985

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=96.48  E-value=0.01  Score=55.43  Aligned_cols=80  Identities=24%  Similarity=0.290  Sum_probs=54.0

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGL-TVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      -+|.+|+|+|+ |++|...+..+...|+ +|++++++.++++.+ +++.   ...   ..|..+.+..+. +.++-. ..
T Consensus       212 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~-~~lG---a~~---vi~~~~~~~~~~-i~~~t~-g~  281 (404)
T 3ip1_A          212 RPGDNVVILGG-GPIGLAAVAILKHAGASKVILSEPSEVRRNLA-KELG---ADH---VIDPTKENFVEA-VLDYTN-GL  281 (404)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHH-HHHT---CSE---EECTTTSCHHHH-HHHHTT-TC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHcC---CCE---EEcCCCCCHHHH-HHHHhC-CC
Confidence            35889999998 8999999988888899 899999998776644 4443   221   234444332222 222211 12


Q ss_pred             CccEEEEcCCC
Q 022103          107 ALDILVNNAGV  117 (302)
Q Consensus       107 ~id~lv~~aG~  117 (302)
                      .+|+++.++|.
T Consensus       282 g~D~vid~~g~  292 (404)
T 3ip1_A          282 GAKLFLEATGV  292 (404)
T ss_dssp             CCSEEEECSSC
T ss_pred             CCCEEEECCCC
Confidence            69999999987

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=96.47  E-value=0.0055  Score=51.71  Aligned_cols=42  Identities=24%  Similarity=0.404  Sum_probs=36.9

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHH
Q 022103           32 IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVES   73 (302)
Q Consensus        32 ~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~   73 (302)
                      +++|+||+|.+|.++++.|++.|++|++++|+.++.+...+.
T Consensus         2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~   43 (212)
T 1jay_A            2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAE   43 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHH
T ss_pred             eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence            478999999999999999999999999999998877665554

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=96.44  E-value=0.002  Score=57.26  Aligned_cols=46  Identities=28%  Similarity=0.279  Sum_probs=39.4

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHH
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVE   72 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~   72 (302)
                      ..+++++++|.|+ |++|+++++.|.+.|++|++++|+.++.+...+
T Consensus       125 ~~~~~~~v~iiGa-G~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~  170 (275)
T 2hk9_A          125 PEVKEKSILVLGA-GGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQ  170 (275)
T ss_dssp             TTGGGSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSHHHHHHHTT
T ss_pred             CCcCCCEEEEECc-hHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHH
Confidence            3577899999997 789999999999999999999999877665443

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=96.43  E-value=0.0019  Score=57.02  Aligned_cols=70  Identities=24%  Similarity=0.392  Sum_probs=49.4

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGL-TVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      .+++ +++|.|+ ||.|++++..|++.|+ +|++++|+.++.++.++++       ...  +.   +++.+.+.      
T Consensus       106 ~~~~-~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~~~-------~~~--~~---~~~~~~~~------  165 (253)
T 3u62_A          106 EVKE-PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIERAKALDFPV-------KIF--SL---DQLDEVVK------  165 (253)
T ss_dssp             CCCS-SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCCSSC-------EEE--EG---GGHHHHHH------
T ss_pred             CCCC-eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHc-------ccC--CH---HHHHhhhc------
Confidence            3567 8999997 8999999999999998 8999999987765443321       111  22   22333332      


Q ss_pred             CCccEEEEcCCC
Q 022103          106 AALDILVNNAGV  117 (302)
Q Consensus       106 g~id~lv~~aG~  117 (302)
                       ..|+||++...
T Consensus       166 -~aDiVInatp~  176 (253)
T 3u62_A          166 -KAKSLFNTTSV  176 (253)
T ss_dssp             -TCSEEEECSST
T ss_pred             -CCCEEEECCCC
Confidence             57999998753

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=96.42  E-value=0.037  Score=49.83  Aligned_cols=100  Identities=17%  Similarity=0.185  Sum_probs=58.3

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCC--EEEEEecChhhHHHHHHHHhhCC---CceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           32 IAIVTGANKGIGFALVKRLAELGL--TVILTARDVERGQRAVESLSEKG---LPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        32 ~vlItGas~gIG~ala~~l~~~G~--~V~l~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      ++.|+|+ |.+|..++..|+..|+  +|++++++.++++.....+.+..   ....+..   ++.+.           +.
T Consensus         2 kI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~---~~~~a-----------~~   66 (304)
T 2v6b_A            2 KVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWH---GGHSE-----------LA   66 (304)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEE---ECGGG-----------GT
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEE---CCHHH-----------hC
Confidence            5889998 9999999999999998  99999999887766555554322   1122221   12221           24


Q ss_pred             CccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhh
Q 022103          107 ALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPL  151 (302)
Q Consensus       107 ~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~  151 (302)
                      ..|++|.++|....+  ..   ...+.+..|+.-...+++.+.++
T Consensus        67 ~aDvVIi~~~~~~~~--g~---~r~dl~~~n~~i~~~i~~~i~~~  106 (304)
T 2v6b_A           67 DAQVVILTAGANQKP--GE---SRLDLLEKNADIFRELVPQITRA  106 (304)
T ss_dssp             TCSEEEECC-----------------CHHHHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEcCCCCCCC--CC---cHHHHHHhHHHHHHHHHHHHHHh
Confidence            789999999865321  11   12233445544444444444443

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=96.42  E-value=0.0067  Score=54.81  Aligned_cols=75  Identities=17%  Similarity=0.291  Sum_probs=51.8

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      -+|.+++|+||+|++|...+..+...|++|+.+.++ ++ .+.++++   |...   ..|..+.+.+.+       ....
T Consensus       151 ~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~-~~-~~~~~~l---Ga~~---~i~~~~~~~~~~-------~~~g  215 (321)
T 3tqh_A          151 KQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASK-RN-HAFLKAL---GAEQ---CINYHEEDFLLA-------ISTP  215 (321)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECH-HH-HHHHHHH---TCSE---EEETTTSCHHHH-------CCSC
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEecc-ch-HHHHHHc---CCCE---EEeCCCcchhhh-------hccC
Confidence            468899999999999999999999999999988754 34 3344444   3221   234444432221       1247


Q ss_pred             ccEEEEcCCC
Q 022103          108 LDILVNNAGV  117 (302)
Q Consensus       108 id~lv~~aG~  117 (302)
                      +|+++.++|.
T Consensus       216 ~D~v~d~~g~  225 (321)
T 3tqh_A          216 VDAVIDLVGG  225 (321)
T ss_dssp             EEEEEESSCH
T ss_pred             CCEEEECCCc
Confidence            9999999885

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=96.41  E-value=0.0047  Score=56.73  Aligned_cols=84  Identities=21%  Similarity=0.246  Sum_probs=49.6

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCc
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAAL  108 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~i  108 (302)
                      +|.+|+|.|++|++|...++.+...|++++++.++.++.++..+.+.+.|.... +  |..+. .... +.++....+.+
T Consensus       167 ~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~v-i--~~~~~-~~~~-~~~~~~~~~~~  241 (357)
T 1zsy_A          167 PGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHV-I--TEEEL-RRPE-MKNFFKDMPQP  241 (357)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHHTTCSEE-E--EHHHH-HSGG-GGGTTSSSCCC
T ss_pred             CCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHHhcCCcEE-E--ecCcc-hHHH-HHHHHhCCCCc
Confidence            588999999999999999888877899988887665432222223333343322 2  21111 0011 11111111258


Q ss_pred             cEEEEcCCC
Q 022103          109 DILVNNAGV  117 (302)
Q Consensus       109 d~lv~~aG~  117 (302)
                      |+++.++|.
T Consensus       242 Dvvid~~g~  250 (357)
T 1zsy_A          242 RLALNCVGG  250 (357)
T ss_dssp             SEEEESSCH
T ss_pred             eEEEECCCc
Confidence            999999885

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=96.41  E-value=0.0096  Score=55.96  Aligned_cols=43  Identities=21%  Similarity=0.154  Sum_probs=38.7

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRA   70 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~   70 (302)
                      .+++++|+|+|+ |.+|+.+++.+...|++|++++|+.++++..
T Consensus       169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~  211 (401)
T 1x13_A          169 KVPPAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQV  211 (401)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGGHHHH
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence            467999999997 8899999999999999999999999887664

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=96.38  E-value=0.067  Score=48.46  Aligned_cols=113  Identities=20%  Similarity=0.125  Sum_probs=69.0

Q ss_pred             EEEEeCCCchHHHHHHHHHHHc-C--CEEEEEecChhhHHHHHHHHhhCCCceeEEEe-eCCCHHHHHHHHHHHHhhCCC
Q 022103           32 IAIVTGANKGIGFALVKRLAEL-G--LTVILTARDVERGQRAVESLSEKGLPVNFFQL-DVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        32 ~vlItGas~gIG~ala~~l~~~-G--~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~-Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      .|.|+||+|.+|.+++..|+.+ +  .++++++.+. +.+..+..+.+....+.+... .-.+.+.+           ..
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~G~a~Dl~~~~~~~~v~~~~~~~~~~~~-----------~~   69 (312)
T 3hhp_A            2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTAVKIKGFSGEDATPAL-----------EG   69 (312)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THHHHHHHHHTSCSSEEEEEECSSCCHHHH-----------TT
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-CchhHHHHhhCCCCCceEEEecCCCcHHHh-----------CC
Confidence            4789999999999999999886 5  4799999987 444445555554222222211 11233333           37


Q ss_pred             ccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEec
Q 022103          108 LDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNIS  165 (302)
Q Consensus       108 id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vs  165 (302)
                      .|++|.+||....+  .++   -.+.++.|..-...+.+.+..+-    ..+.++++|
T Consensus        70 aDivii~ag~~rkp--G~~---R~dll~~N~~I~~~i~~~i~~~~----p~a~vlvvt  118 (312)
T 3hhp_A           70 ADVVLISAGVARKP--GMD---RSDLFNVNAGIVKNLVQQVAKTC----PKACIGIIT  118 (312)
T ss_dssp             CSEEEECCSCSCCT--TCC---HHHHHHHHHHHHHHHHHHHHHHC----TTSEEEECS
T ss_pred             CCEEEEeCCCCCCC--CCC---HHHHHHHHHHHHHHHHHHHHHHC----CCcEEEEec
Confidence            89999999976432  233   34456666655555555554431    235555554

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=96.35  E-value=0.012  Score=52.92  Aligned_cols=74  Identities=24%  Similarity=0.341  Sum_probs=53.0

Q ss_pred             cccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhh
Q 022103           25 KWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSN  104 (302)
Q Consensus        25 ~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~  104 (302)
                      ...+++++++|.|+ |.||+++++.|...|++|++.+|+.++.+...+    .+.  ..+  +.   .++.+++      
T Consensus       152 ~~~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~----~g~--~~~--~~---~~l~~~l------  213 (300)
T 2rir_A          152 DYTIHGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHLARITE----MGL--VPF--HT---DELKEHV------  213 (300)
T ss_dssp             SSCSTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----TTC--EEE--EG---GGHHHHS------
T ss_pred             CCCCCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----CCC--eEE--ch---hhHHHHh------
Confidence            35688999999997 889999999999999999999999876544322    232  222  11   2233222      


Q ss_pred             CCCccEEEEcCCC
Q 022103          105 FAALDILVNNAGV  117 (302)
Q Consensus       105 ~g~id~lv~~aG~  117 (302)
                       ...|+|+.+...
T Consensus       214 -~~aDvVi~~~p~  225 (300)
T 2rir_A          214 -KDIDICINTIPS  225 (300)
T ss_dssp             -TTCSEEEECCSS
T ss_pred             -hCCCEEEECCCh
Confidence             368999998875

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=96.33  E-value=0.054  Score=49.48  Aligned_cols=115  Identities=14%  Similarity=0.072  Sum_probs=72.8

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcCC--EEEEEecChhhHHHHHHHHhhC---CCceeEE-EeeCCCHHHHHHHHHHHH
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELGL--TVILTARDVERGQRAVESLSEK---GLPVNFF-QLDVSDPSSIEAFVSWFK  102 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G~--~V~l~~r~~~~~~~~~~~l~~~---~~~~~~~-~~Dlt~~~~~~~~~~~~~  102 (302)
                      +.+.+.|+|+ |.+|..+|..|+..|.  +|++++.+.++++..+..+.+.   ....... ..|..+            
T Consensus        20 ~~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~~------------   86 (330)
T 3ldh_A           20 SYNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYSV------------   86 (330)
T ss_dssp             CCCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSCS------------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHHH------------
Confidence            3467999999 9999999999999997  8999999988777665555432   1111222 223322            


Q ss_pred             hhCCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCC
Q 022103          103 SNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSR  167 (302)
Q Consensus       103 ~~~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~  167 (302)
                        +...|++|.+||....+  ..+.   .+.+..|..-...+.+.+..+    ...+.++++|--
T Consensus        87 --~~daDiVIitaG~p~kp--G~tR---~dll~~N~~I~k~i~~~I~k~----~P~a~ilvvtNP  140 (330)
T 3ldh_A           87 --SAGSKLVVITAGARQQE--GESR---LNLVQRNVNIFKFIIPNIVKH----SPDCLKELHPEL  140 (330)
T ss_dssp             --CSSCSEEEECCSCCCCS--SCCT---TGGGHHHHHHHHHHHHHHHHH----CTTCEEEECSSS
T ss_pred             --hCCCCEEEEeCCCCCCC--CCCH---HHHHHhhHHHHHHHHHHHHhh----CCCceEEeCCCc
Confidence              24789999999986432  1222   234555554444444444443    245677777643

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=96.31  E-value=0.0075  Score=56.90  Aligned_cols=58  Identities=14%  Similarity=0.150  Sum_probs=42.7

Q ss_pred             CcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHH
Q 022103           30 ETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSI   94 (302)
Q Consensus        30 ~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~   94 (302)
                      +..|+|.|. |-+|..+++.|.+.|+.|++++++++..+...+    .  .+.++.+|.++++.+
T Consensus         4 ~~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~----~--g~~vi~GDat~~~~L   61 (413)
T 3l9w_A            4 GMRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETLRK----F--GMKVFYGDATRMDLL   61 (413)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHH----T--TCCCEESCTTCHHHH
T ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHh----C--CCeEEEcCCCCHHHH
Confidence            346899997 779999999999999999999999987665432    1  233455555555543

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=96.30  E-value=0.039  Score=50.05  Aligned_cols=112  Identities=15%  Similarity=0.184  Sum_probs=66.7

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCC--EEEEEecChhhHHHHHHHHhhC----CCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           32 IAIVTGANKGIGFALVKRLAELGL--TVILTARDVERGQRAVESLSEK----GLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        32 ~vlItGas~gIG~ala~~l~~~G~--~V~l~~r~~~~~~~~~~~l~~~----~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      .+.|+|+ |.+|..++..|+..|.  +|++++++.++++..+..+.+.    +....+...|  +.+           .+
T Consensus         2 kv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~--~~~-----------a~   67 (314)
T 3nep_X            2 KVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTN--DYG-----------PT   67 (314)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEES--SSG-----------GG
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECC--CHH-----------Hh
Confidence            4788997 9999999999999987  8999999998776555555431    1122332222  222           22


Q ss_pred             CCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecC
Q 022103          106 AALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISS  166 (302)
Q Consensus       106 g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS  166 (302)
                      ...|++|.++|....+  ..+   -.+.+..|.--.    +.+.+.+.+....+.++++|-
T Consensus        68 ~~aDvVii~ag~~~kp--G~~---R~dl~~~N~~i~----~~i~~~i~~~~p~a~vivvtN  119 (314)
T 3nep_X           68 EDSDVCIITAGLPRSP--GMS---RDDLLAKNTEIV----GGVTEQFVEGSPDSTIIVVAN  119 (314)
T ss_dssp             TTCSEEEECCCC------------CHHHHHHHHHHH----HHHHHHHHTTCTTCEEEECCS
T ss_pred             CCCCEEEECCCCCCCC--CCC---HHHHHHhhHHHH----HHHHHHHHHhCCCcEEEecCC
Confidence            4789999999986432  122   334466665444    444444444334466666653

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=96.29  E-value=0.012  Score=54.39  Aligned_cols=79  Identities=22%  Similarity=0.270  Sum_probs=53.7

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCC-HHHHHHHHHHHHhhCC
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELGL-TVILTARDVERGQRAVESLSEKGLPVNFFQLDVSD-PSSIEAFVSWFKSNFA  106 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~-~~~~~~~~~~~~~~~g  106 (302)
                      +|.+|+|+|+ |+||...++.+...|+ +|++++++.++++.+ +++   |... +  .|..+ .+++.+.+.++..  +
T Consensus       191 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a-~~l---Ga~~-v--i~~~~~~~~~~~~i~~~t~--g  260 (373)
T 1p0f_A          191 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKA-IEL---GATE-C--LNPKDYDKPIYEVICEKTN--G  260 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHH-HHT---TCSE-E--ECGGGCSSCHHHHHHHHTT--S
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH-HHc---CCcE-E--EecccccchHHHHHHHHhC--C
Confidence            5789999996 8999999988887899 899999998887654 333   3321 2  23332 1223333333322  4


Q ss_pred             CccEEEEcCCC
Q 022103          107 ALDILVNNAGV  117 (302)
Q Consensus       107 ~id~lv~~aG~  117 (302)
                      .+|+++.++|.
T Consensus       261 g~Dvvid~~g~  271 (373)
T 1p0f_A          261 GVDYAVECAGR  271 (373)
T ss_dssp             CBSEEEECSCC
T ss_pred             CCCEEEECCCC
Confidence            79999999986

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=96.26  E-value=0.022  Score=51.69  Aligned_cols=111  Identities=18%  Similarity=0.187  Sum_probs=66.8

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHcCC--EEEEEecChhhHHHHHHHHhhCCC---ceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           31 TIAIVTGANKGIGFALVKRLAELGL--TVILTARDVERGQRAVESLSEKGL---PVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~G~--~V~l~~r~~~~~~~~~~~l~~~~~---~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      ..+.|+|+ |.+|..++..|+..|.  +|++++.+.++++..+..+.+...   .+.+. .  ++.+           .+
T Consensus         8 ~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~-~--~~~~-----------a~   72 (318)
T 1y6j_A            8 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLY-A--GDYS-----------DV   72 (318)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----CGG-----------GG
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEE-E--CCHH-----------Hh
Confidence            46888898 9999999999999987  899999998777665666654321   22111 1  1222           23


Q ss_pred             CCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEec
Q 022103          106 AALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNIS  165 (302)
Q Consensus       106 g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vs  165 (302)
                      ...|++|.++|....+  ..+   ..+.+..|+.-...+++.+.++   . ..+.|+++|
T Consensus        73 ~~aDvVii~~g~p~k~--g~~---r~dl~~~n~~i~~~i~~~i~~~---~-p~a~viv~t  123 (318)
T 1y6j_A           73 KDCDVIVVTAGANRKP--GET---RLDLAKKNVMIAKEVTQNIMKY---Y-NHGVILVVS  123 (318)
T ss_dssp             TTCSEEEECCCC--------C---HHHHHHHHHHHHHHHHHHHHHH---C-CSCEEEECS
T ss_pred             CCCCEEEEcCCCCCCC--CcC---HHHHHHhhHHHHHHHHHHHHHh---C-CCcEEEEec
Confidence            4789999999975422  122   2345666666666666666554   2 345566554

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*

Probab=96.23  E-value=0.071  Score=48.54  Aligned_cols=113  Identities=14%  Similarity=0.161  Sum_probs=70.1

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcCC--EEEEEecChhhHHHHHHHHhhCC---CceeEEEeeCCCHHHHHHHHHHHHh
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELGL--TVILTARDVERGQRAVESLSEKG---LPVNFFQLDVSDPSSIEAFVSWFKS  103 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G~--~V~l~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dlt~~~~~~~~~~~~~~  103 (302)
                      +...+.|+|+ |.+|..++..|+..+.  +|++++++.++++..+..+.+..   .++.+.. |  +.+.          
T Consensus         8 ~~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~-~--~~~a----------   73 (326)
T 2zqz_A            8 DHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYS-A--EYSD----------   73 (326)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEE-C--CGGG----------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEE-C--CHHH----------
Confidence            3367999999 9999999999999886  89999999988877666665431   2333332 2  2222          


Q ss_pred             hCCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEec
Q 022103          104 NFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNIS  165 (302)
Q Consensus       104 ~~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vs  165 (302)
                       +...|++|..+|....+  ..+.   .+.+..|.--...+++.+..+    ...+.|+++|
T Consensus        74 -~~~aDvVii~ag~~~k~--g~~R---~dl~~~n~~i~~~i~~~i~~~----~p~a~iiv~t  125 (326)
T 2zqz_A           74 -AKDADLVVITAGAPQKP--GETR---LDLVNKNLKILKSIVDPIVDS----GFNGIFLVAA  125 (326)
T ss_dssp             -GGGCSEEEECCCCC-------CH---HHHHHHHHHHHHHHHHHHHHH----TCCSEEEECS
T ss_pred             -hCCCCEEEEcCCCCCCC--CCCH---HHHHHHHHHHHHHHHHHHHHH----CCCeEEEEeC
Confidence             23689999999975432  2232   234555555444444444433    2345666654

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=96.23  E-value=0.01  Score=54.20  Aligned_cols=76  Identities=18%  Similarity=0.058  Sum_probs=51.5

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHhhC----CCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           31 TIAIVTGANKGIGFALVKRLAELGL-TVILTARDVERGQRAVESLSEK----GLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~----~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      .++.|.|+ |.+|.++|..|+..|+ +|++++++.++++.....+.+.    .....+..  .+|.+   +.+       
T Consensus        10 ~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~--t~d~~---ea~-------   76 (331)
T 1pzg_A           10 KKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRA--EYSYE---AAL-------   76 (331)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEE--ECSHH---HHH-------
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEE--eCCHH---HHh-------
Confidence            46889998 8999999999999998 9999999988777644433221    11111111  03332   122       


Q ss_pred             CCccEEEEcCCCCC
Q 022103          106 AALDILVNNAGVSF  119 (302)
Q Consensus       106 g~id~lv~~aG~~~  119 (302)
                      ...|++|.++|...
T Consensus        77 ~~aDiVi~a~g~p~   90 (331)
T 1pzg_A           77 TGADCVIVTAGLTK   90 (331)
T ss_dssp             TTCSEEEECCSCSS
T ss_pred             CCCCEEEEccCCCC
Confidence            26799999999754

>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A

Probab=96.22  E-value=0.016  Score=57.03  Aligned_cols=58  Identities=17%  Similarity=0.196  Sum_probs=45.4

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecCh-------------------hhHHHHHHHHhhCCCceeEEE
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGL-TVILTARDV-------------------ERGQRAVESLSEKGLPVNFFQ   85 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~   85 (302)
                      .+++.+|+|.|+ ||+|.++|+.|+..|. ++.+++++.                   .|.+.+++.+.+.++.+.+..
T Consensus       323 kL~~arVLIVGa-GGLGs~vA~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~dIG~~KAeaaa~~L~~iNP~V~v~~  400 (615)
T 4gsl_A          323 IIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATG  400 (615)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCBCCTTGGGTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEE
T ss_pred             HHhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCCCcccCcccccCCChhhcChHHHHHHHHHHHhhCCCcEEEE
Confidence            467889999999 7899999999999997 689988864                   466677777777665554433

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=96.21  E-value=0.018  Score=53.61  Aligned_cols=80  Identities=21%  Similarity=0.264  Sum_probs=54.1

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELGL-TVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      +|.+|+|.|+ |++|...++.+...|+ +|++++++.++++.+ +++   |.  .  ..|.++.+.+.+.+.++.. ...
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a-~~l---Ga--~--~i~~~~~~~~~~~v~~~t~-g~g  254 (398)
T 1kol_A          185 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHA-KAQ---GF--E--IADLSLDTPLHEQIAALLG-EPE  254 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH-HHT---TC--E--EEETTSSSCHHHHHHHHHS-SSC
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHH-HHc---CC--c--EEccCCcchHHHHHHHHhC-CCC
Confidence            5889999995 9999999888877899 799999998776654 333   43  2  2455443322222222211 126


Q ss_pred             ccEEEEcCCCC
Q 022103          108 LDILVNNAGVS  118 (302)
Q Consensus       108 id~lv~~aG~~  118 (302)
                      +|+++.++|..
T Consensus       255 ~Dvvid~~G~~  265 (398)
T 1kol_A          255 VDCAVDAVGFE  265 (398)
T ss_dssp             EEEEEECCCTT
T ss_pred             CCEEEECCCCc
Confidence            99999999864

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=96.21  E-value=0.055  Score=49.12  Aligned_cols=111  Identities=14%  Similarity=0.212  Sum_probs=66.3

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHcCC--EEEEEecChhhHHHHHHHHhhCC---CceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           31 TIAIVTGANKGIGFALVKRLAELGL--TVILTARDVERGQRAVESLSEKG---LPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~G~--~V~l~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      ..+.|+|+ |.+|..++..|+..+.  +|++++++.++++..+..+.+..   .++.+.. |  +.+           .+
T Consensus         6 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~-~--~~~-----------a~   70 (318)
T 1ez4_A            6 QKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYS-G--EYS-----------DC   70 (318)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEE-C--CGG-----------GG
T ss_pred             CEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEE-C--CHH-----------Hh
Confidence            57999999 9999999999999886  89999999888887666665431   2233332 2  222           23


Q ss_pred             CCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEec
Q 022103          106 AALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNIS  165 (302)
Q Consensus       106 g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vs  165 (302)
                      ...|++|..+|....+  ..+   ..+.+..|.--.    +.+.+.+.+....+.|+++|
T Consensus        71 ~~aDvVii~ag~~~~~--g~~---R~dl~~~n~~i~----~~i~~~i~~~~p~a~iiv~t  121 (318)
T 1ez4_A           71 KDADLVVITAGAPQKP--GES---RLDLVNKNLNIL----SSIVKPVVDSGFDGIFLVAA  121 (318)
T ss_dssp             TTCSEEEECCCC---------------CHHHHHHHH----HHHHHHHHHTTCCSEEEECS
T ss_pred             CCCCEEEECCCCCCCC--CCC---HHHHHHHHHHHH----HHHHHHHHHhCCCeEEEEeC
Confidence            4789999999975432  111   222344444433    33333333332445666654

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=96.17  E-value=0.017  Score=53.22  Aligned_cols=78  Identities=13%  Similarity=0.126  Sum_probs=52.2

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELGL-TVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      +|.+|+|+|+ |+||...++.+...|+ +|++++++.++++.+ +++.   ... +  .|..+.+ +.+.+.++.  .+.
T Consensus       190 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a-~~lG---a~~-v--i~~~~~~-~~~~~~~~~--~gg  258 (371)
T 1f8f_A          190 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELA-KQLG---ATH-V--INSKTQD-PVAAIKEIT--DGG  258 (371)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH-HHHT---CSE-E--EETTTSC-HHHHHHHHT--TSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH-HHcC---CCE-E--ecCCccC-HHHHHHHhc--CCC
Confidence            5789999995 8999999988877899 699999998776654 3443   221 2  2444332 222222221  136


Q ss_pred             ccEEEEcCCC
Q 022103          108 LDILVNNAGV  117 (302)
Q Consensus       108 id~lv~~aG~  117 (302)
                      +|+++.++|.
T Consensus       259 ~D~vid~~g~  268 (371)
T 1f8f_A          259 VNFALESTGS  268 (371)
T ss_dssp             EEEEEECSCC
T ss_pred             CcEEEECCCC
Confidence            9999999985

>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*

Probab=96.16  E-value=0.072  Score=47.85  Aligned_cols=111  Identities=14%  Similarity=0.054  Sum_probs=70.3

Q ss_pred             EEEeCCCchHHHHHHHHHHHcCC--EEEEEecChhhHHHHHHHHhhC----CCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           33 AIVTGANKGIGFALVKRLAELGL--TVILTARDVERGQRAVESLSEK----GLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        33 vlItGas~gIG~ala~~l~~~G~--~V~l~~r~~~~~~~~~~~l~~~----~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      |.|+|+ |+||..+|..|+.++.  ++++++.+.++.+-.+..+.+.    +........  .|.++           +.
T Consensus         3 V~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~--~d~~~-----------~~   68 (294)
T 2x0j_A            3 LGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADYSL-----------LK   68 (294)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEE--SCGGG-----------GT
T ss_pred             EEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecC--CCHHH-----------hC
Confidence            678895 9999999999999874  7999999987766655555542    222222222  12222           23


Q ss_pred             CccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecC
Q 022103          107 ALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISS  166 (302)
Q Consensus       107 ~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS  166 (302)
                      .-|++|..||....+  .++.+   +.++.|..    +.+.+.+.+.+....+.++.+|-
T Consensus        69 ~aDvVvitAG~prkp--GmtR~---dLl~~Na~----I~~~i~~~i~~~~p~aivlvvsN  119 (294)
T 2x0j_A           69 GSEIIVVTAGLARKP--GMTRL---DLAHKNAG----IIKDIAKKIVENAPESKILVVTN  119 (294)
T ss_dssp             TCSEEEECCCCCCCS--SSCHH---HHHHHHHH----HHHHHHHHHHTTSTTCEEEECSS
T ss_pred             CCCEEEEecCCCCCC--CCchH---HHHHHHHH----HHHHHHHHHHhcCCceEEEEecC
Confidence            689999999986542  24443   45666654    45555555555434556666653

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=96.14  E-value=0.061  Score=48.49  Aligned_cols=75  Identities=21%  Similarity=0.174  Sum_probs=51.8

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHhhC----CCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           31 TIAIVTGANKGIGFALVKRLAELGL-TVILTARDVERGQRAVESLSEK----GLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~----~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      .++.|+|+ |.+|..++..|+..|. +|++++++.++++..+..+.+.    .....+...  +|.+.           +
T Consensus         3 ~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d~~a-----------~   68 (309)
T 1ur5_A            3 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGT--NNYAD-----------T   68 (309)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SCGGG-----------G
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEEC--CCHHH-----------H
Confidence            46899999 9999999999999996 9999999988777655555442    112222210  22222           2


Q ss_pred             CCccEEEEcCCCCC
Q 022103          106 AALDILVNNAGVSF  119 (302)
Q Consensus       106 g~id~lv~~aG~~~  119 (302)
                      ...|++|.++|...
T Consensus        69 ~~aD~Vi~a~g~p~   82 (309)
T 1ur5_A           69 ANSDVIVVTSGAPR   82 (309)
T ss_dssp             TTCSEEEECCCC--
T ss_pred             CCCCEEEEcCCCCC
Confidence            36899999999754

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=96.12  E-value=0.065  Score=48.54  Aligned_cols=113  Identities=17%  Similarity=0.184  Sum_probs=68.4

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcCC--EEEEEecChhhHHHHHHHHhhC----CCceeEEEeeCCCHHHHHHHHHHHH
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELGL--TVILTARDVERGQRAVESLSEK----GLPVNFFQLDVSDPSSIEAFVSWFK  102 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G~--~V~l~~r~~~~~~~~~~~l~~~----~~~~~~~~~Dlt~~~~~~~~~~~~~  102 (302)
                      +...+.|+|+ |.+|..++..|+.+|.  +|++++.+.++++..+..+.+.    +.++.+..   .+.+.         
T Consensus         5 ~~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~---~~~~a---------   71 (317)
T 3d0o_A            5 KGNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKA---GEYSD---------   71 (317)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEE---CCGGG---------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEe---CCHHH---------
Confidence            4467899998 9999999999999884  8999999987776544444321    12333332   22222         


Q ss_pred             hhCCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEec
Q 022103          103 SNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNIS  165 (302)
Q Consensus       103 ~~~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vs  165 (302)
                        +...|++|..+|....+  ..+.   .+.+..|.--...+++.+..    ....+.|+++|
T Consensus        72 --~~~aDvVvi~ag~~~~~--g~~r---~dl~~~n~~i~~~i~~~i~~----~~p~a~viv~t  123 (317)
T 3d0o_A           72 --CHDADLVVICAGAAQKP--GETR---LDLVSKNLKIFKSIVGEVMA----SKFDGIFLVAT  123 (317)
T ss_dssp             --GTTCSEEEECCCCCCCT--TCCH---HHHHHHHHHHHHHHHHHHHH----TTCCSEEEECS
T ss_pred             --hCCCCEEEECCCCCCCC--CCcH---HHHHHHHHHHHHHHHHHHHH----hCCCcEEEEec
Confidence              24789999999985432  2232   23445554444444444433    32345566554

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=96.08  E-value=0.042  Score=51.20  Aligned_cols=86  Identities=16%  Similarity=0.166  Sum_probs=57.5

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeC-----------CCHHHHH
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDV-----------SDPSSIE   95 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl-----------t~~~~~~   95 (302)
                      ..++++|+|.|+ |.+|..+++.+...|++|++++|+.++++...+ +   |.+  ++..|+           ...+...
T Consensus       181 ~v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~-l---Ga~--~~~l~~~~~~~~gya~~~~~~~~~  253 (381)
T 3p2y_A          181 TVKPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQVRS-V---GAQ--WLDLGIDAAGEGGYARELSEAERA  253 (381)
T ss_dssp             EECCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHH-T---TCE--ECCCC-------------CHHHHH
T ss_pred             CcCCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c---CCe--EEeccccccccccchhhhhHHHHh
Confidence            357889999999 789999999999999999999999988776544 2   322  222211           0011122


Q ss_pred             HHHHHHHhhCCCccEEEEcCCCCC
Q 022103           96 AFVSWFKSNFAALDILVNNAGVSF  119 (302)
Q Consensus        96 ~~~~~~~~~~g~id~lv~~aG~~~  119 (302)
                      .-.+.+.+.....|++|.++....
T Consensus       254 ~~~~~l~e~l~~aDIVI~tv~iPg  277 (381)
T 3p2y_A          254 QQQQALEDAITKFDIVITTALVPG  277 (381)
T ss_dssp             HHHHHHHHHHTTCSEEEECCCCTT
T ss_pred             hhHHHHHHHHhcCCEEEECCCCCC
Confidence            223333344457899999886643

>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A

Probab=96.07  E-value=0.091  Score=47.44  Aligned_cols=111  Identities=20%  Similarity=0.178  Sum_probs=71.1

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcC--CEEEEEecChhhHHHHHHHHhhCC---CceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           32 IAIVTGANKGIGFALVKRLAELG--LTVILTARDVERGQRAVESLSEKG---LPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        32 ~vlItGas~gIG~ala~~l~~~G--~~V~l~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      .+.|+|+ |.+|..++..|+..+  .+|++++.+.++++..+..+.+..   .++.+.. +  +.+.           +.
T Consensus         2 KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~-~--~~~a-----------~~   66 (310)
T 2xxj_A            2 KVGIVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVWA-G--SYGD-----------LE   66 (310)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEEE-C--CGGG-----------GT
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEEE-C--CHHH-----------hC
Confidence            5889998 999999999999987  589999999888887666665531   2233332 2  3332           24


Q ss_pred             CccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecC
Q 022103          107 ALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISS  166 (302)
Q Consensus       107 ~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS  166 (302)
                      ..|++|..+|....+  ..+..   +.+..|.--...+++.+..+    ...+.|+++|-
T Consensus        67 ~aD~Vii~ag~~~~~--g~~r~---dl~~~n~~i~~~i~~~i~~~----~p~a~iiv~tN  117 (310)
T 2xxj_A           67 GARAVVLAAGVAQRP--GETRL---QLLDRNAQVFAQVVPRVLEA----APEAVLLVATN  117 (310)
T ss_dssp             TEEEEEECCCCCCCT--TCCHH---HHHHHHHHHHHHHHHHHHHH----CTTCEEEECSS
T ss_pred             CCCEEEECCCCCCCC--CcCHH---HHHHhhHHHHHHHHHHHHHH----CCCcEEEEecC
Confidence            789999999976432  23333   34555554444444444433    24466666654

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=96.01  E-value=0.023  Score=52.89  Aligned_cols=80  Identities=18%  Similarity=0.258  Sum_probs=53.5

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELGL-TVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      +|.+|+|.|+ |+||...++.+...|+ +|++++++.++++.+ +   +.|.  .+  .|..+.+.+.+.+.++.. ...
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a-~---~lGa--~~--i~~~~~~~~~~~~~~~~~-g~g  254 (398)
T 2dph_A          185 PGSHVYIAGA-GPVGRCAAAGARLLGAACVIVGDQNPERLKLL-S---DAGF--ET--IDLRNSAPLRDQIDQILG-KPE  254 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH-H---TTTC--EE--EETTSSSCHHHHHHHHHS-SSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH-H---HcCC--cE--EcCCCcchHHHHHHHHhC-CCC
Confidence            5889999997 9999999888877899 899999998876543 2   2343  22  355443221222222211 126


Q ss_pred             ccEEEEcCCCC
Q 022103          108 LDILVNNAGVS  118 (302)
Q Consensus       108 id~lv~~aG~~  118 (302)
                      +|++|.++|..
T Consensus       255 ~Dvvid~~g~~  265 (398)
T 2dph_A          255 VDCGVDAVGFE  265 (398)
T ss_dssp             EEEEEECSCTT
T ss_pred             CCEEEECCCCc
Confidence            99999999864

>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}

Probab=96.00  E-value=0.053  Score=48.94  Aligned_cols=111  Identities=18%  Similarity=0.227  Sum_probs=66.8

Q ss_pred             EEEeCCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHhhC----CCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           33 AIVTGANKGIGFALVKRLAELGL-TVILTARDVERGQRAVESLSEK----GLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        33 vlItGas~gIG~ala~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~----~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      +.|+|+ |.+|..++..|+..|. +|++++++.++++..+..+.+.    +....+...  +|.+.           +..
T Consensus         2 I~IiGa-G~vG~~~a~~l~~~~l~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d~~a-----------~~~   67 (308)
T 2d4a_B            2 ITILGA-GKVGMATAVMLMMRGYDDLLLIARTPGKPQGEALDLAHAAAELGVDIRISGS--NSYED-----------MRG   67 (308)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCSCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEE--SCGGG-----------GTT
T ss_pred             EEEECc-CHHHHHHHHHHHhCCCCEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEEEC--CCHHH-----------hCC
Confidence            788998 9999999999999888 6999999988877655555442    222223221  22221           237


Q ss_pred             ccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecC
Q 022103          108 LDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISS  166 (302)
Q Consensus       108 id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS  166 (302)
                      .|++|..+|....+  ..+..   +.+..|.--.    +.+.+.+.+....+.++++|-
T Consensus        68 aD~Vi~~ag~~~k~--G~~r~---dl~~~n~~i~----~~i~~~i~~~~p~a~iiv~tN  117 (308)
T 2d4a_B           68 SDIVLVTAGIGRKP--GMTRE---QLLEANANTM----ADLAEKIKAYAKDAIVVITTN  117 (308)
T ss_dssp             CSEEEECCSCCCCS--SCCTH---HHHHHHHHHH----HHHHHHHHHHCTTCEEEECCS
T ss_pred             CCEEEEeCCCCCCC--CCcHH---HHHHHHHHHH----HHHHHHHHHHCCCeEEEEeCC
Confidence            89999999976432  23322   2344444333    333333333223456666543

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=96.00  E-value=0.021  Score=53.23  Aligned_cols=44  Identities=16%  Similarity=0.160  Sum_probs=38.9

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAV   71 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~   71 (302)
                      .+++++|+|+|+ |++|+.+++.+...|++|++++|+..+++...
T Consensus       169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~  212 (384)
T 1l7d_A          169 TVPPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVE  212 (384)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHH
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            568999999997 89999999999999999999999987766543

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=95.97  E-value=0.016  Score=55.39  Aligned_cols=73  Identities=18%  Similarity=0.233  Sum_probs=58.1

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCccEE
Q 022103           32 IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDIL  111 (302)
Q Consensus        32 ~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id~l  111 (302)
                      .++|.|+ |-+|..+|+.|.++|+.|++++++++.++...+.+     .+.++.+|-++++-++++--      ...|++
T Consensus         5 ~iiI~G~-G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~-----~~~~i~Gd~~~~~~L~~Agi------~~ad~~   72 (461)
T 4g65_A            5 KIIILGA-GQVGGTLAENLVGENNDITIVDKDGDRLRELQDKY-----DLRVVNGHASHPDVLHEAGA------QDADML   72 (461)
T ss_dssp             EEEEECC-SHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS-----SCEEEESCTTCHHHHHHHTT------TTCSEE
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc-----CcEEEEEcCCCHHHHHhcCC------CcCCEE
Confidence            4788888 67999999999999999999999998887766544     46788999999987765421      367888


Q ss_pred             EEcCC
Q 022103          112 VNNAG  116 (302)
Q Consensus       112 v~~aG  116 (302)
                      +...+
T Consensus        73 ia~t~   77 (461)
T 4g65_A           73 VAVTN   77 (461)
T ss_dssp             EECCS
T ss_pred             EEEcC
Confidence            77654

>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A

Probab=95.96  E-value=0.021  Score=56.12  Aligned_cols=57  Identities=18%  Similarity=0.195  Sum_probs=44.3

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecC-------------------hhhHHHHHHHHhhCCCceeEE
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGL-TVILTARD-------------------VERGQRAVESLSEKGLPVNFF   84 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~-------------------~~~~~~~~~~l~~~~~~~~~~   84 (302)
                      .+++++|+|.|+ ||+|.++|+.|++.|. ++.+++.+                   ..|.+.+++.+++.+..+.+.
T Consensus       324 kL~~~kVLIVGa-GGLGs~va~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~DvG~~KAeaaa~~L~~iNP~v~v~  400 (598)
T 3vh1_A          324 IIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDAT  400 (598)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHTTTCCEEEEECCSBCCTTSTTTSTTCCSTTCSSBHHHHHHHHHHHHCTTCEEE
T ss_pred             HHhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccchhhcCcHHHHHHHHHHHhHCCCcEEE
Confidence            467889999998 7799999999999997 68888654                   246777777777765554433

>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*

Probab=95.96  E-value=0.098  Score=47.28  Aligned_cols=75  Identities=20%  Similarity=0.333  Sum_probs=52.5

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHcCC--EEEEEecChhhHHHHHHHHhhCCC----ceeEEEeeCCCHHHHHHHHHHHHhh
Q 022103           31 TIAIVTGANKGIGFALVKRLAELGL--TVILTARDVERGQRAVESLSEKGL----PVNFFQLDVSDPSSIEAFVSWFKSN  104 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~G~--~V~l~~r~~~~~~~~~~~l~~~~~----~~~~~~~Dlt~~~~~~~~~~~~~~~  104 (302)
                      +++.|+|+ |.+|..++..|+..|.  +|++++++.++++..+..+.+...    .+.+..   .+.+           .
T Consensus         7 ~kI~IIGa-G~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~---~~~~-----------a   71 (316)
T 1ldn_A            7 ARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWH---GDYD-----------D   71 (316)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEE---CCGG-----------G
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEc---CcHH-----------H
Confidence            57999999 9999999999999885  899999998766654444443211    233332   2222           2


Q ss_pred             CCCccEEEEcCCCCCC
Q 022103          105 FAALDILVNNAGVSFN  120 (302)
Q Consensus       105 ~g~id~lv~~aG~~~~  120 (302)
                      +...|++|.++|....
T Consensus        72 l~~aDvViia~~~~~~   87 (316)
T 1ldn_A           72 CRDADLVVICAGANQK   87 (316)
T ss_dssp             TTTCSEEEECCSCCCC
T ss_pred             hCCCCEEEEcCCCCCC
Confidence            3478999999998643

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=95.94  E-value=0.015  Score=52.01  Aligned_cols=42  Identities=19%  Similarity=0.168  Sum_probs=37.4

Q ss_pred             cccccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecCh
Q 022103           23 STKWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDV   64 (302)
Q Consensus        23 ~~~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~   64 (302)
                      .+...++||+++|.|.++-+|+.+|..|.+.|++|.++.|..
T Consensus       153 ~~~i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t  194 (285)
T 3p2o_A          153 AYEIDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKT  194 (285)
T ss_dssp             HTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC
T ss_pred             HhCCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCc
Confidence            345679999999999999999999999999999999987653

>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*

Probab=95.92  E-value=0.081  Score=48.05  Aligned_cols=75  Identities=15%  Similarity=0.115  Sum_probs=52.3

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHhhC----CCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           31 TIAIVTGANKGIGFALVKRLAELGL-TVILTARDVERGQRAVESLSEK----GLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~----~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      +++.|+|+ |.+|..++..|+..|. +|++++++.++++.....+.+.    .....+...  +|.+.           +
T Consensus         5 ~kI~VIGa-G~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t--~d~~a-----------l   70 (322)
T 1t2d_A            5 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGS--NTYDD-----------L   70 (322)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEE--CCGGG-----------G
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEEC--CCHHH-----------h
Confidence            46889998 8999999999999998 9999999988777655555431    112222210  22221           2


Q ss_pred             CCccEEEEcCCCCC
Q 022103          106 AALDILVNNAGVSF  119 (302)
Q Consensus       106 g~id~lv~~aG~~~  119 (302)
                      ...|++|.++|...
T Consensus        71 ~~aD~Vi~a~g~p~   84 (322)
T 1t2d_A           71 AGADVVIVTAGFTK   84 (322)
T ss_dssp             TTCSEEEECCSCSS
T ss_pred             CCCCEEEEeCCCCC
Confidence            37899999999754

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=95.90  E-value=0.013  Score=53.47  Aligned_cols=80  Identities=13%  Similarity=0.106  Sum_probs=52.2

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGL-TVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      -+|.+|+|+|+ |+||...++.+...|+ +|++++++.++++. ++++.   ...   ..|..+.+..+++.+ +-. ..
T Consensus       165 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~-~~~lG---a~~---vi~~~~~~~~~~v~~-~t~-g~  234 (352)
T 3fpc_A          165 KLGDTVCVIGI-GPVGLMSVAGANHLGAGRIFAVGSRKHCCDI-ALEYG---ATD---IINYKNGDIVEQILK-ATD-GK  234 (352)
T ss_dssp             CTTCCEEEECC-SHHHHHHHHHHHTTTCSSEEEECCCHHHHHH-HHHHT---CCE---EECGGGSCHHHHHHH-HTT-TC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHH-HHHhC---Cce---EEcCCCcCHHHHHHH-HcC-CC
Confidence            35889999986 8999999888888899 79999998877653 34443   221   233333322222222 211 12


Q ss_pred             CccEEEEcCCC
Q 022103          107 ALDILVNNAGV  117 (302)
Q Consensus       107 ~id~lv~~aG~  117 (302)
                      .+|+++.++|.
T Consensus       235 g~D~v~d~~g~  245 (352)
T 3fpc_A          235 GVDKVVIAGGD  245 (352)
T ss_dssp             CEEEEEECSSC
T ss_pred             CCCEEEECCCC
Confidence            69999999887

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=95.88  E-value=0.014  Score=53.60  Aligned_cols=73  Identities=18%  Similarity=0.276  Sum_probs=50.6

Q ss_pred             cEEEEeCCCchHHHHH-HHHH-HHcCCE-EEEEecChh---hHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhh
Q 022103           31 TIAIVTGANKGIGFAL-VKRL-AELGLT-VILTARDVE---RGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSN  104 (302)
Q Consensus        31 k~vlItGas~gIG~al-a~~l-~~~G~~-V~l~~r~~~---~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~  104 (302)
                      .+|+|+|+ |++|... ++.+ ...|++ |++++++.+   +++.+ +++   |.  ..+  |..+.+ +.+ +.++   
T Consensus       174 ~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~-~~l---Ga--~~v--~~~~~~-~~~-i~~~---  239 (357)
T 2b5w_A          174 SSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDII-EEL---DA--TYV--DSRQTP-VED-VPDV---  239 (357)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHH-HHT---TC--EEE--ETTTSC-GGG-HHHH---
T ss_pred             CEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHH-HHc---CC--ccc--CCCccC-HHH-HHHh---
Confidence            89999999 9999998 7666 567997 999999887   66543 333   32  222  554432 333 3333   


Q ss_pred             CCCccEEEEcCCC
Q 022103          105 FAALDILVNNAGV  117 (302)
Q Consensus       105 ~g~id~lv~~aG~  117 (302)
                      .+.+|++|.++|.
T Consensus       240 ~gg~Dvvid~~g~  252 (357)
T 2b5w_A          240 YEQMDFIYEATGF  252 (357)
T ss_dssp             SCCEEEEEECSCC
T ss_pred             CCCCCEEEECCCC
Confidence            2479999999985

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=95.88  E-value=0.029  Score=51.05  Aligned_cols=79  Identities=18%  Similarity=0.232  Sum_probs=52.1

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHc-CCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAEL-GLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~-G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      -+|.+++|.|+ |++|...++.+... |.+|++++++.++++.+ +++   |.... +  |-.+ +..+++.+....  .
T Consensus       170 ~~g~~vlv~Ga-G~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~-~~l---Ga~~~-i--~~~~-~~~~~v~~~t~g--~  238 (345)
T 3jv7_A          170 GPGSTAVVIGV-GGLGHVGIQILRAVSAARVIAVDLDDDRLALA-REV---GADAA-V--KSGA-GAADAIRELTGG--Q  238 (345)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESCHHHHHHH-HHT---TCSEE-E--ECST-THHHHHHHHHGG--G
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH-HHc---CCCEE-E--cCCC-cHHHHHHHHhCC--C
Confidence            45889999998 99999988877766 78999999998876644 333   33322 2  2222 222222222211  2


Q ss_pred             CccEEEEcCCC
Q 022103          107 ALDILVNNAGV  117 (302)
Q Consensus       107 ~id~lv~~aG~  117 (302)
                      .+|+++.++|.
T Consensus       239 g~d~v~d~~G~  249 (345)
T 3jv7_A          239 GATAVFDFVGA  249 (345)
T ss_dssp             CEEEEEESSCC
T ss_pred             CCeEEEECCCC
Confidence            79999999986

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1

Probab=95.85  E-value=0.017  Score=53.60  Aligned_cols=47  Identities=21%  Similarity=0.176  Sum_probs=42.1

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHH
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESL   74 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l   74 (302)
                      +++||+++|.|. |.+|..+|+.|.+.|++|++.+++.+++++.+++.
T Consensus       170 ~L~GktV~V~G~-G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~  216 (364)
T 1leh_A          170 SLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEE  216 (364)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH
T ss_pred             CCCcCEEEEECc-hHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHc
Confidence            689999999998 77999999999999999999999998887776664

>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*

Probab=95.82  E-value=0.12  Score=46.49  Aligned_cols=101  Identities=22%  Similarity=0.154  Sum_probs=61.1

Q ss_pred             EEEEeCCCchHHHHHHHHHHHc--CCEEEEEecChhhHHHHHHHHhhC----CCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           32 IAIVTGANKGIGFALVKRLAEL--GLTVILTARDVERGQRAVESLSEK----GLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        32 ~vlItGas~gIG~ala~~l~~~--G~~V~l~~r~~~~~~~~~~~l~~~----~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      ++.|.|+ |.+|..++..|++.  |++|++++++.++++.....+.+.    .....+..  .+|.++           +
T Consensus         2 kI~VIGa-G~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~--t~d~~~-----------l   67 (310)
T 1guz_A            2 KITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTG--SNDYAD-----------T   67 (310)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEE--ESCGGG-----------G
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEE--CCCHHH-----------H
Confidence            4788998 99999999999985  789999999988777554333321    11111111  123221           2


Q ss_pred             CCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhh
Q 022103          106 AALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPL  151 (302)
Q Consensus       106 g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~  151 (302)
                      ...|++|.+++....+  ..+   ..+.+..|..-...+++.+.++
T Consensus        68 ~~aDvViiav~~p~~~--g~~---r~dl~~~n~~i~~~i~~~i~~~  108 (310)
T 1guz_A           68 ANSDIVIITAGLPRKP--GMT---REDLLMKNAGIVKEVTDNIMKH  108 (310)
T ss_dssp             TTCSEEEECCSCCCCT--TCC---HHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCCCC--CCC---HHHHHHHHHHHHHHHHHHHHHh
Confidence            3689999999864321  122   2234455555444555555444

>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1

Probab=95.79  E-value=0.058  Score=48.81  Aligned_cols=73  Identities=19%  Similarity=0.246  Sum_probs=50.8

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCC--EEEEEecChhhHHHHHHHHhhC---CCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           32 IAIVTGANKGIGFALVKRLAELGL--TVILTARDVERGQRAVESLSEK---GLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        32 ~vlItGas~gIG~ala~~l~~~G~--~V~l~~r~~~~~~~~~~~l~~~---~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      ++.|.|+ |.+|.+++..|++.|+  +|++++++.++++.....+.+.   .....+..   ++.+.           +.
T Consensus         2 kI~VIGa-G~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~~---~d~~~-----------~~   66 (319)
T 1a5z_A            2 KIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYA---GDYAD-----------LK   66 (319)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEE---CCGGG-----------GT
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEEe---CCHHH-----------hC
Confidence            5789998 9999999999999999  9999999988777655444321   11112211   23221           13


Q ss_pred             CccEEEEcCCCCC
Q 022103          107 ALDILVNNAGVSF  119 (302)
Q Consensus       107 ~id~lv~~aG~~~  119 (302)
                      ..|++|.+++...
T Consensus        67 ~aDvViiav~~~~   79 (319)
T 1a5z_A           67 GSDVVIVAAGVPQ   79 (319)
T ss_dssp             TCSEEEECCCCCC
T ss_pred             CCCEEEEccCCCC
Confidence            6899999998754

>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}

Probab=95.77  E-value=0.14  Score=46.52  Aligned_cols=75  Identities=21%  Similarity=0.211  Sum_probs=51.1

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHhhC----CCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           31 TIAIVTGANKGIGFALVKRLAELGL-TVILTARDVERGQRAVESLSEK----GLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~----~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      +.+.|.|+ |.+|..+|..|+..|+ +|++++++.++++.....+.+.    .....+...  +|.+.           +
T Consensus        15 ~kI~ViGa-G~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t--~d~~a-----------l   80 (328)
T 2hjr_A           15 KKISIIGA-GQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGE--NNYEY-----------L   80 (328)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEE--SCGGG-----------G
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEEC--CCHHH-----------H
Confidence            47899998 8999999999999998 9999999988777544333221    111111110  22221           2


Q ss_pred             CCccEEEEcCCCCC
Q 022103          106 AALDILVNNAGVSF  119 (302)
Q Consensus       106 g~id~lv~~aG~~~  119 (302)
                      ...|++|.++|...
T Consensus        81 ~~aD~VI~avg~p~   94 (328)
T 2hjr_A           81 QNSDVVIITAGVPR   94 (328)
T ss_dssp             TTCSEEEECCSCCC
T ss_pred             CCCCEEEEcCCCCC
Confidence            36899999999754

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=95.75  E-value=0.05  Score=51.05  Aligned_cols=45  Identities=18%  Similarity=0.138  Sum_probs=39.4

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHH
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVE   72 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~   72 (302)
                      ..++.+|+|.|+ |.+|..+++.+...|++|++++++..+++...+
T Consensus       187 ~v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~  231 (405)
T 4dio_A          187 TVPAAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQVAS  231 (405)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHH
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH
Confidence            357889999999 789999999999999999999999988666544

>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A

Probab=95.75  E-value=0.1  Score=47.08  Aligned_cols=39  Identities=21%  Similarity=0.103  Sum_probs=34.5

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHH
Q 022103           31 TIAIVTGANKGIGFALVKRLAELGL-TVILTARDVERGQRA   70 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~~~~~~~~   70 (302)
                      .++.|.|+ |.+|..+|..|++.|+ +|++++++.++++..
T Consensus         5 ~kI~VIGa-G~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~   44 (317)
T 2ewd_A            5 RKIAVIGS-GQIGGNIAYIVGKDNLADVVLFDIAEGIPQGK   44 (317)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCchHHHHH
Confidence            46889998 8999999999999998 999999998777654

>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}

Probab=95.72  E-value=0.075  Score=46.32  Aligned_cols=86  Identities=17%  Similarity=0.261  Sum_probs=56.7

Q ss_pred             CcEEEEeCCCchHHHHHHHHHHHcCCE-EEEEecChhhHHHHHHHHh--------hCCCceeEEEeeCCCHHHHHHHHHH
Q 022103           30 ETIAIVTGANKGIGFALVKRLAELGLT-VILTARDVERGQRAVESLS--------EKGLPVNFFQLDVSDPSSIEAFVSW  100 (302)
Q Consensus        30 ~k~vlItGas~gIG~ala~~l~~~G~~-V~l~~r~~~~~~~~~~~l~--------~~~~~~~~~~~Dlt~~~~~~~~~~~  100 (302)
                      +.++.|.|+ |.+|..+++.|++.|++ |.+++|+.++.+...+.+.        +.-..+.++..-+ ....+.+++++
T Consensus        10 ~m~i~iiG~-G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~av-~~~~~~~v~~~   87 (266)
T 3d1l_A           10 DTPIVLIGA-GNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYTTDLAEVNPYAKLYIVSL-KDSAFAELLQG   87 (266)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEESCGGGSCSCCSEEEECC-CHHHHHHHHHH
T ss_pred             CCeEEEEcC-CHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCceeCCHHHHhcCCCEEEEec-CHHHHHHHHHH
Confidence            346888887 88999999999999998 8899999988777666532        1001122222222 23456778887


Q ss_pred             HHhhCCCccEEEEcCCC
Q 022103          101 FKSNFAALDILVNNAGV  117 (302)
Q Consensus       101 ~~~~~g~id~lv~~aG~  117 (302)
                      +.....+=.+++++++.
T Consensus        88 l~~~~~~~~ivv~~s~~  104 (266)
T 3d1l_A           88 IVEGKREEALMVHTAGS  104 (266)
T ss_dssp             HHTTCCTTCEEEECCTT
T ss_pred             HHhhcCCCcEEEECCCC
Confidence            76654333467777654

>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A

Probab=95.71  E-value=0.017  Score=53.31  Aligned_cols=81  Identities=23%  Similarity=0.331  Sum_probs=57.9

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecCh-------------------hhHHHHHHHHhhCCC--ceeEE
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGL-TVILTARDV-------------------ERGQRAVESLSEKGL--PVNFF   84 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~~-------------------~~~~~~~~~l~~~~~--~~~~~   84 (302)
                      .+++++|+|.|+ ||+|.++++.|+..|. ++.+++++.                   .|.+.+.+.+.+.++  ++..+
T Consensus       115 ~L~~~~VlvvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~  193 (353)
T 3h5n_A          115 KLKNAKVVILGC-GGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSEISVSEI  193 (353)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred             HHhCCeEEEECC-CHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCCCCeEEEe
Confidence            367889999998 7899999999999997 799998863                   255566666665554  44566


Q ss_pred             EeeCCCHHHHHHHHHHHHhhCCCccEEEEcCC
Q 022103           85 QLDVSDPSSIEAFVSWFKSNFAALDILVNNAG  116 (302)
Q Consensus        85 ~~Dlt~~~~~~~~~~~~~~~~g~id~lv~~aG  116 (302)
                      ..+++...++.       . +...|+||.+..
T Consensus       194 ~~~i~~~~~~~-------~-~~~~DlVvd~~D  217 (353)
T 3h5n_A          194 ALNINDYTDLH-------K-VPEADIWVVSAD  217 (353)
T ss_dssp             ECCCCSGGGGG-------G-SCCCSEEEECCC
T ss_pred             ecccCchhhhh-------H-hccCCEEEEecC
Confidence            66666554222       2 457898888653

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=95.61  E-value=0.011  Score=53.50  Aligned_cols=77  Identities=21%  Similarity=0.228  Sum_probs=50.7

Q ss_pred             Cc-EEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCc
Q 022103           30 ET-IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAAL  108 (302)
Q Consensus        30 ~k-~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~i  108 (302)
                      |. +++|+|++|++|...++.+...|++|++++++.++++.+ +++.   ... ++  |..+.+  ...+.++  ..+.+
T Consensus       150 g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~-~~lG---a~~-v~--~~~~~~--~~~~~~~--~~~~~  218 (330)
T 1tt7_A          150 EKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYL-KQLG---ASE-VI--SREDVY--DGTLKAL--SKQQW  218 (330)
T ss_dssp             GGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHH-HHHT---CSE-EE--EHHHHC--SSCCCSS--CCCCE
T ss_pred             CCceEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHcC---CcE-EE--ECCCch--HHHHHHh--hcCCc
Confidence            44 799999999999999998888899999999998776654 3343   222 12  222110  0001111  11368


Q ss_pred             cEEEEcCCC
Q 022103          109 DILVNNAGV  117 (302)
Q Consensus       109 d~lv~~aG~  117 (302)
                      |+++.++|.
T Consensus       219 d~vid~~g~  227 (330)
T 1tt7_A          219 QGAVDPVGG  227 (330)
T ss_dssp             EEEEESCCT
T ss_pred             cEEEECCcH
Confidence            999999884

>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}

Probab=95.60  E-value=0.063  Score=47.64  Aligned_cols=84  Identities=14%  Similarity=0.110  Sum_probs=56.5

Q ss_pred             CcEEEEeCCCchHHHHHHHHHHHcCC---EEEEEecChhhHHHHHHHHhh----------CCCceeEEEeeCCCHHHHHH
Q 022103           30 ETIAIVTGANKGIGFALVKRLAELGL---TVILTARDVERGQRAVESLSE----------KGLPVNFFQLDVSDPSSIEA   96 (302)
Q Consensus        30 ~k~vlItGas~gIG~ala~~l~~~G~---~V~l~~r~~~~~~~~~~~l~~----------~~~~~~~~~~Dlt~~~~~~~   96 (302)
                      .+++.|.|+ |-+|.++++.|++.|+   +|++++|+.++++...++..-          ...++.++.+   .++.+.+
T Consensus         3 ~~~I~iIG~-G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~~~~~~~~~~aDvVilav---~p~~~~~   78 (280)
T 3tri_A            3 TSNITFIGG-GNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTTQDNRQGALNADVVVLAV---KPHQIKM   78 (280)
T ss_dssp             CSCEEEESC-SHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEESCHHHHHSSCSEEEECS---CGGGHHH
T ss_pred             CCEEEEEcc-cHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEeCChHHHHhcCCeEEEEe---CHHHHHH
Confidence            356788888 7899999999999998   899999999887776654210          1223333333   3566777


Q ss_pred             HHHHHHhh-CCCccEEEEcCCC
Q 022103           97 FVSWFKSN-FAALDILVNNAGV  117 (302)
Q Consensus        97 ~~~~~~~~-~g~id~lv~~aG~  117 (302)
                      +++++... +..=.+++.+++.
T Consensus        79 vl~~l~~~~l~~~~iiiS~~ag  100 (280)
T 3tri_A           79 VCEELKDILSETKILVISLAVG  100 (280)
T ss_dssp             HHHHHHHHHHTTTCEEEECCTT
T ss_pred             HHHHHHhhccCCCeEEEEecCC
Confidence            77777654 3322367766543

>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A

Probab=95.57  E-value=0.045  Score=50.64  Aligned_cols=68  Identities=10%  Similarity=0.128  Sum_probs=50.8

Q ss_pred             ccccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHH
Q 022103           24 TKWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSW  100 (302)
Q Consensus        24 ~~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~  100 (302)
                      .+.-+++++++|.|+ |.+|+.+++.+.+.|++|++++.+.....   .++     --..+..|..|.+.+.+++++
T Consensus         6 ~~~~~~~~~IlIlG~-G~lg~~la~aa~~lG~~viv~d~~~~~p~---~~~-----ad~~~~~~~~d~~~l~~~~~~   73 (377)
T 3orq_A            6 FNKLKFGATIGIIGG-GQLGKMMAQSAQKMGYKVVVLDPSEDCPC---RYV-----AHEFIQAKYDDEKALNQLGQK   73 (377)
T ss_dssp             CCCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCTTCTT---GGG-----SSEEEECCTTCHHHHHHHHHH
T ss_pred             cccCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCChh---hhh-----CCEEEECCCCCHHHHHHHHHh
Confidence            344568899999997 66999999999999999999988753210   000     114567899999988888763

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=95.56  E-value=0.059  Score=47.64  Aligned_cols=42  Identities=12%  Similarity=0.173  Sum_probs=36.9

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHH
Q 022103           31 TIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVE   72 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~   72 (302)
                      .++.|.|++|.+|.++++.|.+.|++|++++|+.++.+...+
T Consensus        12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~   53 (286)
T 3c24_A           12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQG   53 (286)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHh
Confidence            469999999999999999999999999999999877665543

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=95.54  E-value=0.0079  Score=54.78  Aligned_cols=85  Identities=18%  Similarity=0.069  Sum_probs=57.5

Q ss_pred             ccccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCcee-EEEeeCCCHHHHHHHHHHHH
Q 022103           24 TKWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVN-FFQLDVSDPSSIEAFVSWFK  102 (302)
Q Consensus        24 ~~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~-~~~~Dlt~~~~~~~~~~~~~  102 (302)
                      +..+++|++++|.|++.-+|+.+|+.|+..|++|.+++|+..++.....++.   .... ......++++++.+.+.   
T Consensus       171 ~g~~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la---~~~~~~t~~~~t~~~~L~e~l~---  244 (320)
T 1edz_A          171 EGNRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLK---LNKHHVEDLGEYSEDLLKKCSL---  244 (320)
T ss_dssp             TTCTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSS---CCCCEEEEEEECCHHHHHHHHH---
T ss_pred             cCCCCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHh---hhcccccccccccHhHHHHHhc---
Confidence            3457899999999998888999999999999999999888432221111111   1111 11112244566666666   


Q ss_pred             hhCCCccEEEEcCCCC
Q 022103          103 SNFAALDILVNNAGVS  118 (302)
Q Consensus       103 ~~~g~id~lv~~aG~~  118 (302)
                          ..|+||..+|..
T Consensus       245 ----~ADIVIsAtg~p  256 (320)
T 1edz_A          245 ----DSDVVITGVPSE  256 (320)
T ss_dssp             ----HCSEEEECCCCT
T ss_pred             ----cCCEEEECCCCC
Confidence                469999999874

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*

Probab=95.50  E-value=0.016  Score=49.33  Aligned_cols=38  Identities=24%  Similarity=0.377  Sum_probs=33.2

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHH
Q 022103           31 TIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQR   69 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~   69 (302)
                      .++.|.| +|.+|.++++.|++.|++|++++|+.++.+.
T Consensus        29 ~~I~iiG-~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~   66 (215)
T 2vns_A           29 PKVGILG-SGDFARSLATRLVGSGFKVVVGSRNPKRTAR   66 (215)
T ss_dssp             CCEEEEC-CSHHHHHHHHHHHHTTCCEEEEESSHHHHHH
T ss_pred             CEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence            4688888 7999999999999999999999999876543

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=95.50  E-value=0.017  Score=52.48  Aligned_cols=72  Identities=14%  Similarity=0.190  Sum_probs=56.1

Q ss_pred             CcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCcc
Q 022103           30 ETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALD  109 (302)
Q Consensus        30 ~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id  109 (302)
                      .+.++|.|+ |.+|+.+++.|.++|+ |+++++++++.+ ..+      ..+.++.+|.++++.++++      ...+.|
T Consensus       115 ~~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~------~~~~~i~gd~~~~~~L~~a------~i~~a~  179 (336)
T 1lnq_A          115 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKK-VLR------SGANFVHGDPTRVSDLEKA------NVRGAR  179 (336)
T ss_dssp             -CEEEEESC-CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HHH------TTCEEEESCTTSHHHHHHT------CSTTEE
T ss_pred             cCCEEEECC-cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HHh------CCcEEEEeCCCCHHHHHhc------Chhhcc
Confidence            457999997 8899999999999999 999999988766 322      2578899999999987644      123678


Q ss_pred             EEEEcCC
Q 022103          110 ILVNNAG  116 (302)
Q Consensus       110 ~lv~~aG  116 (302)
                      .++.+.+
T Consensus       180 ~vi~~~~  186 (336)
T 1lnq_A          180 AVIVDLE  186 (336)
T ss_dssp             EEEECCS
T ss_pred             EEEEcCC
Confidence            8887654

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=95.45  E-value=0.02  Score=51.50  Aligned_cols=74  Identities=20%  Similarity=0.182  Sum_probs=50.3

Q ss_pred             CcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCcc
Q 022103           30 ETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALD  109 (302)
Q Consensus        30 ~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id  109 (302)
                      |+ ++|+|++|++|...++.+...|++|++++++.++++.+. ++   |....+   |..+.+.    .+++  ..+.+|
T Consensus       148 g~-VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~-~l---Ga~~vi---~~~~~~~----~~~~--~~~~~d  213 (324)
T 3nx4_A          148 GE-VVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLK-SL---GANRIL---SRDEFAE----SRPL--EKQLWA  213 (324)
T ss_dssp             CC-EEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHH-HH---TCSEEE---EGGGSSC----CCSS--CCCCEE
T ss_pred             Ce-EEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hc---CCCEEE---ecCCHHH----HHhh--cCCCcc
Confidence            45 999999999999999999889999999999988876553 34   323222   2222211    1111  114689


Q ss_pred             EEEEcCCC
Q 022103          110 ILVNNAGV  117 (302)
Q Consensus       110 ~lv~~aG~  117 (302)
                      +++.++|.
T Consensus       214 ~v~d~~g~  221 (324)
T 3nx4_A          214 GAIDTVGD  221 (324)
T ss_dssp             EEEESSCH
T ss_pred             EEEECCCc
Confidence            99888764

>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}

Probab=95.41  E-value=0.06  Score=45.55  Aligned_cols=78  Identities=10%  Similarity=0.137  Sum_probs=49.9

Q ss_pred             ccccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHh
Q 022103           24 TKWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKS  103 (302)
Q Consensus        24 ~~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~  103 (302)
                      .+..+..+++.|.| .|.+|.+++..|++.|++|++++|+.+       .  -...++.++.+  . ...++++++++..
T Consensus        13 ~~~~~~~~~I~iiG-~G~mG~~la~~l~~~g~~V~~~~~~~~-------~--~~~aD~vi~av--~-~~~~~~v~~~l~~   79 (209)
T 2raf_A           13 ENLYFQGMEITIFG-KGNMGQAIGHNFEIAGHEVTYYGSKDQ-------A--TTLGEIVIMAV--P-YPALAALAKQYAT   79 (209)
T ss_dssp             -------CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECTTCC-------C--SSCCSEEEECS--C-HHHHHHHHHHTHH
T ss_pred             cccccCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCCHH-------H--hccCCEEEEcC--C-cHHHHHHHHHHHH
Confidence            35667888999999 588999999999999999999999875       1  11234444443  3 5667777777755


Q ss_pred             hCCCccEEEEcC
Q 022103          104 NFAALDILVNNA  115 (302)
Q Consensus       104 ~~g~id~lv~~a  115 (302)
                      .+. =.+++.++
T Consensus        80 ~~~-~~~vi~~~   90 (209)
T 2raf_A           80 QLK-GKIVVDIT   90 (209)
T ss_dssp             HHT-TSEEEECC
T ss_pred             hcC-CCEEEEEC
Confidence            433 23555544

>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1

Probab=95.40  E-value=0.15  Score=45.72  Aligned_cols=73  Identities=14%  Similarity=0.146  Sum_probs=51.3

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcC--CEEEEEecChhhHHHHHHHHhhC----CCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           32 IAIVTGANKGIGFALVKRLAELG--LTVILTARDVERGQRAVESLSEK----GLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        32 ~vlItGas~gIG~ala~~l~~~G--~~V~l~~r~~~~~~~~~~~l~~~----~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      ++.|.| +|.+|..++..|++.|  .+|++++|+.++++.....+.+.    +..+....   ++.+.           +
T Consensus         3 kI~VIG-aG~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~---~d~~~-----------~   67 (309)
T 1hyh_A            3 KIGIIG-LGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVI---NDWAA-----------L   67 (309)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEE---SCGGG-----------G
T ss_pred             EEEEEC-CCHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEEe---CCHHH-----------h
Confidence            588899 6889999999999999  79999999998877766544321    11223222   23221           1


Q ss_pred             CCccEEEEcCCCCC
Q 022103          106 AALDILVNNAGVSF  119 (302)
Q Consensus       106 g~id~lv~~aG~~~  119 (302)
                      ...|++|.+++...
T Consensus        68 ~~aDvViiav~~~~   81 (309)
T 1hyh_A           68 ADADVVISTLGNIK   81 (309)
T ss_dssp             TTCSEEEECCSCGG
T ss_pred             CCCCEEEEecCCcc
Confidence            36899999998743

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=95.40  E-value=0.05  Score=47.58  Aligned_cols=78  Identities=17%  Similarity=0.262  Sum_probs=58.3

Q ss_pred             EEEEeCCCchHHHHHHHHHHHc-CCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCccE
Q 022103           32 IAIVTGANKGIGFALVKRLAEL-GLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDI  110 (302)
Q Consensus        32 ~vlItGas~gIG~ala~~l~~~-G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id~  110 (302)
                      +++|.|++|.+|+.+++.+.+. |++|+.+....+.++....    ..  .. +..|++.++.+.+.+..+.+.  .+++
T Consensus         2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~~----~~--~D-vvIDfT~p~a~~~~~~~a~~~--g~~~   72 (245)
T 1p9l_A            2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLTD----GN--TE-VVIDFTHPDVVMGNLEFLIDN--GIHA   72 (245)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHHH----TT--CC-EEEECSCTTTHHHHHHHHHHT--TCEE
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHhc----cC--Cc-EEEEccChHHHHHHHHHHHHc--CCCE
Confidence            4899999999999999999876 8998766554444443322    11  22 668999999988888887765  6788


Q ss_pred             EEEcCCCC
Q 022103          111 LVNNAGVS  118 (302)
Q Consensus       111 lv~~aG~~  118 (302)
                      |+...|..
T Consensus        73 VigTTG~~   80 (245)
T 1p9l_A           73 VVGTTGFT   80 (245)
T ss_dssp             EECCCCCC
T ss_pred             EEcCCCCC
Confidence            98888864

>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}

Probab=95.39  E-value=0.032  Score=53.00  Aligned_cols=78  Identities=19%  Similarity=0.245  Sum_probs=54.0

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      ++++|.++|.|. |+.|.++|+.|.++|++|.+.+++........+.+.+.|.  .++.....+ +    .       +.
T Consensus         6 ~~~~k~v~viG~-G~sG~s~A~~l~~~G~~V~~~D~~~~~~~~~~~~L~~~gi--~~~~g~~~~-~----~-------~~   70 (451)
T 3lk7_A            6 TFENKKVLVLGL-ARSGEAAARLLAKLGAIVTVNDGKPFDENPTAQSLLEEGI--KVVCGSHPL-E----L-------LD   70 (451)
T ss_dssp             TTTTCEEEEECC-TTTHHHHHHHHHHTTCEEEEEESSCGGGCHHHHHHHHTTC--EEEESCCCG-G----G-------GG
T ss_pred             hcCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEeCCcccCChHHHHHHhCCC--EEEECCChH-H----h-------hc
Confidence            467899999999 7899999999999999999999976432233455655543  333322211 1    1       12


Q ss_pred             C-ccEEEEcCCCCC
Q 022103          107 A-LDILVNNAGVSF  119 (302)
Q Consensus       107 ~-id~lv~~aG~~~  119 (302)
                      . +|.||.+.|+..
T Consensus        71 ~~~d~vv~spgi~~   84 (451)
T 3lk7_A           71 EDFCYMIKNPGIPY   84 (451)
T ss_dssp             SCEEEEEECTTSCT
T ss_pred             CCCCEEEECCcCCC
Confidence            3 899999999864

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=95.36  E-value=0.033  Score=49.77  Aligned_cols=73  Identities=22%  Similarity=0.347  Sum_probs=51.9

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      ..++|++++|.|+ |.||+++++.|...|++|++++|+.++.+...    +.+.  ..+  +.   +++.+++       
T Consensus       151 ~~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~----~~g~--~~~--~~---~~l~~~l-------  211 (293)
T 3d4o_A          151 FTIHGANVAVLGL-GRVGMSVARKFAALGAKVKVGARESDLLARIA----EMGM--EPF--HI---SKAAQEL-------  211 (293)
T ss_dssp             SCSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH----HTTS--EEE--EG---GGHHHHT-------
T ss_pred             CCCCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH----HCCC--eec--Ch---hhHHHHh-------
Confidence            4688999999996 88999999999999999999999987654332    2232  222  22   2233222       


Q ss_pred             CCccEEEEcCCC
Q 022103          106 AALDILVNNAGV  117 (302)
Q Consensus       106 g~id~lv~~aG~  117 (302)
                      ...|+|+.++..
T Consensus       212 ~~aDvVi~~~p~  223 (293)
T 3d4o_A          212 RDVDVCINTIPA  223 (293)
T ss_dssp             TTCSEEEECCSS
T ss_pred             cCCCEEEECCCh
Confidence            368999998753

>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*

Probab=95.36  E-value=0.23  Score=44.38  Aligned_cols=101  Identities=21%  Similarity=0.202  Sum_probs=60.7

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHcCC--EEEEEecChhhHHHHHHHHhhC---CCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           31 TIAIVTGANKGIGFALVKRLAELGL--TVILTARDVERGQRAVESLSEK---GLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~G~--~V~l~~r~~~~~~~~~~~l~~~---~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      .++.|.|+ |.+|..++..|++.|+  +|++++|+.++++.....+.+.   .....+...  ++.+.           +
T Consensus         8 mkI~IiGa-G~vG~~~a~~l~~~g~~~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~-----------~   73 (319)
T 1lld_A            8 TKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGS--DDPEI-----------C   73 (319)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEE--SCGGG-----------G
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHhhhhhcCCeEEEeC--CCHHH-----------h
Confidence            46899998 8999999999999998  9999999987665322222111   112222211  12221           2


Q ss_pred             CCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhh
Q 022103          106 AALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLP  150 (302)
Q Consensus       106 g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~  150 (302)
                      ...|++|.+++....+  ..+.   .+.+..|..-...+++.+.+
T Consensus        74 ~~aD~Vii~v~~~~~~--g~~r---~~~~~~n~~~~~~~~~~i~~  113 (319)
T 1lld_A           74 RDADMVVITAGPRQKP--GQSR---LELVGATVNILKAIMPNLVK  113 (319)
T ss_dssp             TTCSEEEECCCCCCCT--TCCH---HHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCC--CCCH---HHHHHHHHHHHHHHHHHHHH
Confidence            3689999999864321  1222   23455555545555555555

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=95.35  E-value=0.04  Score=49.23  Aligned_cols=41  Identities=32%  Similarity=0.150  Sum_probs=36.6

Q ss_pred             cccccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecC
Q 022103           23 STKWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARD   63 (302)
Q Consensus        23 ~~~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~   63 (302)
                      ++...++||+++|.|.++-+|+.+|..|...|++|.++.+.
T Consensus       154 ~~~i~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~  194 (286)
T 4a5o_A          154 STGADLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRF  194 (286)
T ss_dssp             HTTCCCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTT
T ss_pred             HhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCC
Confidence            34567999999999999889999999999999999988764

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=95.35  E-value=0.041  Score=49.55  Aligned_cols=43  Identities=16%  Similarity=0.105  Sum_probs=37.7

Q ss_pred             ccccccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecCh
Q 022103           22 SSTKWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDV   64 (302)
Q Consensus        22 ~~~~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~   64 (302)
                      ..+...++||+++|.|.++-+|+.+|+.|.+.|++|.++.|..
T Consensus       157 ~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T  199 (300)
T 4a26_A          157 KRCGIEMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGT  199 (300)
T ss_dssp             HHHTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTS
T ss_pred             HHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCC
Confidence            3445679999999999988899999999999999999988743

>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*

Probab=95.32  E-value=0.042  Score=52.79  Aligned_cols=48  Identities=19%  Similarity=0.217  Sum_probs=38.1

Q ss_pred             cccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHH
Q 022103           25 KWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVES   73 (302)
Q Consensus        25 ~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~   73 (302)
                      -..++++++.|.|. |.+|.++|+.|++.|++|++.+|+.++.+...++
T Consensus        10 ~~~~~~~~IgvIGl-G~MG~~lA~~La~~G~~V~v~~r~~~~~~~l~~~   57 (480)
T 2zyd_A           10 HHHMSKQQIGVVGM-AVMGRNLALNIESRGYTVSIFNRSREKTEEVIAE   57 (480)
T ss_dssp             -----CBSEEEECC-SHHHHHHHHHHHTTTCCEEEECSSHHHHHHHHHH
T ss_pred             ccccCCCeEEEEcc-HHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHhh
Confidence            34567788999987 7799999999999999999999999888776654

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=95.32  E-value=0.035  Score=49.62  Aligned_cols=42  Identities=21%  Similarity=0.158  Sum_probs=36.8

Q ss_pred             ccccccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecC
Q 022103           22 SSTKWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARD   63 (302)
Q Consensus        22 ~~~~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~   63 (302)
                      ..+..+++||+++|.|.++-+|+.+|+.|...|++|.++.|.
T Consensus       153 ~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~  194 (285)
T 3l07_A          153 REYGIKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRF  194 (285)
T ss_dssp             HHTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred             HHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCC
Confidence            334567999999999998889999999999999999988764

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=95.28  E-value=0.05  Score=48.88  Aligned_cols=42  Identities=19%  Similarity=0.159  Sum_probs=35.7

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHH
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAV   71 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~   71 (302)
                      +-.++.|.|. |-+|..+|+.|++.|++|++.+|+.++.+...
T Consensus        20 ~m~~I~iIG~-G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~   61 (310)
T 3doj_A           20 HMMEVGFLGL-GIMGKAMSMNLLKNGFKVTVWNRTLSKCDELV   61 (310)
T ss_dssp             CSCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSGGGGHHHH
T ss_pred             cCCEEEEECc-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH
Confidence            3357888875 78999999999999999999999998776654

>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*

Probab=95.26  E-value=0.028  Score=49.29  Aligned_cols=70  Identities=29%  Similarity=0.238  Sum_probs=52.8

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      .++++ +++|.|+ |++|+++++.|.+.|++|.+++|+.++.+...++...   .       ..+.++   +        
T Consensus       113 ~~l~~-~v~iiG~-G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~~~---~-------~~~~~~---~--------  169 (263)
T 2d5c_A          113 IPLKG-PALVLGA-GGAGRAVAFALREAGLEVWVWNRTPQRALALAEEFGL---R-------AVPLEK---A--------  169 (263)
T ss_dssp             CCCCS-CEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHTC---E-------ECCGGG---G--------
T ss_pred             CCCCC-eEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcc---c-------hhhHhh---c--------
Confidence            45778 8999997 7799999999999999999999999887777665531   1       122221   1        


Q ss_pred             CCccEEEEcCCCC
Q 022103          106 AALDILVNNAGVS  118 (302)
Q Consensus       106 g~id~lv~~aG~~  118 (302)
                      ...|+||++.+..
T Consensus       170 ~~~Divi~~tp~~  182 (263)
T 2d5c_A          170 REARLLVNATRVG  182 (263)
T ss_dssp             GGCSEEEECSSTT
T ss_pred             cCCCEEEEccCCC
Confidence            2579999998764

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=95.24  E-value=0.053  Score=48.00  Aligned_cols=86  Identities=16%  Similarity=0.084  Sum_probs=54.8

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHH-hhC------CCceeEEEeeCCCHHHHHHHH---HH
Q 022103           31 TIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESL-SEK------GLPVNFFQLDVSDPSSIEAFV---SW  100 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l-~~~------~~~~~~~~~Dlt~~~~~~~~~---~~  100 (302)
                      +++.|.|. |.+|..+++.|++.|++|++.+|+.++.+...+.- ...      -....++..=+.+...+++++   ++
T Consensus         2 ~~i~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~   80 (287)
T 3pef_A            2 QKFGFIGL-GIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAALGAERAATPCEVVESCPVTFAMLADPAAAEEVCFGKHG   80 (287)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTC
T ss_pred             CEEEEEee-cHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEcCCHHHHHHHHcCcch
Confidence            46778886 88999999999999999999999998776654320 000      001233333445566677776   55


Q ss_pred             HHhhCCCccEEEEcCCC
Q 022103          101 FKSNFAALDILVNNAGV  117 (302)
Q Consensus       101 ~~~~~g~id~lv~~aG~  117 (302)
                      +.....+=.++|++.+.
T Consensus        81 l~~~l~~~~~vi~~st~   97 (287)
T 3pef_A           81 VLEGIGEGRGYVDMSTV   97 (287)
T ss_dssp             HHHHCCTTCEEEECSCC
T ss_pred             HhhcCCCCCEEEeCCCC
Confidence            55544333456666443

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=95.22  E-value=0.083  Score=47.19  Aligned_cols=85  Identities=8%  Similarity=0.040  Sum_probs=53.1

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHh--------hCCCceeEEEeeCCCHHHHHHHH---H
Q 022103           31 TIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLS--------EKGLPVNFFQLDVSDPSSIEAFV---S   99 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~--------~~~~~~~~~~~Dlt~~~~~~~~~---~   99 (302)
                      +++.|.|. |.+|..+++.|++.|++|++++|+.++.+...+.-.        +.-....++..-+.+...++.++   +
T Consensus         8 ~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~e~~~~aDvvi~~vp~~~~~~~v~~~~~   86 (303)
T 3g0o_A            8 FHVGIVGL-GSMGMGAARSCLRAGLSTWGADLNPQACANLLAEGACGAAASAREFAGVVDALVILVVNAAQVRQVLFGED   86 (303)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEESSSTTTTTTCSEEEECCSSHHHHHHHHC--C
T ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccCCHHHHHhcCCEEEEECCCHHHHHHHHhChh
Confidence            46777775 889999999999999999999999988776654210        00012233444445555566655   4


Q ss_pred             HHHhhCCCccEEEEcCC
Q 022103          100 WFKSNFAALDILVNNAG  116 (302)
Q Consensus       100 ~~~~~~g~id~lv~~aG  116 (302)
                      ++.....+=.++|+++.
T Consensus        87 ~l~~~l~~g~ivv~~st  103 (303)
T 3g0o_A           87 GVAHLMKPGSAVMVSST  103 (303)
T ss_dssp             CCGGGSCTTCEEEECSC
T ss_pred             hHHhhCCCCCEEEecCC
Confidence            44443333345555544

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=95.19  E-value=0.056  Score=48.24  Aligned_cols=85  Identities=12%  Similarity=0.131  Sum_probs=58.5

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHH-------hhCCCceeEEEeeCCCHHHHHHHHHHHHh
Q 022103           31 TIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESL-------SEKGLPVNFFQLDVSDPSSIEAFVSWFKS  103 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l-------~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~  103 (302)
                      +++.|.|. |.+|..+|+.|++.|++|++++|++++.+...+.-       .+.-. ..++..-+.+...++++++++..
T Consensus        16 ~~I~vIG~-G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~-aDvvi~~vp~~~~~~~v~~~l~~   93 (296)
T 3qha_A           16 LKLGYIGL-GNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEAGATLADSVADVAA-ADLIHITVLDDAQVREVVGELAG   93 (296)
T ss_dssp             CCEEEECC-STTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHTTCEECSSHHHHTT-SSEEEECCSSHHHHHHHHHHHHT
T ss_pred             CeEEEECc-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCEEcCCHHHHHh-CCEEEEECCChHHHHHHHHHHHH
Confidence            45777775 78999999999999999999999998776654320       00011 33444455667778888887776


Q ss_pred             hCCCccEEEEcCCC
Q 022103          104 NFAALDILVNNAGV  117 (302)
Q Consensus       104 ~~g~id~lv~~aG~  117 (302)
                      ...+=.++|++...
T Consensus        94 ~l~~g~ivv~~st~  107 (296)
T 3qha_A           94 HAKPGTVIAIHSTI  107 (296)
T ss_dssp             TCCTTCEEEECSCC
T ss_pred             hcCCCCEEEEeCCC
Confidence            55444566666544

>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*

Probab=95.16  E-value=0.29  Score=45.40  Aligned_cols=119  Identities=13%  Similarity=0.046  Sum_probs=67.4

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcCC--E---EEEEecCh----hhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHH
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELGL--T---VILTARDV----ERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVS   99 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G~--~---V~l~~r~~----~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~   99 (302)
                      +...|.|+||+|.||.+++..|+..+.  +   |++.+.+.    ++++..+-.+++...... ....+++.+       
T Consensus        31 ~~~KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~~~~~~~~~G~amDL~h~~~p~~-~~v~i~~~~-------  102 (375)
T 7mdh_A           31 KLVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLL-REVSIGIDP-------  102 (375)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTE-EEEEEESCH-------
T ss_pred             CCCEEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEecCccchhhhhHHHHHhHHhhhhhhc-CCcEEecCC-------
Confidence            345799999999999999999998864  2   66654433    345555556655332111 111222111       


Q ss_pred             HHHhhCCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcC-CCCCcEEEecC
Q 022103          100 WFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRS-PSKSRILNISS  166 (302)
Q Consensus       100 ~~~~~~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~-~~~~~iv~vsS  166 (302)
                        .+.+...|++|..||....+  .++   ..+.++.|..=    .+.+.+.+.+. ...+.|+.+|-
T Consensus       103 --y~~~~daDvVVitag~prkp--G~t---R~DLl~~N~~I----~k~i~~~i~~~a~p~~ivlVvsN  159 (375)
T 7mdh_A          103 --YEVFEDVDWALLIGAKPRGP--GME---RAALLDINGQI----FADQGKALNAVASKNVKVLVVGN  159 (375)
T ss_dssp             --HHHTTTCSEEEECCCCCCCT--TCC---HHHHHHHHHHH----HHHHHHHHHHHSCTTCEEEECSS
T ss_pred             --HHHhCCCCEEEEcCCCCCCC--CCC---HHHHHHHHHHH----HHHHHHHHHHhcCCCeEEEEecC
Confidence              12234789999999975432  233   34456666543    34444444431 23466666653

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=95.12  E-value=0.08  Score=47.77  Aligned_cols=87  Identities=10%  Similarity=0.143  Sum_probs=53.8

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHH-------hhCCCceeEEEeeCCCHHHHHHHHH--
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESL-------SEKGLPVNFFQLDVSDPSSIEAFVS--   99 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l-------~~~~~~~~~~~~Dlt~~~~~~~~~~--   99 (302)
                      +.+++.|.|. |.+|..+|+.|++.|++|++++|+.++.+...+.-       .+.-....++..-+.+...++.++.  
T Consensus        30 ~~~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v~~~~  108 (320)
T 4dll_A           30 YARKITFLGT-GSMGLPMARRLCEAGYALQVWNRTPARAASLAALGATIHEQARAAARDADIVVSMLENGAVVQDVLFAQ  108 (320)
T ss_dssp             CCSEEEEECC-TTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCEEESSHHHHHTTCSEEEECCSSHHHHHHHHTTT
T ss_pred             CCCEEEEECc-cHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCEeeCCHHHHHhcCCEEEEECCCHHHHHHHHcch
Confidence            3457888876 78999999999999999999999998776654320       0000012233333455556666664  


Q ss_pred             HHHhhCCCccEEEEcCC
Q 022103          100 WFKSNFAALDILVNNAG  116 (302)
Q Consensus       100 ~~~~~~g~id~lv~~aG  116 (302)
                      ++.....+=.++|.+..
T Consensus       109 ~~~~~l~~~~~vi~~st  125 (320)
T 4dll_A          109 GVAAAMKPGSLFLDMAS  125 (320)
T ss_dssp             CHHHHCCTTCEEEECSC
T ss_pred             hHHhhCCCCCEEEecCC
Confidence            44443333345555544

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	302
d1wmaa1	275	c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox	1e-55
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	1e-44
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	1e-41
d1yb1a_	244	c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase	7e-40
d1spxa_	264	c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato	9e-40
d1ydea1	250	c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase	1e-37
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	3e-37
d1hxha_	253	c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge	2e-36
d2ew8a1	247	c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas	4e-36
d1sbya1	254	c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase	5e-36
d2ae2a_	259	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	5e-36
d1zk4a1	251	c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase	1e-35
d1xkqa_	272	c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh	2e-35
d2bgka1	268	c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de	2e-35
d1hdca_	254	c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr	2e-35
d1h5qa_	260	c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga	3e-35
d1xq1a_	259	c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara	4e-35
d2gdza1	254	c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog	6e-35
d1xhla_	274	c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh	8e-35
d1vl8a_	251	c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga	3e-34
d2rhca1	257	c.2.1.2 (A:5-261) beta-keto acyl carrier protein r	5e-34
d1cyda_	242	c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul	3e-33
d1fmca_	255	c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase	6e-33
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	1e-32
d1ulsa_	242	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	5e-31
d2bd0a1	240	c.2.1.2 (A:2-241) Bacterial sepiapterin reductase	7e-31
d1ja9a_	259	c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc	2e-30
d1zmta1	252	c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag	2e-30
d1nffa_	244	c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob	4e-30
d1yxma1	297	c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re	5e-30
d1gz6a_	302	c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do	7e-30
d1gega_	255	c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl	1e-29
d1oaaa_	259	c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus mus	2e-29
d2c07a1	251	c.2.1.2 (A:54-304) beta-keto acyl carrier protein	2e-29
d1bdba_	276	c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy	3e-29
d1xu9a_	269	c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase	7e-29
d1geea_	261	c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat	2e-28
d2a4ka1	241	c.2.1.2 (A:2-242) beta-keto acyl carrier protein r	3e-28
d1iy8a_	258	c.2.1.2 (A:) Levodione reductase {Corynebacterium	1e-27
d1ae1a_	258	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	2e-27
d1snya_	248	c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly	2e-27
d1zema1	260	c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba	2e-27
d1w6ua_	294	c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr	5e-27
d1g0oa_	272	c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase	6e-27
d1edoa_	244	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	2e-26
d1x1ta1	260	c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge	8e-26
d1k2wa_	256	c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s	6e-25
d1q7ba_	243	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	8e-25
d1jtva_	285	c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi	3e-24
d2ag5a1	245	c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami	2e-23
d1mxha_	266	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	9e-23
d1uzma1	237	c.2.1.2 (A:9-245) beta-keto acyl carrier protein r	3e-21
d1uaya_	241	c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogena	2e-20
d1o5ia_	234	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	6e-20
d1ulua_	256	c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermoph	2e-19
d2o23a1	248	c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydr	8e-18
d1qsga_	258	c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli	1e-17
d1ooea_	235	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	1e-16
d1fjha_	257	c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase	1e-16
d1dhra_	236	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	2e-16
d1e7wa_	284	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	7e-14
d2pd4a1	274	c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacte	5e-13
d1jaya_	212	c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase	8e-12
d2fr1a1	259	c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI	9e-10
d2h7ma1	268	c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacteri	9e-10
d1luaa1	191	c.2.1.7 (A:98-288) Methylene-tetrahydromethanopter	1e-09
d1uh5a_	329	c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite	3e-08
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	8e-08
d1d7oa_	297	c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (B	1e-07
d1kewa_	361	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	2e-06
d1xgka_	350	c.2.1.2 (A:) Negative transcriptional regulator Nm	3e-06
d1udca_	338	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	5e-06
d1y1pa1	342	c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo	5e-06
d1orra_	338	c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella	1e-05
d1n7ha_	339	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cr	9e-05
d1rpna_	321	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo	1e-04
d1t2aa_	347	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H	1e-04
d1rkxa_	356	c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia	1e-04
d1oc2a_	346	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	2e-04
d1e6ua_	315	c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras	2e-04
d2c5aa1	363	c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T	3e-04
d1z45a2	347	c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep	3e-04
d1vl0a_	281	c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD	3e-04
d1qyca_	307	c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta	5e-04
d1hdoa_	205	c.2.1.2 (A:) Biliverdin IX beta reductase {Human (	5e-04
d2b69a1	312	c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1	6e-04
d1n2sa_	298	c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reduct	7e-04
d1qyda_	312	c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {	0.002
d2q46a1	252	c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (	0.004

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  179 bits (454), Expect = 1e-55
 Identities = 90/268 (33%), Positives = 148/268 (55%), Gaps = 13/268 (4%)

Query: 32  IAIVTGANKGIGFALVKRLAEL-GLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSD 90
           +A+VTG NKGIG A+V+ L  L    V+LTARDV RGQ AV+ L  +GL   F QLD+ D
Sbjct: 5   VALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDD 64

Query: 91  PSSIEAFVSWFKSNFAALDILVNNAGVSF-NDIYKNTVEHAETVIRTNFYGAKLLTESLL 149
             SI A   + +  +  LD+LVNNAG++F           AE  ++TNF+G + +   LL
Sbjct: 65  LQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELL 124

Query: 150 PLFRRSPSKSRILNISSRLGTLS-KVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGT 208
           PL +      R++N+SS +   + K  +P ++     E ++EE++   +  F++  K G 
Sbjct: 125 PLIKPQ---GRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKGV 181

Query: 209 WKSQGWPEIWTDYAVSKLALNAYTMVLAK----RYEGEGISVNSYCPGFTQTSMTQGQGS 264
            + +GWP   + Y V+K+ +   + + A+    + +G+ I +N+ CPG+ +T M   + +
Sbjct: 182 HQKEGWP--SSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPKAT 239

Query: 265 HTADEAADVGARLLLLHPQ-QLPTAKFY 291
            + +E A+    L LL P  + P  +F 
Sbjct: 240 KSPEEGAETPVYLALLPPDAEGPHGQFV 267

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  150 bits (380), Expect = 1e-44
 Identities = 54/258 (20%), Positives = 95/258 (36%), Gaps = 46/258 (17%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVN--FFQLDVS 89
           +A+VTGA+ GIG A+ + L + GL V+  AR V   +         G P     ++ D+S
Sbjct: 12  LALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLS 71

Query: 90  DPSSIEAFVSWFKSNFAALDILVNNAGVS-FNDIYKNTVEHAETVIRTNFYGAKLLTESL 148
           +   I +  S  +S  + +DI +NNAG++  + +   +    + +   N     + T   
Sbjct: 72  NEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREA 131

Query: 149 LPLFR-RSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDG 207
               + R+     I+NI+S  G                         R + L +      
Sbjct: 132 YQSMKERNVDDGHIININSMSG------------------------HRVLPLSVTHF--- 164

Query: 208 TWKSQGWPEIWTDYAVSKLALNAYTMVLAK--RYEGEGISVNSYCPGFTQTSMTQGQGSH 265
                        Y+ +K A+ A T  L +  R     I      PG  +T         
Sbjct: 165 -------------YSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDK 211

Query: 266 TADEAADVGARLLLLHPQ 283
             ++AA    ++  L P+
Sbjct: 212 DPEKAAATYEQMKCLKPE 229

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  142 bits (358), Expect = 1e-41
 Identities = 61/266 (22%), Positives = 104/266 (39%), Gaps = 35/266 (13%)

Query: 32  IAIVTGANKGIGFALVKRLAELG--LTVILTARDVERGQRAVESLSEKGLPVNFFQLDVS 89
             +VTGAN+GIG  LV++L +      +I TARDVE+          K   V+   L V+
Sbjct: 5   SVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKS---IKDSRVHVLPLTVT 61

Query: 90  DPSSIEAFVSWFKSNFAA--LDILVNNAGV--SFNDIYKNTVEHAETVIRTNFYGAKLLT 145
              S++ FVS       +  L +L+NNAGV  S+    +         +  N     LLT
Sbjct: 62  CDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLT 121

Query: 146 ESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVK 205
           + LLPL + + SK                 + +  S+     ++       +        
Sbjct: 122 QKLLPLLKNAASK----------------ESGDQLSVSRAAVITISSGLGSITD------ 159

Query: 206 DGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSH 265
                S         Y +SK A+N +   LA   + + + V ++CPG+ QT++     + 
Sbjct: 160 ---NTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGKNAAL 216

Query: 266 TADEAADVGARLLLLHPQQLPTAKFY 291
           T +++                  +F+
Sbjct: 217 TVEQSTA-ELISSFNKLDNSHNGRFF 241

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  137 bits (346), Expect = 7e-40
 Identities = 48/257 (18%), Positives = 80/257 (31%), Gaps = 52/257 (20%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           I ++TGA  GIG       A+L   ++L   +    +         G  V+ F +D S+ 
Sbjct: 9   IVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNR 68

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVS-FNDIYKNTVEHAETVIRTNFYGAKLLTESLLP 150
             I +     K+    + ILVNNAGV   +D++       E     N       T++ LP
Sbjct: 69  EDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLP 128

Query: 151 LFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWK 210
              ++ +   I+ ++S  G    V  P                                 
Sbjct: 129 AMTKN-NHGHIVTVASAAG---HVSVPF-------------------------------- 152

Query: 211 SQGWPEIWTDYAVSKLALNAYTMVLAK---RYEGEGISVNSYCPGFTQTSMTQGQGSH-- 265
                     Y  SK A   +   L       +  G+     CP F  T   +   +   
Sbjct: 153 -------LLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNPSTSLG 205

Query: 266 ---TADEAADVGARLLL 279
                +E  +     +L
Sbjct: 206 PTLEPEEVVNRLMHGIL 222

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score =  137 bits (347), Expect = 9e-40
 Identities = 63/261 (24%), Positives = 95/261 (36%), Gaps = 53/261 (20%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLP---VNFFQLDV 88
           +AI+TG++ GIG A     A  G  V +T R  ER +   + +   G+    VN    DV
Sbjct: 7   VAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADV 66

Query: 89  SDPSSIEAFVSWFKSNFAALDILVNNAGVSFND-----IYKNTVEHAETVIRTNFYGAKL 143
           +  +  +  +S     F  LDILVNNAG +  D         ++E  +  +  N      
Sbjct: 67  TTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIA 126

Query: 144 LTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQS 203
           LT+  +P      +K  I+NISS    L                                
Sbjct: 127 LTKKAVPHLS--STKGEIVNISSIASGL-------------------------------- 152

Query: 204 VKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ--G 261
                      P+ +  Y+++K A++ YT   A      GI VNS  PG   T      G
Sbjct: 153 --------HATPD-FPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMG 203

Query: 262 QGSHTADEAADVGARLLLLHP 282
               T+ +     A +    P
Sbjct: 204 MPEETSKKFYSTMATMKECVP 224

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  131 bits (332), Expect = 1e-37
 Identities = 52/249 (20%), Positives = 84/249 (33%), Gaps = 50/249 (20%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           + +VTG  +GIG  +V+     G  V++  +D   G+   + L        F   DV+  
Sbjct: 8   VVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPG----AVFILCDVTQE 63

Query: 92  SSIEAFVSWFKSNFAALDILVNNA--GVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLL 149
             ++  VS     F  LD +VNNA          + + +    ++  N  G   LT+  L
Sbjct: 64  DDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLAL 123

Query: 150 PLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTW 209
           P  R+  S+  ++NISS                                           
Sbjct: 124 PYLRK--SQGNVINISS------------------------------------------L 139

Query: 210 KSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTADE 269
                      Y  +K A+ A T  LA      G+ VN   PG   T + +   +   D 
Sbjct: 140 VGAIGQAQAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDP 199

Query: 270 AADVGARLL 278
            A +   +L
Sbjct: 200 RASIREGML 208

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score =  130 bits (329), Expect = 3e-37
 Identities = 49/241 (20%), Positives = 72/241 (29%), Gaps = 50/241 (20%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
             +VTG  +GIG A+ +  A  G  V L     E  + A      + +   FFQ+D+ D 
Sbjct: 7   GVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVA------EAIGGAFFQVDLEDE 60

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVS-FNDIYKNTVEHAETVIRTNFYGAKLLTESLLP 150
                FV         +D+LVNNA ++         +     V+  N      L+     
Sbjct: 61  RERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAR 120

Query: 151 LFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWK 210
             R+      I+N++S  G                                         
Sbjct: 121 EMRKV-GGGAIVNVASVQGL---------------------------------------- 139

Query: 211 SQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTADEA 270
                E    Y  SK  L   T  LA       I VN+  PG   T       + + D  
Sbjct: 140 -FAEQE-NAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPE 197

Query: 271 A 271
            
Sbjct: 198 R 198

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score =  128 bits (324), Expect = 2e-36
 Identities = 48/243 (19%), Positives = 83/243 (34%), Gaps = 50/243 (20%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           +A+VTG   G+G  +VK L   G  V  +  +   GQ+    L E+ +   F + DVS  
Sbjct: 8   VALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSM---FVRHDVSSE 64

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVS-FNDIYKNTVEHAETVIRTNFYGAKLLTESLLP 150
           +     ++  +     L++LVNNAG+    D+    +E    +++ N     +  +  + 
Sbjct: 65  ADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIA 124

Query: 151 LFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWK 210
             +   +   I+N++S                                            
Sbjct: 125 AMKE--TGGSIINMASVSSW---------------------------------------- 142

Query: 211 SQGWPEIWTDYAVSKLALNAYTMVLAKRYE--GEGISVNSYCPGFTQTSMTQGQGSHTAD 268
                +    Y+ SK A++A T   A      G  I VNS  P    T M Q        
Sbjct: 143 -LPIEQYAG-YSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVS 200

Query: 269 EAA 271
           +  
Sbjct: 201 KEM 203

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

 Score =  127 bits (321), Expect = 4e-36
 Identities = 53/241 (21%), Positives = 83/241 (34%), Gaps = 46/241 (19%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           +A++TG   GIG A+ +R A  G  + +          A  ++   G  V   + DVS P
Sbjct: 7   LAVITGGANGIGRAIAERFAVEGADIAIADLVPA--PEAEAAIRNLGRRVLTVKCDVSQP 64

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVS-FNDIYKNTVEHAETVIRTNFYGAKLLTESLLP 150
             +EAF     S F   DILVNNAG+       + T E  +     N     L+ ++ +P
Sbjct: 65  GDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVP 124

Query: 151 LFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWK 210
             +R+     I   S                                             
Sbjct: 125 GMKRNGWGRIINLTS-------------------------------------------TT 141

Query: 211 SQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTADEA 270
                E +T Y  +K A   +T  LA     +GI+VN+  P   +T+ T+        + 
Sbjct: 142 YWLKIEAYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDV 201

Query: 271 A 271
            
Sbjct: 202 L 202

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

 Score =  127 bits (321), Expect = 5e-36
 Identities = 56/259 (21%), Positives = 82/259 (31%), Gaps = 55/259 (21%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLS-EKGLPVNFFQLDVSD 90
             I   A  GIG    + L +  L   +    VE      E  +    + + F   DV+ 
Sbjct: 7   NVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTV 66

Query: 91  P-SSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLL 149
           P +  +  +         +DIL+N AG+             E  I  NF G    T ++L
Sbjct: 67  PVAESKKLLKKIFDQLKTVDILINGAGI-------LDDHQIERTIAINFTGLVNTTTAIL 119

Query: 150 PLF--RRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDG 207
             +  R+      I NI S  G                                      
Sbjct: 120 DFWDKRKGGPGGIIANICSVTGF------------------------------------- 142

Query: 208 TWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTA 267
                   +    Y+ SK A+ ++T  LAK     G++  S  PG T+T +     S   
Sbjct: 143 ----NAIHQ-VPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLD 197

Query: 268 DEAADVGARLLLLHPQQLP 286
            E     A LLL HP Q  
Sbjct: 198 VEPR--VAELLLSHPTQTS 214

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

 Score =  127 bits (321), Expect = 5e-36
 Identities = 53/242 (21%), Positives = 89/242 (36%), Gaps = 45/242 (18%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
            A+VTG ++GIG+ +V+ LA LG +V   +R+ +     +     KG  V     D+S  
Sbjct: 10  TALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSR 69

Query: 92  SSIEAFVSWFKSNF-AALDILVNNAGVS-FNDIYKNTVEHAETVIRTNFYGAKLLTESLL 149
           S  +  ++   ++F   L+ILVNNAG+  + +    TVE    ++  NF  A  L+    
Sbjct: 70  SERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAH 129

Query: 150 PLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTW 209
           P  + S   + +   S                                            
Sbjct: 130 PFLKASERGNVVFISS------------------------------------------VS 147

Query: 210 KSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTADE 269
            +   P      A +K A++  T  LA  +  + I VN   PG   TS+ +        +
Sbjct: 148 GALAVPYEAVYGA-TKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQK 206

Query: 270 AA 271
             
Sbjct: 207 EN 208

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

 Score =  126 bits (318), Expect = 1e-35
 Identities = 53/251 (21%), Positives = 88/251 (35%), Gaps = 48/251 (19%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           +AI+TG   GIG A+  +  E G  V++T R  + G++A +S+      + FFQ D SD 
Sbjct: 8   VAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPD-QIQFFQHDSSDE 66

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVS-FNDIYKNTVEHAETVIRTNFYGAKLLTESLLP 150
                     +  F  +  LVNNAG++    + + T      ++  N  G    T   + 
Sbjct: 67  DGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQ 126

Query: 151 LFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWK 210
             +     + I+N+SS  G                                         
Sbjct: 127 RMKNKGLGASIINMSSIEGF---------------------------------------- 146

Query: 211 SQGWPEIWTDYAVSKLALNAYTMVLAKRYE--GEGISVNSYCPGFTQTSMTQGQGSHTAD 268
             G P     Y  SK A+   +   A         + VN+  PG+ +T +        A+
Sbjct: 147 -VGDPS-LGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPG--AE 202

Query: 269 EAADVGARLLL 279
           EA     +  +
Sbjct: 203 EAMSQRTKTPM 213

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  127 bits (319), Expect = 2e-35
 Identities = 55/267 (20%), Positives = 94/267 (35%), Gaps = 53/267 (19%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLP---VNFFQLDV 88
             I+TG++ GIG       A+ G  V +T R  ER +   + + + G+    VN    DV
Sbjct: 7   TVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADV 66

Query: 89  SDPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKN-----TVEHAETVIRTNFYGAKL 143
           +     +  ++     F  +D+LVNNAG +  D +        ++     ++ N      
Sbjct: 67  TTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIE 126

Query: 144 LTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQS 203
           +T+ + P    S  +   ++                                        
Sbjct: 127 MTKKVKPHLVASKGEIVNVSSI-------------------------------------- 148

Query: 204 VKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQG 263
                   Q  P+ +  YA++K AL+ YT   A      GI VNS  PG  +T  T   G
Sbjct: 149 ----VAGPQAQPD-FLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMG 203

Query: 264 SHTADEAADVGARLLLLHPQQLPTAKF 290
               D+A+      +  H + +P    
Sbjct: 204 --MPDQASQKFYNFMASHKECIPIGAA 228

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

 Score =  127 bits (319), Expect = 2e-35
 Identities = 43/248 (17%), Positives = 76/248 (30%), Gaps = 46/248 (18%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           +AI+TG   GIG    K     G  V++     + GQ+   ++    + ++F   DV+  
Sbjct: 8   VAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDV-ISFVHCDVTKD 66

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSFN---DIYKNTVEHAETVIRTNFYGAKLLTESL 148
             +   V    +    LDI+  N GV       I +   E  + V+  N YGA L+ +  
Sbjct: 67  EDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHA 126

Query: 149 LPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGT 208
             +   +  K  I+  +S                                          
Sbjct: 127 ARVMIPA-KKGSIVFTASISS--------------------------------------- 146

Query: 209 WKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTAD 268
                   +   Y  +K A+   T  L       GI VN   P    + +        + 
Sbjct: 147 --FTAGEGVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSS 204

Query: 269 EAADVGAR 276
              ++  +
Sbjct: 205 RVEELAHQ 212

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

 Score =  126 bits (317), Expect = 2e-35
 Identities = 50/242 (20%), Positives = 84/242 (34%), Gaps = 47/242 (19%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
             I+TG  +G+G    ++    G  V+L     E G      L +      +  LDV+  
Sbjct: 7   TVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDA---ARYQHLDVTIE 63

Query: 92  SSIEAFVSWFKSNFAALDILVNNAG-VSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLP 150
              +  V++ +  F ++D LVNNAG  +   +   +VE    V+  N  G  +  ++++P
Sbjct: 64  EDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIP 123

Query: 151 LFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWK 210
             + +     I+NISS  G                                         
Sbjct: 124 AMKDAGG-GSIVNISSAAG----------------------------------------- 141

Query: 211 SQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTADEA 270
                 + + Y  SK  +   + + A     + I VNS  PG T T MT   G    +  
Sbjct: 142 -LMGLALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQGEGN 200

Query: 271 AD 272
             
Sbjct: 201 YP 202

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

 Score =  125 bits (316), Expect = 3e-35
 Identities = 53/243 (21%), Positives = 80/243 (32%), Gaps = 37/243 (15%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESL-SEKGLPVNFFQLDVSD 90
             IVTG N+GIG A  + +A  G  V +  R         E +  E G+    +Q DVS+
Sbjct: 11  TIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSN 70

Query: 91  PSSIEAFVSWFKSNFAALDILVNNAGVS-FNDIYKNTVEHAETVIRTNFYGAKLLTESLL 149
              +   +    ++   +  L+ NAGVS      + T E    V   N +G      ++ 
Sbjct: 71  TDIVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVA 130

Query: 150 PLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTW 209
            L+ +   K  I+  SS    +    + N                               
Sbjct: 131 KLWLQKQQKGSIVVTSSMSSQIINQSSLN------------------------------- 159

Query: 210 KSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTADE 269
                      Y  SK A +     LA  +   GI VN+  PG+  T  T        D 
Sbjct: 160 ----GSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDKKIRDH 215

Query: 270 AAD 272
            A 
Sbjct: 216 QAS 218

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  125 bits (316), Expect = 4e-35
 Identities = 51/241 (21%), Positives = 75/241 (31%), Gaps = 45/241 (18%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
             +VTG  KGIG A+V+  A  G  +   AR+       +    +KG  V     D S  
Sbjct: 10  TVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLR 69

Query: 92  SSIEAFVSWFKSNFA-ALDILVNNAGVS-FNDIYKNTVEHAETVIRTNFYGAKLLTESLL 149
              E  +    S F   LDIL+NN G          T E     I TN   A  L++   
Sbjct: 70  PEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAH 129

Query: 150 PLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTW 209
           PL + S   + I                                              + 
Sbjct: 130 PLLKASGCGNII-------------------------------------------FMSSI 146

Query: 210 KSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTADE 269
                  + + Y+ +K ALN     LA  +  +GI  N+  P    T + +        +
Sbjct: 147 AGVVSASVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDEFKK 206

Query: 270 A 270
            
Sbjct: 207 V 207

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  125 bits (314), Expect = 6e-35
 Identities = 59/258 (22%), Positives = 93/258 (36%), Gaps = 56/258 (21%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVN--FFQLDVS 89
           +A+VTGA +GIG A  + L   G  V L   ++E G +   +L E+  P    F Q DV+
Sbjct: 5   VALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVA 64

Query: 90  DPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLL 149
           D   +         +F  LDILVNNAGV       N  ++ E  ++ N       T   L
Sbjct: 65  DQQQLRDTFRKVVDHFGRLDILVNNAGV-------NNEKNWEKTLQINLVSVISGTYLGL 117

Query: 150 PLFRRSPSK--SRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDG 207
               +        I+N+SS  G                           + +  Q V   
Sbjct: 118 DYMSKQNGGEGGIIINMSSLAG--------------------------LMPVAQQPV--- 148

Query: 208 TWKSQGWPEIWTDYAVSKLALNAYT--MVLAKRYEGEGISVNSYCPGFTQTSMTQG-QGS 264
                        Y  SK  +  +T    LA      G+ +N+ CPGF  T++ +  +  
Sbjct: 149 -------------YCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKE 195

Query: 265 HTADEAADVGARLLLLHP 282
               +  +    +  +  
Sbjct: 196 ENMGQYIEYKDHIKDMIK 213

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  125 bits (314), Expect = 8e-35
 Identities = 52/259 (20%), Positives = 89/259 (34%), Gaps = 51/259 (19%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLP---VNFFQLDV 88
             I+TG++ GIG +     A+ G  V +T R+ +R +   + + + G+P   +N    DV
Sbjct: 6   SVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADV 65

Query: 89  SDPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKN---TVEHAETVIRTNFYGAKLLT 145
           ++ S  +  ++   + F  +DILVNNAG +  D   N    VE  +   + NF     +T
Sbjct: 66  TEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMT 125

Query: 146 ESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVK 205
           +       ++  +   ++                                          
Sbjct: 126 QKTKEHLIKTKGEIVNVSSI---------------------------------------- 145

Query: 206 DGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSH 265
                       +  YA +K AL+ YT   A      G+ VNS  PG   T      G  
Sbjct: 146 ---VAGPQAHSGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLP 202

Query: 266 --TADEAADVGARLLLLHP 282
              +D+            P
Sbjct: 203 ETASDKLYSFIGSRKECIP 221

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score =  123 bits (309), Expect = 3e-34
 Identities = 59/242 (24%), Positives = 98/242 (40%), Gaps = 44/242 (18%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEK-GLPVNFFQLDVSD 90
           +A+VTG ++G+GF + + LAE G +V++ +R++E    A + L+EK G+    F+ DVS+
Sbjct: 7   VALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSN 66

Query: 91  PSSIEAFVSWFKSNFAALDILVNNAGVS-FNDIYKNTVEHAETVIRTNFYGAKLLTESLL 149
              ++  +   K  F  LD +VN AG++  +   +  ++    VI  N +G   +     
Sbjct: 67  YEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAF 126

Query: 150 PLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTW 209
            L R S + S I   S                                            
Sbjct: 127 SLLRESDNPSIINIGSL------------------------------------------T 144

Query: 210 KSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTADE 269
             +      + YA SK  + + T  LAK +   GI VN   PG+ +T MT+   S     
Sbjct: 145 VEEVTMPNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKL 204

Query: 270 AA 271
             
Sbjct: 205 DY 206

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

 Score =  122 bits (308), Expect = 5e-34
 Identities = 56/238 (23%), Positives = 87/238 (36%), Gaps = 42/238 (17%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           +A+VTGA  GIG  + +RL + GL V + AR  E  +  ++ L E G+  +    DV   
Sbjct: 4   VALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSV 63

Query: 92  SSIEAFVSWFKSNFAALDILVNNAG-VSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLP 150
             IEA V+     +  +D+LVNNAG        +   E    V+ TN  G   +T+ +L 
Sbjct: 64  PEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLK 123

Query: 151 LFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWK 210
                   +  +   +                                            
Sbjct: 124 AGGMLERGTGRIVNIAS-----------------------------------------TG 142

Query: 211 SQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTAD 268
            +        Y+ SK  +  +T  L       GI+VN+ CPGF +T M      H +D
Sbjct: 143 GKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSD 200

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  120 bits (301), Expect = 3e-33
 Identities = 48/249 (19%), Positives = 76/249 (30%), Gaps = 52/249 (20%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
            A+VTGA KGIG   VK L   G  V+   R         +        +    +D+ D 
Sbjct: 7   RALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPG----IEPVCVDLGDW 62

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVS-FNDIYKNTVEHAETVIRTNFYGAKLLTESLLP 150
            + E  +         +D+LVNNA +       + T E  +     N      +++ +  
Sbjct: 63  DATEKALGGIGP----VDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVAR 118

Query: 151 LFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWK 210
                     I+N+SS                                            
Sbjct: 119 DMINRGVPGSIVNVSS-----------------------------------------MVA 137

Query: 211 SQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTADEA 270
              +P     Y+ +K A+   T  +A       I VNS  P    T M + + S   + A
Sbjct: 138 HVTFPN-LITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGK-KVSADPEFA 195

Query: 271 ADVGARLLL 279
             +  R  L
Sbjct: 196 RKLKERHPL 204

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score =  119 bits (300), Expect = 6e-33
 Identities = 41/239 (17%), Positives = 76/239 (31%), Gaps = 43/239 (17%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
            AI+TGA  GIG  +    A  G +V+++  + +     V+ + + G      + D++  
Sbjct: 13  CAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSE 72

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPL 151
             + A   +  S    +DILVNNAG      +   +         N +    L++ + P 
Sbjct: 73  QELSALADFAISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPE 132

Query: 152 FRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKS 211
             ++     +   S                                             +
Sbjct: 133 MEKNGGGVILTITS-------------------------------------------MAA 149

Query: 212 QGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTADEA 270
           +      T YA SK A +     +A     + I VN   PG   T   +   +   ++ 
Sbjct: 150 ENKNINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQK 208

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  118 bits (297), Expect = 1e-32
 Identities = 48/234 (20%), Positives = 74/234 (31%), Gaps = 51/234 (21%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
             +VTGA KGIG   V+ L   G  V+  +R        V         +    +D+ D 
Sbjct: 9   RVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPG----IEPVCVDLGDW 64

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVS-FNDIYKNTVEHAETVIRTNFYGAKLLTESLLP 150
            + E  +         +D+LVNNA V+      + T E  +     N      +++ +  
Sbjct: 65  EATERALGSVGP----VDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVAR 120

Query: 151 LFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWK 210
                     I+N+S                                          +  
Sbjct: 121 GLIARGVPGAIVNVS------------------------------------------SQC 138

Query: 211 SQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGS 264
           SQ      + Y  +K AL+  T V+A       I VN+  P    TSM Q   S
Sbjct: 139 SQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWS 192

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

 Score =  114 bits (286), Expect = 5e-31
 Identities = 54/242 (22%), Positives = 93/242 (38%), Gaps = 50/242 (20%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
             ++TGA  GIG A ++  A+ G  ++    +    + A E++       +   +DV+DP
Sbjct: 7   AVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVG-----AHPVVMDVADP 61

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVS-FNDIYKNTVEHAETVIRTNFYGAKLLTESLLP 150
           +S+E   +   ++   LD +V+ AG++  N  +K  +E  E V+R N  G+ L+ ++   
Sbjct: 62  ASVERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASE 121

Query: 151 LFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWK 210
             R     S +L  S                              ++G   Q+       
Sbjct: 122 AMREKNPGSIVLTASR----------------------------VYLGNLGQAN------ 147

Query: 211 SQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTADEA 270
                     YA S   +   T  LA      GI VN+  PGF +T MT        ++A
Sbjct: 148 ----------YAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVPEKVREKA 197

Query: 271 AD 272
             
Sbjct: 198 IA 199

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} Length = 240

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

 Score =  114 bits (285), Expect = 7e-31
 Identities = 46/262 (17%), Positives = 79/262 (30%), Gaps = 57/262 (21%)

Query: 32  IAIVTGANKGIGFALVKRLAELG-------LTVILTARDVERGQRAVESLSEKGLPVNFF 84
           I ++TGA KGIG A+    A            ++L++R     ++       +G   +  
Sbjct: 3   ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTI 62

Query: 85  QLDVSDPSSIEAFVSWFKSNFAALDILVNNA-GVSFNDIYKNTVEHAETVIRTNFYGAKL 143
             D+SD + +    +     +  +D LVNNA    F  +   T E  +  + TN  G   
Sbjct: 63  TADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFF 122

Query: 144 LTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQS 203
           LT++L  L  R  S      I+S   T                                 
Sbjct: 123 LTQALFALMERQHSGHIF-FITSVAAT--------------------------------- 148

Query: 204 VKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQG 263
                   + +    + Y +SK         +        + +    PG   T M     
Sbjct: 149 --------KAFRH-SSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVD 199

Query: 264 SH------TADEAADVGARLLL 279
                     ++ A    +  L
Sbjct: 200 DEMQALMMMPEDIAAPVVQAYL 221

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score =  113 bits (283), Expect = 2e-30
 Identities = 52/242 (21%), Positives = 85/242 (35%), Gaps = 46/242 (19%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTA-RDVERGQRAVESLSEKGLPVNFFQLDVSD 90
           +A+ TGA +GIG  +   L   G +V++      +  +  V  L + G      Q D+S 
Sbjct: 8   VALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISK 67

Query: 91  PSSIEAFVSWFKSNFAALDILVNNAGVS-FNDIYKNTVEHAETVIRTNFYGAKLLTESLL 149
           PS + A      S+F  LD +++N+G+  + D  + T E  + V   N  G   + +  L
Sbjct: 68  PSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGL 127

Query: 150 PLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTW 209
              RR        +I++ +                                         
Sbjct: 128 KHCRRGGRIILTSSIAAVMT---------------------------------------- 147

Query: 210 KSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTADE 269
              G P     YA SK A+  +    A     +G++VN   PG  +T M      H A  
Sbjct: 148 ---GIPN-HALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPG 203

Query: 270 AA 271
             
Sbjct: 204 GY 205

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

 Score =  112 bits (282), Expect = 2e-30
 Identities = 32/255 (12%), Positives = 64/255 (25%), Gaps = 52/255 (20%)

Query: 31  TIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSD 90
           + AIVT      G     RL+E G TV       ++          +     + QL    
Sbjct: 1   STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDEL------EAFAETYPQLKPMS 54

Query: 91  PSSIEAFVSWFKSNFAALDILVNNAGVS--FNDIYKNTVEHAETVIRTNFYGAKLLTESL 148
                  +    S +  +D+LV+N   +  F  I K  VE     +         L  ++
Sbjct: 55  EQEPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAV 114

Query: 149 LPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGT 208
               ++                                                 +   +
Sbjct: 115 ASQMKKRK-------------------------------------------SGHIIFITS 131

Query: 209 WKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG-QGSHTA 267
               G  +  + Y  ++         L+K      I V +  P +  +  +     +   
Sbjct: 132 ATPFGPWKELSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPW 191

Query: 268 DEAADVGARLLLLHP 282
               +  A +  +  
Sbjct: 192 KTNPEHVAHVKKVTA 206

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  112 bits (280), Expect = 4e-30
 Identities = 47/231 (20%), Positives = 80/231 (34%), Gaps = 47/231 (20%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           +A+V+G  +G+G + V+ +   G  V+      E G+     L++      +  LDV+ P
Sbjct: 8   VALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAAR---YVHLDVTQP 64

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGV-SFNDIYKNTVEHAETVIRTNFYGAKLLTESLLP 150
           +  +A V    + F  L +LVNNAG+ +   I    +   + ++  N  G  L   +++ 
Sbjct: 65  AQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVK 124

Query: 151 LFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWK 210
             + +   S I   S                                            +
Sbjct: 125 PMKEAGRGSIINISS-------------------------------------------IE 141

Query: 211 SQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG 261
                     Y  +K A+   T   A      GI VNS  PG  +T MT  
Sbjct: 142 GLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDW 192

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  112 bits (282), Expect = 5e-30
 Identities = 49/247 (19%), Positives = 82/247 (33%), Gaps = 50/247 (20%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSE-----KGLPVNFFQL 86
           +AIVTG   GIG A+VK L ELG  V++ +R +ER + A + L       K   V   Q 
Sbjct: 14  VAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQC 73

Query: 87  DVSDPSSIEAFVSWFKSNFAALDILVNNAGVSF-NDIYKNTVEHAETVIRTNFYGAKLLT 145
           ++ +   +   V      F  ++ LVNN G  F +     + +    V+ TN  G   + 
Sbjct: 74  NIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMC 133

Query: 146 ESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVK 205
           +++   + +    S +  I                                         
Sbjct: 134 KAVYSSWMKEHGGSIVNIIVPTKA------------------------------------ 157

Query: 206 DGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSH 265
                  G+P      A ++  +   T  LA  +   GI +N   PG   +         
Sbjct: 158 -------GFPLAVHSGA-ARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGS 209

Query: 266 TADEAAD 272
                 +
Sbjct: 210 WGQSFFE 216

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  112 bits (282), Expect = 7e-30
 Identities = 43/254 (16%), Positives = 77/254 (30%), Gaps = 55/254 (21%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVE-----RGQRAVESLSEK-GLPVNFFQ 85
           + +VTGA  G+G A     AE G  V++     +     +G  A + + E+         
Sbjct: 9   VVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAV 68

Query: 86  LDVSDPSSIEAFVSWFKSNFAALDILVNNAGVS-FNDIYKNTVEHAETVIRTNFYGAKLL 144
            +     + E  V      F  +D++VNNAG+       + + E  + + R +  G+  +
Sbjct: 69  ANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQV 128

Query: 145 TESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSV 204
           T +     ++     RI+  +S  G                            G F Q+ 
Sbjct: 129 TRAAWDHMKKQNY-GRIIMTASASG--------------------------IYGNFGQAN 161

Query: 205 KDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGS 264
                           Y+ +KL L      L        I  N+  P             
Sbjct: 162 ----------------YSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTETVMPE 205

Query: 265 H-----TADEAADV 273
                   +  A +
Sbjct: 206 DLVEALKPEYVAPL 219

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

 Score =  111 bits (277), Expect = 1e-29
 Identities = 51/260 (19%), Positives = 91/260 (35%), Gaps = 43/260 (16%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           +A+VTGA +GIG A+  RL + G  V +   +    +     +++ G      ++DVSD 
Sbjct: 3   VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDR 62

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETV-IRTNFYGAKLLTESLLP 150
             + A V   +      D++VNNAGV+ +   ++            N  G     ++ + 
Sbjct: 63  DQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVE 122

Query: 151 LFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWK 210
            F++     +I+N  S+ G                                         
Sbjct: 123 AFKKEGHGGKIINACSQAG----------------------------------------- 141

Query: 211 SQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTADEA 270
                     Y+ SK A+   T   A+     GI+VN YCPG  +T M        ++ A
Sbjct: 142 -HVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAA 200

Query: 271 ADVGARLLLLHPQQLPTAKF 290
                       +++   + 
Sbjct: 201 GKPLGYGTAEFAKRITLGRL 220

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  111 bits (277), Expect = 2e-29
 Identities = 52/253 (20%), Positives = 82/253 (32%), Gaps = 56/253 (22%)

Query: 32  IAIVTGANKGIGFALVKRLAEL---GLTVILTARDVERGQRAVESLSEK--GLPVNFFQL 86
           + ++TGA++G G AL  +LA L   G  ++++AR     ++  E L  +   L V     
Sbjct: 8   VCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAA 67

Query: 87  DVSDPSSIEAFVSWFKSN----FAALDILVNNA----GVSFNDIYKNTVEHAETVIRTNF 138
           D+   + ++  +S  +           +L+NNA     VS   +  N +         N 
Sbjct: 68  DLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNL 127

Query: 139 YGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVG 198
                LT   L  F+ SP  S+ +   S                                
Sbjct: 128 TSMLCLTSGTLNAFQDSPGLSKTVVNISS------------------------------- 156

Query: 199 LFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSM 258
                        Q +   W  Y   K A +    VLA   E   + V SY PG     M
Sbjct: 157 ---------LCALQPYK-GWGLYCAGKAARDMLYQVLAA--EEPSVRVLSYAPGPLDNDM 204

Query: 259 TQGQGSHTADEAA 271
            Q     + D   
Sbjct: 205 QQLARETSKDPEL 217

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score =  110 bits (276), Expect = 2e-29
 Identities = 51/241 (21%), Positives = 85/241 (35%), Gaps = 42/241 (17%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           +A+VTGA +GIG  + K LA+    VI  +R  +     V+ +   G   + +  DVS  
Sbjct: 12  VALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKK 71

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPL 151
             I   ++   +    +DILVNNAG++ ++++          +      +       +  
Sbjct: 72  EEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISK 131

Query: 152 FRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKS 211
              +    RI+NISS +G                                          
Sbjct: 132 RMINNRYGRIINISSIVGL----------------------------------------- 150

Query: 212 QGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTADEAA 271
            G      +Y+ SK  +  +T  LAK      I+VN+  PGF  + MT            
Sbjct: 151 TGNVG-QANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKISEQIKKNII 209

Query: 272 D 272
            
Sbjct: 210 S 210

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

 Score =  110 bits (276), Expect = 3e-29
 Identities = 40/247 (16%), Positives = 66/247 (26%), Gaps = 54/247 (21%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
             ++TG   G+G ALV R    G  V +  +  ER         +    V     DV   
Sbjct: 7   AVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDN---VLGIVGDVRSL 63

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVS------FNDIYKNTVEHAETVIRTNFYGAKLLT 145
              +   S   + F  +D L+ NAG+        +   ++     + V   N  G     
Sbjct: 64  EDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAV 123

Query: 146 ESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVK 205
           ++ LP      S+  ++   S  G      N                             
Sbjct: 124 KACLPALVA--SRGNVIFTISNAGFYP---NGG--------------------------- 151

Query: 206 DGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSH 265
                          Y  +K A+      LA       + VN    G   + +       
Sbjct: 152 ------------GPLYTAAKHAIVGLVRELAFEL-APYVRVNGVGSGGINSDLRGPSSLG 198

Query: 266 TADEAAD 272
              +A  
Sbjct: 199 MGSKAIS 205

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  109 bits (273), Expect = 7e-29
 Identities = 55/252 (21%), Positives = 92/252 (36%), Gaps = 55/252 (21%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLP-VNFFQLDVSD 90
             IVTGA+KGIG  +   LA++G  V++TAR  E  Q+ V    E G    ++    + D
Sbjct: 16  KVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMED 75

Query: 91  PSSIEAFVSWFKSNFAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLL 149
            +  E FV+        LD+L+ N   + + +++ + + H    +  NF    +LT + L
Sbjct: 76  MTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAAL 135

Query: 150 PLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTW 209
           P+ ++  S   I+ +SS  G                                        
Sbjct: 136 PMLKQ--SNGSIVVVSSLAGK--------------------------------------- 154

Query: 210 KSQGWPEIWTDYAVSKLALNAYTMVLAKRY--EGEGISVNSYCPGFTQTSMTQGQGS--- 264
               +P     Y+ SK AL+ +   + K Y      +S+     G   T       S   
Sbjct: 155 --VAYPM-VAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSGIV 211

Query: 265 ----HTADEAAD 272
                  +E A 
Sbjct: 212 HMQAAPKEECAL 223

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

 Score =  107 bits (269), Expect = 2e-28
 Identities = 52/250 (20%), Positives = 96/250 (38%), Gaps = 45/250 (18%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVE-RGQRAVESLSEKGLPVNFFQLDVSD 90
           + ++TG++ G+G ++  R A     V++  R  E      +E + + G      + DV+ 
Sbjct: 9   VVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTV 68

Query: 91  PSSIEAFVSWFKSNFAALDILVNNAGVS-FNDIYKNTVEHAETVIRTNFYGAKLLTESLL 149
            S +   V      F  LD+++NNAG+      ++ ++     VI TN  GA L +   +
Sbjct: 69  ESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAI 128

Query: 150 PLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTW 209
             F  +  K  ++N+SS                                           
Sbjct: 129 KYFVENDIKGTVINMSS------------------------------------------V 146

Query: 210 KSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTADE 269
             +    ++  YA SK  +   T  LA  Y  +GI VN+  PG   T +   + +   ++
Sbjct: 147 HEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFA-DPEQ 205

Query: 270 AADVGARLLL 279
            ADV + + +
Sbjct: 206 RADVESMIPM 215

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

 Score =  106 bits (266), Expect = 3e-28
 Identities = 53/241 (21%), Positives = 78/241 (32%), Gaps = 48/241 (19%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
             +VTGA  GIG A +   A  G +++   R+      AV +L  + + V     DVSDP
Sbjct: 7   TILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAV---VADVSDP 63

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPL 151
            ++EA  +     F  L  + + AGV+ + +  N    A                     
Sbjct: 64  KAVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWE------------------- 104

Query: 152 FRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKS 211
                                KV   N+         + E +E    L L     G    
Sbjct: 105 ---------------------KVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLGAF 143

Query: 212 QGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTADEAA 271
                    YA  KL +      LA     +G+ VN   PG  QT MT G      ++  
Sbjct: 144 GLAH-----YAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLPPWAWEQEV 198

Query: 272 D 272
            
Sbjct: 199 G 199

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

 Score =  105 bits (263), Expect = 1e-27
 Identities = 46/255 (18%), Positives = 78/255 (30%), Gaps = 46/255 (18%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVN--FFQLDVS 89
           + ++TG   G+G A   RLA  G  + L     E  + +  ++ E            DVS
Sbjct: 6   VVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVS 65

Query: 90  DPSSIEAFVSWFKSNFAALDILVNNAGVSFND-IYKNTVEHAETVIRTNFYGAKLLTESL 148
           D + +EA+V+     F  +D   NNAG+       ++        + +       L    
Sbjct: 66  DEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEK 125

Query: 149 LPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGT 208
           +    R      ++N +S  G                                       
Sbjct: 126 VLKIMREQGSGMVVNTASVGGI-------------------------------------- 147

Query: 209 WKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTAD 268
              +G       YA +K  +   T   A  Y   GI +N+  PG   T M +        
Sbjct: 148 ---RGIGNQSG-YAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDP 203

Query: 269 E-AADVGARLLLLHP 282
           E         + ++P
Sbjct: 204 ENPRKAAEEFIQVNP 218

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

 Score =  105 bits (262), Expect = 2e-27
 Identities = 59/248 (23%), Positives = 94/248 (37%), Gaps = 45/248 (18%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
            A+VTG +KGIG+A+V+ LA LG  V   +R+ +     +E   EKGL V     D+   
Sbjct: 8   TALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSR 67

Query: 92  SSIEAFVSWFKSNFA-ALDILVNNA-GVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLL 149
           +  +  +      F   L+ILVNNA  V   +    T +    ++ TNF  A  L++   
Sbjct: 68  TERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAY 127

Query: 150 PLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTW 209
           PL + S     ++ +SS  G                                        
Sbjct: 128 PLLKASQ-NGNVIFLSSIAG---------------------------------------- 146

Query: 210 KSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTADE 269
                    + Y+ SK A+N  T  LA  +  + I VNS  PG   T + +        +
Sbjct: 147 --FSALPSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQ 204

Query: 270 AADVGARL 277
             ++   +
Sbjct: 205 KEEIDNFI 212

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score =  104 bits (260), Expect = 2e-27
 Identities = 52/267 (19%), Positives = 96/267 (35%), Gaps = 40/267 (14%)

Query: 33  AIVTGANKGIGFALVKRLAEL---GLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVS 89
            ++TG N+G+G  LVK L  L      +  T R+ E+ +  +E L++    ++  ++D+ 
Sbjct: 5   ILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAK-ELEDLAKNHSNIHILEIDLR 63

Query: 90  DPSSIEA--FVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAE--TVIRTNFYGAKLLT 145
           +  + +         +    L++L NNAG++        V   E    ++TN     +L 
Sbjct: 64  NFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLA 123

Query: 146 ESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVK 205
           ++ LPL +++   +    +             N+ SIL                      
Sbjct: 124 KACLPLLKKAAKANESQPMGVGRA-----AIINMSSIL---------------------- 156

Query: 206 DGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSH 265
            G+ +          Y  SK ALNA T  L+     + I   S  PG+ +T M       
Sbjct: 157 -GSIQGNTDGG-MYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGSSAPL 214

Query: 266 TADE-AADVGARLLLLHPQQLPTAKFY 291
                   +   +  L  +      F 
Sbjct: 215 DVPTSTGQIVQTISKLGEK--QNGGFV 239

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

 Score =  105 bits (262), Expect = 2e-27
 Identities = 57/256 (22%), Positives = 90/256 (35%), Gaps = 48/256 (18%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           + +VTGA   IG A   RLAE G  + L   + E  ++A  S+ EKG+    +  DV+  
Sbjct: 7   VCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSE 66

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVS--FNDIYKNTVEHAETVIRTNFYGAKLLTESLL 149
            ++   V     +F  +D L NNAG    F  +     +    V+  N  GA  + +++ 
Sbjct: 67  EAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVS 126

Query: 150 PLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTW 209
                     RI+N +S  G                                        
Sbjct: 127 RQMITQN-YGRIVNTASMAGV--------------------------------------- 146

Query: 210 KSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTADE 269
             +G P     Y  SK A+ A T   A       I VN+  PG+        +     + 
Sbjct: 147 --KGPP-NMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWER---QVEL 200

Query: 270 AADVGARLLLLHPQQL 285
            A VG++     P+ +
Sbjct: 201 QAKVGSQYFSTDPKVV 216

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

 Score =  104 bits (261), Expect = 5e-27
 Identities = 42/250 (16%), Positives = 86/250 (34%), Gaps = 44/250 (17%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEK-GLPVNFFQLDVSD 90
           +A +TG   G+G  +   L+ LG   ++ +R ++  +   E +S + G  V+  Q DV D
Sbjct: 27  VAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRD 86

Query: 91  PSSIEAFVSWFKSNFAALDILVNNA-GVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLL 149
           P  ++  VS         +I++NNA G   +   + +    +T+      G   +T  + 
Sbjct: 87  PDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIG 146

Query: 150 PLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTW 209
               ++   +  L+I++                                           
Sbjct: 147 KQLIKAQKGAAFLSITT------------------------------------------I 164

Query: 210 KSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTADE 269
            ++         A +K  + A +  LA  +   G+  N   PG  +T     +   T   
Sbjct: 165 YAETGSGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTF 224

Query: 270 AADVGARLLL 279
             ++  R+  
Sbjct: 225 EKEMIGRIPC 234

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score =  104 bits (260), Expect = 6e-27
 Identities = 46/232 (19%), Positives = 76/232 (32%), Gaps = 46/232 (19%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARD-VERGQRAVESLSEKGLPVNFFQLDVSD 90
           +A+VTGA +GIG  +   L   G  VI+   +  E  +  V ++ + G      + +V  
Sbjct: 20  VALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGV 79

Query: 91  PSSIEAFVSWFKSNFAALDILVNNAG-VSFNDIYKNTVEHAETVIRTNFYGAKLLTESLL 149
              I          F  LDI+ +N+G VSF  +   T E  + V   N  G   +     
Sbjct: 80  VEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVARE-- 137

Query: 150 PLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTW 209
             ++      R++ + S  G                                        
Sbjct: 138 -AYKHLEIGGRLILMGSITGQA-------------------------------------- 158

Query: 210 KSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG 261
                      Y+ SK A+  +   +A     + I+VN   PG  +T M   
Sbjct: 159 ---KAVPKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHA 207

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score =  102 bits (254), Expect = 2e-26
 Identities = 55/243 (22%), Positives = 97/243 (39%), Gaps = 45/243 (18%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILT-ARDVERGQRAVESLSEKGLPVNFFQLDVSD 90
           + +VTGA++GIG A+   L + G  V++  AR  +  +   + +   G     F  DVS 
Sbjct: 3   VVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSK 62

Query: 91  PSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHA-ETVIRTNFYGAKLLTESLL 149
            + +EA +      +  +D++VNNAG++ + +     +   + VI  N  G  L T++  
Sbjct: 63  EADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAAT 122

Query: 150 PLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTW 209
            +  +   K RI+NI+S +G                           +G   Q+      
Sbjct: 123 KIMMKK-RKGRIINIASVVG--------------------------LIGNIGQAN----- 150

Query: 210 KSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTADE 269
                      YA +K  +  ++   A+      I+VN  CPGF  + MT   G     +
Sbjct: 151 -----------YAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGEDMEKK 199

Query: 270 AAD 272
              
Sbjct: 200 ILG 202

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

 Score =  101 bits (251), Expect = 8e-26
 Identities = 53/243 (21%), Positives = 91/243 (37%), Gaps = 46/243 (18%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTAR-DVERGQRAVESLSEK-GLPVNFFQLDVS 89
           +A+VTG+  GIG  +   LA  G  ++L    D    ++    L+ + G+ V +   D+S
Sbjct: 6   VAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLS 65

Query: 90  DPSSIEAFVSWFKSNFAALDILVNNA-GVSFNDIYKNTVEHAETVIRTNFYGAKLLTESL 148
              ++   V         +DILVNNA       I     E  + ++  N       T + 
Sbjct: 66  KGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAA 125

Query: 149 LPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGT 208
           LP  ++     RI+NI+S  G +                                     
Sbjct: 126 LPHMKKQ-GFGRIINIASAHGLV------------------------------------- 147

Query: 209 WKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTAD 268
                     + Y  +K  +  +T V A    G+GI+ N+ CPG+ +T + + Q S  A+
Sbjct: 148 -----ASANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAE 202

Query: 269 EAA 271
           +  
Sbjct: 203 KNG 205

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

 Score = 98.7 bits (245), Expect = 6e-25
 Identities = 45/241 (18%), Positives = 82/241 (34%), Gaps = 46/241 (19%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
            A++TG+ +GIG A  +     G  V +   ++E  +     +      +    LDV+D 
Sbjct: 7   TALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAI---ALDVTDQ 63

Query: 92  SSIEAFVSWFKSNFAALDILV-NNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLP 150
           +SI+  V+     + ++DILV N A      I + T E  + +   N  G   + +++  
Sbjct: 64  ASIDRCVAELLDRWGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVAR 123

Query: 151 LFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWK 210
                    +I+N++S+ G                                         
Sbjct: 124 AMIAGGRGGKIINMASQAGRRG-------------------------------------- 145

Query: 211 SQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTADEA 270
                 +   Y  +K A+ + T          GI+VN+  PG        G  +  AD  
Sbjct: 146 ----EALVGVYCATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEHWDGVDAKFADYE 201

Query: 271 A 271
            
Sbjct: 202 N 202

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

 Score = 97.9 bits (243), Expect = 8e-25
 Identities = 63/242 (26%), Positives = 99/242 (40%), Gaps = 47/242 (19%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           IA+VTGA++GIG A+ + LA  G  VI TA      Q   + L   G       L+V+DP
Sbjct: 6   IALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANG---KGLMLNVTDP 62

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETV-IRTNFYGAKLLTESLLP 150
           +SIE+ +   ++ F  +DILVNNAG++ +++     +      I TN      L+++++ 
Sbjct: 63  ASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMR 122

Query: 151 LFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWK 210
              +     RI+ I S +GT                                        
Sbjct: 123 AMMKKRH-GRIITIGSVVGT---------------------------------------- 141

Query: 211 SQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTADEA 270
             G      +YA +K  L  ++  LA+     GI+VN   PGF +T MT+          
Sbjct: 142 -MGNGG-QANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRALSDDQRAGI 199

Query: 271 AD 272
             
Sbjct: 200 LA 201

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 97.3 bits (241), Expect = 3e-24
 Identities = 46/235 (19%), Positives = 73/235 (31%), Gaps = 50/235 (21%)

Query: 32  IAIVTGANKGIGFALVKRLAELG---LTVILTARDVERGQR---AVESLSEKGLPVNFFQ 85
           + ++TG + GIG  L  RLA        V  T RD++   R   A  +L+     +   Q
Sbjct: 4   VVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQ 63

Query: 86  LDVSDPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLT 145
           LDV D  S+ A             ++ N        +     +   +V+  N  G   + 
Sbjct: 64  LDVRDSKSVAAARERVTEGRVD-VLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRML 122

Query: 146 ESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVK 205
           ++ LP  +R  S   +    S  G                           +GL    V 
Sbjct: 123 QAFLPDMKRRGSGRVL-VTGSVGG--------------------------LMGLPFNDV- 154

Query: 206 DGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ 260
                          Y  SK AL      LA      G+ ++    G   T+  +
Sbjct: 155 ---------------YCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFME 194

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 94.0 bits (233), Expect = 2e-23
 Identities = 47/230 (20%), Positives = 75/230 (32%), Gaps = 52/230 (22%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           + I+T A +GIG A     A  G  VI T  +  + Q       EK   +    LDV+  
Sbjct: 8   VIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQEL-----EKYPGIQTRVLDVTKK 62

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVS-FNDIYKNTVEHAETVIRTNFYGAKLLTESLLP 150
             I+ F +  +     LD+L N AG      +     +  +  +  N     L+ ++ LP
Sbjct: 63  KQIDQFANEVER----LDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLP 118

Query: 151 LFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWK 210
                     I+N+SS   ++                                       
Sbjct: 119 KMLAQK-SGNIINMSSVASSV--------------------------------------- 138

Query: 211 SQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ 260
                     Y+ +K A+   T  +A  +  +GI  N  CPG   T   Q
Sbjct: 139 --KGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQ 186

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} Length = 266

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

 Score = 93.0 bits (230), Expect = 9e-23
 Identities = 38/240 (15%), Positives = 69/240 (28%), Gaps = 40/240 (16%)

Query: 33  AIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAV--ESLSEKGLPVNFFQLDVSD 90
           A++TG  + IG ++  RL + G  V++  R  E   + +  E  + +       + D+S 
Sbjct: 4   AVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSL 63

Query: 91  PSS----IEAFVSWFKSNFAALDILVNNAGVSF-NDIYKNTVEHAETVIRTNFYGAKLLT 145
            SS     E  +      F   D+LVNNA   +   +      +     +          
Sbjct: 64  SSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVA--- 120

Query: 146 ESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVK 205
                                      ++   N  + L        +         +++ 
Sbjct: 121 ---------------------------ELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLS 153

Query: 206 DGTWKSQGWPEIWTDYAV---SKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ 262
                          + V   +K AL   T   A       I VN+  PG +       Q
Sbjct: 154 VVNLCDAMTDLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMPQ 213

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 88.2 bits (218), Expect = 3e-21
 Identities = 41/241 (17%), Positives = 74/241 (30%), Gaps = 53/241 (21%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
             +VTG N+GIG A+ +RLA  G  V +T R     +                ++DV+D 
Sbjct: 9   SVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLF-----------GVEVDVTDS 57

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPL 151
            +++   +  + +   +++LV+NAG+S +       E     +                 
Sbjct: 58  DAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASR 117

Query: 152 FRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKS 211
             +     R++ I S  G                                          
Sbjct: 118 SMQRNKFGRMIFIGSVSGLWG--------------------------------------- 138

Query: 212 QGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTADEAA 271
                   +YA SK  +      +A+      ++ N   PG+  T MT+         A 
Sbjct: 139 ---IGNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALDERIQQGAL 195

Query: 272 D 272
            
Sbjct: 196 Q 196

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score = 86.0 bits (212), Expect = 2e-20
 Identities = 42/249 (16%), Positives = 70/249 (28%), Gaps = 63/249 (25%)

Query: 33  AIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPS 92
           A+VTG   G+G A    L   G  V++                 +G  + + + DV+   
Sbjct: 4   ALVTGGASGLGRAAALALKARGYRVVVLDLR------------REGEDLIYVEGDVTREE 51

Query: 93  SIEAFVSWFKSNFAALDILVNN----AGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESL 148
            +   V+  +       ++       A         + +E    V+  N  G   +    
Sbjct: 52  DVRRAVARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLA 111

Query: 149 LPLFRRSPS-----KSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQS 203
               R +P      +  I+N +S                                     
Sbjct: 112 AWAMRENPPDAEGQRGVIVNTASVAAF--------------------------------- 138

Query: 204 VKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQG 263
                   +G       YA SK  + A T+  A+   G GI V +  PG   T + QG  
Sbjct: 139 --------EGQIG-QAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLP 189

Query: 264 SHTADEAAD 272
                  A 
Sbjct: 190 EKAKASLAA 198

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

 Score = 84.3 bits (208), Expect = 6e-20
 Identities = 41/241 (17%), Positives = 71/241 (29%), Gaps = 59/241 (24%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
             +V  A++GIG A+   L++ G  V + AR+ E  +R+            +   D+   
Sbjct: 6   GVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGH---------RYVVCDLRK- 55

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVS-FNDIYKNTVEHAETVIRTNFYGAKLLTESLLP 150
             ++      K     +DILV NAG        + T E  +  I + F            
Sbjct: 56  -DLDLLFEKVKE----VDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLN---------- 100

Query: 151 LFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWK 210
                                          I           E+  G  +         
Sbjct: 101 ------------------------------MIKIVRNYLPAMKEKGWGRIVAITSFSVIS 130

Query: 211 SQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGSHTADEA 270
                        +++AL  +   L+      GI+VN   PG+T+T   +   S    + 
Sbjct: 131 PIEN---LYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSEEKKKQ 187

Query: 271 A 271
            
Sbjct: 188 V 188

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 83.4 bits (205), Expect = 2e-19
 Identities = 42/247 (17%), Positives = 75/247 (30%), Gaps = 53/247 (21%)

Query: 32  IAIVTGA--NKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVS 89
            A+V G    + +GFA+  +L E G  V L+ +       A +     G     F+ DV+
Sbjct: 10  KALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALG-GALLFRADVT 68

Query: 90  DPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVE-----HAETVIRTNFYGAKLL 144
               ++A  +  K  F  LD LV+    +  +  +              +  + Y    +
Sbjct: 69  QDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAV 128

Query: 145 TESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSV 204
                PL R       I+ ++                                       
Sbjct: 129 ARRAEPLLREG---GGIVTLTYYAS----------------------------------- 150

Query: 205 KDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQGS 264
                  +  P+ +   A++K AL A    LA     +G+ VN+   G  +T   +    
Sbjct: 151 ------EKVVPK-YNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPG 203

Query: 265 HTADEAA 271
            T     
Sbjct: 204 FTKMYDR 210

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.8 bits (193), Expect = 8e-18
 Identities = 36/250 (14%), Positives = 69/250 (27%), Gaps = 51/250 (20%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           +A++TG   G+G A  +RL   G + +L       G+   + L    +          D 
Sbjct: 7   VAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDV 66

Query: 92  SSIEAFVSWFKSNFAALDIL----VNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTES 147
            +  A                   V +   +      +T+E  + V+  N  G   +   
Sbjct: 67  QTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRL 126

Query: 148 LLPLFRRS-----PSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQ 202
           +     ++       +  I+N +S                                    
Sbjct: 127 VAGEMGQNEPDQGGQRGVIINTASVAAF-------------------------------- 154

Query: 203 SVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ 262
                    +G       Y+ SK  +   T+ +A+     GI V +  PG   T +    
Sbjct: 155 ---------EGQVG-QAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSL 204

Query: 263 GSHTADEAAD 272
                +  A 
Sbjct: 205 PEKVCNFLAS 214

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

 Score = 78.4 bits (192), Expect = 1e-17
 Identities = 34/248 (13%), Positives = 76/248 (30%), Gaps = 54/248 (21%)

Query: 32  IAIVTGA--NKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVS 89
             +VTG      I + + + +   G  +  T ++ ++ +  VE  + +       Q DV+
Sbjct: 7   RILVTGVASKLSIAYGIAQAMHREGAELAFTYQN-DKLKGRVEEFAAQLGSDIVLQCDVA 65

Query: 90  DPSSIEAFVSWFKSNFAALDILVNNAGVS------FNDIYKNTVEHAETVIRTNFYGAKL 143
           + +SI+   +     +   D  V++ G +       + +   T E  +     + Y    
Sbjct: 66  EDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVA 125

Query: 144 LTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQS 203
           + ++   +     +   +L +S                                      
Sbjct: 126 MAKACRSMLNPGSA---LLTLSYLGAE--------------------------------- 149

Query: 204 VKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQG 263
                   +  P  +    ++K +L A    +A     EG+ VN+   G  +T    G  
Sbjct: 150 --------RAIPN-YNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIK 200

Query: 264 SHTADEAA 271
                 A 
Sbjct: 201 DFRKMLAH 208

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 75.3 bits (184), Expect = 1e-16
 Identities = 28/257 (10%), Positives = 69/257 (26%), Gaps = 64/257 (24%)

Query: 33  AIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPS 92
            IV G    +G A+++   + G TV+                ++  + V+  +       
Sbjct: 5   VIVYGGKGALGSAILEFFKKNGYTVLNIDLSAND-------QADSNILVDGNKNWTEQEQ 57

Query: 93  SIEAFVSWFKSNFAALDILVNN--AGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLP 150
           SI    +      + +D +          +   K+ V++A+ +I+ + + + +  +    
Sbjct: 58  SILEQTA-SSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAK---L 113

Query: 151 LFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWK 210
                     +    +                                            
Sbjct: 114 ATTHLKPGGLLQLTGAAAA----------------------------------------- 132

Query: 211 SQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEG--ISVNSYCPGFTQTSMTQGQGSH--- 265
             G       Y ++K A++  T  LA +  G     +V +  P    T M +    +   
Sbjct: 133 -MGPTPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWMPNADH 191

Query: 266 ----TADEAADVGARLL 278
                    ++   +  
Sbjct: 192 SSWTPLSFISEHLLKWT 208

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score = 75.7 bits (185), Expect = 1e-16
 Identities = 41/231 (17%), Positives = 73/231 (31%), Gaps = 39/231 (16%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
           I +++G   GIG A  K L   G  ++                            D+S  
Sbjct: 3   IIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE-----------------VIADLSTA 45

Query: 92  SSIE-AFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLP 150
              + A           +D LV  AG+          +    V+  N++GA  L ++ LP
Sbjct: 46  EGRKQAIADVLAKCSKGMDGLVLCAGLGPQT------KVLGNVVSVNYFGATELMDAFLP 99

Query: 151 LFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWK 210
             ++                   + +     +  D+      +E       +++ +    
Sbjct: 100 ALKK-----------GHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHA-- 146

Query: 211 SQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG 261
             G       YA SK AL       A  +   G+ +N+  PG T+T + Q 
Sbjct: 147 --GEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQA 195

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 74.9 bits (183), Expect = 2e-16
 Identities = 20/259 (7%), Positives = 57/259 (22%), Gaps = 68/259 (26%)

Query: 33  AIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPS 92
            +V G    +G   V+        V                  E+       ++  S   
Sbjct: 5   VLVYGGRGALGSRCVQAFRARNWWVASIDVVEN----------EEASASVIVKMTDSFTE 54

Query: 93  SIEAFVSWFKSNFAA--LDILVNNA--GVSFNDIYKNTVEHAETVIRTNFYGAKLLTESL 148
             +   +          +D ++  A      N   K+  ++ + + + + + + + +   
Sbjct: 55  QADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHL- 113

Query: 149 LPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGT 208
               +       +    ++                                         
Sbjct: 114 --ATKHLKEGGLLTLAGAKAA--------------------------------------- 132

Query: 209 WKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEG--ISVNSYCPGFTQTSMTQGQGSH- 265
                       Y ++K A++     LA +  G     +  +  P    T M +      
Sbjct: 133 ---LDGTPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMPEA 189

Query: 266 ------TADEAADVGARLL 278
                   +   +     +
Sbjct: 190 DFSSWTPLEFLVETFHDWI 208

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} Length = 284

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

 Score = 68.2 bits (165), Expect = 7e-14
 Identities = 21/107 (19%), Positives = 39/107 (36%), Gaps = 19/107 (17%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILT-ARDVERGQRAVESLSEKG------------ 78
           +A+VTGA K +G ++ + L   G  V L   R          +L+ +             
Sbjct: 4   VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLS 63

Query: 79  ------LPVNFFQLDVSDPSSIEAFVSWFKSNFAALDILVNNAGVSF 119
                 +        V+  +     V+   +++   D+LVNNA   +
Sbjct: 64  NVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFY 110

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

 Score = 65.5 bits (158), Expect = 5e-13
 Identities = 17/100 (17%), Positives = 45/100 (45%), Gaps = 3/100 (3%)

Query: 32  IAIVTGA--NKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVS 89
             ++ G   NK I + + +     G T+  T  + E  ++ V  ++++      ++LDVS
Sbjct: 7   KGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLN-ESLEKRVRPIAQELNSPYVYELDVS 65

Query: 90  DPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEH 129
                ++  +  K +  +LD +V++   +  +  + ++  
Sbjct: 66  KEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLE 105

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

 Score = 61.2 bits (147), Expect = 8e-12
 Identities = 15/93 (16%), Positives = 31/93 (33%), Gaps = 1/93 (1%)

Query: 31  TIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSD 90
            +A++ G    +G  L  RLA LG  +++ +R  E+ +             +   +   D
Sbjct: 2   RVALLGGT-GNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASITGMKNED 60

Query: 91  PSSIEAFVSWFKSNFAALDILVNNAGVSFNDIY 123
            +              A+D   +   +    I 
Sbjct: 61  AAEACDIAVLTIPWEHAIDTARDLKNILREKIV 93

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

 Score = 55.8 bits (133), Expect = 9e-10
 Identities = 45/272 (16%), Positives = 70/272 (25%), Gaps = 66/272 (24%)

Query: 22  SSTKWWSKETIAIVTGANKGIGFALVKRLAELG-LTVILTAR---DVERGQRAVESLSEK 77
           ++   W      +VTG   G+G  + + LA  G   ++L +R   D +     V  L   
Sbjct: 1   ATDDEWKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEAL 60

Query: 78  GLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTN 137
           G        DV+D  S+   +     +     +    A +    +   T E  E   R  
Sbjct: 61  GARTTVAACDVTDRESVRELLGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAK 120

Query: 138 FYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFV 197
             GA+ L E    L                                              
Sbjct: 121 VLGARNLHELTREL-------------------------------------------DLT 137

Query: 198 GLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTS 257
              L S     +   G P     YA       AY   LA++   +G+   +   G    S
Sbjct: 138 AFVLFSSFASAF---GAP-GLGGYAPGN----AYLDGLAQQRRSDGLPATAVAWGTWAGS 189

Query: 258 MT-----------QGQGSHTADEAADVGARLL 278
                         G      + A       L
Sbjct: 190 GMAEGPVADRFRRHGVIEMPPETACRALQNAL 221

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

 Score = 55.9 bits (133), Expect = 9e-10
 Identities = 20/111 (18%), Positives = 37/111 (33%), Gaps = 3/111 (2%)

Query: 32  IAIVTGA--NKGIGFALVKRLAELGLTVILTARDVER-GQRAVESLSEKGLPVNFFQLDV 88
             +V+G   +  I F + +   E G  ++LT  D  R  QR  + L  K   +     + 
Sbjct: 8   RILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNE 67

Query: 89  SDPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFY 139
              +S+   V+        LD +V++ G                    +  
Sbjct: 68  EHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKG 118

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} Length = 191

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

 Score = 54.5 bits (130), Expect = 1e-09
 Identities = 20/141 (14%), Positives = 40/141 (28%), Gaps = 11/141 (7%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDP 91
            A+V      +G      LA  G  V+L  R +++ Q A +S++++   VN    + +D 
Sbjct: 25  KAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRF-KVNVTAAETADD 83

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPL 151
           +S                 +     +    +        +                L   
Sbjct: 84  ASRAEA-------VKGAHFVFTAGAIGLELL---PQAAWQNESSIEIVADYNAQPPLGIG 133

Query: 152 FRRSPSKSRILNISSRLGTLS 172
              +  K +        G L 
Sbjct: 134 GIDATDKGKEYGGKRAFGALG 154

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 329

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 51.8 bits (122), Expect = 3e-08
 Identities = 13/123 (10%), Positives = 35/123 (28%), Gaps = 34/123 (27%)

Query: 32  IAIVTGA--NKGIGFALVKRLAELGLTVILTARDVERGQ-------------------RA 70
           I  + G     G G+ + K L++  + +I                             + 
Sbjct: 4   ICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKK 63

Query: 71  VESLSEKGLPVNFF-------------QLDVSDPSSIEAFVSWFKSNFAALDILVNNAGV 117
           +  L       +F              + ++    +IE   +     +  +++LV++   
Sbjct: 64  MNILDMLPFDASFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLAN 123

Query: 118 SFN 120
           +  
Sbjct: 124 AKE 126

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score = 50.6 bits (120), Expect = 8e-08
 Identities = 31/146 (21%), Positives = 49/146 (33%), Gaps = 21/146 (14%)

Query: 28  SKETIAIVTGANKGIGFALVKRLAELGLTVILTAR-----DVERGQRAVESLSEKGLPVN 82
           SK  +A++TG     G  L + L E G  V    R     + ER     +         +
Sbjct: 1   SK--VALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFH 58

Query: 83  FFQLDVSDPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAK 142
               D+SD S++   +   +      D + N   +S   +     E  E     +  G  
Sbjct: 59  LHYGDLSDTSNLTRILREVQ-----PDEVYNLGAMSHVAVS---FESPEYTADVDAMG-- 108

Query: 143 LLTESLLPLFRRS--PSKSRILNISS 166
             T  LL   R      K+R    S+
Sbjct: 109 --TLRLLEAIRFLGLEKKTRFYQAST 132

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 49.8 bits (117), Expect = 1e-07
 Identities = 10/49 (20%), Positives = 17/49 (34%), Gaps = 2/49 (4%)

Query: 32 IAIVTGA--NKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKG 78
           A + G   + G G+A+ K LA  G  +++                 K 
Sbjct: 10 RAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKF 58

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 46.3 bits (109), Expect = 2e-06
 Identities = 39/228 (17%), Positives = 71/228 (31%), Gaps = 39/228 (17%)

Query: 34  IVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSE--KGLPVNFFQLDVSDP 91
           ++TG    IG A+V+ + +     ++    +      +ESLS+  +    NF   D+ D 
Sbjct: 4   LITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGN-LESLSDISESNRYNFEHADICDS 62

Query: 92  SSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLL-- 149
           + I      ++      D +++ A  S  D     +      I TN  G   L E     
Sbjct: 63  AEITRIFEQYQ-----PDAVMHLAAESHVDRS---ITGPAAFIETNIVGTYALLEVARKY 114

Query: 150 --PLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDG 207
              L     +  R  +IS+      +V          +  ++             S    
Sbjct: 115 WSALGEDKKNNFRFHHIST-----DEVYGDLPHPDEVENSVTLPLFTETTAYAPSSP--- 166

Query: 208 TWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISV---NSYCPG 252
                        Y+ SK + +       + Y    I     N+Y P 
Sbjct: 167 -------------YSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPY 201

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

 Score = 45.8 bits (107), Expect = 3e-06
 Identities = 17/72 (23%), Positives = 29/72 (40%), Gaps = 4/72 (5%)

Query: 29  KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDV 88
           K+TIA V GA    G +L++  A +G  V      ++    A E  +     V  FQ  +
Sbjct: 3   KKTIA-VVGATGRQGASLIRVAAAVGHHVRAQVHSLKGL-IAEELQAIPN--VTLFQGPL 58

Query: 89  SDPSSIEAFVSW 100
            +   +   +  
Sbjct: 59  LNNVPLMDTLFE 70

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

 Score = 45.0 bits (105), Expect = 5e-06
 Identities = 19/114 (16%), Positives = 40/114 (35%), Gaps = 9/114 (7%)

Query: 34  IVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLP-VNFFQLDVSDPS 92
           +VTG +  IG     +L + G  VI+        +  +  +   G     F + D+ + +
Sbjct: 4   LVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEA 63

Query: 93  SIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTE 146
            +   +         +D +++ AG+        +V+        N  G   L  
Sbjct: 64  LMTEILHDHA-----IDTVIHFAGLKAVG---ESVQKPLEYYDNNVNGTLRLIS 109

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

 Score = 44.8 bits (104), Expect = 5e-06
 Identities = 15/73 (20%), Positives = 25/73 (34%), Gaps = 2/73 (2%)

Query: 35  VTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVN--FFQLDVSDPS 92
           VTGAN  +   +V++L E G  V  TAR   +     +    K           D+    
Sbjct: 16  VTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQG 75

Query: 93  SIEAFVSWFKSNF 105
           + +  +       
Sbjct: 76  AYDEVIKGAAGVA 88

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

 Score = 43.6 bits (101), Expect = 1e-05
 Identities = 20/132 (15%), Positives = 42/132 (31%), Gaps = 12/132 (9%)

Query: 34  IVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSS 93
           ++TG    +G  L       G+ +I+      +G               F   D+ + + 
Sbjct: 4   LITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKND 63

Query: 94  IEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFR 153
           +   ++ +       D   + A          ++++       N  G    T +LL   R
Sbjct: 64  VTRLITKYMP-----DSCFHLA---GQVAMTTSIDNPCMDFEINVGG----TLNLLEAVR 111

Query: 154 RSPSKSRILNIS 165
           +  S   I+  S
Sbjct: 112 QYNSNCNIIYSS 123

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 339

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 41.2 bits (95), Expect = 9e-05
 Identities = 19/96 (19%), Positives = 33/96 (34%), Gaps = 6/96 (6%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTAR-----DVERGQRAVESLSEKGLP-VNFFQ 85
           IA++TG     G  L + L   G  V    R     + +R               +    
Sbjct: 3   IALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHY 62

Query: 86  LDVSDPSSIEAFVSWFKSNFAALDILVNNAGVSFND 121
            D++D SS+  ++   K +        ++  VSF  
Sbjct: 63  ADLTDASSLRRWIDVIKPDEVYNLAAQSHVAVSFEI 98

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 40.8 bits (94), Expect = 1e-04
 Identities = 16/69 (23%), Positives = 23/69 (33%)

Query: 33  AIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPS 92
           A+VTG     G  L K L E G  V           R           + +   D++D  
Sbjct: 3   ALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADAC 62

Query: 93  SIEAFVSWF 101
           S++  V   
Sbjct: 63  SVQRAVIKA 71

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.7 bits (94), Expect = 1e-04
 Identities = 29/231 (12%), Positives = 61/231 (26%), Gaps = 52/231 (22%)

Query: 32  IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRA-VESLSEKGLP-----VNFFQ 85
           +A++TG     G  L + L E G  V    R         +E L +         +    
Sbjct: 3   VALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHY 62

Query: 86  LDVSDPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLT 145
            D++D + +   ++  K          ++  +SF+          E     +  G   L 
Sbjct: 63  GDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLA--------EYTADVDGVGTLRLL 114

Query: 146 ESLLPLFRRSPSKSRILNISSRLGTLSKV-RNPNIKSILEDEELSEEQIERFVGLFLQSV 204
           +++        +  +    S+     S++          E                    
Sbjct: 115 DAVKTC--GLINSVKFYQAST-----SELYGKVQEIPQKETTPFYPR------------- 154

Query: 205 KDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISV---NSYCPG 252
                         + Y  +KL      +   + Y    ++    N   P 
Sbjct: 155 --------------SPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPR 191

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

 Score = 40.6 bits (93), Expect = 1e-04
 Identities = 14/77 (18%), Positives = 25/77 (32%), Gaps = 2/77 (2%)

Query: 25  KWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFF 84
            +W  + +  VTG     G  L   L  +G TV   +          E+       +   
Sbjct: 4   SFWQGKRV-FVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADG-MQSE 61

Query: 85  QLDVSDPSSIEAFVSWF 101
             D+ D + +   +  F
Sbjct: 62  IGDIRDQNKLLESIREF 78

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 40.4 bits (93), Expect = 2e-04
 Identities = 35/223 (15%), Positives = 63/223 (28%), Gaps = 39/223 (17%)

Query: 34  IVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSE-KGLPVNFFQLDVSDPS 92
           IVTG    IG   V  +      V +T  D         +L    G  V     D++D  
Sbjct: 6   IVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAE 65

Query: 93  SIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLF 152
            ++   +   +           +         N++      I TNF G    T +LL   
Sbjct: 66  LVDKLAAKADAIV----HYAAESHN------DNSLNDPSPFIHTNFIG----TYTLLEAA 111

Query: 153 RRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQ 212
           R+   +   ++     G L    +         E+ + E                     
Sbjct: 112 RKYDIRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPS--------------- 156

Query: 213 GWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISV---NSYCPG 252
                 + Y+ +K A +       + +  +       N+Y P 
Sbjct: 157 ------SPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPY 193

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

 Score = 39.9 bits (92), Expect = 2e-04
 Identities = 32/228 (14%), Positives = 76/228 (33%), Gaps = 62/228 (27%)

Query: 28  SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLD 87
           +K+ +  + G    +G A+ ++L + G   ++                         +L+
Sbjct: 1   AKQRV-FIAGHRGMVGSAIRRQLEQRGDVELVL--------------------RTRDELN 39

Query: 88  VSDPSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTES 147
           + D  ++  F +  +     +D +   A      +  NT  +    I  N         +
Sbjct: 40  LLDSRAVHDFFASER-----IDQVYLAAAKVGGIVANNT--YPADFIYQNMMI----ESN 88

Query: 148 LLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDG 207
           ++    ++    ++L + S     S +           + ++E ++ +           G
Sbjct: 89  IIHAAHQNDVN-KLLFLGS-----SCIYPKL-----AKQPMAESELLQ-----------G 126

Query: 208 TWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISV---NSYCPG 252
           T +    P     YA++K+A         ++Y  +  SV   N Y P 
Sbjct: 127 TLEPTNEP-----YAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPH 169

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 39.5 bits (91), Expect = 3e-04
 Identities = 16/79 (20%), Positives = 29/79 (36%), Gaps = 7/79 (8%)

Query: 25  KWWSKETIAI-VTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNF 83
           ++W  E + I +TGA   I   + +RL   G  VI +        +  E ++E      F
Sbjct: 9   QYWPSENLKISITGAGGFIASHIARRLKHEGHYVIASDW------KKNEHMTEDMFCDEF 62

Query: 84  FQLDVSDPSSIEAFVSWFK 102
             +D+    +         
Sbjct: 63  HLVDLRVMENCLKVTEGVD 81

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 39.6 bits (91), Expect = 3e-04
 Identities = 19/76 (25%), Positives = 30/76 (39%), Gaps = 3/76 (3%)

Query: 28  SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLP-VNFFQL 86
           SK  I +VTG    IG   V  L E G   ++          +V  L       + F+++
Sbjct: 1   SK--IVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEV 58

Query: 87  DVSDPSSIEAFVSWFK 102
           D+ D   +E     +K
Sbjct: 59  DLCDRKGLEKVFKEYK 74

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} Length = 281

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

 Score = 39.0 bits (89), Expect = 3e-04
 Identities = 14/69 (20%), Positives = 27/69 (39%), Gaps = 21/69 (30%)

Query: 34  IVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSS 93
           ++TGAN  +G  + K+L    + VI                     P +   LD+++  +
Sbjct: 5   LITGANGQLGREIQKQLKGKNVEVI---------------------PTDVQDLDITNVLA 43

Query: 94  IEAFVSWFK 102
           +  F +  K
Sbjct: 44  VNKFFNEKK 52

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

 Score = 39.0 bits (89), Expect = 5e-04
 Identities = 13/79 (16%), Positives = 26/79 (32%), Gaps = 1/79 (1%)

Query: 28  SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLD 87
           S+  I  + GA   IG  + K   +LG    L  R+      + ++   +    +   + 
Sbjct: 2   SRSRIL-LIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIV 60

Query: 88  VSDPSSIEAFVSWFKSNFA 106
                   + V   K+   
Sbjct: 61  HGSIDDHASLVEAVKNVDV 79

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.1 bits (87), Expect = 5e-04
 Identities = 8/35 (22%), Positives = 13/35 (37%)

Query: 34 IVTGANKGIGFALVKRLAELGLTVILTARDVERGQ 68
           + GA    G   + +  + G  V +  RD  R  
Sbjct: 7  AIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLP 41

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.5 bits (89), Expect = 6e-04
 Identities = 24/133 (18%), Positives = 50/133 (37%), Gaps = 22/133 (16%)

Query: 34  IVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSS 93
           ++TG    +G  L  +L   G  V +        +R VE        +     ++ +   
Sbjct: 5   LITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHW------IGHENFELINHDV 58

Query: 94  IEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFR 153
           +E         +  +D + + A  +    Y   + +    ++TN  G    T ++L L +
Sbjct: 59  VEPL-------YIEVDQIYHLASPASPPNY---MYNPIKTLKTNTIG----TLNMLGLAK 104

Query: 154 RSPSKSRILNISS 166
           R    +R+L  S+
Sbjct: 105 R--VGARLLLAST 115

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} Length = 298

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

 Score = 38.4 bits (87), Expect = 7e-04
 Identities = 12/69 (17%), Positives = 22/69 (31%), Gaps = 18/69 (26%)

Query: 34  IVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSS 93
           ++ G    +G+ L + LA +G  + L                        F  D S+P  
Sbjct: 4   LLFGKTGQVGWELQRSLAPVGNLIALDVHS------------------KEFCGDFSNPKG 45

Query: 94  IEAFVSWFK 102
           +   V   +
Sbjct: 46  VAETVRKLR 54

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

 Score = 36.7 bits (83), Expect = 0.002
 Identities = 14/76 (18%), Positives = 23/76 (30%), Gaps = 2/76 (2%)

Query: 35  VTGANKGIGFALVKRLAELGLTVILTARD--VERGQRAVESLSEKGLPVNFFQLDVSDPS 92
           + G    IG  +V     LG    +  R   V    +    L  K L     +  + D  
Sbjct: 8   IVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQ 67

Query: 93  SIEAFVSWFKSNFAAL 108
            +   +       +AL
Sbjct: 68  RLVDALKQVDVVISAL 83

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 35.6 bits (80), Expect = 0.004
 Identities = 16/111 (14%), Positives = 37/111 (33%), Gaps = 3/111 (2%)

Query: 31  TIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSD 90
           T+ +VTGA+   G  + K+L E        A+ + R  +  E +  +         D   
Sbjct: 5   TV-LVTGASGRTGQIVYKKLKEGSDKF--VAKGLVRSAQGKEKIGGEADVFIGDITDADS 61

Query: 91  PSSIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGA 141
            +     +       +A+  +      +     +   E  +   + ++ G 
Sbjct: 62  INPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQ 112

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	302
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	100.0
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	100.0
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	100.0
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	100.0
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	100.0
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	100.0
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	100.0
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	100.0
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	100.0
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	100.0
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	100.0
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	100.0
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	100.0
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	100.0
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	100.0
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	100.0
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	100.0
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	100.0
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	100.0
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	100.0
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	100.0
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	100.0
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	100.0
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	100.0
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	100.0
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	100.0
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	100.0
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	100.0
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	100.0
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	100.0
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	100.0
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	100.0
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	100.0
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	100.0
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	100.0
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	100.0
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	100.0
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	100.0
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	100.0
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	100.0
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	100.0
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	100.0
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	100.0
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	100.0
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	100.0
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	100.0
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	100.0
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	100.0
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	100.0
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	100.0
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	100.0
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	100.0
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	100.0
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	100.0
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	100.0
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	100.0
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	100.0
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	100.0
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	100.0
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	100.0
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	100.0
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	100.0
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	99.96
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.96
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	99.83
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.78
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.74
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.73
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.72
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	99.71
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.71
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	99.7
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.69
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	99.68
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.67
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.66
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	99.65
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	99.64
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.63
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.62
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	99.62
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.61
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.6
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	99.59
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	99.59
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.55
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.51
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.5
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.32
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.28
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	99.26
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	99.21
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.21
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.2
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	99.05
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	98.87
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.97
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	97.95
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	97.89
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	97.86
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	97.78
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	97.78
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.71
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	97.69
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	97.69
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	97.67
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	97.63
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	97.63
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	97.58
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	97.56
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	97.56
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	97.47
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	97.43
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.42
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	97.39
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	97.32
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	97.3
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.25
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	97.23
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	97.22
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	97.19
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	97.16
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	97.14
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	97.13
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	97.1
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	97.08
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	97.06
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	97.04
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	97.04
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	97.03
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	96.98
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	96.97
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	96.93
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	96.89
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	96.88
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	96.87
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	96.85
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	96.79
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	96.76
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	96.69
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	96.68
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	96.68
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	96.64
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	96.6
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	96.54
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.5
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	96.5
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	96.48
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.45
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	96.44
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	96.36
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	96.36
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	96.36
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	96.34
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	96.32
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	96.27
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	96.16
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	96.07
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	95.98
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	95.98
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	95.94
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	95.89
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	95.79
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	95.72
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	95.69
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	95.37
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	95.24
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	95.24
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	95.14
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	95.1
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	94.97
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	94.96
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	94.92
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	94.9
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	94.8
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	94.76
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	94.74
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	94.71
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	94.59
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	94.57
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	94.55
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	94.51
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	94.47
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	94.46
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	94.43
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	94.4
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	94.35
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	94.27
d1wy7a1	201	Hypothetical protein PH1948 {Archaeon Pyrococcus h	94.25
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	94.22
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	94.1
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	94.09
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	94.09
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	94.07
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	93.96
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	93.95
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	93.78
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	93.77
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	93.57
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	93.57
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	93.56
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	93.55
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	93.51
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	93.44
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	93.32
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	93.31
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	93.2
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	93.15
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	93.12
d1u0sy_	118	CheY protein {Thermotoga maritima [TaxId: 2336]}	93.1
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	93.05
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	93.03
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	93.03
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	93.03
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	92.98
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	92.93
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	92.91
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	92.89
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	92.75
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	92.61
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	92.5
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	92.48
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	92.38
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	92.31
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	92.23
d2fr1a2	209	Erythromycin synthase, eryAI, 1st ketoreductase mo	92.19
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	91.88
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	91.67
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	91.66
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	91.48
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	91.47
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	91.25
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	91.08
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	91.04
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	91.0
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	90.97
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	90.53
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	90.33
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	90.09
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	90.05
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	90.01
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	89.87
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	89.84
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	89.72
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	89.65
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	89.43
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	89.11
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	89.07
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	89.0
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	88.98
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	88.88
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	88.81
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	88.19
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	88.14
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	88.04
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	87.79
d1nv8a_	271	N5-glutamine methyltransferase, HemK {Thermotoga m	87.77
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	87.7
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	87.56
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	87.55
d1krwa_	123	NTRC receiver domain {Salmonella typhimurium [TaxI	87.54
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	87.42
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	87.3
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	87.16
d1byia_	224	Dethiobiotin synthetase {Escherichia coli [TaxId:	86.98
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	86.93
d2igta1	309	Putative methyltransferase Atu0340 {Agrobacterium	86.87
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	86.72
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	86.63
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	86.55
d1ihua2	279	Arsenite-translocating ATPase ArsA {Escherichia co	86.21
d1peya_	119	Sporulation response regulator Spo0F {Bacillus sub	86.18
d1gtma1	239	Glutamate dehydrogenase {Archaeon Pyrococcus furio	86.14
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	86.06
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	85.86
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	85.75
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	85.67
d2esra1	152	Putative methyltransferase SPy1538 {Streptococcus	85.66
d2csua3	163	Acetate-CoA ligase alpha chain, AcdA, domains 2 an	85.52
d1up7a1	162	6-phospho-beta-glucosidase {Thermotoga maritima [T	85.19
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	85.15
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	85.12
d1ws6a1	171	Methyltransferase TTHA0928 {Thermus thermophilus [	84.67
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	84.28
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	84.16
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	84.13
d1dbwa_	123	Transcriptional regulatory protein FixJ, receiver	83.83
d1y0pa2	308	Flavocytochrome c3 (respiratory fumarate reductase	83.74
d1iuka_	136	Hypothetical protein TT1466 {Thermus thermophilus	83.7
d1g3qa_	237	Cell division regulator MinD {Archaeon Pyrococcus	83.6
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	83.21
d1m6ia2	137	Apoptosis-inducing factor (AIF) {Human (Homo sapie	82.51
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	82.2
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	81.97
d1v71a1	318	Hypothetical protein C320.14 (SPCC320.14, SPCC330.	81.77
d1ys7a2	121	Transcriptional regulatory protein PrrA, N-termina	81.55
d1s6ya1	169	6-phospho-beta-glucosidase {Bacillus stearothermop	81.48
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	81.04
d1r18a_	223	Protein-L-isoaspartyl O-methyltransferase {Fruit f	81.03
d1g6q1_	328	Arginine methyltransferase, HMT1 {Baker's yeast (S	80.4
d1m1na_	477	Nitrogenase iron-molybdenum protein, alpha chain {	80.33
d1c4oa2	174	Nucleotide excision repair enzyme UvrB {Thermus th	80.18
d2f5va1	379	Pyranose 2-oxidase {White-rot fungus (Peniophora s	80.18
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	80.14
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	80.1

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=5e-47  Score=337.84  Aligned_cols=229  Identities=27%  Similarity=0.362  Sum_probs=208.2

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      +++.+|++|||||++|||+++|++|+++|++|++++|+.++++++.+++++.+.++.++.+|++|+++++++++++.+++
T Consensus         6 f~lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~   85 (251)
T d2c07a1           6 YCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEH   85 (251)
T ss_dssp             CCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhc
Confidence            66899999999999999999999999999999999999999999999999888899999999999999999999999999


Q ss_pred             CCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccc
Q 022103          106 AALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILE  184 (302)
Q Consensus       106 g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~  184 (302)
                      |++|+||||||.... ++.+.+.++|++++++|+.++++++|+++|.|.++ +.|+||++||..+..+.+.         
T Consensus        86 g~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~-~~G~IVnisS~~~~~~~~~---------  155 (251)
T d2c07a1          86 KNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINN-RYGRIINISSIVGLTGNVG---------  155 (251)
T ss_dssp             SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHH-TCEEEEEECCTHHHHCCTT---------
T ss_pred             CCceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccC-CCeEEEEECCHHhcCCCCC---------
Confidence            999999999998755 67889999999999999999999999999999987 6799999999998765432         


Q ss_pred             hhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCCC-
Q 022103          185 DEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQG-  263 (302)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~~-  263 (302)
                                                       +.+|++||+|+++|+|+||.|++++|||||+|+||+|+|+|..... 
T Consensus       156 ---------------------------------~~~Y~asKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~  202 (251)
T d2c07a1         156 ---------------------------------QANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKISE  202 (251)
T ss_dssp             ---------------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CCH
T ss_pred             ---------------------------------CHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCEecccccccCH
Confidence                                             3789999999999999999999999999999999999999987642 


Q ss_pred             --------------CCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          264 --------------SHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       264 --------------~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                                    ..+|+|+|..+++|++ +...+++|+.+..+|+..
T Consensus       203 ~~~~~~~~~~pl~R~~~pedvA~~v~fL~S-~~s~~itG~~i~vDGG~s  250 (251)
T d2c07a1         203 QIKKNIISNIPAGRMGTPEEVANLACFLSS-DKSGYINGRVFVIDGGLS  250 (251)
T ss_dssp             HHHHHHHTTCTTSSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTSC
T ss_pred             HHHHHHHhcCCCCCCcCHHHHHHHHHHHhC-chhCCCcCcEEEECCCcC
Confidence                          2579999999999997 678899999999999854

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=5.6e-47  Score=338.26  Aligned_cols=231  Identities=20%  Similarity=0.233  Sum_probs=212.5

Q ss_pred             cccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhh
Q 022103           25 KWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSN  104 (302)
Q Consensus        25 ~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~  104 (302)
                      .+.++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++++.+.++.++.+|++++++++++++++.++
T Consensus         6 ~m~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~   85 (255)
T d1fmca_           6 NLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISK   85 (255)
T ss_dssp             GGCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            56789999999999999999999999999999999999999999999999998889999999999999999999999999


Q ss_pred             CCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccc
Q 022103          105 FAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILE  184 (302)
Q Consensus       105 ~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~  184 (302)
                      ||++|+||||||.......+.+.++|++++++|+.++++++|+++|+|.++ +.++||++||..+..+.+          
T Consensus        86 ~g~iDilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~-~~g~Ii~isS~~~~~~~~----------  154 (255)
T d1fmca_          86 LGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKN-GGGVILTITSMAAENKNI----------  154 (255)
T ss_dssp             HSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTCCCT----------
T ss_pred             cCCCCEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhccc-cccccccccccchhcccc----------
Confidence            999999999999876655689999999999999999999999999999988 678999999998876543          


Q ss_pred             hhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCCC-
Q 022103          185 DEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQG-  263 (302)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~~-  263 (302)
                                                      ++.+|++||+|+++|+++||.|++++|||||+|+||+|+|+|..... 
T Consensus       155 --------------------------------~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~  202 (255)
T d1fmca_         155 --------------------------------NMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVIT  202 (255)
T ss_dssp             --------------------------------TCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCC
T ss_pred             --------------------------------ccccchhHHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhhccCC
Confidence                                            34789999999999999999999999999999999999999866531 


Q ss_pred             ---------------CCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcccC
Q 022103          264 ---------------SHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVK  299 (302)
Q Consensus       264 ---------------~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  299 (302)
                                     ..+|+|+|..+++|++ +...+++|+.+..||+.+.
T Consensus       203 ~e~~~~~~~~~pl~R~g~pedvA~~v~fL~S-~~s~~itG~~i~vDGG~~~  252 (255)
T d1fmca_         203 PEIEQKMLQHTPIRRLGQPQDIANAALFLCS-PAASWVSGQILTVSGGGVQ  252 (255)
T ss_dssp             HHHHHHHHHTCSSCSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTSCC
T ss_pred             HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC-chhcCCcCCEEEECcCccc
Confidence                           2579999999999997 7888999999999999753

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=1.9e-46  Score=334.14  Aligned_cols=230  Identities=27%  Similarity=0.401  Sum_probs=207.6

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhh-CCCceeEEEeeCCCHHHHHHHHHHHHhh
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSE-KGLPVNFFQLDVSDPSSIEAFVSWFKSN  104 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dlt~~~~~~~~~~~~~~~  104 (302)
                      |+++||++|||||++|||+++|+.|+++|++|++++|+.+++++..+++.+ .+.++.++.+|++++++++++++++.++
T Consensus         1 f~l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   80 (251)
T d1vl8a_           1 FDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEK   80 (251)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            579999999999999999999999999999999999999999999888754 4678899999999999999999999999


Q ss_pred             CCCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCccccccc
Q 022103          105 FAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSIL  183 (302)
Q Consensus       105 ~g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~  183 (302)
                      +|+||+||||||.... ++.+.+.++|++++++|+.++++++|+++|+|+++ +.|+||+++|..+....          
T Consensus        81 ~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~-~~G~Ii~i~S~~~~~~~----------  149 (251)
T d1vl8a_          81 FGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRES-DNPSIINIGSLTVEEVT----------  149 (251)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTC-SSCEEEEECCGGGTCCC----------
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhccccc-ccccccccccchhcccc----------
Confidence            9999999999998654 68999999999999999999999999999999987 67999999997654321          


Q ss_pred             chhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC-
Q 022103          184 EDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ-  262 (302)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~-  262 (302)
                                                     ++++.+|++||+|+++|+++||.|++++|||||+|+||+|+|+|.... 
T Consensus       150 -------------------------------~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~  198 (251)
T d1vl8a_         150 -------------------------------MPNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVF  198 (251)
T ss_dssp             -------------------------------SSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHH
T ss_pred             -------------------------------CccccchHHHHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhcc
Confidence                                           223478999999999999999999999999999999999999997642 


Q ss_pred             ----------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          263 ----------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       263 ----------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                                      +..+|+|+|..+++|++ +...+++|+.+..||++.
T Consensus       199 ~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S-~~a~~itG~~i~vDGG~t  249 (251)
T d1vl8a_         199 SDPEKLDYMLKRIPLGRTGVPEDLKGVAVFLAS-EEAKYVTGQIIFVDGGWT  249 (251)
T ss_dssp             TCHHHHHHHHHTCTTSSCBCGGGGHHHHHHHHS-GGGTTCCSCEEEESTTGG
T ss_pred             CCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhC-chhCCCcCcEEEeCcCee
Confidence                            22579999999999997 678999999999999864

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=2.1e-46  Score=335.26  Aligned_cols=231  Identities=26%  Similarity=0.302  Sum_probs=197.0

Q ss_pred             ccccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHh
Q 022103           24 TKWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKS  103 (302)
Q Consensus        24 ~~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~  103 (302)
                      ..++++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+.+.++..+.+|++++++++++++++.+
T Consensus         2 ~~F~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   81 (259)
T d1xq1a_           2 QRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSS   81 (259)
T ss_dssp             CTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999999999999999999998888999999999999999999999999


Q ss_pred             hC-CCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCccccc
Q 022103          104 NF-AALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKS  181 (302)
Q Consensus       104 ~~-g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~  181 (302)
                      +| |++|+||||||.... ++.+.+.++|+.++++|+.++++++|+++|+|+++ +.|+||++||..+..+.+       
T Consensus        82 ~~~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~-~~G~Iv~isS~~~~~~~~-------  153 (259)
T d1xq1a_          82 MFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKAS-GCGNIIFMSSIAGVVSAS-------  153 (259)
T ss_dssp             HHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-SSCEEEEEC----------------
T ss_pred             HhCCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhccccc-cccccccccccccccccc-------
Confidence            98 789999999998755 68899999999999999999999999999999887 679999999999876533       


Q ss_pred             ccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCC
Q 022103          182 ILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG  261 (302)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~  261 (302)
                                                         ++.+|++||+|+++|+++||.|++++|||||+|+||+|+|+|...
T Consensus       154 -----------------------------------~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~  198 (259)
T d1xq1a_         154 -----------------------------------VGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEA  198 (259)
T ss_dssp             ------------------------------------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC------
T ss_pred             -----------------------------------ccccccccccchhhhhHHHHHHhcccCeEEEEeccCcccCHHhhh
Confidence                                               247899999999999999999999999999999999999999775


Q ss_pred             CC----------------CCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          262 QG----------------SHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       262 ~~----------------~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                      ..                ..+|+|+|+.+++|++ +...+++|+.+..||+..
T Consensus       199 ~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S-~~s~~iTG~~i~vDGG~s  250 (259)
T d1xq1a_         199 VYDDEFKKVVISRKPLGRFGEPEEVSSLVAFLCM-PAASYITGQTICVDGGLT  250 (259)
T ss_dssp             -------------------CCGGGGHHHHHHHTS-GGGTTCCSCEEECCCCEE
T ss_pred             hchHHHHHHHHhCCCCCCCcCHHHHHHHHHHHhC-chhcCCcCcEEEeCCCEE
Confidence            41                1579999999999997 788899999999999864

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=100.00  E-value=2.1e-46  Score=335.29  Aligned_cols=231  Identities=27%  Similarity=0.355  Sum_probs=211.5

Q ss_pred             cccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhh
Q 022103           25 KWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSN  104 (302)
Q Consensus        25 ~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~  104 (302)
                      +++++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+.+.++.++.+|++|+++++++++++.++
T Consensus         3 ~f~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   82 (259)
T d2ae2a_           3 RWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANH   82 (259)
T ss_dssp             TTCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHH
Confidence            47899999999999999999999999999999999999999999999999998889999999999999999999999999


Q ss_pred             CC-CccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccc
Q 022103          105 FA-ALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSI  182 (302)
Q Consensus       105 ~g-~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~  182 (302)
                      ++ ++|+||||||.... ++.+.+.++|++++++|+.++++++|+++|+|.++ ..|+||+++|..+..+.+        
T Consensus        83 ~~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~-~~G~Ii~isS~~~~~~~~--------  153 (259)
T d2ae2a_          83 FHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKAS-ERGNVVFISSVSGALAVP--------  153 (259)
T ss_dssp             TTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-SSEEEEEECCGGGTSCCT--------
T ss_pred             hCCCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhh-cccccccccccccccccc--------
Confidence            86 79999999998755 68899999999999999999999999999999987 679999999998875533        


Q ss_pred             cchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC
Q 022103          183 LEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ  262 (302)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~  262 (302)
                                                        ++.+|++||+|+++|+|+||.|++++|||||+|+||+|+|+|.+..
T Consensus       154 ----------------------------------~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~  199 (259)
T d2ae2a_         154 ----------------------------------YEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMT  199 (259)
T ss_dssp             ----------------------------------TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHH
T ss_pred             ----------------------------------cccchHHHHHHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhh
Confidence                                              3478999999999999999999999999999999999999885421


Q ss_pred             --------------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcccC
Q 022103          263 --------------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVK  299 (302)
Q Consensus       263 --------------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  299 (302)
                                          +..+|+|+|..+++|++ +...+++|+.+..||+.+.
T Consensus       200 ~~~~~~~~~~~~~~~~~pl~R~g~pedvA~~v~fL~S-~~s~~itG~~i~VDGG~~a  255 (259)
T d2ae2a_         200 IQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCF-PAASYVTGQIIYVDGGLMA  255 (259)
T ss_dssp             TTSHHHHHHHHHHHHTSTTCSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGGG
T ss_pred             hhchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC-chhCCCcCcEEEECCCeEe
Confidence                                23579999999999997 7788999999999999754

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=5.1e-46  Score=329.95  Aligned_cols=226  Identities=24%  Similarity=0.321  Sum_probs=207.1

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      .++||+++||||++|||+++|+.|+++|++|++++|+.+++++..+++.   .++.++.+|++|+++++++++++.+++|
T Consensus         3 ~L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   79 (244)
T d1nffa_           3 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELA---DAARYVHLDVTQPAQWKAAVDTAVTAFG   79 (244)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTG---GGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh---CcceEEEeecCCHHHHHHHHHHHHHHhC
Confidence            4789999999999999999999999999999999999999998888875   3788999999999999999999999999


Q ss_pred             CccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccch
Q 022103          107 ALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILED  185 (302)
Q Consensus       107 ~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~  185 (302)
                      ++|+||||||.... ++.+.+.++|++++++|+.++++++|++.|.|.++ ..|+||++||..+..+.+           
T Consensus        80 ~idilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~-~~G~Ii~isS~~~~~~~~-----------  147 (244)
T d1nffa_          80 GLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEA-GRGSIINISSIEGLAGTV-----------  147 (244)
T ss_dssp             CCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTSCCT-----------
T ss_pred             CCeEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhc-CcceEEeccccccccccc-----------
Confidence            99999999998755 68899999999999999999999999999999987 679999999999876543           


Q ss_pred             hhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCCC--
Q 022103          186 EELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQG--  263 (302)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~~--  263 (302)
                                                     ++.+|+++|+|+++|+|+||.|++++|||||+|+||+|+|+|.....  
T Consensus       148 -------------------------------~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~  196 (244)
T d1nffa_         148 -------------------------------ACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWVPED  196 (244)
T ss_dssp             -------------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTSCTT
T ss_pred             -------------------------------cccchhhHHHHHHHHHHHHHHHhcccCEEEEEEeeCCccChhHhhhhHH
Confidence                                           24789999999999999999999999999999999999999976532  


Q ss_pred             --------CCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcccC
Q 022103          264 --------SHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVK  299 (302)
Q Consensus       264 --------~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  299 (302)
                              ..+|+|+|..+++|++ +...+++|+.+..+|+.+.
T Consensus       197 ~~~~pl~R~~~p~diA~~v~fL~s-~~s~~itG~~i~vDGG~~a  239 (244)
T d1nffa_         197 IFQTALGRAAEPVEVSNLVVYLAS-DESSYSTGAEFVVDGGTVA  239 (244)
T ss_dssp             CSCCSSSSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGGG
T ss_pred             HHhccccCCCCHHHHHHHHHHHhC-hhhCCCcCCEEEECCCeec
Confidence                    3689999999999997 6788999999999998764

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=100.00  E-value=5.7e-46  Score=330.19  Aligned_cols=226  Identities=27%  Similarity=0.323  Sum_probs=197.4

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      .++||++|||||++|||+++|+.|+++|++|++++|+..+  ...+.+++.+.++.++.+|++|+++++++++++.++||
T Consensus         2 rL~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~--~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G   79 (247)
T d2ew8a1           2 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAP--EAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFG   79 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCH--HHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchH--HHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHcC
Confidence            4789999999999999999999999999999999998753  33445666678999999999999999999999999999


Q ss_pred             CccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccch
Q 022103          107 ALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILED  185 (302)
Q Consensus       107 ~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~  185 (302)
                      ++|+||||||+... ++.+.+.++|++++++|+.++++++|+++|.|+++ +.|+||++||..+..+.+.          
T Consensus        80 ~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~-~~G~Iv~isS~~~~~~~~~----------  148 (247)
T d2ew8a1          80 RCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRN-GWGRIINLTSTTYWLKIEA----------  148 (247)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGGSCCSS----------
T ss_pred             CCCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhc-CCCCccccccchhcccCcc----------
Confidence            99999999998755 68899999999999999999999999999999987 5799999999998765432          


Q ss_pred             hhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCCC--
Q 022103          186 EELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQG--  263 (302)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~~--  263 (302)
                                                      +.+|++||+|+++|+++||.|++++|||||+|+||+|+|+|.....  
T Consensus       149 --------------------------------~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~  196 (247)
T d2ew8a1         149 --------------------------------YTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALS  196 (247)
T ss_dssp             --------------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC-----------
T ss_pred             --------------------------------cccchhhhccHHHHHHHHHHHhcccCeEEEEEeeCCCCCccccccccc
Confidence                                            4789999999999999999999999999999999999999975431  


Q ss_pred             ---------------CCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          264 ---------------SHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       264 ---------------~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                                     ..+|+|+|..+++|++ +...+++|+.+..||+.+
T Consensus       197 ~~~~~~~~~~~~l~r~~~pedvA~~v~fL~S-~~s~~itG~~i~vDGG~~  245 (247)
T d2ew8a1         197 AMFDVLPNMLQAIPRLQVPLDLTGAAAFLAS-DDASFITGQTLAVDGGMV  245 (247)
T ss_dssp             -------CTTSSSCSCCCTHHHHHHHHHHTS-GGGTTCCSCEEEESSSCC
T ss_pred             hhHHHHHHHhccCCCCCCHHHHHHHHHHHhC-chhcCCcCCeEEECCCEe
Confidence                           2579999999999997 678899999999999864

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=3.2e-46  Score=331.10  Aligned_cols=224  Identities=30%  Similarity=0.386  Sum_probs=205.4

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      +++||+++||||++|||+++|+.|+++|++|++++|+.++++++.+++..   ++..+.+|++++++++++++++.+++|
T Consensus         1 dl~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~~---~~~~~~~Dv~~~~~v~~~~~~~~~~~g   77 (243)
T d1q7ba_           1 NFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGA---NGKGLMLNVTDPASIESVLEKIRAEFG   77 (243)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGG---GEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCC---CCcEEEEEecCHHHhhhhhhhhhcccC
Confidence            57999999999999999999999999999999999999999999888853   678899999999999999999999999


Q ss_pred             CccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccch
Q 022103          107 ALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILED  185 (302)
Q Consensus       107 ~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~  185 (302)
                      ++|+||||||.... ++.+.+.++|++++++|+.++++++|+++|+|.++ +.|+||++||..+..+.+           
T Consensus        78 ~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~-~~G~II~isS~~~~~~~~-----------  145 (243)
T d1q7ba_          78 EVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKK-RHGRIITIGSVVGTMGNG-----------  145 (243)
T ss_dssp             SCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCHHHHHCCT-----------
T ss_pred             CcceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHc-CCCEeeeecchhhcCCCC-----------
Confidence            99999999998755 68899999999999999999999999999999887 579999999998876533           


Q ss_pred             hhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCCC--
Q 022103          186 EELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQG--  263 (302)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~~--  263 (302)
                                                     ++.+|++||+|+++|+++||.|++++|||||+|+||+|+|+|.+...  
T Consensus       146 -------------------------------~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~  194 (243)
T d1q7ba_         146 -------------------------------GQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRALSDD  194 (243)
T ss_dssp             -------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHH
T ss_pred             -------------------------------CCHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecceEechhhhhhhhh
Confidence                                           24789999999999999999999999999999999999999976542  


Q ss_pred             -------------CCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          264 -------------SHTADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       264 -------------~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                                   ..+|+|+|..+.+|++ +...+++|+.+..+|+.
T Consensus       195 ~~~~~~~~~pl~R~~~pedvA~~v~fL~S-~~s~~itGq~i~vdGG~  240 (243)
T d1q7ba_         195 QRAGILAQVPAGRLGGAQEIANAVAFLAS-DEAAYITGETLHVNGGM  240 (243)
T ss_dssp             HHHHHHTTCTTSSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTS
T ss_pred             HHHHHHhcCCCCCCCCHHHHHHHHHHHhC-chhcCCcCCeEEECCCe
Confidence                         2589999999999997 77889999999999974

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=100.00  E-value=5.1e-46  Score=331.89  Aligned_cols=226  Identities=26%  Similarity=0.348  Sum_probs=207.1

Q ss_pred             CcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCcc
Q 022103           30 ETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALD  109 (302)
Q Consensus        30 ~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id  109 (302)
                      +|+||||||++|||+++|++|+++|++|++++|+.++++++.+++++.+.++.++.+|++|+++++++++++.++||++|
T Consensus         1 KKValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   80 (255)
T d1gega_           1 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFD   80 (255)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCC
T ss_pred             CCEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCcc
Confidence            47899999999999999999999999999999999999999999999888999999999999999999999999999999


Q ss_pred             EEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhh
Q 022103          110 ILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEEL  188 (302)
Q Consensus       110 ~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  188 (302)
                      +||||||+... ++.+.+.++|++++++|++++++++|+++|+|.+++..++||++||..+..+.+.             
T Consensus        81 ilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~-------------  147 (255)
T d1gega_          81 VIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPE-------------  147 (255)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTT-------------
T ss_pred             EEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcccCcc-------------
Confidence            99999998755 6889999999999999999999999999998887756788999999988765432             


Q ss_pred             cHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC------
Q 022103          189 SEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ------  262 (302)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~------  262 (302)
                                                   +.+|++||+|+++|+++||.|++++|||||+|+||+|+|+|+...      
T Consensus       148 -----------------------------~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~  198 (255)
T d1gega_         148 -----------------------------LAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSE  198 (255)
T ss_dssp             -----------------------------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHH
T ss_pred             -----------------------------cccchhCHHHHHhhHHHHHHHhhhhCcEEEEEecCcccChHHhhhhhhhHh
Confidence                                         478999999999999999999999999999999999999874321      


Q ss_pred             --------------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          263 --------------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       263 --------------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                                          +..+|+|+|..+++|++ +...+++|+.+..||+.+
T Consensus       199 ~~~~~~~~~~~~~~~~~pl~R~~~peevA~~v~fL~S-~~a~~itG~~i~vDGG~~  253 (255)
T d1gega_         199 AAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLAS-PDSDYMTGQSLLIDGGMV  253 (255)
T ss_dssp             HHTCCTTHHHHHHHTTCTTCSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESSSSS
T ss_pred             hhcccchhHHHHHHhcCCCCCCcCHHHHHHHHHHHhC-chhCCccCcEEEecCCEE
Confidence                                23589999999999997 788999999999999865

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=100.00  E-value=9.1e-46  Score=331.47  Aligned_cols=230  Identities=24%  Similarity=0.279  Sum_probs=208.8

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChh-hHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhh
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVE-RGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSN  104 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~-~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~  104 (302)
                      .+++||+++||||++|||+++|++|+++|++|++++|+.+ .++.+.+++++.+.++.++.+|++|+++++++++++.++
T Consensus         3 ~dL~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~   82 (261)
T d1geea_           3 KDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKE   82 (261)
T ss_dssp             GGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            3699999999999999999999999999999999999864 678888999988889999999999999999999999999


Q ss_pred             CCCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCccccccc
Q 022103          105 FAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSIL  183 (302)
Q Consensus       105 ~g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~  183 (302)
                      +|+||+||||||+..+ ++.+.+.++|++++++|+.++++++|+++|.|.+++..++||++||..+..+.+.        
T Consensus        83 ~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~~~~--------  154 (261)
T d1geea_          83 FGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPL--------  154 (261)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTT--------
T ss_pred             hCCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcccCcc--------
Confidence            9999999999998755 6889999999999999999999999999999988855567999999988765432        


Q ss_pred             chhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC-
Q 022103          184 EDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ-  262 (302)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~-  262 (302)
                                                        +.+|++||+|+++|+++||.|++++|||||+|+||+|+|+|.... 
T Consensus       155 ----------------------------------~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~  200 (261)
T d1geea_         155 ----------------------------------FVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKF  200 (261)
T ss_dssp             ----------------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHH
T ss_pred             ----------------------------------ccccccCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhhhc
Confidence                                              478999999999999999999999999999999999999996532 


Q ss_pred             ----------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          263 ----------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       263 ----------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                                      +..+|+|+|..+++|++ +...+++|+.+..||+..
T Consensus       201 ~~~~~~~~~~~~~pl~R~~~pediA~~v~fL~S-~~s~~itG~~i~vDGG~s  251 (261)
T d1geea_         201 ADPEQRADVESMIPMGYIGEPEEIAAVAAWLAS-SEASYVTGITLFADGGMT  251 (261)
T ss_dssp             HSHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGG
T ss_pred             CCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhC-chhcCCcCCeEEECCCee
Confidence                            22589999999999997 788899999999999863

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=100.00  E-value=1.3e-45  Score=330.17  Aligned_cols=227  Identities=24%  Similarity=0.348  Sum_probs=201.6

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecC-hhhHHHHHHHHhhC-CCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARD-VERGQRAVESLSEK-GLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~-~~~~~~~~~~l~~~-~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      |+||++|||||++|||+++|++|+++|++|++++|+ .+.++++.+++.+. +.++.++.+|++|+++++++++++.++|
T Consensus         2 L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   81 (260)
T d1x1ta1           2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            689999999999999999999999999999999997 46677777777543 6688999999999999999999999999


Q ss_pred             CCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccc
Q 022103          106 AALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILE  184 (302)
Q Consensus       106 g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~  184 (302)
                      |++|+||||||.... ++.+.+.++|++++++|+.++++++|+++|+|+++ +.|+||+++|..+..+.+          
T Consensus        82 G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~-~~G~Iv~isS~~~~~~~~----------  150 (260)
T d1x1ta1          82 GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQ-GFGRIINIASAHGLVASA----------  150 (260)
T ss_dssp             SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTSCCT----------
T ss_pred             CCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhc-CCceEeecccccceeccC----------
Confidence            999999999998755 68899999999999999999999999999999987 579999999999876643          


Q ss_pred             hhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC--
Q 022103          185 DEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ--  262 (302)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~--  262 (302)
                                                      ++.+|++||+|+++|+++||.|++++|||||+|+||+|+|+|+...  
T Consensus       151 --------------------------------~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~  198 (260)
T d1x1ta1         151 --------------------------------NKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQIS  198 (260)
T ss_dssp             --------------------------------TCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC--------
T ss_pred             --------------------------------CcchhhhhhhhHHHhHHHHHHHhchhCcEEEEEecCCCCChhhhhhhh
Confidence                                            2478999999999999999999999999999999999999997542  


Q ss_pred             -------------------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          263 -------------------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       263 -------------------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                                               +..+|+|+|..+++|++ +...+++|+.+..||++.
T Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pediA~~v~fL~S-~~a~~itG~~i~vDGG~t  258 (260)
T d1x1ta1         199 ALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLAS-DAAAQITGTTVSVDGGWT  258 (260)
T ss_dssp             ----------------CHHHHCTTCCCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGG
T ss_pred             hhhhhcCCChHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC-hhhCCCcCCEEEECcchh
Confidence                                     12579999999999997 788899999999999864

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=100.00  E-value=1.7e-45  Score=327.85  Aligned_cols=229  Identities=23%  Similarity=0.321  Sum_probs=207.2

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      ..++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++.. +.++.++.+|++|+++++++++++.++|
T Consensus         2 nrL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (251)
T d1zk4a1           2 NRLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGT-PDQIQFFQHDSSDEDGWTKLFDATEKAF   80 (251)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC-TTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCC-CCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            358999999999999999999999999999999999999999999998865 4589999999999999999999999999


Q ss_pred             CCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccc
Q 022103          106 AALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILE  184 (302)
Q Consensus       106 g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~  184 (302)
                      |++|+||||||.... ++.+.+.++|++++++|+.++++++|+++|.|.+++..++||++||..+..+.+.         
T Consensus        81 G~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~~~~---------  151 (251)
T d1zk4a1          81 GPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPS---------  151 (251)
T ss_dssp             SSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTT---------
T ss_pred             CCceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceeccCCC---------
Confidence            999999999998755 6899999999999999999999999999999998854569999999998765432         


Q ss_pred             hhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHH--ccCCCcEEEEeecCcccCCCCCCC
Q 022103          185 DEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKR--YEGEGISVNSYCPGFTQTSMTQGQ  262 (302)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e--~~~~gI~V~~v~PG~v~T~~~~~~  262 (302)
                                                       +.+|++||+|+++|++++|.|  ++++|||||+|+||+|+|+|....
T Consensus       152 ---------------------------------~~~Y~asKaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~  198 (251)
T d1zk4a1         152 ---------------------------------LGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDL  198 (251)
T ss_dssp             ---------------------------------CHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTS
T ss_pred             ---------------------------------chhHHHHHHHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhc
Confidence                                             478999999999999999998  468899999999999999986654


Q ss_pred             C----------------CCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          263 G----------------SHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       263 ~----------------~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                      .                ..+|+|+|..+++|++ +...+++|+.+..||++.
T Consensus       199 ~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S-~~s~~itG~~i~vDGG~t  249 (251)
T d1zk4a1         199 PGAEEAMSQRTKTPMGHIGEPNDIAYICVYLAS-NESKFATGSEFVVDGGYT  249 (251)
T ss_dssp             TTHHHHHTSTTTCTTSSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGG
T ss_pred             CCHHHHHHHHhCCCCCCCcCHHHHHHHHHHHhC-chhCCCcCcEEEECcccc
Confidence            2                2479999999999997 778899999999999864

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=100.00  E-value=7.1e-46  Score=331.62  Aligned_cols=229  Identities=25%  Similarity=0.244  Sum_probs=206.8

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhC--CCceeEEEeeCCCHHHHHHHHHHHHhh
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEK--GLPVNFFQLDVSDPSSIEAFVSWFKSN  104 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dlt~~~~~~~~~~~~~~~  104 (302)
                      .++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.  +.++.++.+|++|+++++++++++.++
T Consensus         1 rl~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~   80 (258)
T d1iy8a_           1 RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTER   80 (258)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHH
Confidence            378999999999999999999999999999999999999999998888654  457889999999999999999999999


Q ss_pred             CCCccEEEEcCCCCCC--CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccc
Q 022103          105 FAALDILVNNAGVSFN--DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSI  182 (302)
Q Consensus       105 ~g~id~lv~~aG~~~~--~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~  182 (302)
                      ||++|+||||||+..+  ++.+++.++|++++++|+.++++++|+++|.|+++ ..|+||++||..+..+.+.       
T Consensus        81 ~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~-~~G~Ii~isS~~~~~~~~~-------  152 (258)
T d1iy8a_          81 FGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQ-GSGMVVNTASVGGIRGIGN-------  152 (258)
T ss_dssp             HSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEEEECCGGGTSBCSS-------
T ss_pred             hCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhh-cCCCCcccccHhhccCCCC-------
Confidence            9999999999997643  57889999999999999999999999999999887 6899999999998765432       


Q ss_pred             cchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC
Q 022103          183 LEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ  262 (302)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~  262 (302)
                                                         +.+|++||+|+++|+++||.|++++|||||+|+||+|+|+|....
T Consensus       153 -----------------------------------~~~Y~asKaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~  197 (258)
T d1iy8a_         153 -----------------------------------QSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENS  197 (258)
T ss_dssp             -----------------------------------BHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHH
T ss_pred             -----------------------------------chHHHHHHHHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHH
Confidence                                               478999999999999999999999999999999999999885321


Q ss_pred             -----------------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcccC
Q 022103          263 -----------------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVK  299 (302)
Q Consensus       263 -----------------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  299 (302)
                                             +..+|+|+|..+++|++ +...+++|+.+..||+..-
T Consensus       198 ~~~~~~~~~~~~~~~~~~~~pl~R~~~p~dvA~~v~fL~S-~~s~~itG~~i~VDGG~sa  256 (258)
T d1iy8a_         198 MKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVVAFLLS-DDASYVNATVVPIDGGQSA  256 (258)
T ss_dssp             HHHHCTTCHHHHHHHHHTTCTTCSCBCHHHHHHHHHHHTS-GGGTTCCSCEEEESTTTTT
T ss_pred             HhhcCcccHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC-chhcCCcCceEEcCcchhc
Confidence                                   23589999999999997 7889999999999998653

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=100.00  E-value=9.1e-46  Score=330.57  Aligned_cols=224  Identities=30%  Similarity=0.367  Sum_probs=205.0

Q ss_pred             CcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCcc
Q 022103           30 ETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALD  109 (302)
Q Consensus        30 ~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id  109 (302)
                      ||++|||||++|||+++|++|+++|++|++++|+.++++++.+++++.+.++.++.+|++|+++++++++++.++||+||
T Consensus         2 gKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iD   81 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVD   81 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence            79999999999999999999999999999999999999999999999888999999999999999999999999999999


Q ss_pred             EEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhh--hcCCCCCcEEEecCCCcccccccCcccccccchh
Q 022103          110 ILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLF--RRSPSKSRILNISSRLGTLSKVRNPNIKSILEDE  186 (302)
Q Consensus       110 ~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l--~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~  186 (302)
                      +||||||+... ++.+.+.++|++++++|+.++++++|+++|+|  .++ +.++||+++|..+..+.+.           
T Consensus        82 ilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~-~~g~Ii~i~S~~~~~~~~~-----------  149 (257)
T d2rhca1          82 VLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLER-GTGRIVNIASTGGKQGVVH-----------  149 (257)
T ss_dssp             EEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHH-TEEEEEEECCGGGTSCCTT-----------
T ss_pred             EEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhc-CCccccccccccccccccc-----------
Confidence            99999998755 68899999999999999999999999999974  444 5689999999998766433           


Q ss_pred             hhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC----
Q 022103          187 ELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ----  262 (302)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~----  262 (302)
                                                     +.+|++||+|+++|+++||.|++++|||||+|+||+|+|+|....    
T Consensus       150 -------------------------------~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~  198 (257)
T d2rhca1         150 -------------------------------AAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHY  198 (257)
T ss_dssp             -------------------------------CHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHHH
T ss_pred             -------------------------------chhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhhh
Confidence                                           478999999999999999999999999999999999999885321    


Q ss_pred             ----------------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          263 ----------------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       263 ----------------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                                            +..+|+|+|..+++|++ +...+++|+.+..+|+.
T Consensus       199 ~~~~~~~~~e~~~~~~~~~PlgR~~~pedia~~v~fL~S-~~s~~itG~~i~vDGG~  254 (257)
T d2rhca1         199 SDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIG-PGAAAVTAQALNVCGGL  254 (257)
T ss_dssp             HHHTTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHHHTS-GGGTTCCSCEEEESTTC
T ss_pred             hhhcccChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC-chhcCCcCceEEECcCc
Confidence                                  23589999999999997 78889999999999984

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=100.00  E-value=1.5e-45  Score=329.14  Aligned_cols=227  Identities=22%  Similarity=0.266  Sum_probs=205.3

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      .++||+++||||++|||+++|+.|+++|++|++++|+.+++++..+++   +.++.++.+|++|+++++++++++.+++|
T Consensus         2 ~L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~---~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g   78 (256)
T d1k2wa_           2 RLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEI---GPAACAIALDVTDQASIDRCVAELLDRWG   78 (256)
T ss_dssp             TTTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---CCceEEEEeeCCCHHHHHHHHHHHHHHhC
Confidence            589999999999999999999999999999999999999999988887   45789999999999999999999999999


Q ss_pred             CccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccch
Q 022103          107 ALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILED  185 (302)
Q Consensus       107 ~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~  185 (302)
                      ++|+||||||.... ++.+.+.++|++++++|+.++++++|+++|.|.+++..|+||++||..+..+.+           
T Consensus        79 ~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~-----------  147 (256)
T d1k2wa_          79 SIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGEA-----------  147 (256)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCT-----------
T ss_pred             CccEEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhccccc-----------
Confidence            99999999998755 688999999999999999999999999999876654679999999999876543           


Q ss_pred             hhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC---
Q 022103          186 EELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ---  262 (302)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~---  262 (302)
                                                     ++.+|++||+|+++|+++||.|++++|||||+|+||+++|+|+...   
T Consensus       148 -------------------------------~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~~~~~~~~  196 (256)
T d1k2wa_         148 -------------------------------LVGVYCATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEHWDGVDAK  196 (256)
T ss_dssp             -------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTHHHHHHH
T ss_pred             -------------------------------cccchhhhhhHHHHHHHHHHHHhcccCeEEEEEecCCCCchhhhhhhhh
Confidence                                           2478999999999999999999999999999999999999985321   


Q ss_pred             -----------------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcccC
Q 022103          263 -----------------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVK  299 (302)
Q Consensus       263 -----------------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  299 (302)
                                             +..+|+|+|..+++|++ +...+++|+.+..||+.+.
T Consensus       197 ~~~~~~~~~~~~~~~~~~~~PlgR~~~p~evA~~v~fL~S-~~a~~iTG~~i~vDGG~~m  255 (256)
T d1k2wa_         197 FADYENLPRGEKKRQVGAAVPFGRMGRAEDLTGMAIFLAT-PEADYIVAQTYNVDGGNWM  255 (256)
T ss_dssp             HHHHHTCCTTHHHHHHHHHSTTSSCBCHHHHHHHHHHTTS-GGGTTCCSCEEEESTTSSC
T ss_pred             hhhhccCChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC-chhCCccCceEEECcchhh
Confidence                                   23589999999999987 7888999999999998543

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=100.00  E-value=9.7e-46  Score=329.99  Aligned_cols=226  Identities=25%  Similarity=0.346  Sum_probs=204.4

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      +++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++   +.++.++.+|++++++++++++++.++||
T Consensus         2 dL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   78 (254)
T d1hdca_           2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL---GDAARYQHLDVTIEEDWQRVVAYAREEFG   78 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT---GGGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---CCceEEEEcccCCHHHHHHHHHHHHHHcC
Confidence            689999999999999999999999999999999999999888877766   45789999999999999999999999999


Q ss_pred             CccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccch
Q 022103          107 ALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILED  185 (302)
Q Consensus       107 ~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~  185 (302)
                      ++|+||||||.... ++.+.+.++|++++++|+.++++++|+++|.|+++ +.|+||++||..+..+.+           
T Consensus        79 ~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~-~~G~II~isS~~~~~~~~-----------  146 (254)
T d1hdca_          79 SVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDA-GGGSIVNISSAAGLMGLA-----------  146 (254)
T ss_dssp             CCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTSCCT-----------
T ss_pred             CccEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhc-CCCeecccccchhccccc-----------
Confidence            99999999998765 68899999999999999999999999999999987 579999999999876543           


Q ss_pred             hhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC---
Q 022103          186 EELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ---  262 (302)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~---  262 (302)
                                                     ++.+|++||+|+++|+++||.|++++|||||+|+||+|+|+|....   
T Consensus       147 -------------------------------~~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~v~T~~~~~~~~~  195 (254)
T d1hdca_         147 -------------------------------LTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIR  195 (254)
T ss_dssp             -------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTCC
T ss_pred             -------------------------------chhhHHHHHHHHHHHHHHHHHHhCCCceEEEEeeeCcccCccchhcCHH
Confidence                                           2478999999999999999999999999999999999999885432   


Q ss_pred             -----------C-C-CCHHHHHHHHHHHhhcCCCCCCCcceeecCCcccC
Q 022103          263 -----------G-S-HTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVK  299 (302)
Q Consensus       263 -----------~-~-~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  299 (302)
                                 + . ..|+|+|..+++|++ +...+++|+.+..||++..
T Consensus       196 ~~~~~~~~~pl~R~g~~PedvA~~v~fL~S-~~a~~itG~~i~vDGG~t~  244 (254)
T d1hdca_         196 QGEGNYPNTPMGRVGNEPGEIAGAVVKLLS-DTSSYVTGAELAVDGGWTT  244 (254)
T ss_dssp             CSTTSCTTSTTSSCB-CHHHHHHHHHHHHS-GGGTTCCSCEEEESTTTTT
T ss_pred             HHHHHHhCCCCCCCCCCHHHHHHHHHHHhc-hhhCCCCCceEEeCCCccC
Confidence                       1 1 369999999999997 7788999999999998643

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=100.00  E-value=1e-44  Score=325.59  Aligned_cols=230  Identities=21%  Similarity=0.269  Sum_probs=207.9

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      .++||+||||||++|||+++|++|+++|++|++++|+.++++++.+++...+ .+.++.+|++|+++++++++++.++||
T Consensus         3 rL~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g   81 (268)
T d2bgka1           3 RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPD-VISFVHCDVTKDEDVRNLVDTTIAKHG   81 (268)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTT-TEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCC-ceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            5899999999999999999999999999999999999999999999997644 678899999999999999999999999


Q ss_pred             CccEEEEcCCCCCC---CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCccccccc
Q 022103          107 ALDILVNNAGVSFN---DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSIL  183 (302)
Q Consensus       107 ~id~lv~~aG~~~~---~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~  183 (302)
                      ++|+||||||....   .+.+.+.++|+.++++|+.++++++|+++|+|.++ +.|+||+++|..+..+...        
T Consensus        82 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~-~~g~ii~iss~~~~~~~~~--------  152 (268)
T d2bgka1          82 KLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPA-KKGSIVFTASISSFTAGEG--------  152 (268)
T ss_dssp             CCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGG-TCEEEEEECCGGGTCCCTT--------
T ss_pred             CcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhc-CCCCccccccccccccccc--------
Confidence            99999999997643   36889999999999999999999999999999987 6799999999888754322        


Q ss_pred             chhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC-
Q 022103          184 EDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ-  262 (302)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~-  262 (302)
                                                       ....|++||+|+++|+++||.||+++|||||+|+||+|+|+|.++. 
T Consensus       153 ---------------------------------~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~  199 (268)
T d2bgka1         153 ---------------------------------VSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVF  199 (268)
T ss_dssp             ---------------------------------SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSS
T ss_pred             ---------------------------------cccccchhHHHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhh
Confidence                                             2257999999999999999999999999999999999999997754 


Q ss_pred             -------------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcccCC
Q 022103          263 -------------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVKS  300 (302)
Q Consensus       263 -------------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~  300 (302)
                                         +..+|||+|..+++|++ +...+++|+.+..||++...
T Consensus       200 ~~~~~~~~~~~~~~~~~~gr~~~pedvA~~v~fL~S-~~s~~itGq~i~VDGG~t~~  255 (268)
T d2bgka1         200 GVDSSRVEELAHQAANLKGTLLRAEDVADAVAYLAG-DESKYVSGLNLVIDGGYTRT  255 (268)
T ss_dssp             SCCHHHHHHHHHHTCSSCSCCCCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGGGC
T ss_pred             cCCHHHHHHHHHhccccCCCCcCHHHHHHHHHHHhC-hhhCCccCceEEECcCcccC
Confidence                               23679999999999997 67889999999999997654

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=1.3e-45  Score=327.31  Aligned_cols=225  Identities=25%  Similarity=0.389  Sum_probs=205.4

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHcCCEEEEE-ecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCcc
Q 022103           31 TIAIVTGANKGIGFALVKRLAELGLTVILT-ARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALD  109 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~G~~V~l~-~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id  109 (302)
                      |+||||||++|||+++|++|+++|++|++. .|+.+.++++.+++++.+.++.++.+|++|+++++++++++.+++|++|
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   81 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTID   81 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            689999999999999999999999999886 5677788999999988888999999999999999999999999999999


Q ss_pred             EEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhh
Q 022103          110 ILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEEL  188 (302)
Q Consensus       110 ~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~  188 (302)
                      +||||||.... ++.+.+.++|++++++|+.++++++|+++|+|.++ +.|+||++||..+..+.+.             
T Consensus        82 iLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~-~~G~IVnisS~~~~~~~~~-------------  147 (244)
T d1edoa_          82 VVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKK-RKGRIINIASVVGLIGNIG-------------  147 (244)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCTHHHHCCTT-------------
T ss_pred             ccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHc-CCcEEEEEcChhhcCCCCC-------------
Confidence            99999998755 68899999999999999999999999999999887 6799999999998766432             


Q ss_pred             cHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCCC-----
Q 022103          189 SEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQG-----  263 (302)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~~-----  263 (302)
                                                   +.+|++||+|+++|+++||.|++++|||||+|+||+|+|+|...+.     
T Consensus       148 -----------------------------~~~Y~asKaal~~ltk~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~  198 (244)
T d1edoa_         148 -----------------------------QANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGEDMEK  198 (244)
T ss_dssp             -----------------------------CHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCHHHHH
T ss_pred             -----------------------------CHHHHHHHHHHHHChHHHHHHHhhhCcEEEEEecceeccHHHHHhhHHHHH
Confidence                                         4789999999999999999999999999999999999999976542     


Q ss_pred             ----------CCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          264 ----------SHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       264 ----------~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                                ..+|+|+|..+.+|+..+...+++|+.+..+|++.
T Consensus       199 ~~~~~~pl~R~~~p~dvA~~v~fLa~S~~a~~itG~~i~vdGG~s  243 (244)
T d1edoa_         199 KILGTIPLGRTGQPENVAGLVEFLALSPAASYITGQAFTIDGGIA  243 (244)
T ss_dssp             HHHTSCTTCSCBCHHHHHHHHHHHHHCSGGGGCCSCEEEESTTTT
T ss_pred             HHHhcCCCCCCcCHHHHHHHHHHHHCCchhcCCcCCeEEeCCCee
Confidence                      36899999999999755888999999999999864

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=100.00  E-value=2.5e-45  Score=328.31  Aligned_cols=226  Identities=25%  Similarity=0.236  Sum_probs=206.9

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      .++||++|||||++|||+++|+.|+++|++|++++|+.++++++.+++++.+.++..+.+|++|+++++++++++.+++|
T Consensus         2 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   81 (260)
T d1zema1           2 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFG   81 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            47899999999999999999999999999999999999999999999998888999999999999999999999999999


Q ss_pred             CccEEEEcCCCCCC--CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccc
Q 022103          107 ALDILVNNAGVSFN--DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILE  184 (302)
Q Consensus       107 ~id~lv~~aG~~~~--~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~  184 (302)
                      ++|+||||||....  ++.+.+.++|++++++|+.++++++|+++|.|.++ ..|+||++||..+..+.+          
T Consensus        82 ~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~-~~G~II~isS~~~~~~~~----------  150 (260)
T d1zema1          82 KIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQ-NYGRIVNTASMAGVKGPP----------  150 (260)
T ss_dssp             CCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCHHHHSCCT----------
T ss_pred             CCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhh-cCCCCCeeechhhccCCc----------
Confidence            99999999997643  68899999999999999999999999999999887 679999999998876533          


Q ss_pred             hhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCC---
Q 022103          185 DEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG---  261 (302)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~---  261 (302)
                                                      ++.+|++||+|+++|+++||.|++++|||||+|+||+|+|+|...   
T Consensus       151 --------------------------------~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~  198 (260)
T d1zema1         151 --------------------------------NMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQV  198 (260)
T ss_dssp             --------------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHH
T ss_pred             --------------------------------chHHHHHHHHHHHHHHHHHHHHhhhhCCEEEEeccCcccCcchhhcch
Confidence                                            247899999999999999999999999999999999999987421   


Q ss_pred             ---------------------------C-CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCc
Q 022103          262 ---------------------------Q-GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDP  296 (302)
Q Consensus       262 ---------------------------~-~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  296 (302)
                                                 + +..+|+|+|..+++|++ +...+++|+.+..||+
T Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pedvA~~v~fL~S-~~s~~itG~~i~VDGG  260 (260)
T d1zema1         199 ELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINEIPGVVAFLLG-DDSSFMTGVNLPIAGG  260 (260)
T ss_dssp             HHHHHHTCTTSCSSHHHHHHHHHHTSTTSSCBCGGGSHHHHHHHHS-GGGTTCCSCEEEESCC
T ss_pred             hhhhhhcccccccCHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC-chhcCccCCeEEeCCC
Confidence                                       0 12579999999999997 7889999999999874

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=1.5e-44  Score=320.14  Aligned_cols=224  Identities=25%  Similarity=0.262  Sum_probs=199.6

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      +.++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++     +..++.+|++|+++++++++++.+++
T Consensus         1 M~L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~-----~~~~~~~Dv~~~~~v~~~~~~~~~~~   75 (242)
T d1ulsa_           1 MRLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV-----GAHPVVMDVADPASVERGFAEALAHL   75 (242)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-----TCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-----CCeEEEEecCCHHHHHHHHHHHHHhc
Confidence            3589999999999999999999999999999999999999888877755     46789999999999999999999999


Q ss_pred             CCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccc
Q 022103          106 AALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILE  184 (302)
Q Consensus       106 g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~  184 (302)
                      |++|+||||||+... ++.+.+.++|++++++|+.++++++|+++|.|.++ ..++++++||. +..+.           
T Consensus        76 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~-~~~~i~~~ss~-~~~~~-----------  142 (242)
T d1ulsa_          76 GRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREK-NPGSIVLTASR-VYLGN-----------  142 (242)
T ss_dssp             SSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-CCEEEEEECCG-GGGCC-----------
T ss_pred             CCceEEEECCcccccCchhhCcchhhhccccccchhhhhhhhhcccccccc-ccceeeeeccc-cccCC-----------
Confidence            999999999998765 67899999999999999999999999999999887 56677776663 33332           


Q ss_pred             hhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCCC-
Q 022103          185 DEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQG-  263 (302)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~~-  263 (302)
                                                     +++.+|++||+|+++|+++||.|++++|||||+|+||+|+|+|..... 
T Consensus       143 -------------------------------~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~  191 (242)
T d1ulsa_         143 -------------------------------LGQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVPE  191 (242)
T ss_dssp             -------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSCH
T ss_pred             -------------------------------CCCcchHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCcccChhhhcCCH
Confidence                                           234789999999999999999999999999999999999999987652 


Q ss_pred             --------------CCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcccC
Q 022103          264 --------------SHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVK  299 (302)
Q Consensus       264 --------------~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  299 (302)
                                    ..+|+|+|..+.+|++ +...+++|+.+..||+...
T Consensus       192 ~~~~~~~~~~pl~R~~~pedia~~v~fL~S-~~s~~itG~~i~vDGG~t~  240 (242)
T d1ulsa_         192 KVREKAIAATPLGRAGKPLEVAYAALFLLS-DESSFITGQVLFVDGGRTI  240 (242)
T ss_dssp             HHHHHHHHTCTTCSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTTTT
T ss_pred             HHHHHHHhcCCCCCCCCHHHHHHHHHHHhc-hhhCCCCCcEEEECCCccC
Confidence                          2589999999999997 6788999999999998754

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=100.00  E-value=2.3e-44  Score=318.54  Aligned_cols=223  Identities=22%  Similarity=0.272  Sum_probs=200.0

Q ss_pred             CcEEEEeCCCchHHHHHHHHHHHcCCE-------EEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHH
Q 022103           30 ETIAIVTGANKGIGFALVKRLAELGLT-------VILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFK  102 (302)
Q Consensus        30 ~k~vlItGas~gIG~ala~~l~~~G~~-------V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~  102 (302)
                      +++||||||++|||+++|++|+++|++       |++.+|+.++++++.+++++.+.++.++.+|++|+++++++++++.
T Consensus         1 K~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~   80 (240)
T d2bd0a1           1 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIV   80 (240)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHH
Confidence            357999999999999999999999997       9999999999999999999988899999999999999999999999


Q ss_pred             hhCCCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCccccc
Q 022103          103 SNFAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKS  181 (302)
Q Consensus       103 ~~~g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~  181 (302)
                      ++||++|+||||||.... ++.+.+.++|++++++|+.|+++++|+++|+|+++ +.|+||++||..+..+.+       
T Consensus        81 ~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~-~~G~Ii~isS~~~~~~~~-------  152 (240)
T d2bd0a1          81 ERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQ-HSGHIFFITSVAATKAFR-------  152 (240)
T ss_dssp             HHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTSCCT-------
T ss_pred             HHcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhc-CCCceEEEechhhcCCCC-------
Confidence            999999999999998755 68899999999999999999999999999999987 579999999999876643       


Q ss_pred             ccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCC
Q 022103          182 ILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG  261 (302)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~  261 (302)
                                                         ++.+|++||+|+++|+++|+.|++++|||||+|+||+|+|+|+..
T Consensus       153 -----------------------------------~~~~Y~asK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~~  197 (240)
T d2bd0a1         153 -----------------------------------HSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGK  197 (240)
T ss_dssp             -----------------------------------TCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCC
T ss_pred             -----------------------------------CChHHHHHHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhhh
Confidence                                               247899999999999999999999999999999999999999876


Q ss_pred             CCC------CCHHHHHHHHHHHhhcCCCCCCCcceee-cCCc
Q 022103          262 QGS------HTADEAADVGARLLLLHPQQLPTAKFYI-GLDP  296 (302)
Q Consensus       262 ~~~------~~~~~~a~~~~~l~~~~~~~~~~G~~~~-~~~~  296 (302)
                      ...      .+|+++|..+++++.. +..+..|.+.+ ..++
T Consensus       198 ~~~~~~~~~~~PedvA~~v~~l~s~-~~~~~~~~~~i~p~~G  238 (240)
T d2bd0a1         198 VDDEMQALMMMPEDIAAPVVQAYLQ-PSRTVVEEIILRPTSG  238 (240)
T ss_dssp             CCSTTGGGSBCHHHHHHHHHHHHTS-CTTEEEEEEEEEETTC
T ss_pred             cCHhhHhcCCCHHHHHHHHHHHHcC-CccCccCCEEEEecCC
Confidence            533      6799999999999984 44555555443 4443

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.2e-45  Score=325.13  Aligned_cols=225  Identities=24%  Similarity=0.303  Sum_probs=201.4

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      .++||++|||||++|||+++|+.|+++|++|++++|+.++++++.+++.    ++.++.+|++|+++++++++++.++||
T Consensus         3 rl~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~----~~~~~~~Dvs~~~~v~~~~~~~~~~~g   78 (250)
T d1ydea1           3 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELP----GAVFILCDVTQEDDVKTLVSETIRRFG   78 (250)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCT----TEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcC----CCeEEEccCCCHHHHHHHHHHHHHhcC
Confidence            5799999999999999999999999999999999999988887777653    578999999999999999999999999


Q ss_pred             CccEEEEcCCCCCC--CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccc
Q 022103          107 ALDILVNNAGVSFN--DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILE  184 (302)
Q Consensus       107 ~id~lv~~aG~~~~--~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~  184 (302)
                      ++|+||||||....  ++.+.+.++|++++++|+.++++++|+++|+|+++  .|+||++||..+..+.+          
T Consensus        79 ~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~--~G~Ii~isS~~~~~~~~----------  146 (250)
T d1ydea1          79 RLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS--QGNVINISSLVGAIGQA----------  146 (250)
T ss_dssp             CCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEECCHHHHHCCT----------
T ss_pred             CCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhC--CCCCccccccccccccc----------
Confidence            99999999997543  56789999999999999999999999999999875  59999999998876533          


Q ss_pred             hhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC--
Q 022103          185 DEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ--  262 (302)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~--  262 (302)
                                                      ++.+|+++|+|+++|+++||.|++++|||||+|+||+|+|+|.+..  
T Consensus       147 --------------------------------~~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~  194 (250)
T d1ydea1         147 --------------------------------QAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAA  194 (250)
T ss_dssp             --------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHT
T ss_pred             --------------------------------CcchhHHHHhhHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHHhh
Confidence                                            2478999999999999999999999999999999999999885421  


Q ss_pred             -------------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcccCCC
Q 022103          263 -------------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVKSN  301 (302)
Q Consensus       263 -------------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~~  301 (302)
                                         +..+|+|+|..+++|++ + ..+++|+.+..||+...++
T Consensus       195 ~~~~~~~~~~~~~~~~pl~R~g~p~eva~~v~fL~S-d-a~~itG~~i~vDGG~~lG~  250 (250)
T d1ydea1         195 LMPDPRASIREGMLAQPLGRMGQPAEVGAAAVFLAS-E-ANFCTGIELLVTGGAELGY  250 (250)
T ss_dssp             TSSSHHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHH-H-CTTCCSCEEEESTTTTSCC
T ss_pred             cCCCHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhC-c-cCCCcCCeEEECCCcccCC
Confidence                               23589999999999987 4 6789999999999977653

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=1.3e-44  Score=321.53  Aligned_cols=222  Identities=23%  Similarity=0.226  Sum_probs=197.9

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      ++||++|||||++|||+++|+.|+++|++|++++|+.+.++ ..+++     ...++++|++|+++++++++++.++||+
T Consensus         3 l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~-~~~~~-----~~~~~~~Dv~~~~~v~~~~~~~~~~~G~   76 (248)
T d2d1ya1           3 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKE-VAEAI-----GGAFFQVDLEDERERVRFVEEAAYALGR   76 (248)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHH-HHHHH-----TCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHc-----CCeEEEEeCCCHHHHHHHHHHHHHhcCC
Confidence            78999999999999999999999999999999999986543 44444     2467899999999999999999999999


Q ss_pred             ccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchh
Q 022103          108 LDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDE  186 (302)
Q Consensus       108 id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~  186 (302)
                      ||+||||||...+ ++.+.+.++|++++++|+.++++++|+++|+|+++ +.|+||+++|..+..+.+.           
T Consensus        77 iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~-~~G~Ii~isS~~~~~~~~~-----------  144 (248)
T d2d1ya1          77 VDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKV-GGGAIVNVASVQGLFAEQE-----------  144 (248)
T ss_dssp             CCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTT-TCEEEEEECCGGGTSBCTT-----------
T ss_pred             CCeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhccccccc-ccccccccccccccccccc-----------
Confidence            9999999998755 68999999999999999999999999999999987 5799999999998766432           


Q ss_pred             hhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC----
Q 022103          187 ELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ----  262 (302)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~----  262 (302)
                                                     +.+|+++|+|+++|+++||.|++++|||||+|+||+|+|+|....    
T Consensus       145 -------------------------------~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~  193 (248)
T d2d1ya1         145 -------------------------------NAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALS  193 (248)
T ss_dssp             -------------------------------BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--
T ss_pred             -------------------------------cchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCchHHHHhhcC
Confidence                                           478999999999999999999999999999999999999874321    


Q ss_pred             -----------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcccC
Q 022103          263 -----------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVK  299 (302)
Q Consensus       263 -----------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  299 (302)
                                       +..+|+|+|..+.+|++ +...+++|+.+..||+...
T Consensus       194 ~~~~~~~~~~~~~~pl~R~~~pedia~~v~fL~S-~~s~~itG~~i~vDGG~ta  246 (248)
T d2d1ya1         194 PDPERTRRDWEDLHALRRLGKPEEVAEAVLFLAS-EKASFITGAILPVDGGMTA  246 (248)
T ss_dssp             ------CHHHHTTSTTSSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGGG
T ss_pred             CCHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC-chhcCCCCcEEEcCcCccc
Confidence                             12579999999999997 7888999999999998753

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=100.00  E-value=1.3e-44  Score=323.57  Aligned_cols=241  Identities=22%  Similarity=0.242  Sum_probs=210.6

Q ss_pred             ccccccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhh-CCCceeEEEeeCCCHHHHHHHHHH
Q 022103           22 SSTKWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSE-KGLPVNFFQLDVSDPSSIEAFVSW  100 (302)
Q Consensus        22 ~~~~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dlt~~~~~~~~~~~  100 (302)
                      |.++++++||+||||||++|||+++|++|+++|++|++++|+.+++++..+++.+ .+.++.++.+|+++++++++++++
T Consensus         1 p~~~m~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~   80 (260)
T d1h5qa_           1 PGFTISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQ   80 (260)
T ss_dssp             CCEEECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCcccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHH
Confidence            4567889999999999999999999999999999999999999999888887754 467899999999999999999999


Q ss_pred             HHhhCCCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCccc
Q 022103          101 FKSNFAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNI  179 (302)
Q Consensus       101 ~~~~~g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~  179 (302)
                      +.+++|++|+||||||.... ++.+.+.++|++++++|+.++++++|++.|+|.++...++|++++|...........  
T Consensus        81 ~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~~--  158 (260)
T d1h5qa_          81 IDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSL--  158 (260)
T ss_dssp             HHHHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEET--
T ss_pred             HHHHhCCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeecccccccccccc--
Confidence            99999999999999998755 688999999999999999999999999999997665678888888876654332110  


Q ss_pred             ccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCC
Q 022103          180 KSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMT  259 (302)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~  259 (302)
                                                       ...++..+|+++|+|+++|+++||.|++++|||||+|+||+|+|+|.
T Consensus       159 ---------------------------------~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~  205 (260)
T d1h5qa_         159 ---------------------------------NGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQT  205 (260)
T ss_dssp             ---------------------------------TEECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGG
T ss_pred             ---------------------------------ccCccccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcch
Confidence                                             00123478999999999999999999999999999999999999997


Q ss_pred             CCCC---------------CCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          260 QGQG---------------SHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       260 ~~~~---------------~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                      ....               ..+|+|+|..+++|++ +...+++|+.+..||+..
T Consensus       206 ~~~~~~~~~~~~~~~pl~R~g~pedvA~~v~fL~S-~~s~~itG~~i~VDGG~~  258 (260)
T d1h5qa_         206 AHMDKKIRDHQASNIPLNRFAQPEEMTGQAILLLS-DHATYMTGGEYFIDGGQL  258 (260)
T ss_dssp             GGSCHHHHHHHHHTCTTSSCBCGGGGHHHHHHHHS-GGGTTCCSCEEEECTTGG
T ss_pred             hccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhc-chhCCCcCceEEECCCee
Confidence            6542               3579999999999997 788899999999999853

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=100.00  E-value=7.3e-44  Score=318.51  Aligned_cols=230  Identities=30%  Similarity=0.364  Sum_probs=207.0

Q ss_pred             cccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhh
Q 022103           25 KWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSN  104 (302)
Q Consensus        25 ~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~  104 (302)
                      .|+++||+||||||++|||+++|++|+++|++|++++|+.++++++.+++.+.+.++.++.+|++++++++++++++.++
T Consensus         1 ~f~L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~   80 (258)
T d1ae1a_           1 RWSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHV   80 (258)
T ss_dssp             CCCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHH
Confidence            47899999999999999999999999999999999999999999999999999889999999999999999999999999


Q ss_pred             C-CCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccc
Q 022103          105 F-AALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSI  182 (302)
Q Consensus       105 ~-g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~  182 (302)
                      + +.+|+||||||.... ++.+.+.++|++++++|+.++++++++++|.|.++ ..|+||++||..+..+.+        
T Consensus        81 ~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~-~~g~ii~isS~~~~~~~~--------  151 (258)
T d1ae1a_          81 FDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKAS-QNGNVIFLSSIAGFSALP--------  151 (258)
T ss_dssp             TTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TSEEEEEECCGGGTSCCT--------
T ss_pred             hCCCcEEEeccccccccCccccCCHHHHhhhhhhccccccccccccccccccc-cccccccccccccccccc--------
Confidence            8 689999999998755 68899999999999999999999999999999988 689999999999876533        


Q ss_pred             cchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC
Q 022103          183 LEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ  262 (302)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~  262 (302)
                                                        .+..|+++|+|+++|++.||+|++++|||||+|+||+++|+|....
T Consensus       152 ----------------------------------~~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~  197 (258)
T d1ae1a_         152 ----------------------------------SVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETA  197 (258)
T ss_dssp             ----------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------
T ss_pred             ----------------------------------cchhHHHHHHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhh
Confidence                                              3478999999999999999999999999999999999999997654


Q ss_pred             C---------------------CCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          263 G---------------------SHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       263 ~---------------------~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                      .                     ..+|+|+|..+++|++ +...+++|+.+..||++.
T Consensus       198 ~~~~~~~~~~~~~~~~~~plgR~~~pediA~~v~fL~S-~~s~~itG~~i~vDGG~s  253 (258)
T d1ae1a_         198 IKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFLCF-PAASYITGQIIWADGGFT  253 (258)
T ss_dssp             ------CHHHHHHHHHHSTTCSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGG
T ss_pred             hhhhhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC-hhhCCCcCcEEEeCCCee
Confidence            1                     2589999999999997 678899999999999864

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=6.8e-45  Score=321.38  Aligned_cols=217  Identities=24%  Similarity=0.269  Sum_probs=191.9

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      ++++||++|||||++|||+++|++|+++|++|++++|+.+.+           .++..+.+|++|+++++++++++.+++
T Consensus         3 psl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~-----------~~~~~~~~Dv~~~~~v~~~~~~~~~~~   71 (237)
T d1uzma1           3 PPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAP-----------KGLFGVEVDVTDSDAVDRAFTAVEEHQ   71 (237)
T ss_dssp             CCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCC-----------TTSEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchh-----------cCceEEEEecCCHHHHHHHHHHHHHhc
Confidence            568999999999999999999999999999999999987542           367889999999999999999999999


Q ss_pred             CCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccc
Q 022103          106 AALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILE  184 (302)
Q Consensus       106 g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~  184 (302)
                      |++|+||||||+..+ ++.+.+.++|++++++|+.++++++|+++|+|.++ +.++||++||..+..+.+          
T Consensus        72 g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~-~~g~Iv~isS~~~~~~~~----------  140 (237)
T d1uzma1          72 GPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRN-KFGRMIFIGSVSGLWGIG----------  140 (237)
T ss_dssp             SSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEEECCCCC---------------
T ss_pred             CCceEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhccccc-CCCceEEEcchhhccCCc----------
Confidence            999999999998755 68899999999999999999999999999999998 678999999999876543          


Q ss_pred             hhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC--
Q 022103          185 DEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ--  262 (302)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~--  262 (302)
                                                      ++.+|++||+|+++|+++||.|++++|||||+|+||+|+|+|.+..  
T Consensus       141 --------------------------------~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~  188 (237)
T d1uzma1         141 --------------------------------NQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALDE  188 (237)
T ss_dssp             --------------------------------CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHSCH
T ss_pred             --------------------------------ccHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeeeCcCCChhhhccCH
Confidence                                            2478999999999999999999999999999999999999986543  


Q ss_pred             -------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          263 -------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       263 -------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                                   +..+|||+|..+++|++ +...+++|+.+..+|+.
T Consensus       189 ~~~~~~~~~~pl~R~~~pedvA~~v~fL~S-~~s~~itG~~i~vdGG~  235 (237)
T d1uzma1         189 RIQQGALQFIPAKRVGTPAEVAGVVSFLAS-EDASYISGAVIPVDGGM  235 (237)
T ss_dssp             HHHHHHGGGCTTCSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTT
T ss_pred             HHHHHHHhcCCCCCCcCHHHHHHHHHHHhC-chhcCCcCCeEEECCCC
Confidence                         23689999999999997 67889999999999974

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=100.00  E-value=2.9e-44  Score=320.24  Aligned_cols=224  Identities=22%  Similarity=0.259  Sum_probs=202.0

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      .++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++.   .+..++.+|++|+++++++++++.+++|
T Consensus         3 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~~~~~~~~~~~~~g   79 (253)
T d1hxha_           3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELG---ERSMFVRHDVSSEADWTLVMAAVQRRLG   79 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHC---TTEEEECCCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhC---CCeEEEEeecCCHHHHHHHHHHHHHHhC
Confidence            4899999999999999999999999999999999999999999888874   4788999999999999999999999999


Q ss_pred             CccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccch
Q 022103          107 ALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILED  185 (302)
Q Consensus       107 ~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~  185 (302)
                      ++|+||||||...+ ++.+.+.++|++++++|+.++++++|+++|+|+++  .|+||++||..+..+.+           
T Consensus        80 ~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~--~G~Iv~isS~~~~~~~~-----------  146 (253)
T d1hxha_          80 TLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKET--GGSIINMASVSSWLPIE-----------  146 (253)
T ss_dssp             SCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT--CEEEEEECCGGGTSCCT-----------
T ss_pred             CCCeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhc--CCceecccchhhhcCcc-----------
Confidence            99999999998765 68899999999999999999999999999999764  59999999999876543           


Q ss_pred             hhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccC--CCcEEEEeecCcccCCCCCCC-
Q 022103          186 EELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEG--EGISVNSYCPGFTQTSMTQGQ-  262 (302)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~--~gI~V~~v~PG~v~T~~~~~~-  262 (302)
                                                     .+.+|++||+|+++|++++|.|+++  +|||||+|+||+|+|+|.+.. 
T Consensus       147 -------------------------------~~~~Y~asKaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~~~~  195 (253)
T d1hxha_         147 -------------------------------QYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASL  195 (253)
T ss_dssp             -------------------------------TBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHS
T ss_pred             -------------------------------ccccccchhHHHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHhHHhhC
Confidence                                           2478999999999999999999986  469999999999999875321 


Q ss_pred             -------------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          263 -------------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       263 -------------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                                         +..+|+|+|..+++|++ +...+++|+.+..||.++
T Consensus       196 ~~~~~~~~~~~~~~~~~~gr~~~pedvA~~v~fL~S-~~s~~itG~~i~VDGG~~  249 (253)
T d1hxha_         196 PKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLAS-DESSVMSGSELHADNSIL  249 (253)
T ss_dssp             CTTCCHHHHBCBTTTBTTCCEECHHHHHHHHHHHHS-GGGTTCCSCEEEESSSCT
T ss_pred             cchhhHHHHHhCccccccCCCCCHHHHHHHHHHHhC-hhhCCCcCcEEEECccHh
Confidence                               12469999999999997 788899999999999864

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=8.4e-44  Score=318.96  Aligned_cols=228  Identities=27%  Similarity=0.317  Sum_probs=194.2

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCC---CceeEEEeeCCCHHHHHHHHHHHHh
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKG---LPVNFFQLDVSDPSSIEAFVSWFKS  103 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dlt~~~~~~~~~~~~~~  103 (302)
                      .++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+.+   .++.++.+|++++++++++++++.+
T Consensus         2 rl~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (264)
T d1spxa_           2 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG   81 (264)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHH
Confidence            4789999999999999999999999999999999999999999999998764   3588999999999999999999999


Q ss_pred             hCCCccEEEEcCCCCCC-----CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCc-ccccccCc
Q 022103          104 NFAALDILVNNAGVSFN-----DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLG-TLSKVRNP  177 (302)
Q Consensus       104 ~~g~id~lv~~aG~~~~-----~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~-~~~~~~~~  177 (302)
                      ++|++|+||||||...+     .+.+.+.++|+.++++|+.++++++|+++|+|+++  .+++|+++|..+ ..+.    
T Consensus        82 ~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~--~g~iI~~~S~~~~~~~~----  155 (264)
T d1spxa_          82 KFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSST--KGEIVNISSIASGLHAT----  155 (264)
T ss_dssp             HHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEECCTTSSSSCC----
T ss_pred             HhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccccc--cCcceeeeeeccccccC----
Confidence            99999999999997532     35667999999999999999999999999999876  577777777654 4332    


Q ss_pred             ccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCC
Q 022103          178 NIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTS  257 (302)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~  257 (302)
                                                            +.+.+|++||+|+++|+++||.|++++|||||+|+||+|+|+
T Consensus       156 --------------------------------------~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~  197 (264)
T d1spxa_         156 --------------------------------------PDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATG  197 (264)
T ss_dssp             --------------------------------------TTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCC
T ss_pred             --------------------------------------CCchhhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCc
Confidence                                                  224779999999999999999999999999999999999999


Q ss_pred             CCCCCC------------------------CCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          258 MTQGQG------------------------SHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       258 ~~~~~~------------------------~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                      |.....                        ..+|+|+|+.+++|++.+...+++|+.+..||+..
T Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pedvA~~v~fL~S~~~s~~itG~~i~vDGG~s  262 (264)
T d1spxa_         198 FGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGSS  262 (264)
T ss_dssp             C--------------HHHHHHHHHHCTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGG
T ss_pred             chhccCCcHHHHHHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCCcccCCccCceEEeCCChh
Confidence            976431                        24799999999999974457889999999999864

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-43  Score=314.57  Aligned_cols=223  Identities=22%  Similarity=0.213  Sum_probs=197.6

Q ss_pred             cccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhh
Q 022103           25 KWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSN  104 (302)
Q Consensus        25 ~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~  104 (302)
                      ...++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++.    .+..+.+|++|+++++++++    +
T Consensus         2 ~~~L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~----~~~~~~~Dv~d~~~v~~~~~----~   73 (244)
T d1pr9a_           2 ELFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP----GIEPVCVDLGDWEATERALG----S   73 (244)
T ss_dssp             CCCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST----TCEEEECCTTCHHHHHHHHT----T
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcC----CCeEEEEeCCCHHHHHHHHH----H
Confidence            356899999999999999999999999999999999999999888887764    57889999999999877664    5


Q ss_pred             CCCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCccccccc
Q 022103          105 FAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSIL  183 (302)
Q Consensus       105 ~g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~  183 (302)
                      +|++|+||||||.... ++.+.+.++|++++++|+.++++++++++|.|.++...|+||+++|..+..+.+         
T Consensus        74 ~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~---------  144 (244)
T d1pr9a_          74 VGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVT---------  144 (244)
T ss_dssp             CCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCT---------
T ss_pred             hCCceEEEeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeeccccccccccc---------
Confidence            7999999999998755 688999999999999999999999999999765544679999999998875533         


Q ss_pred             chhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC-
Q 022103          184 EDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ-  262 (302)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~-  262 (302)
                                                       .+.+|++||+|+++|+++||.|++++|||||+|+||+|+|+|.+.. 
T Consensus       145 ---------------------------------~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~  191 (244)
T d1pr9a_         145 ---------------------------------NHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATW  191 (244)
T ss_dssp             ---------------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTTS
T ss_pred             ---------------------------------chhhhhhhHHHHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhhc
Confidence                                             2478999999999999999999999999999999999999986543 


Q ss_pred             ----------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          263 ----------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       263 ----------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                                      +..+|+|+|+.+++|++ +...+++|+.+..||++.
T Consensus       192 ~~~~~~~~~~~~~pl~R~~~peevA~~v~fL~S-~~a~~itG~~i~vDGG~~  242 (244)
T d1pr9a_         192 SDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLS-DRSGMTTGSTLPVEGGFW  242 (244)
T ss_dssp             CSHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGG
T ss_pred             cChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC-chhCCcCCcEEEECccHh
Confidence                            12579999999999997 788999999999999864

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=5e-44  Score=316.72  Aligned_cols=223  Identities=20%  Similarity=0.172  Sum_probs=197.4

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      ++++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.    .+..+.+|++|+++++++++    ++
T Consensus         1 mdl~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~----~~~~~~~Dv~~~~~v~~~~~----~~   72 (242)
T d1cyda_           1 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECP----GIEPVCVDLGDWDATEKALG----GI   72 (242)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST----TCEEEECCTTCHHHHHHHHT----TC
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcC----CCeEEEEeCCCHHHHHHHHH----Hc
Confidence            46899999999999999999999999999999999999998888877664    57889999999999876654    67


Q ss_pred             CCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccc
Q 022103          106 AALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILE  184 (302)
Q Consensus       106 g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~  184 (302)
                      |++|+||||||.... ++.+.+.++|+.++++|+.++++++|++.|.|.+++..|+||+++|..+..+.+          
T Consensus        73 g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~----------  142 (242)
T d1cyda_          73 GPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFP----------  142 (242)
T ss_dssp             CCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCT----------
T ss_pred             CCCeEEEECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccccCC----------
Confidence            999999999998755 689999999999999999999999999999876654679999999988775533          


Q ss_pred             hhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC--
Q 022103          185 DEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ--  262 (302)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~--  262 (302)
                                                      ++.+|+++|+|+++|+++||.|++++|||||+|+||+|+|+|....  
T Consensus       143 --------------------------------~~~~Y~asKaal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~  190 (242)
T d1cyda_         143 --------------------------------NLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSA  190 (242)
T ss_dssp             --------------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTC
T ss_pred             --------------------------------ccccccchHHHHHHHHHHHHHHhCccCeecccCCCCCccCHHHHhhcC
Confidence                                            2478999999999999999999999999999999999999985532  


Q ss_pred             ---------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcccC
Q 022103          263 ---------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVK  299 (302)
Q Consensus       263 ---------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~  299 (302)
                                     +..+|+|+|..+++|++ +...+++|+.+..||++.-
T Consensus       191 ~~~~~~~~~~~~pl~R~~~peeva~~v~fL~S-~~s~~itG~~i~vDGG~~a  241 (242)
T d1cyda_         191 DPEFARKLKERHPLRKFAEVEDVVNSILFLLS-DRSASTSGGGILVDAGYLA  241 (242)
T ss_dssp             CHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHS-GGGTTCCSSEEEESTTGGG
T ss_pred             CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC-chhcCcCCceEEeCcchhc
Confidence                           23679999999999997 6788999999999998753

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=1.2e-43  Score=319.63  Aligned_cols=229  Identities=22%  Similarity=0.250  Sum_probs=202.3

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCC---CceeEEEeeCCCHHHHHHHHHHHHh
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKG---LPVNFFQLDVSDPSSIEAFVSWFKS  103 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dlt~~~~~~~~~~~~~~  103 (302)
                      .++||+++||||++|||+++|+.|+++|++|++++|+.++++++.+++.+.+   .++..+.+|++|+++++++++++.+
T Consensus         1 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   80 (274)
T d1xhla_           1 RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLA   80 (274)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHH
Confidence            3789999999999999999999999999999999999999999999998765   3678999999999999999999999


Q ss_pred             hCCCccEEEEcCCCCCC---CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccc
Q 022103          104 NFAALDILVNNAGVSFN---DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIK  180 (302)
Q Consensus       104 ~~g~id~lv~~aG~~~~---~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~  180 (302)
                      +||++|++|||||....   ...+.+.++|++++++|+.++++++|+++|+|.++ ..++|+++||..+..+.+      
T Consensus        81 ~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~-~~g~ii~~ss~~~~~~~~------  153 (274)
T d1xhla_          81 KFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKT-KGEIVNVSSIVAGPQAHS------  153 (274)
T ss_dssp             HHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEECCGGGSSSCCT------
T ss_pred             HcCCceEEEeecccccccccccccCCHHHHHHHHhhccccccccccccccccccc-ccccccchhhhhccccCC------
Confidence            99999999999997533   34567889999999999999999999999999987 578888888877664432      


Q ss_pred             cccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCC
Q 022103          181 SILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ  260 (302)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~  260 (302)
                                                          ++.+|++||+|+++|+|+||.|++++|||||+|+||+|+|+|..
T Consensus       154 ------------------------------------~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~  197 (274)
T d1xhla_         154 ------------------------------------GYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMG  197 (274)
T ss_dssp             ------------------------------------TSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHH
T ss_pred             ------------------------------------CCceehhhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhh
Confidence                                                34789999999999999999999999999999999999999743


Q ss_pred             CC------------------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          261 GQ------------------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       261 ~~------------------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                      ..                        +..+|+|+|..+++|++.+...+++|+.+..||+..
T Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~iPlgR~g~pediA~~v~fL~S~d~s~~itG~~i~vDGG~~  259 (274)
T d1xhla_         198 AMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIANIIVFLADRNLSSYIIGQSIVADGGST  259 (274)
T ss_dssp             HTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGG
T ss_pred             hhcccchhhHHHHHHHHHHHcCCCCCCCcCHHHHHHHHHHHcCCccccCccCcEEEeCcCHH
Confidence            22                        125799999999999963357789999999999864

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=1.2e-43  Score=319.26  Aligned_cols=228  Identities=24%  Similarity=0.289  Sum_probs=198.6

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCC---CceeEEEeeCCCHHHHHHHHHHHHh
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKG---LPVNFFQLDVSDPSSIEAFVSWFKS  103 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dlt~~~~~~~~~~~~~~  103 (302)
                      .++||++|||||++|||+++|+.|+++|++|++++|+.++++++.+++.+.+   .++.++.+|++|+++++++++++.+
T Consensus         2 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~   81 (272)
T d1xkqa_           2 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLK   81 (272)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            5899999999999999999999999999999999999999999999998764   3688999999999999999999999


Q ss_pred             hCCCccEEEEcCCCCCC-C----CCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCC-CcccccccCc
Q 022103          104 NFAALDILVNNAGVSFN-D----IYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSR-LGTLSKVRNP  177 (302)
Q Consensus       104 ~~g~id~lv~~aG~~~~-~----~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~-~~~~~~~~~~  177 (302)
                      +||++|+||||||...+ +    ..+.+.++|++++++|+.++++++|+++|+|+++  .+++|+++|. ++..+.+   
T Consensus        82 ~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~--~g~iI~~~Ss~a~~~~~~---  156 (272)
T d1xkqa_          82 QFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVAS--KGEIVNVSSIVAGPQAQP---  156 (272)
T ss_dssp             HHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEECCGGGSSSCCC---
T ss_pred             HhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhccccccc--CCccccccchhccccCCC---
Confidence            99999999999998654 2    3467788999999999999999999999999875  4666666664 4554432   


Q ss_pred             ccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCC
Q 022103          178 NIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTS  257 (302)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~  257 (302)
                                                             ++.+|++||+|+++|+++||.|++++|||||+|+||+|+|+
T Consensus       157 ---------------------------------------~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~  197 (272)
T d1xkqa_         157 ---------------------------------------DFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETG  197 (272)
T ss_dssp             ---------------------------------------SSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSS
T ss_pred             ---------------------------------------CcchhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcch
Confidence                                                   34789999999999999999999999999999999999999


Q ss_pred             CCCCC------------------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          258 MTQGQ------------------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       258 ~~~~~------------------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                      |....                        +..+|+|+|..+++|++.+...+++|+.+..||+..
T Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~pediA~~v~fL~S~~as~~iTG~~i~vDGG~~  262 (272)
T d1xkqa_         198 FTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIANIILFLADRNLSFYILGQSIVADGGTS  262 (272)
T ss_dssp             HHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGG
T ss_pred             hhhccCCchHHHHHHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCcchhCCccCeEEEeCcCHH
Confidence            85432                        125799999999999973234689999999999864

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-42  Score=315.46  Aligned_cols=226  Identities=23%  Similarity=0.275  Sum_probs=202.3

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhC-----CCceeEEEeeCCCHHHHHHHHHHH
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEK-----GLPVNFFQLDVSDPSSIEAFVSWF  101 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~-----~~~~~~~~~Dlt~~~~~~~~~~~~  101 (302)
                      .++||+||||||++|||+++|++|+++|++|++++|+.+++++..+++...     +.++.++.+|++|+++++++++++
T Consensus         9 ~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~   88 (297)
T d1yxma1           9 LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKST   88 (297)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHH
Confidence            389999999999999999999999999999999999999999999988643     567899999999999999999999


Q ss_pred             HhhCCCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccc
Q 022103          102 KSNFAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIK  180 (302)
Q Consensus       102 ~~~~g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~  180 (302)
                      .+.+|++|+||||||.... ++.+.+.++|++++++|+.++++++|+++|.|.++ +.++||++||.. ..+        
T Consensus        89 ~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~-~~g~Ii~~ss~~-~~~--------  158 (297)
T d1yxma1          89 LDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKE-HGGSIVNIIVPT-KAG--------  158 (297)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHH-HCEEEEEECCCC-TTC--------
T ss_pred             HHHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhccc-cccccccccccc-ccc--------
Confidence            9999999999999998755 68899999999999999999999999999999887 678888886633 222        


Q ss_pred             cccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCC
Q 022103          181 SILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ  260 (302)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~  260 (302)
                                                        .++...|+++|+|+++|+++||.|++++|||||+|+||+|+|+|..
T Consensus       159 ----------------------------------~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~  204 (297)
T d1yxma1         159 ----------------------------------FPLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAV  204 (297)
T ss_dssp             ----------------------------------CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGG
T ss_pred             ----------------------------------ccccccchhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchh
Confidence                                              2234789999999999999999999999999999999999999864


Q ss_pred             CC-------------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          261 GQ-------------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       261 ~~-------------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                      ..                   +..+|+|+|..+++|++ +...+++|+.+..+|++
T Consensus       205 ~~~~~~~~~~~~~~~~~~plgR~g~pedvA~~v~fL~S-d~s~~iTG~~i~VDGG~  259 (297)
T d1yxma1         205 ENYGSWGQSFFEGSFQKIPAKRIGVPEEVSSVVCFLLS-PAASFITGQSVDVDGGR  259 (297)
T ss_dssp             TTSGGGGGGGGTTGGGGSTTSSCBCTHHHHHHHHHHHS-GGGTTCCSCEEEESTTG
T ss_pred             hhccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC-chhcCcCCcEEEeCcCh
Confidence            32                   12579999999999997 68889999999999985

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.4e-42  Score=304.48  Aligned_cols=212  Identities=22%  Similarity=0.331  Sum_probs=193.9

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      .+++||+++||||++|||+++|++|+++|++|++++|+.++++++++++.+.+.++..+.||++|+++++++++++.+++
T Consensus         3 ~~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~   82 (244)
T d1yb1a_           3 KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEI   82 (244)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHc
Confidence            46899999999999999999999999999999999999999999999999988899999999999999999999999999


Q ss_pred             CCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccc
Q 022103          106 AALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILE  184 (302)
Q Consensus       106 g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~  184 (302)
                      |.+|++|||||.... .+.+.+.+.|++++++|+.|++++++.++|.|.++ +.|+||++||..+..+.+.         
T Consensus        83 g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~~G~Iv~isS~~~~~~~~~---------  152 (244)
T d1yb1a_          83 GDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKN-NHGHIVTVASAAGHVSVPF---------  152 (244)
T ss_dssp             CCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEEECCCC-CCCHHH---------
T ss_pred             CCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhc-CCceEEEeecchhcCCCCC---------
Confidence            999999999998755 67888999999999999999999999999999988 6799999999999866432         


Q ss_pred             hhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccC---CCcEEEEeecCcccCCCCCC
Q 022103          185 DEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEG---EGISVNSYCPGFTQTSMTQG  261 (302)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~---~gI~V~~v~PG~v~T~~~~~  261 (302)
                                                       +.+|++||+|+++|+++|+.|+++   .||+|++|+||+|+|+|.++
T Consensus       153 ---------------------------------~~~Y~asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~~  199 (244)
T d1yb1a_         153 ---------------------------------LLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKN  199 (244)
T ss_dssp             ---------------------------------HHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTC
T ss_pred             ---------------------------------cHHHHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhhC
Confidence                                             478999999999999999999854   58999999999999999887


Q ss_pred             C-----CCCCHHHHHHHHHHHhhc
Q 022103          262 Q-----GSHTADEAADVGARLLLL  280 (302)
Q Consensus       262 ~-----~~~~~~~~a~~~~~l~~~  280 (302)
                      .     ...+|+++|..+...+..
T Consensus       200 ~~~~~~~~~~pe~va~~i~~~~~~  223 (244)
T d1yb1a_         200 PSTSLGPTLEPEEVVNRLMHGILT  223 (244)
T ss_dssp             THHHHCCCCCHHHHHHHHHHHHHT
T ss_pred             cCccccCCCCHHHHHHHHHHHHhc
Confidence            4     336899999999887653

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.3e-42  Score=306.76  Aligned_cols=228  Identities=21%  Similarity=0.285  Sum_probs=202.6

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCC--CceeEEEeeCCCHHHHHHHHHHHHhh
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKG--LPVNFFQLDVSDPSSIEAFVSWFKSN  104 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dlt~~~~~~~~~~~~~~~  104 (302)
                      .++||+||||||++|||+++|+.|+++|++|++++|+.++++++++++++.+  .++.++.||++++++++++++++.++
T Consensus         7 ~lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~   86 (257)
T d1xg5a_           7 RWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQ   86 (257)
T ss_dssp             GGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHh
Confidence            3899999999999999999999999999999999999999999999998875  47889999999999999999999999


Q ss_pred             CCCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCC-CCCcEEEecCCCcccccccCcccccc
Q 022103          105 FAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSP-SKSRILNISSRLGTLSKVRNPNIKSI  182 (302)
Q Consensus       105 ~g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~-~~~~iv~vsS~~~~~~~~~~~~~~~~  182 (302)
                      +|+||+||||||.... ++.+.+.++|+..+++|+.++++++++++|.|.+++ ..|+||++||.++....+.       
T Consensus        87 ~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~p~-------  159 (257)
T d1xg5a_          87 HSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPL-------  159 (257)
T ss_dssp             HCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSC-------
T ss_pred             cCCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCCCC-------
Confidence            9999999999998755 688999999999999999999999999999998764 4689999999988643221       


Q ss_pred             cchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHc--cCCCcEEEEeecCcccCCCCC
Q 022103          183 LEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRY--EGEGISVNSYCPGFTQTSMTQ  260 (302)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~--~~~gI~V~~v~PG~v~T~~~~  260 (302)
                                                       .....|+++|+|+.+|+++|+.|+  +++||+||+|+||+++|++..
T Consensus       160 ---------------------------------~~~~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~  206 (257)
T d1xg5a_         160 ---------------------------------SVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAF  206 (257)
T ss_dssp             ---------------------------------GGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHH
T ss_pred             ---------------------------------cccHHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhh
Confidence                                             123679999999999999999998  788999999999999999855


Q ss_pred             CC---------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCC
Q 022103          261 GQ---------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLD  295 (302)
Q Consensus       261 ~~---------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~  295 (302)
                      ..               +..+|+|+|+.+.+|++ ++..+++|++++..+
T Consensus       207 ~~~~~~~~~~~~~~~~~r~~~pedvA~~v~fL~s-~~a~~itG~i~i~~~  255 (257)
T d1xg5a_         207 KLHDKDPEKAAATYEQMKCLKPEDVAEAVIYVLS-TPAHIQIGDIQMRPT  255 (257)
T ss_dssp             HHTTTCHHHHHHHHC---CBCHHHHHHHHHHHHH-SCTTEEEEEEEEEET
T ss_pred             hcChhhHHHHHhcCCCCCCcCHHHHHHHHHHHhC-ChhcCeECCEEEEeC
Confidence            32               23689999999999997 788899999766544

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=5.1e-42  Score=305.58  Aligned_cols=229  Identities=20%  Similarity=0.205  Sum_probs=195.0

Q ss_pred             cccccccCcEEEEeCCCc--hHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHH
Q 022103           23 STKWWSKETIAIVTGANK--GIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSW  100 (302)
Q Consensus        23 ~~~~~~~~k~vlItGas~--gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~  100 (302)
                      |...+++||++|||||+|  |||+++|++|+++|++|++.+|+.+..+...+. .+.+....++.+|++|++++++++++
T Consensus         1 M~~~~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~-~~~~~~~~~~~~D~~~~~~v~~~~~~   79 (256)
T d1ulua_           1 MLTVDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKL-AEALGGALLFRADVTQDEELDALFAG   79 (256)
T ss_dssp             CEEECCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHH-HHHTTCCEEEECCTTCHHHHHHHHHH
T ss_pred             CCCcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHh-hhccCcccccccccCCHHHHHHHHHH
Confidence            456789999999999987  999999999999999999999987665554444 44455778899999999999999999


Q ss_pred             HHhhCCCccEEEEcCCCCCC-----CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCccccccc
Q 022103          101 FKSNFAALDILVNNAGVSFN-----DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVR  175 (302)
Q Consensus       101 ~~~~~g~id~lv~~aG~~~~-----~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~  175 (302)
                      +.+++|++|+||||||....     .+.+.+.++|+..+++|+.+++.++|++.|.|++.   |+||++||..+..+.+ 
T Consensus        80 ~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~---G~Iv~isS~~~~~~~~-  155 (256)
T d1ulua_          80 VKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREG---GGIVTLTYYASEKVVP-  155 (256)
T ss_dssp             HHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEE---EEEEEEECGGGTSBCT-
T ss_pred             HHHhcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccC---CEEEEEeehHhcCCCC-
Confidence            99999999999999998642     36778899999999999999999999999999764   8999999998876533 


Q ss_pred             CcccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCccc
Q 022103          176 NPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQ  255 (302)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~  255 (302)
                                                               .+.+|++||+|+++|+++||.|++++|||||+|+||+|+
T Consensus       156 -----------------------------------------~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~  194 (256)
T d1ulua_         156 -----------------------------------------KYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVR  194 (256)
T ss_dssp             -----------------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-
T ss_pred             -----------------------------------------CchHHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceee
Confidence                                                     247899999999999999999999999999999999999


Q ss_pred             CCCCCCCC-----------------CCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          256 TSMTQGQG-----------------SHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       256 T~~~~~~~-----------------~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                      |++.....                 ..+|+|+|+.+++|++ +...+++|+.+..||++.
T Consensus       195 t~~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S-~~s~~itG~~i~VDGG~~  253 (256)
T d1ulua_         195 TVAARSIPGFTKMYDRVAQTAPLRRNITQEEVGNLGLFLLS-PLASGITGEVVYVDAGYH  253 (256)
T ss_dssp             ---------CHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGG
T ss_pred             eccccchhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC-chhCCccCCeEEECcCEe
Confidence            99876542                 3689999999999997 788899999999999875

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=6.5e-42  Score=307.72  Aligned_cols=230  Identities=21%  Similarity=0.208  Sum_probs=204.8

Q ss_pred             ccccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecC-hhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHH
Q 022103           24 TKWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARD-VERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFK  102 (302)
Q Consensus        24 ~~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~-~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~  102 (302)
                      .+.+++||++|||||++|||+++|++|+++|++|++++|+ .+.++++.+++.+.+.++.++.+|++|+++++++++++.
T Consensus        12 ~~~sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~   91 (272)
T d1g0oa_          12 QSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAV   91 (272)
T ss_dssp             GGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCcCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHH
Confidence            4567999999999999999999999999999999999887 466788888998888899999999999999999999999


Q ss_pred             hhCCCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCccccc
Q 022103          103 SNFAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKS  181 (302)
Q Consensus       103 ~~~g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~  181 (302)
                      +++|++|++|||+|.... ++.+.+.++|++++++|+.++++++|++.|+|.++   +++++++|..+....        
T Consensus        92 ~~~g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~---g~~i~i~s~~~~~~~--------  160 (272)
T d1g0oa_          92 KIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIG---GRLILMGSITGQAKA--------  160 (272)
T ss_dssp             HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTT---CEEEEECCGGGTCSS--------
T ss_pred             HHhCCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccccc---ccccccccccccccc--------
Confidence            999999999999998755 68889999999999999999999999999999764   889999887764322        


Q ss_pred             ccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCC
Q 022103          182 ILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG  261 (302)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~  261 (302)
                                                       ++++..|+++|+|+++|+|+||.||+++|||||+|+||+|+|+|.+.
T Consensus       161 ---------------------------------~~~~~~Y~asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~  207 (272)
T d1g0oa_         161 ---------------------------------VPKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHA  207 (272)
T ss_dssp             ---------------------------------CSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHH
T ss_pred             ---------------------------------ccchhhHHHHHHHHHHHHHHHHHHhchhCeEEEEEccCCcCChHHHH
Confidence                                             23357799999999999999999999999999999999999987421


Q ss_pred             ----------------------------CCCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          262 ----------------------------QGSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       262 ----------------------------~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                                                  .+..+|+|+|..+++|++ +...+++|+.+..||++.
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~~peevA~~v~fL~s-~~s~~itG~~i~vDGG~~  271 (272)
T d1g0oa_         208 VCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIARVVCFLAS-NDGGWVTGKVIGIDGGAC  271 (272)
T ss_dssp             HGGGGSTTCTTCCHHHHHHHHHHHSCTTCSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTCC
T ss_pred             HHHhhhhcccccchHHHHHHHHHccCCCCCCcCHHHHHHHHHHHhC-chhcCccCceEeECCCCC
Confidence                                        123689999999999997 688899999999999863

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=100.00  E-value=4.1e-42  Score=309.88  Aligned_cols=225  Identities=18%  Similarity=0.104  Sum_probs=197.3

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      +.++||+||||||++|||+++|++|+++|++|++++|+.+++++..+++.   .++..+.+|++++++++++++++.+++
T Consensus         1 M~L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~---~~~~~~~~Dv~~~~~~~~~~~~~~~~~   77 (276)
T d1bdba_           1 MKLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHG---DNVLGIVGDVRSLEDQKQAASRCVARF   77 (276)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG---GGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcC---CCeeEEecccccHHHHHHHHHHHHHHh
Confidence            35899999999999999999999999999999999999999888777764   478999999999999999999999999


Q ss_pred             CCccEEEEcCCCCCC------CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCccc
Q 022103          106 AALDILVNNAGVSFN------DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNI  179 (302)
Q Consensus       106 g~id~lv~~aG~~~~------~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~  179 (302)
                      |++|++|||||+...      ...+.+.+.|++++++|+.++++++|+++|.|+++  .|+||+++|..+..+.+.    
T Consensus        78 g~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~--~g~iI~i~S~~~~~~~~~----  151 (276)
T d1bdba_          78 GKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVAS--RGNVIFTISNAGFYPNGG----  151 (276)
T ss_dssp             SCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEECCGGGTSTTSS----
T ss_pred             CCcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhc--CCCceeeeechhccCCCC----
Confidence            999999999997532      13445567899999999999999999999999876  589999999888755432    


Q ss_pred             ccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCC
Q 022103          180 KSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMT  259 (302)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~  259 (302)
                                                            +.+|++||+|+++|+|+||.|++++ ||||+|+||+|+|+|.
T Consensus       152 --------------------------------------~~~Y~asKaal~~ltr~lA~ela~~-IrVN~I~PG~i~T~~~  192 (276)
T d1bdba_         152 --------------------------------------GPLYTAAKHAIVGLVRELAFELAPY-VRVNGVGSGGINSDLR  192 (276)
T ss_dssp             --------------------------------------CHHHHHHHHHHHHHHHHHHHHHTTT-CEEEEEEECCCCSCCC
T ss_pred             --------------------------------------CchHHHHHHHHHHHHHHHHHHhhcc-eEEcccCCCCEecCcC
Confidence                                                  4789999999999999999999875 9999999999999986


Q ss_pred             CCC-------------------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          260 QGQ-------------------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       260 ~~~-------------------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                      ...                         +..+|+|+|..+++|++.+...+++|+.+..||+..
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peeva~~v~fL~S~~~a~~itG~~i~VDGG~~  256 (276)
T d1bdba_         193 GPSSLGMGSKAISTVPLADMLKSVLPIGRMPEVEEYTGAYVFFATRGDAAPATGALLNYDGGLG  256 (276)
T ss_dssp             CCGGGC---------CHHHHHTTTCTTSSCCCGGGGSHHHHHHHCHHHHTTCSSCEEEESSSGG
T ss_pred             CccchhhhhhccCcHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCCcccCCeeCcEEEECcChh
Confidence            432                         125799999999999874467889999999999854

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.9e-42  Score=307.16  Aligned_cols=260  Identities=33%  Similarity=0.600  Sum_probs=210.6

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHc-CCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCcc
Q 022103           31 TIAIVTGANKGIGFALVKRLAEL-GLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALD  109 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~-G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id  109 (302)
                      +++|||||++|||+++|++|+++ |++|++++|+.+++++++++|++.+.++.++.+|++|.++++++++++.+++|+||
T Consensus         4 rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~iD   83 (275)
T d1wmaa1           4 HVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGGLD   83 (275)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSSEE
T ss_pred             eEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcCCcE
Confidence            56699999999999999999986 89999999999999999999999888999999999999999999999999999999


Q ss_pred             EEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCc-ccccccchhh
Q 022103          110 ILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNP-NIKSILEDEE  187 (302)
Q Consensus       110 ~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~-~~~~~~~~~~  187 (302)
                      +||||||+..+ ...+.+.++|+.++++|++|+++++++++|.|+++   |+||+++|..+..+.+... ...+......
T Consensus        84 iLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~---g~ivnisS~~~~~~~~~~~~y~~~k~~~~~  160 (275)
T d1wmaa1          84 VLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQ---GRVVNVSSIMSVRALKSCSPELQQKFRSET  160 (275)
T ss_dssp             EEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEE---EEEEEECCHHHHHHHHTSCHHHHHHHHCSS
T ss_pred             EEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CCcccccccceeccccccchhhhhhhcccc
Confidence            99999998755 56778889999999999999999999999999754   8999999998876544321 1001111111


Q ss_pred             hcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccC----CCcEEEEeecCcccCCCCCCCC
Q 022103          188 LSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEG----EGISVNSYCPGFTQTSMTQGQG  263 (302)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~----~gI~V~~v~PG~v~T~~~~~~~  263 (302)
                      ............+......+.+.....|  ..+|++||+++.+|++.+++++++    .||+||+|+||+|+|+|.++..
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T~m~~~~~  238 (275)
T d1wmaa1         161 ITEEELVGLMNKFVEDTKKGVHQKEGWP--SSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPKA  238 (275)
T ss_dssp             CCHHHHHHHHHHHHHHHHTTCTTTTTCC--SCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCTTC
T ss_pred             cchhhhccccccchhcccccccccCCCc--hHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccCCcccCcc
Confidence            1222233333444444555555444433  368999999999999999998854    5999999999999999999988


Q ss_pred             CCCHHHHHHHHHHHhhc-CCCCCCCcceeecCC
Q 022103          264 SHTADEAADVGARLLLL-HPQQLPTAKFYIGLD  295 (302)
Q Consensus       264 ~~~~~~~a~~~~~l~~~-~~~~~~~G~~~~~~~  295 (302)
                      ..+|++.|..+++++.. +....++|+||...+
T Consensus       239 ~~~pee~A~~~~~~a~~~~~~~~~~G~~~~~~~  271 (275)
T d1wmaa1         239 TKSPEEGAETPVYLALLPPDAEGPHGQFVSEKR  271 (275)
T ss_dssp             SBCHHHHTHHHHHHHSCCTTCCCCCSCEEETTE
T ss_pred             cCCHHHHHHHHHHHHcCChhhcCCCeEEEECCE
Confidence            88999999999998643 344567999987443

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=4.2e-42  Score=313.62  Aligned_cols=226  Identities=18%  Similarity=0.201  Sum_probs=199.9

Q ss_pred             cccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecC---------hhhHHHHHHHHhhCCCceeEEEeeCCCHHHHH
Q 022103           25 KWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARD---------VERGQRAVESLSEKGLPVNFFQLDVSDPSSIE   95 (302)
Q Consensus        25 ~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~---------~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~   95 (302)
                      +++++||++|||||++|||+++|+.|+++|++|++.+|+         .+.+++..+++...   ...+.+|+++.++++
T Consensus         2 Pm~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~d~~~~~~~~   78 (302)
T d1gz6a_           2 PLRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRR---GGKAVANYDSVEAGE   78 (302)
T ss_dssp             CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHT---TCEEEEECCCGGGHH
T ss_pred             CcCcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhc---ccccccccchHHHHH
Confidence            467899999999999999999999999999999998654         55677777777653   456778999999999


Q ss_pred             HHHHHHHhhCCCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccc
Q 022103           96 AFVSWFKSNFAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKV  174 (302)
Q Consensus        96 ~~~~~~~~~~g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~  174 (302)
                      ++++++.+++|+||+||||||+... ++.+.+.++|++++++|+.++++++|+++|+|+++ +.|+||++||..+..+.+
T Consensus        79 ~~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~-~~G~IV~isS~~~~~~~~  157 (302)
T d1gz6a_          79 KLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQ-NYGRIIMTASASGIYGNF  157 (302)
T ss_dssp             HHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TCEEEEEECCHHHHHCCT
T ss_pred             HHHHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhC-CCcEEEEeCChhhcCCCC
Confidence            9999999999999999999998765 68999999999999999999999999999999987 579999999999876643


Q ss_pred             cCcccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcc
Q 022103          175 RNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFT  254 (302)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v  254 (302)
                      .                                          +.+|++||+|+.+|+++|+.|++++|||||+|+||++
T Consensus       158 ~------------------------------------------~~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~  195 (302)
T d1gz6a_         158 G------------------------------------------QANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG  195 (302)
T ss_dssp             T------------------------------------------CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC
T ss_pred             C------------------------------------------cHHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCC
Confidence            3                                          4789999999999999999999999999999999999


Q ss_pred             cCCCCCCCCC-----CCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          255 QTSMTQGQGS-----HTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       255 ~T~~~~~~~~-----~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                      .|++......     ..|+++|..+++|++ +. .+++|+++..+|+++
T Consensus       196 ~t~~~~~~~~~~~~~~~PedvA~~v~fL~S-~~-a~itG~~i~vdGG~~  242 (302)
T d1gz6a_         196 SRMTETVMPEDLVEALKPEYVAPLVLWLCH-ES-CEENGGLFEVGAGWI  242 (302)
T ss_dssp             STTTGGGSCHHHHHHSCGGGTHHHHHHHTS-TT-CCCCSCEEEEETTEE
T ss_pred             CcchhhcCcHhhHhcCCHHHHHHHHHHHcC-CC-cCCCCcEEEeCCCce
Confidence            9888665432     679999999999986 44 468999999999864

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=100.00  E-value=5.2e-42  Score=305.32  Aligned_cols=217  Identities=18%  Similarity=0.138  Sum_probs=194.4

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCccEE
Q 022103           32 IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDIL  111 (302)
Q Consensus        32 ~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id~l  111 (302)
                      |+|||||++|||+++|++|+++|++|++++|+.++++++.+....      .+.+|++++++++++++++.++||+||+|
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~~~------~~~~dv~~~~~~~~~~~~~~~~~G~iDiL   75 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAET------YPQLKPMSEQEPAELIEAVTSAYGQVDVL   75 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHH------CTTSEECCCCSHHHHHHHHHHHHSCCCEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhhCc------EEEeccCCHHHHHHHHHHHHHHcCCCCEE
Confidence            899999999999999999999999999999999888776554332      24589999999999999999999999999


Q ss_pred             EEcCCCCCC--CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhhc
Q 022103          112 VNNAGVSFN--DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELS  189 (302)
Q Consensus       112 v~~aG~~~~--~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~  189 (302)
                      |||||....  ++.+.+.++|++++++|+.++++++|+++|+|+++ +.|+||++||..+..+.+.              
T Consensus        76 VnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~-~~G~IV~isS~~~~~~~~~--------------  140 (252)
T d1zmta1          76 VSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKR-KSGHIIFITSATPFGPWKE--------------  140 (252)
T ss_dssp             EEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEEEECCSTTTSCCTT--------------
T ss_pred             EECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhccc-ccceeeccccccccccccc--------------
Confidence            999997643  68899999999999999999999999999999987 5799999999998765432              


Q ss_pred             HHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC-------
Q 022103          190 EEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ-------  262 (302)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~-------  262 (302)
                                                  +.+|++||+|+++|+|+||.|++++|||||+|+||+|+|+|....       
T Consensus       141 ----------------------------~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~  192 (252)
T d1zmta1         141 ----------------------------LSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWK  192 (252)
T ss_dssp             ----------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHT
T ss_pred             ----------------------------ccccccccccHHHHHHHHHHHhcccCcEEEEEecCCCcCcchhhhhhccccc
Confidence                                        478999999999999999999999999999999999999997653       


Q ss_pred             ----------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          263 ----------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       263 ----------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                                      +..+|+|+|..+++|++ +...+++|+.+..+|++.
T Consensus       193 ~~~e~~~~~~~~~pl~R~g~pedvA~~v~fL~S-~~s~~iTG~~i~vdGG~~  243 (252)
T d1zmta1         193 TNPEHVAHVKKVTALQRLGTQKELGELVAFLAS-GSCDYLTGQVFWLAGGFP  243 (252)
T ss_dssp             TCHHHHHHHHHHSSSSSCBCHHHHHHHHHHHHT-TSCGGGTTCEEEESTTCC
T ss_pred             CCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC-chhcCCcCCeEEECCCce
Confidence                            12589999999999997 788899999999999964

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=4.9e-42  Score=306.49  Aligned_cols=227  Identities=23%  Similarity=0.251  Sum_probs=200.6

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEe-cChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhh
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTA-RDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSN  104 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~-r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~  104 (302)
                      ..+.||+||||||++|||+++|+.|+++|++|++.+ |+.+.++++.+++++.+.++.++.+|++|+++++.+++++.++
T Consensus         2 ~~L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~   81 (259)
T d1ja9a_           2 KPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSH   81 (259)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHH
Confidence            358999999999999999999999999999999865 5566678999999999999999999999999999999999999


Q ss_pred             CCCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCccccccc
Q 022103          105 FAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSIL  183 (302)
Q Consensus       105 ~g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~  183 (302)
                      +|.+|++|||||.... ++.+.+.+.|++++++|+.++++++|+++|+|+++   +++++++|..+....          
T Consensus        82 ~g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~---g~~iii~s~~~~~~~----------  148 (259)
T d1ja9a_          82 FGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG---GRIILTSSIAAVMTG----------  148 (259)
T ss_dssp             HSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE---EEEEEECCGGGTCCS----------
T ss_pred             cCCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcC---CcccccccccccccC----------
Confidence            9999999999998755 67889999999999999999999999999999765   778888876654321          


Q ss_pred             chhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC-
Q 022103          184 EDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ-  262 (302)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~-  262 (302)
                                                     .+.+..|+++|+|+++|+|+||+|++++|||||+|+||+++|+|.+.. 
T Consensus       149 -------------------------------~~~~~~Y~asK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~  197 (259)
T d1ja9a_         149 -------------------------------IPNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENS  197 (259)
T ss_dssp             -------------------------------CCSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHG
T ss_pred             -------------------------------CCCchhHHHHHHHHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhh
Confidence                                           123478999999999999999999999999999999999999874210 


Q ss_pred             ---------------------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          263 ---------------------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       263 ---------------------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                                                 +..+|+|+|..+.+|++ +...+++|+.+..||+.
T Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~p~eVa~~v~fL~S-~~a~~itG~~i~vDGG~  258 (259)
T d1ja9a_         198 WHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIGRAVSALCQ-EESEWINGQVIKLTGGG  258 (259)
T ss_dssp             GGTSTTCCTTCCHHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTC
T ss_pred             hhhhhhhcccCCHHHHHHHHHhCCCCCCCcCHHHHHHHHHHHhC-chhcCCcCceEEeCCCC
Confidence                                       23679999999999997 67889999999999975

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.8e-42  Score=303.83  Aligned_cols=218  Identities=27%  Similarity=0.324  Sum_probs=193.5

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhC--CCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEK--GLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      .+||+||||||++|||+++|+.|+++|++|++++|+.+++++..+++.+.  +.++.++.+|++|+++++++++++.+++
T Consensus         1 i~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (254)
T d2gdza1           1 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF   80 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHc
Confidence            37999999999999999999999999999999999999999999998765  4578899999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCC--CCCcEEEecCCCcccccccCccccccc
Q 022103          106 AALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSP--SKSRILNISSRLGTLSKVRNPNIKSIL  183 (302)
Q Consensus       106 g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~--~~~~iv~vsS~~~~~~~~~~~~~~~~~  183 (302)
                      |++|+||||||...       .++|++++++|+.+++++++.++|+|.++.  ..|+||++||..+..+.+.        
T Consensus        81 G~iDilVnnAg~~~-------~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~~~~--------  145 (254)
T d2gdza1          81 GRLDILVNNAGVNN-------EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQ--------  145 (254)
T ss_dssp             SCCCEEEECCCCCC-------SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTT--------
T ss_pred             CCcCeecccccccc-------cccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccCCCC--------
Confidence            99999999999853       345899999999999999999999998763  2488999999998766432        


Q ss_pred             chhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHH--HHHHccCCCcEEEEeecCcccCCCCCC
Q 022103          184 EDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMV--LAKRYEGEGISVNSYCPGFTQTSMTQG  261 (302)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~--la~e~~~~gI~V~~v~PG~v~T~~~~~  261 (302)
                                                        +.+|++||+|+++|+|+  |+.|++++|||||+|+||+|+|+|+..
T Consensus       146 ----------------------------------~~~Y~asKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~~~~  191 (254)
T d2gdza1         146 ----------------------------------QPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILES  191 (254)
T ss_dssp             ----------------------------------CHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHG
T ss_pred             ----------------------------------ccchHHHHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChhhhh
Confidence                                              47899999999999997  788999999999999999999998654


Q ss_pred             C-----------------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          262 Q-----------------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       262 ~-----------------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                      .                       +..+|+|+|..+++|++ +  ++++|+.+..+|..
T Consensus       192 ~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s-~--~~itG~~i~VdGG~  247 (254)
T d2gdza1         192 IEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLITLIE-D--DALNGAIMKITTSK  247 (254)
T ss_dssp             GGCHHHHGGGGGGHHHHHHHHHHHCCBCHHHHHHHHHHHHH-C--TTCSSCEEEEETTT
T ss_pred             ccccccccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHc-C--CCCCCCEEEECCCC
Confidence            2                       23689999999999997 3  24999999998874

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=100.00  E-value=1.7e-41  Score=300.11  Aligned_cols=222  Identities=25%  Similarity=0.267  Sum_probs=192.7

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      .++||+||||||++|||+++|++|+++|++|++++|+.+++++..+++   +.++.++++|++++++++++++++.+++|
T Consensus         2 ~l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dls~~~~i~~~~~~i~~~~g   78 (241)
T d2a4ka1           2 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL---EAEAIAVVADVSDPKAVEAVFAEALEEFG   78 (241)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC---CSSEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc---CCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            378999999999999999999999999999999999998877665544   56889999999999999999999999999


Q ss_pred             CccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccch
Q 022103          107 ALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILED  185 (302)
Q Consensus       107 ~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~  185 (302)
                      ++|+||||||.... ++.+.+.++|++++++|+.++++++|+++|+|.+.   +.++++||.+.. +             
T Consensus        79 ~iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~---~~i~~~ss~a~~-~-------------  141 (241)
T d2a4ka1          79 RLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEG---GSLVLTGSVAGL-G-------------  141 (241)
T ss_dssp             CCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTT---CEEEEECCCTTC-C-------------
T ss_pred             CccEeccccccccccchhhhhccccccccccccccccccccccccccccc---cceeeccccccc-c-------------
Confidence            99999999998755 68899999999999999999999999999988654   566666665443 1             


Q ss_pred             hhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCCC--
Q 022103          186 EELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQG--  263 (302)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~~--  263 (302)
                                                   ++++..|+++|+|+++|+++||.|++++|||||+|+||+|+|+|.+...  
T Consensus       142 -----------------------------~~~~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~  192 (241)
T d2a4ka1         142 -----------------------------AFGLAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLPPW  192 (241)
T ss_dssp             -----------------------------HHHHHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSCHH
T ss_pred             -----------------------------ccCccccchhhHHHHHHHHHHHHHHhHhCCEEeeeccCcCCCHHHHhhhHh
Confidence                                         1224679999999999999999999999999999999999999987642  


Q ss_pred             -------------CCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          264 -------------SHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       264 -------------~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                                   ..+|+|+|..+++|++ +...+++|+.+..||+..
T Consensus       193 ~~~~~~~~~p~~r~~~p~dva~~v~fL~S-~~s~~itG~~i~vDGG~s  239 (241)
T d2a4ka1         193 AWEQEVGASPLGRAGRPEEVAQAALFLLS-EESAYITGQALYVDGGRS  239 (241)
T ss_dssp             HHHHHHHTSTTCSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTTT
T ss_pred             HHHHHHhCCCCCCCcCHHHHHHHHHHHhc-chhCCCcCceEEeCCCcc
Confidence                         2589999999999997 788899999999999854

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=1e-40  Score=293.78  Aligned_cols=212  Identities=23%  Similarity=0.229  Sum_probs=184.6

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      ++||++|||||++|||+++|+.|+++|++|++++|+.+.+++       .  ...++.+|+++.      ++.+.+++++
T Consensus         2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~-------~--~~~~~~~Dv~~~------~~~~~~~~g~   66 (234)
T d1o5ia_           2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKR-------S--GHRYVVCDLRKD------LDLLFEKVKE   66 (234)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-------T--CSEEEECCTTTC------HHHHHHHSCC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHh-------c--CCcEEEcchHHH------HHHHHHHhCC
Confidence            789999999999999999999999999999999999766543       2  235678999864      3445567799


Q ss_pred             ccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchh
Q 022103          108 LDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDE  186 (302)
Q Consensus       108 id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~  186 (302)
                      +|+||||||.... ++.+.+.++|++++++|+.++++++|+++|.|+++ ..|+||+++|..+..+.+            
T Consensus        67 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~-~~G~ii~i~S~~~~~~~~------------  133 (234)
T d1o5ia_          67 VDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEK-GWGRIVAITSFSVISPIE------------  133 (234)
T ss_dssp             CSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTSCCT------------
T ss_pred             CcEEEecccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhccccccccc-cccccccccccccccccc------------
Confidence            9999999998755 67889999999999999999999999999999987 679999999987765432            


Q ss_pred             hhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC----
Q 022103          187 ELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ----  262 (302)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~----  262 (302)
                                                    ....|+++|+|+++|+|+||.|++++|||||+|+||+++|+|....    
T Consensus       134 ------------------------------~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~~  183 (234)
T d1o5ia_         134 ------------------------------NLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSEE  183 (234)
T ss_dssp             ------------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSCHH
T ss_pred             ------------------------------ccccchhHHHHHHHHHHHHHHHhcccCeEEeecccCccchhhhhhhcCHH
Confidence                                          2478999999999999999999999999999999999999996542    


Q ss_pred             ------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          263 ------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       263 ------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                                  +..+|+|+|..+.+|++ +...+++|+.+..||++.
T Consensus       184 ~~~~~~~~~pl~R~~~pediA~~v~fL~S-~~s~~itG~~i~vDGG~s  230 (234)
T d1o5ia_         184 KKKQVESQIPMRRMAKPEEIASVVAFLCS-EKASYLTGQTIVVDGGLS  230 (234)
T ss_dssp             HHHHHHTTSTTSSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTCC
T ss_pred             HHHHHHhcCCCCCCcCHHHHHHHHHHHhC-hhhcCCcCcEEEECcccc
Confidence                        23689999999999997 788899999999999864

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=100.00  E-value=1e-39  Score=296.01  Aligned_cols=234  Identities=19%  Similarity=0.194  Sum_probs=204.0

Q ss_pred             cccccccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhh-CCCceeEEEeeCCCHHHHHHHHH
Q 022103           21 VSSTKWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSE-KGLPVNFFQLDVSDPSSIEAFVS   99 (302)
Q Consensus        21 ~~~~~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dlt~~~~~~~~~~   99 (302)
                      .++++.+++||+||||||++|||+++|++|+++|++|++++|+.+++++.++++.. .+.++.++.+|++++++++++++
T Consensus        16 ~~~~~~~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~   95 (294)
T d1w6ua_          16 AMLPPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVS   95 (294)
T ss_dssp             CCSCTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHH
T ss_pred             cCCCCCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhh
Confidence            34556789999999999999999999999999999999999999999999888764 36688999999999999999999


Q ss_pred             HHHhhCCCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcc
Q 022103          100 WFKSNFAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPN  178 (302)
Q Consensus       100 ~~~~~~g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~  178 (302)
                      .+.++++++|+||||||.... ++...+.++++..+.+|+.+.+++.+...+.+......+.+++++|..+..+.     
T Consensus        96 ~~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~~-----  170 (294)
T d1w6ua_          96 ELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGS-----  170 (294)
T ss_dssp             HHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCC-----
T ss_pred             hhhhhccccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhcc-----
Confidence            999999999999999998755 57889999999999999999999999988888777567788888887766443     


Q ss_pred             cccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCC
Q 022103          179 IKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSM  258 (302)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~  258 (302)
                                                           +++.+|+++|+|+++|+|+||.|++++|||||+|+||+|+|++
T Consensus       171 -------------------------------------~~~~~YsasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~  213 (294)
T d1w6ua_         171 -------------------------------------GFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKG  213 (294)
T ss_dssp             -------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC--
T ss_pred             -------------------------------------cccchHHHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccch
Confidence                                                 2347899999999999999999999999999999999999999


Q ss_pred             CCCC------------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          259 TQGQ------------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       259 ~~~~------------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                      ....                  +..+|+|+|..+.+|++ +...+++|+.+..||+.
T Consensus       214 ~~~~~~~~~~~~~~~~~~~pl~R~~~pediA~~v~fL~s-d~s~~itG~~i~vDGG~  269 (294)
T d1w6ua_         214 AFSRLDPTGTFEKEMIGRIPCGRLGTVEELANLAAFLCS-DYASWINGAVIKFDGGE  269 (294)
T ss_dssp             ----CCTTSHHHHHHHTTCTTSSCBCHHHHHHHHHHHTS-GGGTTCCSCEEEESTTH
T ss_pred             hhhccCCcHHHHHHHhhcCCCCCCCCHHHHHHHHHHHhC-chhcCCCCcEEEECCCh
Confidence            7643                  12689999999999997 67788999999999874

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=100.00  E-value=1.3e-39  Score=288.74  Aligned_cols=227  Identities=22%  Similarity=0.277  Sum_probs=193.4

Q ss_pred             cEEEEeCCCchHHHHHHHHHH---HcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHh--hC
Q 022103           31 TIAIVTGANKGIGFALVKRLA---ELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKS--NF  105 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~---~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~--~~  105 (302)
                      |+||||||++|||+++|++|+   ++|++|++++|+.++++++.+.+. .+.++.++.+|++|+++++++++++.+  .+
T Consensus         3 KtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~   81 (248)
T d1snya_           3 NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAK-NHSNIHILEIDLRNFDAYDKLVADIEGVTKD   81 (248)
T ss_dssp             SEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHH-HCTTEEEEECCTTCGGGHHHHHHHHHHHHGG
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHh-cCCcEEEEEEEeccHHHHHHHHhhhHHHhhc
Confidence            789999999999999999996   469999999999998887655444 456899999999999999999999864  67


Q ss_pred             CCccEEEEcCCCCCC--CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcC----------CCCCcEEEecCCCccccc
Q 022103          106 AALDILVNNAGVSFN--DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRS----------PSKSRILNISSRLGTLSK  173 (302)
Q Consensus       106 g~id~lv~~aG~~~~--~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~----------~~~~~iv~vsS~~~~~~~  173 (302)
                      +++|+||||||+...  .+.+.+.++|++++++|+.|+++++++++|+|+++          ...+++|+++|..+....
T Consensus        82 ~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~~~~  161 (248)
T d1snya_          82 QGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQG  161 (248)
T ss_dssp             GCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCSTT
T ss_pred             CCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccccccccCC
Confidence            899999999998644  46788999999999999999999999999999864          136899999998876543


Q ss_pred             ccCcccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCc
Q 022103          174 VRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGF  253 (302)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~  253 (302)
                      ..                                       .+++.+|++||+|+.+|+++|+.|++++||+||+|+||+
T Consensus       162 ~~---------------------------------------~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~  202 (248)
T d1snya_         162 NT---------------------------------------DGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGW  202 (248)
T ss_dssp             CC---------------------------------------SCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCS
T ss_pred             CC---------------------------------------CCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCc
Confidence            22                                       233578999999999999999999999999999999999


Q ss_pred             ccCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          254 TQTSMTQGQGSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       254 v~T~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                      |+|+|........+++.+..++..+... .+..+|++|.++|+.+
T Consensus       203 v~T~m~~~~~~~~~~~~~~~i~~~i~~l-~~~~tG~~i~~dG~~i  246 (248)
T d1snya_         203 VKTDMGGSSAPLDVPTSTGQIVQTISKL-GEKQNGGFVNYDGTPL  246 (248)
T ss_dssp             BCSTTTCTTCSBCHHHHHHHHHHHHHHC-CGGGTTCEECTTSCBC
T ss_pred             ccCCcccccCCCCchHHHHHHHHHHHhc-CccCCCcEEEECCeEc
Confidence            9999999887777777777777766533 3346899999988753

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=100.00  E-value=1.5e-40  Score=296.22  Aligned_cols=219  Identities=21%  Similarity=0.218  Sum_probs=187.6

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhC-CCceeEEEeeCC-CHHHHHHHHHHHHh
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEK-GLPVNFFQLDVS-DPSSIEAFVSWFKS  103 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dlt-~~~~~~~~~~~~~~  103 (302)
                      ++++||+||||||++|||+++|++|+++|++|++++|+.++.+...+..... +.++.++.+|++ +.++++++++++.+
T Consensus         1 m~l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~   80 (254)
T d1sbya1           1 MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFD   80 (254)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999999887766655444333 347889999998 77889999999999


Q ss_pred             hCCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCC--CCCcEEEecCCCcccccccCccccc
Q 022103          104 NFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSP--SKSRILNISSRLGTLSKVRNPNIKS  181 (302)
Q Consensus       104 ~~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~--~~~~iv~vsS~~~~~~~~~~~~~~~  181 (302)
                      ++|+||+||+|||..       +.+.|++++++|++|+++++++++|+|.+++  ..++||+++|..+..+.+       
T Consensus        81 ~~g~iDilvnnAG~~-------~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~~~-------  146 (254)
T d1sbya1          81 QLKTVDILINGAGIL-------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIH-------  146 (254)
T ss_dssp             HHSCCCEEEECCCCC-------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCT-------
T ss_pred             HcCCCCEEEeCCCCC-------CHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccCCC-------
Confidence            999999999999973       5678999999999999999999999997752  468999999999876643       


Q ss_pred             ccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCC
Q 022103          182 ILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG  261 (302)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~  261 (302)
                                                         ++.+|++||+|+.+|+++|+.|+.++|||||+|+||+|+|+|.+.
T Consensus       147 -----------------------------------~~~~Y~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~~~~~  191 (254)
T d1sbya1         147 -----------------------------------QVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHT  191 (254)
T ss_dssp             -----------------------------------TSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHS
T ss_pred             -----------------------------------CCHHHHHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCccccc
Confidence                                               347899999999999999999999999999999999999998654


Q ss_pred             CC-----------------CCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          262 QG-----------------SHTADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       262 ~~-----------------~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                      +.                 ..+||++|..+..+...    ..+|++|..+|+.
T Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~e~va~~~~~~~~~----~~tG~vi~vdgG~  240 (254)
T d1sbya1         192 FNSWLDVEPRVAELLLSHPTQTSEQCGQNFVKAIEA----NKNGAIWKLDLGT  240 (254)
T ss_dssp             CCCGGGSCTTHHHHHTTSCCEEHHHHHHHHHHHHHH----CCTTCEEEEETTE
T ss_pred             cccchhHHHHHHhccccCCCCCHHHHHHHHHHhhhC----CCCCCEEEECCCE
Confidence            32                 14689999888877652    2489999888864

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=8.6e-40  Score=291.67  Aligned_cols=224  Identities=23%  Similarity=0.229  Sum_probs=195.0

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHH---cCCEEEEEecChhhHHHHHHHHhhC--CCceeEEEeeCCCHHHHHHHHHH
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAE---LGLTVILTARDVERGQRAVESLSEK--GLPVNFFQLDVSDPSSIEAFVSW  100 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~---~G~~V~l~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dlt~~~~~~~~~~~  100 (302)
                      ..|+||++|||||++|||+++|++|++   +|++|++++|+.++++++.++|...  +.++.++.||++++++++++++.
T Consensus         2 ~~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~   81 (259)
T d1oaaa_           2 DGLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSA   81 (259)
T ss_dssp             CCCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHH
Confidence            468999999999999999999999997   6999999999999999999999764  45788999999999999999999


Q ss_pred             HHh----hCCCccEEEEcCCCCCC----CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCC-CCCcEEEecCCCccc
Q 022103          101 FKS----NFAALDILVNNAGVSFN----DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSP-SKSRILNISSRLGTL  171 (302)
Q Consensus       101 ~~~----~~g~id~lv~~aG~~~~----~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~-~~~~iv~vsS~~~~~  171 (302)
                      +.+    .++.+|++|+|||...+    .+.+.+.++|+.++++|+.++++++|+++|+|++++ ..++||++||..+..
T Consensus        82 ~~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~  161 (259)
T d1oaaa_          82 VRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQ  161 (259)
T ss_dssp             HHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTS
T ss_pred             HHHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccccC
Confidence            876    34689999999997532    477899999999999999999999999999998863 258999999998876


Q ss_pred             ccccCcccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeec
Q 022103          172 SKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCP  251 (302)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~P  251 (302)
                      +.+                                          ++.+|++||+|+++|+++||.|  .+|||||+|+|
T Consensus       162 ~~~------------------------------------------~~~~Y~asKaal~~lt~~la~e--~~gIrVn~v~P  197 (259)
T d1oaaa_         162 PYK------------------------------------------GWGLYCAGKAARDMLYQVLAAE--EPSVRVLSYAP  197 (259)
T ss_dssp             CCT------------------------------------------TCHHHHHHHHHHHHHHHHHHHH--CTTEEEEEEEC
T ss_pred             CCc------------------------------------------cchHHHHHHHHHHHHHHHHHhC--CCCCEEEEEEc
Confidence            543                                          3478999999999999999998  57999999999


Q ss_pred             CcccCCCCCCC--------------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCC
Q 022103          252 GFTQTSMTQGQ--------------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLD  295 (302)
Q Consensus       252 G~v~T~~~~~~--------------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~  295 (302)
                      |+|.|+|.+..                    ...+|+++|..+++|+..  ..+++|+++.+.|
T Consensus       198 G~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~p~evA~~i~~ll~~--~s~~TG~~idv~d  259 (259)
T d1oaaa_         198 GPLDNDMQQLARETSKDPELRSKLQKLKSDGALVDCGTSAQKLLGLLQK--DTFQSGAHVDFYD  259 (259)
T ss_dssp             CSBSSHHHHHHHHHCSCHHHHHHHHHHHHTTCSBCHHHHHHHHHHHHHH--CCSCTTEEEETTC
T ss_pred             CCCCCHHHHHhhhcCCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhhh--ccCCCCCeEEecC
Confidence            99999985421                    236899999999999973  4589999987754

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=5.3e-40  Score=291.58  Aligned_cols=231  Identities=27%  Similarity=0.372  Sum_probs=183.1

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCC--EEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGL--TVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~--~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      |+.|+||||||++|||+++|++|+++|+  +|++.+|+.++++++.+   ..+.++.++.+|++++++++++++++.+.+
T Consensus         1 M~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~---~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~   77 (250)
T d1yo6a1           1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKS---IKDSRVHVLPLTVTCDKSLDTFVSKVGEIV   77 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHT---CCCTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CcCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHH---hhCCceEEEEEecCCHHHHHHHHHHHHHHh
Confidence            4679999999999999999999999995  79999999988776443   234579999999999999999999999877


Q ss_pred             C--CccEEEEcCCCCCC--CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCC----------CCCcEEEecCCCccc
Q 022103          106 A--ALDILVNNAGVSFN--DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSP----------SKSRILNISSRLGTL  171 (302)
Q Consensus       106 g--~id~lv~~aG~~~~--~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~----------~~~~iv~vsS~~~~~  171 (302)
                      +  .+|+||||||+..+  ++.+.+.++|++++++|+.|++++++.++|+|+++.          ..++++++++..+..
T Consensus        78 ~~~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~  157 (250)
T d1yo6a1          78 GSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSI  157 (250)
T ss_dssp             GGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCS
T ss_pred             CCCCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccccccccc
Confidence            5  49999999998643  567899999999999999999999999999998642          236788888776654


Q ss_pred             ccccCcccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeec
Q 022103          172 SKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCP  251 (302)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~P  251 (302)
                      .....                                   ...+.++.+|++||+|+.+|+++|+.|++++||+||+|+|
T Consensus       158 ~~~~~-----------------------------------~~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~P  202 (250)
T d1yo6a1         158 TDNTS-----------------------------------GSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCP  202 (250)
T ss_dssp             TTCCS-----------------------------------TTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEEC
T ss_pred             cCCcc-----------------------------------cccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEec
Confidence            43321                                   1112334679999999999999999999999999999999


Q ss_pred             CcccCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          252 GFTQTSMTQGQGSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       252 G~v~T~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                      |+|+|+|.......+||+.+..++..+.. .....+|+||..+++.
T Consensus       203 G~v~T~m~~~~~~~~~e~~a~~~~~~~~~-~~~~~sG~f~~~~g~p  247 (250)
T d1yo6a1         203 GWVQTNLGGKNAALTVEQSTAELISSFNK-LDNSHNGRFFMRNLKP  247 (250)
T ss_dssp             CCC-------------HHHHHHHHHHHTT-CCGGGTTCEEETTEEE
T ss_pred             CCCCCCCCCCCCCCCHHHHHHHHHHHHhc-CCCCCCeEEECCCCee
Confidence            99999999888888999999999998874 4555899999988753

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-39  Score=289.19  Aligned_cols=219  Identities=24%  Similarity=0.256  Sum_probs=188.9

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      ++||++|||||++|||+++|+.|+++|++|++++|+++++++..+     ...+....+|+.+.+.++...    ..++.
T Consensus         4 l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~-----~~~~~~~~~d~~~~~~~~~~~----~~~~~   74 (245)
T d2ag5a1           4 LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEK-----YPGIQTRVLDVTKKKQIDQFA----NEVER   74 (245)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGG-----STTEEEEECCTTCHHHHHHHH----HHCSC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-----ccCCceeeeeccccccccccc----ccccc
Confidence            899999999999999999999999999999999999877665433     235778889998877665544    45689


Q ss_pred             ccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchh
Q 022103          108 LDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDE  186 (302)
Q Consensus       108 id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~  186 (302)
                      +|+||||+|.... ++.+.+.++|+..+++|+.++++++|++.|.|.++ ..|+||+++|..+....             
T Consensus        75 id~lVn~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~-~~g~Ii~isS~~~~~~~-------------  140 (245)
T d2ag5a1          75 LDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQ-KSGNIINMSSVASSVKG-------------  140 (245)
T ss_dssp             CSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCSBTTTBC-------------
T ss_pred             ceeEEecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccC-CCceeeeeechhhccCC-------------
Confidence            9999999998765 58889999999999999999999999999999887 67999999998774321             


Q ss_pred             hhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC----
Q 022103          187 ELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ----  262 (302)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~----  262 (302)
                                                  .+.+.+|+++|+|+++|+|+||.|++++|||||+|+||+|+|+|....    
T Consensus       141 ----------------------------~~~~~~Y~~sKaal~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~  192 (245)
T d2ag5a1         141 ----------------------------VVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQAR  192 (245)
T ss_dssp             ----------------------------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHS
T ss_pred             ----------------------------ccchhHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeceeechhhHhhhhhh
Confidence                                        123478999999999999999999999999999999999999885421    


Q ss_pred             -----------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          263 -----------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       263 -----------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                                       +..+|+|+|..+.+|++ +...+++|+.+..||++.
T Consensus       193 ~~~~~~~~~~~~~~pl~R~~~pedva~~v~fL~s-~~s~~iTG~~i~VDGG~s  244 (245)
T d2ag5a1         193 GNPEEARNDFLKRQKTGRFATAEEIAMLCVYLAS-DESAYVTGNPVIIDGGWS  244 (245)
T ss_dssp             SSHHHHHHHHHHTCTTSSCEEHHHHHHHHHHHHS-GGGTTCCSCEEEECTTGG
T ss_pred             hhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC-hhhCCCcCceEEeCCCcC
Confidence                             23579999999999997 778899999999999864

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.2e-39  Score=290.76  Aligned_cols=207  Identities=25%  Similarity=0.277  Sum_probs=175.0

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcCCEEEEE---ecChh---hHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHH
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELGLTVILT---ARDVE---RGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFK  102 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G~~V~l~---~r~~~---~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~  102 (302)
                      +.|+||||||++|||+++|+.|+++|++|+++   .|+.+   ++++..+++...+.++..+.+|++|.++++++++++.
T Consensus         1 ~kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~   80 (285)
T d1jtva_           1 ARTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVT   80 (285)
T ss_dssp             CCEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT
T ss_pred             CCCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhcc
Confidence            36899999999999999999999999875554   45443   4555666666667899999999999999999999875


Q ss_pred             hhCCCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCccccc
Q 022103          103 SNFAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKS  181 (302)
Q Consensus       103 ~~~g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~  181 (302)
                      +  |.+|+||||+|.... ++.+.+.++|+.++++|+.|+++++++++|+|.++ +.|+||++||.++..+.+.      
T Consensus        81 ~--g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~-~~G~Iv~isS~~g~~~~~~------  151 (285)
T d1jtva_          81 E--GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRR-GSGRVLVTGSVGGLMGLPF------  151 (285)
T ss_dssp             T--SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEEEGGGTSCCTT------
T ss_pred             c--cchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHc-CCCceEEEechhhcCCCCC------
Confidence            4  789999999998755 67889999999999999999999999999999887 5799999999999866433      


Q ss_pred             ccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCC
Q 022103          182 ILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG  261 (302)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~  261 (302)
                                                          +.+|++||+|+++|+++|+.|++++|||||+|+||+|+|+|+.+
T Consensus       152 ------------------------------------~~~Y~asKaal~~l~~~la~El~~~gIrVn~V~PG~v~T~~~~~  195 (285)
T d1jtva_         152 ------------------------------------NDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEK  195 (285)
T ss_dssp             ------------------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-----
T ss_pred             ------------------------------------chHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCCChHHHH
Confidence                                                47899999999999999999999999999999999999999876


Q ss_pred             CC--------------------------------CCCHHHHHHHHHHHhhc
Q 022103          262 QG--------------------------------SHTADEAADVGARLLLL  280 (302)
Q Consensus       262 ~~--------------------------------~~~~~~~a~~~~~l~~~  280 (302)
                      ..                                ..+||++|+.+++++..
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PeeVA~~v~~~~~~  246 (285)
T d1jtva_         196 VLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNPEEVAEVFLTALRA  246 (285)
T ss_dssp             --CCHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHCBCHHHHHHHHHHHHHC
T ss_pred             hccCHHHHhhccchhHHHHHHHHHHHHhhhhcccCCCHHHHHHHHHHHHhC
Confidence            42                                24799999999999863

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.7e-37  Score=273.34  Aligned_cols=218  Identities=21%  Similarity=0.278  Sum_probs=188.8

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      +++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.   .....+.+|+.+.++++..+.++...++
T Consensus         2 slkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (248)
T d2o23a1           2 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLG---NNCVFAPADVTSEKDVQTALALAKGKFG   78 (248)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHC---TTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhC---CCcccccccccccccccccccccccccc
Confidence            6899999999999999999999999999999999999999998888874   4788999999999999999999999989


Q ss_pred             CccEEEEcCCCCCC-------CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcC-----CCCCcEEEecCCCcccccc
Q 022103          107 ALDILVNNAGVSFN-------DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRS-----PSKSRILNISSRLGTLSKV  174 (302)
Q Consensus       107 ~id~lv~~aG~~~~-------~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~-----~~~~~iv~vsS~~~~~~~~  174 (302)
                      .+|.++++++....       ++.+.+.+.|++++++|+.+++++++++.|.|...     ...|+||++||..+..+.+
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~  158 (248)
T d2o23a1          79 RVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQV  158 (248)
T ss_dssp             CCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCT
T ss_pred             cccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhccCCC
Confidence            99999999875432       35677889999999999999999999999998654     2457999999999876543


Q ss_pred             cCcccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcc
Q 022103          175 RNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFT  254 (302)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v  254 (302)
                      .                                          +.+|++||+|+++|+++||.|++++|||||+|+||++
T Consensus       159 ~------------------------------------------~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i  196 (248)
T d2o23a1         159 G------------------------------------------QAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLF  196 (248)
T ss_dssp             T------------------------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCB
T ss_pred             C------------------------------------------chHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCce
Confidence            2                                          4789999999999999999999999999999999999


Q ss_pred             cCCCCCCCC----------------CCCHHHHHHHHHHHhhcCCCCCCCcceee
Q 022103          255 QTSMTQGQG----------------SHTADEAADVGARLLLLHPQQLPTAKFYI  292 (302)
Q Consensus       255 ~T~~~~~~~----------------~~~~~~~a~~~~~l~~~~~~~~~~G~~~~  292 (302)
                      +|+|...+.                ..+|+|+|..+++|++   ..+++|+++-
T Consensus       197 ~T~~~~~~~~~~~~~~~~~~pl~~R~g~peevA~~v~fL~s---~~~itGq~I~  247 (248)
T d2o23a1         197 GTPLLTSLPEKVCNFLASQVPFPSRLGDPAEYAHLVQAIIE---NPFLNGEVIR  247 (248)
T ss_dssp             CCC----------CHHHHTCSSSCSCBCHHHHHHHHHHHHH---CTTCCSCEEE
T ss_pred             ecchhhcCCHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHHh---CCCCCceEeE
Confidence            999977542                2479999999999986   3589999763

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.7e-37  Score=274.44  Aligned_cols=209  Identities=25%  Similarity=0.353  Sum_probs=186.5

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhh-CCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSE-KGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      ++||+||||||++|||+++|+.|+++|++|++++|+.++++++.+++.+ .+..+..+.+|+++.+.+..+++.+...++
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g   91 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMG   91 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHhC
Confidence            8999999999999999999999999999999999999999999888764 456788999999999999999999999999


Q ss_pred             CccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccch
Q 022103          107 ALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILED  185 (302)
Q Consensus       107 ~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~  185 (302)
                      .+|++++|||.... .+.+.+.++|+.++++|+.+++.+++.++|.|+++  .|+||++||.++..+.+           
T Consensus        92 ~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~--~G~ii~isS~~~~~~~p-----------  158 (269)
T d1xu9a_          92 GLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS--NGSIVVVSSLAGKVAYP-----------  158 (269)
T ss_dssp             SCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEEEGGGTSCCT-----------
T ss_pred             CccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhc--CCcceEeccchhcCCCC-----------
Confidence            99999999998755 57888999999999999999999999999999864  69999999999876643           


Q ss_pred             hhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHcc--CCCcEEEEeecCcccCCCCCCC-
Q 022103          186 EELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYE--GEGISVNSYCPGFTQTSMTQGQ-  262 (302)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~--~~gI~V~~v~PG~v~T~~~~~~-  262 (302)
                                                     ++.+|++||+|+++|+++|+.|++  ..||+|++|+||+|+|+|.... 
T Consensus       159 -------------------------------~~~~Y~asKaal~~~~~~La~El~~~~~~I~V~~v~PG~v~T~~~~~~~  207 (269)
T d1xu9a_         159 -------------------------------MVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAV  207 (269)
T ss_dssp             -------------------------------TCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHHS
T ss_pred             -------------------------------CchHHHHHHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCcHHHHhc
Confidence                                           347899999999999999999986  4579999999999999985432 


Q ss_pred             ------CCCCHHHHHHHHHHHhhc
Q 022103          263 ------GSHTADEAADVGARLLLL  280 (302)
Q Consensus       263 ------~~~~~~~~a~~~~~l~~~  280 (302)
                            ...++|++|..++.....
T Consensus       208 ~~~~~~~~~~~e~~a~~i~~~~~~  231 (269)
T d1xu9a_         208 SGIVHMQAAPKEECALEIIKGGAL  231 (269)
T ss_dssp             CGGGGGGCBCHHHHHHHHHHHHHT
T ss_pred             cCCccccCCCHHHHHHHHHHHhhc
Confidence                  236799999998887653

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2.7e-35  Score=261.45  Aligned_cols=224  Identities=17%  Similarity=0.168  Sum_probs=193.7

Q ss_pred             ccCcEEEEeCCCc--hHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           28 SKETIAIVTGANK--GIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        28 ~~~k~vlItGas~--gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      ++||++|||||++  |||+++|+.|+++|++|++++|+.+..+.+ +++.........+..|+++..++...+.++...+
T Consensus         3 L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (258)
T d1qsga_           3 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRV-EEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVW   81 (258)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHH-HHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTC
T ss_pred             CCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHHHhhcCCcceeecccchHHHHHHHHHHhhhcc
Confidence            7899999999998  899999999999999999999997655544 4444445577889999999999999999999999


Q ss_pred             CCccEEEEcCCCCCC-C-----CCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCccc
Q 022103          106 AALDILVNNAGVSFN-D-----IYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNI  179 (302)
Q Consensus       106 g~id~lv~~aG~~~~-~-----~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~  179 (302)
                      +.+|++|||++.... .     ......+.|...+.+|+.+.+.+++.+.+.+.+.   +.|+++||..+..+.+     
T Consensus        82 ~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~Ii~iss~~~~~~~~-----  153 (258)
T d1qsga_          82 PKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPG---SALLTLSYLGAERAIP-----  153 (258)
T ss_dssp             SSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE---EEEEEEECGGGTSBCT-----
T ss_pred             cccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCC---cEEEEecchhhccCCC-----
Confidence            999999999987643 1     2456778899999999999999999999998654   6799999987765432     


Q ss_pred             ccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCC
Q 022103          180 KSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMT  259 (302)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~  259 (302)
                                                           .+..|++||+|+++|++++|.|++++|||||+|+||+|+|+|.
T Consensus       154 -------------------------------------~~~~Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~  196 (258)
T d1qsga_         154 -------------------------------------NYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAA  196 (258)
T ss_dssp             -------------------------------------TTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTG
T ss_pred             -------------------------------------CcHHHHHHHHHHHHHHHHHHHHhCccCceeecccccccccccc
Confidence                                                 2477999999999999999999999999999999999999997


Q ss_pred             CCCC-----------------CCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          260 QGQG-----------------SHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       260 ~~~~-----------------~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                      ....                 ..+|||+|..+.+|++ +...+++|+.+..||++.
T Consensus       197 ~~~~~~~~~~~~~~~~~pl~R~~~peeia~~v~fL~s-~~s~~itG~~i~vDGG~~  251 (258)
T d1qsga_         197 SGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCS-DLSAGISGEVVHVDGGFS  251 (258)
T ss_dssp             GGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHTS-GGGTTCCSCEEEESTTGG
T ss_pred             cccchhhhHHHHHHhCCCCCCCcCHHHHHHHHHHHhC-chhcCccCceEEECcCHH
Confidence            7542                 3689999999999997 678899999999999864

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=1.9e-35  Score=272.26  Aligned_cols=225  Identities=15%  Similarity=0.196  Sum_probs=185.5

Q ss_pred             cCcEEEEeC--CCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCC------------CceeEE----------
Q 022103           29 KETIAIVTG--ANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKG------------LPVNFF----------   84 (302)
Q Consensus        29 ~~k~vlItG--as~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~------------~~~~~~----------   84 (302)
                      ++|++||||  +++|||+++|++|+++|++|++.+++............+.-            ......          
T Consensus         1 n~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (329)
T d1uh5a_           1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN   80 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGG
T ss_pred             CCcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhc
Confidence            479999999  55799999999999999999999998766554444332210            011222          


Q ss_pred             ----------EeeCCCHHHHHHHHHHHHhhCCCccEEEEcCCCCCC---CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhh
Q 022103           85 ----------QLDVSDPSSIEAFVSWFKSNFAALDILVNNAGVSFN---DIYKNTVEHAETVIRTNFYGAKLLTESLLPL  151 (302)
Q Consensus        85 ----------~~Dlt~~~~~~~~~~~~~~~~g~id~lv~~aG~~~~---~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~  151 (302)
                                .+|+++.++++++++++.++||+||+||||+|....   ++.+.+.++|++++++|+++.+.++|+++|+
T Consensus        81 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~  160 (329)
T d1uh5a_          81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNI  160 (329)
T ss_dssp             GCCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred             ccchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhh
Confidence                      247778888999999999999999999999997642   5788999999999999999999999999999


Q ss_pred             hhcCCCCCcEEEecCCCcccccccCcccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHH
Q 022103          152 FRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAY  231 (302)
Q Consensus       152 l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~  231 (302)
                      |++   .|+||++||..+..+.                                         |.+...|+++|+|+++|
T Consensus       161 m~~---~GsIv~iss~~~~~~~-----------------------------------------p~y~~~y~asKaal~~l  196 (329)
T d1uh5a_         161 MKP---QSSIISLTYHASQKVV-----------------------------------------PGYGGGMSSAKAALESD  196 (329)
T ss_dssp             EEE---EEEEEEEECGGGTSCC-----------------------------------------TTCTTTHHHHHHHHHHH
T ss_pred             ccc---ccccccceeehhcccc-----------------------------------------cccchhhhhhhcccccc
Confidence            965   4899999998776443                                         33446799999999999


Q ss_pred             HHHHHHHccC-CCcEEEEeecCcccCCCCCC-------------------------------------------------
Q 022103          232 TMVLAKRYEG-EGISVNSYCPGFTQTSMTQG-------------------------------------------------  261 (302)
Q Consensus       232 ~~~la~e~~~-~gI~V~~v~PG~v~T~~~~~-------------------------------------------------  261 (302)
                      +|+||.|+++ +|||||+|+||+|+|++.+.                                                 
T Consensus       197 tr~lA~Ela~~~gIRVNaI~PG~i~T~a~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (329)
T d1uh5a_         197 TRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYENNTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDY  276 (329)
T ss_dssp             HHHHHHHHHHHHCCEEEEEEECCCCCTTGGGCC------------------------------------------CHHHH
T ss_pred             chhhHHHHhcccCcEEEEEecCcccchhhhcccchhhhhhhhhhhhhccccccccccccccccccchhhhhhhcccchHH
Confidence            9999999986 69999999999999943221                                                 


Q ss_pred             -----------CCCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          262 -----------QGSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       262 -----------~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                                 .+..+|+|+|..+++|++ +...+++|+.+..||++.
T Consensus       277 ~~~~~~~~~Pl~R~~~pedvA~~v~fLaS-d~s~~iTGq~i~VDGG~~  323 (329)
T d1uh5a_         277 AIEYSEKYAPLRQKLLSTDIGSVASFLLS-RESRAITGQTIYVDNGLN  323 (329)
T ss_dssp             HHHHHHHHSSSCSCCCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGG
T ss_pred             HHHHHhccCCCCCCcCHHHHHHHHHHHhC-chhCCccCCeEEECCCcc
Confidence                       023689999999999997 788999999999999974

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=100.00  E-value=7.3e-35  Score=261.57  Aligned_cols=226  Identities=20%  Similarity=0.182  Sum_probs=178.7

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHcCCEEEEEecC-hhhHHHHHHHHhhCC-Ccee-----------------EEEeeCCCH
Q 022103           31 TIAIVTGANKGIGFALVKRLAELGLTVILTARD-VERGQRAVESLSEKG-LPVN-----------------FFQLDVSDP   91 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~-~~~~~~~~~~l~~~~-~~~~-----------------~~~~Dlt~~   91 (302)
                      +++|||||++|||+++|++|+++|++|++.+|+ .++.+...+++.+.+ ....                 .+.+|++++
T Consensus         3 pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~~   82 (284)
T d1e7wa_           3 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLF   82 (284)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCCH
Confidence            689999999999999999999999999988765 456677777776532 2333                 345679999


Q ss_pred             HHHHHHHHHHHhhCCCccEEEEcCCCCCC-CCCCCCHHHHH--------------HHHHhhhhHHHHHHHHHhhhhhc--
Q 022103           92 SSIEAFVSWFKSNFAALDILVNNAGVSFN-DIYKNTVEHAE--------------TVIRTNFYGAKLLTESLLPLFRR--  154 (302)
Q Consensus        92 ~~~~~~~~~~~~~~g~id~lv~~aG~~~~-~~~~~~~e~~~--------------~~~~vn~~~~~~l~~~~~~~l~~--  154 (302)
                      ++++++++++.+++|++|+||||||...+ ++.+.+.++|+              .++.+|+.+++++++.+.+.+..  
T Consensus        83 ~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~  162 (284)
T d1e7wa_          83 TRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTP  162 (284)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSC
T ss_pred             HHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhhH
Confidence            99999999999999999999999998754 45555555543              57899999999999998876532  


Q ss_pred             ---CCCCCcEEEecCCCcccccccCcccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHH
Q 022103          155 ---SPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAY  231 (302)
Q Consensus       155 ---~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~  231 (302)
                         +...++|++++|.....+.+                                          ++.+|++||+|+++|
T Consensus       163 ~~~~~~~~~ii~~~s~~~~~~~~------------------------------------------~~~~Y~asKaal~~l  200 (284)
T d1e7wa_         163 AKHRGTNYSIINMVDAMTNQPLL------------------------------------------GYTIYTMAKGALEGL  200 (284)
T ss_dssp             GGGSCSCEEEEEECCTTTTSCCT------------------------------------------TCHHHHHHHHHHHHH
T ss_pred             HHhcCCCCcccccccccccCCcc------------------------------------------ceeeeccccccchhh
Confidence               22457899998888765532                                          247899999999999


Q ss_pred             HHHHHHHccCCCcEEEEeecCcccCCCCCC--------------CCCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          232 TMVLAKRYEGEGISVNSYCPGFTQTSMTQG--------------QGSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       232 ~~~la~e~~~~gI~V~~v~PG~v~T~~~~~--------------~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                      +++||.|++++|||||+|+||++.+.....              .+..+|+|+|+.+++|++ +...+++|+.+..||++
T Consensus       201 t~~lA~el~~~gIrvN~I~PG~t~~~~~~~~~~~~~~~~~~pl~~R~~~peeiA~~v~fL~S-~~s~~itG~~i~VDGG~  279 (284)
T d1e7wa_         201 TRSAALELAPLQIRVNGVGPGLSVLVDDMPPAVWEGHRSKVPLYQRDSSAAEVSDVVIFLCS-SKAKYITGTCVKVDGGY  279 (284)
T ss_dssp             HHHHHHHHGGGTEEEEEEEESSBCCGGGSCHHHHHHHHTTCTTTTSCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTG
T ss_pred             hHHHHHHhCCccccccccccccccccccCCHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhC-chhcCccCCeEEECcCh
Confidence            999999999999999999999865533211              123579999999999997 67889999999999997


Q ss_pred             cC
Q 022103          298 VK  299 (302)
Q Consensus       298 ~~  299 (302)
                      ..
T Consensus       280 sl  281 (284)
T d1e7wa_         280 SL  281 (284)
T ss_dssp             GG
T ss_pred             hc
Confidence            64

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=2.9e-34  Score=259.40  Aligned_cols=230  Identities=19%  Similarity=0.199  Sum_probs=185.9

Q ss_pred             ccccccCcEEEEeCCCc--hHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhC---------CC--ce-eEEEee--
Q 022103           24 TKWWSKETIAIVTGANK--GIGFALVKRLAELGLTVILTARDVERGQRAVESLSEK---------GL--PV-NFFQLD--   87 (302)
Q Consensus        24 ~~~~~~~k~vlItGas~--gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~---------~~--~~-~~~~~D--   87 (302)
                      ++++|+||++|||||+|  |||+++|++|+++|++|++.+|+..............         +.  .. ....+|  
T Consensus         2 ~~~~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (297)
T d1d7oa_           2 LPIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAV   81 (297)
T ss_dssp             CCCCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTT
T ss_pred             CCcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhh
Confidence            46889999999999876  9999999999999999999999875444333322211         00  11 233333  


Q ss_pred             ------------------CCCHHHHHHHHHHHHhhCCCccEEEEcCCCCC---CCCCCCCHHHHHHHHHhhhhHHHHHHH
Q 022103           88 ------------------VSDPSSIEAFVSWFKSNFAALDILVNNAGVSF---NDIYKNTVEHAETVIRTNFYGAKLLTE  146 (302)
Q Consensus        88 ------------------lt~~~~~~~~~~~~~~~~g~id~lv~~aG~~~---~~~~~~~~e~~~~~~~vn~~~~~~l~~  146 (302)
                                        .++..+++++++++.++||+||+||||||...   .++.+.+.++|++++++|+++.+++++
T Consensus        82 ~~~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~  161 (297)
T d1d7oa_          82 FDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLS  161 (297)
T ss_dssp             CCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             ccccccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhh
Confidence                              35566778999999999999999999999753   257889999999999999999999999


Q ss_pred             HHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHH
Q 022103          147 SLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKL  226 (302)
Q Consensus       147 ~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~  226 (302)
                      ++++.+.++   ++++++++.......                                         ++....|+++|+
T Consensus       162 ~~~~~~~~~---g~~~~~~~~~~~~~~-----------------------------------------~~~~~~y~~aKa  197 (297)
T d1d7oa_         162 HFLPIMNPG---GASISLTYIASERII-----------------------------------------PGYGGGMSSAKA  197 (297)
T ss_dssp             HHGGGEEEE---EEEEEEECGGGTSCC-----------------------------------------TTCTTTHHHHHH
T ss_pred             HHHHHhhcC---Ccceeeeehhhcccc-----------------------------------------cccccceecccc
Confidence            999998765   666776665543221                                         223467999999


Q ss_pred             HHHHHHHHHHHHcc-CCCcEEEEeecCcccCCCCCCCC-----------------CCCHHHHHHHHHHHhhcCCCCCCCc
Q 022103          227 ALNAYTMVLAKRYE-GEGISVNSYCPGFTQTSMTQGQG-----------------SHTADEAADVGARLLLLHPQQLPTA  288 (302)
Q Consensus       227 a~~~~~~~la~e~~-~~gI~V~~v~PG~v~T~~~~~~~-----------------~~~~~~~a~~~~~l~~~~~~~~~~G  288 (302)
                      ++.++++.++.+++ ++|||||+|+||+++|++.....                 ..+|||+|..+++|++ +...+++|
T Consensus       198 a~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~PlgR~~~peevA~~v~fL~S-~~a~~itG  276 (297)
T d1d7oa_         198 ALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFIDTMIEYSYNNAPIQKTLTADEVGNAAAFLVS-PLASAITG  276 (297)
T ss_dssp             HHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSHHHHHHHHHHHHSSSCCCBCHHHHHHHHHHHTS-GGGTTCCS
T ss_pred             cccccccccchhccccceEEecccccccccchhhhhccCCHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhC-chhcCCcC
Confidence            99999999999996 57999999999999999987642                 3679999999999997 78889999


Q ss_pred             ceeecCCccc
Q 022103          289 KFYIGLDPFV  298 (302)
Q Consensus       289 ~~~~~~~~~~  298 (302)
                      +.+..||++.
T Consensus       277 q~i~vDGG~s  286 (297)
T d1d7oa_         277 ATIYVDNGLN  286 (297)
T ss_dssp             CEEEESTTGG
T ss_pred             ceEEECcCHh
Confidence            9999999864

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=100.00  E-value=7e-34  Score=254.36  Aligned_cols=224  Identities=18%  Similarity=0.230  Sum_probs=181.9

Q ss_pred             ccCcEEEEeCCCc--hHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           28 SKETIAIVTGANK--GIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        28 ~~~k~vlItGas~--gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      |+||++|||||+|  |||+++|++|+++|++|++++|+. ++++.++++.+.+....++.+|++++++++++++++.+.+
T Consensus         3 L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~-~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   81 (274)
T d2pd4a1           3 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNE-SLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDL   81 (274)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESST-TTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCH-HHHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHHc
Confidence            7899999999865  999999999999999999999985 4555667777667788899999999999999999999999


Q ss_pred             CCccEEEEcCCCCCC-----CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccc
Q 022103          106 AALDILVNNAGVSFN-----DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIK  180 (302)
Q Consensus       106 g~id~lv~~aG~~~~-----~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~  180 (302)
                      |.+|++|+|+|....     ...+...+.+...+.++.++.+.+.+.+.+....   .+.|+++++.+...+        
T Consensus        82 g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~i~~~s~~~~~~~--------  150 (274)
T d2pd4a1          82 GSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNN---GASVLTLSYLGSTKY--------  150 (274)
T ss_dssp             SCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEEECGGGTSB--------
T ss_pred             CCCCeEEeecccccccccccccccccchhhhhhhcccccccccccccccccccc---Ccceeeecccccccc--------
Confidence            999999999997643     2334455566666666666666676766665432   244555555443322        


Q ss_pred             cccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCC
Q 022103          181 SILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQ  260 (302)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~  260 (302)
                                                        ++....|+++|+|+++++++++.|++++|||||+|+||++.|+|..
T Consensus       151 ----------------------------------~~~~~~y~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~  196 (274)
T d2pd4a1         151 ----------------------------------MAHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASS  196 (274)
T ss_dssp             ----------------------------------CTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGG
T ss_pred             ----------------------------------cccchhhhHHHHHHHHHHHhhHHHhcCcCceecccccCcccCcccc
Confidence                                              2224679999999999999999999999999999999999999976


Q ss_pred             CC-----------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          261 GQ-----------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       261 ~~-----------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                      ..                 +..+|+|+|..+.+|++ +...+++|+.+..||++.
T Consensus       197 ~~~~~~~~~~~~~~~~p~~r~~~pedIA~~v~fL~S-~~s~~itG~~i~vDGG~~  250 (274)
T d2pd4a1         197 GIADFRMILKWNEINAPLRKNVSLEEVGNAGMYLLS-SLSSGVSGEVHFVDAGYH  250 (274)
T ss_dssp             GSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGG
T ss_pred             ccCchHHHHHHHhhhhhccCCcCHHHHHHHHHHHhC-hhhCCCcCceEEECCChh
Confidence            54                 23789999999999997 678899999999999874

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=6e-35  Score=256.86  Aligned_cols=209  Identities=10%  Similarity=0.045  Sum_probs=175.7

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC--C
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF--A  106 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~--g  106 (302)
                      +||+||||||++|||+++|+.|+++|++|++++++..+          .........+|.++.++++.+...+.+.+  +
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   70 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENE----------EASASVIVKMTDSFTEQADQVTAEVGKLLGDQ   70 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCT----------TSSEEEECCCCSCHHHHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccc----------cccccceeecccCcHHHHHHHHHHHHHHhCCC
Confidence            58999999999999999999999999999999987643          12244667788888888888888887754  4


Q ss_pred             CccEEEEcCCCCC--CCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccc
Q 022103          107 ALDILVNNAGVSF--NDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILE  184 (302)
Q Consensus       107 ~id~lv~~aG~~~--~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~  184 (302)
                      ++|+||||||...  ..+.+.+.+.|++++++|+.+.++++++++|+|++   .|+||++||.++..+.+          
T Consensus        71 ~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~---~G~Iv~isS~~~~~~~~----------  137 (236)
T d1dhra_          71 KVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE---GGLLTLAGAKAALDGTP----------  137 (236)
T ss_dssp             CEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEECCGGGGSCCT----------
T ss_pred             CceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhccc---ccceeEEccHHHcCCcc----------
Confidence            7999999999643  24567778999999999999999999999999975   39999999998875532          


Q ss_pred             hhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHcc--CCCcEEEEeecCcccCCCCCCC
Q 022103          185 DEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYE--GEGISVNSYCPGFTQTSMTQGQ  262 (302)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~--~~gI~V~~v~PG~v~T~~~~~~  262 (302)
                                                      ++.+|++||+|+++|+++||.|++  ++|||||+|+||+|+|+|.+..
T Consensus       138 --------------------------------~~~~Y~asKaal~~lt~~la~El~~~~~gI~vn~v~PG~v~T~~~~~~  185 (236)
T d1dhra_         138 --------------------------------GMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKS  185 (236)
T ss_dssp             --------------------------------TBHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHH
T ss_pred             --------------------------------CCcccHHHHHHHHHHHHHHHHHhccCCCcEEEEEEEeccCcCCcchhh
Confidence                                            247899999999999999999997  5799999999999999996542


Q ss_pred             -------CCCCHHHHHHHHHHHhhcCCCCCCCcceeec
Q 022103          263 -------GSHTADEAADVGARLLLLHPQQLPTAKFYIG  293 (302)
Q Consensus       263 -------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~  293 (302)
                             ...+|+++|..+.+|+. +....++|.++..
T Consensus       186 ~~~~~~~~~~~pe~va~~~~~l~s-~~~~~i~G~~i~v  222 (236)
T d1dhra_         186 MPEADFSSWTPLEFLVETFHDWIT-GNKRPNSGSLIQV  222 (236)
T ss_dssp             STTSCGGGSEEHHHHHHHHHHHHT-TTTCCCTTCEEEE
T ss_pred             CccchhhcCCCHHHHHHHHHHHhC-CCccCCCCCeEEE
Confidence                   22569999999999987 5666789986643

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=2.4e-34  Score=252.62  Aligned_cols=208  Identities=13%  Similarity=0.066  Sum_probs=173.0

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHh--hCCCc
Q 022103           31 TIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKS--NFAAL  108 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~--~~g~i  108 (302)
                      ++||||||++|||+++|++|+++|++|++++|+.++.          ........+|+.+.++.....+.+..  ++++|
T Consensus         3 gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i   72 (235)
T d1ooea_           3 GKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQ----------ADSNILVDGNKNWTEQEQSILEQTASSLQGSQV   72 (235)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTT----------SSEEEECCTTSCHHHHHHHHHHHHHHHHTTCCE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhc----------ccccceeccccCchhHHHHHHHHHHHHhcCCCe
Confidence            4579999999999999999999999999999987431          12345666888888888777777776  45899


Q ss_pred             cEEEEcCCCCCC--CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchh
Q 022103          109 DILVNNAGVSFN--DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDE  186 (302)
Q Consensus       109 d~lv~~aG~~~~--~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~  186 (302)
                      |+||||||....  .+.+.+.+.|+.++++|+.++++++++++|+|++.   ++||++||..+..+.             
T Consensus        73 D~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~---g~Iv~isS~~~~~~~-------------  136 (235)
T d1ooea_          73 DGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPG---GLLQLTGAAAAMGPT-------------  136 (235)
T ss_dssp             EEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE---EEEEEECCGGGGSCC-------------
T ss_pred             eEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccc---eEEEEeccHHhcCCc-------------
Confidence            999999997533  45666678899999999999999999999999754   899999998887553             


Q ss_pred             hhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHcc--CCCcEEEEeecCcccCCCCCCC--
Q 022103          187 ELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYE--GEGISVNSYCPGFTQTSMTQGQ--  262 (302)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~--~~gI~V~~v~PG~v~T~~~~~~--  262 (302)
                                                   +++.+|++||+|+++|+++|+.|++  ..+|+||.|+||+++|+|.+..  
T Consensus       137 -----------------------------~~~~~Y~asKaal~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~~~~~~~~  187 (235)
T d1ooea_         137 -----------------------------PSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWMP  187 (235)
T ss_dssp             -----------------------------TTBHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHST
T ss_pred             -----------------------------ccccchHHHHHHHHHHHHHHHHHhccCCCceEEEEEecCcCcCcchhhhCc
Confidence                                         2358899999999999999999997  4699999999999999986543  


Q ss_pred             -----CCCCHHHHHHHHHHHhhcCCCCCCCcceeec
Q 022103          263 -----GSHTADEAADVGARLLLLHPQQLPTAKFYIG  293 (302)
Q Consensus       263 -----~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~  293 (302)
                           ...+|+++++.++.++..+....++|+++..
T Consensus       188 ~~~~~~~~~~~~va~~~~~~l~~~~~~~~tG~~i~v  223 (235)
T d1ooea_         188 NADHSSWTPLSFISEHLLKWTTETSSRPSSGALLKI  223 (235)
T ss_dssp             TCCGGGCBCHHHHHHHHHHHHHCGGGCCCTTCEEEE
T ss_pred             CCccccCCCHHHHHHHHHHHhcCccccCCCceEEEE
Confidence                 2367999999998777656667799998876

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=3.5e-33  Score=244.58  Aligned_cols=211  Identities=23%  Similarity=0.242  Sum_probs=177.4

Q ss_pred             CcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCcc
Q 022103           30 ETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALD  109 (302)
Q Consensus        30 ~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id  109 (302)
                      .|++|||||++|||+++|++|+++|++|++++|+.+            +.+...+.+|+++...+..+......... .+
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~------------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~-~~   67 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE------------GEDLIYVEGDVTREEDVRRAVARAQEEAP-LF   67 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC------------SSSSEEEECCTTCHHHHHHHHHHHHHHSC-EE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcc------------cccceEeeccccchhhhHHHHHhhhcccc-cc
Confidence            489999999999999999999999999999999863            24678889999999999999888877654 45


Q ss_pred             EEEEcCCCCCC-----CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcC-----CCCCcEEEecCCCcccccccCccc
Q 022103          110 ILVNNAGVSFN-----DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRS-----PSKSRILNISSRLGTLSKVRNPNI  179 (302)
Q Consensus       110 ~lv~~aG~~~~-----~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~-----~~~~~iv~vsS~~~~~~~~~~~~~  179 (302)
                      .++.+++....     .....+.+.|++++++|+.+.+.+++.+.+.+...     .+.|+||++||..+..+.+.    
T Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~~----  143 (241)
T d1uaya_          68 AVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIG----  143 (241)
T ss_dssp             EEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTT----
T ss_pred             chhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccCCCC----
Confidence            56666654321     34567889999999999999999999999985433     15689999999998766433    


Q ss_pred             ccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCC
Q 022103          180 KSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMT  259 (302)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~  259 (302)
                                                            +.+|+++|+|+++|+++||.|++++|||||+|+||+|+|+|.
T Consensus       144 --------------------------------------~~~Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~  185 (241)
T d1uaya_         144 --------------------------------------QAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLL  185 (241)
T ss_dssp             --------------------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHH
T ss_pred             --------------------------------------chhhHHHHHHHHHHHHHHHHHHhhcCCceeeecCCccccccc
Confidence                                                  478999999999999999999999999999999999999886


Q ss_pred             CCC----------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCccc
Q 022103          260 QGQ----------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFV  298 (302)
Q Consensus       260 ~~~----------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~  298 (302)
                      ...                +..+|||+|..+++|++   ..+++|+.+..||+..
T Consensus       186 ~~~~~~~~~~~~~~~~~~~R~g~pedvA~~v~fL~s---~~~iTG~~i~VDGG~~  237 (241)
T d1uaya_         186 QGLPEKAKASLAAQVPFPPRLGRPEEYAALVLHILE---NPMLNGEVVRLDGALR  237 (241)
T ss_dssp             HTSCHHHHHHHHTTCCSSCSCCCHHHHHHHHHHHHH---CTTCCSCEEEESTTCC
T ss_pred             chhhhhHHHHHHhcCCCCCCCcCHHHHHHHHHHHHh---CCCCCCCEEEECCccc
Confidence            543                23589999999999987   2589999999999854

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=100.00  E-value=1.5e-32  Score=243.98  Aligned_cols=228  Identities=21%  Similarity=0.242  Sum_probs=182.0

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhh-HHHHHHHHhhC-CCceeEEEeeCC----CHHHHHHHHHHHHhh
Q 022103           31 TIAIVTGANKGIGFALVKRLAELGLTVILTARDVER-GQRAVESLSEK-GLPVNFFQLDVS----DPSSIEAFVSWFKSN  104 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~-~~~~~~~l~~~-~~~~~~~~~Dlt----~~~~~~~~~~~~~~~  104 (302)
                      +++|||||++|||+++|++|+++|++|++++|+.++ .+++.+++.+. +.+...+.+|+.    .++.++++++.+.++
T Consensus         2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (266)
T d1mxha_           2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRA   81 (266)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHH
Confidence            689999999999999999999999999999999765 46667777654 456666766554    367788888999999


Q ss_pred             CCCccEEEEcCCCCCC-CC-----------CCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCC----CCCcEEEecCCC
Q 022103          105 FAALDILVNNAGVSFN-DI-----------YKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSP----SKSRILNISSRL  168 (302)
Q Consensus       105 ~g~id~lv~~aG~~~~-~~-----------~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~----~~~~iv~vsS~~  168 (302)
                      +|.+|++|||||+..+ .+           .+...+.+...+.+|+.+.+.+.+.....+....    ..+.++++++..
T Consensus        82 ~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (266)
T d1mxha_          82 FGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAM  161 (266)
T ss_dssp             HSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCGG
T ss_pred             hCCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhhcc
Confidence            9999999999997643 11           2234566778899999999999988888775542    235677777766


Q ss_pred             cccccccCcccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEE
Q 022103          169 GTLSKVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNS  248 (302)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~  248 (302)
                      +..+.                                          +++..|++||+|+++|++++|.|++++|||||+
T Consensus       162 ~~~~~------------------------------------------~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~  199 (266)
T d1mxha_         162 TDLPL------------------------------------------PGFCVYTMAKHALGGLTRAAALELAPRHIRVNA  199 (266)
T ss_dssp             GGSCC------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEE
T ss_pred             ccccC------------------------------------------cchhhhhhhHHHHhhhHHHHHHHhCccCcEEEE
Confidence            54332                                          335889999999999999999999999999999


Q ss_pred             eecCcccCCCCCCC------------C--CCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcccCCC
Q 022103          249 YCPGFTQTSMTQGQ------------G--SHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVKSN  301 (302)
Q Consensus       249 v~PG~v~T~~~~~~------------~--~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~~  301 (302)
                      |+||+++|++....            +  ..+|||+|+.+++|++ +...+++|+.+..||++..+.
T Consensus       200 I~PG~i~t~~~~~~~~~~~~~~~~pl~r~~~~peeva~~v~fL~s-~~s~~itG~~i~vDGG~~l~~  265 (266)
T d1mxha_         200 VAPGLSLLPPAMPQETQEEYRRKVPLGQSEASAAQIADAIAFLVS-KDAGYITGTTLKVDGGLILAR  265 (266)
T ss_dssp             EEESSBSCCSSSCHHHHHHHHTTCTTTSCCBCHHHHHHHHHHHHS-GGGTTCCSCEEEESTTGGGCC
T ss_pred             eccCcEeccccCCHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhC-chhCCccCCeEEECccHhhhC
Confidence            99999999885541            1  2589999999999997 677889999999999987653

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=100.00  E-value=1.2e-32  Score=245.20  Aligned_cols=225  Identities=16%  Similarity=0.144  Sum_probs=185.8

Q ss_pred             ccCcEEEEeCC--CchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhh-
Q 022103           28 SKETIAIVTGA--NKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSN-  104 (302)
Q Consensus        28 ~~~k~vlItGa--s~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~-  104 (302)
                      |+||++|||||  ++|||+++|++|+++|++|++++|+.+++.+...  .+.+.+...+.+|+++++++..+++.+.+. 
T Consensus         4 l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~--~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~   81 (268)
T d2h7ma1           4 LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRIT--DRLPAKAPLLELDVQNEEHLASLAGRVTEAI   81 (268)
T ss_dssp             TTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHH--TTSSSCCCEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHH--HHcCCceeeEeeecccccccccccchhhhcc
Confidence            78999999995  5799999999999999999999999877643332  234567889999999999999999999765 


Q ss_pred             --CCCccEEEEcCCCCCC------CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccC
Q 022103          105 --FAALDILVNNAGVSFN------DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRN  176 (302)
Q Consensus       105 --~g~id~lv~~aG~~~~------~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~  176 (302)
                        ++.+|+++||+|....      ++.+.+.+.+...+.+|+.+.+...+.+.+.+..    +.+++++|.....+    
T Consensus        82 ~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~i~~~s~~~~~~----  153 (268)
T d2h7ma1          82 GAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNP----GGSIVGMDFDPSRA----  153 (268)
T ss_dssp             CTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE----EEEEEEEECCCSSC----
T ss_pred             ccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhccc----cccccccccccccc----
Confidence              4789999999997532      3567888999999999999999999999887643    33444444444322    


Q ss_pred             cccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccC
Q 022103          177 PNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQT  256 (302)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T  256 (302)
                                                            .+.+..|+++|+|+++|+++++.|++++|||||+|+||+|.|
T Consensus       154 --------------------------------------~p~~~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T  195 (268)
T d2h7ma1         154 --------------------------------------MPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRT  195 (268)
T ss_dssp             --------------------------------------CTTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCC
T ss_pred             --------------------------------------CcccchhhccccchhhccccchhhhhccCCcceEEecCCCCC
Confidence                                                  223578999999999999999999999999999999999999


Q ss_pred             CCCCC----------------------------CCCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcccCCC
Q 022103          257 SMTQG----------------------------QGSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPFVKSN  301 (302)
Q Consensus       257 ~~~~~----------------------------~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~~~~~  301 (302)
                      ++...                            .+..+|+|+|+.+.+|++ +...+++|+.+.+||+++.+=
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~rr~~~p~dva~~v~fL~S-d~a~~iTG~~i~vDGG~~~~~  267 (268)
T d2h7ma1         196 LAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDATPVAKTVCALLS-DWLPATTGDIIYADGGAHTQL  267 (268)
T ss_dssp             HHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTTCCCTTCCHHHHHHHHHHHS-SSCTTCCSEEEEESTTGGGCC
T ss_pred             hhhhhhccchhhhhhccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhC-chhcCccCCEEEECcCccccc
Confidence            86421                            124679999999999996 788899999999999998764

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.96  E-value=1.2e-29  Score=224.07  Aligned_cols=227  Identities=22%  Similarity=0.208  Sum_probs=163.2

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhh-CCCcc
Q 022103           31 TIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSN-FAALD  109 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~-~g~id  109 (302)
                      |+||||||++|||+++|++|+++|++|++++|+.++                 ..+|+.+.+..+....++..+ .+.+|
T Consensus         2 kVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~-----------------~~~d~~~~~~~~~~~~~~~~~~~~~id   64 (257)
T d1fjha_           2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE-----------------VIADLSTAEGRKQAIADVLAKCSKGMD   64 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS-----------------EECCTTSHHHHHHHHHHHHTTCTTCCS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHH-----------------HHHHhcCHHHHHHHHHHHHHHhCCCCc
Confidence            789999999999999999999999999999997532                 357899998888777666554 46799


Q ss_pred             EEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCccccc-ccCcccccccchhhh
Q 022103          110 ILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSK-VRNPNIKSILEDEEL  188 (302)
Q Consensus       110 ~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~-~~~~~~~~~~~~~~~  188 (302)
                      ++++|||+..      ..+.+.....+|+.+...+.+...+.+.+. ....+.++.+....... ...+          .
T Consensus        65 ~lv~~Ag~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~----------~  127 (257)
T d1fjha_          65 GLVLCAGLGP------QTKVLGNVVSVNYFGATELMDAFLPALKKG-HQPAAVVISSVASAHLAFDKNP----------L  127 (257)
T ss_dssp             EEEECCCCCT------TCSSHHHHHHHHTHHHHHHHHHHHHHHHTS-SSCEEEEECCGGGGSSCGGGCT----------T
T ss_pred             EEEEcCCCCC------cHHHHHHHHHHHHHHHHHHHHHhhhhhhhh-ccCcceeeeeccccchhhhhhh----------h
Confidence            9999999753      234577889999999999999999998877 45566666654332211 1110          0


Q ss_pred             cHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC------
Q 022103          189 SEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ------  262 (302)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~------  262 (302)
                      ........+..+.+.. ..    ...+++..+|++||+|+++|+|+||.||+++|||||+|+||+|+|+|.+..      
T Consensus       128 ~~~~~~g~~~~i~s~~-~~----~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~  202 (257)
T d1fjha_         128 ALALEAGEEAKARAIV-EH----AGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRY  202 (257)
T ss_dssp             HHHHHHTCHHHHHHHH-HT----CCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC---------------
T ss_pred             hhhccCCcEEEEeeeh-hc----cCCCcchHHHHHHhhhhhccccccccccccccccccccccCCcCChhHHhhcCCHHH
Confidence            0000011111111111 11    112334568999999999999999999999999999999999999997642      


Q ss_pred             ------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          263 ------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       263 ------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                                  +..+|+|+|..+.+|++ +...+++|+.+.+||++
T Consensus       203 ~~~~~~~~~PlgR~g~p~eva~~v~fL~S-~~s~~itG~~i~vDGG~  248 (257)
T d1fjha_         203 GESIAKFVPPMGRRAEPSEMASVIAFLMS-PAASYVHGAQIVIDGGI  248 (257)
T ss_dssp             ------CCCSTTSCCCTHHHHHHHHHHTS-GGGTTCCSCEEEESTTH
T ss_pred             HHHHHhcCCCCCCCcCHHHHHHHHHHHhC-chhCCccCceEEeCCCc
Confidence                        12579999999999997 67889999999999985

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.96  E-value=3.7e-29  Score=221.90  Aligned_cols=200  Identities=20%  Similarity=0.214  Sum_probs=166.0

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecCh---hhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhh
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELGL-TVILTARDV---ERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSN  104 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~~---~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~  104 (302)
                      +++++|||||++|||+++|++|+++|+ +|++++|+.   +..++..+++...+.++.++.||++|.++++++++++.+.
T Consensus         8 p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~~   87 (259)
T d2fr1a1           8 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDD   87 (259)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTT
T ss_pred             CcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhcccccc
Confidence            456999999999999999999999999 689999974   4567777788888889999999999999999999988665


Q ss_pred             CCCccEEEEcCCCCCC-CCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCccccccc
Q 022103          105 FAALDILVNNAGVSFN-DIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSIL  183 (302)
Q Consensus       105 ~g~id~lv~~aG~~~~-~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~  183 (302)
                       +++|.++||+|.... ++.+.+.++|+.++++|+.+.+++.+.+.+.     ..++||++||+.+..+.+.        
T Consensus        88 -~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~-----~~~~iv~~SS~a~~~g~~~--------  153 (259)
T d2fr1a1          88 -VPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTREL-----DLTAFVLFSSFASAFGAPG--------  153 (259)
T ss_dssp             -SCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTS-----CCSEEEEEEEHHHHTCCTT--------
T ss_pred             -ccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhcc-----CCceEeeecchhhccCCcc--------
Confidence             689999999998765 6788999999999999999999998875442     4689999999999877544        


Q ss_pred             chhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCC-CCCC-
Q 022103          184 EDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTS-MTQG-  261 (302)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~-~~~~-  261 (302)
                                                        +.+|+++|+++++|++.++.    .||+|++|+||.+.+. |... 
T Consensus       154 ----------------------------------~~~YaAaka~l~~la~~~~~----~Gi~v~~I~pg~~~~~g~~~~~  195 (259)
T d2fr1a1         154 ----------------------------------LGGYAPGNAYLDGLAQQRRS----DGLPATAVAWGTWAGSGMAEGP  195 (259)
T ss_dssp             ----------------------------------CTTTHHHHHHHHHHHHHHHH----TTCCCEEEEECCBC--------
T ss_pred             ----------------------------------cHHHHHHHHhHHHHHHHHHh----CCCCEEECCCCcccCCccccch
Confidence                                              37799999999998877765    5899999999988543 3222 


Q ss_pred             ---------CCCCCHHHHHHHHHHHhhc
Q 022103          262 ---------QGSHTADEAADVGARLLLL  280 (302)
Q Consensus       262 ---------~~~~~~~~~a~~~~~l~~~  280 (302)
                               ....++++++..+..++..
T Consensus       196 ~~~~~~~~G~~~~~~~~~~~~l~~~l~~  223 (259)
T d2fr1a1         196 VADRFRRHGVIEMPPETACRALQNALDR  223 (259)
T ss_dssp             ----CTTTTEECBCHHHHHHHHHHHHHT
T ss_pred             HHHHHHhcCCCCCCHHHHHHHHHHHHhC
Confidence                     1236899999999888863

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=99.83  E-value=1.5e-19  Score=166.48  Aligned_cols=219  Identities=18%  Similarity=0.073  Sum_probs=151.7

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHcCCEEEEEecCh-----hhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           31 TIAIVTGANKGIGFALVKRLAELGLTVILTARDV-----ERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~-----~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      |+||||||+|.||.+++++|.++|++|++++|..     .+++...........++.++.+|++|.++++++++++    
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~----   77 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV----   77 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH----
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhcc----
Confidence            7899999999999999999999999999999954     2333333333333457899999999999999999876    


Q ss_pred             CCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccch
Q 022103          106 AALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILED  185 (302)
Q Consensus       106 g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~  185 (302)
                       .+|+++|+|+.....   ...++.+..+++|+.|+.++++++...-.+  ...++|++||...+ +.+...   ...  
T Consensus        78 -~~d~v~h~aa~~~~~---~~~~~~~~~~~~Nv~gt~nllea~~~~~~~--~~~r~i~~SS~~vY-G~~~~~---~~~--  145 (357)
T d1db3a_          78 -QPDEVYNLGAMSHVA---VSFESPEYTADVDAMGTLRLLEAIRFLGLE--KKTRFYQASTSELY-GLVQEI---PQK--  145 (357)
T ss_dssp             -CCSEEEECCCCCTTT---TTTSCHHHHHHHHTHHHHHHHHHHHHTTCT--TTCEEEEEEEGGGG-TTCCSS---SBC--
T ss_pred             -CCCEEEEeecccccc---hhhhCHHHHHHHHHHHHHHHHHHHHHhCCC--CCcEEEEEEchhhh-CCCCCC---CcC--
Confidence             789999999986543   234556778999999999999998654222  24689999996543 222110   000  


Q ss_pred             hhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC---
Q 022103          186 EELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ---  262 (302)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~---  262 (302)
                                               +...+.+...|+.||.+.|.+++.+++.   .|+++..+.|+.+..|.....   
T Consensus       146 -------------------------E~~~~~P~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~~~vyGp~~~~~~~~  197 (357)
T d1db3a_         146 -------------------------ETTPFYPRSPYAVAKLYAYWITVNYRES---YGMYACNGILFNHESPRRGETFVT  197 (357)
T ss_dssp             -------------------------TTSCCCCCSHHHHHHHHHHHHHHHHHHH---HCCCEEEEEECCEECTTSCTTSHH
T ss_pred             -------------------------CCCCCCCCChHHHHHHHHHHHHHHHHHH---hCCCEEEEEeccccCCCCCcCCCc
Confidence                                     1111223478999999999999999987   478889999988877642211   


Q ss_pred             ---------------------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          263 ---------------------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       263 ---------------------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                                                 .....++++..+..++.. +   ..+.+.+..+..
T Consensus       198 ~~i~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~D~~~a~~~~~~~-~---~~~~yni~sg~~  255 (357)
T d1db3a_         198 RKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMMLQQ-E---QPEDFVIATGVQ  255 (357)
T ss_dssp             HHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHHHHHTTSS-S---SCCCEEECCCCC
T ss_pred             hHHHHHHHHHHhCCCceEEECCCCeeecceeechHHHHHHHHHhC-C---CCCeEEECCCCc
Confidence                                       125578899888777652 2   235555555544

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.78  E-value=1.8e-20  Score=158.60  Aligned_cols=120  Identities=16%  Similarity=0.121  Sum_probs=101.2

Q ss_pred             ccccccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHH
Q 022103           22 SSTKWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWF  101 (302)
Q Consensus        22 ~~~~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~  101 (302)
                      .+...+++||+++||||++|||+++|+.|+++|++|++++|+.+++++..+++.+. .++.+..+|+++.+++++++   
T Consensus        15 ~~~~~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~---   90 (191)
T d1luaa1          15 KAAGGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKR-FKVNVTAAETADDASRAEAV---   90 (191)
T ss_dssp             HHTTSCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH-HTCCCEEEECCSHHHHHHHT---
T ss_pred             HHcCCCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhc-cchhhhhhhcccHHHHHHHh---
Confidence            34567899999999999999999999999999999999999999999999988764 35667889999999887665   


Q ss_pred             HhhCCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhh
Q 022103          102 KSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLF  152 (302)
Q Consensus       102 ~~~~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l  152 (302)
                          +.+|+||||||...   ...+.+.|+..+++|+.+.+++...+...+
T Consensus        91 ----~~iDilin~Ag~g~---~~~~~e~~~~~~~~nv~~~~~~~~~~~~~~  134 (191)
T d1luaa1          91 ----KGAHFVFTAGAIGL---ELLPQAAWQNESSIEIVADYNAQPPLGIGG  134 (191)
T ss_dssp             ----TTCSEEEECCCTTC---CCBCHHHHHTCTTCCEEEECCCSSSCSBTT
T ss_pred             ----cCcCeeeecCcccc---ccCCHHHHHhhhcceeehhHhhHHHHHHHh
Confidence                47899999999743   347899999999999988887665554433

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.74  E-value=4.8e-17  Score=148.38  Aligned_cols=187  Identities=17%  Similarity=0.120  Sum_probs=134.1

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhh-HHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCcc
Q 022103           31 TIAIVTGANKGIGFALVKRLAELGLTVILTARDVER-GQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALD  109 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~-~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id  109 (302)
                      |+||||||+|.||.++++.|+++|++|+++++.... .+.....-......+.++.+|++|.++++.++...     .+|
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~-----~~d   76 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEY-----KID   76 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHS-----CCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhcc-----CCC
Confidence            689999999999999999999999999999763321 11111111111346889999999999999888754     699


Q ss_pred             EEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhhc
Q 022103          110 ILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELS  189 (302)
Q Consensus       110 ~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~  189 (302)
                      +|+|+|+.....   ...+..+....+|+.++.++++++...     ...++|++||...+......+...         
T Consensus        77 ~VihlAa~~~~~---~~~~~~~~~~~~N~~~t~~ll~~~~~~-----~i~~~i~~SS~~vyg~~~~~~~~~---------  139 (347)
T d1z45a2          77 SVIHFAGLKAVG---ESTQIPLRYYHNNILGTVVLLELMQQY-----NVSKFVFSSSATVYGDATRFPNMI---------  139 (347)
T ss_dssp             EEEECCSCCCHH---HHHHSHHHHHHHHHHHHHHHHHHHHHH-----TCCEEEEEEEGGGGCCGGGSTTCC---------
T ss_pred             EEEEcccccccc---ccccCcccccccchhhhHHHHHHHHhc-----ccceEEeecceeeecCcccCCCCC---------
Confidence            999999976432   234555778999999999999998653     357899999988664333221110         


Q ss_pred             HHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCC
Q 022103          190 EEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSM  258 (302)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~  258 (302)
                                        ...+.....+...|+.||.+.|.+++.+.+.. ..++++..+.|+.+..+.
T Consensus       140 ------------------~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~~~lR~~~v~g~~  189 (347)
T d1z45a2         140 ------------------PIPEECPLGPTNPYGHTKYAIENILNDLYNSD-KKSWKFAILRYFNPIGAH  189 (347)
T ss_dssp             ------------------SBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHS-TTSCEEEEEEECEEECCC
T ss_pred             ------------------ccccccCCCCCChhHhHHHHHHHHHHHHHHhh-ccCCcEEEEeecceEeec
Confidence                              11111112234679999999999999998753 357888888888776543

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.73  E-value=1.3e-16  Score=145.50  Aligned_cols=237  Identities=18%  Similarity=0.134  Sum_probs=157.2

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhh-C-CCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSE-K-GLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~-~-~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      .+||+||||||+|.||.++++.|.++|++|+++.|+.++.+...+.... . ......+..|++|.+++.+++.      
T Consensus         9 ~~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   82 (342)
T d1y1pa1           9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIK------   82 (342)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTT------
T ss_pred             CCcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcc------
Confidence            4589999999999999999999999999999999998776655443321 1 2233557789999987766554      


Q ss_pred             CCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccch
Q 022103          106 AALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILED  185 (302)
Q Consensus       106 g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~  185 (302)
                       .+|.++|+++.....   .+   ....+.+|+.|+.++++.+...    ....++|++||..+........ .....++
T Consensus        83 -~~~~v~~~a~~~~~~---~~---~~~~~~~nv~gt~~ll~~~~~~----~~v~~~i~~SS~~~~~~~~~~~-~~~~~~e  150 (342)
T d1y1pa1          83 -GAAGVAHIASVVSFS---NK---YDEVVTPAIGGTLNALRAAAAT----PSVKRFVLTSSTVSALIPKPNV-EGIYLDE  150 (342)
T ss_dssp             -TCSEEEECCCCCSCC---SC---HHHHHHHHHHHHHHHHHHHHTC----TTCCEEEEECCGGGTCCCCTTC-CCCEECT
T ss_pred             -cchhhhhhccccccc---cc---ccccccchhhhHHHHHHhhhcc----cccccccccccceeeccCCCCC-CCccccc
Confidence             689999999875321   22   3456788999999998887553    2468999999976544322211 1123344


Q ss_pred             hhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCCC--
Q 022103          186 EELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQG--  263 (302)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~~--  263 (302)
                      +.++...+..-...          .+.....+..+|+.+|.+.|.+++.+++++. .++++.+|+|+.+..+......  
T Consensus       151 ~~~~~~~~~~~~~~----------~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~-~~~~~~~i~p~~v~Gp~~~~~~~~  219 (342)
T d1y1pa1         151 KSWNLESIDKAKTL----------PESDPQKSLWVYAASKTEAELAAWKFMDENK-PHFTLNAVLPNYTIGTIFDPETQS  219 (342)
T ss_dssp             TCCCHHHHHHHHHS----------CTTSTTHHHHHHHHHHHHHHHHHHHHHHHHC-CSSEEEEEEESEEECCCSCTTTCC
T ss_pred             cccccccccccccc----------cccCCCCCcCcccchhHhHHHHHHHhhhhcc-cccccceecccceeCCCCCccccc
Confidence            44443332211000          0111122346799999999999999998864 4689999999988766432210  


Q ss_pred             --------------------------CCCHHHHHHHHHHHhhcCCCCCCCcceeecCCc
Q 022103          264 --------------------------SHTADEAADVGARLLLLHPQQLPTAKFYIGLDP  296 (302)
Q Consensus       264 --------------------------~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  296 (302)
                                                ....+++|...+..+..+.   ..|.+++..+.
T Consensus       220 ~~~~~~~~~l~~g~~~~~~~~~~~~~~v~v~Dva~~~i~~l~~~~---~~g~~~~~~~~  275 (342)
T d1y1pa1         220 GSTSGWMMSLFNGEVSPALALMPPQYYVSAVDIGLLHLGCLVLPQ---IERRRVYGTAG  275 (342)
T ss_dssp             CHHHHHHHHHHTTCCCHHHHTCCSEEEEEHHHHHHHHHHHHHCTT---CCSCEEEECCE
T ss_pred             cchHHHHHHHHcCCcCcccCCccceeeeeHHHHHHHHHHhhcCcc---ccceEEEEcCC
Confidence                                      1446788888776665322   35656655443

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=99.72  E-value=6.5e-17  Score=147.09  Aligned_cols=180  Identities=18%  Similarity=0.137  Sum_probs=134.4

Q ss_pred             EEEeCCCchHHHHHHHHHHHcCCEEEEEecChh---hHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCcc
Q 022103           33 AIVTGANKGIGFALVKRLAELGLTVILTARDVE---RGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALD  109 (302)
Q Consensus        33 vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~---~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id  109 (302)
                      ||||||+|.||.++++.|+++|++|++++|...   ......+...  ...+.++++|++|.+.+.++++..     .+|
T Consensus         3 iLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~l~~~~~~~-----~~d   75 (338)
T d1udca_           3 VLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLG--GKHPTFVEGDIRNEALMTEILHDH-----AID   75 (338)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHH--TSCCEEEECCTTCHHHHHHHHHHT-----TCS
T ss_pred             EEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhc--CCCCEEEEeecCCHHHHHHHHhcc-----CCC
Confidence            999999999999999999999999999987332   2222222222  347899999999999998888864     689


Q ss_pred             EEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhhc
Q 022103          110 ILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELS  189 (302)
Q Consensus       110 ~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~  189 (302)
                      +|||+|+....+   .+.++.+..+++|+.|+.++++++...     ...++|++||.....+....+..          
T Consensus        76 ~ViHlAa~~~~~---~~~~~~~~~~~~Nv~gt~nlL~~~~~~-----~v~~~i~~Ss~~vy~~~~~~~~~----------  137 (338)
T d1udca_          76 TVIHFAGLKAVG---ESVQKPLEYYDNNVNGTLRLISAMRAA-----NVKNFIFSSSATVYGDQPKIPYV----------  137 (338)
T ss_dssp             EEEECCSCCCHH---HHHHCHHHHHHHHHHHHHHHHHHHHHH-----TCCEEEEEEEGGGGCSCCSSSBC----------
T ss_pred             EEEECCCccchh---hHHhCHHHHHHhHHHHHHHHHHHHHHh-----CCCEEEecCcceEEccccccccc----------
Confidence            999999975322   344566789999999999999988765     35789999987765433321110          


Q ss_pred             HHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCC
Q 022103          190 EEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMT  259 (302)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~  259 (302)
                                          ...+...+...|+.+|.+.+.+++..+.++  .++.+..+.|+.+..+..
T Consensus       138 --------------------e~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~~  185 (338)
T d1udca_         138 --------------------ESFPTGTPQSPYGKSKLMVEQILTDLQKAQ--PDWSIALLRYFNPVGAHP  185 (338)
T ss_dssp             --------------------TTSCCCCCSSHHHHHHHHHHHHHHHHHHHS--TTCEEEEEEECEEECCCT
T ss_pred             --------------------cccccCCCcchHHHHHhhhhHHHHHHHhhc--cCCeEEEEeeccEEeccC
Confidence                                011112335789999999999999888774  578998999998887643

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=7e-17  Score=146.63  Aligned_cols=184  Identities=14%  Similarity=0.017  Sum_probs=131.9

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChh-----hHHHHHHHHhh-CCCceeEEEeeCCCHHHHHHHHHHHHhh
Q 022103           31 TIAIVTGANKGIGFALVKRLAELGLTVILTARDVE-----RGQRAVESLSE-KGLPVNFFQLDVSDPSSIEAFVSWFKSN  104 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~-----~~~~~~~~l~~-~~~~~~~~~~Dlt~~~~~~~~~~~~~~~  104 (302)
                      |+||||||+|.||.+++++|.++|++|+.++|...     +++........ ....+.++.+|++|.+.+..++...   
T Consensus         2 KI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---   78 (347)
T d1t2aa_           2 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV---   78 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH---
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhc---
Confidence            55699999999999999999999999999999542     22221111111 1236789999999999999999876   


Q ss_pred             CCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccc
Q 022103          105 FAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILE  184 (302)
Q Consensus       105 ~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~  184 (302)
                        .+++++|+++.....   ...+.....+++|+.|+.++++++...-..  ...++|++||...+ +....        
T Consensus        79 --~~~~v~~~~a~~~~~---~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~--~~~~~i~~SS~~vy-g~~~~--------  142 (347)
T d1t2aa_          79 --KPTEIYNLGAQSHVK---ISFDLAEYTADVDGVGTLRLLDAVKTCGLI--NSVKFYQASTSELY-GKVQE--------  142 (347)
T ss_dssp             --CCSEEEECCSCCCHH---HHHHSHHHHHHHHTHHHHHHHHHHHHTTCT--TTCEEEEEEEGGGT-CSCSS--------
T ss_pred             --ccceeeeeeeccccc---hhhccchhhhhhHHHHHHHHHHHHHHcCCC--CCcEEEEecchhee-cCCCC--------
Confidence              788999998875322   234555667899999999999988765332  24689999987653 22111        


Q ss_pred             hhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCC
Q 022103          185 DEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSM  258 (302)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~  258 (302)
                                            .++.+...+.+...|+.||.+.|.+++.+++.   +++.+..+.|+.+..|-
T Consensus       143 ----------------------~~~~E~~~~~P~~~Yg~sK~~aE~~~~~~~~~---~~~~~~ilr~~~vyGp~  191 (347)
T d1t2aa_         143 ----------------------IPQKETTPFYPRSPYGAAKLYAYWIVVNFREA---YNLFAVNGILFNHESPR  191 (347)
T ss_dssp             ----------------------SSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHH---HCCEEEEEEECCEECTT
T ss_pred             ----------------------CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCCEEEEEecceeCCC
Confidence                                  01111122334578999999999999999887   57888889998777763

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.71  E-value=2.5e-16  Score=145.82  Aligned_cols=198  Identities=14%  Similarity=0.072  Sum_probs=133.5

Q ss_pred             CcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhH----------------HHHHHHHh-hCCCceeEEEeeCCCHH
Q 022103           30 ETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERG----------------QRAVESLS-EKGLPVNFFQLDVSDPS   92 (302)
Q Consensus        30 ~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~----------------~~~~~~l~-~~~~~~~~~~~Dlt~~~   92 (302)
                      |++||||||+|.||.+++++|+++|++|++++.-....                .+...... ..+.++.++.+|++|.+
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~   80 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFE   80 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCHH
Confidence            68899999999999999999999999999987322111                11111111 12457899999999999


Q ss_pred             HHHHHHHHHHhhCCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccc
Q 022103           93 SIEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLS  172 (302)
Q Consensus        93 ~~~~~~~~~~~~~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~  172 (302)
                      .++++++..     ++|+|+|.|+.........+.+.....+.+|+.|+.++++++...   + ...++++.||... .+
T Consensus        81 ~l~~~~~~~-----~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~---~-~~~~~i~~ss~~~-~~  150 (393)
T d1i24a_          81 FLAESFKSF-----EPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEF---G-EECHLVKLGTMGE-YG  150 (393)
T ss_dssp             HHHHHHHHH-----CCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHH---C-TTCEEEEECCGGG-GC
T ss_pred             HHHHHHHhh-----cchheeccccccccccccccccccccccccccccccHHHHHHHHh---c-cccceeecccccc-cc
Confidence            999999976     799999999976544344567778889999999999999988764   1 2345666665543 32


Q ss_pred             cccCcccccccchhhhcHHHHHHHHHHHHhhhccC-CCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeec
Q 022103          173 KVRNPNIKSILEDEELSEEQIERFVGLFLQSVKDG-TWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCP  251 (302)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~P  251 (302)
                      ....+..      +.+.            ....++ .........+...|+.||.+.|.+++.++++   +++++..+.|
T Consensus       151 ~~~~~~~------~~~~------------~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~---~~l~~~~lR~  209 (393)
T d1i24a_         151 TPNIDIE------EGYI------------TITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA---WGIRATDLNQ  209 (393)
T ss_dssp             CCSSCBC------SSEE------------EEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHH---HCCEEEEEEE
T ss_pred             ccccccc------cccc------------cccccccccccccccccccHHHHHhhhhcccccccccc---cceeeeeccc
Confidence            2211000      0000            000000 0000001122367999999999999999887   5799999999


Q ss_pred             CcccCCC
Q 022103          252 GFTQTSM  258 (302)
Q Consensus       252 G~v~T~~  258 (302)
                      +.+..+-
T Consensus       210 ~~v~G~~  216 (393)
T d1i24a_         210 GVVYGVK  216 (393)
T ss_dssp             CEEECSC
T ss_pred             ccccCCC
Confidence            8887654

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.70  E-value=3.4e-16  Score=140.53  Aligned_cols=181  Identities=19%  Similarity=0.103  Sum_probs=130.3

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhH-HHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCcc
Q 022103           31 TIAIVTGANKGIGFALVKRLAELGLTVILTARDVERG-QRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALD  109 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~-~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id  109 (302)
                      |+||||||+|.||++++++|.++|++|+.++|..... ....+++.. ..++.++.+|++|.+.+...+...     ..+
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~-----~~~   74 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGI-EGDIQYEDGDMADACSVQRAVIKA-----QPQ   74 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTC-GGGEEEEECCTTCHHHHHHHHHHH-----CCS
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHHhcc-cCCcEEEEccccChHHhhhhhccc-----ccc
Confidence            7899999999999999999999999999999865321 122333322 246899999999999999888876     678


Q ss_pred             EEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhhc
Q 022103          110 ILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELS  189 (302)
Q Consensus       110 ~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~  189 (302)
                      +++|+++.....   ...+.....+.+|+.|+.++++++...   . ...+|++.||.. ..+.......          
T Consensus        75 ~~~~~a~~~~~~---~~~~~~~~~~~~n~~g~~~~l~~~~~~---~-~~~~~i~~Ss~~-~~~~~~~~~~----------  136 (321)
T d1rpna_          75 EVYNLAAQSFVG---ASWNQPVTTGVVDGLGVTHLLEAIRQF---S-PETRFYQASTSE-MFGLIQAERQ----------  136 (321)
T ss_dssp             EEEECCSCCCHH---HHTTSHHHHHHHHTHHHHHHHHHHHHH---C-TTSEEEEEEEGG-GGCSCSSSSB----------
T ss_pred             cccccccccccc---ccccchHHHHhhhhhchHHHHHHHHHh---C-CCcccccccchh-hcCcccCCCC----------
Confidence            888888775432   122345678999999999999888664   1 234566666544 3333322110          


Q ss_pred             HHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCC
Q 022103          190 EEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSM  258 (302)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~  258 (302)
                                          -+...+.+...|+.+|.+.|.+++.++.+   +++++..+.|+.+..|.
T Consensus       137 --------------------~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lr~~~vyGp~  182 (321)
T d1rpna_         137 --------------------DENTPFYPRSPYGVAKLYGHWITVNYRES---FGLHASSGILFNHESPL  182 (321)
T ss_dssp             --------------------CTTSCCCCCSHHHHHHHHHHHHHHHHHHH---HCCCEEEEEECCEECTT
T ss_pred             --------------------CCCCCccccChhHHHHHHHHHHHHHHHhh---cCCcEEEEEEecccCCC
Confidence                                01112233578999999999999999987   57888888888777765

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.69  E-value=4.3e-16  Score=140.75  Aligned_cols=187  Identities=19%  Similarity=0.079  Sum_probs=133.1

Q ss_pred             CcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChh-----hHHHHHHHHhh-CCCceeEEEeeCCCHHHHHHHHHHHHh
Q 022103           30 ETIAIVTGANKGIGFALVKRLAELGLTVILTARDVE-----RGQRAVESLSE-KGLPVNFFQLDVSDPSSIEAFVSWFKS  103 (302)
Q Consensus        30 ~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~-----~~~~~~~~l~~-~~~~~~~~~~Dlt~~~~~~~~~~~~~~  103 (302)
                      .|+||||||+|.||.++++.|.++|++|++++|...     +.+........ ....+.++.+|+++.+++...++..  
T Consensus         1 ~k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~--   78 (339)
T d1n7ha_           1 RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVI--   78 (339)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHH--
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhh--
Confidence            489999999999999999999999999999998532     22211111111 1235788999999999999988865  


Q ss_pred             hCCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCccccccc
Q 022103          104 NFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSIL  183 (302)
Q Consensus       104 ~~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~  183 (302)
                         .+|+|+|+|+.....   ...+.....+.+|+.+..+++.++.....+.....++++.||.... +....+    . 
T Consensus        79 ---~~D~Vih~Aa~~~~~---~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~-~~~~~~----~-  146 (339)
T d1n7ha_          79 ---KPDEVYNLAAQSHVA---VSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMF-GSTPPP----Q-  146 (339)
T ss_dssp             ---CCSEEEECCSCCCHH---HHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGG-TTSCSS----B-
T ss_pred             ---ccchhhhcccccccc---ccccCccccccccccccchhhhhhhhcccccccceeeeecccceec-ccCCCC----C-
Confidence               799999999985432   3446677889999999999998887655544233455555554332 221110    0 


Q ss_pred             chhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCC
Q 022103          184 EDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMT  259 (302)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~  259 (302)
                                                .+.....+...|+.+|.+.|.+++.+++.   +++.+..+.|+.+..|..
T Consensus       147 --------------------------~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~vyGp~~  193 (339)
T d1n7ha_         147 --------------------------SETTPFHPRSPYAASKCAAHWYTVNYREA---YGLFACNGILFNHESPRR  193 (339)
T ss_dssp             --------------------------CTTSCCCCCSHHHHHHHHHHHHHHHHHHH---HCCEEEEEEECCEECTTS
T ss_pred             --------------------------CCCCCCCCcchhhHHHHHHHHHHHHHHHH---hCCCEEEEEEccccCCCC
Confidence                                      01111223478999999999999999987   579999999999887753

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.68  E-value=1.1e-15  Score=138.76  Aligned_cols=182  Identities=16%  Similarity=0.082  Sum_probs=132.4

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChh----hHHHHHHHHhh-CCCceeEEEeeCCCHHHHHHHHHHHH
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVE----RGQRAVESLSE-KGLPVNFFQLDVSDPSSIEAFVSWFK  102 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~----~~~~~~~~l~~-~~~~~~~~~~Dlt~~~~~~~~~~~~~  102 (302)
                      .+.|++|||||+|.||.+++++|.++|++|++++|...    ..+........ ....+.++.+|+.|...+.....   
T Consensus        14 ~~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~---   90 (341)
T d1sb8a_          14 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA---   90 (341)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT---
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeeccccccccccccc---
Confidence            45689999999999999999999999999999987332    22222111111 12367899999999987664443   


Q ss_pred             hhCCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccc
Q 022103          103 SNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSI  182 (302)
Q Consensus       103 ~~~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~  182 (302)
                          ..+.++|.++.....   ...+++...+++|+.|+.++++++...     +..++|++||..........+     
T Consensus        91 ----~~~~v~~~~a~~~~~---~~~~~~~~~~~~Nv~gt~~ll~~~~~~-----~~~~~i~~SS~~vyg~~~~~~-----  153 (341)
T d1sb8a_          91 ----GVDYVLHQAALGSVP---RSINDPITSNATNIDGFLNMLIAARDA-----KVQSFTYAASSSTYGDHPGLP-----  153 (341)
T ss_dssp             ----TCSEEEECCSCCCHH---HHHHCHHHHHHHHTHHHHHHHHHHHHT-----TCSEEEEEEEGGGGTTCCCSS-----
T ss_pred             ----ccccccccccccccc---ccccCccchhheeehhHHHHHHHHHhc-----CCceEEEcccceeeCCCCCCC-----
Confidence                678888888764322   355777889999999999999988654     357999999988754332221     


Q ss_pred             cchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCC
Q 022103          183 LEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSM  258 (302)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~  258 (302)
                                                ..+...+.+...|+.+|.+.|.+++.+++.   .++++..+.|+.+..+.
T Consensus       154 --------------------------~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~i~~~ilR~~~v~G~~  200 (341)
T d1sb8a_         154 --------------------------KVEDTIGKPLSPYAVTKYVNELYADVFSRC---YGFSTIGLRYFNVFGRR  200 (341)
T ss_dssp             --------------------------BCTTCCCCCCSHHHHHHHHHHHHHHHHHHH---HCCCCEEEEECCEECTT
T ss_pred             --------------------------ccCCCCCCCCCcchHHHHHHHHHHHHHHHH---hCCCeEEEEeceeeccC
Confidence                                      111122333578999999999999999987   47888899998887654

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.67  E-value=3.2e-16  Score=144.16  Aligned_cols=216  Identities=15%  Similarity=0.110  Sum_probs=147.2

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCEEE-EEecChhh-HHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCcc
Q 022103           32 IAIVTGANKGIGFALVKRLAELGLTVI-LTARDVER-GQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALD  109 (302)
Q Consensus        32 ~vlItGas~gIG~ala~~l~~~G~~V~-l~~r~~~~-~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id  109 (302)
                      +||||||+|.||.+++++|++.|++|+ ++++.... .....+.+. ...++.++.+|++|...+..+++..     .+|
T Consensus         2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~l~~~~~~~-----~~d   75 (361)
T d1kewa_           2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDIS-ESNRYNFEHADICDSAEITRIFEQY-----QPD   75 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTT-TCTTEEEEECCTTCHHHHHHHHHHH-----CCS
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHHHhhh-hcCCcEEEEccCCCHHHHHHHHHhC-----CCC
Confidence            489999999999999999999999754 44442211 011111111 1347899999999999999998865     799


Q ss_pred             EEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcC----CCCCcEEEecCCCcccccccCcccccccch
Q 022103          110 ILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRS----PSKSRILNISSRLGTLSKVRNPNIKSILED  185 (302)
Q Consensus       110 ~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~----~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~  185 (302)
                      +|+|+|+....+   .+.++....+++|+.|+.++++.+...-...    ....++|++||..........+....    
T Consensus        76 ~VihlAa~~~~~---~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~----  148 (361)
T d1kewa_          76 AVMHLAAESHVD---RSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVEN----  148 (361)
T ss_dssp             EEEECCSCCCHH---HHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCT----
T ss_pred             EEEECccccchh---hHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCcccc----
Confidence            999999975432   2345567789999999999999987754321    02468999999776533221110000    


Q ss_pred             hhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC---
Q 022103          186 EELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ---  262 (302)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~---  262 (302)
                                       ........+.....+...|+.||.+.|.+++.++..   .|+++..+.|+.+..|.....   
T Consensus       149 -----------------~~~~~~~~e~~~~~p~s~Yg~sK~~~E~~~~~~~~~---~~i~~~~lR~~~vyGp~~~~~~~i  208 (361)
T d1kewa_         149 -----------------SVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRT---YGLPTIVTNCSNNYGPYHFPEKLI  208 (361)
T ss_dssp             -----------------TSCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHH---HCCCEEEEEECEEESTTCCTTSHH
T ss_pred             -----------------ccCCCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCCEEEEecCceECcCCCcCcHH
Confidence                             000011112222334578999999999999999987   479999999999888754321   


Q ss_pred             ----------------C-------CCCHHHHHHHHHHHhhc
Q 022103          263 ----------------G-------SHTADEAADVGARLLLL  280 (302)
Q Consensus       263 ----------------~-------~~~~~~~a~~~~~l~~~  280 (302)
                                      +       ....+++|..+..++..
T Consensus       209 ~~~i~~~~~g~~~~v~g~g~~~r~~i~v~D~a~ai~~~~~~  249 (361)
T d1kewa_         209 PLVILNALEGKPLPIYGKGDQIRDWLYVEDHARALHMVVTE  249 (361)
T ss_dssp             HHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHcCCCcEEeCCCCeEEeCEEHHHHHHHHHHHHhc
Confidence                            1       14578888888877753

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.66  E-value=3.6e-15  Score=126.30  Aligned_cols=190  Identities=12%  Similarity=0.118  Sum_probs=129.7

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      |..|+++||||+|+||++++++|+++|++|+++.|+.+++...      ....+.++.+|++|.+++.++++       .
T Consensus         1 m~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~------~~~~~~~~~gD~~d~~~l~~al~-------~   67 (205)
T d1hdoa_           1 MAVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE------GPRPAHVVVGDVLQAADVDKTVA-------G   67 (205)
T ss_dssp             CCCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS------SCCCSEEEESCTTSHHHHHHHHT-------T
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcccc------cccccccccccccchhhHHHHhc-------C
Confidence            4568899999999999999999999999999999998774321      12467899999999999887766       5


Q ss_pred             ccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhh
Q 022103          108 LDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEE  187 (302)
Q Consensus       108 id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~  187 (302)
                      .|+||+++|.....    +.      ..++..+..++++++    +++ +..++|++||.........            
T Consensus        68 ~d~vi~~~g~~~~~----~~------~~~~~~~~~~l~~aa----~~~-~v~r~i~~ss~~~~~~~~~------------  120 (205)
T d1hdoa_          68 QDAVIVLLGTRNDL----SP------TTVMSEGARNIVAAM----KAH-GVDKVVACTSAFLLWDPTK------------  120 (205)
T ss_dssp             CSEEEECCCCTTCC----SC------CCHHHHHHHHHHHHH----HHH-TCCEEEEECCGGGTSCTTC------------
T ss_pred             CCEEEEEeccCCch----hh------hhhhHHHHHHHHHHH----Hhc-CCCeEEEEeeeeccCCCcc------------
Confidence            79999999975321    11      123344555555544    344 5689999998655422211            


Q ss_pred             hcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCC------
Q 022103          188 LSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQG------  261 (302)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~------  261 (302)
                                                .|+....|...|...+.+.+       ..|++...|.||.+...-...      
T Consensus       121 --------------------------~~~~~~~~~~~~~~~e~~l~-------~~~~~~tiirp~~~~~~~~~~~~~~~~  167 (205)
T d1hdoa_         121 --------------------------VPPRLQAVTDDHIRMHKVLR-------ESGLKYVAVMPPHIGDQPLTGAYTVTL  167 (205)
T ss_dssp             --------------------------SCGGGHHHHHHHHHHHHHHH-------HTCSEEEEECCSEEECCCCCSCCEEES
T ss_pred             --------------------------ccccccccchHHHHHHHHHH-------hcCCceEEEecceecCCCCcccEEEee
Confidence                                      12223456666666664432       368999999999885432221      


Q ss_pred             -----CCCCCHHHHHHHHHHHhhcCCCCCCCcceeec
Q 022103          262 -----QGSHTADEAADVGARLLLLHPQQLPTAKFYIG  293 (302)
Q Consensus       262 -----~~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~  293 (302)
                           ...++.+++|..++..+.. ++  -.|+.+..
T Consensus       168 ~~~~~~~~i~~~DvA~~~~~~l~~-~~--~~g~~~~~  201 (205)
T d1hdoa_         168 DGRGPSRVISKHDLGHFMLRCLTT-DE--YDGHSTYP  201 (205)
T ss_dssp             SSCSSCSEEEHHHHHHHHHHTTSC-ST--TTTCEEEE
T ss_pred             CCCCCCCcCCHHHHHHHHHHHhCC-CC--CCCEEEec
Confidence                 1226789999999998863 32  23665543

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=99.65  E-value=1.3e-15  Score=136.49  Aligned_cols=169  Identities=14%  Similarity=0.091  Sum_probs=124.9

Q ss_pred             CcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCcc
Q 022103           30 ETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALD  109 (302)
Q Consensus        30 ~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id  109 (302)
                      .|+||||||+|.||.+++++|+++|+.|+++++..                    .+|+.+.+.+.++++.-     .+|
T Consensus         2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~--------------------~~~~~~~~~~~~~~~~~-----~~d   56 (315)
T d1e6ua_           2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD--------------------ELNLLDSRAVHDFFASE-----RID   56 (315)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT--------------------TCCTTCHHHHHHHHHHH-----CCS
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCch--------------------hccccCHHHHHHHHhhc-----CCC
Confidence            57899999999999999999999999988765432                    15899999998887753     789


Q ss_pred             EEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhhc
Q 022103          110 ILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELS  189 (302)
Q Consensus       110 ~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~  189 (302)
                      .++|+|+.....  ........+.+.+|+.++.++++++...     ...++|++||...+.+....+-     +++.  
T Consensus        57 ~v~~~a~~~~~~--~~~~~~~~~~~~~Nv~gt~~ll~~a~~~-----~v~~~i~~SS~~vyg~~~~~~~-----~E~~--  122 (315)
T d1e6ua_          57 QVYLAAAKVGGI--VANNTYPADFIYQNMMIESNIIHAAHQN-----DVNKLLFLGSSCIYPKLAKQPM-----AESE--  122 (315)
T ss_dssp             EEEECCCCCCCH--HHHHHCHHHHHHHHHHHHHHHHHHHHHT-----TCCEEEEECCGGGSCTTCCSSB-----CGGG--
T ss_pred             EEEEcchhcccc--ccchhhHHHHHHHHHHHHHHHHHHHHHc-----CCCEEEEECCceEcCCCCCCCc-----cCCc--
Confidence            999999765331  1234455667889999999999888664     4578999999887644322210     0000  


Q ss_pred             HHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCC
Q 022103          190 EEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMT  259 (302)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~  259 (302)
                                         ..+....+...+|+.||.+.|.+++.+.++   .|+++..+.|+.|..|..
T Consensus       123 -------------------~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gl~~~ilR~~~vyGp~~  170 (315)
T d1e6ua_         123 -------------------LLQGTLEPTNEPYAIAKIAGIKLCESYNRQ---YGRDYRSVMPTNLYGPHD  170 (315)
T ss_dssp             -------------------TTSSCCCGGGHHHHHHHHHHHHHHHHHHHH---HCCEEEEEEECEEESTTC
T ss_pred             -------------------cccCCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCCEEEEeeccEECCCC
Confidence                               000111122357999999999999999987   589999999999988753

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.64  E-value=1.5e-15  Score=136.75  Aligned_cols=179  Identities=17%  Similarity=0.122  Sum_probs=119.9

Q ss_pred             CcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCcc
Q 022103           30 ETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALD  109 (302)
Q Consensus        30 ~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id  109 (302)
                      .|+||||||+|.||.+++++|.++|++|++++|......+...... ...++.....|+.+.            .+.++|
T Consensus         1 kKKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~-~~~~~d~~~~~~~~~------------~~~~~d   67 (312)
T d2b69a1           1 RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWI-GHENFELINHDVVEP------------LYIEVD   67 (312)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGT-TCTTEEEEECCTTSC------------CCCCCS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHHHhc-CCCceEEEehHHHHH------------HHcCCC
Confidence            4789999999999999999999999999999874322111111111 112345555555332            224799


Q ss_pred             EEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhhc
Q 022103          110 ILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELS  189 (302)
Q Consensus       110 ~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~  189 (302)
                      +|+|+|+....+   ...++..+.+++|+.++.++++++...      ..++|++||..........+.           
T Consensus        68 ~VihlAa~~~~~---~~~~~~~~~~~~Nv~g~~~ll~~~~~~------~~k~I~~SS~~vy~~~~~~~~-----------  127 (312)
T d2b69a1          68 QIYHLASPASPP---NYMYNPIKTLKTNTIGTLNMLGLAKRV------GARLLLASTSEVYGDPEVHPQ-----------  127 (312)
T ss_dssp             EEEECCSCCSHH---HHTTCHHHHHHHHHHHHHHHHHHHHHH------TCEEEEEEEGGGGBSCSSSSB-----------
T ss_pred             EEEECcccCCch---hHHhCHHHHHHHHHHHHHHHHHHHHHc------CCcEEEEEChheecCCCCCCC-----------
Confidence            999999975432   122345677899999999999887543      258999999665432211110           


Q ss_pred             HHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCC
Q 022103          190 EEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMT  259 (302)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~  259 (302)
                                     .+..+.......+...|+.||.+.|.+++.++++   .|+++..+.|+.|..|..
T Consensus       128 ---------------~e~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~vyGp~~  179 (312)
T d2b69a1         128 ---------------SEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQ---EGVEVRVARIFNTFGPRM  179 (312)
T ss_dssp             ---------------CTTCCCBCCSSSTTHHHHHHHHHHHHHHHHHHHH---HCCCEEEEEECCEECTTC
T ss_pred             ---------------CccccCCCCCCCCccHHHHHHHHHHHHHHHHHHH---hCCcEEEEEeeeEECCCC
Confidence                           0001111111223478999999999999999988   479999999999987653

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.63  E-value=1e-14  Score=130.82  Aligned_cols=190  Identities=14%  Similarity=0.136  Sum_probs=125.5

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCEEEEEecCh-hhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCccE
Q 022103           32 IAIVTGANKGIGFALVKRLAELGLTVILTARDV-ERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDI  110 (302)
Q Consensus        32 ~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~-~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id~  110 (302)
                      .||||||+|.||.++++.|.++|++|+++++-. .........+.. ..++.++.+|+++.+++.++++..     ++|+
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~-~~~~~~i~~Di~~~~~l~~~~~~~-----~~d~   75 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSS-LGNFEFVHGDIRNKNDVTRLITKY-----MPDS   75 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHT-TCCCEEEECCTTCHHHHHHHHHHH-----CCSE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhc-cCCcEEEEcccCCHHHHHHHHHhc-----CCce
Confidence            589999999999999999999999999987532 222233333333 347899999999999999999876     7899


Q ss_pred             EEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhhcH
Q 022103          111 LVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSE  190 (302)
Q Consensus       111 lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~  190 (302)
                      |||+|+.....   ...++.+..+++|+.|+.++++++...     ...++++.+|.....+...........+...   
T Consensus        76 Vih~aa~~~~~---~~~~~~~~~~~~Nv~gt~nll~~~~~~-----~~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~---  144 (338)
T d1orra_          76 CFHLAGQVAMT---TSIDNPCMDFEINVGGTLNLLEAVRQY-----NSNCNIIYSSTNKVYGDLEQYKYNETETRYT---  144 (338)
T ss_dssp             EEECCCCCCHH---HHHHCHHHHHHHHHHHHHHHHHHHHHH-----CTTCEEEEEEEGGGGTTCTTSCEEECSSCEE---
T ss_pred             EEeeccccccc---ccccChHHHHHHHHHHHHHHHHhhhcc-----ccccccccccccccccccccccccccccccc---
Confidence            99999986432   234456788999999999999987654     3456666666555444332110000000000   


Q ss_pred             HHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecC
Q 022103          191 EQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPG  252 (302)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG  252 (302)
                                 ....+..+.......+...|+.+|...+.+.......+   ++....+.|.
T Consensus       145 -----------~~~~~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~---~~~~~~~~~~  192 (338)
T d1orra_         145 -----------CVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIF---GLNTVVFRHS  192 (338)
T ss_dssp             -----------ETTCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEEC
T ss_pred             -----------ccccccCcccCCccccccccccccchhhhhhhhhhhcc---Cccccccccc
Confidence                       00001111222223345789999999999999999885   3444444433

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.62  E-value=5.5e-15  Score=134.23  Aligned_cols=188  Identities=16%  Similarity=0.057  Sum_probs=135.9

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      .+||+||||||+|.||.++++.|.++|++|++++|+..+.....+.... ...+.++.+|++|.+.+.++++..     .
T Consensus         6 ~~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~-~~~i~~~~~Dl~d~~~l~~~~~~~-----~   79 (356)
T d1rkxa_           6 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARV-ADGMQSEIGDIRDQNKLLESIREF-----Q   79 (356)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTT-TTTSEEEECCTTCHHHHHHHHHHH-----C
T ss_pred             hCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhhc-ccCCeEEEeeccChHhhhhhhhhc-----h
Confidence            4789999999999999999999999999999999987654444433322 236899999999999999888876     7


Q ss_pred             ccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhh
Q 022103          108 LDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEE  187 (302)
Q Consensus       108 id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~  187 (302)
                      +|+++|+|+.....   .+.+..+..+.+|+.++.++++++...   . ....+++.|+ ............        
T Consensus        80 ~~~v~~~aa~~~~~---~~~~~~~~~~~~Nv~g~~n~l~~~~~~---~-~~~~~~~~s~-~~~~~~~~~~~~--------  143 (356)
T d1rkxa_          80 PEIVFHMAAQPLVR---LSYSEPVETYSTNVMGTVYLLEAIRHV---G-GVKAVVNITS-DKCYDNKEWIWG--------  143 (356)
T ss_dssp             CSEEEECCSCCCHH---HHHHCHHHHHHHHTHHHHHHHHHHHHH---C-CCCEEEEECC-GGGBCCCCSSSC--------
T ss_pred             hhhhhhhhcccccc---ccccCCccccccccccchhhhhhhhcc---c-cccccccccc-cccccccccccc--------
Confidence            89999999975432   345667788999999999999988764   1 2344444444 333322221100        


Q ss_pred             hcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHcc------CCCcEEEEeecCcccCCC
Q 022103          188 LSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYE------GEGISVNSYCPGFTQTSM  258 (302)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~------~~gI~V~~v~PG~v~T~~  258 (302)
                                           ........+...|+.+|...+.+++.++.++.      ..++.+..+.|+.+..+-
T Consensus       144 ---------------------~~~~~~~~p~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~  199 (356)
T d1rkxa_         144 ---------------------YRENEAMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGG  199 (356)
T ss_dssp             ---------------------BCTTSCBCCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTT
T ss_pred             ---------------------cccccccCCCCccccccccchhhhhHHhhhcccchhccccCceEEeccCCCeeCCC
Confidence                                 00011122246799999999999999988753      347889999998887654

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=99.62  E-value=5.5e-15  Score=133.88  Aligned_cols=214  Identities=13%  Similarity=0.014  Sum_probs=146.5

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcC-CEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCccE
Q 022103           32 IAIVTGANKGIGFALVKRLAELG-LTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDI  110 (302)
Q Consensus        32 ~vlItGas~gIG~ala~~l~~~G-~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id~  110 (302)
                      +||||||+|.||++++++|+++| ++|+++++.........     ...++.++.+|+++.+++.+.+.+      .+|+
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~-----~~~~~~~i~~Di~~~~~~~~~~~~------~~d~   70 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL-----NHPHFHFVEGDISIHSEWIEYHVK------KCDV   70 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT-----TCTTEEEEECCTTTCSHHHHHHHH------HCSE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhc-----cCCCeEEEECccCChHHHHHHHHh------CCCc
Confidence            38999999999999999999999 58999988654422211     135789999999988766553321      4899


Q ss_pred             EEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhhcH
Q 022103          111 LVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSE  190 (302)
Q Consensus       111 lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~  190 (302)
                      |+|+|+.....   ...+.....+.+|+.++.++++.+...      ..+++++||...............         
T Consensus        71 Vih~a~~~~~~---~~~~~~~~~~~~nv~gt~~ll~~~~~~------~~~~~~~ss~~~~~~~~~~~~~~~---------  132 (342)
T d2blla1          71 VLPLVAIATPI---EYTRNPLRVFELDFEENLRIIRYCVKY------RKRIIFPSTSEVYGMCSDKYFDED---------  132 (342)
T ss_dssp             EEECBCCCCHH---HHHHSHHHHHHHHTHHHHHHHHHHHHT------TCEEEEECCGGGGBTCCCSSBCTT---------
T ss_pred             ccccccccccc---ccccCCccccccccccccccccccccc------cccccccccccccccccccccccc---------
Confidence            99999986432   233555678999999999999998553      356677777665443322110000         


Q ss_pred             HHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC--------
Q 022103          191 EQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ--------  262 (302)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~--------  262 (302)
                                   ...-.  ..+...+...|+.||.+.|.+++.+++.   .|+++..+.|+.+..+.....        
T Consensus       133 -------------~~~~~--~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~i~r~~~~~g~~~~~~~~~~~~~~  194 (342)
T d2blla1         133 -------------HSNLI--VGPVNKPRWIYSVSKQLLDRVIWAYGEK---EGLQFTLFRPFNWMGPRLDNLNAARIGSS  194 (342)
T ss_dssp             -------------TCCCB--CCCTTCGGGHHHHHHHHHHHHHHHHHHH---HCCCEEEEEECSEECSSCCCTTCSBSCBC
T ss_pred             -------------ccccc--ccccCCCcchhhhcccchhhhhhhhhcc---cCceeEEeecccccccccccccccccccc
Confidence                         00000  0111223467999999999999999988   478888888888876542221        


Q ss_pred             --------------------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeec
Q 022103          263 --------------------------GSHTADEAADVGARLLLLHPQQLPTAKFYIG  293 (302)
Q Consensus       263 --------------------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~  293 (302)
                                                .....++++..+..++.. +.....|..|..
T Consensus       195 ~~~~~~~~~~~~g~~~~~~~~g~~~r~~i~v~D~~~a~~~~~~~-~~~~~~g~~~Ni  250 (342)
T d2blla1         195 RAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIEN-AGNRCDGEIINI  250 (342)
T ss_dssp             HHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHHHHHHHC-GGGTTTTEEEEE
T ss_pred             ccchHHHHHHHhCCCccccCCCCeeeeecccccccceeeeehhh-ccccCCCeEEEE
Confidence                                      025679999999999873 333355777765

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.61  E-value=2.9e-15  Score=136.35  Aligned_cols=223  Identities=17%  Similarity=0.138  Sum_probs=146.4

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHcCCEEEEEecCh---hhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           31 TIAIVTGANKGIGFALVKRLAELGLTVILTARDV---ERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~---~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      +.||||||+|.||.+++++|.++|++|.+++++.   .......+.+  .+.++.++.+|+.|.+.+..++.       .
T Consensus         3 mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~~--~~~~i~~~~~Di~d~~~~~~~~~-------~   73 (346)
T d1oc2a_           3 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAI--LGDRVELVVGDIADAELVDKLAA-------K   73 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGG--CSSSEEEEECCTTCHHHHHHHHT-------T
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHHh--hcCCeEEEEccCCCHHHHHHHHh-------h
Confidence            6799999999999999999999998755554431   1101111111  23578999999999999888765       5


Q ss_pred             ccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhh
Q 022103          108 LDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEE  187 (302)
Q Consensus       108 id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~  187 (302)
                      .+.++|.|+.....   ...++....+++|+.|+.+++..+...      ..++|++||.......+.....        
T Consensus        74 ~~~v~~~a~~~~~~---~~~~~~~~~~~~N~~g~~nll~~~~~~------~~k~i~~ss~~vyg~~~~~~~~--------  136 (346)
T d1oc2a_          74 ADAIVHYAAESHND---NSLNDPSPFIHTNFIGTYTLLEAARKY------DIRFHHVSTDEVYGDLPLREDL--------  136 (346)
T ss_dssp             CSEEEECCSCCCHH---HHHHCCHHHHHHHTHHHHHHHHHHHHH------TCEEEEEEEGGGGCCBCCGGGS--------
T ss_pred             hhhhhhhhhccccc---chhhCcccceeeehHhHHhhhhhhccc------cccccccccceEecccCccccc--------
Confidence            78899999876432   223445677899999999999887554      3577888776554221110000        


Q ss_pred             hcHHHHHHHHHHHHhhh-ccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC----
Q 022103          188 LSEEQIERFVGLFLQSV-KDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ----  262 (302)
Q Consensus       188 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~----  262 (302)
                                  ..... ....+.....+.+...|+.+|.+.|.+++.++++   .|+++..+.|+.+..|.....    
T Consensus       137 ------------~~~~~~~~~~~~e~~~~~p~s~Y~~sK~~~E~~~~~~~~~---~~i~~~ilR~~~vyGp~~~~~~~~~  201 (346)
T d1oc2a_         137 ------------PGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRS---FGVKATISNCSNNYGPYQHIEKFIP  201 (346)
T ss_dssp             ------------TTTTCSTTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHH---HCCEEEEEEECCEESTTCCTTSHHH
T ss_pred             ------------cccccCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHHH---cCCCEEEEeecceeCCCCCccchhH
Confidence                        00000 0111122222333478999999999999999987   589999999999988653221    


Q ss_pred             ----------------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          263 ----------------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       263 ----------------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                                            .....++++..+..+...+ .  ..+.+++..++.
T Consensus       202 ~~i~~~~~~~~~~i~~~g~~~r~~i~v~D~a~a~~~~~~~~-~--~~~~~~~~~~~~  255 (346)
T d1oc2a_         202 RQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAILTKG-R--MGETYLIGADGE  255 (346)
T ss_dssp             HHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHHHHHHHHC-C--TTCEEEECCSCE
T ss_pred             HHHHHHHcCCceeEeCCCCccccccchhhHHHHHHHHHhhc-c--cCcccccccccc
Confidence                                  0155788998888776532 2  345666665553

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=6.7e-15  Score=133.62  Aligned_cols=180  Identities=18%  Similarity=0.145  Sum_probs=129.7

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHcCCEEEEEec------Chhh---HHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHH
Q 022103           31 TIAIVTGANKGIGFALVKRLAELGLTVILTAR------DVER---GQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWF  101 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~G~~V~l~~r------~~~~---~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~  101 (302)
                      |+||||||+|.||.+++++|++.|++|+.++|      ....   .....+.+.  ..++.++.+|++|.+.+.+++...
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~l~~~~~~~   80 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELT--GRSVEFEEMDILDQGALQRLFKKY   80 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHH--TCCCEEEECCTTCHHHHHHHHHHC
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhc--CCCcEEEEeecccccccccccccc
Confidence            67899999999999999999999999999864      1111   112222222  357899999999999998888754


Q ss_pred             HhhCCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCccccc
Q 022103          102 KSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKS  181 (302)
Q Consensus       102 ~~~~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~  181 (302)
                           .+++++|+|+.....   ...++....+++|+.++.++++++...     ...+++++||.............. 
T Consensus        81 -----~~~~i~h~Aa~~~~~---~~~~~p~~~~~~Nv~gt~~l~~~~~~~-----~v~~~i~~ss~~~~~~~~~~~~~~-  146 (346)
T d1ek6a_          81 -----SFMAVIHFAGLKAVG---ESVQKPLDYYRVNLTGTIQLLEIMKAH-----GVKNLVFSSSATVYGNPQYLPLDE-  146 (346)
T ss_dssp             -----CEEEEEECCSCCCHH---HHHHCHHHHHHHHHHHHHHHHHHHHHT-----TCCEEEEEEEGGGGCSCSSSSBCT-
T ss_pred             -----ccccccccccccCcH---hhHhCHHHHHHhhhcccccccchhhhc-----Ccccccccccceeeeccccccccc-
Confidence                 788999999976432   334456778999999999998887543     457899998876654433221100 


Q ss_pred             ccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCC
Q 022103          182 ILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTS  257 (302)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~  257 (302)
                                                   ..........|+.+|.+.+..++.++..  ..++....+.|+.+..+
T Consensus       147 -----------------------------~~~~~~~~~~Y~~~k~~~e~~~~~~~~~--~~~~~~~~lR~~~v~G~  191 (346)
T d1ek6a_         147 -----------------------------AHPTGGCTNPYGKSKFFIEEMIRDLCQA--DKTWNAVLLRYFNPTGA  191 (346)
T ss_dssp             -----------------------------TSCCCCCSSHHHHHHHHHHHHHHHHHHH--CTTCEEEEEEECEEECC
T ss_pred             -----------------------------cccccccCChHHHHHHHHHHHHHHHHHh--ccCCceEEEeecceecc
Confidence                                         0111223467999999999999988765  35788888888777654

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.59  E-value=2.9e-14  Score=130.23  Aligned_cols=185  Identities=15%  Similarity=-0.010  Sum_probs=131.1

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      -+++-.||||||+|.||.+++++|.++|++|++++|.....      ....-....+..+|+.+.+.+..+++       
T Consensus        12 ~~~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~------~~~~~~~~~~~~~D~~~~~~~~~~~~-------   78 (363)
T d2c5aa1          12 PSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEH------MTEDMFCDEFHLVDLRVMENCLKVTE-------   78 (363)
T ss_dssp             TTSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSS------SCGGGTCSEEEECCTTSHHHHHHHHT-------
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccc------hhhhcccCcEEEeechhHHHHHHHhh-------
Confidence            34566799999999999999999999999999998754321      00011245778899999988766654       


Q ss_pred             CccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchh
Q 022103          107 ALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDE  186 (302)
Q Consensus       107 ~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~  186 (302)
                      .+|.++|+|+.....  ....+.....+.+|+.++.+++.++...     ...++|++||..........+..     ++
T Consensus        79 ~~d~Vih~a~~~~~~--~~~~~~~~~~~~~n~~gt~~ll~~~~~~-----~vk~~i~~SS~~~~~~~~~~~~~-----~~  146 (363)
T d2c5aa1          79 GVDHVFNLAADMGGM--GFIQSNHSVIMYNNTMISFNMIEAARIN-----GIKRFFYASSACIYPEFKQLETT-----NV  146 (363)
T ss_dssp             TCSEEEECCCCCCCH--HHHTTCHHHHHHHHHHHHHHHHHHHHHT-----TCSEEEEEEEGGGSCGGGSSSSS-----SC
T ss_pred             cCCeEeecccccccc--cccccccccccccccchhhHHHHhHHhh-----Ccccccccccccccccccccccc-----cc
Confidence            689999999876431  1223456677899999999999888664     46789999997765433221100     00


Q ss_pred             hhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCC
Q 022103          187 ELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSM  258 (302)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~  258 (302)
                                         ...+.+.....+...|+.+|.+.|.+++.+.++   .|+++..+.|+.+..+.
T Consensus       147 -------------------~~~~~e~~~~~p~~~Yg~sK~~~E~~~~~~~~~---~gl~~~ilR~~~vyG~~  196 (363)
T d2c5aa1         147 -------------------SLKESDAWPAEPQDAFGLEKLATEELCKHYNKD---FGIECRIGRFHNIYGPF  196 (363)
T ss_dssp             -------------------EECGGGGSSBCCSSHHHHHHHHHHHHHHHHHHH---HCCEEEEEEECCEECTT
T ss_pred             -------------------ccccccCCcCCCCCHHHHHHHHHHHHHHHHHHH---hCCCEEEEEeeeEeccC
Confidence                               000011111222467999999999999999987   48999999999998765

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=99.59  E-value=8.9e-15  Score=131.74  Aligned_cols=198  Identities=18%  Similarity=0.161  Sum_probs=139.8

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCEE------EEEecCh--hhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHh
Q 022103           32 IAIVTGANKGIGFALVKRLAELGLTV------ILTARDV--ERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKS  103 (302)
Q Consensus        32 ~vlItGas~gIG~ala~~l~~~G~~V------~l~~r~~--~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~  103 (302)
                      +||||||+|.||.++++.|.++|+.|      +.+++..  .+... ...+ ....++.++.+|+++...+.....    
T Consensus         2 kIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~-~~~~-~~~~~~~~~~~d~~~~~~~~~~~~----   75 (322)
T d1r6da_           2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRAN-LAPV-DADPRLRFVHGDIRDAGLLARELR----   75 (322)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGG-GGGG-TTCTTEEEEECCTTCHHHHHHHTT----
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhH-hhhh-hcCCCeEEEEeccccchhhhcccc----
Confidence            38999999999999999999999754      3343321  11111 1111 223578999999999987764433    


Q ss_pred             hCCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCccccccc
Q 022103          104 NFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSIL  183 (302)
Q Consensus       104 ~~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~  183 (302)
                         .+|.++|+|+.....   ...+..+..+++|+.++.++++++...     ...++|++||..........+      
T Consensus        76 ---~~d~vi~~a~~~~~~---~~~~~~~~~~~~N~~gt~~ll~~~~~~-----~~~~~I~~Ss~~~yg~~~~~~------  138 (322)
T d1r6da_          76 ---GVDAIVHFAAESHVD---RSIAGASVFTETNVQGTQTLLQCAVDA-----GVGRVVHVSTNQVYGSIDSGS------  138 (322)
T ss_dssp             ---TCCEEEECCSCCCHH---HHHHCCHHHHHHHTHHHHHHHHHHHHT-----TCCEEEEEEEGGGGCCCSSSC------
T ss_pred             ---ccceEEeeccccccc---ccccchHHHhhhhHHHHHHHHHHHHHc-----CCceEEEeecceeecCCCCCC------
Confidence               789999999886432   344555677899999999999988653     457899999977654332211      


Q ss_pred             chhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC-
Q 022103          184 EDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ-  262 (302)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~-  262 (302)
                                               +.+.....+...|+.+|.+.|.+++.++++   .|+++..+.|+.+..+..... 
T Consensus       139 -------------------------~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~vyGp~~~~~~  190 (322)
T d1r6da_         139 -------------------------WTESSPLEPNSPYAASKAGSDLVARAYHRT---YGLDVRITRCCNNYGPYQHPEK  190 (322)
T ss_dssp             -------------------------BCTTSCCCCCSHHHHHHHHHHHHHHHHHHH---HCCCEEEEEECEEECTTCCTTS
T ss_pred             -------------------------CCCCCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCCEEEEEeeeEECcCCCcCc
Confidence                                     111112223468999999999999999987   579999999999987653321 


Q ss_pred             ------------------C-------CCCHHHHHHHHHHHhhc
Q 022103          263 ------------------G-------SHTADEAADVGARLLLL  280 (302)
Q Consensus       263 ------------------~-------~~~~~~~a~~~~~l~~~  280 (302)
                                        +       ....+++|..+..++..
T Consensus       191 ~i~~~i~~~~~~~~i~v~~~g~~~r~~i~v~D~a~ai~~~~~~  233 (322)
T d1r6da_         191 LIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAG  233 (322)
T ss_dssp             HHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCcEEecCCCeEEccEEHHHHHHHHHHHHhC
Confidence                              0       14578999988888864

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=99.55  E-value=1.1e-13  Score=127.29  Aligned_cols=190  Identities=15%  Similarity=0.070  Sum_probs=132.1

Q ss_pred             EEEEeCCCchHHHHHHHHHHH-cCCEEEEEec---------ChhhHHHHHHHHhhC--------CCceeEEEeeCCCHHH
Q 022103           32 IAIVTGANKGIGFALVKRLAE-LGLTVILTAR---------DVERGQRAVESLSEK--------GLPVNFFQLDVSDPSS   93 (302)
Q Consensus        32 ~vlItGas~gIG~ala~~l~~-~G~~V~l~~r---------~~~~~~~~~~~l~~~--------~~~~~~~~~Dlt~~~~   93 (302)
                      .||||||+|.||.+++++|++ .|++|+++++         ..+..+.....+...        ...+.++.+|++|.+.
T Consensus         4 KVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~   83 (383)
T d1gy8a_           4 RVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNEDF   83 (383)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCHHH
T ss_pred             EEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCHHH
Confidence            389999999999999999986 5899999874         122333333333321        2356789999999999


Q ss_pred             HHHHHHHHHhhCCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCccccc
Q 022103           94 IEAFVSWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSK  173 (302)
Q Consensus        94 ~~~~~~~~~~~~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~  173 (302)
                      ++++++..    ..+|+|+|+|+.....   ...+.....+++|+.++.++++++...     ...+++++++.......
T Consensus        84 l~~~~~~~----~~~d~ViH~Aa~~~~~---~~~~~~~~~~~~N~~~t~~~l~~~~~~-----~~~~~~~~~s~~~~~~~  151 (383)
T d1gy8a_          84 LNGVFTRH----GPIDAVVHMCAFLAVG---ESVRDPLKYYDNNVVGILRLLQAMLLH-----KCDKIIFSSSAAIFGNP  151 (383)
T ss_dssp             HHHHHHHS----CCCCEEEECCCCCCHH---HHHHCHHHHHHHHHHHHHHHHHHHHHT-----TCCEEEEEEEGGGTBSC
T ss_pred             hhhhhhcc----ceeehhhccccccccc---ccccccccccccccccccccchhhhcc-----CCccccccccccccccc
Confidence            88888754    5789999999986432   233455678899999999999888654     35677777766554322


Q ss_pred             ccCcccccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCc
Q 022103          174 VRNPNIKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGF  253 (302)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~  253 (302)
                      ......                        ...........+.+...|+.+|.+.+.+++.+...   +|+++..+.|+.
T Consensus       152 ~~~~~~------------------------~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~---~gl~~~~lR~~~  204 (383)
T d1gy8a_         152 TMGSVS------------------------TNAEPIDINAKKSPESPYGESKLIAERMIRDCAEA---YGIKGICLRYFN  204 (383)
T ss_dssp             CC-----------------------------CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHH---HCCEEEEEEECE
T ss_pred             cccccc------------------------ccccccccccCCCCCCHHHhhHhHHHHHHHHHHHH---hCCCEEEEecce
Confidence            211000                        00001111222334578999999999999999887   589999999999


Q ss_pred             ccCCCCC
Q 022103          254 TQTSMTQ  260 (302)
Q Consensus       254 v~T~~~~  260 (302)
                      +..+...
T Consensus       205 vyG~~~~  211 (383)
T d1gy8a_         205 ACGAHED  211 (383)
T ss_dssp             EECCCTT
T ss_pred             eeccCcc
Confidence            8876543

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.51  E-value=4.1e-13  Score=113.61  Aligned_cols=197  Identities=17%  Similarity=0.079  Sum_probs=132.5

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHcCCE--EEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCc
Q 022103           31 TIAIVTGANKGIGFALVKRLAELGLT--VILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAAL  108 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~G~~--V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~i  108 (302)
                      ++||||||+|+||+++++.|+++|++  |+.+.|++++...       ...++.++.+|+++.+++.++++       .+
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~-------~~~~~~~~~~d~~~~~~~~~~~~-------~~   69 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEK-------IGGEADVFIGDITDADSINPAFQ-------GI   69 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHH-------TTCCTTEEECCTTSHHHHHHHHT-------TC
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHh-------ccCCcEEEEeeeccccccccccc-------cc
Confidence            79999999999999999999999964  6667888765432       23468899999999999887776       68


Q ss_pred             cEEEEcCCCCCCC----------CCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcc
Q 022103          109 DILVNNAGVSFND----------IYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPN  178 (302)
Q Consensus       109 d~lv~~aG~~~~~----------~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~  178 (302)
                      |.++|+++.....          ........+.....+|+.+...+.......     ..+...+.++.....+....  
T Consensus        70 d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~s~~~~~~~~~~~--  142 (252)
T d2q46a1          70 DALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA-----GVKHIVVVGSMGGTNPDHPL--  142 (252)
T ss_dssp             SEEEECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH-----TCSEEEEEEETTTTCTTCGG--
T ss_pred             eeeEEEEeeccccccccchhhhhhcccccccchhhhccccccceeeccccccc-----cccccccccccccCCCCccc--
Confidence            9999999865321          112223445567788999998888776654     34677777765554322111  


Q ss_pred             cccccchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCC
Q 022103          179 IKSILEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSM  258 (302)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~  258 (302)
                                                             ...+...+.........+..+   .|+++..++||.+..+.
T Consensus       143 ---------------------------------------~~~~~~~~~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~  180 (252)
T d2q46a1         143 ---------------------------------------NKLGNGNILVWKRKAEQYLAD---SGTPYTIIRAGGLLDKE  180 (252)
T ss_dssp             ---------------------------------------GGGGGCCHHHHHHHHHHHHHH---SSSCEEEEEECEEECSC
T ss_pred             ---------------------------------------ccccccchhhhhhhhhhhhhc---ccccceeecceEEECCC
Confidence                                                   111222222233333333443   68999999999997765


Q ss_pred             CCCC---------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeec
Q 022103          259 TQGQ---------------GSHTADEAADVGARLLLLHPQQLPTAKFYIG  293 (302)
Q Consensus       259 ~~~~---------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~  293 (302)
                      ....               ...+.+++|..++..+..+.   ..|+.|..
T Consensus       181 ~~~~~~~~~~~~~~~~~~~~~i~~~Dva~a~~~~l~~~~---~~g~~~~i  227 (252)
T d2q46a1         181 GGVRELLVGKDDELLQTDTKTVPRADVAEVCIQALLFEE---AKNKAFDL  227 (252)
T ss_dssp             TTSSCEEEESTTGGGGSSCCEEEHHHHHHHHHHHTTCGG---GTTEEEEE
T ss_pred             cchhhhhhccCcccccCCCCeEEHHHHHHHHHHHhCCcc---ccCcEEEE
Confidence            3321               23667999999999886332   35766654

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.50  E-value=3.6e-14  Score=122.37  Aligned_cols=182  Identities=16%  Similarity=0.057  Sum_probs=130.2

Q ss_pred             cccccCcEEEEeCCCchHHHHHHHHHHHcCC--EEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHH
Q 022103           25 KWWSKETIAIVTGANKGIGFALVKRLAELGL--TVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFK  102 (302)
Q Consensus        25 ~~~~~~k~vlItGas~gIG~ala~~l~~~G~--~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~  102 (302)
                      .+.|++|+||||||||.||.++++.|.++|.  +|++++|++.....      .....+....+|+.+.+++...+    
T Consensus         9 ~~~m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~------~~~~~i~~~~~D~~~~~~~~~~~----   78 (232)
T d2bkaa1           9 DFRMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDE------EAYKNVNQEVVDFEKLDDYASAF----   78 (232)
T ss_dssp             HHHHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCS------GGGGGCEEEECCGGGGGGGGGGG----
T ss_pred             HhCCCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcc------cccceeeeeeecccccccccccc----
Confidence            4568899999999999999999999999995  89999997643211      11125667778888776654333    


Q ss_pred             hhCCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccc
Q 022103          103 SNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSI  182 (302)
Q Consensus       103 ~~~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~  182 (302)
                         ..+|+++|++|...      ..........+|+.++..+++.+..    . +..++|++|+.......         
T Consensus        79 ---~~~d~vi~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~a~~----~-~v~~fi~~Ss~~~~~~~---------  135 (232)
T d2bkaa1          79 ---QGHDVGFCCLGTTR------GKAGAEGFVRVDRDYVLKSAELAKA----G-GCKHFNLLSSKGADKSS---------  135 (232)
T ss_dssp             ---SSCSEEEECCCCCH------HHHHHHHHHHHHTHHHHHHHHHHHH----T-TCCEEEEECCTTCCTTC---------
T ss_pred             ---cccccccccccccc------cccchhhhhhhcccccceeeecccc----c-CccccccCCccccccCc---------
Confidence               36899999998742      2344556788899999998887744    2 56789999987654211         


Q ss_pred             cchhhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCc-EEEEeecCcccCCCCCC
Q 022103          183 LEDEELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGI-SVNSYCPGFTQTSMTQG  261 (302)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI-~V~~v~PG~v~T~~~~~  261 (302)
                                                         ...|+.+|...|...+.       .|. ++..+.||.+..+....
T Consensus       136 -----------------------------------~~~Y~~~K~~~E~~l~~-------~~~~~~~IlRP~~i~G~~~~~  173 (232)
T d2bkaa1         136 -----------------------------------NFLYLQVKGEVEAKVEE-------LKFDRYSVFRPGVLLCDRQES  173 (232)
T ss_dssp             -----------------------------------SSHHHHHHHHHHHHHHT-------TCCSEEEEEECCEEECTTGGG
T ss_pred             -----------------------------------cchhHHHHHHhhhcccc-------ccccceEEecCceeecCCCcC
Confidence                                               14599999998876543       233 57788999998764221


Q ss_pred             C--------------------CCCCHHHHHHHHHHHhhcC
Q 022103          262 Q--------------------GSHTADEAADVGARLLLLH  281 (302)
Q Consensus       262 ~--------------------~~~~~~~~a~~~~~l~~~~  281 (302)
                      .                    ..++.+++|..++..+..+
T Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~I~~~dvA~a~i~~~~~~  213 (232)
T d2bkaa1         174 RPGEWLVRKFFGSLPDSWASGHSVPVVTVVRAMLNNVVRP  213 (232)
T ss_dssp             SHHHHHHHHHHCSCCTTGGGGTEEEHHHHHHHHHHHHTSC
T ss_pred             cHHHHHHHHHhhccCCcccCCCeEEHHHHHHHHHHHHhcC
Confidence            1                    1255689999888887633

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.32  E-value=1.8e-11  Score=107.66  Aligned_cols=193  Identities=10%  Similarity=0.053  Sum_probs=117.5

Q ss_pred             CcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhH----HHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           30 ETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERG----QRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        30 ~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~----~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      .++||||||+|.||++++++|.++|++|+++.|+....    ......+.  ...+.++.+|++|.+.+.+.+.      
T Consensus         3 k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~--~~~v~~v~~d~~d~~~~~~~~~------   74 (312)
T d1qyda_           3 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFK--QLGAKLIEASLDDHQRLVDALK------   74 (312)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHH--TTTCEEECCCSSCHHHHHHHHT------
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhc--cCCcEEEEeecccchhhhhhcc------
Confidence            45699999999999999999999999999999975321    12222222  3468899999999998877766      


Q ss_pred             CCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccch
Q 022103          106 AALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILED  185 (302)
Q Consensus       106 g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~  185 (302)
                       ..+.++++++.....              .|..+...++.++..    . ...++++.||..........+        
T Consensus        75 -~~~~~~~~~~~~~~~--------------~~~~~~~~~l~~a~~----~-~~~~~v~~Ss~g~~~~~~~~~--------  126 (312)
T d1qyda_          75 -QVDVVISALAGGVLS--------------HHILEQLKLVEAIKE----A-GNIKRFLPSEFGMDPDIMEHA--------  126 (312)
T ss_dssp             -TCSEEEECCCCSSSS--------------TTTTTHHHHHHHHHH----S-CCCSEEECSCCSSCTTSCCCC--------
T ss_pred             -Ccchhhhhhhhcccc--------------cchhhhhHHHHHHHH----h-cCCcEEEEeeccccCCCcccc--------
Confidence             568888888754221              233334444444432    2 346677777654332211110        


Q ss_pred             hhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC---
Q 022103          186 EELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ---  262 (302)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~---  262 (302)
                                                   ..+...|...|...+    .+..+   .++.+..+.|+.+..+.....   
T Consensus       127 -----------------------------~~~~~~~~~~~~~~~----~~~~~---~~~~~~i~r~~~~~g~~~~~~~~~  170 (312)
T d1qyda_         127 -----------------------------LQPGSITFIDKRKVR----RAIEA---ASIPYTYVSSNMFAGYFAGSLAQL  170 (312)
T ss_dssp             -----------------------------CSSTTHHHHHHHHHH----HHHHH---TTCCBCEEECCEEHHHHTTTSSCT
T ss_pred             -----------------------------cchhhhhhHHHHHHH----Hhhcc---cccceEEeccceeecCCccchhhH
Confidence                                         111133444444443    33333   567777788887754221110   


Q ss_pred             ---------------------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCc
Q 022103          263 ---------------------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDP  296 (302)
Q Consensus       263 ---------------------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~  296 (302)
                                           ..+..+++|..++.++.. + +..++.++...+.
T Consensus       171 ~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~l~~-~-~~~~~~~~~~~~~  223 (312)
T d1qyda_         171 DGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDD-P-QTLNKTMYIRPPM  223 (312)
T ss_dssp             TCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTC-G-GGSSSEEECCCGG
T ss_pred             HHHhhhcccccccccccccccceeeHHHHHHHHHHHhcC-c-cccCceEEEeCCC
Confidence                                 116789999999999863 2 3345555555443

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.28  E-value=4.8e-12  Score=106.78  Aligned_cols=170  Identities=16%  Similarity=0.070  Sum_probs=115.5

Q ss_pred             CcEEEEeCCCchHHHHHHHHHHHcCC--EEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           30 ETIAIVTGANKGIGFALVKRLAELGL--TVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        30 ~k~vlItGas~gIG~ala~~l~~~G~--~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      .|++|||||||.||++++++|.++|+  +|+...|+...          ...+   +..+..|..++.      ....+.
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~----------~~~~---~~~~~~d~~~~~------~~~~~~   62 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA----------EHPR---LDNPVGPLAELL------PQLDGS   62 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC----------CCTT---EECCBSCHHHHG------GGCCSC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchh----------hccc---ccccccchhhhh------hccccc
Confidence            48999999999999999999999997  67777776421          1112   334455544331      123357


Q ss_pred             ccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhh
Q 022103          108 LDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEE  187 (302)
Q Consensus       108 id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~  187 (302)
                      +|.+++++|.....     ...-+....+|+.++.++++.+..    . ...+++++||..+...               
T Consensus        63 ~d~vi~~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~a~~----~-~v~~~i~~Ss~~~~~~---------------  117 (212)
T d2a35a1          63 IDTAFCCLGTTIKE-----AGSEEAFRAVDFDLPLAVGKRALE----M-GARHYLVVSALGADAK---------------  117 (212)
T ss_dssp             CSEEEECCCCCHHH-----HSSHHHHHHHHTHHHHHHHHHHHH----T-TCCEEEEECCTTCCTT---------------
T ss_pred             hheeeeeeeeeccc-----cccccccccchhhhhhhccccccc----c-cccccccccccccccc---------------
Confidence            89999999875321     112346788899999998887643    2 5688999998765411               


Q ss_pred             hcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCc-EEEEeecCcccCCCCCCC----
Q 022103          188 LSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGI-SVNSYCPGFTQTSMTQGQ----  262 (302)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI-~V~~v~PG~v~T~~~~~~----  262 (302)
                                                   ....|..+|...|...+.       .+. ++..+.|+++..+.....    
T Consensus       118 -----------------------------~~~~y~~~K~~~E~~l~~-------~~~~~~~I~Rp~~v~G~~~~~~~~~~  161 (212)
T d2a35a1         118 -----------------------------SSIFYNRVKGELEQALQE-------QGWPQLTIARPSLLFGPREEFRLAEI  161 (212)
T ss_dssp             -----------------------------CSSHHHHHHHHHHHHHTT-------SCCSEEEEEECCSEESTTSCEEGGGG
T ss_pred             -----------------------------cccchhHHHHHHhhhccc-------cccccceeeCCcceeCCcccccHHHH
Confidence                                         125699999888765542       233 678889999976653211    


Q ss_pred             -----C--------CCCHHHHHHHHHHHhh
Q 022103          263 -----G--------SHTADEAADVGARLLL  279 (302)
Q Consensus       263 -----~--------~~~~~~~a~~~~~l~~  279 (302)
                           .        .+..+++|..++.++.
T Consensus       162 ~~~~~~~~~~~~~~~i~v~DvA~ai~~~~~  191 (212)
T d2a35a1         162 LAAPIARILPGKYHGIEACDLARALWRLAL  191 (212)
T ss_dssp             TTCCCC----CHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHhhccCCCCcEEEHHHHHHHHHHHHc
Confidence                 0        1455899999988876

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.26  E-value=4.4e-11  Score=104.11  Aligned_cols=188  Identities=16%  Similarity=0.150  Sum_probs=128.9

Q ss_pred             EEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCccEEE
Q 022103           33 AIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDILV  112 (302)
Q Consensus        33 vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id~lv  112 (302)
                      ||||||+|.||.+++++|.++|++|+.++|+.                     +|+.|.++++++++..     .+|+|+
T Consensus         4 IlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~---------------------~D~~d~~~~~~~l~~~-----~~d~vi   57 (281)
T d1vl0a_           4 ILITGANGQLGREIQKQLKGKNVEVIPTDVQD---------------------LDITNVLAVNKFFNEK-----KPNVVI   57 (281)
T ss_dssp             EEEESTTSHHHHHHHHHHTTSSEEEEEECTTT---------------------CCTTCHHHHHHHHHHH-----CCSEEE
T ss_pred             EEEECCCCHHHHHHHHHHHhCCCEEEEeechh---------------------ccCCCHHHHHHHHHHc-----CCCEEE
Confidence            89999999999999999999999999998863                     5899999999988876     789999


Q ss_pred             EcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhhcHHH
Q 022103          113 NNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQ  192 (302)
Q Consensus       113 ~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (302)
                      |+|+.....   ......+..+..|+.....+.......      ...+++.||..........+               
T Consensus        58 h~a~~~~~~---~~~~~~~~~~~~n~~~~~~~~~~~~~~------~~~~~~~ss~~v~~~~~~~~---------------  113 (281)
T d1vl0a_          58 NCAAHTAVD---KCEEQYDLAYKINAIGPKNLAAAAYSV------GAEIVQISTDYVFDGEAKEP---------------  113 (281)
T ss_dssp             ECCCCCCHH---HHHHCHHHHHHHHTHHHHHHHHHHHHH------TCEEEEEEEGGGSCSCCSSC---------------
T ss_pred             eeccccccc---cccccchhhcccccccccccccccccc------cccccccccceeeecccccc---------------
Confidence            999875432   233444567778888887776666543      34556665544332221111               


Q ss_pred             HHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC----------
Q 022103          193 IERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ----------  262 (302)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~----------  262 (302)
                                      ..+...+.+...|+.+|...+.+.+.       .+.++..+.|+.+..+-....          
T Consensus       114 ----------------~~e~~~~~~~~~~~~~k~~~e~~~~~-------~~~~~~i~R~~~vyG~~~~~~~~~~~~~~~~  170 (281)
T d1vl0a_         114 ----------------ITEFDEVNPQSAYGKTKLEGENFVKA-------LNPKYYIVRTAWLYGDGNNFVKTMINLGKTH  170 (281)
T ss_dssp             ----------------BCTTSCCCCCSHHHHHHHHHHHHHHH-------HCSSEEEEEECSEESSSSCHHHHHHHHHHHC
T ss_pred             ----------------ccccccccchhhhhhhhhHHHHHHHH-------hCCCccccceeEEeCCCcccccchhhhhccC
Confidence                            11222244457899999888776543       245677788988876542210          


Q ss_pred             -----------CCCCHHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          263 -----------GSHTADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       263 -----------~~~~~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                                 .....++++..+..++...    ..|.+.+..+..
T Consensus       171 ~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~----~~g~~~~~~~~~  212 (281)
T d1vl0a_         171 DELKVVHDQVGTPTSTVDLARVVLKVIDEK----NYGTFHCTCKGI  212 (281)
T ss_dssp             SEEEEESSCEECCEEHHHHHHHHHHHHHHT----CCEEEECCCBSC
T ss_pred             CceeecCCceeccchhhhhhhhhhhhhhhc----ccCceeEeCCCc
Confidence                       1256899999999888632    246666655543

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=99.21  E-value=2e-10  Score=103.73  Aligned_cols=191  Identities=13%  Similarity=0.021  Sum_probs=119.9

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHH-HHHHHHHHHhhCCC
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSS-IEAFVSWFKSNFAA  107 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~-~~~~~~~~~~~~g~  107 (302)
                      +.|+|+||||+|.||.+++++|.++|++|+++.|+..+...  +.+.. ...+.++.+|++|..+ ++.++       ..
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~--~~~~~-~~~v~~~~gD~~d~~~~~~~a~-------~~   71 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIA--EELQA-IPNVTLFQGPLLNNVPLMDTLF-------EG   71 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHH--HHHHT-STTEEEEESCCTTCHHHHHHHH-------TT
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhh--hhhcc-cCCCEEEEeeCCCcHHHHHHHh-------cC
Confidence            57999999999999999999999999999999998765432  22222 2368899999998654 33333       36


Q ss_pred             ccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhh
Q 022103          108 LDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEE  187 (302)
Q Consensus       108 id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~  187 (302)
                      .|.++++......               .++....+++.++..    . +..++++.||..........           
T Consensus        72 ~~~~~~~~~~~~~---------------~~~~~~~~~~~aa~~----a-gv~~~v~~Ss~~~~~~~~~~-----------  120 (350)
T d1xgka_          72 AHLAFINTTSQAG---------------DEIAIGKDLADAAKR----A-GTIQHYIYSSMPDHSLYGPW-----------  120 (350)
T ss_dssp             CSEEEECCCSTTS---------------CHHHHHHHHHHHHHH----H-SCCSEEEEEECCCGGGTSSC-----------
T ss_pred             CceEEeecccccc---------------hhhhhhhHHHHHHHH----h-CCCceEEEeeccccccCCcc-----------
Confidence            7777776543211               122233344444432    2 45678888886544322111           


Q ss_pred             hcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCCCCCC-----
Q 022103          188 LSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSMTQGQ-----  262 (302)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~~~~~-----  262 (302)
                                                   ....|..+|...+.+.+.       .+++...+.|+.+..++....     
T Consensus       121 -----------------------------~~~~~~~~k~~~~~~~~~-------~~~~~~~vr~~~~~~~~~~~~~~~~~  164 (350)
T d1xgka_         121 -----------------------------PAVPMWAPKFTVENYVRQ-------LGLPSTFVYAGIYNNNFTSLPYPLFQ  164 (350)
T ss_dssp             -----------------------------CCCTTTHHHHHHHHHHHT-------SSSCEEEEEECEEGGGCBSSSCSSCB
T ss_pred             -----------------------------cchhhhhhHHHHHHHHHh-------hccCceeeeeceeecccccccccccc
Confidence                                         124577788776655432       356777788887655432211     


Q ss_pred             ----------------CC-----CC-HHHHHHHHHHHhhcCCCCCCCcceeecCCcc
Q 022103          263 ----------------GS-----HT-ADEAADVGARLLLLHPQQLPTAKFYIGLDPF  297 (302)
Q Consensus       263 ----------------~~-----~~-~~~~a~~~~~l~~~~~~~~~~G~~~~~~~~~  297 (302)
                                      +.     .. .++++..+..++... .+...|++|...++.
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~Dva~~v~~~l~~~-~~~~~G~~~~~~g~~  220 (350)
T d1xgka_         165 MELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDG-PQKWNGHRIALTFET  220 (350)
T ss_dssp             EEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHC-HHHHTTCEEEECSEE
T ss_pred             ccccccccceeeecccCCCcceEEEeHHHHHHHHHHHHhCC-hhhcCCeEEEEeCCc
Confidence                            00     22 478999888887633 333578888776654

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.21  E-value=1.7e-10  Score=100.35  Aligned_cols=81  Identities=21%  Similarity=0.320  Sum_probs=63.3

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHH-----HHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHh
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQ-----RAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKS  103 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~-----~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~  103 (302)
                      +.|+||||||+|.||++++++|.++|++|++++|+.....     .....+.  ...+.++.+|+.+...+.+.++    
T Consensus         2 ~kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~----   75 (307)
T d1qyca_           2 SRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFK--ASGANIVHGSIDDHASLVEAVK----   75 (307)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHH--TTTCEEECCCTTCHHHHHHHHH----
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhc--cCCcEEEEeecccchhhhhhhh----
Confidence            4578999999999999999999999999999999754321     1222222  2457889999999998877776    


Q ss_pred             hCCCccEEEEcCCCC
Q 022103          104 NFAALDILVNNAGVS  118 (302)
Q Consensus       104 ~~g~id~lv~~aG~~  118 (302)
                         ..+.++++++..
T Consensus        76 ---~~~~vi~~~~~~   87 (307)
T d1qyca_          76 ---NVDVVISTVGSL   87 (307)
T ss_dssp             ---TCSEEEECCCGG
T ss_pred             ---hceeeeeccccc
Confidence               578899988753

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.20  E-value=3e-11  Score=105.68  Aligned_cols=140  Identities=17%  Similarity=0.175  Sum_probs=98.5

Q ss_pred             EEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCccEEE
Q 022103           33 AIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDILV  112 (302)
Q Consensus        33 vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id~lv  112 (302)
                      ||||||+|.||.++++.|.++|..|. ++++...                 +.+|++|.+.++++++..     ++|+||
T Consensus         3 ILItG~tGfiG~~l~~~L~~~g~~v~-~~~~~~~-----------------~~~Dl~~~~~~~~~i~~~-----~~D~Vi   59 (298)
T d1n2sa_           3 ILLFGKTGQVGWELQRSLAPVGNLIA-LDVHSKE-----------------FCGDFSNPKGVAETVRKL-----RPDVIV   59 (298)
T ss_dssp             EEEECTTSHHHHHHHHHTTTTSEEEE-ECTTCSS-----------------SCCCTTCHHHHHHHHHHH-----CCSEEE
T ss_pred             EEEECCCCHHHHHHHHHHHhCCCEEE-EECCCcc-----------------ccCcCCCHHHHHHHHHHc-----CCCEEE
Confidence            89999999999999999999986444 4444311                 347999999999998876     789999


Q ss_pred             EcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhhcHHH
Q 022103          113 NNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELSEEQ  192 (302)
Q Consensus       113 ~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (302)
                      |+||.....   ...+..+..+.+|+.+..++++++...      ..+++++||..........                
T Consensus        60 h~Aa~~~~~---~~~~~~~~~~~~n~~~~~~l~~~~~~~------~~~~~~~ss~~~~~~~~~~----------------  114 (298)
T d1n2sa_          60 NAAAHTAVD---KAESEPELAQLLNATSVEAIAKAANET------GAWVVHYSTDYVFPGTGDI----------------  114 (298)
T ss_dssp             ECCCCCCHH---HHTTCHHHHHHHHTHHHHHHHHHHTTT------TCEEEEEEEGGGSCCCTTC----------------
T ss_pred             Eeccccccc---ccccCccccccccccccccchhhhhcc------ccccccccccccccCCCCC----------------
Confidence            999976432   123344677899999999998887442      4678888776544332221                


Q ss_pred             HHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHH
Q 022103          193 IERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVL  235 (302)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~l  235 (302)
                                     ++.+...+.+...|+.+|.+.+.+.+..
T Consensus       115 ---------------~~~E~~~~~p~~~y~~~k~~~e~~~~~~  142 (298)
T d1n2sa_         115 ---------------PWQETDATSPLNVYGKTKLAGEKALQDN  142 (298)
T ss_dssp             ---------------CBCTTSCCCCSSHHHHHHHHHHHHHHHH
T ss_pred             ---------------CCccccccCCCchHhhhhhhhhhhHHhh
Confidence                           1112222334578999999888776543

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=99.05  E-value=6e-10  Score=97.42  Aligned_cols=170  Identities=16%  Similarity=0.168  Sum_probs=104.6

Q ss_pred             EEEeCCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHH--hhCCCcc
Q 022103           33 AIVTGANKGIGFALVKRLAELGL-TVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFK--SNFAALD  109 (302)
Q Consensus        33 vlItGas~gIG~ala~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~--~~~g~id  109 (302)
                      ||||||+|.||.++++.|+++|+ +|+++++-.... +... +.+      ...+|..+.+.+   .....  ..+..++
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~-~~~~-~~~------~~~~~~~~~~~~---~~~~~~~~~~~~~~   70 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGT-KFVN-LVD------LNIADYMDKEDF---LIQIMAGEEFGDVE   70 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGG-GGHH-HHT------SCCSEEEEHHHH---HHHHHTTCCCSSCC
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcc-hhhc-ccc------cchhhhccchHH---HHHHhhhhcccchh
Confidence            89999999999999999999996 587776322211 1111 111      111233333332   23222  2346788


Q ss_pred             EEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccchhhhc
Q 022103          110 ILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILEDEELS  189 (302)
Q Consensus       110 ~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~~~~~  189 (302)
                      .++|.|+.....     ....+.....|+.+...+++.+...      ..++++.||.....+......           
T Consensus        71 ~i~~~aa~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~------~i~~v~~ss~~~~~~~~~~~~-----------  128 (307)
T d1eq2a_          71 AIFHEGACSSTT-----EWDGKYMMDNNYQYSKELLHYCLER------EIPFLYASSAATYGGRTSDFI-----------  128 (307)
T ss_dssp             EEEECCSCCCTT-----CCCHHHHHHHTHHHHHHHHHHHHHH------TCCEEEEEEGGGGTTCCSCBC-----------
T ss_pred             hhhhhccccccc-----ccccccccccccccccccccccccc------ccccccccccccccccccccc-----------
Confidence            999998864321     1233456778888888888776553      234666666555544322110           


Q ss_pred             HHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEeecCcccCCC
Q 022103          190 EEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSYCPGFTQTSM  258 (302)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v~PG~v~T~~  258 (302)
                                          -..........|+.+|.+.+.+++.++.+   .++.+..+.|..+..+.
T Consensus       129 --------------------~~~~~~~~~~~Y~~~K~~~e~~~~~~~~~---~~~~~~~~r~~~vyGp~  174 (307)
T d1eq2a_         129 --------------------ESREYEKPLNVYGYSKFLFDEYVRQILPE---ANSQIVGFRYFNVYGPR  174 (307)
T ss_dssp             --------------------SSGGGCCCSSHHHHHHHHHHHHHHHHGGG---CSSCEEEEEECEEESSS
T ss_pred             --------------------ccccccccccccccccchhhhhccccccc---cccccccccceeEeecc
Confidence                                00111223478999999999999999877   57788888888776653

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.87  E-value=2.2e-13  Score=112.35  Aligned_cols=46  Identities=22%  Similarity=0.377  Sum_probs=41.6

Q ss_pred             EEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCC
Q 022103           33 AIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKG   78 (302)
Q Consensus        33 vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~   78 (302)
                      +.|+||+|+||+++|+.|++.|++|++.+|+++++++..+++....
T Consensus         3 i~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~i~~~~   48 (212)
T d1jaya_           3 VALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIA   48 (212)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHH
T ss_pred             EEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC
Confidence            5677888999999999999999999999999999999999887543

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.97  E-value=4.1e-05  Score=61.01  Aligned_cols=87  Identities=17%  Similarity=0.271  Sum_probs=64.3

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGL-TVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      ++++++++|.|+ |++|+.+++.|...|+ ++.++.|+.++.+...+++..   +  .     .+.+++.+.+.      
T Consensus        21 ~l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~---~--~-----~~~~~~~~~l~------   83 (159)
T d1gpja2          21 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGG---E--A-----VRFDELVDHLA------   83 (159)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTC---E--E-----CCGGGHHHHHH------
T ss_pred             CcccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhhc---c--c-----ccchhHHHHhc------
Confidence            589999999998 9999999999999998 699999999888888777631   1  1     22334444443      


Q ss_pred             CCccEEEEcCCCCCCCCCCCCHHHHHHHH
Q 022103          106 AALDILVNNAGVSFNDIYKNTVEHAETVI  134 (302)
Q Consensus       106 g~id~lv~~aG~~~~~~~~~~~e~~~~~~  134 (302)
                       ..|+||++.+...+-   ++.+.++..+
T Consensus        84 -~~Divi~atss~~~i---i~~~~i~~~~  108 (159)
T d1gpja2          84 -RSDVVVSATAAPHPV---IHVDDVREAL  108 (159)
T ss_dssp             -TCSEEEECCSSSSCC---BCHHHHHHHH
T ss_pred             -cCCEEEEecCCCCcc---ccHhhhHHHH
Confidence             689999998864332   4555555443

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.95  E-value=1.8e-05  Score=62.96  Aligned_cols=75  Identities=17%  Similarity=0.289  Sum_probs=56.9

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCc
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAAL  108 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~i  108 (302)
                      +.|.|+|.|+ |.+|+.+|+.|+++|++|++++|+.++.++.++..    ........+..+.......+.       ..
T Consensus         1 ~~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~----~~~~~~~~~~~~~~~~~~~i~-------~~   68 (182)
T d1e5qa1           1 ATKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGV----QHSTPISLDVNDDAALDAEVA-------KH   68 (182)
T ss_dssp             CCCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTC----TTEEEEECCTTCHHHHHHHHT-------TS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhcc----cccccccccccchhhhHhhhh-------cc
Confidence            3688999987 89999999999999999999999999887766543    345556667767666655544       45


Q ss_pred             cEEEEcC
Q 022103          109 DILVNNA  115 (302)
Q Consensus       109 d~lv~~a  115 (302)
                      |.++...
T Consensus        69 ~~~i~~~   75 (182)
T d1e5qa1          69 DLVISLI   75 (182)
T ss_dssp             SEEEECS
T ss_pred             ceeEeec
Confidence            6666544

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=97.89  E-value=5e-05  Score=61.62  Aligned_cols=85  Identities=22%  Similarity=0.183  Sum_probs=65.5

Q ss_pred             cccccCcEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHhhC--CCceeEEEeeCCCHHHHHHHHHHH
Q 022103           25 KWWSKETIAIVTGANKGIGFALVKRLAELGL-TVILTARDVERGQRAVESLSEK--GLPVNFFQLDVSDPSSIEAFVSWF  101 (302)
Q Consensus        25 ~~~~~~k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dlt~~~~~~~~~~~~  101 (302)
                      ..++++|+|+|.|+ ||.|++++..|++.|. +++++.|+.++.++....+...  .........|+.+.+++.....  
T Consensus        13 ~~~l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--   89 (182)
T d1vi2a1          13 GFDIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALA--   89 (182)
T ss_dssp             TCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHH--
T ss_pred             CCCcCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchhhhhc--
Confidence            45689999999999 6899999999999997 6899999987766655433221  1234566789999887766654  


Q ss_pred             HhhCCCccEEEEcCCC
Q 022103          102 KSNFAALDILVNNAGV  117 (302)
Q Consensus       102 ~~~~g~id~lv~~aG~  117 (302)
                           ..|++||+...
T Consensus        90 -----~~diiIN~Tp~  100 (182)
T d1vi2a1          90 -----SADILTNGTKV  100 (182)
T ss_dssp             -----TCSEEEECSST
T ss_pred             -----ccceeccccCC
Confidence                 68999999864

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=97.86  E-value=2e-05  Score=63.86  Aligned_cols=81  Identities=16%  Similarity=0.146  Sum_probs=57.3

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      -+|.+|+|+||+|++|.+.++.....|++|+.+.++.++.+...    +.+....   .|-.+++..+.+.+....  ..
T Consensus        28 ~~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~----~~Ga~~v---i~~~~~~~~~~~~~~~~~--~G   98 (182)
T d1v3va2          28 KGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLK----QIGFDAA---FNYKTVNSLEEALKKASP--DG   98 (182)
T ss_dssp             CSSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH----HTTCSEE---EETTSCSCHHHHHHHHCT--TC
T ss_pred             CCCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHHH----hhhhhhh---cccccccHHHHHHHHhhc--CC
Confidence            36899999999999999999999999999999999987654433    3343333   234444433333333322  46


Q ss_pred             ccEEEEcCCC
Q 022103          108 LDILVNNAGV  117 (302)
Q Consensus       108 id~lv~~aG~  117 (302)
                      +|+++.+.|.
T Consensus        99 vd~v~D~vG~  108 (182)
T d1v3va2          99 YDCYFDNVGG  108 (182)
T ss_dssp             EEEEEESSCH
T ss_pred             CceeEEecCc
Confidence            9999999985

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.78  E-value=5.8e-05  Score=60.51  Aligned_cols=80  Identities=19%  Similarity=0.264  Sum_probs=56.7

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCc
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAAL  108 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~i  108 (302)
                      +|.+|+|+||+|++|...++.....|++|+++.+++++.+.+ +++   |..-   ..|.++.+..+++.+....  ..+
T Consensus        28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~-~~~---Ga~~---vi~~~~~~~~~~i~~~t~~--~g~   98 (174)
T d1yb5a2          28 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIV-LQN---GAHE---VFNHREVNYIDKIKKYVGE--KGI   98 (174)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT---TCSE---EEETTSTTHHHHHHHHHCT--TCE
T ss_pred             CCCEEEEEeccccccccccccccccCcccccccccccccccc-ccc---Cccc---ccccccccHHHHhhhhhcc--CCc
Confidence            688999999999999999998888899999999987665433 333   4332   2366665544444333322  369


Q ss_pred             cEEEEcCCC
Q 022103          109 DILVNNAGV  117 (302)
Q Consensus       109 d~lv~~aG~  117 (302)
                      |+++.++|.
T Consensus        99 d~v~d~~g~  107 (174)
T d1yb5a2          99 DIIIEMLAN  107 (174)
T ss_dssp             EEEEESCHH
T ss_pred             eEEeecccH
Confidence            999988764

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=97.78  E-value=2.7e-05  Score=63.56  Aligned_cols=87  Identities=17%  Similarity=0.101  Sum_probs=58.7

Q ss_pred             CcEE-EEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHH-HhhCCC
Q 022103           30 ETIA-IVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWF-KSNFAA  107 (302)
Q Consensus        30 ~k~v-lItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~-~~~~g~  107 (302)
                      |.++ +++||+|++|.+.++..-..|++|+.+.|+.++.++..+.+++.|....+..-+... .++.+.+.++ ....+.
T Consensus        29 g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~lGad~vi~~~~~~~-~~~~~~v~~~~~~~g~~  107 (189)
T d1gu7a2          29 GKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNS-REFGPTIKEWIKQSGGE  107 (189)
T ss_dssp             TTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEEEEHHHHHC-GGGHHHHHHHHHHHTCC
T ss_pred             CCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhccccEEEeccccch-hHHHHHHHHHHhhccCC
Confidence            4444 457999999999988888889999999998888887777777666554333221122 2233333333 334467


Q ss_pred             ccEEEEcCCC
Q 022103          108 LDILVNNAGV  117 (302)
Q Consensus       108 id~lv~~aG~  117 (302)
                      +|+++.+.|.
T Consensus       108 vdvv~D~vg~  117 (189)
T d1gu7a2         108 AKLALNCVGG  117 (189)
T ss_dssp             EEEEEESSCH
T ss_pred             ceEEEECCCc
Confidence            9999998774

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.71  E-value=5.8e-05  Score=60.56  Aligned_cols=77  Identities=17%  Similarity=0.306  Sum_probs=59.1

Q ss_pred             cccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhh
Q 022103           25 KWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSN  104 (302)
Q Consensus        25 ~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~  104 (302)
                      ....+||.|+|.|+ ||.+++++..|.+.|.+|.++.|+.++.+...+.+...+ .+..+  +..+.            .
T Consensus        13 ~~~~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~-~~~~~--~~~~~------------~   76 (170)
T d1nyta1          13 SFIRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTG-SIQAL--SMDEL------------E   76 (170)
T ss_dssp             TCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGS-SEEEC--CSGGG------------T
T ss_pred             CCCCCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhcc-ccccc--ccccc------------c
Confidence            46688999999998 789999999999999999999999999998888776543 22222  22211            1


Q ss_pred             CCCccEEEEcCCC
Q 022103          105 FAALDILVNNAGV  117 (302)
Q Consensus       105 ~g~id~lv~~aG~  117 (302)
                      ....|++||+...
T Consensus        77 ~~~~dliIN~Tp~   89 (170)
T d1nyta1          77 GHEFDLIINATSS   89 (170)
T ss_dssp             TCCCSEEEECCSC
T ss_pred             ccccceeeccccc
Confidence            1368999999753

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.69  E-value=8.2e-05  Score=59.81  Aligned_cols=80  Identities=18%  Similarity=0.201  Sum_probs=55.7

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCc
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAAL  108 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~i  108 (302)
                      +|.+|+|+||+|++|...++.+...|++|+++.++.++.+.    +.+.|...   ..|-.+++-.+++.+...  ...+
T Consensus        25 ~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~----l~~~Ga~~---vi~~~~~~~~~~v~~~t~--~~g~   95 (183)
T d1pqwa_          25 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREM----LSRLGVEY---VGDSRSVDFADEILELTD--GYGV   95 (183)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHH----HHTTCCSE---EEETTCSTHHHHHHHHTT--TCCE
T ss_pred             CCCEEEEECCCCCcccccchhhccccccceeeecccccccc----cccccccc---cccCCccCHHHHHHHHhC--CCCE
Confidence            57899999999999999999888889999999998866543    33344432   234455543333322221  2369


Q ss_pred             cEEEEcCCC
Q 022103          109 DILVNNAGV  117 (302)
Q Consensus       109 d~lv~~aG~  117 (302)
                      |+++.++|.
T Consensus        96 d~v~d~~g~  104 (183)
T d1pqwa_          96 DVVLNSLAG  104 (183)
T ss_dssp             EEEEECCCT
T ss_pred             EEEEecccc
Confidence            999999884

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=97.69  E-value=6.8e-05  Score=60.16  Aligned_cols=81  Identities=15%  Similarity=0.230  Sum_probs=58.4

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      .+|.+|+|+||+|++|...++.....|++|++++++.++.+... ++   |.+   ...|-++++-.+++.+ +- ....
T Consensus        27 ~~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~-~l---Ga~---~vi~~~~~d~~~~v~~-~t-~g~g   97 (179)
T d1qora2          27 KPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSAL-KA---GAW---QVINYREEDLVERLKE-IT-GGKK   97 (179)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HH---TCS---EEEETTTSCHHHHHHH-HT-TTCC
T ss_pred             CCCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHH-hc---CCe---EEEECCCCCHHHHHHH-Hh-CCCC
Confidence            35889999999999999999999889999999999998876544 33   323   2246666543333322 21 2246


Q ss_pred             ccEEEEcCCC
Q 022103          108 LDILVNNAGV  117 (302)
Q Consensus       108 id~lv~~aG~  117 (302)
                      +|+++.++|.
T Consensus        98 ~d~v~d~~g~  107 (179)
T d1qora2          98 VRVVYDSVGR  107 (179)
T ss_dssp             EEEEEECSCG
T ss_pred             eEEEEeCccH
Confidence            8999998875

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=97.67  E-value=0.00033  Score=54.77  Aligned_cols=112  Identities=15%  Similarity=0.195  Sum_probs=68.2

Q ss_pred             CcEEEEeCCCchHHHHHHHHHHHcC--CEEEEEecChhhHHHHHHHHhhC---CCceeEEEeeCCCHHHHHHHHHHHHhh
Q 022103           30 ETIAIVTGANKGIGFALVKRLAELG--LTVILTARDVERGQRAVESLSEK---GLPVNFFQLDVSDPSSIEAFVSWFKSN  104 (302)
Q Consensus        30 ~k~vlItGas~gIG~ala~~l~~~G--~~V~l~~r~~~~~~~~~~~l~~~---~~~~~~~~~Dlt~~~~~~~~~~~~~~~  104 (302)
                      .+.+.|.|+ |.+|..+|..|+.+|  .+|++++++.++.+..+..+.+.   .........|.   ++           
T Consensus         5 ~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~---~~-----------   69 (146)
T d1ez4a1           5 HQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEY---SD-----------   69 (146)
T ss_dssp             BCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCG---GG-----------
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccH---HH-----------
Confidence            457788896 889999999999998  48999999988776555555432   22334444443   22           


Q ss_pred             CCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEec
Q 022103          105 FAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNIS  165 (302)
Q Consensus       105 ~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vs  165 (302)
                      ....|++|.++|....+     -+.-.+.+..|.    .+.+.+.+.+.+....+-++++|
T Consensus        70 ~~~adivvitag~~~~~-----g~~r~~l~~~N~----~i~~~~~~~i~~~~p~aivivvt  121 (146)
T d1ez4a1          70 CKDADLVVITAGAPQKP-----GESRLDLVNKNL----NILSSIVKPVVDSGFDGIFLVAA  121 (146)
T ss_dssp             GTTCSEEEECCCC---------------CHHHHH----HHHHHHHHHHHHTTCCSEEEECS
T ss_pred             hccccEEEEecccccCC-----CCCHHHHHHHHH----HHHHHHHHHHhhcCCCcEEEEeC
Confidence            13679999999975432     123334455554    34555555555553445555554

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.63  E-value=9.4e-05  Score=56.58  Aligned_cols=71  Identities=20%  Similarity=0.320  Sum_probs=56.9

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCccEE
Q 022103           32 IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDIL  111 (302)
Q Consensus        32 ~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id~l  111 (302)
                      +++|.|+ |-+|+.+++.|.++|+.|+++++++++.+...+++     ...++.+|.++++.++++-      ....|.+
T Consensus         2 ~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~-----~~~vi~Gd~~~~~~l~~~~------i~~a~~v   69 (132)
T d1lssa_           2 YIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEI-----DALVINGDCTKIKTLEDAG------IEDADMY   69 (132)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC-----SSEEEESCTTSHHHHHHTT------TTTCSEE
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhh-----hhhhccCcccchhhhhhcC------hhhhhhh
Confidence            4789998 88999999999999999999999998877655432     4578899999999776542      2367777


Q ss_pred             EEc
Q 022103          112 VNN  114 (302)
Q Consensus       112 v~~  114 (302)
                      +..
T Consensus        70 v~~   72 (132)
T d1lssa_          70 IAV   72 (132)
T ss_dssp             EEC
T ss_pred             ccc
Confidence            764

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=97.63  E-value=0.00016  Score=57.45  Aligned_cols=83  Identities=22%  Similarity=0.271  Sum_probs=56.4

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC-C
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF-A  106 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~-g  106 (302)
                      -+|.+++|+| +|+||...+..+...|++|++++++.++++.+.+ +   +.... +..|-. .++.....+.+.... .
T Consensus        25 ~~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~-~---ga~~~-~~~~~~-~~~~~~~~~~~~~~~g~   97 (170)
T d1e3ja2          25 QLGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKN-C---GADVT-LVVDPA-KEEESSIIERIRSAIGD   97 (170)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-T---TCSEE-EECCTT-TSCHHHHHHHHHHHSSS
T ss_pred             CCCCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHHHH-c---CCcEE-Eecccc-ccccchhhhhhhccccc
Confidence            3578999997 5899999999988889999999999988665433 2   33322 222222 122333444444433 4


Q ss_pred             CccEEEEcCCC
Q 022103          107 ALDILVNNAGV  117 (302)
Q Consensus       107 ~id~lv~~aG~  117 (302)
                      .+|++|.++|.
T Consensus        98 g~D~vid~~g~  108 (170)
T d1e3ja2          98 LPNVTIDCSGN  108 (170)
T ss_dssp             CCSEEEECSCC
T ss_pred             CCceeeecCCC
Confidence            68999999986

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.58  E-value=7.2e-05  Score=60.56  Aligned_cols=108  Identities=20%  Similarity=0.167  Sum_probs=69.4

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      .+|.+|||+||+||+|....+.....|++|+.+.++.++.+.+.+ +   |.+..+   |-.+  ...+.....  ..+.
T Consensus        30 ~~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~~-l---Ga~~vi---~~~~--~~~~~~~~~--~~~g   98 (176)
T d1xa0a2          30 PERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRV-L---GAKEVL---ARED--VMAERIRPL--DKQR   98 (176)
T ss_dssp             GGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHH-T---TCSEEE---ECC-----------C--CSCC
T ss_pred             CCCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHHh-c---ccceee---ecch--hHHHHHHHh--hccC
Confidence            458899999999999999998888889999999999888655432 2   434322   2221  112222221  2257


Q ss_pred             ccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccc
Q 022103          108 LDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKV  174 (302)
Q Consensus       108 id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~  174 (302)
                      +|+++.+.|..       +   +...+               ..|+.   .||++.++...+.....
T Consensus        99 vD~vid~vgg~-------~---~~~~l---------------~~l~~---~Griv~~G~~~g~~~~~  137 (176)
T d1xa0a2          99 WAAAVDPVGGR-------T---LATVL---------------SRMRY---GGAVAVSGLTGGAEVPT  137 (176)
T ss_dssp             EEEEEECSTTT-------T---HHHHH---------------HTEEE---EEEEEECSCCSSSCCCC
T ss_pred             cCEEEEcCCch-------h---HHHHH---------------HHhCC---CceEEEeecccCcccCC
Confidence            99999999863       1   22222               22443   59999999887765543

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=97.56  E-value=0.00016  Score=58.00  Aligned_cols=78  Identities=15%  Similarity=0.345  Sum_probs=60.5

Q ss_pred             cccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhh
Q 022103           25 KWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSN  104 (302)
Q Consensus        25 ~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~  104 (302)
                      .+..++|+|+|.|+ ||.+++++..|.+.+.+|.++.|+.++.+...+.+.... .+.....|-.              .
T Consensus        13 ~~~~~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~-~~~~~~~~~~--------------~   76 (171)
T d1p77a1          13 NWLRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYG-NIQAVSMDSI--------------P   76 (171)
T ss_dssp             TCCCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGS-CEEEEEGGGC--------------C
T ss_pred             CCCCCCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhcc-ccchhhhccc--------------c
Confidence            45688999999988 778999999999988899999999999999888886533 4444444322              1


Q ss_pred             CCCccEEEEcCCCC
Q 022103          105 FAALDILVNNAGVS  118 (302)
Q Consensus       105 ~g~id~lv~~aG~~  118 (302)
                      ....|++|++....
T Consensus        77 ~~~~diiIN~tp~g   90 (171)
T d1p77a1          77 LQTYDLVINATSAG   90 (171)
T ss_dssp             CSCCSEEEECCCC-
T ss_pred             ccccceeeeccccc
Confidence            24789999998653

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.56  E-value=0.00068  Score=52.95  Aligned_cols=116  Identities=17%  Similarity=0.200  Sum_probs=73.1

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCC--EEEEEecChhhHHHHHHHHhhC----CCceeEEEeeCCCHHHHHHHHHH
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGL--TVILTARDVERGQRAVESLSEK----GLPVNFFQLDVSDPSSIEAFVSW  100 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~--~V~l~~r~~~~~~~~~~~l~~~----~~~~~~~~~Dlt~~~~~~~~~~~  100 (302)
                      +..++.+.|.|+ |.+|..+|..|+..|.  +++++++++++.+..+..+.+.    ...+.+...|.   ++       
T Consensus         3 ~~~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~---~~-------   71 (148)
T d1ldna1           3 NNGGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDY---DD-------   71 (148)
T ss_dssp             TTTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCG---GG-------
T ss_pred             CCCCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCH---HH-------
Confidence            345678888897 8999999999999985  7999999998876666666542    22333433332   22       


Q ss_pred             HHhhCCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecC
Q 022103          101 FKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISS  166 (302)
Q Consensus       101 ~~~~~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS  166 (302)
                          +..-|++|.++|....+-  .+   -.+.+..|.    -+.+.+.+.+.+....+.++++|-
T Consensus        72 ----l~daDvvvitag~~~~~~--~~---R~dl~~~N~----~i~~~i~~~i~~~~p~a~~ivvtN  124 (148)
T d1ldna1          72 ----CRDADLVVICAGANQKPG--ET---RLDLVDKNI----AIFRSIVESVMASGFQGLFLVATN  124 (148)
T ss_dssp             ----TTTCSEEEECCSCCCCTT--TC---SGGGHHHHH----HHHHHHHHHHHHHTCCSEEEECSS
T ss_pred             ----hccceeEEEecccccccC--cc---hhHHHHHHH----HHHHHHHHHHHhhCCCceEEEecC
Confidence                236799999999764321  12   122344443    344555555555434566666653

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=97.47  E-value=0.00086  Score=53.12  Aligned_cols=117  Identities=17%  Similarity=0.168  Sum_probs=74.8

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCC--EEEEEecChhhHHHHHHHHhhC----CCceeEEEeeCCCHHHHHHHHH
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGL--TVILTARDVERGQRAVESLSEK----GLPVNFFQLDVSDPSSIEAFVS   99 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~--~V~l~~r~~~~~~~~~~~l~~~----~~~~~~~~~Dlt~~~~~~~~~~   99 (302)
                      ..++.+.+.|.|+ |.+|..+|..|+.+|.  ++++++++.+..+..+..+.+.    +.......   .+.+++     
T Consensus        16 ~~~~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~---~d~~~~-----   86 (160)
T d1i0za1          16 ATVPNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVAD---KDYSVT-----   86 (160)
T ss_dssp             CCCCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEEC---SSGGGG-----
T ss_pred             ccCCCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEec---cchhhc-----
Confidence            3345567888896 8999999999999986  7999999988776666555542    22222222   233332     


Q ss_pred             HHHhhCCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecC
Q 022103          100 WFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISS  166 (302)
Q Consensus       100 ~~~~~~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS  166 (302)
                            ..-|++|..||....+  ..+.   .+.+..|.    .+.+.+.+.+.+....+-++++|-
T Consensus        87 ------~~adiVVitAg~~~~~--g~tR---~~l~~~N~----~i~~~i~~~i~~~~p~aiiivvtN  138 (160)
T d1i0za1          87 ------ANSKIVVVTAGVRQQE--GESR---LNLVQRNV----NVFKFIIPQIVKYSPDCIIIVVSN  138 (160)
T ss_dssp             ------TTCSEEEECCSCCCCT--TCCG---GGGHHHHH----HHHHHHHHHHHHHCTTCEEEECSS
T ss_pred             ------ccccEEEEecCCcccc--Ccch---HHHHHHHH----HHHHHHHHHHHhcCCCcEEEEeCC
Confidence                  3679999999986432  1232   23444443    456666666666534566666654

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=97.43  E-value=0.00071  Score=52.78  Aligned_cols=116  Identities=13%  Similarity=0.112  Sum_probs=70.5

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHcCC--EEEEEecChhhHHHHHHHHhhC----CCceeEEEeeCCCHHHHHHHHHHHHhh
Q 022103           31 TIAIVTGANKGIGFALVKRLAELGL--TVILTARDVERGQRAVESLSEK----GLPVNFFQLDVSDPSSIEAFVSWFKSN  104 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~G~--~V~l~~r~~~~~~~~~~~l~~~----~~~~~~~~~Dlt~~~~~~~~~~~~~~~  104 (302)
                      |.+.|+|+ |.+|..+|..|+.+|.  ++++++++.++.+.....+.+.    .........|   .+++          
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d---~~~l----------   67 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVIND---WAAL----------   67 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESC---GGGG----------
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceeccC---HHHh----------
Confidence            56778895 8999999999999884  7999999988776555555432    2233333333   3322          


Q ss_pred             CCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecC
Q 022103          105 FAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISS  166 (302)
Q Consensus       105 ~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS  166 (302)
                       ..-|++|.+||.....-. ..-+.-.+.++.|.    .+.+.+.+.+.+....+-++++|-
T Consensus        68 -~~adiVVitaG~~~~~~~-~~g~~R~~l~~~N~----~i~~~i~~~i~~~~p~aivivvtN  123 (146)
T d1hyha1          68 -ADADVVISTLGNIKLQQD-NPTGDRFAELKFTS----SMVQSVGTNLKESGFHGVLVVISN  123 (146)
T ss_dssp             -TTCSEEEECCSCGGGTC--------CTTHHHHH----HHHHHHHHHHHHTTCCSEEEECSS
T ss_pred             -ccccEEEEeccccccccc-cCCccHHHHHHHHH----HHHHHHHHHHhhcCCCeEEEEecC
Confidence             268999999997542211 11122233455553    455666666666544556666553

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.42  E-value=0.00014  Score=50.58  Aligned_cols=43  Identities=26%  Similarity=0.366  Sum_probs=38.2

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRA   70 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~   70 (302)
                      .++.+++|+||+||+|....+.+...|++|+.+.++.++.+.+
T Consensus        30 ~~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~~   72 (77)
T d1o8ca2          30 PQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYL   72 (77)
T ss_dssp             GGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH
T ss_pred             cCCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHHH
Confidence            4688999999999999999998888899999999999887654

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=97.39  E-value=0.00035  Score=56.11  Aligned_cols=81  Identities=19%  Similarity=0.189  Sum_probs=54.4

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHhhCCCceeEEEeeCC--CHHHHHHHHHHHHhh
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGL-TVILTARDVERGQRAVESLSEKGLPVNFFQLDVS--DPSSIEAFVSWFKSN  104 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt--~~~~~~~~~~~~~~~  104 (302)
                      .+|.+|+|+|+ |+||...+..+...|+ +|+++++++++++.+ +++   |... ++  |..  +..+..+.+.+... 
T Consensus        27 ~~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a-~~l---Ga~~-vi--~~~~~~~~~~~~~i~~~~~-   97 (182)
T d1vj0a2          27 FAGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLA-EEI---GADL-TL--NRRETSVEERRKAIMDITH-   97 (182)
T ss_dssp             CBTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHH-HHT---TCSE-EE--ETTTSCHHHHHHHHHHHTT-
T ss_pred             CCCCEEEEECC-Cccchhheeccccccccccccccccccccccc-ccc---cceE-EE--eccccchHHHHHHHHHhhC-
Confidence            46899999997 8999999999988998 799999999887543 444   3332 22  333  23333222222221 


Q ss_pred             CCCccEEEEcCCC
Q 022103          105 FAALDILVNNAGV  117 (302)
Q Consensus       105 ~g~id~lv~~aG~  117 (302)
                      ...+|++|.++|.
T Consensus        98 ~~g~Dvvid~vG~  110 (182)
T d1vj0a2          98 GRGADFILEATGD  110 (182)
T ss_dssp             TSCEEEEEECSSC
T ss_pred             CCCceEEeecCCc
Confidence            1258999999987

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=97.32  E-value=0.0013  Score=51.55  Aligned_cols=114  Identities=13%  Similarity=0.130  Sum_probs=66.7

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCC---------EEEEEecChhhHHHHHHHHhhCCC-ceeEEEeeCCCHHHHHHHHHHH
Q 022103           32 IAIVTGANKGIGFALVKRLAELGL---------TVILTARDVERGQRAVESLSEKGL-PVNFFQLDVSDPSSIEAFVSWF  101 (302)
Q Consensus        32 ~vlItGas~gIG~ala~~l~~~G~---------~V~l~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dlt~~~~~~~~~~~~  101 (302)
                      .|.|+||+|.+|..++..|+..+.         +++...++.++++.....+..... ....+...-.+.+.        
T Consensus         6 KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------   77 (154)
T d1y7ta1           6 RVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATDDPKVA--------   77 (154)
T ss_dssp             EEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHH--------
T ss_pred             EEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccccccccccccCCchhhh--------
Confidence            799999999999999999998753         233344555566655555554332 22333333222222        


Q ss_pred             HhhCCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhc-CCCCCcEEEec
Q 022103          102 KSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRR-SPSKSRILNIS  165 (302)
Q Consensus       102 ~~~~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~-~~~~~~iv~vs  165 (302)
                         +...|++|.++|....  ...+.++   .+..|..    +++.+.+.+.+ .+....|+.+|
T Consensus        78 ---~~~advViitaG~~~~--pg~~r~d---l~~~N~~----i~~~~~~~i~k~a~~~~~vivvs  130 (154)
T d1y7ta1          78 ---FKDADYALLVGAAPRK--AGMERRD---LLQVNGK----IFTEQGRALAEVAKKDVKVLVVG  130 (154)
T ss_dssp             ---TTTCSEEEECCCCCCC--TTCCHHH---HHHHHHH----HHHHHHHHHHHHSCTTCEEEECS
T ss_pred             ---cccccEEEeecCcCCC--CCCcHHH---HHHHHHH----HHHHHHHHHHHhCCCCcEEEEec
Confidence               2378999999998643  2344444   3554543    45555555555 22235555554

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=97.30  E-value=0.0027  Score=49.13  Aligned_cols=111  Identities=16%  Similarity=0.087  Sum_probs=70.1

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCC--EEEEEecCh--hhHHHHHHHHhh---CCCceeEEEeeCCCHHHHHHHHHHHHhh
Q 022103           32 IAIVTGANKGIGFALVKRLAELGL--TVILTARDV--ERGQRAVESLSE---KGLPVNFFQLDVSDPSSIEAFVSWFKSN  104 (302)
Q Consensus        32 ~vlItGas~gIG~ala~~l~~~G~--~V~l~~r~~--~~~~~~~~~l~~---~~~~~~~~~~Dlt~~~~~~~~~~~~~~~  104 (302)
                      .+.|+|++|.+|.++|..|..+|.  ++++++...  +..+..+..+.+   ...+..+...|   .+++          
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~---~~~~----------   68 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGG---YEDT----------   68 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECC---GGGG----------
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCC---HHHh----------
Confidence            578999999999999999999985  799988643  333333333332   23344444433   2221          


Q ss_pred             CCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEec
Q 022103          105 FAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNIS  165 (302)
Q Consensus       105 ~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vs  165 (302)
                       ..-|++|.+||....+  ..+   ..+.++.|.    -+.+.+.+.+.+....+.++.+|
T Consensus        69 -~~aDiVvitaG~~~~~--g~~---R~dl~~~N~----~I~~~i~~~i~~~~p~~i~ivvt  119 (142)
T d1o6za1          69 -AGSDVVVITAGIPRQP--GQT---RIDLAGDNA----PIMEDIQSSLDEHNDDYISLTTS  119 (142)
T ss_dssp             -TTCSEEEECCCCCCCT--TCC---HHHHHHHHH----HHHHHHHHHHHTTCSCCEEEECC
T ss_pred             -hhcCEEEEeccccccc--CCc---hhhHHHHHH----HHHHHHHHHHHhcCCCceEEEec
Confidence             3689999999975432  223   344566554    46667777777664556666664

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.25  E-value=0.00055  Score=54.55  Aligned_cols=75  Identities=21%  Similarity=0.275  Sum_probs=52.9

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      -+|++|+|+||+|++|...++.+...|++|+.++++.++.+.. +++   |.+..   .|..+..      +++. ....
T Consensus        26 ~~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~-~~l---Ga~~~---i~~~~~~------~~~~-~~~g   91 (171)
T d1iz0a2          26 RPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALP-LAL---GAEEA---ATYAEVP------ERAK-AWGG   91 (171)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHH-HHT---TCSEE---EEGGGHH------HHHH-HTTS
T ss_pred             CCCCEEEEEeccccchhhhhhhhcccccccccccccccccccc-ccc---cccee---eehhhhh------hhhh-cccc
Confidence            4789999999999999999998888899999999988776543 333   33322   2333221      2222 2346


Q ss_pred             ccEEEEcCC
Q 022103          108 LDILVNNAG  116 (302)
Q Consensus       108 id~lv~~aG  116 (302)
                      +|+++.++|
T Consensus        92 ~D~v~d~~G  100 (171)
T d1iz0a2          92 LDLVLEVRG  100 (171)
T ss_dssp             EEEEEECSC
T ss_pred             ccccccccc
Confidence            999999877

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.23  E-value=0.0022  Score=50.61  Aligned_cols=82  Identities=20%  Similarity=0.271  Sum_probs=57.4

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGL-TVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      .+|.+|+|.|+ |++|...+..+...|+ +|+++++++++++.+ +++   |.+ .++..+-.+..+..+.++.-..  .
T Consensus        25 ~~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a-~~~---Ga~-~~~~~~~~~~~~~~~~~~~~~g--~   96 (171)
T d1pl8a2          25 TLGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKA-KEI---GAD-LVLQISKESPQEIARKVEGQLG--C   96 (171)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH-HHT---TCS-EEEECSSCCHHHHHHHHHHHHT--S
T ss_pred             CCCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHH-HHh---CCc-ccccccccccccccccccccCC--C
Confidence            35789999987 9999999999998998 799999999887744 333   322 2333333445444444443322  3


Q ss_pred             CccEEEEcCCC
Q 022103          107 ALDILVNNAGV  117 (302)
Q Consensus       107 ~id~lv~~aG~  117 (302)
                      .+|++|.++|.
T Consensus        97 g~Dvvid~~G~  107 (171)
T d1pl8a2          97 KPEVTIECTGA  107 (171)
T ss_dssp             CCSEEEECSCC
T ss_pred             CceEEEeccCC
Confidence            78999999986

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=97.22  E-value=0.00024  Score=54.12  Aligned_cols=74  Identities=14%  Similarity=0.200  Sum_probs=55.3

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCccE
Q 022103           31 TIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDI  110 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id~  110 (302)
                      |.++|.|+ |-+|+.+|+.|.+.|++|++++.++++.+..    ...+  ...+.+|.++++.+.++-      ..+.|.
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~----~~~~--~~~~~gd~~~~~~l~~a~------i~~a~~   67 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAY----ASYA--THAVIANATEENELLSLG------IRNFEY   67 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHT----TTTC--SEEEECCTTCTTHHHHHT------GGGCSE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHH----HHhC--CcceeeecccchhhhccC------CccccE
Confidence            45778877 6799999999999999999999998776654    3333  356779999998765441      125687


Q ss_pred             EEEcCCC
Q 022103          111 LVNNAGV  117 (302)
Q Consensus       111 lv~~aG~  117 (302)
                      ++...+-
T Consensus        68 vi~~~~~   74 (134)
T d2hmva1          68 VIVAIGA   74 (134)
T ss_dssp             EEECCCS
T ss_pred             EEEEcCc
Confidence            7766654

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.19  E-value=0.0049  Score=47.73  Aligned_cols=111  Identities=16%  Similarity=0.188  Sum_probs=65.5

Q ss_pred             EEEeCCCchHHHHHHHHHHHcCC--EEEEEecChh--hHHHHHHHHhh----CCCceeEEEeeCCCHHHHHHHHHHHHhh
Q 022103           33 AIVTGANKGIGFALVKRLAELGL--TVILTARDVE--RGQRAVESLSE----KGLPVNFFQLDVSDPSSIEAFVSWFKSN  104 (302)
Q Consensus        33 vlItGas~gIG~ala~~l~~~G~--~V~l~~r~~~--~~~~~~~~l~~----~~~~~~~~~~Dlt~~~~~~~~~~~~~~~  104 (302)
                      +.|.||+|.+|..+|..|+.+|.  ++++++++.+  +.+.....+.+    ..........--.+.+.+          
T Consensus         3 V~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d~~~l----------   72 (145)
T d1hyea1           3 VTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENLRII----------   72 (145)
T ss_dssp             EEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCGGGG----------
T ss_pred             EEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcchHHHh----------
Confidence            88999999999999999999984  8999998753  33333333432    122233322211122222          


Q ss_pred             CCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEe
Q 022103          105 FAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNI  164 (302)
Q Consensus       105 ~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~v  164 (302)
                       ...|++|.+||....+  ..+   -.+.+..|..=    .+.+.+.+.+. ....|+.+
T Consensus        73 -~~aDvVVitAG~~~~~--g~s---R~dl~~~Na~i----v~~i~~~i~~~-~~~~iivV  121 (145)
T d1hyea1          73 -DESDVVIITSGVPRKE--GMS---RMDLAKTNAKI----VGKYAKKIAEI-CDTKIFVI  121 (145)
T ss_dssp             -TTCSEEEECCSCCCCT--TCC---HHHHHHHHHHH----HHHHHHHHHHH-CCCEEEEC
T ss_pred             -ccceEEEEecccccCC--CCC---hhhhhhhhHHH----HHHHHHHHhcc-CCCeEEEE
Confidence             3689999999975432  233   33456666544    44444444443 23445544

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.16  E-value=0.0038  Score=49.13  Aligned_cols=115  Identities=17%  Similarity=0.234  Sum_probs=73.5

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCC--EEEEEecChhhHHHHHHHHhhCC----CceeEEEeeCCCHHHHHHHHHHH
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGL--TVILTARDVERGQRAVESLSEKG----LPVNFFQLDVSDPSSIEAFVSWF  101 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~--~V~l~~r~~~~~~~~~~~l~~~~----~~~~~~~~Dlt~~~~~~~~~~~~  101 (302)
                      ++...+.|.|+ |.+|..+|..|+.+|.  ++++++++.++.+..+..+.+..    ........|   .+++       
T Consensus        17 ~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d---~~~~-------   85 (159)
T d2ldxa1          17 LSRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKD---YNVS-------   85 (159)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESS---GGGG-------
T ss_pred             CCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccc---hhhh-------
Confidence            44556788896 9999999999999975  79999999888776666665432    122222223   2221       


Q ss_pred             HhhCCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecC
Q 022103          102 KSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISS  166 (302)
Q Consensus       102 ~~~~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS  166 (302)
                          ..-|++|..||....+-  .+..   +.++.|    ..+.+.+.+.+.+....+.++++|.
T Consensus        86 ----~~adivvitag~~~~~~--~~R~---dll~~N----~~i~~~i~~~i~~~~p~~ivivvtN  137 (159)
T d2ldxa1          86 ----ANSKLVIITAGARMVSG--QTRL---DLLQRN----VAIMKAIVPGVIQNSPDCKIIVVTN  137 (159)
T ss_dssp             ----TTEEEEEECCSCCCCTT--TCSS---CTTHHH----HHHHHHHTTTHHHHSTTCEEEECSS
T ss_pred             ----ccccEEEEecccccCCC--CCHH---HHHHHH----HHHHHHHHHHHhccCCCeEEEEeCC
Confidence                36899999999864421  1211   123333    3456777777776645666777664

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=97.14  E-value=0.0075  Score=48.13  Aligned_cols=117  Identities=15%  Similarity=0.093  Sum_probs=67.1

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcCC-------EEEEEecCh--hhHHHHHHHHhhCCCc-eeEEEeeCCCHHHHHHHH
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELGL-------TVILTARDV--ERGQRAVESLSEKGLP-VNFFQLDVSDPSSIEAFV   98 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G~-------~V~l~~r~~--~~~~~~~~~l~~~~~~-~~~~~~Dlt~~~~~~~~~   98 (302)
                      +...|.||||+|.||..++..|++.+.       .+.+++...  +.++...-++...... ...... -++..      
T Consensus        23 ~~~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~~~~~~~-~~~~~------   95 (175)
T d7mdha1          23 KLVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSI-GIDPY------   95 (175)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEE-ESCHH------
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccccccccCccc-cccch------
Confidence            345799999999999999999998532       455555544  3445555555543222 221111 12221      


Q ss_pred             HHHHhhCCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhc-CCCCCcEEEec
Q 022103           99 SWFKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRR-SPSKSRILNIS  165 (302)
Q Consensus        99 ~~~~~~~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~-~~~~~~iv~vs  165 (302)
                          +.+...|++|..+|....  ...+.   .+.+..|..    +.+.+.+.+.+ .+....|+.+|
T Consensus        96 ----~~~~~aDvVvi~ag~~rk--pg~tR---~Dll~~N~~----I~k~~~~~i~~~a~~~~~vlvv~  150 (175)
T d7mdha1          96 ----EVFEDVDWALLIGAKPRG--PGMER---AALLDINGQ----IFADQGKALNAVASKNVKVLVVG  150 (175)
T ss_dssp             ----HHTTTCSEEEECCCCCCC--TTCCH---HHHHHHHHH----HHHHHHHHHHHHSCTTCEEEECS
T ss_pred             ----hhccCCceEEEeeccCCC--CCCcH---HHHHHHHHH----HHHHHHHHHHhhCCCCcEEEEec
Confidence                122478999999998643  22343   445666643    45555555555 22235555554

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=97.13  E-value=0.00098  Score=52.66  Aligned_cols=81  Identities=16%  Similarity=0.176  Sum_probs=56.0

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGL-TVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      -++.+++|.|++|++|..++..+...|+ +|+++++++++++... ++   |.+   +..|.++.+..++..+...  .+
T Consensus        26 ~~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~-~~---Ga~---~~i~~~~~~~~~~~~~~~~--~~   96 (170)
T d1jvba2          26 DPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAK-RA---GAD---YVINASMQDPLAEIRRITE--SK   96 (170)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHH-HH---TCS---EEEETTTSCHHHHHHHHTT--TS
T ss_pred             CCCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHH-Hc---CCc---eeeccCCcCHHHHHHHHhh--cc
Confidence            3578999999999999999999998885 8889998887655443 33   323   2234455444444433322  24


Q ss_pred             CccEEEEcCCC
Q 022103          107 ALDILVNNAGV  117 (302)
Q Consensus       107 ~id~lv~~aG~  117 (302)
                      .+|+++.++|.
T Consensus        97 ~~d~vid~~g~  107 (170)
T d1jvba2          97 GVDAVIDLNNS  107 (170)
T ss_dssp             CEEEEEESCCC
T ss_pred             cchhhhccccc
Confidence            69999999886

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=97.10  E-value=0.0034  Score=48.91  Aligned_cols=119  Identities=11%  Similarity=0.085  Sum_probs=71.6

Q ss_pred             CcEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHhhC----CCceeEEEeeCCCHHHHHHHHHHHHhh
Q 022103           30 ETIAIVTGANKGIGFALVKRLAELGL-TVILTARDVERGQRAVESLSEK----GLPVNFFQLDVSDPSSIEAFVSWFKSN  104 (302)
Q Consensus        30 ~k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~----~~~~~~~~~Dlt~~~~~~~~~~~~~~~  104 (302)
                      +..+.|.|+ |.+|..+|..|..++. ++++++++.++.+..+..+++.    +.+..+...+  +.+++          
T Consensus         3 ~~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~--~~~~~----------   69 (150)
T d1t2da1           3 KAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSN--TYDDL----------   69 (150)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEEC--CGGGG----------
T ss_pred             CCeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEecc--ccccc----------
Confidence            346778896 8999999998888874 7999999887776665555432    2233333322  22222          


Q ss_pred             CCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecC
Q 022103          105 FAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISS  166 (302)
Q Consensus       105 ~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS  166 (302)
                       ...|+++.++|....+-.......-.+.+..|.    -+.+.+.+.+.+....+.++++|-
T Consensus        70 -~~advvvitag~~~~~g~~~~~~~R~~l~~~N~----~iv~~i~~~i~~~~p~aivivvtN  126 (150)
T d1t2da1          70 -AGADVVIVTAGFTKAPGKSDKEWNRDDLLPLNN----KIMIEIGGHIKKNCPNAFIIVVTN  126 (150)
T ss_dssp             -TTCSEEEECCSCSSCTTCCSTTCCGGGGHHHHH----HHHHHHHHHHHHHCTTSEEEECSS
T ss_pred             -CCCcEEEEecccccCCCCCccccchhHHHHHHH----HHHHHHHHHHHhcCCCeEEEEecC
Confidence             368999999997643211111112334455554    455555555555434566666653

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=97.08  E-value=0.0013  Score=54.78  Aligned_cols=79  Identities=24%  Similarity=0.217  Sum_probs=55.5

Q ss_pred             cccCcEEEEeCC----------------CchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCC
Q 022103           27 WSKETIAIVTGA----------------NKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSD   90 (302)
Q Consensus        27 ~~~~k~vlItGa----------------s~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~   90 (302)
                      +++|++||||+|                ||-.|.++|+.+..+|++|.++.-....         .....+..  ..+..
T Consensus         3 dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~---------~~p~~~~~--~~~~t   71 (223)
T d1u7za_           3 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSL---------PTPPFVKR--VDVMT   71 (223)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCC---------CCCTTEEE--EECCS
T ss_pred             ccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhccccc---------Cccccccc--ceehh
Confidence            688999999987                6889999999999999999988664421         00112333  34455


Q ss_pred             HHHHHHHHHHHHhhCCCccEEEEcCCCCC
Q 022103           91 PSSIEAFVSWFKSNFAALDILVNNAGVSF  119 (302)
Q Consensus        91 ~~~~~~~~~~~~~~~g~id~lv~~aG~~~  119 (302)
                      .+++...+..   .+...|++|++|.++.
T Consensus        72 ~~~m~~~~~~---~~~~~D~~i~aAAvsD   97 (223)
T d1u7za_          72 ALEMEAAVNA---SVQQQNIFIGCAAVAD   97 (223)
T ss_dssp             HHHHHHHHHH---HGGGCSEEEECCBCCS
T ss_pred             hHHHHHHHHh---hhccceeEeeeechhh
Confidence            5555544443   3346799999999874

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.06  E-value=0.0034  Score=48.55  Aligned_cols=115  Identities=23%  Similarity=0.184  Sum_probs=67.9

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCC--EEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCcc
Q 022103           32 IAIVTGANKGIGFALVKRLAELGL--TVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALD  109 (302)
Q Consensus        32 ~vlItGas~gIG~ala~~l~~~G~--~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id  109 (302)
                      .+.|+||+|.+|.++|..|+.+|.  ++++++.+..+.+  +..+.+.. .......-+. ..+..+.+       ...|
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~--a~Dl~~~~-~~~~~~~~~~-~~~~~~~~-------~~aD   70 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGV--AADLSHIE-TRATVKGYLG-PEQLPDCL-------KGCD   70 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHH--HHHHTTSS-SSCEEEEEES-GGGHHHHH-------TTCS
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchh--hHHHhhhh-hhcCCCeEEc-CCChHHHh-------CCCC
Confidence            478999999999999999999885  6999998764432  23333322 1111222222 22222222       2689


Q ss_pred             EEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecC
Q 022103          110 ILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISS  166 (302)
Q Consensus       110 ~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS  166 (302)
                      ++|..+|....+  ..+   ..+.++.|..-.-    .+.+.+.+....+.|+.+|.
T Consensus        71 ivVitag~~~~~--g~s---R~~ll~~N~~i~~----~i~~~i~~~~p~~iiivvtN  118 (144)
T d1mlda1          71 VVVIPAGVPRKP--GMT---RDDLFNTNATIVA----TLTAACAQHCPDAMICIISN  118 (144)
T ss_dssp             EEEECCSCCCCT--TCC---GGGGHHHHHHHHH----HHHHHHHHHCTTSEEEECSS
T ss_pred             EEEECCCcCCCC--CCC---cchHHHHHHHHHH----HHHHHHHhcCCCeEEEEecC
Confidence            999999975432  123   2334666655444    44444444434566777664

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=97.04  E-value=0.0014  Score=50.76  Aligned_cols=111  Identities=15%  Similarity=0.128  Sum_probs=63.7

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCC--EEEEEecChhhHHHHHHHHhhCC---CceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           32 IAIVTGANKGIGFALVKRLAELGL--TVILTARDVERGQRAVESLSEKG---LPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        32 ~vlItGas~gIG~ala~~l~~~G~--~V~l~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      .+.|.|+ |.+|..+|..|+.+|.  ++++++++.++.+..+..+.+..   ........   +.++           ..
T Consensus         3 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~---~~~~-----------~~   67 (142)
T d1y6ja1           3 KVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAG---DYSD-----------VK   67 (142)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----CGGG-----------GT
T ss_pred             eEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeC---cHHH-----------hC
Confidence            4566687 9999999999999975  79999999887665555565421   12222221   2222           23


Q ss_pred             CccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecC
Q 022103          107 ALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISS  166 (302)
Q Consensus       107 ~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS  166 (302)
                      .-|++|.+||....+     -+...+.+..|..    +.+.+.+.+.+....+.++++|-
T Consensus        68 ~adivvitag~~~~~-----~~~r~~l~~~N~~----i~~~i~~~i~~~~p~ai~ivvtN  118 (142)
T d1y6ja1          68 DCDVIVVTAGANRKP-----GETRLDLAKKNVM----IAKEVTQNIMKYYNHGVILVVSN  118 (142)
T ss_dssp             TCSEEEECCCC-----------CHHHHHHHHHH----HHHHHHHHHHHHCCSCEEEECSS
T ss_pred             CCceEEEecccccCc-----CcchhHHhhHHHH----HHHHHHHHhhccCCCceEEEecC
Confidence            679999999975432     1223445566654    45555555555434455666553

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=97.04  E-value=0.0042  Score=47.86  Aligned_cols=112  Identities=19%  Similarity=0.163  Sum_probs=66.6

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHhhC----CCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           31 TIAIVTGANKGIGFALVKRLAELGL-TVILTARDVERGQRAVESLSEK----GLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~----~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      |.+.|.|+ |.+|.++|..|+.++. ++++++.+.++.+.....+.+.    .....+...  .|.+++           
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~--~d~~~~-----------   67 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGT--NNYADT-----------   67 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SCGGGG-----------
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEec--CcHHHh-----------
Confidence            45677786 9999999999999885 8999999887766555544332    112222221  122222           


Q ss_pred             CCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEec
Q 022103          106 AALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNIS  165 (302)
Q Consensus       106 g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vs  165 (302)
                      ..-|++|.+||....+     -+...+.+..|.    .+.+.+.+.+.+....+.++++|
T Consensus        68 ~~advvvitag~~~~~-----~~~r~dl~~~N~----~i~~~i~~~i~k~~p~aivivvt  118 (142)
T d1uxja1          68 ANSDVIVVTSGAPRKP-----GMSREDLIKVNA----DITRACISQAAPLSPNAVIIMVN  118 (142)
T ss_dssp             TTCSEEEECCSCC--------------CHHHHH----HHHHHHHHHHGGGCTTCEEEECS
T ss_pred             cCCCEEEEeeeccCCc-----CcchhHHHhHHH----HHHHHHHHHHhccCCCceEEEeC
Confidence            2679999999976432     122233445554    46677777777653456566654

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=97.03  E-value=0.0053  Score=47.92  Aligned_cols=121  Identities=14%  Similarity=0.081  Sum_probs=69.7

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHhhC----CCceeEEEeeCCCHHHHHHHHHHHHh
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELGL-TVILTARDVERGQRAVESLSEK----GLPVNFFQLDVSDPSSIEAFVSWFKS  103 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~----~~~~~~~~~Dlt~~~~~~~~~~~~~~  103 (302)
                      +.+.+.|.|+ |.+|..+|..|+..+. ++++++.+.++++..+..+.+.    +.... ...+-..++.+         
T Consensus         6 k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~-~~~~~~~~~~~---------   74 (154)
T d1pzga1           6 RRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVS-VRAEYSYEAAL---------   74 (154)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCC-EEEECSHHHHH---------
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeE-EeccCchhhhh---------
Confidence            4577888897 8999999999998885 8999999887766665555432    11111 11111112222         


Q ss_pred             hCCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecC
Q 022103          104 NFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISS  166 (302)
Q Consensus       104 ~~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS  166 (302)
                        ...|+++.++|....+-.......-.+.+..|..    +++.+.+.+.+....+-++++|.
T Consensus        75 --~~adiVvitag~~~~~g~~~~~~tR~~l~~~n~~----iv~~i~~~i~~~~p~aiviivsN  131 (154)
T d1pzga1          75 --TGADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSK----IIREIGQNIKKYCPKTFIIVVTN  131 (154)
T ss_dssp             --TTCSEEEECCSCSSCTTCCGGGCCGGGGHHHHHH----HHHHHHHHHHHHCTTCEEEECCS
T ss_pred             --cCCCeEEEecccccCCCCCCcccchhhhhhhhHH----HHHHHHHHHHhcCCCcEEEEeCC
Confidence              2679999999976432111111122333444444    44445554544434456666654

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=96.98  E-value=0.0067  Score=46.91  Aligned_cols=114  Identities=19%  Similarity=0.114  Sum_probs=67.2

Q ss_pred             EEEEeCCCchHHHHHHHHHHHc-C--CEEEEEecChhhHHHHHHHHhhCCCceeEE-EeeCCCHHHHHHHHHHHHhhCCC
Q 022103           32 IAIVTGANKGIGFALVKRLAEL-G--LTVILTARDVERGQRAVESLSEKGLPVNFF-QLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        32 ~vlItGas~gIG~ala~~l~~~-G--~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~-~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      .+.|+|++|.+|.++|..|+.+ +  .++++++..+ ..+..+..+.+........ ...-.+.+.+           ..
T Consensus         2 KV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~-~~~g~a~Dl~h~~~~~~~~~~~~~~~~~~~-----------~~   69 (145)
T d2cmda1           2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTAVKIKGFSGEDATPAL-----------EG   69 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSST-THHHHHHHHHTSCSSCEEEEECSSCCHHHH-----------TT
T ss_pred             EEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccc-cchhHHHHHHCCccccCCcEEEcCCCcccc-----------CC
Confidence            4789999999999999988754 4  6899999864 4444444555432222111 1222333333           26


Q ss_pred             ccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecC
Q 022103          108 LDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISS  166 (302)
Q Consensus       108 id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS  166 (302)
                      -|++|.++|....+  ..+   -.+.+..|..-    .+.+.+.+.+....+.|+++|.
T Consensus        70 aDvvvitaG~~~k~--g~~---R~dl~~~N~~i----~~~v~~~i~~~~p~aivivvtN  119 (145)
T d2cmda1          70 ADVVLISAGVRRKP--GMD---RSDLFNVNAGI----VKNLVQQVAKTCPKACIGIITN  119 (145)
T ss_dssp             CSEEEECCSCCCCT--TCC---GGGGHHHHHHH----HHHHHHHHHHHCTTSEEEECSS
T ss_pred             CCEEEECCCccCCC--Ccc---hhhHHHHHHHH----HHHHHHHHHhhCCCcEEEEccC
Confidence            79999999986432  122   33456666444    4444444444434456666654

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.97  E-value=0.00087  Score=54.11  Aligned_cols=79  Identities=15%  Similarity=0.109  Sum_probs=53.7

Q ss_pred             CcEEEEeCCCchHHHHHHHHHHHcCCE-EEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCc
Q 022103           30 ETIAIVTGANKGIGFALVKRLAELGLT-VILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAAL  108 (302)
Q Consensus        30 ~k~vlItGas~gIG~ala~~l~~~G~~-V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~i  108 (302)
                      +.+|||+||+||+|...++..-..|++ |+.++++.++.....+++..   .   ...|..+++ +.+.++++..  ..+
T Consensus        31 ~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~ga---d---~vi~~~~~~-~~~~~~~~~~--~Gv  101 (187)
T d1vj1a2          31 NQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGF---D---AAVNYKTGN-VAEQLREACP--GGV  101 (187)
T ss_dssp             CCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCC---S---EEEETTSSC-HHHHHHHHCT--TCE
T ss_pred             CCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccc---e---EEeeccchh-HHHHHHHHhc--cCc
Confidence            379999999999999999888778986 55566777676666665532   2   223444443 3334444432  369


Q ss_pred             cEEEEcCCC
Q 022103          109 DILVNNAGV  117 (302)
Q Consensus       109 d~lv~~aG~  117 (302)
                      |+++.+.|.
T Consensus       102 Dvv~D~vGg  110 (187)
T d1vj1a2         102 DVYFDNVGG  110 (187)
T ss_dssp             EEEEESSCH
T ss_pred             eEEEecCCc
Confidence            999999884

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.93  E-value=0.0059  Score=46.84  Aligned_cols=109  Identities=16%  Similarity=0.180  Sum_probs=68.2

Q ss_pred             EEEeCCCchHHHHHHHHHHHcC--CEEEEEecChhhHHHHHHHHhhC---CCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           33 AIVTGANKGIGFALVKRLAELG--LTVILTARDVERGQRAVESLSEK---GLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        33 vlItGas~gIG~ala~~l~~~G--~~V~l~~r~~~~~~~~~~~l~~~---~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      +.|.|+ |.+|..+|..|+.++  .++++++.+.++++.....+...   ..+......|   .+++           ..
T Consensus         3 I~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~---~~~~-----------~~   67 (140)
T d1a5za1           3 IGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGD---YADL-----------KG   67 (140)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECC---GGGG-----------TT
T ss_pred             EEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCc---HHHh-----------cC
Confidence            566786 889999999999987  47999999988776555554432   2233333332   3222           36


Q ss_pred             ccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEec
Q 022103          108 LDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNIS  165 (302)
Q Consensus       108 id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vs  165 (302)
                      .|++|.+||....+  ..+.   .+.+..|.    .+.+.+.+.+.+....+.++++|
T Consensus        68 adivvitag~~~~~--g~~r---~dl~~~N~----~I~~~i~~~i~~~~p~aivivvt  116 (140)
T d1a5za1          68 SDVVIVAAGVPQKP--GETR---LQLLGRNA----RVMKEIARNVSKYAPDSIVIVVT  116 (140)
T ss_dssp             CSEEEECCCCCCCS--SCCH---HHHHHHHH----HHHHHHHHHHHHHCTTCEEEECS
T ss_pred             CCEEEEecccccCC--Ccch---hhhhcccc----chHHHHHHHHHhcCCCcEEEEeC
Confidence            79999999986432  1232   33444453    35566666666653456566655

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=96.89  E-value=0.0021  Score=50.64  Aligned_cols=76  Identities=14%  Similarity=0.279  Sum_probs=54.7

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      -+|.+|+|.|+ |+||...++.+...|+++++++++.++.+ .++++..   ..   ..|..+.+...       .....
T Consensus        29 ~~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~-~a~~lGa---d~---~i~~~~~~~~~-------~~~~~   93 (168)
T d1uufa2          29 GPGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKRE-AAKALGA---DE---VVNSRNADEMA-------AHLKS   93 (168)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHH-HHHHHTC---SE---EEETTCHHHHH-------TTTTC
T ss_pred             CCCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHHH-HHhccCC---cE---EEECchhhHHH-------HhcCC
Confidence            45889999986 89999999888888999999999988765 3455532   22   24555554332       22247


Q ss_pred             ccEEEEcCCCC
Q 022103          108 LDILVNNAGVS  118 (302)
Q Consensus       108 id~lv~~aG~~  118 (302)
                      +|+++.++|..
T Consensus        94 ~D~vid~~g~~  104 (168)
T d1uufa2          94 FDFILNTVAAP  104 (168)
T ss_dssp             EEEEEECCSSC
T ss_pred             Cceeeeeeecc
Confidence            99999999863

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=96.88  E-value=0.0096  Score=45.86  Aligned_cols=111  Identities=18%  Similarity=0.220  Sum_probs=68.0

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCC--EEEEEecChhhHHHHHHHHhhC---CCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           32 IAIVTGANKGIGFALVKRLAELGL--TVILTARDVERGQRAVESLSEK---GLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        32 ~vlItGas~gIG~ala~~l~~~G~--~V~l~~r~~~~~~~~~~~l~~~---~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      .+.|.|+ |.+|.++|..|+.+|.  +++++++++++.+..+..+++.   -....+...  .+.+++           .
T Consensus         3 Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~--~~~~~~-----------~   68 (143)
T d1llda1           3 KLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGS--DDPEIC-----------R   68 (143)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEE--SCGGGG-----------T
T ss_pred             EEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecC--CCHHHh-----------h
Confidence            3666686 9999999999999985  7999999987766555545442   112233222  222222           2


Q ss_pred             CccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEec
Q 022103          107 ALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNIS  165 (302)
Q Consensus       107 ~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vs  165 (302)
                      .-|++|.+||....+  ..+.   .+.+..|.    .+.+.+.+.+.+....+.++++|
T Consensus        69 daDvVVitaG~~~~~--g~~R---~dl~~~N~----~i~~~i~~~i~~~~p~ai~ivvt  118 (143)
T d1llda1          69 DADMVVITAGPRQKP--GQSR---LELVGATV----NILKAIMPNLVKVAPNAIYMLIT  118 (143)
T ss_dssp             TCSEEEECCCCCCCT--TCCH---HHHHHHHH----HHHHHHHHHHHHHCTTSEEEECC
T ss_pred             CCcEEEEecccccCC--CCch---hhhhhhhH----HHHHHHHHHHHhhCCCeEEEEeC
Confidence            579999999986432  2333   34555555    34555555555543445555555

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=96.87  E-value=0.0033  Score=48.62  Aligned_cols=76  Identities=14%  Similarity=0.118  Sum_probs=59.7

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCccEE
Q 022103           32 IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDIL  111 (302)
Q Consensus        32 ~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id~l  111 (302)
                      .++|.|. |-+|+.+++.|.++|.+|++++.++++.....++....  .+.++.+|.++++.++++--      .+.+.+
T Consensus         5 HiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~~--~~~vi~Gd~~d~~~L~~a~i------~~a~~v   75 (153)
T d1id1a_           5 HFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGD--NADVIPGDSNDSSVLKKAGI------DRCRAI   75 (153)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCT--TCEEEESCTTSHHHHHHHTT------TTCSEE
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhcC--CcEEEEccCcchHHHHHhcc------ccCCEE
Confidence            5778887 67999999999999999999999988776666666543  57889999999986654322      367888


Q ss_pred             EEcCC
Q 022103          112 VNNAG  116 (302)
Q Consensus       112 v~~aG  116 (302)
                      |.+.+
T Consensus        76 i~~~~   80 (153)
T d1id1a_          76 LALSD   80 (153)
T ss_dssp             EECSS
T ss_pred             EEccc
Confidence            77654

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=96.85  E-value=0.0011  Score=52.94  Aligned_cols=80  Identities=11%  Similarity=0.052  Sum_probs=53.5

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGL-TVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      -+|.+|+|.|+ |+||...++.+...|+ +|++++++.++++.+ +++.   ..   ...|..+.+..+++.+.. . ..
T Consensus        26 ~~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a-~~lG---a~---~~i~~~~~~~~~~v~~~t-~-g~   95 (174)
T d1jqba2          26 EMGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAA-KFYG---AT---DILNYKNGHIEDQVMKLT-N-GK   95 (174)
T ss_dssp             CTTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHH-HHHT---CS---EEECGGGSCHHHHHHHHT-T-TS
T ss_pred             CCCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHH-HhhC---cc---ccccccchhHHHHHHHHh-h-cc
Confidence            35788999986 8999999988888897 699999998776554 3343   22   123444433333333322 1 13


Q ss_pred             CccEEEEcCCC
Q 022103          107 ALDILVNNAGV  117 (302)
Q Consensus       107 ~id~lv~~aG~  117 (302)
                      .+|++|.++|.
T Consensus        96 G~D~vid~~g~  106 (174)
T d1jqba2          96 GVDRVIMAGGG  106 (174)
T ss_dssp             CEEEEEECSSC
T ss_pred             CcceEEEccCC
Confidence            59999999996

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.79  E-value=0.0039  Score=49.04  Aligned_cols=77  Identities=16%  Similarity=0.173  Sum_probs=52.3

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      -+|.+++|.|+ |++|...++.+...|++|+++++++++++.+ +++   |....+   |..+..+.   .   +...+.
T Consensus        26 ~~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a-~~l---Ga~~~i---~~~~~~~~---~---~~~~~~   91 (168)
T d1piwa2          26 GPGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDA-MKM---GADHYI---ATLEEGDW---G---EKYFDT   91 (168)
T ss_dssp             STTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHH-HHH---TCSEEE---EGGGTSCH---H---HHSCSC
T ss_pred             CCCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHh-hcc---CCcEEe---eccchHHH---H---Hhhhcc
Confidence            36889999987 8999998887777899999999998887654 344   333222   22222111   1   122357


Q ss_pred             ccEEEEcCCCC
Q 022103          108 LDILVNNAGVS  118 (302)
Q Consensus       108 id~lv~~aG~~  118 (302)
                      +|.++.+.|..
T Consensus        92 ~d~vi~~~~~~  102 (168)
T d1piwa2          92 FDLIVVCASSL  102 (168)
T ss_dssp             EEEEEECCSCS
T ss_pred             cceEEEEecCC
Confidence            89999988764

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=96.76  E-value=0.0027  Score=50.35  Aligned_cols=82  Identities=16%  Similarity=0.231  Sum_probs=55.1

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGL-TVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      -+|.+|+|.|+ ||+|...+..+...|+ +|+++++++++++...+ +   +....+...|-  .+.+.+.......  +
T Consensus        27 k~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~-~---Ga~~~i~~~~~--~~~~~~~~~~~~~--~   97 (176)
T d2jhfa2          27 TQGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKE-V---GATECVNPQDY--KKPIQEVLTEMSN--G   97 (176)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-T---TCSEEECGGGC--SSCHHHHHHHHTT--S
T ss_pred             CCCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHH-h---CCeeEEecCCc--hhHHHHHHHHHhc--C
Confidence            35789999999 6899999999999985 89999999988664433 2   32222211221  2334444444433  4


Q ss_pred             CccEEEEcCCCC
Q 022103          107 ALDILVNNAGVS  118 (302)
Q Consensus       107 ~id~lv~~aG~~  118 (302)
                      .+|++|-+.|..
T Consensus        98 G~D~vid~~G~~  109 (176)
T d2jhfa2          98 GVDFSFEVIGRL  109 (176)
T ss_dssp             CBSEEEECSCCH
T ss_pred             CCCEEEecCCch
Confidence            799999999873

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.69  E-value=0.0046  Score=48.33  Aligned_cols=78  Identities=18%  Similarity=0.225  Sum_probs=50.9

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      -+|.+|+|.|+ |++|...+..+...|++|+++++++++++.. +++   |....   .|.++.+..+.+.+..    +.
T Consensus        26 ~~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a-~~~---Ga~~~---i~~~~~~~~~~~~~~~----~g   93 (166)
T d1llua2          26 RPGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLELA-RKL---GASLT---VNARQEDPVEAIQRDI----GG   93 (166)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHT---TCSEE---EETTTSCHHHHHHHHH----SS
T ss_pred             CCCCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHhh-hcc---Ccccc---ccccchhHHHHHHHhh----cC
Confidence            35789999886 9999999988888899999999998887644 333   33322   3555554444333322    34


Q ss_pred             ccEEEEcCCC
Q 022103          108 LDILVNNAGV  117 (302)
Q Consensus       108 id~lv~~aG~  117 (302)
                      .+.++.+++.
T Consensus        94 ~~~~i~~~~~  103 (166)
T d1llua2          94 AHGVLVTAVS  103 (166)
T ss_dssp             EEEEEECCSC
T ss_pred             Cccccccccc
Confidence            5555555443

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=96.68  E-value=0.00087  Score=53.38  Aligned_cols=101  Identities=19%  Similarity=0.159  Sum_probs=64.9

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHh--hCC
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKS--NFA  106 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~--~~g  106 (302)
                      ++.+|||+||+||+|...++.....|++|+.+.++.++.+.+.+ +   |.+.....      ++   ...+...  ..+
T Consensus        23 ~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~~~-l---Gad~vi~~------~~---~~~~~~~~~~~~   89 (167)
T d1tt7a2          23 EKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQ-L---GASEVISR------ED---VYDGTLKALSKQ   89 (167)
T ss_dssp             GGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHH-H---TCSEEEEH------HH---HCSSCCCSSCCC
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHHHh-h---cccceEec------cc---hhchhhhcccCC
Confidence            46689999999999999998777779999999999887665433 3   33332211      11   1111111  124


Q ss_pred             CccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcc
Q 022103          107 ALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGT  170 (302)
Q Consensus       107 ~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~  170 (302)
                      .+|+++.+.|..          .+.               ..+..++.   .|++|.++...+.
T Consensus        90 gvd~vid~vgg~----------~~~---------------~~~~~l~~---~G~iv~~G~~~g~  125 (167)
T d1tt7a2          90 QWQGAVDPVGGK----------QLA---------------SLLSKIQY---GGSVAVSGLTGGG  125 (167)
T ss_dssp             CEEEEEESCCTH----------HHH---------------HHHTTEEE---EEEEEECCCSSCS
T ss_pred             CceEEEecCcHH----------HHH---------------HHHHHhcc---CceEEEeeccCCC
Confidence            689999888762          122               22333443   5899999877664

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=96.68  E-value=0.0026  Score=50.46  Aligned_cols=79  Identities=13%  Similarity=0.174  Sum_probs=52.3

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEE-EEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTV-ILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V-~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      -+|.+|+|.|+ |+||...+..+...|+++ +++++++++++.+ +++.   .. .+  .|..+.+ +.+.+.++..  +
T Consensus        27 ~~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a-~~~G---a~-~~--i~~~~~~-~~~~i~~~t~--g   95 (174)
T d1f8fa2          27 TPASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELA-KQLG---AT-HV--INSKTQD-PVAAIKEITD--G   95 (174)
T ss_dssp             CTTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH-HHHT---CS-EE--EETTTSC-HHHHHHHHTT--S
T ss_pred             CCCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHH-HHcC---Ce-EE--EeCCCcC-HHHHHHHHcC--C
Confidence            46889999997 899999999888889865 5567777665554 3443   22 22  3444433 3333333322  4


Q ss_pred             CccEEEEcCCC
Q 022103          107 ALDILVNNAGV  117 (302)
Q Consensus       107 ~id~lv~~aG~  117 (302)
                      .+|++|.++|.
T Consensus        96 g~D~vid~~G~  106 (174)
T d1f8fa2          96 GVNFALESTGS  106 (174)
T ss_dssp             CEEEEEECSCC
T ss_pred             CCcEEEEcCCc
Confidence            79999999986

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=96.64  E-value=0.0015  Score=52.36  Aligned_cols=45  Identities=29%  Similarity=0.401  Sum_probs=38.1

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHH
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESL   74 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l   74 (302)
                      ++.+++|+||+||+|...++.....|++|+.+.++.++.+.+ +++
T Consensus        31 ~~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~-~~l   75 (177)
T d1o89a2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYL-KSL   75 (177)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH-HHH
T ss_pred             CCCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHH-Hhh
Confidence            445899999999999999988888899999999999886544 444

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=96.60  E-value=0.01  Score=46.17  Aligned_cols=81  Identities=21%  Similarity=0.163  Sum_probs=54.0

Q ss_pred             EEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhh----------CCCceeEEEeeCCCHHHHHHHHHHHH
Q 022103           33 AIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSE----------KGLPVNFFQLDVSDPSSIEAFVSWFK  102 (302)
Q Consensus        33 vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~----------~~~~~~~~~~Dlt~~~~~~~~~~~~~  102 (302)
                      +.|.|. |-+|..+|+.|.++|++|++.+|+.+..+...+.-..          ...++.++..   ..+.+.++++++.
T Consensus         3 I~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~DiIilav---p~~~~~~vl~~l~   78 (165)
T d2f1ka2           3 IGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLLQTAKIIFLCT---PIQLILPTLEKLI   78 (165)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGGGGTTCSEEEECS---CHHHHHHHHHHHG
T ss_pred             EEEEee-cHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHhhccceeeeecccccccccccccC---cHhhhhhhhhhhh
Confidence            566666 8899999999999999999999998776654442110          0123333322   3567888888887


Q ss_pred             hhCCCccEEEEcCCC
Q 022103          103 SNFAALDILVNNAGV  117 (302)
Q Consensus       103 ~~~g~id~lv~~aG~  117 (302)
                      ..+.+=.+++..++.
T Consensus        79 ~~l~~~~iv~~~~s~   93 (165)
T d2f1ka2          79 PHLSPTAIVTDVASV   93 (165)
T ss_dssp             GGSCTTCEEEECCSC
T ss_pred             hhcccccceeecccc
Confidence            765554555555443

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=96.54  E-value=0.011  Score=46.46  Aligned_cols=42  Identities=24%  Similarity=0.189  Sum_probs=37.1

Q ss_pred             CcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHH
Q 022103           30 ETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVE   72 (302)
Q Consensus        30 ~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~   72 (302)
                      .|++.|.|+ |.+|.++|..|+++|++|.+++|++++.+...+
T Consensus         1 sk~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~   42 (184)
T d1bg6a2           1 SKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQD   42 (184)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             CCEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence            378999999 789999999999999999999999888766554

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.50  E-value=0.0067  Score=48.21  Aligned_cols=80  Identities=15%  Similarity=0.227  Sum_probs=54.4

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHH-HHHHHHHHHhhC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGL-TVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSS-IEAFVSWFKSNF  105 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~-~~~~~~~~~~~~  105 (302)
                      -+|.+|+|.|+ ||+|...+..+...|+ +|++++++.++++.+.+ +   |....+   |..+.+. .+...+...  .
T Consensus        28 ~~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~-~---GA~~~i---n~~~~~~~~~~~~~~~~--g   97 (176)
T d1d1ta2          28 KPGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMA-V---GATECI---SPKDSTKPISEVLSEMT--G   97 (176)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-H---TCSEEE---CGGGCSSCHHHHHHHHH--T
T ss_pred             CCCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHHHHh-c---CCcEEE---CccccchHHHHHHHHhc--c
Confidence            45889999987 8999999999999995 89999999998774433 3   333222   2222221 222233222  2


Q ss_pred             CCccEEEEcCCC
Q 022103          106 AALDILVNNAGV  117 (302)
Q Consensus       106 g~id~lv~~aG~  117 (302)
                      ..+|+++.+.|.
T Consensus        98 ~G~d~vi~~~g~  109 (176)
T d1d1ta2          98 NNVGYTFEVIGH  109 (176)
T ss_dssp             SCCCEEEECSCC
T ss_pred             ccceEEEEeCCc
Confidence            469999999987

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=96.50  E-value=0.0058  Score=47.07  Aligned_cols=84  Identities=12%  Similarity=0.092  Sum_probs=55.2

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      +..-+++.|.||.|-+|..+|+.|.++|++|.+.+|+.....+...    .+..+.+...   ....+...+.++.....
T Consensus         6 ~~~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~~~~~----~~~~~v~~~~---~~~~~~~v~~~~~~~~~   78 (152)
T d2pv7a2           6 NSDIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVAESIL----ANADVVIVSV---PINLTLETIERLKPYLT   78 (152)
T ss_dssp             CTTCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGHHHHH----TTCSEEEECS---CGGGHHHHHHHHGGGCC
T ss_pred             CCCCCeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccccccchhh----hhcccccccc---chhhheeeeeccccccc
Confidence            3445789999999999999999999999999999998765443221    1234443333   34455566666665543


Q ss_pred             CccEEEEcCCC
Q 022103          107 ALDILVNNAGV  117 (302)
Q Consensus       107 ~id~lv~~aG~  117 (302)
                      .=.+++..+..
T Consensus        79 ~~~iiiD~~Sv   89 (152)
T d2pv7a2          79 ENMLLADLTSV   89 (152)
T ss_dssp             TTSEEEECCSC
T ss_pred             CCceEEEeccc
Confidence            33345544443

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.48  E-value=0.01  Score=43.44  Aligned_cols=39  Identities=13%  Similarity=0.149  Sum_probs=34.8

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChh
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVE   65 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~   65 (302)
                      .+++||+++|.|+ |.+|..-++.|.+.|++|++++....
T Consensus         8 l~l~~k~vlVvG~-G~va~~ka~~ll~~ga~v~v~~~~~~   46 (113)
T d1pjqa1           8 CQLRDRDCLIVGG-GDVAERKARLLLEAGARLTVNALTFI   46 (113)
T ss_dssp             ECCBTCEEEEECC-SHHHHHHHHHHHHTTBEEEEEESSCC
T ss_pred             EEeCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeccCC
Confidence            4689999999999 55999999999999999999887664

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.45  E-value=0.0043  Score=48.83  Aligned_cols=80  Identities=13%  Similarity=0.179  Sum_probs=52.7

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHhhCCCceeEEEeeCC-CHHHHHHHHHHHHhhC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGL-TVILTARDVERGQRAVESLSEKGLPVNFFQLDVS-DPSSIEAFVSWFKSNF  105 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt-~~~~~~~~~~~~~~~~  105 (302)
                      -+|.+|+|.|+ ||+|...+..+...|+ +|+.+++++++++ .++++..   .- ++  |.. +.+.+.+...+...  
T Consensus        27 ~~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~-~ak~lGa---~~-~i--~~~~~~~~~~~~~~~~~~--   96 (176)
T d2fzwa2          27 EPGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFA-RAKEFGA---TE-CI--NPQDFSKPIQEVLIEMTD--   96 (176)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHH-HHHHHTC---SE-EE--CGGGCSSCHHHHHHHHTT--
T ss_pred             CCCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHH-HHHHhCC---cE-EE--eCCchhhHHHHHHHHHcC--
Confidence            46889999998 5899999999998996 5666777776654 4555532   22 22  222 22334444444432  


Q ss_pred             CCccEEEEcCCC
Q 022103          106 AALDILVNNAGV  117 (302)
Q Consensus       106 g~id~lv~~aG~  117 (302)
                      +.+|+++.++|.
T Consensus        97 ~g~D~vid~~G~  108 (176)
T d2fzwa2          97 GGVDYSFECIGN  108 (176)
T ss_dssp             SCBSEEEECSCC
T ss_pred             CCCcEeeecCCC
Confidence            479999999986

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=96.44  E-value=0.011  Score=46.79  Aligned_cols=86  Identities=14%  Similarity=0.161  Sum_probs=60.9

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhC---------------CCceeEEEeeCCCHHHHH
Q 022103           31 TIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEK---------------GLPVNFFQLDVSDPSSIE   95 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~---------------~~~~~~~~~Dlt~~~~~~   95 (302)
                      +.+-|.|- |-+|..+|+.|+++|++|++.+|++++.++..++-...               -.....+...+.+.+.+.
T Consensus         3 ~nIg~IGl-G~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~ii~~~~~~~~v~   81 (176)
T d2pgda2           3 ADIALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAGQAVD   81 (176)
T ss_dssp             BSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECSCTTHHHH
T ss_pred             CcEEEEeE-hHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhccccccccchhhhhhhhhhhcccceEEEecCchHHHH
Confidence            45777777 77999999999999999999999999888775532110               112244555667777788


Q ss_pred             HHHHHHHhhCCCccEEEEcCCC
Q 022103           96 AFVSWFKSNFAALDILVNNAGV  117 (302)
Q Consensus        96 ~~~~~~~~~~g~id~lv~~aG~  117 (302)
                      .+.+.+......=+++|.+...
T Consensus        82 ~v~~~l~~~~~~g~iiid~sT~  103 (176)
T d2pgda2          82 NFIEKLVPLLDIGDIIIDGGNS  103 (176)
T ss_dssp             HHHHHHHHHCCTTCEEEECSCC
T ss_pred             HHHHHHHhccccCcEEEecCcc
Confidence            8888777665544566666544

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=96.36  E-value=0.0078  Score=47.78  Aligned_cols=81  Identities=15%  Similarity=0.211  Sum_probs=53.6

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGL-TVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      -+|.+|+|.|+ |+||...+..+...|+ +|+++++++++++ .++++   |... ++...-.+ +......+....  +
T Consensus        27 ~~G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~-~a~~~---Ga~~-~i~~~~~~-~~~~~~~~~~~~--~   97 (174)
T d1e3ia2          27 TPGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFP-KAKAL---GATD-CLNPRELD-KPVQDVITELTA--G   97 (174)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHH-HHHHT---TCSE-EECGGGCS-SCHHHHHHHHHT--S
T ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHhCCceeeeeccchHHHH-HHHHh---CCCc-ccCCccch-hhhhhhHhhhhc--C
Confidence            56789999975 9999999999999998 5888888887754 33433   3222 22211111 223333333332  5


Q ss_pred             CccEEEEcCCC
Q 022103          107 ALDILVNNAGV  117 (302)
Q Consensus       107 ~id~lv~~aG~  117 (302)
                      .+|++|-++|.
T Consensus        98 G~d~vie~~G~  108 (174)
T d1e3ia2          98 GVDYSLDCAGT  108 (174)
T ss_dssp             CBSEEEESSCC
T ss_pred             CCcEEEEeccc
Confidence            79999999996

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=96.36  E-value=0.049  Score=41.37  Aligned_cols=110  Identities=20%  Similarity=0.160  Sum_probs=66.6

Q ss_pred             EEEeCCCchHHHHHHHHHHHcC--CEEEEEecChhhHHHHHHHHhhC----CCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           33 AIVTGANKGIGFALVKRLAELG--LTVILTARDVERGQRAVESLSEK----GLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        33 vlItGas~gIG~ala~~l~~~G--~~V~l~~r~~~~~~~~~~~l~~~----~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      +.|+|+ |.+|..++..|+..|  .++++++.+.++++.....+.+.    ..+..+...  .+.+.+           .
T Consensus         3 I~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~--~~~~~~-----------~   68 (142)
T d1guza1           3 ITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--NDYADT-----------A   68 (142)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SCGGGG-----------T
T ss_pred             EEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEec--CCHHHh-----------c
Confidence            667796 899999999999998  48999999987766555444432    223333322  233322           3


Q ss_pred             CccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEec
Q 022103          107 ALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNIS  165 (302)
Q Consensus       107 ~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vs  165 (302)
                      ..|++|.++|....+  ..+   -.+.+..|..    +.+.+.+.+.+....+-++++|
T Consensus        69 dadvvvitag~~~~~--g~~---r~~l~~~N~~----i~~~i~~~i~~~~p~aivivvt  118 (142)
T d1guza1          69 NSDIVIITAGLPRKP--GMT---REDLLMKNAG----IVKEVTDNIMKHSKNPIIIVVS  118 (142)
T ss_dssp             TCSEEEECCSCCCCT--TCC---HHHHHHHHHH----HHHHHHHHHHHHCSSCEEEECC
T ss_pred             CCeEEEEEEecCCCC--CCc---hHHHHHHHHH----HHHHHHHHhhccCCCeEEEEec
Confidence            689999999986432  122   2334555544    3444444444432345555554

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=96.36  E-value=0.042  Score=41.96  Aligned_cols=111  Identities=14%  Similarity=0.065  Sum_probs=68.0

Q ss_pred             EEEeCCCchHHHHHHHHHHHcCC--EEEEEecChhhHHHHHHHHhhC----CCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           33 AIVTGANKGIGFALVKRLAELGL--TVILTARDVERGQRAVESLSEK----GLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        33 vlItGas~gIG~ala~~l~~~G~--~V~l~~r~~~~~~~~~~~l~~~----~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      +.|.|+ |.+|.++|..|+.+|.  ++++++.+.++.+..+..+++.    .........  .|.+++           .
T Consensus         3 I~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~--~d~~~~-----------~   68 (142)
T d1ojua1           3 LGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADYSLL-----------K   68 (142)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SCGGGG-----------T
T ss_pred             EEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccC--CCHHHh-----------c
Confidence            566786 9999999999999884  6999999988766555444431    222233321  122222           3


Q ss_pred             CccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecC
Q 022103          107 ALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISS  166 (302)
Q Consensus       107 ~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS  166 (302)
                      .-|+++..||....+  ..+   ..+.+..|    ..+.+.+.+.+.+....+.++++|-
T Consensus        69 ~adiVvitag~~~~~--g~~---r~~l~~~n----~~i~~~i~~~i~~~~p~aivivvtN  119 (142)
T d1ojua1          69 GSEIIVVTAGLARKP--GMT---RLDLAHKN----AGIIKDIAKKIVENAPESKILVVTN  119 (142)
T ss_dssp             TCSEEEECCCCCCCS--SCC---HHHHHHHH----HHHHHHHHHHHHTTSTTCEEEECSS
T ss_pred             cccEEEEeccccCCC--CCc---hHHHHHHh----hHHHHHHHHHHHhhCCCcEEEEecC
Confidence            679999999975432  223   23334444    3455666666666544565666553

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.34  E-value=0.0029  Score=50.45  Aligned_cols=49  Identities=24%  Similarity=0.348  Sum_probs=42.4

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhh
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSE   76 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~   76 (302)
                      ..+++|.|+|.|+ ||.+++++.+|.+.| +|.++.|+.++.+...+.+..
T Consensus        14 ~~~~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~~~   62 (177)
T d1nvta1          14 GRVKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAE   62 (177)
T ss_dssp             CCCCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHH
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHHHH
Confidence            3479999999988 679999999998777 999999999999888877754

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=96.32  E-value=0.0046  Score=49.08  Aligned_cols=80  Identities=23%  Similarity=0.282  Sum_probs=53.9

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHH-HHHHHHHHHHhhC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGL-TVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPS-SIEAFVSWFKSNF  105 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~-~~~~~~~~~~~~~  105 (302)
                      -+|.+|+|.|+ ||+|...+..+...|+ +|+.++++.++++.+.+ +   |....   .|..+.+ .+.+......  .
T Consensus        26 ~~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~-l---Ga~~~---i~~~~~d~~~~~~~~~~~--~   95 (174)
T d1p0fa2          26 TPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIE-L---GATEC---LNPKDYDKPIYEVICEKT--N   95 (174)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH-T---TCSEE---ECGGGCSSCHHHHHHHHT--T
T ss_pred             CCCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHHHH-c---CCcEE---EcCCCchhHHHHHHHHhc--C
Confidence            56889999986 8999999999999996 79999999888765533 3   32222   2332222 1222323222  2


Q ss_pred             CCccEEEEcCCC
Q 022103          106 AALDILVNNAGV  117 (302)
Q Consensus       106 g~id~lv~~aG~  117 (302)
                      +.+|++|-++|.
T Consensus        96 ~G~d~vid~~g~  107 (174)
T d1p0fa2          96 GGVDYAVECAGR  107 (174)
T ss_dssp             SCBSEEEECSCC
T ss_pred             CCCcEEEEcCCC
Confidence            479999999886

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.27  E-value=0.0043  Score=50.23  Aligned_cols=44  Identities=18%  Similarity=0.235  Sum_probs=38.6

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHh
Q 022103           31 TIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLS   75 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~   75 (302)
                      |+|.|.|+ |-+|..+|..|+..|++|++++++++.++...+.+.
T Consensus         5 kkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~~i~   48 (192)
T d1f0ya2           5 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIE   48 (192)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHH
T ss_pred             EEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHHHHHhhHH
Confidence            78999999 779999999999999999999999988776666554

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=96.16  E-value=0.0036  Score=49.47  Aligned_cols=46  Identities=28%  Similarity=0.417  Sum_probs=40.0

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHh
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELGL-TVILTARDVERGQRAVESLS   75 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~~~~~~~~~~~l~   75 (302)
                      +++.|+|.|+ ||.+++++..|.+.|+ +|.++.|+.++.+...+...
T Consensus        16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~~   62 (167)
T d1npya1          16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYG   62 (167)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHT
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhhh
Confidence            6788999988 8899999999999997 69999999998887776553

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=96.07  E-value=0.016  Score=46.76  Aligned_cols=81  Identities=20%  Similarity=0.229  Sum_probs=52.5

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGL-TVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      -+|.+|+|.|+ |++|...+..+...|+ +|+++++++++++.+.+    .|...   ..|-.+. ++.+.+.++- ...
T Consensus        24 ~~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~----~Ga~~---~~~~~~~-~~~~~i~~~t-~g~   93 (195)
T d1kola2          24 GPGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAKA----QGFEI---ADLSLDT-PLHEQIAALL-GEP   93 (195)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH----TTCEE---EETTSSS-CHHHHHHHHH-SSS
T ss_pred             CCCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhhhh----ccccE---EEeCCCc-CHHHHHHHHh-CCC
Confidence            35889999986 8999888888777776 78999999877654432    23222   1222333 3333333332 224


Q ss_pred             CccEEEEcCCCC
Q 022103          107 ALDILVNNAGVS  118 (302)
Q Consensus       107 ~id~lv~~aG~~  118 (302)
                      .+|+++.+.|..
T Consensus        94 g~D~vid~vG~~  105 (195)
T d1kola2          94 EVDCAVDAVGFE  105 (195)
T ss_dssp             CEEEEEECCCTT
T ss_pred             CcEEEEECcccc
Confidence            699999999854

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=95.98  E-value=0.032  Score=40.83  Aligned_cols=77  Identities=16%  Similarity=0.180  Sum_probs=58.3

Q ss_pred             cccccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHH
Q 022103           23 STKWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFK  102 (302)
Q Consensus        23 ~~~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~  102 (302)
                      .+.......++.|.|| |-+|+-++.+..+.|+++++.+.+.+.-.        ...--.++..|..|.+.+.+++... 
T Consensus         4 ~~~~~~~~~kigIlGg-GQL~rMla~aA~~lG~~v~v~d~~~~~PA--------~~va~~~i~~~~~d~~~l~~~~~~~-   73 (111)
T d1kjqa2           4 GTALRPAATRVMLLGS-GELGKEVAIECQRLGVEVIAVDRYADAPA--------MHVAHRSHVINMLDGDALRRVVELE-   73 (111)
T ss_dssp             CCTTSTTCCEEEEESC-SHHHHHHHHHHHTTTCEEEEEESSTTCGG--------GGGSSEEEECCTTCHHHHHHHHHHH-
T ss_pred             CCCCCCCCCEEEEEeC-CHHHHHHHHHHHHCCCEEEEEcCCCCCch--------hhcCCeEEECCCCCHHHHHHHHHhh-
Confidence            4455566778999996 66999999999999999999998864311        0001267889999999999888765 


Q ss_pred             hhCCCccEEEE
Q 022103          103 SNFAALDILVN  113 (302)
Q Consensus       103 ~~~g~id~lv~  113 (302)
                          .+|++-.
T Consensus        74 ----~~DviT~   80 (111)
T d1kjqa2          74 ----KPHYIVP   80 (111)
T ss_dssp             ----CCSEEEE
T ss_pred             ----CCceEEE
Confidence                6788843

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=95.98  E-value=0.013  Score=45.50  Aligned_cols=41  Identities=22%  Similarity=0.292  Sum_probs=35.2

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRA   70 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~   70 (302)
                      +|.+++|.|+ |+||...+..+...|++|++++++.++++..
T Consensus        27 ~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~   67 (168)
T d1rjwa2          27 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELA   67 (168)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             CCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHhhhh
Confidence            5789999875 8899999888888899999999999887644

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=95.94  E-value=0.003  Score=44.90  Aligned_cols=75  Identities=16%  Similarity=0.208  Sum_probs=50.3

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      +++||+++|.|. |..|+++|+.|.++|++|++.+.+.....  .+++.+   ....+..... ...    +.       
T Consensus         2 ~~~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~~~~--~~~~~~---~~~~~~~~~~-~~~----~~-------   63 (93)
T d2jfga1           2 DYQGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMTPPG--LDKLPE---AVERHTGSLN-DEW----LM-------   63 (93)
T ss_dssp             CCTTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSSCTT--GGGSCT---TSCEEESBCC-HHH----HH-------
T ss_pred             CcCCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcCchh--HHHHhh---ccceeecccc-hhh----hc-------
Confidence            578999999999 66899999999999999999998654211  112221   2233333322 211    12       


Q ss_pred             CccEEEEcCCCCC
Q 022103          107 ALDILVNNAGVSF  119 (302)
Q Consensus       107 ~id~lv~~aG~~~  119 (302)
                      .+|.+|...|+..
T Consensus        64 ~~d~vi~SPGi~~   76 (93)
T d2jfga1          64 AADLIVASPGIAL   76 (93)
T ss_dssp             HCSEEEECTTSCT
T ss_pred             cCCEEEECCCCCC
Confidence            5799999999853

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=95.89  E-value=0.035  Score=42.88  Aligned_cols=115  Identities=11%  Similarity=0.153  Sum_probs=62.3

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHcCC-------EEEEEecCh--hhHHHHHHHHhhCC-CceeEEEeeCCCHHHHHHHHHH
Q 022103           31 TIAIVTGANKGIGFALVKRLAELGL-------TVILTARDV--ERGQRAVESLSEKG-LPVNFFQLDVSDPSSIEAFVSW  100 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~G~-------~V~l~~r~~--~~~~~~~~~l~~~~-~~~~~~~~Dlt~~~~~~~~~~~  100 (302)
                      -.|.|+||+|.+|.+++..|+..+.       .+++.+.+.  ++++....++.... .....+..--.+.+.       
T Consensus         4 ~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-------   76 (154)
T d5mdha1           4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIATDKEEIA-------   76 (154)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEEESCHHHH-------
T ss_pred             eEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhcccccccccccccCcccccc-------
Confidence            3799999999999999999987542       355555443  33344433343322 122222221111221       


Q ss_pred             HHhhCCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhc-CCCCCcEEEec
Q 022103          101 FKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRR-SPSKSRILNIS  165 (302)
Q Consensus       101 ~~~~~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~-~~~~~~iv~vs  165 (302)
                          +...|++|.++|....+  ..+.++   .+..|.    .+.+.+.+.+.+ .+..+.++.+|
T Consensus        77 ----~~~~dvVVitag~~~~~--g~sr~d---ll~~N~----~i~k~~~~~i~k~a~~~~~iivvs  129 (154)
T d5mdha1          77 ----FKDLDVAILVGSMPRRD--GMERKD---LLKANV----KIFKCQGAALDKYAKKSVKVIVVG  129 (154)
T ss_dssp             ----TTTCSEEEECCSCCCCT--TCCTTT---THHHHH----HHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             ----cCCceEEEEecccCCCC--CCchhH---HHHHhH----HHHHHHHHHHHhhCCCceEEEEec
Confidence                23789999999986542  122222   344443    455555555554 32334455554

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=95.79  E-value=0.0053  Score=49.37  Aligned_cols=44  Identities=16%  Similarity=0.174  Sum_probs=37.9

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHh
Q 022103           31 TIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLS   75 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~   75 (302)
                      |+|.|.|+ |-+|..+|..|+.+|++|++.+++++.++...+.+.
T Consensus         5 ~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~~~~i~   48 (186)
T d1wdka3           5 KQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAA   48 (186)
T ss_dssp             SSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHH
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHHhhhhhhhh
Confidence            56889999 779999999999999999999999988776666543

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=95.72  E-value=0.013  Score=45.97  Aligned_cols=79  Identities=18%  Similarity=0.260  Sum_probs=51.9

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGL-TVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      -+|.+|+|.|+ |++|...+..+...|+ +|+.+++++++++.+.+ +   +.. .++  |-. .+.++...+....  .
T Consensus        31 ~~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~-~---ga~-~~i--~~~-~~~~~~~~~~~~~--~   99 (172)
T d1h2ba2          31 YPGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAER-L---GAD-HVV--DAR-RDPVKQVMELTRG--R   99 (172)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHH-T---TCS-EEE--ETT-SCHHHHHHHHTTT--C
T ss_pred             CCCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHHhh-c---ccc-eee--cCc-ccHHHHHHHhhCC--C
Confidence            35789999986 9999999988888886 67777888876554433 2   322 222  333 3344444443222  3


Q ss_pred             CccEEEEcCCC
Q 022103          107 ALDILVNNAGV  117 (302)
Q Consensus       107 ~id~lv~~aG~  117 (302)
                      .+|++|.++|.
T Consensus       100 g~d~vid~~g~  110 (172)
T d1h2ba2         100 GVNVAMDFVGS  110 (172)
T ss_dssp             CEEEEEESSCC
T ss_pred             CceEEEEecCc
Confidence            69999999996

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.69  E-value=0.016  Score=49.81  Aligned_cols=25  Identities=16%  Similarity=0.190  Sum_probs=22.0

Q ss_pred             CchHHHHHHHHHHHcCCEEEEEecC
Q 022103           39 NKGIGFALVKRLAELGLTVILTARD   63 (302)
Q Consensus        39 s~gIG~ala~~l~~~G~~V~l~~r~   63 (302)
                      ||-.|.++|+.|..+|++|+++.+.
T Consensus        45 SGk~G~alA~~~~~~Ga~V~li~g~   69 (290)
T d1p9oa_          45 SGRRGATSAEAFLAAGYGVLFLYRA   69 (290)
T ss_dssp             CCHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             chHHHHHHHHHHHHcCCEEEEEecC
Confidence            4679999999999999999998654

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=95.37  E-value=0.04  Score=45.69  Aligned_cols=79  Identities=19%  Similarity=0.344  Sum_probs=52.0

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecC-------------------hhhHHHHHHHHhhCCCceeEEEee
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGL-TVILTARD-------------------VERGQRAVESLSEKGLPVNFFQLD   87 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~D   87 (302)
                      +++++|+|.|+ ||+|..+++.|++.|. ++++++.+                   ..|.+.+.+.+.+.+..+.+...+
T Consensus        28 L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~Ve~sNL~RQ~l~~~~diG~~K~~~a~~~l~~~np~~~i~~~~  106 (247)
T d1jw9b_          28 LKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVN  106 (247)
T ss_dssp             HHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred             HhCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCcccchhhhhhhccccHhhcCchHHHHHHHHHHHhhcccchhhhh
Confidence            78899999996 7899999999999998 68888763                   224555555666655555554444


Q ss_pred             CC-CHHHHHHHHHHHHhhCCCccEEEEc
Q 022103           88 VS-DPSSIEAFVSWFKSNFAALDILVNN  114 (302)
Q Consensus        88 lt-~~~~~~~~~~~~~~~~g~id~lv~~  114 (302)
                      .. +.........       ..|+++.+
T Consensus       107 ~~~~~~~~~~~~~-------~~divid~  127 (247)
T d1jw9b_         107 ALLDDAELAALIA-------EHDLVLDC  127 (247)
T ss_dssp             SCCCHHHHHHHHH-------TSSEEEEC
T ss_pred             hhhhhcccccccc-------ccceeeec
Confidence            33 2333333222       45676654

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=95.24  E-value=0.019  Score=46.71  Aligned_cols=43  Identities=26%  Similarity=0.305  Sum_probs=37.9

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRA   70 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~   70 (302)
                      +++||+|+|-|- |.+|..+|+.|.+.|++|++.+.+.+.+...
T Consensus        24 ~L~gk~v~IqG~-G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~   66 (201)
T d1c1da1          24 SLDGLTVLVQGL-GAVGGSLASLAAEAGAQLLVADTDTERVAHA   66 (201)
T ss_dssp             CSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEecchHHHHHHH
Confidence            689999999985 6699999999999999999999988766544

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.24  E-value=0.0074  Score=46.52  Aligned_cols=38  Identities=18%  Similarity=0.311  Sum_probs=34.1

Q ss_pred             cccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecC
Q 022103           25 KWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARD   63 (302)
Q Consensus        25 ~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~   63 (302)
                      .+.++||++||.|| |.+|..-++.|.+.|++|++++..
T Consensus         8 ~~~l~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap~   45 (150)
T d1kyqa1           8 AHQLKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPD   45 (150)
T ss_dssp             EECCTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred             heeeCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence            46799999999999 569999999999999999999654

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=95.14  E-value=0.044  Score=39.94  Aligned_cols=35  Identities=26%  Similarity=0.290  Sum_probs=31.3

Q ss_pred             CcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChh
Q 022103           30 ETIAIVTGANKGIGFALVKRLAELGLTVILTARDVE   65 (302)
Q Consensus        30 ~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~   65 (302)
                      .+.++|.|| |.+|.++|..|++.|.+|.++.|...
T Consensus        22 p~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~   56 (117)
T d1ebda2          22 PKSLVVIGG-GYIGIELGTAYANFGTKVTILEGAGE   56 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCeEEEECC-CccceeeeeeecccccEEEEEEecce
Confidence            378899988 78999999999999999999998763

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=95.10  E-value=0.038  Score=42.76  Aligned_cols=65  Identities=12%  Similarity=0.192  Sum_probs=44.9

Q ss_pred             EEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhC-------CCceeEEEeeCCCHHHHHHHH
Q 022103           33 AIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEK-------GLPVNFFQLDVSDPSSIEAFV   98 (302)
Q Consensus        33 vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~-------~~~~~~~~~Dlt~~~~~~~~~   98 (302)
                      +-|.|- |-+|..+|+.|+++|++|++.+|++++.+...+.-...       -.+..++..=+.+.+.++.++
T Consensus         3 IgiIGl-G~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~d~ii~~v~~~~~v~~v~   74 (161)
T d1vpda2           3 VGFIGL-GIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVA   74 (161)
T ss_dssp             EEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHH
T ss_pred             EEEEeh-hHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHHhhhhhcccHHHHHhCCCeEEEEcCCHHHHHHHH
Confidence            556665 77999999999999999999999998877665421110       012334444566677777765

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=94.97  E-value=0.032  Score=43.51  Aligned_cols=80  Identities=19%  Similarity=0.243  Sum_probs=51.5

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHH-HHHHHHHHHhhC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGL-TVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSS-IEAFVSWFKSNF  105 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~-~~~~~~~~~~~~  105 (302)
                      .+|.+|+|.|+ ||+|...+..+...|. +|++++++.++++.+.+ +   |....   .|.++.++ .++.......  
T Consensus        27 k~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~-~---GAd~~---in~~~~~~~~~~~~~~~~~--   96 (175)
T d1cdoa2          27 EPGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKV-F---GATDF---VNPNDHSEPISQVLSKMTN--   96 (175)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-T---TCCEE---ECGGGCSSCHHHHHHHHHT--
T ss_pred             CCCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHHHH-c---CCcEE---EcCCCcchhHHHHHHhhcc--
Confidence            46789999986 6688888888888765 78999999888765433 3   33322   23332221 2333333322  


Q ss_pred             CCccEEEEcCCC
Q 022103          106 AALDILVNNAGV  117 (302)
Q Consensus       106 g~id~lv~~aG~  117 (302)
                      +.+|+++-++|.
T Consensus        97 ~G~d~vid~~G~  108 (175)
T d1cdoa2          97 GGVDFSLECVGN  108 (175)
T ss_dssp             SCBSEEEECSCC
T ss_pred             CCcceeeeecCC
Confidence            479999999987

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=94.96  E-value=0.04  Score=45.29  Aligned_cols=77  Identities=13%  Similarity=-0.015  Sum_probs=61.5

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      ...++++||=.|++.|.   ++..|+++|.+|+.++.+++-++.+.+.+...+.++.++..|+.+..           ..
T Consensus        34 ~~~~~~~vLDiGCG~G~---~~~~l~~~g~~v~GvD~S~~ml~~A~~~~~~~~~~v~~~~~d~~~~~-----------~~   99 (246)
T d1y8ca_          34 NNLVFDDYLDLACGTGN---LTENLCPKFKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLN-----------IN   99 (246)
T ss_dssp             TTCCTTEEEEETCTTST---THHHHGGGSSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCC-----------CS
T ss_pred             hCCCCCeEEEEeCcCCH---HHHHHHHhCCccEeeccchhhhhhccccccccCccceeeccchhhhc-----------cc
Confidence            34667899999998875   78888999999999999998888877777777778899999887543           12


Q ss_pred             CCccEEEEcCC
Q 022103          106 AALDILVNNAG  116 (302)
Q Consensus       106 g~id~lv~~aG  116 (302)
                      +++|+|++.-+
T Consensus       100 ~~fD~i~~~~~  110 (246)
T d1y8ca_         100 RKFDLITCCLD  110 (246)
T ss_dssp             CCEEEEEECTT
T ss_pred             ccccccceeee
Confidence            47999987544

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=94.92  E-value=0.18  Score=38.77  Aligned_cols=85  Identities=14%  Similarity=0.133  Sum_probs=54.3

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHcCC--EEEEEecChhhHHHHHHHHhhC---------C-CceeEEEeeCCCHHHHHHHH
Q 022103           31 TIAIVTGANKGIGFALVKRLAELGL--TVILTARDVERGQRAVESLSEK---------G-LPVNFFQLDVSDPSSIEAFV   98 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~G~--~V~l~~r~~~~~~~~~~~l~~~---------~-~~~~~~~~Dlt~~~~~~~~~   98 (302)
                      |.++|.|. |-||..+|+.|.+.|+  +|++.+|+.+.++...+.-.-.         . ....++.. -+-.+.+.+++
T Consensus         2 k~I~IIG~-G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~dlIil-a~p~~~~~~vl   79 (171)
T d2g5ca2           2 QNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVML-SSPVRTFREIA   79 (171)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEE-CSCHHHHHHHH
T ss_pred             CEEEEEcc-CHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhcchhhhhhhhhhhccccccccc-cCCchhhhhhh
Confidence            35888875 8899999999999996  7888999988777655532100         0 01111111 12356677888


Q ss_pred             HHHHhhCCCccEEEEcCCC
Q 022103           99 SWFKSNFAALDILVNNAGV  117 (302)
Q Consensus        99 ~~~~~~~g~id~lv~~aG~  117 (302)
                      +++...+..=.+++..++.
T Consensus        80 ~~l~~~~~~~~ii~d~~s~   98 (171)
T d2g5ca2          80 KKLSYILSEDATVTDQGSV   98 (171)
T ss_dssp             HHHHHHSCTTCEEEECCSC
T ss_pred             hhhhccccccccccccccc
Confidence            8887765544555555544

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=94.90  E-value=0.051  Score=40.17  Aligned_cols=36  Identities=19%  Similarity=0.192  Sum_probs=31.9

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecCh
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDV   64 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~   64 (302)
                      .++|+++|.|| |.+|.++|..|++.|.+|.++.|..
T Consensus        28 ~~~k~vvViGg-G~iG~E~A~~l~~~g~~Vtlie~~~   63 (123)
T d1nhpa2          28 PEVNNVVVIGS-GYIGIEAAEAFAKAGKKVTVIDILD   63 (123)
T ss_dssp             TTCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             cCCCEEEEECC-hHHHHHHHHHhhccceEEEEEEecC
Confidence            45778888887 7899999999999999999998875

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=94.80  E-value=0.26  Score=38.42  Aligned_cols=80  Identities=24%  Similarity=0.210  Sum_probs=61.0

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      ..+..+|+|.|+ |-.|++-++...+.|++|.+++.+.+++++.......   .+   ..-.++.+.+.+.+.       
T Consensus        29 gv~pa~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~---~~---~~~~~~~~~l~~~~~-------   94 (168)
T d1pjca1          29 GVKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGS---RV---ELLYSNSAEIETAVA-------   94 (168)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG---GS---EEEECCHHHHHHHHH-------
T ss_pred             CCCCcEEEEECC-ChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhcc---cc---eeehhhhhhHHHhhc-------
Confidence            355678999998 6699999999999999999999999988877666543   22   233556666665555       


Q ss_pred             CccEEEEcCCCCCC
Q 022103          107 ALDILVNNAGVSFN  120 (302)
Q Consensus       107 ~id~lv~~aG~~~~  120 (302)
                      ..|+||.++-+...
T Consensus        95 ~aDivI~aalipG~  108 (168)
T d1pjca1          95 EADLLIGAVLVPGR  108 (168)
T ss_dssp             TCSEEEECCCCTTS
T ss_pred             cCcEEEEeeecCCc
Confidence            57999999987644

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.76  E-value=0.041  Score=40.65  Aligned_cols=34  Identities=18%  Similarity=0.200  Sum_probs=30.6

Q ss_pred             CcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecCh
Q 022103           30 ETIAIVTGANKGIGFALVKRLAELGLTVILTARDV   64 (302)
Q Consensus        30 ~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~   64 (302)
                      .|+++|.|| |.||.++|..|++.|.+|.++.|..
T Consensus        23 p~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~   56 (122)
T d1v59a2          23 PKRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQP   56 (122)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCeEEEECC-CchHHHHHHHHHhhCcceeEEEecc
Confidence            368888888 7899999999999999999999875

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=94.74  E-value=0.029  Score=44.76  Aligned_cols=37  Identities=30%  Similarity=0.215  Sum_probs=33.9

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecCh
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDV   64 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~   64 (302)
                      .+.||++.|.|.+ .||+.+++.+...|++|+..+|+.
T Consensus        39 ~l~gk~vgIiG~G-~IG~~va~~l~~~g~~v~~~d~~~   75 (181)
T d1qp8a1          39 LIQGEKVAVLGLG-EIGTRVGKILAALGAQVRGFSRTP   75 (181)
T ss_dssp             CCTTCEEEEESCS-THHHHHHHHHHHTTCEEEEECSSC
T ss_pred             cccCceEEEeccc-cccccceeeeeccccccccccccc
Confidence            4889999999995 599999999999999999999875

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=94.71  E-value=0.071  Score=39.28  Aligned_cols=36  Identities=19%  Similarity=0.313  Sum_probs=32.1

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChh
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVE   65 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~   65 (302)
                      ++++++|.|| |.+|.++|..|++.|.+|.++.+..+
T Consensus        29 ~~~~vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~~~~   64 (121)
T d1d7ya2          29 PQSRLLIVGG-GVIGLELAATARTAGVHVSLVETQPR   64 (121)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             cCCeEEEECc-chhHHHHHHHhhcccceEEEEeeccc
Confidence            3678999888 78999999999999999999999764

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=94.59  E-value=0.073  Score=38.98  Aligned_cols=35  Identities=29%  Similarity=0.153  Sum_probs=30.8

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecCh
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELGLTVILTARDV   64 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~   64 (302)
                      -.+.++|.|| |.||.++|..|++.|.+|.++.|..
T Consensus        21 ~p~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~~   55 (119)
T d3lada2          21 VPGKLGVIGA-GVIGLELGSVWARLGAEVTVLEAMD   55 (119)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CCCeEEEECC-ChHHHHHHHHHHHcCCceEEEEeec
Confidence            3477899988 7899999999999999999998864

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=94.57  E-value=0.059  Score=43.46  Aligned_cols=41  Identities=17%  Similarity=0.161  Sum_probs=35.7

Q ss_pred             cccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhh
Q 022103           25 KWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVER   66 (302)
Q Consensus        25 ~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~   66 (302)
                      ...+.||++.|.|- |.||+.+|+.|...|++|+..++....
T Consensus        38 g~el~gk~vgIiG~-G~IG~~va~~l~~fg~~V~~~d~~~~~   78 (197)
T d1j4aa1          38 GREVRDQVVGVVGT-GHIGQVFMQIMEGFGAKVITYDIFRNP   78 (197)
T ss_dssp             BCCGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCH
T ss_pred             CccccCCeEEEecc-cccchhHHHhHhhhcccccccCccccc
Confidence            45689999999998 669999999999999999999876543

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=94.55  E-value=0.12  Score=39.84  Aligned_cols=85  Identities=8%  Similarity=0.031  Sum_probs=53.5

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhC-------CCceeEEEeeCCCHHHHHHHHHH---H
Q 022103           32 IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEK-------GLPVNFFQLDVSDPSSIEAFVSW---F  101 (302)
Q Consensus        32 ~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~-------~~~~~~~~~Dlt~~~~~~~~~~~---~  101 (302)
                      +|.|.|- |-+|.++|++|+++|++|.+.+|+.++.+...+.-...       .....++..-+.+.+.++.++..   +
T Consensus         3 kIg~IGl-G~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~diii~~v~~~~~~~~v~~~~~~~   81 (162)
T d3cuma2           3 QIAFIGL-GHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDGL   81 (162)
T ss_dssp             EEEEECC-STTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTSCSEEEECCSCHHHHHHHHHSTTCH
T ss_pred             EEEEEEE-HHHHHHHHHHHHHCCCeEEEEECchhhhhhhhhhhccccchhhhhccccCeeeecccchhhHHHHHhccccc
Confidence            4666665 77999999999999999999999988766554322110       11234555556666777766543   2


Q ss_pred             HhhCCCccEEEEcCCC
Q 022103          102 KSNFAALDILVNNAGV  117 (302)
Q Consensus       102 ~~~~g~id~lv~~aG~  117 (302)
                      .....+=++++.+...
T Consensus        82 ~~~l~~g~iiid~st~   97 (162)
T d3cuma2          82 LAHIAPGTLVLECSTI   97 (162)
T ss_dssp             HHHSCTTCEEEECSCC
T ss_pred             cccCCCCCEEEECCCC
Confidence            2333233455554444

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.51  E-value=0.04  Score=43.18  Aligned_cols=45  Identities=24%  Similarity=0.288  Sum_probs=39.1

Q ss_pred             cccccccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhh
Q 022103           21 VSSTKWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVER   66 (302)
Q Consensus        21 ~~~~~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~   66 (302)
                      ...+...+.||+++|.|- |-||+.+|+.|...|++|++++.++.+
T Consensus        15 ~r~t~~~l~Gk~v~V~Gy-G~iG~g~A~~~rg~G~~V~v~e~dp~~   59 (163)
T d1li4a1          15 KRATDVMIAGKVAVVAGY-GDVGKGCAQALRGFGARVIITEIDPIN   59 (163)
T ss_dssp             HHHHCCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             HHHhCceecCCEEEEecc-ccccHHHHHHHHhCCCeeEeeecccch
Confidence            344566789999999998 479999999999999999999999844

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=94.47  E-value=0.018  Score=44.28  Aligned_cols=34  Identities=21%  Similarity=0.132  Sum_probs=30.6

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhh
Q 022103           32 IAIVTGANKGIGFALVKRLAELGLTVILTARDVER   66 (302)
Q Consensus        32 ~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~   66 (302)
                      +++|.|+ |.||..++..|++.|++|.+++|+.++
T Consensus         2 kI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~   35 (167)
T d1ks9a2           2 KITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQP   35 (167)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCS
T ss_pred             EEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHH
Confidence            4788888 999999999999999999999998754

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.46  E-value=0.065  Score=39.61  Aligned_cols=34  Identities=24%  Similarity=0.275  Sum_probs=30.5

Q ss_pred             CcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecCh
Q 022103           30 ETIAIVTGANKGIGFALVKRLAELGLTVILTARDV   64 (302)
Q Consensus        30 ~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~   64 (302)
                      .|+++|.|| |.||.++|..|++.|.+|.++.|+.
T Consensus        22 pk~vvIvGg-G~iG~E~A~~l~~~G~~Vtlv~~~~   55 (125)
T d3grsa2          22 PGRSVIVGA-GYIAVEMAGILSALGSKTSLMIRHD   55 (125)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCEEEEEcC-CccHHHHHHHHhcCCcEEEEEeecc
Confidence            378899998 6799999999999999999999964

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=94.43  E-value=0.061  Score=39.41  Aligned_cols=34  Identities=21%  Similarity=0.288  Sum_probs=30.5

Q ss_pred             CcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecCh
Q 022103           30 ETIAIVTGANKGIGFALVKRLAELGLTVILTARDV   64 (302)
Q Consensus        30 ~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~   64 (302)
                      .|+++|.|| |.+|.++|..|++.|.+|.++.|..
T Consensus        22 p~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~   55 (117)
T d1onfa2          22 SKKIGIVGS-GYIAVELINVIKRLGIDSYIFARGN   55 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSS
T ss_pred             CCEEEEECC-chHHHHHHHHHHhccccceeeehhc
Confidence            478888888 7899999999999999999999864

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=94.40  E-value=0.13  Score=40.05  Aligned_cols=41  Identities=22%  Similarity=0.261  Sum_probs=34.6

Q ss_pred             EEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHH
Q 022103           33 AIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESL   74 (302)
Q Consensus        33 vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l   74 (302)
                      +-|.| .|-+|.++|+.|+++|++|.+.+|++++.+...++-
T Consensus         4 IGvIG-lG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~~   44 (178)
T d1pgja2           4 VGVVG-LGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKAN   44 (178)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHT
T ss_pred             EEEEe-ehHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcC
Confidence            44444 477999999999999999999999999888777654

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=94.35  E-value=0.065  Score=39.55  Aligned_cols=34  Identities=21%  Similarity=0.235  Sum_probs=30.8

Q ss_pred             CcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecCh
Q 022103           30 ETIAIVTGANKGIGFALVKRLAELGLTVILTARDV   64 (302)
Q Consensus        30 ~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~   64 (302)
                      .+.++|.|| |.||.++|..|++.|.+|.++.|+.
T Consensus        25 p~~~viiG~-G~iglE~A~~~~~~G~~Vtvi~~~~   58 (123)
T d1dxla2          25 PKKLVVIGA-GYIGLEMGSVWGRIGSEVTVVEFAS   58 (123)
T ss_dssp             CSEEEESCC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCeEEEEcc-chHHHHHHHHHHhcCCeEEEEEEcc
Confidence            478889988 7899999999999999999999875

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=94.27  E-value=0.024  Score=42.16  Aligned_cols=70  Identities=19%  Similarity=0.253  Sum_probs=50.5

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCccE
Q 022103           31 TIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDI  110 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id~  110 (302)
                      |.++|.|. |.+|+.+++.|.  |.+|++++.++++.+...    ..  .+.++.+|.++++.++++      ...+.+.
T Consensus         1 kHivI~G~-g~~g~~l~~~L~--~~~i~vi~~d~~~~~~~~----~~--~~~~i~Gd~~~~~~L~~a------~i~~A~~   65 (129)
T d2fy8a1           1 RHVVICGW-SESTLECLRELR--GSEVFVLAEDENVRKKVL----RS--GANFVHGDPTRVSDLEKA------NVRGARA   65 (129)
T ss_dssp             CCEEEESC-CHHHHHHHHTSC--GGGEEEEESCTTHHHHHH----HT--TCEEEESCTTSHHHHHHT------TCTTCSE
T ss_pred             CEEEEECC-CHHHHHHHHHHc--CCCCEEEEcchHHHHHHH----hc--CccccccccCCHHHHHHh------hhhcCcE
Confidence            46788886 679999999994  567888888887755432    22  467889999999876542      2246777


Q ss_pred             EEEcC
Q 022103          111 LVNNA  115 (302)
Q Consensus       111 lv~~a  115 (302)
                      ++.+.
T Consensus        66 vi~~~   70 (129)
T d2fy8a1          66 VIVNL   70 (129)
T ss_dssp             EEECC
T ss_pred             EEEec
Confidence            77654

>d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein PH1948
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=94.25  E-value=0.095  Score=42.12  Aligned_cols=76  Identities=25%  Similarity=0.211  Sum_probs=58.3

Q ss_pred             cccccCcEEEEeCCCch-HHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHH
Q 022103           25 KWWSKETIAIVTGANKG-IGFALVKRLAELGL-TVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFK  102 (302)
Q Consensus        25 ~~~~~~k~vlItGas~g-IG~ala~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~  102 (302)
                      .-+++|++||=-|+++| +|.    .++..|+ +|++++.+++.++.+.+.+...+.+..++..|+.+.           
T Consensus        42 ~~dl~g~~vLDlg~GtG~l~i----~a~~~g~~~v~~vdi~~~~~~~a~~N~~~~~~~~~~~~~d~~~~-----------  106 (201)
T d1wy7a1          42 LGDIEGKVVADLGAGTGVLSY----GALLLGAKEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSEF-----------  106 (201)
T ss_dssp             TTSSTTCEEEEETCTTCHHHH----HHHHTTCSEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGGC-----------
T ss_pred             cCCCCCCEEEECcCcchHHHH----HHHHcCCCEEEEEcCcHHHHHHHHHHHHHcCCCceEEECchhhh-----------
Confidence            34578999999998765 443    3456675 899999999888888888877777888888887543           


Q ss_pred             hhCCCccEEEEcCCC
Q 022103          103 SNFAALDILVNNAGV  117 (302)
Q Consensus       103 ~~~g~id~lv~~aG~  117 (302)
                        .+++|+||.|.-.
T Consensus       107 --~~~fD~Vi~nPP~  119 (201)
T d1wy7a1         107 --NSRVDIVIMNPPF  119 (201)
T ss_dssp             --CCCCSEEEECCCC
T ss_pred             --CCcCcEEEEcCcc
Confidence              2589999998754

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=94.22  E-value=0.19  Score=39.86  Aligned_cols=76  Identities=16%  Similarity=0.107  Sum_probs=58.6

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCc
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAAL  108 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~i  108 (302)
                      ++.+||=.|++.|.   ++..|++.|++|++++-+.+-++.+.+.+...+..+..+..|..+..          ...+.+
T Consensus        37 ~~~~ILDiGcG~G~---~~~~la~~~~~v~giD~S~~~i~~ak~~~~~~~~~~~~~~~d~~~l~----------~~~~~f  103 (226)
T d1ve3a1          37 KRGKVLDLACGVGG---FSFLLEDYGFEVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLS----------FEDKTF  103 (226)
T ss_dssp             SCCEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCC----------SCTTCE
T ss_pred             CCCEEEEECCCcch---hhhhHhhhhcccccccccccchhhhhhhhcccccccccccccccccc----------ccCcCc
Confidence            45678999998776   66788889999999999998888887777776777788888877643          111478


Q ss_pred             cEEEEcCCC
Q 022103          109 DILVNNAGV  117 (302)
Q Consensus       109 d~lv~~aG~  117 (302)
                      |+|++...+
T Consensus       104 D~I~~~~~l  112 (226)
T d1ve3a1         104 DYVIFIDSI  112 (226)
T ss_dssp             EEEEEESCG
T ss_pred             eEEEEecch
Confidence            999887654

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=94.10  E-value=0.072  Score=41.40  Aligned_cols=78  Identities=12%  Similarity=0.062  Sum_probs=55.6

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhC-------------CCceeEEEeeCCCHHHH
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEK-------------GLPVNFFQLDVSDPSSI   94 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~-------------~~~~~~~~~Dlt~~~~~   94 (302)
                      .+|.+||..|++.|   ..+..|+++|++|+.++-+..-++.+.+..++.             +....++.+|..+....
T Consensus        19 ~~~~rvLd~GCG~G---~~a~~la~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~   95 (201)
T d1pjza_          19 VPGARVLVPLCGKS---QDMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTAR   95 (201)
T ss_dssp             CTTCEEEETTTCCS---HHHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHH
T ss_pred             CCCCEEEEecCcCC---HHHHHHHHcCCceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceecccccccccc
Confidence            46889999999876   377789999999999999998888887777543             23346777787765421


Q ss_pred             HHHHHHHHhhCCCccEEEEcCCC
Q 022103           95 EAFVSWFKSNFAALDILVNNAGV  117 (302)
Q Consensus        95 ~~~~~~~~~~~g~id~lv~~aG~  117 (302)
                      .    .     ...|.++.....
T Consensus        96 ~----~-----~~~D~i~~~~~l  109 (201)
T d1pjza_          96 D----I-----GHCAAFYDRAAM  109 (201)
T ss_dssp             H----H-----HSEEEEEEESCG
T ss_pred             c----c-----cceeEEEEEeee
Confidence            0    0     256777664443

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=94.09  E-value=0.25  Score=39.35  Aligned_cols=36  Identities=17%  Similarity=0.040  Sum_probs=30.1

Q ss_pred             EEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHH
Q 022103           33 AIVTGANKGIGFALVKRLAELGLTVILTARDVERGQR   69 (302)
Q Consensus        33 vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~   69 (302)
                      +.|.| .|.+|..+|..|+++|++|++++.+.++.+.
T Consensus         3 I~ViG-lG~vGl~~a~~la~~g~~V~g~D~n~~~i~~   38 (202)
T d1mv8a2           3 ISIFG-LGYVGAVCAGCLSARGHEVIGVDVSSTKIDL   38 (202)
T ss_dssp             EEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHH
T ss_pred             EEEEC-CCHhHHHHHHHHHhCCCcEEEEeCCHHHHHH
Confidence            55664 5889999999999999999999999766443

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=94.09  E-value=0.12  Score=41.03  Aligned_cols=41  Identities=22%  Similarity=0.122  Sum_probs=35.9

Q ss_pred             cccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhh
Q 022103           25 KWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVER   66 (302)
Q Consensus        25 ~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~   66 (302)
                      ...+.+|++.|.|. |.||+++++.+...|++|+..++...+
T Consensus        39 ~~~l~~k~vgiiG~-G~IG~~va~~~~~fg~~v~~~d~~~~~   79 (184)
T d1ygya1          39 GTEIFGKTVGVVGL-GRIGQLVAQRIAAFGAYVVAYDPYVSP   79 (184)
T ss_dssp             BCCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSCH
T ss_pred             cccccceeeeeccc-cchhHHHHHHhhhccceEEeecCCCCh
Confidence            45688999999996 779999999999999999999987654

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=94.07  E-value=0.072  Score=38.82  Aligned_cols=34  Identities=26%  Similarity=0.135  Sum_probs=30.2

Q ss_pred             CcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecCh
Q 022103           30 ETIAIVTGANKGIGFALVKRLAELGLTVILTARDV   64 (302)
Q Consensus        30 ~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~   64 (302)
                      .|.++|.|| |.+|.++|..|++.|.+|.++.|..
T Consensus        21 p~~vvIiGg-G~ig~E~A~~l~~~G~~Vtlve~~~   54 (116)
T d1gesa2          21 PERVAVVGA-GYIGVELGGVINGLGAKTHLFEMFD   54 (116)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCEEEEECC-ChhhHHHHHHhhccccEEEEEeecc
Confidence            367888887 7899999999999999999999975

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=93.96  E-value=0.088  Score=38.18  Aligned_cols=34  Identities=24%  Similarity=0.255  Sum_probs=29.9

Q ss_pred             CcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecCh
Q 022103           30 ETIAIVTGANKGIGFALVKRLAELGLTVILTARDV   64 (302)
Q Consensus        30 ~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~   64 (302)
                      .++++|.|| |.+|.++|..|++.|.+|.++.|.+
T Consensus        21 p~~vvIiGg-G~~G~E~A~~l~~~g~~Vtlve~~~   54 (115)
T d1lvla2          21 PQHLVVVGG-GYIGLELGIAYRKLGAQVSVVEARE   54 (115)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCeEEEECC-CHHHHHHHHHHhhcccceEEEeeec
Confidence            367888877 8899999999999999999998864

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=93.95  E-value=0.16  Score=40.80  Aligned_cols=39  Identities=21%  Similarity=0.087  Sum_probs=34.8

Q ss_pred             cccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecCh
Q 022103           25 KWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDV   64 (302)
Q Consensus        25 ~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~   64 (302)
                      ...+.||++.|.|. |.||+.+|+.|...|++|+..++..
T Consensus        40 ~~~l~~ktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~   78 (199)
T d1dxya1          40 GKELGQQTVGVMGT-GHIGQVAIKLFKGFGAKVIAYDPYP   78 (199)
T ss_dssp             CCCGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             cccccceeeeeeec-ccccccccccccccceeeeccCCcc
Confidence            35688999999998 6699999999999999999998864

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=93.78  E-value=0.062  Score=43.15  Aligned_cols=40  Identities=15%  Similarity=0.183  Sum_probs=35.4

Q ss_pred             cccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChh
Q 022103           25 KWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVE   65 (302)
Q Consensus        25 ~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~   65 (302)
                      ...+.||++.|.|. |.||+.+|+.+...|++|+..++...
T Consensus        44 ~~eL~gktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~   83 (193)
T d1mx3a1          44 AARIRGETLGIIGL-GRVGQAVALRAKAFGFNVLFYDPYLS   83 (193)
T ss_dssp             CCCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSC
T ss_pred             ceeeeCceEEEecc-ccccccceeeeeccccceeeccCccc
Confidence            45689999999988 66999999999999999999988754

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=93.77  E-value=0.04  Score=44.66  Aligned_cols=34  Identities=32%  Similarity=0.435  Sum_probs=29.8

Q ss_pred             CcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecCh
Q 022103           30 ETIAIVTGANKGIGFALVKRLAELGLTVILTARDV   64 (302)
Q Consensus        30 ~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~   64 (302)
                      .|.|+|.|| |-.|.++|..|+++|++|++++|..
T Consensus         6 ~~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~~   39 (268)
T d1c0pa1           6 QKRVVVLGS-GVIGLSSALILARKGYSVHILARDL   39 (268)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CCcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            356888888 7799999999999999999999863

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=93.57  E-value=0.054  Score=42.51  Aligned_cols=45  Identities=22%  Similarity=0.149  Sum_probs=38.9

Q ss_pred             cccccccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChh
Q 022103           21 VSSTKWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVE   65 (302)
Q Consensus        21 ~~~~~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~   65 (302)
                      ..++..++.||+++|.|-+.-+|+.++..|.++|++|..+.....
T Consensus        28 L~~y~i~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~   72 (166)
T d1b0aa1          28 LERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTK   72 (166)
T ss_dssp             HHHTTCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCS
T ss_pred             HHHcCcccccceEEEEeccccccHHHHHHHHHhhccccccccccc
Confidence            345667899999999999999999999999999999988766543

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=93.57  E-value=0.094  Score=38.61  Aligned_cols=32  Identities=28%  Similarity=0.386  Sum_probs=28.8

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHcCCEEEEEecC
Q 022103           31 TIAIVTGANKGIGFALVKRLAELGLTVILTARD   63 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~   63 (302)
                      +.++|.|| |.||.++|..|.+.|.+|.++.|+
T Consensus        21 ~~vvIIGg-G~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          21 GKTLVVGA-SYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CeEEEECC-CccHHHHHHHHhhcCCeEEEEEec
Confidence            56888887 789999999999999999999886

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=93.56  E-value=0.03  Score=41.32  Aligned_cols=35  Identities=37%  Similarity=0.446  Sum_probs=31.1

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecCh
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELGLTVILTARDV   64 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~   64 (302)
                      +++.++|.|| |.+|.++|..|++.|.+|.++.|.+
T Consensus        31 ~~~~vvIiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~   65 (122)
T d1xhca2          31 NSGEAIIIGG-GFIGLELAGNLAEAGYHVKLIHRGA   65 (122)
T ss_dssp             HHSEEEEEEC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             cCCcEEEECC-cHHHHHHHHHhhcccceEEEEeccc
Confidence            3578888888 7899999999999999999999875

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=93.55  E-value=0.1  Score=41.76  Aligned_cols=43  Identities=16%  Similarity=0.055  Sum_probs=36.7

Q ss_pred             cccccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhh
Q 022103           23 STKWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVER   66 (302)
Q Consensus        23 ~~~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~   66 (302)
                      .....++|+++.|.|. |.||+.+|+.+...|++|+..++....
T Consensus        40 ~~~~~l~g~tvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~   82 (191)
T d1gdha1          40 LVGEKLDNKTLGIYGF-GSIGQALAKRAQGFDMDIDYFDTHRAS   82 (191)
T ss_dssp             TCBCCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCCC
T ss_pred             cccceecccceEEeec-ccchHHHHHHHHhhccccccccccccc
Confidence            3456788999999998 669999999999999999999886543

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=93.51  E-value=0.033  Score=45.60  Aligned_cols=34  Identities=26%  Similarity=0.241  Sum_probs=29.9

Q ss_pred             CcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecCh
Q 022103           30 ETIAIVTGANKGIGFALVKRLAELGLTVILTARDV   64 (302)
Q Consensus        30 ~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~   64 (302)
                      +|+|+|.|| |-=|...|..|+++|++|+++.++.
T Consensus         1 ~KkV~IIGa-G~aGL~aA~~La~~G~~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVIGA-GVSGLAAAYKLKIHGLNVTVFEAEG   34 (373)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTSCEEEEECSSS
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            578999988 6678999999999999999998865

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.44  E-value=0.032  Score=50.54  Aligned_cols=35  Identities=31%  Similarity=0.465  Sum_probs=30.7

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGL-TVILTARD   63 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~   63 (302)
                      +++..|+|.|+ ||||.++++.|+..|. ++.+++.+
T Consensus        35 l~~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D   70 (426)
T d1yovb1          35 LDTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMD   70 (426)
T ss_dssp             HHHCCEEEECS-STTHHHHHHHHHTTTCCCEEEECCC
T ss_pred             HhcCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECC
Confidence            56778999999 6799999999999998 68888774

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=93.32  E-value=0.16  Score=36.85  Aligned_cols=35  Identities=11%  Similarity=0.145  Sum_probs=31.6

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecCh
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELGLTVILTARDV   64 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~   64 (302)
                      +++.++|.|| |.||.++|..|++.|.+|.++.|.+
T Consensus        21 ~~~~vvVvGg-G~ig~E~A~~l~~~g~~vt~i~~~~   55 (121)
T d1mo9a2          21 PGSTVVVVGG-SKTAVEYGCFFNATGRRTVMLVRTE   55 (121)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcchhheEeeccc
Confidence            4688999988 7899999999999999999999875

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.31  E-value=0.055  Score=42.64  Aligned_cols=46  Identities=20%  Similarity=0.085  Sum_probs=40.1

Q ss_pred             cccccccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhh
Q 022103           21 VSSTKWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVER   66 (302)
Q Consensus        21 ~~~~~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~   66 (302)
                      ..++..+++||+++|.|-+.-+|+.++..|+++|+.|..+......
T Consensus        30 L~~~~i~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~   75 (170)
T d1a4ia1          30 IKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAH   75 (170)
T ss_dssp             HHTTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSS
T ss_pred             HHHhCcccccceEEEEecCCccchHHHHHHHhccCceEEEeccccc
Confidence            3456778999999999999999999999999999999988776544

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=93.20  E-value=0.16  Score=38.32  Aligned_cols=77  Identities=18%  Similarity=0.272  Sum_probs=54.7

Q ss_pred             EEEEeCCCchHHHHHHHHHHHc-CCEEEE-EecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCcc
Q 022103           32 IAIVTGANKGIGFALVKRLAEL-GLTVIL-TARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALD  109 (302)
Q Consensus        32 ~vlItGas~gIG~ala~~l~~~-G~~V~l-~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id  109 (302)
                      ++.|.|++|-+|+++++.+.+. +++++. +++.. .+.    .+...+.+   +..|+|.++.+.+.++.+.+.  ++-
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~-~~~----~~~~~~~D---vvIDFS~p~~~~~~~~~~~~~--~~~   70 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGD-PLS----LLTDGNTE---VVIDFTHPDVVMGNLEFLIDN--GIH   70 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTC-CTH----HHHTTTCS---EEEECCCTTTHHHHHHHHHHT--TCE
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCC-chh----hhccccCC---EEEEcccHHHHHHHHHHHHhc--CCC
Confidence            4889999999999999998775 677654 34432 221    12222222   457999999999999988875  567


Q ss_pred             EEEEcCCCC
Q 022103          110 ILVNNAGVS  118 (302)
Q Consensus       110 ~lv~~aG~~  118 (302)
                      +|+-..|..
T Consensus        71 ~ViGTTG~~   79 (135)
T d1yl7a1          71 AVVGTTGFT   79 (135)
T ss_dssp             EEECCCCCC
T ss_pred             EEEeccccc
Confidence            888777774

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=93.15  E-value=0.78  Score=35.47  Aligned_cols=118  Identities=16%  Similarity=0.193  Sum_probs=62.5

Q ss_pred             EEEEeCCCchHHHHHHHHHHH-c----CCEEEEEecChhhHHHHHHHHhhC----CCceeEEEeeCCCHHHHHHHHHHHH
Q 022103           32 IAIVTGANKGIGFALVKRLAE-L----GLTVILTARDVERGQRAVESLSEK----GLPVNFFQLDVSDPSSIEAFVSWFK  102 (302)
Q Consensus        32 ~vlItGas~gIG~ala~~l~~-~----G~~V~l~~r~~~~~~~~~~~l~~~----~~~~~~~~~Dlt~~~~~~~~~~~~~  102 (302)
                      .+.|.||++.-...+...++. .    +-+|++++.+.++++.....+...    +........  +|..   +.+    
T Consensus         5 KI~iIGaGsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~~--~d~~---eal----   75 (167)
T d1u8xx1           5 SIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAAT--TDPE---EAF----   75 (167)
T ss_dssp             EEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEE--SCHH---HHH----
T ss_pred             eEEEECCChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEec--CChh---hcc----
Confidence            466667755322223333333 2    237999999999887555544331    223333321  1222   122    


Q ss_pred             hhCCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhh----------------hHHHHHHHHHhhhhhcCCCCCcEEEecC
Q 022103          103 SNFAALDILVNNAGVSFNDIYKNTVEHAETVIRTNF----------------YGAKLLTESLLPLFRRSPSKSRILNISS  166 (302)
Q Consensus       103 ~~~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~----------------~~~~~l~~~~~~~l~~~~~~~~iv~vsS  166 (302)
                         ...|+||..+|....     .-+..++.+..|+                +-..-+++.+.+.+.+....+-++++|-
T Consensus        76 ---~~AD~Vvitag~~~~-----~g~~rd~~i~~~~Gi~~~~t~g~gg~~~~~r~i~ii~~i~~~i~~~~P~A~li~~TN  147 (167)
T d1u8xx1          76 ---TDVDFVMAHIRVGKY-----AMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYSPDAWMLNYSN  147 (167)
T ss_dssp             ---SSCSEEEECCCTTHH-----HHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred             ---CCCCEEEECCCcCCC-----CceeHHHhhchhcCceeeccccCcchheehhhHHHHHHHHHHHHhhCCCeEEEEeCC
Confidence               368999999998532     1122223333331                2234556677777777645566666653

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=93.12  E-value=0.11  Score=43.39  Aligned_cols=74  Identities=19%  Similarity=0.239  Sum_probs=56.1

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      ..+|++||=.|+++|+   ++..+++.|++|+.++.++.-++.+.+.....+....++..|+.+         ..  ..+
T Consensus       118 ~~~g~~VLDiGcGsG~---l~i~aa~~g~~V~gvDis~~av~~A~~na~~n~~~~~~~~~d~~~---------~~--~~~  183 (254)
T d2nxca1         118 LRPGDKVLDLGTGSGV---LAIAAEKLGGKALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEA---------AL--PFG  183 (254)
T ss_dssp             CCTTCEEEEETCTTSH---HHHHHHHTTCEEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHH---------HG--GGC
T ss_pred             cCccCEEEEcccchhH---HHHHHHhcCCEEEEEECChHHHHHHHHHHHHcCCceeEEeccccc---------cc--ccc
Confidence            4678999999999886   334567789999999999998888888777766677777776421         11  125


Q ss_pred             CccEEEEc
Q 022103          107 ALDILVNN  114 (302)
Q Consensus       107 ~id~lv~~  114 (302)
                      ++|.++.|
T Consensus       184 ~fD~V~an  191 (254)
T d2nxca1         184 PFDLLVAN  191 (254)
T ss_dssp             CEEEEEEE
T ss_pred             ccchhhhc
Confidence            89999876

>d1u0sy_ c.23.1.1 (Y:) CheY protein {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: CheY protein
species: Thermotoga maritima [TaxId: 2336]

Probab=93.10  E-value=0.46  Score=34.29  Aligned_cols=82  Identities=15%  Similarity=0.115  Sum_probs=58.0

Q ss_pred             CcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCcc
Q 022103           30 ETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALD  109 (302)
Q Consensus        30 ~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id  109 (302)
                      ||+|||.=-..-+-..+...|.+.|++|+....+.+.   +.+.+.+...++.+....+-+.+.+ ++++++++....+-
T Consensus         1 GkrILivDD~~~~~~~l~~~L~~~g~~v~~~a~~~~~---al~~~~~~~~dliilD~~mp~~~G~-e~~~~ir~~~~~~p   76 (118)
T d1u0sy_           1 GKRVLIVDDAAFMRMMLKDIITKAGYEVAGEATNGRE---AVEKYKELKPDIVTMDITMPEMNGI-DAIKEIMKIDPNAK   76 (118)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEEEESSHHH---HHHHHHHHCCSEEEEECSCGGGCHH-HHHHHHHHHCTTCC
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCHHH---HHHHHHhccCCEEEEecCCCCCCHH-HHHHHHHHhCCCCc
Confidence            7899999999999999999999999999876666533   3334444445666666555565544 56777777767777


Q ss_pred             EEEEcC
Q 022103          110 ILVNNA  115 (302)
Q Consensus       110 ~lv~~a  115 (302)
                      +++..+
T Consensus        77 vi~ls~   82 (118)
T d1u0sy_          77 IIVCSA   82 (118)
T ss_dssp             EEEEEC
T ss_pred             EEEEEc
Confidence            776653

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=93.05  E-value=0.16  Score=40.23  Aligned_cols=39  Identities=23%  Similarity=0.272  Sum_probs=34.8

Q ss_pred             cccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecCh
Q 022103           25 KWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDV   64 (302)
Q Consensus        25 ~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~   64 (302)
                      ...++++++.|.|. |.||+++++.|...|++|+..+|..
T Consensus        39 ~~~l~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~   77 (188)
T d2naca1          39 AYDLEAMHVGTVAA-GRIGLAVLRRLAPFDVHLHYTDRHR   77 (188)
T ss_dssp             CCCCTTCEEEEECC-SHHHHHHHHHHGGGTCEEEEECSSC
T ss_pred             ceeccccceeeccc-cccchhhhhhhhccCceEEEEeecc
Confidence            45689999999997 6699999999999999999999864

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=93.03  E-value=0.11  Score=42.79  Aligned_cols=49  Identities=20%  Similarity=0.134  Sum_probs=42.2

Q ss_pred             cccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHH
Q 022103           25 KWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESL   74 (302)
Q Consensus        25 ~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l   74 (302)
                      ..+++|++++|-|- |-+|..+|+.|.+.|++|+.++.+...++....+.
T Consensus        34 ~~~l~g~~v~IqG~-GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~~   82 (230)
T d1leha1          34 SDSLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEE   82 (230)
T ss_dssp             SCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHhc
Confidence            34689999999998 66999999999999999999999988877666654

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=93.03  E-value=0.13  Score=39.12  Aligned_cols=37  Identities=14%  Similarity=0.085  Sum_probs=30.0

Q ss_pred             cCcEEEEe-CCCchHHHHHHHHHHHcCCEEEEEecChh
Q 022103           29 KETIAIVT-GANKGIGFALVKRLAELGLTVILTARDVE   65 (302)
Q Consensus        29 ~~k~vlIt-Gas~gIG~ala~~l~~~G~~V~l~~r~~~   65 (302)
                      .++.++|. .+++.||.++|..|++.|.+|.++.+...
T Consensus        38 ~~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~~   75 (156)
T d1djqa2          38 IGKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVHL   75 (156)
T ss_dssp             CCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSCT
T ss_pred             cCCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCCc
Confidence            34555554 45689999999999999999999998753

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=93.03  E-value=0.06  Score=43.00  Aligned_cols=41  Identities=24%  Similarity=0.169  Sum_probs=34.0

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHH
Q 022103           31 TIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVE   72 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~   72 (302)
                      +.+.|.|+ |..|.++|..|++.|++|.+.+|+.+..+...+
T Consensus         8 ~KI~ViGa-G~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~~   48 (189)
T d1n1ea2           8 NKAVVFGS-GAFGTALAMVLSKKCREVCVWHMNEEEVRLVNE   48 (189)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHTTEEEEEEECSCHHHHHHHHH
T ss_pred             ceEEEECC-CHHHHHHHHHHHHcCCeEEEEEecHHHHHHHhh
Confidence            35889988 559999999999999999999999876655443

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=92.98  E-value=0.084  Score=41.81  Aligned_cols=38  Identities=24%  Similarity=0.137  Sum_probs=33.4

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecCh
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDV   64 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~   64 (302)
                      ...++|.|+|.|| |.-|.+.|..|+++|++|+++.+..
T Consensus        39 ~~~~~k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~~   76 (179)
T d1ps9a3          39 PAVQKKNLAVVGA-GPAGLAFAINAAARGHQVTLFDAHS   76 (179)
T ss_dssp             SCSSCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             CCCCCcEEEEECc-cHHHHHHHHHHHhhccceEEEeccC
Confidence            4466789999998 7799999999999999999999865

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=92.93  E-value=0.17  Score=40.36  Aligned_cols=84  Identities=21%  Similarity=0.215  Sum_probs=65.7

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCc
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAAL  108 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~i  108 (302)
                      .+..+=+|.|+||...++++.+ . +.+|++++++++.++.+.+.+...+.++.++..++.+...+   +...  ....+
T Consensus        24 ~~~~lD~t~G~Gghs~~il~~~-~-~~~vi~~D~d~~~l~~a~~~l~~~~~r~~~~~~~f~~~~~~---~~~~--~~~~v   96 (192)
T d1m6ya2          24 EKIILDCTVGEGGHSRAILEHC-P-GCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADFL---LKTL--GIEKV   96 (192)
T ss_dssp             TCEEEETTCTTSHHHHHHHHHC-T-TCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHHH---HHHT--TCSCE
T ss_pred             CCEEEEecCCCcHHHHHHHhcC-C-CCeEEEeechHHHHHHHHHhhccccccccchhHHHhhHHHH---HHHc--CCCCc
Confidence            3445557788899999988887 3 46999999999999999998888888899999998876543   2222  13589


Q ss_pred             cEEEEcCCCCC
Q 022103          109 DILVNNAGVSF  119 (302)
Q Consensus       109 d~lv~~aG~~~  119 (302)
                      |.++.-.|++.
T Consensus        97 dgIl~DlGvSs  107 (192)
T d1m6ya2          97 DGILMDLGVST  107 (192)
T ss_dssp             EEEEEECSCCH
T ss_pred             ceeeeccchhH
Confidence            99999999864

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=92.91  E-value=0.15  Score=41.42  Aligned_cols=74  Identities=20%  Similarity=0.131  Sum_probs=58.3

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      .+++++|=.|++.|   .++..|+++|++|++++.++.-++.+.+.+.+.+.++.++..|+.+...           .+.
T Consensus        40 ~~~~~iLDiGcGtG---~~~~~l~~~~~~v~gvD~s~~mi~~a~~~~~~~~~~i~~~~~d~~~l~~-----------~~~  105 (251)
T d1wzna1          40 REVRRVLDLACGTG---IPTLELAERGYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIAF-----------KNE  105 (251)
T ss_dssp             SCCCEEEEETCTTC---HHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCCC-----------CSC
T ss_pred             CCCCEEEEeCCCCC---ccchhhcccceEEEEEeeccccccccccccccccccchheehhhhhccc-----------ccc
Confidence            45678999999876   4466788999999999999988888888877777789999999876431           147


Q ss_pred             ccEEEEcC
Q 022103          108 LDILVNNA  115 (302)
Q Consensus       108 id~lv~~a  115 (302)
                      +|.|++.-
T Consensus       106 fD~I~~~~  113 (251)
T d1wzna1         106 FDAVTMFF  113 (251)
T ss_dssp             EEEEEECS
T ss_pred             cchHhhhh
Confidence            89888753

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=92.89  E-value=0.071  Score=42.01  Aligned_cols=42  Identities=26%  Similarity=0.355  Sum_probs=32.6

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhh
Q 022103           32 IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSE   76 (302)
Q Consensus        32 ~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~   76 (302)
                      .+.|.|+ |..|.++|..|++.|++|.+.+|..++  +..+.+++
T Consensus         2 kI~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~~--~~~~~i~~   43 (180)
T d1txga2           2 IVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFDT--EILKSISA   43 (180)
T ss_dssp             EEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGGH--HHHHHHHT
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCEEEEEEecccH--HHHHHHhh
Confidence            3678887 779999999999999999999996543  33445543

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=92.75  E-value=0.046  Score=42.78  Aligned_cols=35  Identities=17%  Similarity=0.218  Sum_probs=30.7

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcCCE-EEEEecCh
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELGLT-VILTARDV   64 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G~~-V~l~~r~~   64 (302)
                      .+|+|+|.|| |-.|...|..|+++|++ |+++.|..
T Consensus         3 ~~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~   38 (196)
T d1gtea4           3 YSAKIALLGA-GPASISCASFLARLGYSDITIFEKQE   38 (196)
T ss_dssp             GGCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSS
T ss_pred             CCCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecC
Confidence            4688999998 77999999999999995 99998865

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=92.61  E-value=0.15  Score=37.64  Aligned_cols=35  Identities=14%  Similarity=0.116  Sum_probs=31.0

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecCh
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELGLTVILTARDV   64 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~   64 (302)
                      ..+.++|.|| |.||.++|..|.+.|.+|.++.+..
T Consensus        25 ~p~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~~   59 (125)
T d1ojta2          25 VPGKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMMD   59 (125)
T ss_dssp             CCSEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             cCCeEEEECC-CHHHHHHHHHhhcCCCEEEEEEeec
Confidence            3578999998 8899999999999999999998864

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=92.50  E-value=0.23  Score=36.95  Aligned_cols=74  Identities=16%  Similarity=0.233  Sum_probs=55.6

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCEEEEE-ecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCccE
Q 022103           32 IAIVTGANKGIGFALVKRLAELGLTVILT-ARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDI  110 (302)
Q Consensus        32 ~vlItGas~gIG~ala~~l~~~G~~V~l~-~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id~  110 (302)
                      .+.|.|++|-+|+++++.+.++|++++.. +++....      +  ...+   +..|+|.++.+.+.++.+.+.  ++.+
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~~~------~--~~~D---VvIDFS~p~~~~~~l~~~~~~--~~p~   68 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGVEE------L--DSPD---VVIDFSSPEALPKTVDLCKKY--RAGL   68 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEEEE------C--SCCS---EEEECSCGGGHHHHHHHHHHH--TCEE
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCcHHH------h--ccCC---EEEEecCHHHHHHHHHHHHhc--CCCE
Confidence            38999999999999999999999987654 4433110      0  1122   356999999999999998876  5678


Q ss_pred             EEEcCCCC
Q 022103          111 LVNNAGVS  118 (302)
Q Consensus       111 lv~~aG~~  118 (302)
                      |+-+.|..
T Consensus        69 ViGTTG~~   76 (128)
T d1vm6a3          69 VLGTTALK   76 (128)
T ss_dssp             EECCCSCC
T ss_pred             EEEcCCCC
Confidence            88888874

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=92.48  E-value=0.072  Score=43.47  Aligned_cols=35  Identities=20%  Similarity=0.200  Sum_probs=30.4

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecCh
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELGLTVILTARDV   64 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~   64 (302)
                      ..++|+|.|| |--|..+|..|+++|++|+++.|+.
T Consensus         3 ~~~kV~IiGa-G~aGl~~A~~L~~~G~~v~v~Er~~   37 (265)
T d2voua1           3 TTDRIAVVGG-SISGLTAALMLRDAGVDVDVYERSP   37 (265)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCCcEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            4567999998 6789999999999999999999864

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=92.38  E-value=0.13  Score=41.26  Aligned_cols=72  Identities=26%  Similarity=0.176  Sum_probs=51.8

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhh
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGL-TVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSN  104 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~  104 (302)
                      -++.|++||=.|+++|+   ++..++..|+ +|+.++.+.+.++.+.+.+    ..+.++.+|+.+..            
T Consensus        45 ~dl~Gk~VLDlGcGtG~---l~i~a~~~ga~~V~~vDid~~a~~~ar~N~----~~~~~~~~D~~~l~------------  105 (197)
T d1ne2a_          45 GNIGGRSVIDAGTGNGI---LACGSYLLGAESVTAFDIDPDAIETAKRNC----GGVNFMVADVSEIS------------  105 (197)
T ss_dssp             TSSBTSEEEEETCTTCH---HHHHHHHTTBSEEEEEESCHHHHHHHHHHC----TTSEEEECCGGGCC------------
T ss_pred             CCCCCCEEEEeCCCCcH---HHHHHHHcCCCcccccccCHHHHHHHHHcc----ccccEEEEehhhcC------------
Confidence            35789999999998773   3344666775 6999999987665544433    36788889986432            


Q ss_pred             CCCccEEEEcCCC
Q 022103          105 FAALDILVNNAGV  117 (302)
Q Consensus       105 ~g~id~lv~~aG~  117 (302)
                       +++|+||.|.-.
T Consensus       106 -~~fD~Vi~NPPf  117 (197)
T d1ne2a_         106 -GKYDTWIMNPPF  117 (197)
T ss_dssp             -CCEEEEEECCCC
T ss_pred             -CcceEEEeCccc
Confidence             589999988643

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=92.31  E-value=0.13  Score=39.06  Aligned_cols=41  Identities=20%  Similarity=0.343  Sum_probs=34.3

Q ss_pred             EEEeCCCchHHHHHHHHHHHcC-CEEEEEecChhhHHHHHHHH
Q 022103           33 AIVTGANKGIGFALVKRLAELG-LTVILTARDVERGQRAVESL   74 (302)
Q Consensus        33 vlItGas~gIG~ala~~l~~~G-~~V~l~~r~~~~~~~~~~~l   74 (302)
                      +.+.|+ |-+|.++++.|.+.| ++|.+.+|++++.+...++.
T Consensus         3 I~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~   44 (152)
T d1yqga2           3 VYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKEL   44 (152)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHT
T ss_pred             EEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhc
Confidence            556676 789999999999887 89999999998887766653

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=92.23  E-value=0.097  Score=39.12  Aligned_cols=36  Identities=17%  Similarity=0.253  Sum_probs=31.9

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChh
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVE   65 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~   65 (302)
                      ++++++|.|| |.+|.++|..|++.|.+|.++.+...
T Consensus        34 ~~k~v~VIGg-G~iG~E~A~~l~~~g~~Vtvie~~~~   69 (133)
T d1q1ra2          34 ADNRLVVIGG-GYIGLEVAATAIKANMHVTLLDTAAR   69 (133)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             cCCEEEEECC-chHHHHHHHHHHhhCcceeeeeeccc
Confidence            4688999987 88999999999999999999998753

>d2fr1a2 c.2.1.2 (A:1448-1656) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=92.19  E-value=2  Score=33.53  Aligned_cols=142  Identities=9%  Similarity=-0.008  Sum_probs=79.8

Q ss_pred             ccCcEEEEeCC--CchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           28 SKETIAIVTGA--NKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        28 ~~~k~vlItGa--s~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      ..++.++|...  ......+++..|.+.|..++.+.-+..                       .+.+   .+.+.+ ...
T Consensus        23 ~~g~~lv~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~-----------------------~~~~---~l~~~~-~~~   75 (209)
T d2fr1a2          23 LDGTWLVAKYAGTADETSTAAREALESAGARVRELVVDAR-----------------------CGRD---ELAERL-RSV   75 (209)
T ss_dssp             CCSEEEEEECTTSSHHHHHHHHHHHHTTSCEEEEEECCTT-----------------------CCHH---HHHHHH-TTS
T ss_pred             CCCcEEEEeCCCCchHHHHHHHHHHHhCCCeEEEecCCCc-----------------------cCHH---HHHHHh-hcc
Confidence            45665555533  345778888888888988776654431                       1122   222222 334


Q ss_pred             CCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEecCCCcccccccCcccccccch
Q 022103          106 AALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNISSRLGTLSKVRNPNIKSILED  185 (302)
Q Consensus       106 g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vsS~~~~~~~~~~~~~~~~~~~  185 (302)
                      +.++.||+..+.........+      .....+...+.++|.+...   . ...++.+++..........          
T Consensus        76 ~~~~~vv~l~~~~~~~~~~~~------~~~~~~~~~l~l~qal~~~---~-~~~~l~~vT~~a~~~~~~d----------  135 (209)
T d2fr1a2          76 GEVAGVLSLLAVDEAEPEEAP------LALASLADTLSLVQAMVSA---E-LGCPLWTVTESAVATGPFE----------  135 (209)
T ss_dssp             CCCSEEEECTTTTCCCCSSCG------GGCHHHHHHHHHHHHHHHT---T-CCCCEEEEEESCSCSSTTS----------
T ss_pred             CCCCeEEEeCCCCCCCCcchh------HHHHHHHHHHHHHHHHHhC---C-CCCcEEEEEcCCcccCCCc----------
Confidence            678899998776433211111      1122345556666765432   2 3466777775433221111          


Q ss_pred             hhhcHHHHHHHHHHHHhhhccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHccCCCcEEEEe
Q 022103          186 EELSEEQIERFVGLFLQSVKDGTWKSQGWPEIWTDYAVSKLALNAYTMVLAKRYEGEGISVNSY  249 (302)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~V~~v  249 (302)
                                                       ..-....+++-+|+|+++.|+...-+++..+
T Consensus       136 ---------------------------------~~~~p~~A~l~Gl~r~~~~E~P~l~~~~vDl  166 (209)
T d2fr1a2         136 ---------------------------------RVRNAAHGALWGVGRVIALENPAVWGGLVDV  166 (209)
T ss_dssp             ---------------------------------CCSCGGGHHHHHHHHHHHHHCGGGEEEEEEE
T ss_pred             ---------------------------------ccCCHhHHhHHHHHHHHHHhCCCceEEEEEC
Confidence                                             1234567999999999999986644555544

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=91.88  E-value=0.54  Score=32.86  Aligned_cols=71  Identities=11%  Similarity=0.143  Sum_probs=44.9

Q ss_pred             CcEEEEeCCCchHH-HHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCc
Q 022103           30 ETIAIVTGANKGIG-FALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAAL  108 (302)
Q Consensus        30 ~k~vlItGas~gIG-~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~i  108 (302)
                      .|.+.+.|.+ |+| .++|+.|.++|++|...++.....-   +.+.+.|  +.++..+-.  +           .....
T Consensus         8 ~~~ihfiGig-G~GMs~LA~~L~~~G~~VsGSD~~~~~~~---~~L~~~G--i~v~~g~~~--~-----------~i~~~   68 (96)
T d1p3da1           8 VQQIHFIGIG-GAGMSGIAEILLNEGYQISGSDIADGVVT---QRLAQAG--AKIYIGHAE--E-----------HIEGA   68 (96)
T ss_dssp             CCEEEEETTT-STTHHHHHHHHHHHTCEEEEEESCCSHHH---HHHHHTT--CEEEESCCG--G-----------GGTTC
T ss_pred             CCEEEEEEEC-HHHHHHHHHHHHhCCCEEEEEeCCCChhh---hHHHHCC--CeEEECCcc--c-----------cCCCC
Confidence            4667777763 355 5679999999999999998753322   3333444  333332222  1           11367


Q ss_pred             cEEEEcCCCCC
Q 022103          109 DILVNNAGVSF  119 (302)
Q Consensus       109 d~lv~~aG~~~  119 (302)
                      |.+|...++..
T Consensus        69 d~vV~S~AI~~   79 (96)
T d1p3da1          69 SVVVVSSAIKD   79 (96)
T ss_dssp             SEEEECTTSCT
T ss_pred             CEEEECCCcCC
Confidence            99999999853

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=91.67  E-value=0.65  Score=38.57  Aligned_cols=38  Identities=18%  Similarity=0.220  Sum_probs=33.2

Q ss_pred             ccccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEec
Q 022103           24 TKWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTAR   62 (302)
Q Consensus        24 ~~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r   62 (302)
                      ...+++|++++|-|- |-+|..+|+.|.+.|++|+.++-
T Consensus        30 ~~~~l~g~~v~IQGf-GnVG~~~a~~L~e~GakvvavsD   67 (255)
T d1bgva1          30 ENDTLVGKTVALAGF-GNVAWGAAKKLAELGAKAVTLSG   67 (255)
T ss_dssp             TTCCSTTCEEEECCS-SHHHHHHHHHHHHHTCEEEEEEE
T ss_pred             CCCCCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEec
Confidence            356799999999995 77999999999999999988753

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=91.66  E-value=0.088  Score=43.82  Aligned_cols=36  Identities=22%  Similarity=0.235  Sum_probs=31.1

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecCh
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDV   64 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~   64 (302)
                      .+.|.|+|.|| |--|...|..|+++|++|+++.++.
T Consensus        28 ~~pkkV~IIGa-G~aGLsaA~~L~~~G~~V~vlE~~~   63 (370)
T d2iida1          28 SNPKHVVIVGA-GMAGLSAAYVLAGAGHQVTVLEASE   63 (370)
T ss_dssp             SSCCEEEEECC-BHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            34578999998 5679999999999999999999875

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=91.48  E-value=0.7  Score=35.89  Aligned_cols=75  Identities=21%  Similarity=0.242  Sum_probs=54.7

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCC--CceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKG--LPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      +|.+||=.|+++|   .++..|++.+.+|+.++.+++.++.+.+.+...+  .++.++.+|..+          ......
T Consensus        33 ~g~~VLDiGcGsG---~~s~~lA~~~~~V~avD~~~~~l~~a~~n~~~~gl~~~v~~~~gda~~----------~~~~~~   99 (186)
T d1l3ia_          33 KNDVAVDVGCGTG---GVTLELAGRVRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPE----------ALCKIP   99 (186)
T ss_dssp             TTCEEEEESCTTS---HHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHH----------HHTTSC
T ss_pred             CCCEEEEEECCeE---cccccccccceEEEEecCCHHHHHHHHHHHHHcCCCcceEEEECchhh----------cccccC
Confidence            5778888888766   3344556677899999999999998888887765  478888887421          122345


Q ss_pred             CccEEEEcCC
Q 022103          107 ALDILVNNAG  116 (302)
Q Consensus       107 ~id~lv~~aG  116 (302)
                      .+|.++.+.+
T Consensus       100 ~~D~v~~~~~  109 (186)
T d1l3ia_         100 DIDIAVVGGS  109 (186)
T ss_dssp             CEEEEEESCC
T ss_pred             CcCEEEEeCc
Confidence            8999987643

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.47  E-value=0.17  Score=40.99  Aligned_cols=78  Identities=12%  Similarity=0.101  Sum_probs=55.2

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhC------------------CCceeEEEeeCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEK------------------GLPVNFFQLDVS   89 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~------------------~~~~~~~~~Dlt   89 (302)
                      .++.+||..|++.|   ..+..|+++|++|+.++-+++-++.+.++....                  +..+.++.+|+.
T Consensus        44 ~~~~rvLd~GCG~G---~~a~~LA~~G~~V~gvD~S~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~  120 (229)
T d2bzga1          44 KSGLRVFFPLCGKA---VEMKWFADRGHSVVGVEISELGIQEFFTEQNLSYSEEPITEIPGTKVFKSSSGNISLYCCSIF  120 (229)
T ss_dssp             CCSCEEEETTCTTC---THHHHHHHTTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCGG
T ss_pred             CCCCEEEEeCCCCc---HHHHHHHhCCCcEEEEeCCHHHHHHHHHHhhccccccchhcccccceeeecCCcEEEEEcchh
Confidence            36789999999876   458888999999999999998877666654321                  345678888876


Q ss_pred             CHHHHHHHHHHHHhhCCCccEEEEcCCC
Q 022103           90 DPSSIEAFVSWFKSNFAALDILVNNAGV  117 (302)
Q Consensus        90 ~~~~~~~~~~~~~~~~g~id~lv~~aG~  117 (302)
                      +...         ...+.+|.++.....
T Consensus       121 ~l~~---------~~~~~fd~i~~~~~l  139 (229)
T d2bzga1         121 DLPR---------TNIGKFDMIWDRGAL  139 (229)
T ss_dssp             GGGG---------SCCCCEEEEEESSST
T ss_pred             hccc---------cccCceeEEEEEEEE
Confidence            5431         112467777665544

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=91.25  E-value=0.13  Score=40.72  Aligned_cols=39  Identities=18%  Similarity=0.129  Sum_probs=34.6

Q ss_pred             cccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecCh
Q 022103           25 KWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDV   64 (302)
Q Consensus        25 ~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~   64 (302)
                      ...+.++++.|.|. |.||+.+|+.+...|++|+..++..
T Consensus        39 ~~~l~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~   77 (188)
T d1sc6a1          39 SFEARGKKLGIIGY-GHIGTQLGILAESLGMYVYFYDIEN   77 (188)
T ss_dssp             CCCSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             cccccceEEEEeec-ccchhhhhhhcccccceEeeccccc
Confidence            45689999999977 7799999999999999999998865

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=91.08  E-value=0.22  Score=38.63  Aligned_cols=44  Identities=20%  Similarity=0.285  Sum_probs=38.7

Q ss_pred             ccccccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhh
Q 022103           22 SSTKWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVER   66 (302)
Q Consensus        22 ~~~~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~   66 (302)
                      ..+..-+.||+++|.|- |-+|+.+|++|...|++|+++..++-+
T Consensus        15 r~t~~~laGk~vvV~GY-G~vGrG~A~~~rg~Ga~V~V~E~DPi~   58 (163)
T d1v8ba1          15 RATDFLISGKIVVICGY-GDVGKGCASSMKGLGARVYITEIDPIC   58 (163)
T ss_dssp             HHHCCCCTTSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSCHHH
T ss_pred             HHhCceecCCEEEEecc-cccchhHHHHHHhCCCEEEEEecCchh
Confidence            34566789999999999 669999999999999999999999843

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=91.04  E-value=0.092  Score=43.27  Aligned_cols=31  Identities=29%  Similarity=0.254  Sum_probs=28.0

Q ss_pred             EEEeCCCchHHHHHHHHHHHcCCEEEEEecCh
Q 022103           33 AIVTGANKGIGFALVKRLAELGLTVILTARDV   64 (302)
Q Consensus        33 vlItGas~gIG~ala~~l~~~G~~V~l~~r~~   64 (302)
                      |+|.|| |-.|.++|..|+++|.+|+++++..
T Consensus         7 vvIIGa-Gi~Gls~A~~La~~G~~V~vlE~~~   37 (276)
T d1ryia1           7 AVVIGG-GIIGSAIAYYLAKENKNTALFESGT   37 (276)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            788887 7899999999999999999999864

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=91.00  E-value=0.19  Score=38.24  Aligned_cols=41  Identities=22%  Similarity=0.353  Sum_probs=34.3

Q ss_pred             EEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHH
Q 022103           33 AIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESL   74 (302)
Q Consensus        33 vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l   74 (302)
                      +.|.|+ |-+|.++++.|.+.|+++++.+|+.++.++..++.
T Consensus         3 Ig~IG~-G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~   43 (152)
T d2ahra2           3 IGIIGV-GKMASAIIKGLKQTPHELIISGSSLERSKEIAEQL   43 (152)
T ss_dssp             EEEECC-SHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHH
T ss_pred             EEEEec-cHHHHHHHHHHHhCCCeEEEEcChHHhHHhhcccc
Confidence            455555 77999999999999999999999998887776655

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=90.97  E-value=0.13  Score=38.98  Aligned_cols=35  Identities=17%  Similarity=0.168  Sum_probs=30.0

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcC--CEEEEEecCh
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELG--LTVILTARDV   64 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G--~~V~l~~r~~   64 (302)
                      .||+++|.|| |..|..+|..|.+.|  .+|+++.+++
T Consensus         1 ~gkrivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           1 AGRKVVVVGG-GTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCCcEEEECc-cHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            4899999999 678999999999987  4788887764

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=90.53  E-value=0.57  Score=36.93  Aligned_cols=45  Identities=16%  Similarity=0.169  Sum_probs=37.2

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHH
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVES   73 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~   73 (302)
                      .+.-.|+|.|+ |-.|++-++.....|++|.+++.+.++++++...
T Consensus        27 V~pa~VvViGa-GvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~l   71 (183)
T d1l7da1          27 VPPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVESL   71 (183)
T ss_dssp             ECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHT
T ss_pred             cCCcEEEEEcC-cHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHh
Confidence            34457999998 6699999999999999999999999887765543

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=90.33  E-value=0.54  Score=37.99  Aligned_cols=79  Identities=22%  Similarity=0.182  Sum_probs=60.6

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCC-CceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKG-LPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      -+|.+||..|+++|--.++...|+  |.+|+.+.++.+-.+...+.+.+.+ ..+.++..|..+.-          ...+
T Consensus        77 ~~g~~VLeIGsGsGY~taila~l~--g~~V~~ie~~~~l~~~a~~~l~~~g~~nv~~~~gd~~~g~----------~~~~  144 (215)
T d1jg1a_          77 KPGMNILEVGTGSGWNAALISEIV--KTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKGF----------PPKA  144 (215)
T ss_dssp             CTTCCEEEECCTTSHHHHHHHHHH--CSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCC----------GGGC
T ss_pred             CccceEEEecCCCChhHHHHHHhh--CceeEEEeccHHHHHHHHHHHHHcCCceeEEEECccccCC----------cccC
Confidence            346799999999888888877776  4679999999877777777777665 57889999886421          1226


Q ss_pred             CccEEEEcCCCC
Q 022103          107 ALDILVNNAGVS  118 (302)
Q Consensus       107 ~id~lv~~aG~~  118 (302)
                      ++|.++.+++..
T Consensus       145 pfD~Iiv~~a~~  156 (215)
T d1jg1a_         145 PYDVIIVTAGAP  156 (215)
T ss_dssp             CEEEEEECSBBS
T ss_pred             cceeEEeecccc
Confidence            899999988874

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=90.09  E-value=0.31  Score=37.92  Aligned_cols=74  Identities=26%  Similarity=0.282  Sum_probs=43.0

Q ss_pred             EEEEeCCCchHHH--HHHHHHHHc----CCEEEEEecChhhHHHHHHHHhh----CCCceeEEEeeCCCHHHHHHHHHHH
Q 022103           32 IAIVTGANKGIGF--ALVKRLAEL----GLTVILTARDVERGQRAVESLSE----KGLPVNFFQLDVSDPSSIEAFVSWF  101 (302)
Q Consensus        32 ~vlItGas~gIG~--ala~~l~~~----G~~V~l~~r~~~~~~~~~~~l~~----~~~~~~~~~~Dlt~~~~~~~~~~~~  101 (302)
                      .+.|.|| |.+|.  ++...|+..    +.++++++.+.++++.....+.+    .+....+..  .+|.++   .+   
T Consensus         4 KI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~~--~td~~e---aL---   74 (171)
T d1obba1           4 KIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEK--TMNLDD---VI---   74 (171)
T ss_dssp             EEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEE--ESCHHH---HH---
T ss_pred             EEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEEE--eCChhh---cc---
Confidence            4667776 44554  455555543    45899999999887654443332    233333322  233322   22   


Q ss_pred             HhhCCCccEEEEcCCCC
Q 022103          102 KSNFAALDILVNNAGVS  118 (302)
Q Consensus       102 ~~~~g~id~lv~~aG~~  118 (302)
                          ...|+++++++..
T Consensus        75 ----~dad~Vv~~~~~g   87 (171)
T d1obba1          75 ----IDADFVINTAMVG   87 (171)
T ss_dssp             ----TTCSEEEECCCTT
T ss_pred             ----cCCCeEeeecccc
Confidence                3689999998874

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=90.05  E-value=0.65  Score=37.20  Aligned_cols=80  Identities=19%  Similarity=0.169  Sum_probs=55.9

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCC-CceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKG-LPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      +|.+||-.|+++|--.++...+.....+|+.++.+++..+.+.+.+...+ ..+.++..|..+.-          ...+.
T Consensus        75 ~g~~VLdiG~GtG~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~~d~~~~~----------~~~~~  144 (213)
T d1dl5a1          75 KGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGV----------PEFSP  144 (213)
T ss_dssp             TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCC----------GGGCC
T ss_pred             ccceEEEecCccchhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhcccccccccCchHHcc----------ccccc
Confidence            47799999988776555554555455699999999998888888877654 35666666654311          11257


Q ss_pred             ccEEEEcCCCC
Q 022103          108 LDILVNNAGVS  118 (302)
Q Consensus       108 id~lv~~aG~~  118 (302)
                      +|.++.+++..
T Consensus       145 fD~I~~~~~~~  155 (213)
T d1dl5a1         145 YDVIFVTVGVD  155 (213)
T ss_dssp             EEEEEECSBBS
T ss_pred             hhhhhhhccHH
Confidence            99999988763

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=90.01  E-value=0.19  Score=39.48  Aligned_cols=80  Identities=15%  Similarity=0.081  Sum_probs=53.4

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCce---eEEEeeC--CCHHHHHHHHHH
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPV---NFFQLDV--SDPSSIEAFVSW  100 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~---~~~~~Dl--t~~~~~~~~~~~  100 (302)
                      .+++||.++|.|-|.=+|+-+|..|+++|+.|..+..+.....       ..+..+   .....|+  -..+.+++... 
T Consensus        25 ~~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~lk~~~~-   96 (171)
T d1edza1          25 NRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKF-------TRGESLKLNKHHVEDLGEYSEDLLKKCSL-   96 (171)
T ss_dssp             CTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEE-------ESCCCSSCCCCEEEEEEECCHHHHHHHHH-
T ss_pred             CCCCCCEEEEECCccccHHHHHHHHHHCCCEEEEecccccccc-------ccccceeeeeeccccccccchhHHhhccc-
Confidence            3799999999999999999999999999999988765431100       001111   1122222  23455655555 


Q ss_pred             HHhhCCCccEEEEcCCCCC
Q 022103          101 FKSNFAALDILVNNAGVSF  119 (302)
Q Consensus       101 ~~~~~g~id~lv~~aG~~~  119 (302)
                            ..|++|..+|...
T Consensus        97 ------~aDIvIsavG~p~  109 (171)
T d1edza1          97 ------DSDVVITGVPSEN  109 (171)
T ss_dssp             ------HCSEEEECCCCTT
T ss_pred             ------cCCEEEEccCCCc
Confidence                  4699999988743

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=89.87  E-value=4.9  Score=33.81  Aligned_cols=80  Identities=18%  Similarity=0.109  Sum_probs=56.5

Q ss_pred             ccCcEEEEeCCC-chHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCC-CceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           28 SKETIAIVTGAN-KGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKG-LPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        28 ~~~k~vlItGas-~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      .+|++||=.++. |+++.+    ++..+.+|+.++.+...++.+.+.+...+ ..+.++..|..+.      .+......
T Consensus       144 ~~g~rVLDl~~gtG~~s~~----~a~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~~i~~d~~~~------~~~~~~~~  213 (318)
T d1wxxa2         144 FRGERALDVFSYAGGFALH----LALGFREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDL------LRRLEKEG  213 (318)
T ss_dssp             CCEEEEEEETCTTTHHHHH----HHHHEEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHH------HHHHHHTT
T ss_pred             hCCCeeeccCCCCcHHHHH----HHhcCCcEEeecchHHHHHHHHHHHHHcCCCCcceeeccHHHH------hhhhHhhh
Confidence            578899877775 555544    34456799999999999888888777665 3577887776443      23333344


Q ss_pred             CCccEEEEcCCC
Q 022103          106 AALDILVNNAGV  117 (302)
Q Consensus       106 g~id~lv~~aG~  117 (302)
                      .++|.|+.+...
T Consensus       214 ~~fD~Vi~DpP~  225 (318)
T d1wxxa2         214 ERFDLVVLDPPA  225 (318)
T ss_dssp             CCEEEEEECCCC
T ss_pred             cCCCEEEEcCCc
Confidence            689999998754

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=89.84  E-value=0.18  Score=40.85  Aligned_cols=37  Identities=27%  Similarity=0.268  Sum_probs=32.3

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecCh
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDV   64 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~   64 (302)
                      ..++|.++|.|| |.-|...|..|+++|++|+++.++.
T Consensus        46 ~~~~k~VvIIGa-GpAGl~aA~~l~~~G~~v~l~E~~~   82 (233)
T d1djqa3          46 TKNKDSVLIVGA-GPSGSEAARVLMESGYTVHLTDTAE   82 (233)
T ss_dssp             CSSCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             ccCCceEEEEcc-cHHHHHHHHHHHHhccceeeEeecc
Confidence            356789999998 6689999999999999999998864

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=89.72  E-value=1.1  Score=33.42  Aligned_cols=87  Identities=13%  Similarity=0.040  Sum_probs=54.9

Q ss_pred             cCcEEEEeCCC---chHHHHHHHHHHHcCCEEEEEecChhhHH--HHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHh
Q 022103           29 KETIAIVTGAN---KGIGFALVKRLAELGLTVILTARDVERGQ--RAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKS  103 (302)
Q Consensus        29 ~~k~vlItGas---~gIG~ala~~l~~~G~~V~l~~r~~~~~~--~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~  103 (302)
                      +-|++.|.|++   +..|..+++.|.+.|++|+.+....+...  .+...+.+-...+... .=+...+.+.++++++.+
T Consensus        18 ~~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~~i~G~~~~~sl~dlp~~iD~v-~i~vp~~~~~~~~~e~~~   96 (139)
T d2d59a1          18 RYKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEEVLGRKCYPSVLDIPDKIEVV-DLFVKPKLTMEYVEQAIK   96 (139)
T ss_dssp             HCCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGCSSCCSEE-EECSCHHHHHHHHHHHHH
T ss_pred             cCCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCcccccCCCcccccccccCccceEE-EEEeCHHHHHHHHHHHHH
Confidence            56899999998   68999999999999999998866532211  0001111111111111 112356777888888877


Q ss_pred             hCCCccEEEEcCCCC
Q 022103          104 NFAALDILVNNAGVS  118 (302)
Q Consensus       104 ~~g~id~lv~~aG~~  118 (302)
                      .  .+..++...|..
T Consensus        97 ~--g~k~v~~~~G~~  109 (139)
T d2d59a1          97 K--GAKVVWFQYNTY  109 (139)
T ss_dssp             H--TCSEEEECTTCC
T ss_pred             h--CCCEEEEecccc
Confidence            5  467788877763

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=89.65  E-value=0.15  Score=40.03  Aligned_cols=31  Identities=23%  Similarity=0.135  Sum_probs=27.6

Q ss_pred             EEEeCCCchHHHHHHHHHHHcCCEEEEEecCh
Q 022103           33 AIVTGANKGIGFALVKRLAELGLTVILTARDV   64 (302)
Q Consensus        33 vlItGas~gIG~ala~~l~~~G~~V~l~~r~~   64 (302)
                      |+|.|| |--|...|..|+++|.+|+++.++.
T Consensus         8 viViGa-G~~Gl~~A~~La~~G~~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLGT-GITECILSGLLSVDGKKVLHIDKQD   38 (297)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCCEEEEcCCC
Confidence            788886 7789999999999999999999864

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.43  E-value=0.65  Score=39.25  Aligned_cols=75  Identities=13%  Similarity=0.196  Sum_probs=52.5

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHhhC--CCceeEEEeeCCCHHHHHHHHHHHHh
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAELGL-TVILTARDVERGQRAVESLSEK--GLPVNFFQLDVSDPSSIEAFVSWFKS  103 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dlt~~~~~~~~~~~~~~  103 (302)
                      ..++++||-.|++.|+   ++..+++.|+ +|++++.++.- ..+.+...+.  ..++.++..|+.+...          
T Consensus        33 ~~~~~~VLDiGcG~G~---lsl~aa~~Ga~~V~aid~s~~~-~~a~~~~~~~~~~~~i~~~~~~~~~l~~----------   98 (311)
T d2fyta1          33 IFKDKVVLDVGCGTGI---LSMFAAKAGAKKVLGVDQSEIL-YQAMDIIRLNKLEDTITLIKGKIEEVHL----------   98 (311)
T ss_dssp             GTTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEESSTHH-HHHHHHHHHTTCTTTEEEEESCTTTSCC----------
T ss_pred             cCCcCEEEEECCCCCH---HHHHHHHcCCCEEEEEeCHHHH-HHHHHHHHHhCCCccceEEEeeHHHhcC----------
Confidence            3689999999998876   5667788886 79999988753 3333333333  3578899988877531          


Q ss_pred             hCCCccEEEEcC
Q 022103          104 NFAALDILVNNA  115 (302)
Q Consensus       104 ~~g~id~lv~~a  115 (302)
                      ...++|+|+...
T Consensus        99 ~~~~~D~Ivse~  110 (311)
T d2fyta1          99 PVEKVDVIISEW  110 (311)
T ss_dssp             SCSCEEEEEECC
T ss_pred             ccccceEEEEee
Confidence            124789998753

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=89.11  E-value=0.27  Score=37.16  Aligned_cols=37  Identities=16%  Similarity=0.173  Sum_probs=29.5

Q ss_pred             EEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH
Q 022103           33 AIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRA   70 (302)
Q Consensus        33 vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~   70 (302)
                      +-|.|. |-+|.++|+.|+++|++|+..+++..+....
T Consensus         3 IgiIG~-G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~   39 (152)
T d1i36a2           3 VGFIGF-GEVAQTLASRLRSRGVEVVTSLEGRSPSTIE   39 (152)
T ss_dssp             EEEESC-SHHHHHHHHHHHHTTCEEEECCTTCCHHHHH
T ss_pred             EEEEcH-HHHHHHHHHHHHHCCCeEEEEcCchhHHHHH
Confidence            445555 8899999999999999999988877655433

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=89.07  E-value=0.21  Score=42.66  Aligned_cols=36  Identities=25%  Similarity=0.278  Sum_probs=30.6

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChh
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVE   65 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~   65 (302)
                      +.|.++|.|| |--|..+|..|+++|++|+++.++..
T Consensus         1 k~KKI~IIGa-G~sGL~aA~~L~k~G~~V~viEk~~~   36 (314)
T d2bi7a1           1 KSKKILIVGA-GFSGAVIGRQLAEKGHQVHIIDQRDH   36 (314)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHhCCCCEEEEECCCC
Confidence            3578999998 66788899999999999999988763

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=89.00  E-value=0.15  Score=42.63  Aligned_cols=32  Identities=19%  Similarity=0.301  Sum_probs=27.7

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCC-EEEEEecCh
Q 022103           32 IAIVTGANKGIGFALVKRLAELGL-TVILTARDV   64 (302)
Q Consensus        32 ~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~~   64 (302)
                      .|+|.|| |-+|.++|..|+++|. +|++++|+.
T Consensus         3 dViIIGa-Gi~G~s~A~~La~~G~~~V~liE~~~   35 (305)
T d1pj5a2           3 RIVIIGA-GIVGTNLADELVTRGWNNITVLDQGP   35 (305)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence            4888888 6799999999999996 599998863

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=88.98  E-value=1  Score=35.09  Aligned_cols=76  Identities=13%  Similarity=0.077  Sum_probs=55.7

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCC-ceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGL-PVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      +++.+||=.|++.|.   .+..|+++|++|+.++-++.-++.+.+...+.+. .+.+...|+.+..-           -+
T Consensus        29 ~~~grvLDiGcG~G~---~~~~la~~g~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~d~~~~~~-----------~~   94 (198)
T d2i6ga1          29 VAPGRTLDLGCGNGR---NSLYLAANGYDVTAWDKNPASMANLERIKAAEGLDNLQTDLVDLNTLTF-----------DG   94 (198)
T ss_dssp             SCSCEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCTTEEEEECCTTTCCC-----------CC
T ss_pred             CCCCcEEEECCCCCH---HHHHHHHHhhhhccccCcHHHHHHHHHHhhhccccchhhhheecccccc-----------cc
Confidence            455689999986553   5668888999999999999888887777666553 46777788775431           14


Q ss_pred             CccEEEEcCCC
Q 022103          107 ALDILVNNAGV  117 (302)
Q Consensus       107 ~id~lv~~aG~  117 (302)
                      .+|.|+.+.-+
T Consensus        95 ~fD~I~~~~~~  105 (198)
T d2i6ga1          95 EYDFILSTVVM  105 (198)
T ss_dssp             CEEEEEEESCG
T ss_pred             cccEEEEeeee
Confidence            78999876644

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=88.88  E-value=1.6  Score=33.09  Aligned_cols=49  Identities=16%  Similarity=0.129  Sum_probs=34.0

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHc--CCEEEEEecChhhHHHHHHHHhhCCCc
Q 022103           31 TIAIVTGANKGIGFALVKRLAEL--GLTVILTARDVERGQRAVESLSEKGLP   80 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~--G~~V~l~~r~~~~~~~~~~~l~~~~~~   80 (302)
                      |++.|-|+||.||.....-+.+.  .++|+++.-.. ..+...+++.+..++
T Consensus         2 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~-N~~~L~~q~~~f~pk   52 (151)
T d1q0qa2           2 KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGK-NVTRMVEQCLEFSPR   52 (151)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESS-CHHHHHHHHHHHCCS
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecC-cHHHHHHHHHHHhhc
Confidence            57999999999999999999887  47776654322 234445555554444

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=88.81  E-value=0.78  Score=31.61  Aligned_cols=68  Identities=18%  Similarity=0.193  Sum_probs=44.5

Q ss_pred             EEEeCCCchHHH-HHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCccEE
Q 022103           33 AIVTGANKGIGF-ALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDIL  111 (302)
Q Consensus        33 vlItGas~gIG~-ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id~l  111 (302)
                      +-+.|. +|+|- ++|+.|.++|+.|...++.....   .++|++.|-++. ...|..+.              ..+|.|
T Consensus         4 ihfiGI-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~---t~~L~~~Gi~i~-~gh~~~~i--------------~~~d~v   64 (89)
T d1j6ua1           4 IHFVGI-GGIGMSAVALHEFSNGNDVYGSNIEETER---TAYLRKLGIPIF-VPHSADNW--------------YDPDLV   64 (89)
T ss_dssp             EEEETT-TSHHHHHHHHHHHHTTCEEEEECSSCCHH---HHHHHHTTCCEE-SSCCTTSC--------------CCCSEE
T ss_pred             EEEEeE-CHHHHHHHHHHHHhCCCeEEEEeCCCChh---HHHHHHCCCeEE-eeeccccc--------------CCCCEE
Confidence            555565 55665 78999999999999999886432   334666554332 12232222              368999


Q ss_pred             EEcCCCCC
Q 022103          112 VNNAGVSF  119 (302)
Q Consensus       112 v~~aG~~~  119 (302)
                      |...++..
T Consensus        65 V~SsAI~~   72 (89)
T d1j6ua1          65 IKTPAVRD   72 (89)
T ss_dssp             EECTTCCT
T ss_pred             EEecCcCC
Confidence            99999853

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=88.19  E-value=3.5  Score=34.86  Aligned_cols=115  Identities=12%  Similarity=0.027  Sum_probs=70.5

Q ss_pred             cCcEEEEeCCC-chHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHhhCC--CceeEEEeeCCCHHHHHHHHHHHHhh
Q 022103           29 KETIAIVTGAN-KGIGFALVKRLAELGL-TVILTARDVERGQRAVESLSEKG--LPVNFFQLDVSDPSSIEAFVSWFKSN  104 (302)
Q Consensus        29 ~~k~vlItGas-~gIG~ala~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dlt~~~~~~~~~~~~~~~  104 (302)
                      +|++||=.++. |+++.+++    ..|+ +|+.++.+.+.++.+.+.+...|  .++.++..|+.+      +.......
T Consensus       145 ~g~~VLDl~~g~G~~si~~a----~~ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~~~d~~~------~~~~~~~~  214 (324)
T d2as0a2         145 PGDRVLDVFTYTGGFAIHAA----IAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFE------EMEKLQKK  214 (324)
T ss_dssp             TTCEEEETTCTTTHHHHHHH----HTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHH------HHHHHHHT
T ss_pred             CCCeeecccCcccchhhhhh----hcCCcEEEeecCCHHHHHHHHHHHHHcCCCccceeeechhhh------hhHHHHhc
Confidence            48888888775 66665543    4565 79999999998888887776555  356777776542      23334444


Q ss_pred             CCCccEEEEcCCCCCCCCCCCCHHHHHHHHHhhhhHHHHHHHHHhhhhhcCCCCCcEEEec
Q 022103          105 FAALDILVNNAGVSFNDIYKNTVEHAETVIRTNFYGAKLLTESLLPLFRRSPSKSRILNIS  165 (302)
Q Consensus       105 ~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~vn~~~~~~l~~~~~~~l~~~~~~~~iv~vs  165 (302)
                      ..++|+||.+......     ...+....    ......+++.+++.++.   .|.+++.+
T Consensus       215 ~~~fD~Vi~DpP~~~~-----~~~~~~~~----~~~y~~l~~~a~~ll~p---GG~lv~~s  263 (324)
T d2as0a2         215 GEKFDIVVLDPPAFVQ-----HEKDLKAG----LRAYFNVNFAGLNLVKD---GGILVTCS  263 (324)
T ss_dssp             TCCEEEEEECCCCSCS-----SGGGHHHH----HHHHHHHHHHHHTTEEE---EEEEEEEE
T ss_pred             cCCCCchhcCCccccC-----CHHHHHHH----HHHHHHHHHHHHHHcCC---CcEEEEEe
Confidence            4689999988754322     11122111    22334466777776653   35555543

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=88.14  E-value=0.7  Score=35.17  Aligned_cols=53  Identities=13%  Similarity=0.131  Sum_probs=37.5

Q ss_pred             CcEEEEeCCCchHHHHHHHHHHHc--CCEEEEEecChhhHHHHHHHHhhCCCceeE
Q 022103           30 ETIAIVTGANKGIGFALVKRLAEL--GLTVILTARDVERGQRAVESLSEKGLPVNF   83 (302)
Q Consensus        30 ~k~vlItGas~gIG~ala~~l~~~--G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~   83 (302)
                      .|++.|-|+||.||.....-+.+.  .++|+++.-.. ..+...+++.+..++..+
T Consensus         2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~-N~~~L~~q~~ef~Pk~v~   56 (150)
T d1r0ka2           2 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANR-NVKDLADAAKRTNAKRAV   56 (150)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESS-CHHHHHHHHHHTTCSEEE
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCC-CHHHHHHHHHhhccccce
Confidence            489999999999999999999886  57876654332 334555566666555443

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=88.04  E-value=0.22  Score=41.08  Aligned_cols=30  Identities=33%  Similarity=0.442  Sum_probs=26.9

Q ss_pred             EEEeCCCchHHHHHHHHHHHcCCEEEEEecC
Q 022103           33 AIVTGANKGIGFALVKRLAELGLTVILTARD   63 (302)
Q Consensus        33 vlItGas~gIG~ala~~l~~~G~~V~l~~r~   63 (302)
                      |+|.|| |-.|..+|..|+++|++|+++++.
T Consensus         6 vvIIGa-Gi~Gls~A~~La~~G~~V~viE~~   35 (281)
T d2gf3a1           6 VIVVGA-GSMGMAAGYQLAKQGVKTLLVDAF   35 (281)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCC
Confidence            678887 778999999999999999999874

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.79  E-value=0.88  Score=36.72  Aligned_cols=80  Identities=19%  Similarity=0.070  Sum_probs=59.9

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCC------CceeEEEeeCCCHHHHHHHHHHHH
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKG------LPVNFFQLDVSDPSSIEAFVSWFK  102 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~------~~~~~~~~Dlt~~~~~~~~~~~~~  102 (302)
                      +|.+||-.|+++|.-.++..++.....+|+.++++++-.+.+.+.+.+.+      ..+.+...|..+.-          
T Consensus        76 ~g~~VLdiG~GsGy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~gD~~~~~----------  145 (224)
T d1i1na_          76 EGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGY----------  145 (224)
T ss_dssp             TTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCC----------
T ss_pred             CCCeEEEecCCCCHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEEEEeeccccc----------
Confidence            57799999999998888877788777899999999988887777765432      35667777764211          


Q ss_pred             hhCCCccEEEEcCCCC
Q 022103          103 SNFAALDILVNNAGVS  118 (302)
Q Consensus       103 ~~~g~id~lv~~aG~~  118 (302)
                      ...+.+|.++.+++..
T Consensus       146 ~~~~~fD~I~~~~~~~  161 (224)
T d1i1na_         146 AEEAPYDAIHVGAAAP  161 (224)
T ss_dssp             GGGCCEEEEEECSBBS
T ss_pred             chhhhhhhhhhhcchh
Confidence            1125799999998764

>d1nv8a_ c.66.1.30 (A:) N5-glutamine methyltransferase, HemK {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Thermotoga maritima [TaxId: 2336]

Probab=87.77  E-value=1.9  Score=35.92  Aligned_cols=75  Identities=20%  Similarity=0.266  Sum_probs=51.5

Q ss_pred             CcEEEEeCCCch-HHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCC--CceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           30 ETIAIVTGANKG-IGFALVKRLAELGLTVILTARDVERGQRAVESLSEKG--LPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        30 ~k~vlItGas~g-IG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      .++++-.|+++| |+.++++   ....+|++++.+++.++-+.+.....+  .++.++..|+.+.         ....++
T Consensus       111 ~~~vld~g~GsG~i~~~la~---~~~~~v~a~Dis~~Al~~A~~Na~~~~~~~~~~i~~~~~~~~---------~~~~~~  178 (271)
T d1nv8a_         111 IKTVADIGTGSGAIGVSVAK---FSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEP---------FKEKFA  178 (271)
T ss_dssp             CCEEEEESCTTSHHHHHHHH---HSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGG---------GGGGTT
T ss_pred             ccEEEEeeeeeehhhhhhhh---cccceeeechhhhhHHHHHHHHHHHcCCCceeEEeecccccc---------cccccC
Confidence            345665555555 5555442   246899999999998888888776654  3567777887643         233457


Q ss_pred             CccEEEEcCC
Q 022103          107 ALDILVNNAG  116 (302)
Q Consensus       107 ~id~lv~~aG  116 (302)
                      ++|+||.|.-
T Consensus       179 ~fDlIVsNPP  188 (271)
T d1nv8a_         179 SIEMILSNPP  188 (271)
T ss_dssp             TCCEEEECCC
T ss_pred             cccEEEEccc
Confidence            8999999975

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.70  E-value=0.25  Score=45.60  Aligned_cols=34  Identities=15%  Similarity=0.232  Sum_probs=29.4

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCC-EEEEEec
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGL-TVILTAR   62 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r   62 (302)
                      +.+.+|+|.|+ ||+|.++++.|+..|. ++++++.
T Consensus        23 L~~s~VlvvG~-gglG~Ei~knLvl~GVg~itivD~   57 (529)
T d1yova1          23 LESAHVCLINA-TATGTEILKNLVLPGIGSFTIIDG   57 (529)
T ss_dssp             HHHCEEEECCC-SHHHHHHHHHHHTTTCSEEEEECC
T ss_pred             HhCCCEEEECC-CHHHHHHHHHHHHhcCCEEEEEcC
Confidence            56778999997 7899999999999996 6888765

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=87.56  E-value=0.94  Score=32.26  Aligned_cols=34  Identities=21%  Similarity=0.161  Sum_probs=28.0

Q ss_pred             CcEEEEeCCCchHHHHHHHHHHHc---CCEEEEEecCh
Q 022103           30 ETIAIVTGANKGIGFALVKRLAEL---GLTVILTARDV   64 (302)
Q Consensus        30 ~k~vlItGas~gIG~ala~~l~~~---G~~V~l~~r~~   64 (302)
                      .+.++|.|| |.+|.++|..|++.   |.+|.++.|.+
T Consensus        18 p~~v~IiGg-G~ig~E~A~~l~~~~~~g~~Vtli~~~~   54 (117)
T d1feca2          18 PKRALCVGG-GYISIEFAGIFNAYKARGGQVDLAYRGD   54 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHSCTTCEEEEEESSS
T ss_pred             CCeEEEECC-ChHHHHHHHHhHhhcccccccceecccc
Confidence            478899988 78999999876654   88999998864

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=87.55  E-value=0.79  Score=32.84  Aligned_cols=34  Identities=15%  Similarity=0.082  Sum_probs=27.3

Q ss_pred             CcEEEEeCCCchHHHHHHHHHHHc---CCEEEEEecCh
Q 022103           30 ETIAIVTGANKGIGFALVKRLAEL---GLTVILTARDV   64 (302)
Q Consensus        30 ~k~vlItGas~gIG~ala~~l~~~---G~~V~l~~r~~   64 (302)
                      .+.++|.|| |.+|.++|..|.+.   |.+|.++.|..
T Consensus        20 p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~   56 (117)
T d1aoga2          20 PRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGE   56 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSS
T ss_pred             CCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccc
Confidence            468889988 88999999776654   56799998864

>d1krwa_ c.23.1.1 (A:) NTRC receiver domain {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: NTRC receiver domain
species: Salmonella typhimurium [TaxId: 90371]

Probab=87.54  E-value=2.2  Score=30.57  Aligned_cols=83  Identities=19%  Similarity=0.263  Sum_probs=55.9

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      |+.+++||.--...+...+.+.|.+.|++|..+....    ++.+.+.+....+.+....+-+.+.+ ++++++++....
T Consensus         1 M~k~~ILIVDDd~~~~~~l~~~L~~~g~~v~~a~~~~----~a~~~l~~~~~dlii~D~~mp~~~G~-el~~~l~~~~~~   75 (123)
T d1krwa_           1 MQRGIVWVVDDDSSIRWVLERALAGAGLTCTTFENGN----EVLAALASKTPDVLLSDIRMPGMDGL-ALLKQIKQRHPM   75 (123)
T ss_dssp             CCCCEEEEESSSHHHHHHHHHHHHHTTCEEEEESSSH----HHHHHHTTCCCSEEEECCSSSSSTTH-HHHHHHHHHSSS
T ss_pred             CCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEeCCHH----HHHHHHHhCCCCEEEehhhcCCchHH-HHHHHHHHhCCC
Confidence            4567899999999999999999999999998765544    33444544444455444444455444 356777777666


Q ss_pred             ccEEEEcC
Q 022103          108 LDILVNNA  115 (302)
Q Consensus       108 id~lv~~a  115 (302)
                      +-+++..+
T Consensus        76 ~piI~~t~   83 (123)
T d1krwa_          76 LPVIIMTA   83 (123)
T ss_dssp             CCEEESCC
T ss_pred             CeEEEEec
Confidence            66665444

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=87.42  E-value=1  Score=36.53  Aligned_cols=76  Identities=18%  Similarity=0.001  Sum_probs=53.8

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      -+|.+||-.|+++|.-.+   .|++.+.+|+.++++++-.+.+.+.+.. ...+.++..|....-          ...++
T Consensus        69 ~~g~~VLdIG~GsGy~ta---~La~l~~~V~aiE~~~~~~~~A~~~~~~-~~nv~~~~~d~~~g~----------~~~~p  134 (224)
T d1vbfa_          69 HKGQKVLEIGTGIGYYTA---LIAEIVDKVVSVEINEKMYNYASKLLSY-YNNIKLILGDGTLGY----------EEEKP  134 (224)
T ss_dssp             CTTCEEEEECCTTSHHHH---HHHHHSSEEEEEESCHHHHHHHHHHHTT-CSSEEEEESCGGGCC----------GGGCC
T ss_pred             cccceEEEecCCCCHHHH---HHHHHhcccccccccHHHHHHHHHHHhc-ccccccccCchhhcc----------hhhhh
Confidence            357789999998885443   4555667999999998777766655543 357888888875310          11257


Q ss_pred             ccEEEEcCCC
Q 022103          108 LDILVNNAGV  117 (302)
Q Consensus       108 id~lv~~aG~  117 (302)
                      +|.++.+++.
T Consensus       135 fD~Iiv~~a~  144 (224)
T d1vbfa_         135 YDRVVVWATA  144 (224)
T ss_dssp             EEEEEESSBB
T ss_pred             HHHHHhhcch
Confidence            9999988876

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=87.30  E-value=0.24  Score=40.99  Aligned_cols=33  Identities=21%  Similarity=0.324  Sum_probs=29.3

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCEEEEEecChh
Q 022103           32 IAIVTGANKGIGFALVKRLAELGLTVILTARDVE   65 (302)
Q Consensus        32 ~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~   65 (302)
                      .|+|.|| |-.|+.+|..|+++|++|+++.|.++
T Consensus         4 ~V~IvGa-Gp~Gl~~A~~L~~~G~~v~vlE~~~~   36 (292)
T d1k0ia1           4 QVAIIGA-GPSGLLLGQLLHKAGIDNVILERQTP   36 (292)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            4788888 58999999999999999999999864

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=87.16  E-value=1.3  Score=33.16  Aligned_cols=83  Identities=12%  Similarity=0.123  Sum_probs=54.5

Q ss_pred             EEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCC------CceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           33 AIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKG------LPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        33 vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~------~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      +-+.|- |-+|..+|++|++.|+.+ ...|+.++.+...++.....      .....+...+.+.+.+....+.+.....
T Consensus         3 Ig~IGl-G~MG~~ma~~L~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~l~~~~~   80 (156)
T d2cvza2           3 VAFIGL-GAMGYPMAGHLARRFPTL-VWNRTFEKALRHQEEFGSEAVPLERVAEARVIFTCLPTTREVYEVAEALYPYLR   80 (156)
T ss_dssp             EEEECC-STTHHHHHHHHHTTSCEE-EECSSTHHHHHHHHHHCCEECCGGGGGGCSEEEECCSSHHHHHHHHHHHTTTCC
T ss_pred             EEEEeH-HHHHHHHHHHHHhCCCEE-EEeCCHHHHHHHHHHcCCcccccccccceeEEEecccchhhhhhhhcccccccc
Confidence            456666 779999999999988765 57888877776666543210      1233444556677778888887766555


Q ss_pred             CccEEEEcCCC
Q 022103          107 ALDILVNNAGV  117 (302)
Q Consensus       107 ~id~lv~~aG~  117 (302)
                      +-.+++.++-.
T Consensus        81 ~~~~iid~sT~   91 (156)
T d2cvza2          81 EGTYWVDATSG   91 (156)
T ss_dssp             TTEEEEECSCC
T ss_pred             ccccccccccC
Confidence            55555555543

>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Dethiobiotin synthetase
species: Escherichia coli [TaxId: 562]

Probab=86.98  E-value=0.18  Score=39.77  Aligned_cols=31  Identities=23%  Similarity=0.246  Sum_probs=27.5

Q ss_pred             cEEEEeCCCchHHH-----HHHHHHHHcCCEEEEEe
Q 022103           31 TIAIVTGANKGIGF-----ALVKRLAELGLTVILTA   61 (302)
Q Consensus        31 k~vlItGas~gIG~-----ala~~l~~~G~~V~l~~   61 (302)
                      |++.|||.+.|+|+     .+|+.|+++|++|++++
T Consensus         2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id   37 (224)
T d1byia_           2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYK   37 (224)
T ss_dssp             EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred             ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEC
Confidence            78999999989987     57889999999999986

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=86.93  E-value=0.25  Score=38.75  Aligned_cols=32  Identities=31%  Similarity=0.446  Sum_probs=27.3

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCC-EEEEEecCh
Q 022103           32 IAIVTGANKGIGFALVKRLAELGL-TVILTARDV   64 (302)
Q Consensus        32 ~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~~   64 (302)
                      .|+|.|| |--|...|..|+++|+ +|+++.++.
T Consensus         2 ~V~IIGa-G~aGL~aA~~L~~~G~~~V~vlE~~~   34 (347)
T d1b5qa1           2 RVIVVGA-GMSGISAAKRLSEAGITDLLILEATD   34 (347)
T ss_dssp             CEEEECC-BHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred             CEEEECC-cHHHHHHHHHHHhCCCCcEEEEECCC
Confidence            5888888 6788999999999997 699998865

>d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Putative methyltransferase Atu0340
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=86.87  E-value=4.1  Score=34.39  Aligned_cols=79  Identities=13%  Similarity=0.075  Sum_probs=52.4

Q ss_pred             ccCcEEEEeCC-CchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhC---CCceeEEEeeCCCHHHHHHHHHHHHh
Q 022103           28 SKETIAIVTGA-NKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEK---GLPVNFFQLDVSDPSSIEAFVSWFKS  103 (302)
Q Consensus        28 ~~~k~vlItGa-s~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~---~~~~~~~~~Dlt~~~~~~~~~~~~~~  103 (302)
                      .++++||=..+ +|+++.+    +++.|++|+.++.+...++.+.+.....   ..++.++..|+.      .+++....
T Consensus       131 ~~~~rVLdlf~~tG~~sl~----aa~~GA~V~~VD~s~~al~~a~~N~~ln~~~~~~~~~i~~D~~------~~l~~~~~  200 (309)
T d2igta1         131 DRPLKVLNLFGYTGVASLV----AAAAGAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAM------KFIQREER  200 (309)
T ss_dssp             SSCCEEEEETCTTCHHHHH----HHHTTCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHH------HHHHHHHH
T ss_pred             cCCCeEEEecCCCcHHHHH----HHhCCCeEEEEeChHHHHHHHHHhhhhhcccCCcEEEEeCCHH------HhHHHHhh
Confidence            35777876655 4555544    4567999999999998887777655432   235778877763      33444444


Q ss_pred             hCCCccEEEEcCC
Q 022103          104 NFAALDILVNNAG  116 (302)
Q Consensus       104 ~~g~id~lv~~aG  116 (302)
                      ...++|+||...-
T Consensus       201 ~~~~fD~IilDPP  213 (309)
T d2igta1         201 RGSTYDIILTDPP  213 (309)
T ss_dssp             HTCCBSEEEECCC
T ss_pred             cCCCCCEEEECCC
Confidence            4468999998854

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=86.63  E-value=1.4  Score=32.44  Aligned_cols=79  Identities=14%  Similarity=0.048  Sum_probs=53.8

Q ss_pred             cccCcEEEEeCCC----------chHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHH
Q 022103           27 WSKETIAIVTGAN----------KGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEA   96 (302)
Q Consensus        27 ~~~~k~vlItGas----------~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~   96 (302)
                      ....|.|||.|++          ..-+.+.+++|.+.|++++++..+++-...-       -.-..-+..+--..+.+.+
T Consensus         4 ~~~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVstd-------~d~aD~lYfePlt~e~v~~   76 (127)
T d1a9xa3           4 RTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTD-------PEMADATYIEPIHWEVVRK   76 (127)
T ss_dssp             CSSCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGC-------GGGSSEEECSCCCHHHHHH
T ss_pred             CCCCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhcC-------hhhcceeeeecCCHHHHHH
Confidence            3556889999984          4457788999999999999999887543210       0112233344445677777


Q ss_pred             HHHHHHhhCCCccEEEEcCCC
Q 022103           97 FVSWFKSNFAALDILVNNAGV  117 (302)
Q Consensus        97 ~~~~~~~~~g~id~lv~~aG~  117 (302)
                      ++++-     ++|.++...|.
T Consensus        77 Ii~~E-----~pd~il~~~GG   92 (127)
T d1a9xa3          77 IIEKE-----RPDAVLPTMGG   92 (127)
T ss_dssp             HHHHH-----CCSEEECSSSH
T ss_pred             HHHHh-----CcCCeEEEeee
Confidence            77654     78999888876

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.55  E-value=0.41  Score=39.10  Aligned_cols=35  Identities=26%  Similarity=0.375  Sum_probs=28.9

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecCh
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELGLTVILTARDV   64 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~   64 (302)
                      +.+.|+|.|| |-=|+..|..|+++|++|+++.++.
T Consensus         4 ~~~kViVIGa-G~aGL~aA~~L~~~G~~V~VlEa~~   38 (449)
T d2dw4a2           4 KTGKVIIIGS-GVSGLAAARQLQSFGMDVTLLEARD   38 (449)
T ss_dssp             CCCEEEEECC-BHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            3456899998 5668899999999999999987754

>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Arsenite-translocating ATPase ArsA
species: Escherichia coli [TaxId: 562]

Probab=86.21  E-value=0.24  Score=40.93  Aligned_cols=40  Identities=30%  Similarity=0.341  Sum_probs=34.0

Q ss_pred             ccccCcEEEEeCCCchHHHHH-----HHHHHHcCCEEEEEecChh
Q 022103           26 WWSKETIAIVTGANKGIGFAL-----VKRLAELGLTVILTARDVE   65 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~al-----a~~l~~~G~~V~l~~r~~~   65 (302)
                      ++-.++.++|+.|=||+|+.+     |..|+++|.+|++++-+++
T Consensus        15 ~~~~~~~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~Dp~   59 (279)
T d1ihua2          15 IARNEHGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDPA   59 (279)
T ss_dssp             HHTTSCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESCCC
T ss_pred             hhcCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            445677888888899999876     7999999999999999975

>d1peya_ c.23.1.1 (A:) Sporulation response regulator Spo0F {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Sporulation response regulator Spo0F
species: Bacillus subtilis [TaxId: 1423]

Probab=86.18  E-value=3  Score=29.59  Aligned_cols=81  Identities=11%  Similarity=0.241  Sum_probs=55.3

Q ss_pred             CcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCcc
Q 022103           30 ETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALD  109 (302)
Q Consensus        30 ~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id  109 (302)
                      +|+|||.=-...+-..+.+.|.+.|++|..+....+    +.+.+.+...++.+....+-+.+.+ ++++++++....+-
T Consensus         1 NkrILvVDD~~~~~~~l~~~L~~~g~~v~~a~~g~e----al~~~~~~~~dlillD~~mP~~~G~-el~~~lr~~~~~~p   75 (119)
T d1peya_           1 NEKILIVDDQSGIRILLNEVFNKEGYQTFQAANGLQ----ALDIVTKERPDLVLLDMKIPGMDGI-EILKRMKVIDENIR   75 (119)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEEESSHHH----HHHHHHHHCCSEEEEESCCTTCCHH-HHHHHHHHHCTTCE
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHcCCEEEEeCCHHH----HHHHHHhCCCCEEEEeccCCCCCHH-HHHHHHHHhCCCCc
Confidence            578999999999999999999999999886554333    3334444444566655555566554 56677777666676


Q ss_pred             EEEEcC
Q 022103          110 ILVNNA  115 (302)
Q Consensus       110 ~lv~~a  115 (302)
                      +++..+
T Consensus        76 vi~lt~   81 (119)
T d1peya_          76 VIIMTA   81 (119)
T ss_dssp             EEEEES
T ss_pred             EEEEec
Confidence            666654

>d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=86.14  E-value=2.1  Score=34.86  Aligned_cols=35  Identities=23%  Similarity=0.327  Sum_probs=29.9

Q ss_pred             cccCcEEEEeCCCchHHHHHHHHHHHc-CCEEEEEec
Q 022103           27 WSKETIAIVTGANKGIGFALVKRLAEL-GLTVILTAR   62 (302)
Q Consensus        27 ~~~~k~vlItGas~gIG~ala~~l~~~-G~~V~l~~r   62 (302)
                      +++||+++|-|- |-+|..+|+.|+++ |++|+.+.-
T Consensus        29 ~l~g~~v~IqGf-GnVG~~~a~~L~~~~G~kvv~vsD   64 (239)
T d1gtma1          29 TLKGKTIAIQGY-GNAGYYLAKIMSEDFGMKVVAVSD   64 (239)
T ss_dssp             CSTTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHhcCcceeeccc
Confidence            489999999998 55999999999875 999887754

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=86.06  E-value=0.31  Score=37.27  Aligned_cols=33  Identities=12%  Similarity=0.099  Sum_probs=26.7

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEec
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELGLTVILTAR   62 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r   62 (302)
                      +++.|+|.|| |.+|.++|..|.+.|.+|.++.+
T Consensus         2 ~~~~VvIIGg-G~~G~e~A~~l~~~g~~v~v~~~   34 (185)
T d1q1ra1           2 ANDNVVIVGT-GLAGVEVAFGLRASGWEGNIRLV   34 (185)
T ss_dssp             CSCEEEEECC-SHHHHHHHHHHHHTTCCSEEEEE
T ss_pred             CCCCEEEECC-cHHHHHHHHHHHHcCCceEEEEe
Confidence            5678999988 78999999999999987544433

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=85.86  E-value=0.32  Score=39.19  Aligned_cols=32  Identities=28%  Similarity=0.330  Sum_probs=27.9

Q ss_pred             EEEeCCCchHHHHHHHHHHHcCCEEEEEecChh
Q 022103           33 AIVTGANKGIGFALVKRLAELGLTVILTARDVE   65 (302)
Q Consensus        33 vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~   65 (302)
                      |+|.|| |--|...|..|+++|++|+++.++..
T Consensus         5 ViIIGa-G~aGl~aA~~la~~G~~V~liEk~~~   36 (251)
T d2i0za1           5 VIVIGG-GPSGLMAAIGAAEEGANVLLLDKGNK   36 (251)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            678887 56889999999999999999998754

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=85.75  E-value=4.1  Score=29.02  Aligned_cols=84  Identities=17%  Similarity=0.147  Sum_probs=48.8

Q ss_pred             cEEEEeCCC---chHHHHHHHHHHHcCCEEEEEecChhhHH--HHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           31 TIAIVTGAN---KGIGFALVKRLAELGLTVILTARDVERGQ--RAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        31 k~vlItGas---~gIG~ala~~l~~~G~~V~l~~r~~~~~~--~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      |++.|.|+|   +-.|..+.+.|.+.|++|+.+..+.+...  .+...+.+-...+... .=....+.+.++++++.+. 
T Consensus         2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVnP~~~~i~G~~~y~sl~~lp~~~D~v-vi~vp~~~~~~~l~~~~~~-   79 (116)
T d1y81a1           2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEIEGLKCYRSVRELPKDVDVI-VFVVPPKVGLQVAKEAVEA-   79 (116)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGSCTTCCEE-EECSCHHHHHHHHHHHHHT-
T ss_pred             cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEccccccccCccccccchhccccceEE-EEEeCHHHHHHHHHHHHhc-
Confidence            689999997   67999999999999999988865432210  0000011111111111 1123456666777776664 


Q ss_pred             CCccEEEEcCCC
Q 022103          106 AALDILVNNAGV  117 (302)
Q Consensus       106 g~id~lv~~aG~  117 (302)
                       .+..++...|.
T Consensus        80 -g~k~v~~~~g~   90 (116)
T d1y81a1          80 -GFKKLWFQPGA   90 (116)
T ss_dssp             -TCCEEEECTTS
T ss_pred             -CCceEEeccch
Confidence             35566666554

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=85.67  E-value=0.47  Score=39.08  Aligned_cols=36  Identities=17%  Similarity=0.152  Sum_probs=32.1

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEec
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTAR   62 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r   62 (302)
                      .+++|++|+|-|- |-+|..+|+.|.+.|++|+.++-
T Consensus        27 ~~l~g~~v~IqGf-GnVG~~~a~~L~~~Gakvv~vsD   62 (242)
T d1v9la1          27 GGIEGKTVAIQGM-GNVGRWTAYWLEKMGAKVIAVSD   62 (242)
T ss_dssp             SCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEEEC
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEeec
Confidence            4789999999985 77999999999999999988764

>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methyltransferase SPy1538
species: Streptococcus pyogenes [TaxId: 1314]

Probab=85.66  E-value=3.6  Score=30.51  Aligned_cols=76  Identities=7%  Similarity=0.142  Sum_probs=51.9

Q ss_pred             cccCcEEEEeCCC-chHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHhhCC--CceeEEEeeCCCHHHHHHHHHHHH
Q 022103           27 WSKETIAIVTGAN-KGIGFALVKRLAELGL-TVILTARDVERGQRAVESLSEKG--LPVNFFQLDVSDPSSIEAFVSWFK  102 (302)
Q Consensus        27 ~~~~k~vlItGas-~gIG~ala~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dlt~~~~~~~~~~~~~  102 (302)
                      .++|++||=.|++ |.+|.+    .+.+|+ +|+.++.+++..+...+.+...+  .++.++..|..+      +++   
T Consensus        12 ~~~g~~vlDl~~GtG~~~ie----a~~rga~~v~~ve~~~~a~~~~~~n~~~~~~~~~~~ii~~D~~~------~l~---   78 (152)
T d2esra1          12 YFNGGRVLDLFAGSGGLAIE----AVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAER------AID---   78 (152)
T ss_dssp             CCCSCEEEEETCTTCHHHHH----HHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHH------HHH---
T ss_pred             hCCCCeEEEcCCccCHHHHH----HHHhCcceeeeehhchhhhhhhhhhhhhcccccchhhhcccccc------ccc---
Confidence            5789999877775 546554    455776 79999999988777777666544  357888887432      222   


Q ss_pred             hhCCCccEEEEcC
Q 022103          103 SNFAALDILVNNA  115 (302)
Q Consensus       103 ~~~g~id~lv~~a  115 (302)
                      ....+.|+++...
T Consensus        79 ~~~~~fDiIf~DP   91 (152)
T d2esra1          79 CLTGRFDLVFLDP   91 (152)
T ss_dssp             HBCSCEEEEEECC
T ss_pred             ccccccceeEech
Confidence            2335799997653

>d2csua3 c.23.4.1 (A:291-453) Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Succinyl-CoA synthetase domains
family: Succinyl-CoA synthetase domains
domain: Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=85.52  E-value=3.2  Score=31.13  Aligned_cols=83  Identities=12%  Similarity=0.113  Sum_probs=54.8

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCC---CHHHHHHHHHHHHhhC
Q 022103           29 KETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVS---DPSSIEAFVSWFKSNF  105 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt---~~~~~~~~~~~~~~~~  105 (302)
                      +|+++.|.+.+||.|--++..+.+.|.++.  .-+++-.++..+.+......-.  ++|++   +.+.+.+.++.+.+. 
T Consensus         2 ~G~rvaiit~sGG~~~l~aD~~~~~Gl~l~--~l~~~t~~~L~~~lp~~~~~~N--PlD~~~~~~~~~~~~~l~~~~~d-   76 (163)
T d2csua3           2 RGNKVAIMTNAGGPGVLTADELDKRGLKLA--TLEEKTIEELRSFLPPMAAVKN--PVDMIASARGEDYYRTAKLLLQD-   76 (163)
T ss_dssp             SSSEEEEEESCHHHHHHHHHHHHTTTCEEC--CCCHHHHHHHHHHSCTTCEESS--EEECCTTCCHHHHHHHHHHHHHS-
T ss_pred             CCCeEEEEECChHHHHHHHHHHHHcCCccC--CCCHHHHHHHHHhCCCcccCCC--cccccCCCCHHHHHHHHHHHHcC-
Confidence            688899999999999999999999997764  3444444444444443221111  24443   567777777777665 


Q ss_pred             CCccEEEEcCC
Q 022103          106 AALDILVNNAG  116 (302)
Q Consensus       106 g~id~lv~~aG  116 (302)
                      +.+|.++....
T Consensus        77 ~~vd~v~v~~~   87 (163)
T d2csua3          77 PNVDMLIAICV   87 (163)
T ss_dssp             TTCSEEEEEEE
T ss_pred             CCcCEEEEeec
Confidence            67888765443

>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Thermotoga maritima [TaxId: 2336]

Probab=85.19  E-value=6  Score=29.68  Aligned_cols=73  Identities=11%  Similarity=0.014  Sum_probs=39.3

Q ss_pred             EEEeCCCchHHHHHHHH-HHH-c----CCEEEEEecChhhHHHHHHHHhhC-CCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           33 AIVTGANKGIGFALVKR-LAE-L----GLTVILTARDVERGQRAVESLSEK-GLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        33 vlItGas~gIG~ala~~-l~~-~----G~~V~l~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      +.|.||++ +|...+-. |++ .    +-++++++.+.++++...+..... ...... ..--.+.+.+           
T Consensus         3 IaiIGaGs-~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~~d~~~~~~~~~~~~-~~t~~~~~~l-----------   69 (162)
T d1up7a1           3 IAVIGGGS-SYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDRFKV-LISDTFEGAV-----------   69 (162)
T ss_dssp             EEEETTTC-TTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHHTTSSEE-EECSSHHHHH-----------
T ss_pred             EEEECCCH-HHHHHHHHHHHhcccccCccEEEEEecCcHHHHHHHHHHHhhhccCceE-EEecCccccc-----------
Confidence            67778754 45444422 222 1    358999999998876544433221 111222 2211122222           


Q ss_pred             CCccEEEEcCCCC
Q 022103          106 AALDILVNNAGVS  118 (302)
Q Consensus       106 g~id~lv~~aG~~  118 (302)
                      ...|++|..+|..
T Consensus        70 ~~aDvVVita~~~   82 (162)
T d1up7a1          70 VDAKYVIFQFRPG   82 (162)
T ss_dssp             TTCSEEEECCCTT
T ss_pred             CCCCEEEEecccC
Confidence            2679999999975

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=85.15  E-value=0.32  Score=39.28  Aligned_cols=31  Identities=23%  Similarity=0.319  Sum_probs=27.8

Q ss_pred             EEEeCCCchHHHHHHHHHHHcCCEEEEEecCh
Q 022103           33 AIVTGANKGIGFALVKRLAELGLTVILTARDV   64 (302)
Q Consensus        33 vlItGas~gIG~ala~~l~~~G~~V~l~~r~~   64 (302)
                      |+|.|| |--|...|..|+++|++|+++.++.
T Consensus         3 V~IIGa-G~aGL~aA~~L~~~G~~V~vlE~~~   33 (347)
T d2ivda1           3 VAVVGG-GISGLAVAHHLRSRGTDAVLLESSA   33 (347)
T ss_dssp             EEEECC-BHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred             EEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence            788888 7789999999999999999998865

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=85.12  E-value=0.63  Score=39.45  Aligned_cols=37  Identities=14%  Similarity=0.169  Sum_probs=32.7

Q ss_pred             cccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEec
Q 022103           25 KWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTAR   62 (302)
Q Consensus        25 ~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r   62 (302)
                      ..+++|++++|-|- |-+|..+|+.|.+.|++|+.++-
T Consensus        31 ~~~L~gktvaIqGf-GnVG~~~A~~L~e~Gakvv~vsD   67 (293)
T d1hwxa1          31 TPGFGDKTFAVQGF-GNVGLHSMRYLHRFGAKCVAVGE   67 (293)
T ss_dssp             CSSSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             CCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEEc
Confidence            34789999999998 67999999999999999988763

>d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methyltransferase TTHA0928
species: Thermus thermophilus [TaxId: 274]

Probab=84.67  E-value=1.4  Score=33.71  Aligned_cols=78  Identities=15%  Similarity=0.132  Sum_probs=48.0

Q ss_pred             ccCcEEEEeCCC-chHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCC
Q 022103           28 SKETIAIVTGAN-KGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFA  106 (302)
Q Consensus        28 ~~~k~vlItGas-~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g  106 (302)
                      .+|+++|=.|++ |.+|    ..++.+|++|++++.+.+..+.+.+.++..+....++..|   .+.+   .........
T Consensus        40 ~~g~~vLDl~~G~G~~~----i~a~~~ga~vv~vD~~~~a~~~~~~N~~~~~~~~~v~~~~---~d~~---~~~~~~~~~  109 (171)
T d1ws6a1          40 PRRGRFLDPFAGSGAVG----LEAASEGWEAVLVEKDPEAVRLLKENVRRTGLGARVVALP---VEVF---LPEAKAQGE  109 (171)
T ss_dssp             TTCCEEEEETCSSCHHH----HHHHHTTCEEEEECCCHHHHHHHHHHHHHHTCCCEEECSC---HHHH---HHHHHHTTC
T ss_pred             cCCCeEEEeccccchhh----hhhhhccchhhhcccCHHHHhhhhHHHHhhccccceeeee---hhcc---cccccccCC
Confidence            467777766665 4444    4556679999999999988877777666544333333322   2221   222233335


Q ss_pred             CccEEEEcC
Q 022103          107 ALDILVNNA  115 (302)
Q Consensus       107 ~id~lv~~a  115 (302)
                      ++|+|+.+.
T Consensus       110 ~fD~If~DP  118 (171)
T d1ws6a1         110 RFTVAFMAP  118 (171)
T ss_dssp             CEEEEEECC
T ss_pred             ccceeEEcc
Confidence            799998764

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=84.28  E-value=0.24  Score=35.30  Aligned_cols=52  Identities=17%  Similarity=0.024  Sum_probs=39.8

Q ss_pred             CCCccccCCCCCcccccccccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecCh
Q 022103            7 DPNYFSSSSSSSSLVSSTKWWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDV   64 (302)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~   64 (302)
                      .|+...||..+...     ...+||+|+|.|++ -=|..+|..|+..+.+++...|..
T Consensus        14 ~~G~i~Hs~~y~~~-----~~f~gK~VlVVG~g-~Sa~dia~~l~~~ak~v~~~~~r~   65 (107)
T d2gv8a2          14 VPGSVLHSSLFREP-----ELFVGESVLVVGGA-SSANDLVRHLTPVAKHPIYQSLLG   65 (107)
T ss_dssp             STTSEEEGGGCCCG-----GGGTTCCEEEECSS-HHHHHHHHHHTTTSCSSEEEECTT
T ss_pred             CCccEEECCcCcch-----hhcCCCeEEEECCC-CCHHHHHHHHHHhcCEEEEEEecC
Confidence            45666777776654     35689999999995 478889999998888877777754

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=84.16  E-value=1.8  Score=33.97  Aligned_cols=76  Identities=12%  Similarity=0.066  Sum_probs=54.9

Q ss_pred             CcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCC-CceeEEEeeCCCHHHHHHHHHHHHhhCCCc
Q 022103           30 ETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKG-LPVNFFQLDVSDPSSIEAFVSWFKSNFAAL  108 (302)
Q Consensus        30 ~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~i  108 (302)
                      +.+||=.|++.|.-   +..|+++|.+|+.++-+++-++.+.+.+...+ .++.++.+|..+.. +         ..+.+
T Consensus        16 ~~rVLDiGcG~G~~---~~~l~~~~~~v~gvD~s~~~i~~A~~~~~~~~~~~i~~~~~d~~~l~-~---------~~~~f   82 (231)
T d1vl5a_          16 NEEVLDVATGGGHV---ANAFAPFVKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMP-F---------TDERF   82 (231)
T ss_dssp             CCEEEEETCTTCHH---HHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCC-S---------CTTCE
T ss_pred             cCEEEEecccCcHH---HHHHHHhCCEEEEEECCHHHHhhhhhccccccccccccccccccccc-c---------ccccc
Confidence            57899999887743   46678889999999999987777666655444 46888888887642 0         11579


Q ss_pred             cEEEEcCCCC
Q 022103          109 DILVNNAGVS  118 (302)
Q Consensus       109 d~lv~~aG~~  118 (302)
                      |.+++...+.
T Consensus        83 D~v~~~~~l~   92 (231)
T d1vl5a_          83 HIVTCRIAAH   92 (231)
T ss_dssp             EEEEEESCGG
T ss_pred             cccccccccc
Confidence            9998887653

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=84.13  E-value=2.2  Score=34.58  Aligned_cols=36  Identities=19%  Similarity=0.215  Sum_probs=30.6

Q ss_pred             cccccCcEEEEeCCCchHHHHHHHHHHH-cCCEEEEEe
Q 022103           25 KWWSKETIAIVTGANKGIGFALVKRLAE-LGLTVILTA   61 (302)
Q Consensus        25 ~~~~~~k~vlItGas~gIG~ala~~l~~-~G~~V~l~~   61 (302)
                      ..++++++++|-|- |-+|..+|+.|.+ .|++|+.++
T Consensus        26 ~~~l~g~~vaIqG~-GnVG~~~a~~L~~e~Ga~vv~vs   62 (234)
T d1b26a1          26 GIDPKKATVAVQGF-GNVGQFAALLISQELGSKVVAVS   62 (234)
T ss_dssp             TCCTTTCEEEEECC-SHHHHHHHHHHHHHHCCEEEEEE
T ss_pred             CCCcCCCEEEEECC-CHHHHHHHHHHHHhcCCceEEee
Confidence            45789999999975 7799999999986 599998776

>d1dbwa_ c.23.1.1 (A:) Transcriptional regulatory protein FixJ, receiver domain {Rhizobium meliloti [TaxId: 382]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Transcriptional regulatory protein FixJ, receiver domain
species: Rhizobium meliloti [TaxId: 382]

Probab=83.83  E-value=4.5  Score=28.77  Aligned_cols=83  Identities=11%  Similarity=0.080  Sum_probs=56.2

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCC
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAA  107 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~  107 (302)
                      |++.++||.=-.-.+...+...|.+.|++|..+ .+.   ++..+.+.+....+.+....+-+.+.+ ++++++++....
T Consensus         1 M~~~~ILiVDDd~~~~~~l~~~L~~~g~~v~~a-~~~---~~al~~~~~~~~dlvi~D~~mp~~~G~-e~~~~lr~~~~~   75 (123)
T d1dbwa_           1 MQDYTVHIVDDEEPVRKSLAFMLTMNGFAVKMH-QSA---EAFLAFAPDVRNGVLVTDLRMPDMSGV-ELLRNLGDLKIN   75 (123)
T ss_dssp             CCCCEEEEEESSHHHHHHHHHHHHHTTCEEEEE-SCH---HHHHHHGGGCCSEEEEEECCSTTSCHH-HHHHHHHHTTCC
T ss_pred             CCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEE-CCH---HHHHHHHhhcCCcEEEEeccCccccch-HHHHHHHhcCCC
Confidence            456789999998999999999999999998754 343   344455555444454544444566554 567777776666


Q ss_pred             ccEEEEcC
Q 022103          108 LDILVNNA  115 (302)
Q Consensus       108 id~lv~~a  115 (302)
                      +-+++.++
T Consensus        76 ~~iI~lt~   83 (123)
T d1dbwa_          76 IPSIVITG   83 (123)
T ss_dssp             CCEEEEEC
T ss_pred             CeEEEEEe
Confidence            66666654

>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=83.74  E-value=0.46  Score=39.63  Aligned_cols=31  Identities=29%  Similarity=0.541  Sum_probs=27.4

Q ss_pred             EEEeCCCchHHHHHHHHHHHcCCEEEEEecCh
Q 022103           33 AIVTGANKGIGFALVKRLAELGLTVILTARDV   64 (302)
Q Consensus        33 vlItGas~gIG~ala~~l~~~G~~V~l~~r~~   64 (302)
                      |+|.|+ |..|...|..|+++|++|+++.+..
T Consensus        19 VlVIG~-G~aGl~aA~~la~~G~~V~lvEK~~   49 (308)
T d1y0pa2          19 VVVVGS-GGAGFSAAISATDSGAKVILIEKEP   49 (308)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEecCC
Confidence            788887 7799999999999999999998753

>d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein TT1466
species: Thermus thermophilus [TaxId: 274]

Probab=83.70  E-value=2.8  Score=30.83  Aligned_cols=86  Identities=19%  Similarity=0.225  Sum_probs=49.6

Q ss_pred             cCcEEEEeCCC---chHHHHHHHHHHHcCCEEEEEecChhh--H--HHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHH
Q 022103           29 KETIAIVTGAN---KGIGFALVKRLAELGLTVILTARDVER--G--QRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWF  101 (302)
Q Consensus        29 ~~k~vlItGas---~gIG~ala~~l~~~G~~V~l~~r~~~~--~--~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~  101 (302)
                      +.|++.|.|+|   +-.|..+.+.|.+.|+++..+.-+...  .  ..+...+.+....+..... +...+.+.++++++
T Consensus        12 ~pksIAVVGaS~~~~k~g~~v~~~L~~~g~~~~~v~~~~~~~~i~g~~~~~~l~~i~~~iD~v~v-~~p~~~v~~~v~~~   90 (136)
T d1iuka_          12 QAKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPRFQGEELFGEEAVASLLDLKEPVDILDV-FRPPSALMDHLPEV   90 (136)
T ss_dssp             HCCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGGGTTSEETTEECBSSGGGCCSCCSEEEE-CSCHHHHTTTHHHH
T ss_pred             CCCeEEEEeecCCCCCchHHHHHHHhcCCCCceEEEeccccceeeceecccchhhccCCCceEEE-eccHHHHHHHHHHH
Confidence            56899999998   679999999999999998887543210  0  0000001111111111111 22456666666666


Q ss_pred             HhhCCCccEEEEcCCC
Q 022103          102 KSNFAALDILVNNAGV  117 (302)
Q Consensus       102 ~~~~g~id~lv~~aG~  117 (302)
                      .+.  .+..++...|.
T Consensus        91 ~~~--g~k~i~~q~G~  104 (136)
T d1iuka_          91 LAL--RPGLVWLQSGI  104 (136)
T ss_dssp             HHH--CCSCEEECTTC
T ss_pred             Hhh--CCCeEEEecCc
Confidence            655  35566666665

>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=83.60  E-value=0.45  Score=37.88  Aligned_cols=35  Identities=23%  Similarity=0.321  Sum_probs=29.9

Q ss_pred             CcEEEEeCCCchHHH-----HHHHHHHHcCCEEEEEecCh
Q 022103           30 ETIAIVTGANKGIGF-----ALVKRLAELGLTVILTARDV   64 (302)
Q Consensus        30 ~k~vlItGas~gIG~-----ala~~l~~~G~~V~l~~r~~   64 (302)
                      +|++.|+|+-||+|+     .+|..|++.|.+|++++-+.
T Consensus         2 ~~vIav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~D~   41 (237)
T d1g3qa_           2 GRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGDL   41 (237)
T ss_dssp             CEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred             CeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            588999999999887     56888899999999998663

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=83.21  E-value=1.9  Score=36.29  Aligned_cols=74  Identities=20%  Similarity=0.234  Sum_probs=51.5

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHhhC--CCceeEEEeeCCCHHHHHHHHHHHHhh
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGL-TVILTARDVERGQRAVESLSEK--GLPVNFFQLDVSDPSSIEAFVSWFKSN  104 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dlt~~~~~~~~~~~~~~~  104 (302)
                      .+|++||-.|++.|+   ++..+++.|+ +|++++.++. ...+.+.+...  ..++.++..|+.+.+.          .
T Consensus        32 ~~~~~VLDiGcG~G~---ls~~aa~~Ga~~V~avd~s~~-~~~a~~~~~~n~~~~~v~~~~~~~~~~~~----------~   97 (316)
T d1oria_          32 FKDKVVLDVGSGTGI---LCMFAAKAGARKVIGIECSSI-SDYAVKIVKANKLDHVVTIIKGKVEEVEL----------P   97 (316)
T ss_dssp             HTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEECSTT-HHHHHHHHHHTTCTTTEEEEESCTTTCCC----------S
T ss_pred             CCcCEEEEEecCCcH---HHHHHHHhCCCEEEEEcCcHH-HhhhhhHHHHhCCccccceEeccHHHccc----------c
Confidence            579999999998875   5667778886 6999998753 44444433333  3468899988877531          1


Q ss_pred             CCCccEEEEcC
Q 022103          105 FAALDILVNNA  115 (302)
Q Consensus       105 ~g~id~lv~~a  115 (302)
                      ...+|+++...
T Consensus        98 ~~~~D~ivs~~  108 (316)
T d1oria_          98 VEKVDIIISEW  108 (316)
T ss_dssp             SSCEEEEEECC
T ss_pred             cceeEEEeeee
Confidence            24789988753

>d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Apoptosis-inducing factor (AIF)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.51  E-value=2  Score=31.44  Aligned_cols=35  Identities=23%  Similarity=0.223  Sum_probs=28.4

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHH----cCCEEEEEecCh
Q 022103           29 KETIAIVTGANKGIGFALVKRLAE----LGLTVILTARDV   64 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~----~G~~V~l~~r~~   64 (302)
                      +.++++|.|| |.+|.++|..|++    .|.+|.++.+..
T Consensus        36 ~~k~i~IvGg-G~~G~E~A~~l~~~~~~~g~~Vt~i~~~~   74 (137)
T d1m6ia2          36 EVKSITIIGG-GFLGSELACALGRKARALGTEVIQLFPEK   74 (137)
T ss_dssp             HCSEEEEECC-SHHHHHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             cCCEEEEECC-CHHHHHHHHHHHHHHHhcCCEEEEecccc
Confidence            3678888887 8899999988864    489999988754

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=82.20  E-value=3.6  Score=29.82  Aligned_cols=77  Identities=12%  Similarity=0.002  Sum_probs=51.2

Q ss_pred             cCcEEEEeCCC----------chHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHH
Q 022103           29 KETIAIVTGAN----------KGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFV   98 (302)
Q Consensus        29 ~~k~vlItGas----------~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~   98 (302)
                      ..|.+||.|++          ..-+.+.+++|.+.|++++++..+++-...       +-.-..-+..+=-..+.+..++
T Consensus         3 ~~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTVst-------d~d~aD~lYfeplt~e~v~~Ii   75 (121)
T d1a9xa4           3 DREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVST-------DYDTSDRLYFEPVTLEDVLEIV   75 (121)
T ss_dssp             SSCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSSTT-------STTSSSEEECCCCSHHHHHHHH
T ss_pred             CCCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhhhhc-------ChhhcCceEEccCCHHHHHHHH
Confidence            46789999984          345678899999999999999988754221       0011222333333456666666


Q ss_pred             HHHHhhCCCccEEEEcCCC
Q 022103           99 SWFKSNFAALDILVNNAGV  117 (302)
Q Consensus        99 ~~~~~~~g~id~lv~~aG~  117 (302)
                      ++-     ++|.++...|.
T Consensus        76 ~~E-----~p~~ii~~~GG   89 (121)
T d1a9xa4          76 RIE-----KPKGVIVQYGG   89 (121)
T ss_dssp             HHH-----CCSEEECSSST
T ss_pred             HHh-----CCCEEEeehhh
Confidence            543     78999888776

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.97  E-value=0.59  Score=38.74  Aligned_cols=31  Identities=29%  Similarity=0.377  Sum_probs=26.8

Q ss_pred             EEEeCCCchHHHHHHHHHHHcCCEEEEEecCh
Q 022103           33 AIVTGANKGIGFALVKRLAELGLTVILTARDV   64 (302)
Q Consensus        33 vlItGas~gIG~ala~~l~~~G~~V~l~~r~~   64 (302)
                      |+|.|| |--|...|..|+++|++|+++.++.
T Consensus         2 ViVIGa-G~aGL~aA~~L~~~G~~V~VlE~~~   32 (383)
T d2v5za1           2 VVVVGG-GISGMAAAKLLHDSGLNVVVLEARD   32 (383)
T ss_dssp             EEEECC-BHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             EEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence            678887 5678999999999999999998765

>d1v71a1 c.79.1.1 (A:6-323) Hypothetical protein C320.14 (SPCC320.14, SPCC330.15c) {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Hypothetical protein C320.14 (SPCC320.14, SPCC330.15c)
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=81.77  E-value=3  Score=34.78  Aligned_cols=56  Identities=13%  Similarity=0.041  Sum_probs=34.9

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeC
Q 022103           32 IAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDV   88 (302)
Q Consensus        32 ~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl   88 (302)
                      ..+|++.+|-.|.++|...+..|++.+++...... ....+.++..|.++..+..+.
T Consensus        70 ~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~-~~k~~~l~~~Ga~vi~~~~~~  125 (318)
T d1v71a1          70 AGVLTFSSGNHAQAIALSAKILGIPAKIIMPLDAP-EAKVAATKGYGGQVIMYDRYK  125 (318)
T ss_dssp             HCEEECCSSHHHHHHHHHHHHTTCCEEEEEETTCC-HHHHHHHHHTTCEEEEECTTT
T ss_pred             ceeeeeccchhhHHHHHhhcccccceeeccccccc-HHHHHHHHHcCCcEEeccCCc
Confidence            45788888889999999999999875554332211 223444555565555444333

>d1ys7a2 c.23.1.1 (A:7-127) Transcriptional regulatory protein PrrA, N-terminal domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Transcriptional regulatory protein PrrA, N-terminal domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=81.55  E-value=6.5  Score=27.79  Aligned_cols=81  Identities=14%  Similarity=0.153  Sum_probs=56.6

Q ss_pred             cEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCccE
Q 022103           31 TIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDI  110 (302)
Q Consensus        31 k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id~  110 (302)
                      +++||.=-.-.+...+...|.+.|++|..+....    ++.+.+.+....+.+....+-+.+.+ ++++++++....+-+
T Consensus         2 PkILiVDD~~~~~~~l~~~L~~~g~~v~~a~~~~----eal~~~~~~~~dlvl~D~~mP~~~G~-el~~~ir~~~~~~pi   76 (121)
T d1ys7a2           2 PRVLVVDDDSDVLASLERGLRLSGFEVATAVDGA----EALRSATENRPDAIVLDINMPVLDGV-SVVTALRAMDNDVPV   76 (121)
T ss_dssp             CEEEEECSCHHHHHHHHHHHHHTTCEEEEESSHH----HHHHHHHHSCCSEEEEESSCSSSCHH-HHHHHHHHTTCCCCE
T ss_pred             CEEEEEECCHHHHHHHHHHHHHCCCEEEEECCHH----HHHHHHHhCCCCEEEEEeeccCcccH-HHHHHHHhcCCCCEE
Confidence            3688888888999999999999999988654433    33444555445555555555566654 567778777667777


Q ss_pred             EEEcCC
Q 022103          111 LVNNAG  116 (302)
Q Consensus       111 lv~~aG  116 (302)
                      ++..+-
T Consensus        77 I~lt~~   82 (121)
T d1ys7a2          77 CVLSAR   82 (121)
T ss_dssp             EEEECC
T ss_pred             EEEEee
Confidence            777653

>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=81.48  E-value=9  Score=28.89  Aligned_cols=118  Identities=8%  Similarity=-0.027  Sum_probs=60.6

Q ss_pred             EEEEeCC-CchHHHHHHHHHHHcC----CEEEEEecChhh--HHHHHHHH----hhCCCceeEEEeeCCCHHHHHHHHHH
Q 022103           32 IAIVTGA-NKGIGFALVKRLAELG----LTVILTARDVER--GQRAVESL----SEKGLPVNFFQLDVSDPSSIEAFVSW  100 (302)
Q Consensus        32 ~vlItGa-s~gIG~ala~~l~~~G----~~V~l~~r~~~~--~~~~~~~l----~~~~~~~~~~~~Dlt~~~~~~~~~~~  100 (302)
                      .+.|.|| +.|.+..++..+....    -++++++.+.++  ++......    .+.+...  -....+|..+   .+  
T Consensus         3 KI~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~~~~~~~d~~~~~~~~~~~~~~--~~~~~td~~~---al--   75 (169)
T d1s6ya1           3 KIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPI--EIHLTLDRRR---AL--   75 (169)
T ss_dssp             EEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCC--EEEEESCHHH---HH--
T ss_pred             EEEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccHHHHHHHHHHHHHHHHhcCCCc--eeeecCCchh---hc--
Confidence            3566666 4567777776666542    379999988754  33222211    1222222  2233444421   11  


Q ss_pred             HHhhCCCccEEEEcCCCCCCCCCCCCHHHHHHHHHh----------------hhhHHHHHHHHHhhhhhcCCCCCcEEEe
Q 022103          101 FKSNFAALDILVNNAGVSFNDIYKNTVEHAETVIRT----------------NFYGAKLLTESLLPLFRRSPSKSRILNI  164 (302)
Q Consensus       101 ~~~~~g~id~lv~~aG~~~~~~~~~~~e~~~~~~~v----------------n~~~~~~l~~~~~~~l~~~~~~~~iv~v  164 (302)
                           ..-|++|+++|....+     -+.-++.+..                ..+....+.+.+.+.+.+....+-++++
T Consensus        76 -----~gaDvVv~ta~~~~~~-----~~~r~~~i~~~~gi~~~~t~g~~~~~~~~~n~~i~~~i~~~i~~~~pda~~i~v  145 (169)
T d1s6ya1          76 -----DGADFVTTQFRVGGLE-----ARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELCPDAWLINF  145 (169)
T ss_dssp             -----TTCSEEEECCCTTHHH-----HHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEC
T ss_pred             -----CCCCEEEEccccCCCC-----CeehhhhhhhhcCceeccccCcchhhhccccHHHHHHHHHHHhhcCCCeEEEEe
Confidence                 2679999999985321     0000111111                1223445667777777776455666665


Q ss_pred             cC
Q 022103          165 SS  166 (302)
Q Consensus       165 sS  166 (302)
                      |-
T Consensus       146 tN  147 (169)
T d1s6ya1         146 TN  147 (169)
T ss_dssp             SS
T ss_pred             CC
Confidence            53

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=81.04  E-value=0.65  Score=37.66  Aligned_cols=34  Identities=29%  Similarity=0.429  Sum_probs=29.0

Q ss_pred             EEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhH
Q 022103           33 AIVTGANKGIGFALVKRLAELGLTVILTARDVERG   67 (302)
Q Consensus        33 vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~   67 (302)
                      |+|.|| |.-|...|..|+++|.+|+++.++....
T Consensus         7 ViIIGa-G~aGl~aA~~la~~G~~V~vlEk~~~~G   40 (253)
T d2gqfa1           7 NIIIGA-GAAGLFCAAQLAKLGKSVTVFDNGKKIG   40 (253)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEecCCCCC
Confidence            788887 6678899999999999999999987543

>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=81.03  E-value=1.8  Score=34.76  Aligned_cols=80  Identities=14%  Similarity=0.074  Sum_probs=55.9

Q ss_pred             cCcEEEEeCCCchHHHHHHHHHHH-cC----CEEEEEecChhhHHHHHHHHhhC------CCceeEEEeeCCCHHHHHHH
Q 022103           29 KETIAIVTGANKGIGFALVKRLAE-LG----LTVILTARDVERGQRAVESLSEK------GLPVNFFQLDVSDPSSIEAF   97 (302)
Q Consensus        29 ~~k~vlItGas~gIG~ala~~l~~-~G----~~V~l~~r~~~~~~~~~~~l~~~------~~~~~~~~~Dlt~~~~~~~~   97 (302)
                      ++.+||..|+++|--.++...++. .|    .+|+.+.++.+-.+...+.+...      -..+.++..|..+.-     
T Consensus        80 ~g~~VLeIGtGsGY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~~~~~nv~~~~~d~~~~~-----  154 (223)
T d1r18a_          80 PGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGY-----  154 (223)
T ss_dssp             TTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCC-----
T ss_pred             CCCeEEEecCCCCHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhhcCccEEEEEeccccccc-----
Confidence            578999999988877777666654 45    48999999987666655544321      136788888876321     


Q ss_pred             HHHHHhhCCCccEEEEcCCCC
Q 022103           98 VSWFKSNFAALDILVNNAGVS  118 (302)
Q Consensus        98 ~~~~~~~~g~id~lv~~aG~~  118 (302)
                           ...+.+|.|+.+++..
T Consensus       155 -----~~~~~fD~Iiv~~a~~  170 (223)
T d1r18a_         155 -----PPNAPYNAIHVGAAAP  170 (223)
T ss_dssp             -----GGGCSEEEEEECSCBS
T ss_pred             -----ccccceeeEEEEeech
Confidence                 1225899999988874

>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Arginine methyltransferase, HMT1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=80.40  E-value=3.1  Score=35.05  Aligned_cols=75  Identities=21%  Similarity=0.206  Sum_probs=51.0

Q ss_pred             ccCcEEEEeCCCchHHHHHHHHHHHcCC-EEEEEecChhhHHHHHHHHhhC--CCceeEEEeeCCCHHHHHHHHHHHHhh
Q 022103           28 SKETIAIVTGANKGIGFALVKRLAELGL-TVILTARDVERGQRAVESLSEK--GLPVNFFQLDVSDPSSIEAFVSWFKSN  104 (302)
Q Consensus        28 ~~~k~vlItGas~gIG~ala~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dlt~~~~~~~~~~~~~~~  104 (302)
                      .+|++||-.|++.|+   ++..++++|+ +|++++.+. ..+.+.+...+.  ..++.++..|+.+..-          .
T Consensus        37 ~~~~~VLDlGcGtG~---ls~~aa~~Ga~~V~avd~s~-~~~~a~~~~~~~~~~~~i~~i~~~~~~l~~----------~  102 (328)
T d1g6q1_          37 FKDKIVLDVGCGTGI---LSMFAAKHGAKHVIGVDMSS-IIEMAKELVELNGFSDKITLLRGKLEDVHL----------P  102 (328)
T ss_dssp             HTTCEEEEETCTTSH---HHHHHHHTCCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSCC----------S
T ss_pred             CCcCEEEEeCCCCCH---HHHHHHHhCCCEEEEEeCCH-HHHHHHHHHHHhCccccceEEEeehhhccC----------c
Confidence            579999999998774   4566778886 699998875 333333333333  3468889988876531          1


Q ss_pred             CCCccEEEEcCC
Q 022103          105 FAALDILVNNAG  116 (302)
Q Consensus       105 ~g~id~lv~~aG  116 (302)
                      ...+|+++...-
T Consensus       103 ~~~~D~i~se~~  114 (328)
T d1g6q1_         103 FPKVDIIISEWM  114 (328)
T ss_dssp             SSCEEEEEECCC
T ss_pred             ccceeEEEEEec
Confidence            147899887643

>d1m1na_ c.92.2.3 (A:) Nitrogenase iron-molybdenum protein, alpha chain {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: Chelatase-like
superfamily: "Helical backbone" metal receptor
family: Nitrogenase iron-molybdenum protein
domain: Nitrogenase iron-molybdenum protein, alpha chain
species: Azotobacter vinelandii [TaxId: 354]

Probab=80.33  E-value=2.4  Score=38.06  Aligned_cols=81  Identities=14%  Similarity=0.099  Sum_probs=54.0

Q ss_pred             ccccCcEEEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhC
Q 022103           26 WWSKETIAIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNF  105 (302)
Q Consensus        26 ~~~~~k~vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~  105 (302)
                      ..+.||+++|.|+. ....++++.|.+.|++|+.++-.....++..+.+...+..  .+..|-.|..++.+.+.+.    
T Consensus       341 ~~l~Gkrv~i~~~~-~~~~~l~~~l~elGmevv~~~~~~~~~~d~~~~~~~~~~~--~~i~~d~~~~el~~~i~~~----  413 (477)
T d1m1na_         341 PRLEGKRVMLYIGG-LRPRHVIGAYEDLGMEVVGTGYEFAHNDDYDRTMKEMGDS--TLLYDDVTGYEFEEFVKRI----  413 (477)
T ss_dssp             HHHTTCEEEECBSS-SHHHHTHHHHHTTTCEEEEEEESSCCHHHHHTTTTTSCTT--CEEEESCBHHHHHHHHHHH----
T ss_pred             HhhcCCcEEEecCc-hhHHHHHHHHHHCCCEEEEEeecCCChHHHHHHHHhcCCC--cEEecCCCHHHHHHHHHhc----
Confidence            45789999998874 5889999999888999988766443333322222222222  2234555677788777776    


Q ss_pred             CCccEEEEc
Q 022103          106 AALDILVNN  114 (302)
Q Consensus       106 g~id~lv~~  114 (302)
                       ++|+++-+
T Consensus       414 -~pDL~ig~  421 (477)
T d1m1na_         414 -KPDLIGSG  421 (477)
T ss_dssp             -CCSEEEEC
T ss_pred             -CCCEEEEC
Confidence             78999865

>d1c4oa2 c.37.1.19 (A:410-583) Nucleotide excision repair enzyme UvrB {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Tandem AAA-ATPase domain
domain: Nucleotide excision repair enzyme UvrB
species: Thermus thermophilus [TaxId: 274]

Probab=80.18  E-value=4.8  Score=30.96  Aligned_cols=64  Identities=17%  Similarity=0.224  Sum_probs=52.0

Q ss_pred             HHcCCEEEEEecChhhHHHHHHHHhhCCCceeEEEeeCCCHHHHHHHHHHHHhhCCCccEEEEcCCC
Q 022103           51 AELGLTVILTARDVERGQRAVESLSEKGLPVNFFQLDVSDPSSIEAFVSWFKSNFAALDILVNNAGV  117 (302)
Q Consensus        51 ~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dlt~~~~~~~~~~~~~~~~g~id~lv~~aG~  117 (302)
                      .+.|-+++++..+....+...+.+.+.|-++..++.++.+.+ -.+.++.++.  |.+++||.+--.
T Consensus        28 ~~~g~r~lvfc~t~~~~~~l~~~L~~~Gi~a~~~Hg~~~~~e-R~~~l~~F~~--G~~~vLVaT~v~   91 (174)
T d1c4oa2          28 AARGERTLVTVLTVRMAEELTSFLVEHGIRARYLHHELDAFK-RQALIRDLRL--GHYDCLVGINLL   91 (174)
T ss_dssp             HHTTCEEEEECSSHHHHHHHHHHHHHTTCCEEEECTTCCHHH-HHHHHHHHHT--TSCSEEEESCCC
T ss_pred             HhcCCcEEEEEcchhHHHHHHHHHHhcCCceEEEecccchHH-HHHHHHHHHC--CCeEEEEeeeee
Confidence            356889999999999999999999999989999999998655 4455555554  799999988643

>d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot fungus (Peniophora sp. SG) [TaxId: 204723]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Pyranose 2-oxidase
species: White-rot fungus (Peniophora sp. SG) [TaxId: 204723]

Probab=80.18  E-value=0.73  Score=38.97  Aligned_cols=30  Identities=20%  Similarity=0.410  Sum_probs=25.7

Q ss_pred             EEEeCCCchHHHHHHHHHHHcCCEEEEEecC
Q 022103           33 AIVTGANKGIGFALVKRLAELGLTVILTARD   63 (302)
Q Consensus        33 vlItGas~gIG~ala~~l~~~G~~V~l~~r~   63 (302)
                      ++|.|++- =|..+|.+|++.|++|+++.+.
T Consensus         7 viIVGsG~-aG~v~A~~La~~G~kVlvLEaG   36 (379)
T d2f5va1           7 VVIVGSGP-IGCTYARELVGAGYKVAMFDIG   36 (379)
T ss_dssp             EEEECCSH-HHHHHHHHHHHTTCEEEEECSS
T ss_pred             EEEECcCH-HHHHHHHHHhhCCCeEEEEecC
Confidence            67888754 4999999999999999999874

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=80.14  E-value=1  Score=35.10  Aligned_cols=36  Identities=19%  Similarity=0.177  Sum_probs=28.8

Q ss_pred             EEEeCCCchHHHHHHHHHHHcCCEEEEEecChhhHHHH
Q 022103           33 AIVTGANKGIGFALVKRLAELGLTVILTARDVERGQRA   70 (302)
Q Consensus        33 vlItGas~gIG~ala~~l~~~G~~V~l~~r~~~~~~~~   70 (302)
                      +.|.| .|.+|..+|..|+ +|++|+.++-+.++.+..
T Consensus         3 I~ViG-lG~vGl~~a~~~a-~g~~V~g~Din~~~v~~l   38 (196)
T d1dlja2           3 IAVAG-SGYVGLSLGVLLS-LQNEVTIVDILPSKVDKI   38 (196)
T ss_dssp             EEEEC-CSHHHHHHHHHHT-TTSEEEEECSCHHHHHHH
T ss_pred             EEEEC-CChhHHHHHHHHH-CCCcEEEEECCHHHHHHH
Confidence            45666 6999999998775 799999999998775544

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=80.10  E-value=0.59  Score=36.54  Aligned_cols=31  Identities=23%  Similarity=0.220  Sum_probs=25.3

Q ss_pred             EEEEeCCCchHHHHHHHHHHHcC-CEEEEEec
Q 022103           32 IAIVTGANKGIGFALVKRLAELG-LTVILTAR   62 (302)
Q Consensus        32 ~vlItGas~gIG~ala~~l~~~G-~~V~l~~r   62 (302)
                      +|.|.||||..|.++.+.|.++- .++..+..
T Consensus         3 kVaIvGATGyvG~eLirlL~~HP~~ei~~l~s   34 (176)
T d1vkna1           3 RAGIIGATGYTGLELVRLLKNHPEAKITYLSS   34 (176)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHCTTEEEEEEEC
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCCceEEEeec
Confidence            58999999999999999999985 46555433