Citrus Sinensis ID: 022148

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300--
Protein Sequence
MTSDGATSTSAARRKPTWRERENNRRRERRRRAIAAKIYTGLRAQGNYNLPKHCDNNEVLKALCAEAGWVVEEDGTTYRKGTRPPPIDIASTSARVTPYSSQNPSPLSSSFPSPVPSYPTSPTRGDANNPSSLLPFLRNAIPSSLPPLRISNSAPVTPPLSSPTKSKPIPNWESMAKESMSALNYPFYAISAPASPIHRQLYAPAATIHECDESDTSTVDSGHWISFQKFAPSASGVPTSPTFNLVRHVAQPSFANEALKEKGRGSEFQFESAPVKPWEGEKIHDVGMEDLDLSLGIGKAQS
Secondary Structure (PSIPRED)
cccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHcccEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHcccccccccccccccccccccccccccccccEEccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccHHHHHHcHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHcccEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHcccccccccccccccccccccccccccccccccHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHccccccccccccEccccccEEEEccccccEEEcccccccc
Coil and Loop (DISEMBL)
mtsdgatstsaarrkptwrerENNRRRERRRRAIAAKIYTGLraqgnynlpkhcdnnEVLKALCAEAgwvveedgttyrkgtrpppidiastsarvtpyssqnpsplsssfpspvpsyptsptrgdannpssllpflrnaipsslpplrisnsapvtpplssptkskpipnweSMAKESMSalnypfyaisapaspihrqlyapaatihecdesdtstvdsghwisfqkfapsasgvptsptfnlVRHVAQPSFANEALkekgrgsefqfesapvkpwegekihdvgmedldlslgigkaqs
Flexible Loop (DISEMBL)
mtsdgatstsaarrkptwrerennrrrerrRRAIAAKIytglraqgnynlPKHCDNNEVLKALCAEAGWvveedgttyrkgtrpppidIASTSARVTPYSSQnpsplsssfpsPVPSYPTSPTRGDANNPSSLLPFLRNAIPSSLPPLRISnsapvtpplssptkskpipnWESMAKESMSALNYPFYAISAPASPIHRQLYAPAATIHECDESDTSTVDSGHWISFQKFAPSASGVPTSPTFNLVRHVAQPSFANEALKekgrgsefqfesapvkpwegekiHDVGMEDLDLSLGIGKAQS
Low Complexity Region (SEG)
MTSDGATSTSAARRKPTWrerennrrrerrrrAIAAKIYTGLRAQGNYNLPKHCDNNEVLKALCAEAGWVVEEDGTTYRKGTRPPPIDIASTSARVTpyssqnpsplsssfpspvpsyptspTRGDANNPSSLLPFLRNAIPSSLPPLRISNSApvtpplssptkskpipNWESMAKESMSALNYPFYAISAPASPIHRQLYAPAATIHECDESDTSTVDSGHWISFQKFAPSASGVPTSPTFNLVRHVAQPSFANEALKEKGRGSEFQFESAPVKPWEGEKIHDVGMEDLDLSLGIGKAQS
Disordered region (IsUnstruct)
********************************AIAAKIYTGLRAQGNYNLPKHCDNNEVLKALCAEAGWVVEEDGTT********************************************************************************************************ALNYPFYAISAPASPIHRQLYAPAATIHECDE***STVDSGHWISFQKFA***********FNLVRH******************************************************
Disordered Region (DISOPRED)
*********************************IAAKIYTGLRAQGNYNLPKHCDNNEVLKALCAEAGWVVEE*******************************************************************************************************************************************************************************************************APVKPWEGEKIHDVGMEDLDL**GI*****
Disordered Region (DISEMBL)
****************************RRRRAIAAKIYTGLRAQGNYNLPKHCDNNEVLKALCAEAGWVVEEDGTTYRKGTRPPPIDIASTSA********************************ANNPSSLLPFLRNAIPSSLPPLRISNSA***********SKPIPNWESMAKESMSALNYPFYAISAPASPIHRQLYAPAATIHE*********DSGHWISFQKFAPSASGVPTSPTFNLVRHVAQPSFANEAL***************VKPWEGEKIHDVGMEDLDLSLGIGKAQS
Disordered Region (DISPRO)
****************TWR******RRERRRRAIAAKIYTGLRAQGNYNLPKHCDNNEVLKALCAEAGWVVEEDGTTYRKGTRPPPIDIASTSAR*TP***Q*PSPLSSS******************NPSSLLPFLRNAIPSSLPPLRISNSAPVTPPL*******PIPNWESMAKESMSALNYPFYAISAP*******************ESDTSTVDSGHWISFQKFAPSASGVPTSPTFNLVRHVAQPSFANEALKEKGRGSEFQFESAPVKPWEGEKIHDVGMEDLDLSLG******
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
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TM Helix, Signal Peptide (MEMSAT_SVM)
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TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MTSDGATSTSAARRKPTWRERENNRRRERRRRAIAAKIYTGLRAQGNYNLPKHCDNNEVLKALCAEAGWVVEEDGTTYRKGTRPPPIDIASTSARVTPYSSQNPSPLSSSFPSPVPSYPTSPTRGDANNPSSLLPFLRNAIPSSLPPLRISNSAPVTPPLSSPTKSKPIPNWESMAKESMSALNYPFYAISAPASPIHRQLYAPAATIHECDESDTSTVDSGHWISFQKFAPSASGVPTSPTFNLVRHVAQPSFANEALKEKGRGSEFQFESAPVKPWEGEKIHDVGMEDLDLSLGIGKAQS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	302	2.2.26 [Sep-21-2011]
Q8S307	336	Protein BRASSINAZOLE-RESI	yes	no	0.996	0.895	0.686	1e-105
Q9LN63	335	Protein BRASSINAZOLE-RESI	no	no	0.996	0.898	0.687	1e-103
Q94A43	318	BES1/BZR1 homolog protein	no	no	0.903	0.858	0.567	2e-70
Q9S7F3	276	BES1/BZR1 homolog protein	no	no	0.880	0.963	0.538	4e-62
Q9ZV88	325	BES1/BZR1 homolog protein	no	no	0.844	0.784	0.407	2e-32
O49404	284	BES1/BZR1 homolog protein	no	no	0.880	0.936	0.421	3e-28
O80831	691	Beta-amylase 7 OS=Arabido	no	no	0.367	0.160	0.416	5e-13
Q9FH80	689	Beta-amylase 8 OS=Arabido	no	no	0.327	0.143	0.411	5e-12

>sp|Q8S307|BZR1_ARATH Protein BRASSINAZOLE-RESISTANT 1 OS=Arabidopsis thaliana GN=BZR1 PE=1 SV=1

 Score =  380 bits (975), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 230/335 (68%), Positives = 260/335 (77%), Gaps = 34/335 (10%)

Query: 1   MTSDGATSTSAA---------RRKPTWRERENNRRRERRRRAIAAKIYTGLRAQGNYNLP 51
           MTSDGATSTSAA         RRKP+WRERENNRRRERRRRA+AAKIYTGLRAQG+YNLP
Sbjct: 1   MTSDGATSTSAAAAAAAAAAARRKPSWRERENNRRRERRRRAVAAKIYTGLRAQGDYNLP 60

Query: 52  KHCDNNEVLKALCAEAGWVVEEDGTTYRKGTRPPPIDIASTSARVTPYSSQNPSPLSSSF 111
           KHCDNNEVLKALC EAGWVVEEDGTTYRKG +P P +IA TS+RVTPYSSQN SPLSS+F
Sbjct: 61  KHCDNNEVLKALCVEAGWVVEEDGTTYRKGCKPLPGEIAGTSSRVTPYSSQNQSPLSSAF 120

Query: 112 PSPVPSYPT--------SPTRGDANN--PSSLLPFLRN-AIPSSLPPLRISNSAPVTPPL 160
            SP+PSY          SP+RG+ NN   S+  PFLRN  IPSSLP LRISNS PVTPP+
Sbjct: 121 QSPIPSYQVSPSSSSFPSPSRGEPNNNMSSTFFPFLRNGGIPSSLPSLRISNSCPVTPPV 180

Query: 161 SSPTKS--KPIPNWES-------MAKESMSALNYPFYAISAPASPIHRQLYAPAATIHEC 211
           SSPT    KP+PNWES       +AK+SM++ NYPFYA+SAPASP HR  +   ATI EC
Sbjct: 181 SSPTSKNPKPLPNWESIAKQSMAIAKQSMASFNYPFYAVSAPASPTHRHQFHTPATIPEC 240

Query: 212 DESDTSTVDSGHWISFQKFAP----SASGVPTSPTFNLVRHVAQPSFANE-ALKEKGRGS 266
           DESD+STVDSGHWISFQKFA     SAS VPTSPTFNLV+   Q    N  A +E G+ S
Sbjct: 241 DESDSSTVDSGHWISFQKFAQQQPFSASMVPTSPTFNLVKPAPQQMSPNTAAFQEIGQSS 300

Query: 267 EFQFESAPVKPWEGEKIHDVGMEDLDLSLGIGKAQ 301
           EF+FE++ VKPWEGE+IHDVGMEDL+L+LG GKA+
Sbjct: 301 EFKFENSQVKPWEGERIHDVGMEDLELTLGNGKAR 335

Positive brassinosteroid-signaling protein. Mediates downstream growth responses and negative feedback regulation of brassinosteroid biosynthesis.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9LN63|BZR2_ARATH Protein BRASSINAZOLE-RESISTANT 2 OS=Arabidopsis thaliana GN=BZR2 PE=1 SV=1

 Score =  376 bits (966), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 231/336 (68%), Positives = 262/336 (77%), Gaps = 35/336 (10%)

Query: 1   MTSDGATSTSAA--------RRKPTWRERENNRRRERRRRAIAAKIYTGLRAQGNYNLPK 52
           MTSDGATSTSAA        RRKP+WRERENNRRRERRRRA+AAKIYTGLRAQGNYNLPK
Sbjct: 1   MTSDGATSTSAAAAAAAMATRRKPSWRERENNRRRERRRRAVAAKIYTGLRAQGNYNLPK 60

Query: 53  HCDNNEVLKALCAEAGWVVEEDGTTYRKGTRPPPIDIASTSARVTPYSSQNPSPLSSSFP 112
           HCDNNEVLKALC+EAGWVVEEDGTTYRKG +P P D+A +S+R TPYSS N SPLSS+F 
Sbjct: 61  HCDNNEVLKALCSEAGWVVEEDGTTYRKGHKPLPGDMAGSSSRATPYSSHNQSPLSSTFD 120

Query: 113 SPVPSYPTSPTR---------GDANNPSSLLPFLRN-AIPSSLPPLRISNSAPVTPPLSS 162
           SP+ SY  SP+          GD +N S++ PFLRN  IPSSLPPLRISNSAPVTPP+SS
Sbjct: 121 SPILSYQVSPSSSSFPSPSRVGDPHNISTIFPFLRNGGIPSSLPPLRISNSAPVTPPVSS 180

Query: 163 PTKS--KPIPNWESM--------AKESMSALNYPFYAISAPASPI-HRQLYAPAATIHEC 211
           PT    KP+P WES         AK+SM++LNYPFYA+SAPASP  HRQ +AP ATI EC
Sbjct: 181 PTSRNPKPLPTWESFTKQSMSMAAKQSMTSLNYPFYAVSAPASPTHHRQFHAP-ATIPEC 239

Query: 212 DESDTSTVDSGHWISFQKFAP----SASGVPTSPTFNLVRHVAQPSFANE-ALKEKGRGS 266
           DESD+STVDSGHWISFQKFA     SAS VPTSPTFNLV+   Q    N  A++E G+ S
Sbjct: 240 DESDSSTVDSGHWISFQKFAQQQPFSASMVPTSPTFNLVKPAPQQLSPNTAAIQEIGQSS 299

Query: 267 EFQFESAPVKPWEGEKIHDVGMEDLDLSLGIGKAQS 302
           EF+FE++ VKPWEGE+IHDV MEDL+L+LG GKA S
Sbjct: 300 EFKFENSQVKPWEGERIHDVAMEDLELTLGNGKAHS 335

Positive brassinosteroid-signaling protein. Transcription factor that activates target gene expression by binding specifically to the DNA sequence 5'-CANNTG-3'(E box) through its N-terminal domain. Can bind individually to the promoter as a homodimer or synergistically as a heterodimer with BIM1, BIM2 or BIM3. The C-terminal domain is probably involved in transcriptional activation.

Arabidopsis thaliana (taxid: 3702)

>sp|Q94A43|BEH2_ARATH BES1/BZR1 homolog protein 2 OS=Arabidopsis thaliana GN=BEH2 PE=1 SV=1

 Score =  266 bits (679), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 180/317 (56%), Positives = 216/317 (68%), Gaps = 44/317 (13%)

Query: 14  RKPTWRERENNRRRERRRRAIAAKIYTGLRAQGNYNLPKHCDNNEVLKALCAEAGWVVEE 73
           R PTW+ERENN++RERRRRAI AKIY+GLRAQGNY LPKHCDNNEVLKALC EAGW+VE+
Sbjct: 16  RTPTWKERENNKKRERRRRAITAKIYSGLRAQGNYKLPKHCDNNEVLKALCLEAGWIVED 75

Query: 74  DGTTYRKGTRPPPIDIASTSARVTPYSSQNPSPLSSSFPSPVPSY--------PTSPTRG 125
           DGTTYRKG +PP  DI+ T    +  SS  PSP SS+FPSP PSY          SP+R 
Sbjct: 76  DGTTYRKGFKPPASDISGTPTNFSTNSSIQPSPQSSAFPSPAPSYHGSPVSSSFPSPSRY 135

Query: 126 DANNPSS--LLPFLRN---AIPSSLPPLRISNSAPVTPPLSSPTK--------SKPIPNW 172
           D  NPSS  LLPFL N   +IP++LPPLRISNSAPVTPPLSSPT         S+ +PN 
Sbjct: 136 DG-NPSSYLLLPFLHNIASSIPANLPPLRISNSAPVTPPLSSPTSRGSKRKLTSEQLPN- 193

Query: 173 ESMAKESMSALNYPFYAISAPASPIHRQLYAPAATIHECDESDTSTV-DSGHWISFQKFA 231
                 S+  L +P +AISAP+SP  R  +    TI ECDES+  ++ DSG WI+FQ  A
Sbjct: 194 ----GGSLHVLRHPLFAISAPSSPTRRAGHQTPPTIPECDESEEDSIEDSGRWINFQSTA 249

Query: 232 PSASGVPTSPTFNLVRHVAQPSFANEALKE-------KGRGSEFQFESAPVKPWEGEKIH 284
                 PTSPTFNLV+   Q S A +  +         GRG+EF+FE+  VKPWEGE IH
Sbjct: 250 ------PTSPTFNLVQ---QTSMAIDMKRSDWGMSGMNGRGAEFEFENGTVKPWEGEMIH 300

Query: 285 DVGMEDLDLSLGIGKAQ 301
           +VG+EDL+L+LG  KA+
Sbjct: 301 EVGVEDLELTLGGTKAR 317

Arabidopsis thaliana (taxid: 3702)

>sp|Q9S7F3|BEH1_ARATH BES1/BZR1 homolog protein 1 OS=Arabidopsis thaliana GN=BEH1 PE=1 SV=1

 Score =  238 bits (607), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 161/299 (53%), Positives = 197/299 (65%), Gaps = 33/299 (11%)

Query: 1   MTSDGATSTSAARRKPTWRERENNRRRERRRRAIAAKIYTGLRAQGNYNLPKHCDNNEVL 60
           MT+ G  ST+A  R PTW+ERENN++RERRRRAIAAKI+TGLR+QGNY LPKHCDNNEVL
Sbjct: 1   MTASGGGSTAATGRMPTWKERENNKKRERRRRAIAAKIFTGLRSQGNYKLPKHCDNNEVL 60

Query: 61  KALCAEAGWVVEEDGTTYRKGTRPPPIDIASTSARVTPYSSQNPSPLSSSFPSPVPSYPT 120
           KALC EAGW+V EDGTTYRKG+RP    +  +S +++P SS   SP+ S   SP  S   
Sbjct: 61  KALCLEAGWIVHEDGTTYRKGSRPTETTVPCSSIQLSPQSSAFQSPIPSYQASPSSSSYP 120

Query: 121 SPTRGDANNPSS-LLPFLRN-AIPSSLPPLRISNSAPVTPPLSSPTKSKP-IPNWESMAK 177
           SPTR D N  S+ L+P+L+N A   +L PLRISNSAPVTPP+SSP +S P +P W+S   
Sbjct: 121 SPTRFDPNQSSTYLIPYLQNLASSGNLAPLRISNSAPVTPPISSPRRSNPRLPRWQSS-- 178

Query: 178 ESMSALNYPFYAISAPASPIHRQLYAPAATIHECDESDTSTVDSGHWISFQKFAPSASGV 237
                 N+P   +SAP+SP  R  +    +I ECDESD STVDS  W +FQ    S +  
Sbjct: 179 ------NFP---VSAPSSPTRRLHH--YTSIPECDESDVSTVDSCRWGNFQSVNVSQT-C 226

Query: 238 PTSPTFNLVRHVAQPSFANEALKEKGRGSEFQFESAPVKPWEGEKIHDVGMEDLDLSLG 296
           P SPTFNLV                G+          VKPWEGEKIHDVG++DL+L+LG
Sbjct: 227 PPSPTFNLV----------------GKSVSSVGVDVSVKPWEGEKIHDVGIDDLELTLG 269

Arabidopsis thaliana (taxid: 3702)

>sp|Q9ZV88|BEH4_ARATH BES1/BZR1 homolog protein 4 OS=Arabidopsis thaliana GN=BEH4 PE=1 SV=1

 Score =  139 bits (351), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 143/351 (40%), Positives = 172/351 (49%), Gaps = 96/351 (27%)

Query: 10  SAARRKPTWRERENNRRRERRRRAIAAKIYTGLRAQGNYNLPKHCDNNEVLKALCAEAGW 69
           ++  R PTWRERENN+RRERRRRAIAAKI+TGLR  GNY LPKHCDNNEVLKALC EAGW
Sbjct: 2   TSGTRMPTWRERENNKRRERRRRAIAAKIFTGLRMYGNYELPKHCDNNEVLKALCNEAGW 61

Query: 70  VVEEDGTTYRKGTRPPP--IDIASTSARVTPYSSQNPSPLSSSFPSPVPSYPTSP----- 122
           +VE DGTTYRKG   P   ++I   SA  +P SS  PSP +S  PSP  S   SP     
Sbjct: 62  IVEPDGTTYRKGCSRPVERMEIGGGSATASPCSSYQPSPCASYNPSPGSSNFMSPASSSF 121

Query: 123 ---TRGDANNPSSLLPFLRNA-------------IPSSLPPLRISNSAPVTPPLSSPTKS 166
              T GD     SL+P+L++              +P+ L     S SAPVTPPLSSPT  
Sbjct: 122 ANLTSGDGQ---SLIPWLKHLSTTSSSSASSSSRLPNYLYIPGGSISAPVTPPLSSPTAR 178

Query: 167 KPIPN--WESMAKESMSALNYPFYAISAPASPIHRQLYAPAATIHECDESDTSTVDSGHW 224
            P  N  W+         LN  F+  S P SP  RQ+                 +    W
Sbjct: 179 TPRMNTDWQQ--------LNNSFFVSSTPPSPT-RQI-----------------IPDSEW 212

Query: 225 ISFQKFAPSASGVPTSPTFNLVRH----------------------------VAQPSF-- 254
            S  + A S   VP SPTF+LV                                 P+   
Sbjct: 213 FSGIQLAQS---VPASPTFSLVSQNPFGFKEEAASAAGGGGGSRMWTPGQSGTCSPAIPP 269

Query: 255 -----ANEALKEKGRGSEFQFES---APVKPWEGEKIH-DVGMEDLDLSLG 296
                A+  + E     EF F S     VK WEGE+IH + G +DL+L+LG
Sbjct: 270 GADQTADVPMSEAVAPPEFAFGSNTNGLVKAWEGERIHEESGSDDLELTLG 320

Arabidopsis thaliana (taxid: 3702)

>sp|O49404|BEH3_ARATH BES1/BZR1 homolog protein 3 OS=Arabidopsis thaliana GN=BEH3 PE=1 SV=1

 Score =  125 bits (315), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 126/299 (42%), Positives = 168/299 (56%), Gaps = 33/299 (11%)

Query: 10  SAARRKPTWRERENNRRRERRRRAIAAKIYTGLRAQGNYNLPKHCDNNEVLKALCAEAGW 69
           ++  R PTW+ERENN+RRERRRRAIAAKI+ GLR  GN+ LPKHCDNNEVLKALC EAGW
Sbjct: 2   TSGTRTPTWKERENNKRRERRRRAIAAKIFAGLRIHGNFKLPKHCDNNEVLKALCNEAGW 61

Query: 70  VVEEDGTTYRKGTRPPP-IDIASTSARVTPYSSQNPSPLSSSFPSPVPSYPTSPTR--GD 126
            VE+DGTTYRKG +P   +D+ + S   +P SS   SP +S  PSP  S   SPT   GD
Sbjct: 62  TVEDDGTTYRKGCKPMDRMDLMNGSTSASPCSSYQHSPRASYNPSPSSSSFPSPTNPFGD 121

Query: 127 ANNPSSLLPFLRNAI---PSSLPPLRISN-SAPVTPPLS-SPTKSK---PIPNWESMAKE 178
           AN   SL+P+L+N     PS LP    ++ SAPVTPPL+ SPT+ +   P   W S  + 
Sbjct: 122 AN---SLIPWLKNLSSNSPSKLPFFHGNSISAPVTPPLARSPTRDQVTIPDSGWLSGMQT 178

Query: 179 SMSALNYPFYAISAPASPIHRQLYAPAATIHECDESDTSTVDSGHWISFQKFAPSASGVP 238
             S  + P +++ +      ++ +     + +C+        S  W   Q    S +  P
Sbjct: 179 PQSGPSSPTFSLVSRNPFFDKEAFK----MGDCN--------SPMWTPGQ----SGNCSP 222

Query: 239 TSPTFNLVRHVAQPSFANEALKEKGRGSEFQFESAPVKPWEGEKIH-DVGMEDLDLSLG 296
             P    V   +    A+    E   G      +  VKPWEGE+IH +   +DL+L+LG
Sbjct: 223 AIPAG--VDQNSDVPMADGMTAEFAFGCNAMAANGMVKPWEGERIHGECVSDDLELTLG 279

Arabidopsis thaliana (taxid: 3702)

>sp|O80831|BAM7_ARATH Beta-amylase 7 OS=Arabidopsis thaliana GN=BAM7 PE=2 SV=2

 Score = 75.5 bits (184), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 50/120 (41%), Positives = 63/120 (52%), Gaps = 9/120 (7%)

Query: 5   GATSTSAARRKPTWRERENNRRRERRRRAIAAKIYTGLRAQGNYNLPKHCDNNEVLKALC 64
           G      +RR     E+E  + RER RRAI A+I  GLR  GNYNL    D N+V+ AL 
Sbjct: 60  GTPGGGGSRRSRPLEEKERTKLRERHRRAITARILGGLRRHGNYNLRVRADINDVIAALA 119

Query: 65  AEAGWVVEEDGTTY---RKGTRPPPIDIASTSARVTPY-SSQNPSP-----LSSSFPSPV 115
            EAGWVV  DGTT+    +GT+P     A  +     + +SQ  SP     +SS   SPV
Sbjct: 120 REAGWVVLPDGTTFPSKSQGTKPTGGSSAVAAGSSASHIASQQTSPPALRVVSSGLRSPV 179

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 2

>sp|Q9FH80|BAM8_ARATH Beta-amylase 8 OS=Arabidopsis thaliana GN=BAM8 PE=2 SV=1

 Score = 72.0 bits (175), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 42/102 (41%), Positives = 57/102 (55%), Gaps = 3/102 (2%)

Query: 25  RRRERRRRAIAAKIYTGLRAQGNYNLPKHCDNNEVLKALCAEAGWVVEEDGTTYRKGTRP 84
           + RER RRAI +++  GLR  GN+ LP   D N+V+ AL  EAGW VE DGTTYR+  +P
Sbjct: 97  KLRERHRRAITSRMLAGLRQYGNFPLPARADMNDVIAALAREAGWSVEADGTTYRQSQQP 156

Query: 85  PPIDIASTSARVTPYSSQNPSPLSSSFPSPVPSYPTSPTRGD 126
             +    T +  +P SS   S L +   + + S   S  R D
Sbjct: 157 NHVVQFPTRSIESPLSS---STLKNCAKAAIESQQHSVLRND 195

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 2

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	302
255538564	321	BRASSINAZOLE-RESISTANT 1 protein, putati	0.996	0.937	0.723	1e-111
224137226	317	predicted protein [Populus trichocarpa]	0.996	0.949	0.735	1e-109
18086461	336	At1g75080/F9E10_7 [Arabidopsis thaliana]	0.996	0.895	0.689	1e-103
6651069	335	107 protein [Arabidopsis thaliana]	0.996	0.898	0.690	1e-103
18410764	336	brassinazole-resistant 1 protein [Arabid	0.996	0.895	0.686	1e-103
297839383	335	At1g75080/F9E10_7 [Arabidopsis lyrata su	0.993	0.895	0.689	1e-103
21592457	335	unknown [Arabidopsis thaliana]	0.996	0.898	0.690	1e-102
312282823	333	unnamed protein product [Thellungiella h	0.983	0.891	0.702	1e-102
42571545	357	protein brassinazole-resistant 2 [Arabid	0.996	0.843	0.687	1e-102
18394728	335	protein brassinazole-resistant 2 [Arabid	0.996	0.898	0.687	1e-102

>gi|255538564|ref|XP_002510347.1| BRASSINAZOLE-RESISTANT 1 protein, putative [Ricinus communis] gi|223551048|gb|EEF52534.1| BRASSINAZOLE-RESISTANT 1 protein, putative [Ricinus communis]

 Score =  407 bits (1045), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 233/322 (72%), Positives = 271/322 (84%), Gaps = 21/322 (6%)

Query: 1   MTSDGATSTSAA----RRKPTWRERENNRRRERRRRAIAAKIYTGLRAQGNYNLPKHCDN 56
           MTSDGATSTSAA    RRKP+WRERENNRRRERRRRAIAAKI++GLRAQGNYNLPKHCDN
Sbjct: 1   MTSDGATSTSAAAAAARRKPSWRERENNRRRERRRRAIAAKIFSGLRAQGNYNLPKHCDN 60

Query: 57  NEVLKALCAEAGWVVEEDGTTYRKGTRPPPIDIASTSARVTPYSSQNPSPLSSSFPSPVP 116
           NEVLKALC+EAGWVVE+DGTTYRKG RPPPIDI  TSAR+TPYSSQNPSPLSS+FPSP+P
Sbjct: 61  NEVLKALCSEAGWVVEDDGTTYRKGCRPPPIDIVGTSARITPYSSQNPSPLSSAFPSPIP 120

Query: 117 SYPT--------SPTRGDANN---PSSLLPFLRNAIPSSLPPLRISNSAPVTPPLSSPTK 165
           SY          SPTRGD N+    SS+LPFL+NAIP+SLPPLRISNSAPVTPPLSSPT 
Sbjct: 121 SYQVSPSSSSFPSPTRGDNNHNNAASSILPFLQNAIPASLPPLRISNSAPVTPPLSSPTS 180

Query: 166 S--KPIPNWESMAKESMSALNYPFYAISAPASPIHRQLYAPAATIHECDESDTSTVDSGH 223
              KPIPNWE +AK+SM++ NYPFYA+SAPASP HRQ +AP ATI ECDESD+STV+SG 
Sbjct: 181 RNPKPIPNWEFIAKQSMASFNYPFYAVSAPASPTHRQFHAP-ATIPECDESDSSTVESGQ 239

Query: 224 WISFQKFAPS-ASGVPTSPTFNLVRHVAQPSFANEALKEKGRGSEFQF--ESAPVKPWEG 280
           WISFQKF PS A+ +PTSPT+NL++ VA+   ++  +KE GR  EF+F   +  VKPWEG
Sbjct: 240 WISFQKFGPSMAAAMPTSPTYNLMKPVAEQILSSNVIKENGRSMEFEFGNGNGQVKPWEG 299

Query: 281 EKIHDVGMEDLDLSLGIGKAQS 302
           E+IH+VG++DL+L+LG GKA+S
Sbjct: 300 ERIHEVGLDDLELTLGNGKARS 321

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224137226|ref|XP_002327073.1| predicted protein [Populus trichocarpa] gi|222835388|gb|EEE73823.1| predicted protein [Populus trichocarpa]

 Score =  401 bits (1030), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 234/318 (73%), Positives = 264/318 (83%), Gaps = 17/318 (5%)

Query: 1   MTSDGATSTSAA-----RRKPTWRERENNRRRERRRRAIAAKIYTGLRAQGNYNLPKHCD 55
           MTSDGATSTSAA     RRKP+WRERENNRRRERRRRAIAAKI+TGLRAQGNYNLPK+CD
Sbjct: 1   MTSDGATSTSAAMAAATRRKPSWRERENNRRRERRRRAIAAKIFTGLRAQGNYNLPKYCD 60

Query: 56  NNEVLKALCAEAGWVVEEDGTTYRKGTRPPPIDIASTSARVTPYSSQNPSPLSSSFPSPV 115
           NNEVLKALCAEAGWVVEEDGTTYRKG RPPPI+I  TS RVTPYSSQNPSPLSS FPSP+
Sbjct: 61  NNEVLKALCAEAGWVVEEDGTTYRKGHRPPPIEIVGTSTRVTPYSSQNPSPLSSLFPSPI 120

Query: 116 PSY--------PTSPTRGDANNPSSLLPFLRNAIPSSLPPLRISNSAPVTPPLSSPTKS- 166
           PSY          SPTRGD N  S+LLPFLR+AIP SLPPLRISNSAPVTPPLSSPT   
Sbjct: 121 PSYQASPSSSSFPSPTRGDNNASSNLLPFLRSAIPLSLPPLRISNSAPVTPPLSSPTSRN 180

Query: 167 -KPIPNWESMAKESMSALNYPFYAISAPASPIHRQLYAPAATIHECDESDTSTVDSGHWI 225
            KPIPNW+ +AK+SM++ +YPF A+SAPASP HRQ +AP ATI ECDESDTSTV+SG WI
Sbjct: 181 PKPIPNWDFIAKQSMASFSYPFNAVSAPASPTHRQFHAP-ATIPECDESDTSTVESGQWI 239

Query: 226 SFQKFAPS-ASGVPTSPTFNLVRHVAQPSFANEALKEKGRGSEFQFESAPVKPWEGEKIH 284
           SFQKFAPS A+ +PTSPT+NLV  VAQ   ++  +KE     +F+F S  VKPWEGE+IH
Sbjct: 240 SFQKFAPSVAAAMPTSPTYNLVIPVAQQISSSNLVKESAVPMDFEFGSEQVKPWEGERIH 299

Query: 285 DVGMEDLDLSLGIGKAQS 302
           +VG++DL+L+LG GKAQS
Sbjct: 300 EVGLDDLELTLGSGKAQS 317

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18086461|gb|AAL57684.1| At1g75080/F9E10_7 [Arabidopsis thaliana] gi|20147315|gb|AAM10371.1| At1g75080/F9E10_7 [Arabidopsis thaliana]

 Score =  381 bits (978), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 231/335 (68%), Positives = 260/335 (77%), Gaps = 34/335 (10%)

Query: 1   MTSDGATSTSAA---------RRKPTWRERENNRRRERRRRAIAAKIYTGLRAQGNYNLP 51
           MTSDGATSTSAA         RRKP+WRERENNRRRERRRRA+AAKIYTGLRAQG+YNLP
Sbjct: 1   MTSDGATSTSAAAAAAAAAAARRKPSWRERENNRRRERRRRAVAAKIYTGLRAQGDYNLP 60

Query: 52  KHCDNNEVLKALCAEAGWVVEEDGTTYRKGTRPPPIDIASTSARVTPYSSQNPSPLSSSF 111
           KHCDNNEVLKALC EAGWVVEEDGTTYRKG +P P +IA TS+RVTPYSSQN SPLSS+F
Sbjct: 61  KHCDNNEVLKALCVEAGWVVEEDGTTYRKGCKPLPGEIAGTSSRVTPYSSQNQSPLSSAF 120

Query: 112 PSPVPSYPT--------SPTRGDANN--PSSLLPFLRN-AIPSSLPPLRISNSAPVTPPL 160
            SP+PSY          SP+RG+ NN   S+  PFLRN  IPSSLP LRISNS PVTPPL
Sbjct: 121 QSPIPSYQVSPSSSSFPSPSRGEPNNNMSSTFFPFLRNGGIPSSLPSLRISNSCPVTPPL 180

Query: 161 SSPTKS--KPIPNWES-------MAKESMSALNYPFYAISAPASPIHRQLYAPAATIHEC 211
           SSPT    KP+PNWES       +AK+SM++ NYPFYA+SAPASP HR  +   ATI EC
Sbjct: 181 SSPTSKNPKPLPNWESIAKQSMAIAKQSMASFNYPFYAVSAPASPTHRHQFHTPATIPEC 240

Query: 212 DESDTSTVDSGHWISFQKFAP----SASGVPTSPTFNLVRHVAQPSFANE-ALKEKGRGS 266
           DESD+STVDSGHWISFQKFA     SAS VPTSPTFNLV+   Q    N  A +E G+ S
Sbjct: 241 DESDSSTVDSGHWISFQKFAQQQPFSASMVPTSPTFNLVKPAPQQMSPNTAAFQEIGQSS 300

Query: 267 EFQFESAPVKPWEGEKIHDVGMEDLDLSLGIGKAQ 301
           EF+FE++ VKPWEGE+IHDVGMEDL+L+LG GKA+
Sbjct: 301 EFKFENSQVKPWEGERIHDVGMEDLELTLGNGKAR 335

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|6651069|gb|AAF22161.1|AF134217_1 107 protein [Arabidopsis thaliana]

 Score =  380 bits (975), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 232/336 (69%), Positives = 263/336 (78%), Gaps = 35/336 (10%)

Query: 1   MTSDGATSTSAA--------RRKPTWRERENNRRRERRRRAIAAKIYTGLRAQGNYNLPK 52
           MTSDGATSTSAA        RRKP+WRERENNRRRERRRRA+AAKIYTGLRAQGNYNLPK
Sbjct: 1   MTSDGATSTSAAAAAAAMATRRKPSWRERENNRRRERRRRAVAAKIYTGLRAQGNYNLPK 60

Query: 53  HCDNNEVLKALCAEAGWVVEEDGTTYRKGTRPPPIDIASTSARVTPYSSQNPSPLSSSFP 112
           HCDNNEVLKALC+EAGWVVEEDGTTYRKG +P P D+A +S+R TPYSS N SPLSS+F 
Sbjct: 61  HCDNNEVLKALCSEAGWVVEEDGTTYRKGHKPLPGDMAGSSSRATPYSSHNQSPLSSTFD 120

Query: 113 SPVPSYPTSPTR---------GDANNPSSLLPFLRN-AIPSSLPPLRISNSAPVTPPLSS 162
           SP+ SY  SP+          GD +N S++ PFLRN  IPSSLPPLRISNSAPVTPP+SS
Sbjct: 121 SPILSYQVSPSSSSFPSPSRVGDPHNISTIFPFLRNGGIPSSLPPLRISNSAPVTPPVSS 180

Query: 163 PTKS--KPIPNWESM--------AKESMSALNYPFYAISAPASPI-HRQLYAPAATIHEC 211
           PT    KP+P WES         AK+SM++LNYPFYA+SAPASP  HRQ +AP ATI EC
Sbjct: 181 PTSRNPKPLPTWESFTKQSMSMAAKQSMTSLNYPFYAVSAPASPTHHRQFHAP-ATIPEC 239

Query: 212 DESDTSTVDSGHWISFQKFAP----SASGVPTSPTFNLVRHVAQPSFANE-ALKEKGRGS 266
           DESD+STVDSGHWISFQKFA     SAS VPTSPTFNLV+   Q  F N  A++E G+ S
Sbjct: 240 DESDSSTVDSGHWISFQKFAQQQPFSASMVPTSPTFNLVKPAPQQLFPNTAAIQEIGQSS 299

Query: 267 EFQFESAPVKPWEGEKIHDVGMEDLDLSLGIGKAQS 302
           EF+FE++ VKPWEGE+IHDV MEDL+L+LG GKA S
Sbjct: 300 EFKFENSQVKPWEGERIHDVAMEDLELTLGNGKAHS 335

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18410764|ref|NP_565099.1| brassinazole-resistant 1 protein [Arabidopsis thaliana] gi|42572109|ref|NP_974145.1| brassinazole-resistant 1 protein [Arabidopsis thaliana] gi|57012606|sp|Q8S307.1|BZR1_ARATH RecName: Full=Protein BRASSINAZOLE-RESISTANT 1; AltName: Full=Protein BIN2 SUBSTRATE 2 gi|20270971|gb|AAM18490.1|AF494338_1 BZR1 protein [Arabidopsis thaliana] gi|21592862|gb|AAM64812.1| unknown [Arabidopsis thaliana] gi|332197548|gb|AEE35669.1| brassinazole-resistant 1 protein [Arabidopsis thaliana] gi|332197549|gb|AEE35670.1| brassinazole-resistant 1 protein [Arabidopsis thaliana]

 Score =  380 bits (975), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 230/335 (68%), Positives = 260/335 (77%), Gaps = 34/335 (10%)

Query: 1   MTSDGATSTSAA---------RRKPTWRERENNRRRERRRRAIAAKIYTGLRAQGNYNLP 51
           MTSDGATSTSAA         RRKP+WRERENNRRRERRRRA+AAKIYTGLRAQG+YNLP
Sbjct: 1   MTSDGATSTSAAAAAAAAAAARRKPSWRERENNRRRERRRRAVAAKIYTGLRAQGDYNLP 60

Query: 52  KHCDNNEVLKALCAEAGWVVEEDGTTYRKGTRPPPIDIASTSARVTPYSSQNPSPLSSSF 111
           KHCDNNEVLKALC EAGWVVEEDGTTYRKG +P P +IA TS+RVTPYSSQN SPLSS+F
Sbjct: 61  KHCDNNEVLKALCVEAGWVVEEDGTTYRKGCKPLPGEIAGTSSRVTPYSSQNQSPLSSAF 120

Query: 112 PSPVPSYPT--------SPTRGDANN--PSSLLPFLRN-AIPSSLPPLRISNSAPVTPPL 160
            SP+PSY          SP+RG+ NN   S+  PFLRN  IPSSLP LRISNS PVTPP+
Sbjct: 121 QSPIPSYQVSPSSSSFPSPSRGEPNNNMSSTFFPFLRNGGIPSSLPSLRISNSCPVTPPV 180

Query: 161 SSPTKS--KPIPNWES-------MAKESMSALNYPFYAISAPASPIHRQLYAPAATIHEC 211
           SSPT    KP+PNWES       +AK+SM++ NYPFYA+SAPASP HR  +   ATI EC
Sbjct: 181 SSPTSKNPKPLPNWESIAKQSMAIAKQSMASFNYPFYAVSAPASPTHRHQFHTPATIPEC 240

Query: 212 DESDTSTVDSGHWISFQKFAP----SASGVPTSPTFNLVRHVAQPSFANE-ALKEKGRGS 266
           DESD+STVDSGHWISFQKFA     SAS VPTSPTFNLV+   Q    N  A +E G+ S
Sbjct: 241 DESDSSTVDSGHWISFQKFAQQQPFSASMVPTSPTFNLVKPAPQQMSPNTAAFQEIGQSS 300

Query: 267 EFQFESAPVKPWEGEKIHDVGMEDLDLSLGIGKAQ 301
           EF+FE++ VKPWEGE+IHDVGMEDL+L+LG GKA+
Sbjct: 301 EFKFENSQVKPWEGERIHDVGMEDLELTLGNGKAR 335

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297839383|ref|XP_002887573.1| At1g75080/F9E10_7 [Arabidopsis lyrata subsp. lyrata] gi|297333414|gb|EFH63832.1| At1g75080/F9E10_7 [Arabidopsis lyrata subsp. lyrata]

 Score =  379 bits (974), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 231/335 (68%), Positives = 261/335 (77%), Gaps = 35/335 (10%)

Query: 1   MTSDGATSTSAA---------RRKPTWRERENNRRRERRRRAIAAKIYTGLRAQGNYNLP 51
           MTSDGATSTSAA         RRKP+WRERENNRRRERRRRA+AAKIYTGLRAQG+YNLP
Sbjct: 1   MTSDGATSTSAAAAAAAAAAARRKPSWRERENNRRRERRRRAVAAKIYTGLRAQGDYNLP 60

Query: 52  KHCDNNEVLKALCAEAGWVVEEDGTTYRKGTRPPPIDIASTSARVTPYSSQNPSPLSSSF 111
           KHCDNNEVLKALC EAGWVVEEDGTTYRKG +P   +IA TS+RVTPYSSQN SPLSS+F
Sbjct: 61  KHCDNNEVLKALCVEAGWVVEEDGTTYRKGCKPLTGEIAGTSSRVTPYSSQNQSPLSSAF 120

Query: 112 PSPVPSYPT--------SPTRGDANN--PSSLLPFLRN-AIPSSLPPLRISNSAPVTPPL 160
            SP+PSY          SP+RG+ NN   S+  PFLRN  IPSSLP LRISNS PVTPP+
Sbjct: 121 QSPIPSYQVSPSSSSFPSPSRGEPNNNISSTFFPFLRNGGIPSSLPSLRISNSCPVTPPV 180

Query: 161 SSPTKS--KPIPNWES-------MAKESMSALNYPFYAISAPASPIHRQLYAPAATIHEC 211
           SSPT    KP+PNWES       +AK+SM++ NYPFYA+SAPASP HRQ + P ATI EC
Sbjct: 181 SSPTSKNPKPLPNWESIAKQSMAIAKQSMASFNYPFYAVSAPASPTHRQFHTP-ATIPEC 239

Query: 212 DESDTSTVDSGHWISFQKFAP----SASGVPTSPTFNLVRHVAQPSFAN-EALKEKGRGS 266
           DESD+STVDSGHWISFQKFA     SAS VPTSPTFNLV+   Q    N  A +E G+ S
Sbjct: 240 DESDSSTVDSGHWISFQKFAQQQPFSASMVPTSPTFNLVKPAPQQMSPNTTAFQEIGQSS 299

Query: 267 EFQFESAPVKPWEGEKIHDVGMEDLDLSLGIGKAQ 301
           EF+FE++ VKPWEGE+IHDVGMEDL+L+LG GKA+
Sbjct: 300 EFKFENSQVKPWEGERIHDVGMEDLELTLGNGKAR 334

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|21592457|gb|AAM64408.1| unknown [Arabidopsis thaliana]

 Score =  379 bits (972), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 232/336 (69%), Positives = 263/336 (78%), Gaps = 35/336 (10%)

Query: 1   MTSDGATSTSAA--------RRKPTWRERENNRRRERRRRAIAAKIYTGLRAQGNYNLPK 52
           MTSDGATSTSAA        RRKP+WRERENNRRRERRRRA+AAKIYTGLRAQGNYNLPK
Sbjct: 1   MTSDGATSTSAAAAAAAMATRRKPSWRERENNRRRERRRRAVAAKIYTGLRAQGNYNLPK 60

Query: 53  HCDNNEVLKALCAEAGWVVEEDGTTYRKGTRPPPIDIASTSARVTPYSSQNPSPLSSSFP 112
           HCDNNEVLKALC+EAGWVVEEDGTTYRKG +P P D+A +S+R TPYSS N SPLSS+F 
Sbjct: 61  HCDNNEVLKALCSEAGWVVEEDGTTYRKGHKPLPGDMAGSSSRATPYSSHNQSPLSSTFD 120

Query: 113 SPVPSYPTSPTR---------GDANNPSSLLPFLRN-AIPSSLPPLRISNSAPVTPPLSS 162
           SP+ SY  SP+          GD +N S++ PFLRN  IPSSLPPLRISNSAPVTPP+SS
Sbjct: 121 SPILSYQVSPSSSSFPSPSRVGDPHNISTIFPFLRNGGIPSSLPPLRISNSAPVTPPVSS 180

Query: 163 PT--KSKPIPNWESM--------AKESMSALNYPFYAISAPASPI-HRQLYAPAATIHEC 211
           PT   SKP+P WES         AK+SM++LNYPFYA+SAPASP  HRQ +AP ATI EC
Sbjct: 181 PTSRNSKPLPTWESFTKQSMSMAAKQSMTSLNYPFYAVSAPASPTHHRQFHAP-ATIPEC 239

Query: 212 DESDTSTVDSGHWISFQKFAP----SASGVPTSPTFNLVRHVAQPSFANE-ALKEKGRGS 266
           DESD+STVDSGHWISFQKFA     SAS VPTSPTFNLV+   Q    N  A++E G+ S
Sbjct: 240 DESDSSTVDSGHWISFQKFAQQQPFSASMVPTSPTFNLVKPAPQQLSPNTAAIQEIGQSS 299

Query: 267 EFQFESAPVKPWEGEKIHDVGMEDLDLSLGIGKAQS 302
           EF+FE++ VKPWEGE+IHDV MEDL+L+LG GKA S
Sbjct: 300 EFKFENSQVKPWEGERIHDVAMEDLELTLGNGKAHS 335

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|312282823|dbj|BAJ34277.1| unnamed protein product [Thellungiella halophila]

 Score =  378 bits (971), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 236/336 (70%), Positives = 266/336 (79%), Gaps = 39/336 (11%)

Query: 1   MTSDGATSTSAA------RRKPTWRERENNRRRERRRRAIAAKIYTGLRAQGNYNLPKHC 54
           MTSDGATSTSAA      RRKP+WRERENNRRRERRRRA+AAKIYTGLRAQG+YNLPKHC
Sbjct: 1   MTSDGATSTSAAAAAAAARRKPSWRERENNRRRERRRRAVAAKIYTGLRAQGDYNLPKHC 60

Query: 55  DNNEVLKALCAEAGWVVEEDGTTYRKGTRPPPIDIASTSARVTPYSSQNPSPLSSSFPSP 114
           DNNEVLKALCAEAGWVVEEDGTTYRKG RP P +I  TS+RVTPYSSQN SPLSS+F SP
Sbjct: 61  DNNEVLKALCAEAGWVVEEDGTTYRKGCRPQPGEIGGTSSRVTPYSSQNQSPLSSAFQSP 120

Query: 115 VPSYPT--------SPTRGDANNP-SSLLPFLRN-AIPSSLPPLRISNSAPVTPPLS-SP 163
           +PSY          SP+RG+ANN  S+  PF+RN  IPSSLP LRISNS PVTPPLS SP
Sbjct: 121 IPSYQVSPSSSSFPSPSRGEANNNISTFFPFIRNGGIPSSLPSLRISNSCPVTPPLSTSP 180

Query: 164 TKS--KPIPNWES-------MAKESMSALNYPFYAISAPASPIHRQLYAPAATIHECDES 214
           T    KP+PNWES       +AK+SMS+ NYPFYA+SAPASP HR  + P ATI ECDES
Sbjct: 181 TSKNPKPLPNWESIAKQSMAIAKQSMSSFNYPFYAVSAPASPTHRPFHTP-ATIPECDES 239

Query: 215 DTSTVDSGHWISFQKFAP----SASGVPTSPTFNLVR-----HVAQPSFANEALKEKGRG 265
           D+STVDSGHWISFQKFA     SAS VPTSPTFNLV+     H++ P+ A  AL+E G+ 
Sbjct: 240 DSSTVDSGHWISFQKFAQQQPFSASMVPTSPTFNLVKPPAPQHMS-PNAA--ALQEIGQS 296

Query: 266 SEFQFESAPVKPWEGEKIHDVGMEDLDLSLGIGKAQ 301
           SEF+FE++ VKPWEGE+IHDVGMEDL+L+LG GKA 
Sbjct: 297 SEFKFENSQVKPWEGERIHDVGMEDLELTLGNGKAH 332

Source: Thellungiella halophila

Species: Eutrema halophilum

Genus: Eutrema

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|42571545|ref|NP_973863.1| protein brassinazole-resistant 2 [Arabidopsis thaliana] gi|332191714|gb|AEE29835.1| protein brassinazole-resistant 2 [Arabidopsis thaliana]

 Score =  377 bits (968), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 231/336 (68%), Positives = 262/336 (77%), Gaps = 35/336 (10%)

Query: 1   MTSDGATSTSAA--------RRKPTWRERENNRRRERRRRAIAAKIYTGLRAQGNYNLPK 52
           MTSDGATSTSAA        RRKP+WRERENNRRRERRRRA+AAKIYTGLRAQGNYNLPK
Sbjct: 23  MTSDGATSTSAAAAAAAMATRRKPSWRERENNRRRERRRRAVAAKIYTGLRAQGNYNLPK 82

Query: 53  HCDNNEVLKALCAEAGWVVEEDGTTYRKGTRPPPIDIASTSARVTPYSSQNPSPLSSSFP 112
           HCDNNEVLKALC+EAGWVVEEDGTTYRKG +P P D+A +S+R TPYSS N SPLSS+F 
Sbjct: 83  HCDNNEVLKALCSEAGWVVEEDGTTYRKGHKPLPGDMAGSSSRATPYSSHNQSPLSSTFD 142

Query: 113 SPVPSYPTSPTR---------GDANNPSSLLPFLRN-AIPSSLPPLRISNSAPVTPPLSS 162
           SP+ SY  SP+          GD +N S++ PFLRN  IPSSLPPLRISNSAPVTPP+SS
Sbjct: 143 SPILSYQVSPSSSSFPSPSRVGDPHNISTIFPFLRNGGIPSSLPPLRISNSAPVTPPVSS 202

Query: 163 PTKS--KPIPNWESM--------AKESMSALNYPFYAISAPASPI-HRQLYAPAATIHEC 211
           PT    KP+P WES         AK+SM++LNYPFYA+SAPASP  HRQ +AP ATI EC
Sbjct: 203 PTSRNPKPLPTWESFTKQSMSMAAKQSMTSLNYPFYAVSAPASPTHHRQFHAP-ATIPEC 261

Query: 212 DESDTSTVDSGHWISFQKFAP----SASGVPTSPTFNLVRHVAQPSFANE-ALKEKGRGS 266
           DESD+STVDSGHWISFQKFA     SAS VPTSPTFNLV+   Q    N  A++E G+ S
Sbjct: 262 DESDSSTVDSGHWISFQKFAQQQPFSASMVPTSPTFNLVKPAPQQLSPNTAAIQEIGQSS 321

Query: 267 EFQFESAPVKPWEGEKIHDVGMEDLDLSLGIGKAQS 302
           EF+FE++ VKPWEGE+IHDV MEDL+L+LG GKA S
Sbjct: 322 EFKFENSQVKPWEGERIHDVAMEDLELTLGNGKAHS 357

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18394728|ref|NP_564081.1| protein brassinazole-resistant 2 [Arabidopsis thaliana] gi|42571547|ref|NP_973864.1| protein brassinazole-resistant 2 [Arabidopsis thaliana] gi|42571549|ref|NP_973865.1| protein brassinazole-resistant 2 [Arabidopsis thaliana] gi|145323946|ref|NP_001077562.1| protein brassinazole-resistant 2 [Arabidopsis thaliana] gi|57012618|sp|Q9LN63.1|BZR2_ARATH RecName: Full=Protein BRASSINAZOLE-RESISTANT 2; AltName: Full=Protein 107; AltName: Full=Protein BIN2 SUBSTRATE 1; AltName: Full=Protein BRI1-EMS-SUPPRESSOR 1 gi|8778414|gb|AAF79422.1|AC025808_4 F18O14.7 [Arabidopsis thaliana] gi|18086446|gb|AAL57677.1| At1g19350/F18O14_4 [Arabidopsis thaliana] gi|20908096|tpg|DAA00023.1| TPA_exp: BZR2 [Arabidopsis thaliana] gi|332191713|gb|AEE29834.1| protein brassinazole-resistant 2 [Arabidopsis thaliana] gi|332191715|gb|AEE29836.1| protein brassinazole-resistant 2 [Arabidopsis thaliana] gi|332191716|gb|AEE29837.1| protein brassinazole-resistant 2 [Arabidopsis thaliana] gi|332191717|gb|AEE29838.1| protein brassinazole-resistant 2 [Arabidopsis thaliana]

 Score =  376 bits (966), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 231/336 (68%), Positives = 262/336 (77%), Gaps = 35/336 (10%)

Query: 1   MTSDGATSTSAA--------RRKPTWRERENNRRRERRRRAIAAKIYTGLRAQGNYNLPK 52
           MTSDGATSTSAA        RRKP+WRERENNRRRERRRRA+AAKIYTGLRAQGNYNLPK
Sbjct: 1   MTSDGATSTSAAAAAAAMATRRKPSWRERENNRRRERRRRAVAAKIYTGLRAQGNYNLPK 60

Query: 53  HCDNNEVLKALCAEAGWVVEEDGTTYRKGTRPPPIDIASTSARVTPYSSQNPSPLSSSFP 112
           HCDNNEVLKALC+EAGWVVEEDGTTYRKG +P P D+A +S+R TPYSS N SPLSS+F 
Sbjct: 61  HCDNNEVLKALCSEAGWVVEEDGTTYRKGHKPLPGDMAGSSSRATPYSSHNQSPLSSTFD 120

Query: 113 SPVPSYPTSPTR---------GDANNPSSLLPFLRN-AIPSSLPPLRISNSAPVTPPLSS 162
           SP+ SY  SP+          GD +N S++ PFLRN  IPSSLPPLRISNSAPVTPP+SS
Sbjct: 121 SPILSYQVSPSSSSFPSPSRVGDPHNISTIFPFLRNGGIPSSLPPLRISNSAPVTPPVSS 180

Query: 163 PTKS--KPIPNWESM--------AKESMSALNYPFYAISAPASPI-HRQLYAPAATIHEC 211
           PT    KP+P WES         AK+SM++LNYPFYA+SAPASP  HRQ +AP ATI EC
Sbjct: 181 PTSRNPKPLPTWESFTKQSMSMAAKQSMTSLNYPFYAVSAPASPTHHRQFHAP-ATIPEC 239

Query: 212 DESDTSTVDSGHWISFQKFAP----SASGVPTSPTFNLVRHVAQPSFANE-ALKEKGRGS 266
           DESD+STVDSGHWISFQKFA     SAS VPTSPTFNLV+   Q    N  A++E G+ S
Sbjct: 240 DESDSSTVDSGHWISFQKFAQQQPFSASMVPTSPTFNLVKPAPQQLSPNTAAIQEIGQSS 299

Query: 267 EFQFESAPVKPWEGEKIHDVGMEDLDLSLGIGKAQS 302
           EF+FE++ VKPWEGE+IHDV MEDL+L+LG GKA S
Sbjct: 300 EFKFENSQVKPWEGERIHDVAMEDLELTLGNGKAHS 335

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	302
TAIR|locus:2101719	276	BEH1 "BES1/BZR1 homolog 1" [Ar	0.768	0.840	0.441	6.1e-52
TAIR|locus:2016472	357	BES1 "BRI1-EMS-SUPPRESSOR 1" [	0.586	0.495	0.605	5.8e-50
TAIR|locus:2037279	336	BZR1 "BRASSINAZOLE-RESISTANT 1	0.592	0.532	0.581	1.1e-48
TAIR|locus:2117154	284	BEH3 "BES1/BZR1 homolog 3" [Ar	0.443	0.471	0.440	5.8e-36
TAIR|locus:2037518	325	BEH4 "BES1/BZR1 homolog 4" [Ar	0.281	0.261	0.586	4.4e-31
TAIR|locus:2158455	689	BMY2 "beta-amylase 2" [Arabido	0.172	0.075	0.519	2.3e-07
TAIR|locus:2050720	691	BAM7 "beta-amylase 7" [Arabido	0.172	0.075	0.545	1.2e-06

TAIR|locus:2101719 BEH1 "BES1/BZR1 homolog 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 450 (163.5 bits), Expect = 6.1e-52, Sum P(2) = 6.1e-52
 Identities = 110/249 (44%), Positives = 135/249 (54%)

Query:     1 MTSDGATSTSAARRKPTWXXXXXXXXXXXXXXAIAAKIYTGLRAQGNYNLPKHCDNNEVL 60
             MT+ G  ST+A  R PTW              AIAAKI+TGLR+QGNY LPKHCDNNEVL
Sbjct:     1 MTASGGGSTAATGRMPTWKERENNKKRERRRRAIAAKIFTGLRSQGNYKLPKHCDNNEVL 60

Query:    61 KALCAEAGWVVEEDGTTYRKGTRPPPIDIASTSARVTXXXXXXXXXXXXXXXXXXXXXXX 120
             KALC EAGW+V EDGTTYRKG+RP    +  +S +++                       
Sbjct:    61 KALCLEAGWIVHEDGTTYRKGSRPTETTVPCSSIQLSPQSSAFQSPIPSYQASPSSSSYP 120

Query:   121 XXTRGDANNPSS-LLPFLRNAIPS-SLPPLRISNSAXXXXXXXXXXXXXXXX-NWESMAK 177
               TR D N  S+ L+P+L+N   S +L PLRISNSA                  W+S   
Sbjct:   121 SPTRFDPNQSSTYLIPYLQNLASSGNLAPLRISNSAPVTPPISSPRRSNPRLPRWQSS-- 178

Query:   178 ESMSALNYPFYAISAPASPIHRQLYAPAATIHECDESDTSTVDSGHWISFQKFAPSASGV 237
                   N+P   +SAP+SP  R+L+    +I ECDESD STVDS  W +FQ    S +  
Sbjct:   179 ------NFP---VSAPSSPT-RRLHH-YTSIPECDESDVSTVDSCRWGNFQSVNVSQT-C 226

Query:   238 PTSPTFNLV 246
             P SPTFNLV
Sbjct:   227 PPSPTFNLV 235

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0005773 "vacuole" evidence=IDA

TAIR|locus:2016472 BES1 "BRI1-EMS-SUPPRESSOR 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 520 (188.1 bits), Expect = 5.8e-50, P = 5.8e-50
 Identities = 118/195 (60%), Positives = 137/195 (70%)

Query:   125 GDANNPSSLLPFLRNA-IPSSLPPLRISNSAXXX--XXXXXXXXXXXXXNWESM------ 175
             GD +N S++ PFLRN  IPSSLPPLRISNSA                   WES       
Sbjct:   164 GDPHNISTIFPFLRNGGIPSSLPPLRISNSAPVTPPVSSPTSRNPKPLPTWESFTKQSMS 223

Query:   176 --AKESMSALNYPFYAISAPASPIH-RQLYAPAATIHECDESDTSTVDSGHWISFQKFA- 231
               AK+SM++LNYPFYA+SAPASP H RQ +APA TI ECDESD+STVDSGHWISFQKFA 
Sbjct:   224 MAAKQSMTSLNYPFYAVSAPASPTHHRQFHAPA-TIPECDESDSSTVDSGHWISFQKFAQ 282

Query:   232 --P-SASGVPTSPTFNLVRHVAQPSFANEA-LKEKGRGSEFQFESAPVKPWEGEKIHDVG 287
               P SAS VPTSPTFNLV+   Q    N A ++E G+ SEF+FE++ VKPWEGE+IHDV 
Sbjct:   283 QQPFSASMVPTSPTFNLVKPAPQQLSPNTAAIQEIGQSSEFKFENSQVKPWEGERIHDVA 342

Query:   288 MEDLDLSLGIGKAQS 302
             MEDL+L+LG GKA S
Sbjct:   343 MEDLELTLGNGKAHS 357

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0005515 "protein binding" evidence=IPI

GO:0009742 "brassinosteroid mediated signaling pathway" evidence=IGI

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0003677 "DNA binding" evidence=IDA

TAIR|locus:2037279 BZR1 "BRASSINAZOLE-RESISTANT 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 508 (183.9 bits), Expect = 1.1e-48, P = 1.1e-48
 Identities = 114/196 (58%), Positives = 134/196 (68%)

Query:   123 TRGDANN--PSSLLPFLRNA-IPSSLPPLRISNSAXXX--XXXXXXXXXXXXXNWESMAK 177
             +RG+ NN   S+  PFLRN  IPSSLP LRISNS                   NWES+AK
Sbjct:   140 SRGEPNNNMSSTFFPFLRNGGIPSSLPSLRISNSCPVTPPVSSPTSKNPKPLPNWESIAK 199

Query:   178 ESMS-------ALNYPFYAISAPASPIHRQLYAPAATIHECDESDTSTVDSGHWISFQKF 230
             +SM+       + NYPFYA+SAPASP HR  +   ATI ECDESD+STVDSGHWISFQKF
Sbjct:   200 QSMAIAKQSMASFNYPFYAVSAPASPTHRHQFHTPATIPECDESDSSTVDSGHWISFQKF 259

Query:   231 A---P-SASGVPTSPTFNLVRHVAQPSFANEA-LKEKGRGSEFQFESAPVKPWEGEKIHD 285
             A   P SAS VPTSPTFNLV+   Q    N A  +E G+ SEF+FE++ VKPWEGE+IHD
Sbjct:   260 AQQQPFSASMVPTSPTFNLVKPAPQQMSPNTAAFQEIGQSSEFKFENSQVKPWEGERIHD 319

Query:   286 VGMEDLDLSLGIGKAQ 301
             VGMEDL+L+LG GKA+
Sbjct:   320 VGMEDLELTLGNGKAR 335

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0009742 "brassinosteroid mediated signaling pathway" evidence=IMP

GO:0003677 "DNA binding" evidence=IDA

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0005829 "cytosol" evidence=IDA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IDA

GO:0048316 "seed development" evidence=IMP

GO:0048481 "ovule development" evidence=IMP

TAIR|locus:2117154 BEH3 "BES1/BZR1 homolog 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 267 (99.0 bits), Expect = 5.8e-36, Sum P(3) = 5.8e-36
 Identities = 63/143 (44%), Positives = 74/143 (51%)

Query:    10 SAARRKPTWXXXXXXXXXXXXXXAIAAKIYTGLRAQGNYNLPKHCDNNEVLKALCAEAGW 69
             ++  R PTW              AIAAKI+ GLR  GN+ LPKHCDNNEVLKALC EAGW
Sbjct:     2 TSGTRTPTWKERENNKRRERRRRAIAAKIFAGLRIHGNFKLPKHCDNNEVLKALCNEAGW 61

Query:    70 VVEEDGTTYRKGTRPPP-IDI--ASTSARVTXXXXXXXXXXXXXXXXXXXXXXXXXTRGD 126
              VE+DGTTYRKG +P   +D+   STSA                              GD
Sbjct:    62 TVEDDGTTYRKGCKPMDRMDLMNGSTSASPCSSYQHSPRASYNPSPSSSSFPSPTNPFGD 121

Query:   127 ANNPSSLLPFLRNAI---PSSLP 146
             AN   SL+P+L+N     PS LP
Sbjct:   122 AN---SLIPWLKNLSSNSPSKLP 141

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0009414 "response to water deprivation" evidence=RCA

GO:0009737 "response to abscisic acid stimulus" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

TAIR|locus:2037518 BEH4 "BES1/BZR1 homolog 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 250 (93.1 bits), Expect = 4.4e-31, Sum P(3) = 4.4e-31
 Identities = 51/87 (58%), Positives = 58/87 (66%)

Query:    10 SAARRKPTWXXXXXXXXXXXXXXAIAAKIYTGLRAQGNYNLPKHCDNNEVLKALCAEAGW 69
             ++  R PTW              AIAAKI+TGLR  GNY LPKHCDNNEVLKALC EAGW
Sbjct:     2 TSGTRMPTWRERENNKRRERRRRAIAAKIFTGLRMYGNYELPKHCDNNEVLKALCNEAGW 61

Query:    70 VVEEDGTTYRKG-TRPPP-IDIASTSA 94
             +VE DGTTYRKG +RP   ++I   SA
Sbjct:    62 IVEPDGTTYRKGCSRPVERMEIGGGSA 88

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2158455 BMY2 "beta-amylase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 145 (56.1 bits), Expect = 2.3e-07, P = 2.3e-07
 Identities = 27/52 (51%), Positives = 35/52 (67%)

Query:    33 AIAAKIYTGLRAQGNYNLPKHCDNNEVLKALCAEAGWVVEEDGTTYRKGTRP 84
             AI +++  GLR  GN+ LP   D N+V+ AL  EAGW VE DGTTYR+  +P
Sbjct:   105 AITSRMLAGLRQYGNFPLPARADMNDVIAALAREAGWSVEADGTTYRQSQQP 156

GO:0000272 "polysaccharide catabolic process" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0016161 "beta-amylase activity" evidence=IEA;ISS;IDA

GO:0043169 "cation binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IDA

GO:0005634 "nucleus" evidence=IDA

GO:0048831 "regulation of shoot system development" evidence=IMP

TAIR|locus:2050720 BAM7 "beta-amylase 7" [Arabidopsis thaliana (taxid:3702)]

 Score = 139 (54.0 bits), Expect = 1.2e-06, P = 1.2e-06
 Identities = 30/55 (54%), Positives = 36/55 (65%)

Query:    33 AIAAKIYTGLRAQGNYNLPKHCDNNEVLKALCAEAGWVVEEDGTTY---RKGTRP 84
             AI A+I  GLR  GNYNL    D N+V+ AL  EAGWVV  DGTT+    +GT+P
Sbjct:    88 AITARILGGLRRHGNYNLRVRADINDVIAALAREAGWVVLPDGTTFPSKSQGTKP 142


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.312   0.127   0.381    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      302       247   0.00078  114 3  11 23  0.37    34
                                                     32  0.46    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  7
  No. of states in DFA:  603 (64 KB)
  Total size of DFA:  195 KB (2110 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  18.59u 0.10s 18.69t   Elapsed:  00:00:01
  Total cpu time:  18.59u 0.10s 18.69t   Elapsed:  00:00:01
  Start:  Sat May 11 07:59:12 2013   End:  Sat May 11 07:59:13 2013

GO:0000272 "polysaccharide catabolic process" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0016161 "beta-amylase activity" evidence=IEA;ISS;IDA

GO:0043169 "cation binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IDA

GO:0005634 "nucleus" evidence=IDA

GO:0048831 "regulation of shoot system development" evidence=IMP

GO:0010048 "vernalization response" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8S307	BZR1_ARATH	No assigned EC number	0.6865	0.9966	0.8958	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: eugene3.00400175 hypothetical protein (317 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	302
pfam05687	151	pfam05687, DUF822, Plant protein of unknown functi	3e-62
PLN02705	681	PLN02705, PLN02705, beta-amylase	1e-18
PLN02905	702	PLN02905, PLN02905, beta-amylase	4e-18
pfam04652	315	pfam04652, DUF605, Vta1 like	0.002

>gnl|CDD|218693 pfam05687, DUF822, Plant protein of unknown function (DUF822)

 Score =  193 bits (493), Expect = 3e-62
 Identities = 93/151 (61%), Positives = 108/151 (71%), Gaps = 14/151 (9%)

Query: 10  SAARRKPTWRERENNRRRERRRRAIAAKIYTGLRAQGNYNLPKHCDNNEVLKALCAEAGW 69
             + RKPTW+ERENN+RRERRRRAIAAKIY GLRA GNYNLPKHCDNNEVLKALC EAGW
Sbjct: 1   GGSGRKPTWKERENNKRRERRRRAIAAKIYAGLRAHGNYNLPKHCDNNEVLKALCREAGW 60

Query: 70  VVEEDGTTYRKGTRPP-PIDIASTSARVTPYSSQNPSPLSSSFPSPVPSYPT-------- 120
           VVE DGTTYRKG +P   ++ A +SA  +P SS   SP+SS+FPSPVPSY          
Sbjct: 61  VVEPDGTTYRKGCKPLERMEGAGSSATASPCSSYQLSPVSSAFPSPVPSYSASPASSSFP 120

Query: 121 SPTRGDANN---PSSLLPFLRN--AIPSSLP 146
           SP+  D+      +SLLP+L     + SSLP
Sbjct: 121 SPSSLDSIPISSAASLLPWLSVLSLVSSSLP 151

This family consists of the N terminal regions of several plant proteins of unknown function. Length = 151

>gnl|CDD|178307 PLN02705, PLN02705, beta-amylase

 Score = 85.8 bits (212), Expect = 1e-18
 Identities = 46/110 (41%), Positives = 60/110 (54%), Gaps = 8/110 (7%)

Query: 1   MTSDGATSTSAARRKPTWRERENNRRRERRRRAIAAKIYTGLRAQGNYNLPKHCDNNEVL 60
           ++S G        ++   +E+E  + RER RRAI +++  GLR  GN+ LP   D N+VL
Sbjct: 65  ISSGGGGGGGGKGKREREKEKERTKLRERHRRAITSRMLAGLRQYGNFPLPARADMNDVL 124

Query: 61  KALCAEAGWVVEEDGTTYRKGTRPPPIDIASTSARVTPYSSQNPSPLSSS 110
            AL  EAGW VE DGTTYR+   P P  + S   R         SPLSSS
Sbjct: 125 AALAREAGWTVEADGTTYRQS--PQPSHVGSFPVRSV------ESPLSSS 166

Length = 681

>gnl|CDD|178493 PLN02905, PLN02905, beta-amylase

 Score = 84.3 bits (208), Expect = 4e-18
 Identities = 57/143 (39%), Positives = 74/143 (51%), Gaps = 13/143 (9%)

Query: 5   GATSTSAARRKPTWRERENNRRRERRRRAIAAKIYTGLRAQGNYNLPKHCDNNEVLKALC 64
           G      +RR     E+E  + RER RRAI A+I  GLR  GNYNL    D N+V+ AL 
Sbjct: 71  GTPGGGGSRRSRPLEEKERTKLRERHRRAITARILAGLRRHGNYNLRVRADINDVIAALA 130

Query: 65  AEAGWVVEEDGTTY---RKGTRPP--PIDIASTSARVTPYSSQNPSP----LSSSFPSPV 115
            EAGWVV  DGTT+    +GTRP      +A+TS+     S Q P P    +SS + S V
Sbjct: 131 REAGWVVLPDGTTFPSRSQGTRPAGGTSAVAATSSSSHLVSQQTPPPSLRGVSSGYRSSV 190

Query: 116 PSYPTSPTRG---DANNPSSLLP 135
             Y     +G    A++P  + P
Sbjct: 191 -EYNACRMKGVFVPASSPYDVSP 212

Length = 702

>gnl|CDD|218191 pfam04652, DUF605, Vta1 like

 Score = 39.3 bits (92), Expect = 0.002
 Identities = 28/118 (23%), Positives = 39/118 (33%), Gaps = 11/118 (9%)

Query: 80  KGTRPPPIDIASTSARVTPYSSQNPSPLS-SSFPSPVPSYPTSPTRGDANNPSSLLPFLR 138
             + PP       S    P    +PS  S    PS   S    P+     NPS       
Sbjct: 183 SPSDPPSSSPGVPSFPSPPEDPSSPSDSSLPPAPSSFQSDTPPPSPESPTNPSPPPGPAA 242

Query: 139 NAIPSSLPPLRISNSAPVTPPLSSPTKSKPIPNW----ESMAKESMSALNYPFYAISA 192
              P       +S + P  P  S+     PI       +++AK    A  +  +AISA
Sbjct: 243 PPPPPVQQVPPLSTAKPTPPSASATP--APIGGITLDDDAIAK----AQKHAKWAISA 294

Vta1 (VPS20-associated protein 1) is a positive regulator of Vps4. Vps4 is an ATPase that is required in the multivesicular body (MVB) sorting pathway to dissociate the endosomal sorting complex required for transport (ESCRT). Vta1 promotes correct assembly of Vps4 and stimulates its ATPase activity through its conserved Vta1/SBP1/LIP5 region. Length = 315

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	302
PF05687	150	DUF822: Plant protein of unknown function (DUF822)	100.0
PLN02905	702	beta-amylase	100.0
PLN02705	681	beta-amylase	100.0
PF05687	150	DUF822: Plant protein of unknown function (DUF822)	82.24

>PF05687 DUF822: Plant protein of unknown function (DUF822); InterPro: IPR008540 This group of proteins contains members of the BZR1/LAT61 family of plant transcriptional repressors involved in controlling the response to Brassinosteroids (BRs)

Probab=100.00  E-value=2.2e-60  Score=406.58  Aligned_cols=132  Identities=66%  Similarity=1.090  Sum_probs=121.7

Q ss_pred             CCCccCCChHHHhhhHHHHHHHHHHHHHHHHhhhhcCCCCCCCCCChHHHHHHHHHHhCcEEcCCCccccCCCCCCC-CC
Q 022148           10 SAARRKPTWRERENNRRRERRRRAIAAKIYTGLRAQGNYNLPKHCDNNEVLKALCAEAGWVVEEDGTTYRKGTRPPP-ID   88 (302)
Q Consensus        10 ~~~~R~pt~rErEnnk~RERrRRAIaakIfaGLR~~gny~Lpk~~d~nevlkaL~~eaGw~ve~dGttyr~g~kp~~-~~   88 (302)
                      ++++|+||||||||||+|||||||||+|||+|||+||||+|||||||||||||||+||||+||+|||||||+|+|++ ++
T Consensus         1 ~~~~r~pt~kErEnnk~RERrRRAIaakIfaGLR~~Gny~Lp~~aD~NeVLkALc~eAGw~Ve~DGTtyr~~~~~~~~~~   80 (150)
T PF05687_consen    1 GSGGRRPTWKERENNKRRERRRRAIAAKIFAGLRAHGNYKLPKHADNNEVLKALCREAGWTVEPDGTTYRKGCKPPEPME   80 (150)
T ss_pred             CCCcccccHhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcCCHHHHHHHHHHhCCEEEccCCCeeccCCCCCcccc
Confidence            35689999999999999999999999999999999999999999999999999999999999999999999999984 99


Q ss_pred             cCCCCCccCCCCCCCCCCCCCCCCCCCCCCCC--------CCCCCCCCC---CCcchhhhhccC
Q 022148           89 IASTSARVTPYSSQNPSPLSSSFPSPVPSYPT--------SPTRGDANN---PSSLLPFLRNAI  141 (302)
Q Consensus        89 ~~g~s~~~spcSS~~pSp~sSsfpSp~~S~~~--------s~~~~~~~~---~ssLiPwLknl~  141 (302)
                      ++|.|+.++|||++++++.+++|+||..||+.        +|++.|...   .++|||||||+.
T Consensus        81 ~~g~s~~~sp~ss~~~~~~ss~~~sp~~s~~~s~~ss~~pSp~~~d~~~~~~~~~~~p~~~~~~  144 (150)
T PF05687_consen   81 IVGSSASASPCSSYQLSPNSSAFPSPVPSYQPSPSSSSFPSPSSLDSINNSSSSSLIPWLKNLS  144 (150)
T ss_pred             ccccCCCCCCcCCCcCCccccCcCCcccccCCCcCCCCCCCCcccccccccccccccchhhccc
Confidence            99999999999999999999999999888877        455666543   378999999983

BRs are plant hormones that play essential roles in growth and development. BZR1 binds directly to DNA repressing the synthesis of genes involved in BR synthesis. Phosphorylation of BZR1 by BIN1 targets BZR1 to the 20S proteosome, while dephosphorylation leads to nuclear accumulation of BZR1 [].

>PLN02905 beta-amylase

Probab=100.00  E-value=3.9e-38  Score=315.08  Aligned_cols=100  Identities=42%  Similarity=0.618  Sum_probs=89.1

Q ss_pred             CCCCCCCCccCCChHHHhhhHHHHHHHHHHHHHHHHhhhhcCCCCCCCCCChHHHHHHHHHHhCcEEcCCCccccCCCCC
Q 022148            5 GATSTSAARRKPTWRERENNRRRERRRRAIAAKIYTGLRAQGNYNLPKHCDNNEVLKALCAEAGWVVEEDGTTYRKGTRP   84 (302)
Q Consensus         5 g~~~g~~~~R~pt~rErEnnk~RERrRRAIaakIfaGLR~~gny~Lpk~~d~nevlkaL~~eaGw~ve~dGttyr~g~kp   84 (302)
                      |..+||+++|.|+||||||||+|||||||||+|||+|||+||||+||+|||+||||||||+||||+||+||||||++|+.
T Consensus        71 ~~~~~~~~~~~~~~~ere~~~~rer~rrai~~~i~~glr~~g~~~lp~~~d~n~v~~~l~~eag~~v~~dg~~y~~~~~~  150 (702)
T PLN02905         71 GTPGGGGSRRSRPLEEKERTKLRERHRRAITARILAGLRRHGNYNLRVRADINDVIAALAREAGWVVLPDGTTFPSRSQG  150 (702)
T ss_pred             CCCCCCccCCCCchhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCCcccchHHHHHHHHHhcCcEEcCCCCcccccCCC
Confidence            44567778999999999999999999999999999999999999999999999999999999999999999999965543


Q ss_pred             CCCCcCCCCCccCCCCCCCCC
Q 022148           85 PPIDIASTSARVTPYSSQNPS  105 (302)
Q Consensus        85 ~~~~~~g~s~~~spcSS~~pS  105 (302)
                      +. -..|+|+.+.+|+|++.-
T Consensus       151 ~~-~~~~~~~~~~~~~~~~~~  170 (702)
T PLN02905        151 TR-PAGGTSAVAATSSSSHLV  170 (702)
T ss_pred             CC-CCCCcccccccccccccc
Confidence            32 146788889999999863

>PLN02705 beta-amylase

Probab=100.00  E-value=7.9e-38  Score=312.19  Aligned_cols=90  Identities=41%  Similarity=0.722  Sum_probs=82.7

Q ss_pred             CCCCCCCCCCCccCCChHHHhhhHHHHHHHHHHHHHHHHhhhhcCCCCCCCCCChHHHHHHHHHHhCcEEcCCCccccCC
Q 022148            2 TSDGATSTSAARRKPTWRERENNRRRERRRRAIAAKIYTGLRAQGNYNLPKHCDNNEVLKALCAEAGWVVEEDGTTYRKG   81 (302)
Q Consensus         2 t~~g~~~g~~~~R~pt~rErEnnk~RERrRRAIaakIfaGLR~~gny~Lpk~~d~nevlkaL~~eaGw~ve~dGttyr~g   81 (302)
                      +.||||||++.+|.|+||||||||+|||||||||+|||+|||+||||+||+|||+||||||||+||||+||+||||||++
T Consensus        66 ~~~~~~~~~~~~~~~~~~e~e~~~~rer~rrai~~ki~aglr~~g~~~lp~~~d~n~vl~al~~eagw~v~~dg~~yr~~  145 (681)
T PLN02705         66 SSGGGGGGGGKGKREREKEKERTKLRERHRRAITSRMLAGLRQYGNFPLPARADMNDVLAALAREAGWTVEADGTTYRQS  145 (681)
T ss_pred             cCCCCCCCCCCCCCcchhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCCCcccchHHHHHHHHHhcCcEEcCCCCcccCC
Confidence            45666666678999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCcCC
Q 022148           82 TRPPPIDIAS   91 (302)
Q Consensus        82 ~kp~~~~~~g   91 (302)
                      ++|..+...+
T Consensus       146 ~~~~~~~~~~  155 (681)
T PLN02705        146 PQPSHVGSFP  155 (681)
T ss_pred             CCCccccccc
Confidence            9998655444

>PF05687 DUF822: Plant protein of unknown function (DUF822); InterPro: IPR008540 This group of proteins contains members of the BZR1/LAT61 family of plant transcriptional repressors involved in controlling the response to Brassinosteroids (BRs)

Probab=82.24  E-value=1.3  Score=39.37  Aligned_cols=35  Identities=40%  Similarity=0.446  Sum_probs=29.4

Q ss_pred             CcCCCCCccCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 022148           88 DIASTSARVTPYSSQNPSPLSSSFPSPVPSYPTSP  122 (302)
Q Consensus        88 ~~~g~s~~~spcSS~~pSp~sSsfpSp~~S~~~s~  122 (302)
                      .....++..+||.+|+++|.+|+||||.+..+...
T Consensus        96 ~~~~ss~~~sp~~s~~~s~~ss~~pSp~~~d~~~~  130 (150)
T PF05687_consen   96 LSPNSSAFPSPVPSYQPSPSSSSFPSPSSLDSINN  130 (150)
T ss_pred             CCccccCcCCcccccCCCcCCCCCCCCcccccccc
Confidence            34567888999999999999999999998776543

BRs are plant hormones that play essential roles in growth and development. BZR1 binds directly to DNA repressing the synthesis of genes involved in BR synthesis. Phosphorylation of BZR1 by BIN1 targets BZR1 to the 20S proteosome, while dephosphorylation leads to nuclear accumulation of BZR1 [].

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	302
1twf_A	1733	B220, DNA-directed RNA polymerase II largest subun	5e-05

>1twf_A B220, DNA-directed RNA polymerase II largest subunit; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: e.29.1.2 PDB: 1i3q_A 1i6h_A 1k83_A* 1nik_A 1nt9_A 1pqv_A 1r5u_A 1r9s_A* 1r9t_A* 1sfo_A* 1twa_A* 1twc_A* 1i50_A* 1twg_A* 1twh_A* 1wcm_A 1y1v_A 1y1w_A 1y1y_A 1y77_A* ... Length = 1733

 Score = 43.9 bits (103), Expect = 5e-05
 Identities = 43/187 (22%), Positives = 64/187 (34%), Gaps = 18/187 (9%)

Query: 73   EDGTTYRKGTRPPPIDIASTSARVTPYSSQNPSPLSSSFPSPVPSY-PTSPTRGDANNPS 131
            + G+             A      +P+ +   +P S  F    P + PTSP      +P+
Sbjct: 1497 DSGSNDAMAGGFTAYGGADYGEATSPFGAYGEAPTSPGFGVSSPGFSPTSP----TYSPT 1552

Query: 132  SLLPFLRNAIPSSLPPLRISNSAPVTP--PLSSPTKSKPIPNWESMAKESMSALNYPFYA 189
            S      +   S   P     S   +P  P  SPT     P   S +    S    P   
Sbjct: 1553 SPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT--SPSYSPTSPSYSPTSP 1610

Query: 190  ISAPASPI---HRQLYAPAATIHECDESDTSTVDSGHWISFQKFAPSASGVPTSPTFNLV 246
              +P SP        Y+P +  +    S TS   S    S+   +PS S  PTSP ++  
Sbjct: 1611 SYSPTSPSYSPTSPSYSPTSPSY----SPTSPSYSPTSPSYSPTSPSYS--PTSPAYSPT 1664

Query: 247  RHVAQPS 253
                 P+
Sbjct: 1665 SPSYSPT 1671

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	302
d1vjoa_	377	Alanine-glyoxylate aminotransferase {Cyanobacteria	85.22

>d1vjoa_ c.67.1.3 (A:) Alanine-glyoxylate aminotransferase {Cyanobacteria (Nostoc sp. pcc 7120) [TaxId: 103690]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Alanine-glyoxylate aminotransferase
species: Cyanobacteria (Nostoc sp. pcc 7120) [TaxId: 103690]

Probab=85.22  E-value=0.72  Score=37.15  Aligned_cols=53  Identities=19%  Similarity=0.190  Sum_probs=40.7

Q ss_pred             HhhhHHHHHHHHHHHHHHHHhhhhcCCC---------------CCCCCCChHHHHHHHHHHhCcEEcC
Q 022148           21 RENNRRRERRRRAIAAKIYTGLRAQGNY---------------NLPKHCDNNEVLKALCAEAGWVVEE   73 (302)
Q Consensus        21 rEnnk~RERrRRAIaakIfaGLR~~gny---------------~Lpk~~d~nevlkaL~~eaGw~ve~   73 (302)
                      .+..+.++++.+..+.+++..|...|.+               .+|+..|..+|.+.|.++.|..|-.
T Consensus       274 ~~g~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~rs~~v~~~~~p~~~~~~~l~~~L~~~~gI~v~~  341 (377)
T d1vjoa_         274 QEGLANCWQRHQKNVEYLWERLEDIGLSLHVEKEYRLPTLTTVCIPDGVDGKAVARRLLNEHNIEVGG  341 (377)
T ss_dssp             HHCHHHHHHHHHHHHHHHHHHHHHTTCCBSSCGGGBCSSEEEEECCTTCCHHHHHHHHHHHHCEECEE
T ss_pred             hcCchHHHHHHHHHhhhhhhhhhccCceeecChHhcCCeEEEEECCCCCCHHHHHHHHHhcCCEEEec
Confidence            3445667777778888899998877753               3556778899999999999998843