Citrus Sinensis ID: 022165

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-

MGGLCPLKFVLFVSLASVLVPGAWGWSKEGHIMTCRIAQSLLEPDAAHAVENLLPQHVNGDLSALCVWPDQVRHWYRYRWTSPLHFIDTPDDACTYEFSRDCHDTHGKKNMCIVGAIRNFTSQLLHYREGSSDRRHNMTEALLFLSHFMGDVHQPMHVGFTSDEGGNTIELRWFRHKSNLHHVWDREIILTALADYYDKDTELLLQDIVANFTDGVWHDDVSSWKDCDNLMKCPNKYATESINMACKWGYKGVTPGETLADDYFNSRMPIVMKRIAQGGIRLAMFLNRIFSDSDEEFAAAT

cccccHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHcccHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHcccccccccccccccccccEEEEEcccccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHccccccccccccHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHccc

***LCPLKFVLFVSLASVLVPGAWGWSKEGHIMTCRIAQSLLEPDAAHAVENLLPQHVNGDLSALCVWPDQVRHWYRYRWTSPLHFIDTPDDACTYEFSRDCHDTHGKKNMCIVGAIRNFTSQLLHYREGSSDRRHNMTEALLFLSHFMGDVHQPMHVGFTSDEGGNTIELRWFRHKSNLHHVWDREIILTALADYYDKDTELLLQDIVANFTDGVWHDDVSSWKDCDNLMKCPNKYATESINMACKWGYKGVTPGETLADDYFNSRMPIVMKRIAQGGIRLAMFLNRIF***********

xxxxxxxxxHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx

SSSSSSSSSSSSSSSSSSSSSSSSSxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
Endonuclease 1	Hydrolyzes only single stranded DNA and RNA without apparent specificity for bases during senescence. Endonuclease that recognizes and cleaves all types of mismatches with high efficiency, including heteroduplex double-stranded DNA. Maybe involved in programmed cell death (PCD) and senescence.	confident	Q9SXA6

Prediction of Enzyme Commission Number

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3SNG, chain A
Confidence level:very confident
Coverage over the Query: 26-292
View the alignment between query and template
View the model in PyMOL