Citrus Sinensis ID: 022165

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-
Protein Sequence
MGGLCPLKFVLFVSLASVLVPGAWGWSKEGHIMTCRIAQSLLEPDAAHAVENLLPQHVNGDLSALCVWPDQVRHWYRYRWTSPLHFIDTPDDACTYEFSRDCHDTHGKKNMCIVGAIRNFTSQLLHYREGSSDRRHNMTEALLFLSHFMGDVHQPMHVGFTSDEGGNTIELRWFRHKSNLHHVWDREIILTALADYYDKDTELLLQDIVANFTDGVWHDDVSSWKDCDNLMKCPNKYATESINMACKWGYKGVTPGETLADDYFNSRMPIVMKRIAQGGIRLAMFLNRIFSDSDEEFAAAT
Secondary Structure (PSIPRED)
cccccHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHcccHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHcccccccccccccccccccEEEEEcccccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHccccccccccccHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHccc
Secondary Structure Prediction (SSPRO)
cccHHHHHHHHHHHHHHHccHHHHHccHHHHHHHHHHHHHHccHHHHHHHHHHccccccccHHHHcccHHHHccccccccccccEEEcccccccccccccccccccccccccHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHcccHHHccccccccccEEEEEEcccccccHHHccHHHHHHHHcccccccHHHHHHHHHHHccccccHHHHHHHHccccccccHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccc
Coil and Loop (DISEMBL)
MGGLCPLKFVLFVSLASVlvpgawgwskeghIMTCRIAqsllepdaAHAVEnllpqhvngdlsalcvwpdqvrhwyryrwtsplhfidtpddactyefsrdchdthgkknmCIVGAIRNFTSQLLhyregssdrrHNMTEALLFLSHfmgdvhqpmhvgftsdeggntIELRWFRHKSNLHHVWDREIILTALADYYDKDTELLLQDIVANFtdgvwhddvsswkdcdnlmkcpnkyaTESINMAckwgykgvtpgetladdyfnsrMPIVMKRIAQGGIRLAMFLNRIFSDSDEEFAAAT
Flexible Loop (DISEMBL)
MGGLCPLKFVLFVSLASVLVPGAWGWSKEGHIMTCRIAQSLLEPDAAHAVENLLPQHVNGDLSALCVWPDQVRHWYRYRWTSPLHFIDTPDDACTYEFSRDCHDTHGKKNMCIVGAIRNFTSQLLHYREGSSDRRHNMTEALLFLSHFMGDVHQPMHVGFTSDEGGNTIELRWFRHKSNLHHVWDREIILTALADYYDKDTELLLQDIVANFTDGVWHDDVSSWKDCDNLMKCPNKYATESINMACKWGYKGVTPGETLADDYFNSRMPIVMKRIAQGGIRLAMFLNRIFSDSDEEFAAAT
Low Complexity Region (SEG)
MGGLCPlkfvlfvslasvlvPGAWGWSKEGHIMTCRIAQSLLEPDAAHAVENLLPQHVNGDLSALCVWPDQVRHWYRYRWTSPLHFIDTPDDACTYEFSRDCHDTHGKKNMCIVGAIRNFTSQLLHYREGSSDRRHNMTEALLFLSHFMGDVHQPMHVGFTSDEGGNTIELRWFRHKSNLHHVWDREIILTALADYYDKDTELLLQDIVANFTDGVWHDDVSSWKDCDNLMKCPNKYATESINMACKWGYKGVTPGETLADDYFNSRMPIVMKRIAQGGIRLAMFLNRIFSDSDEEFAAAT
Disordered region (IsUnstruct)
***LCPLKFVLFVSLASVLVPGAWGWSKEGHIMTCRIAQSLLEPDAAHAVENLLPQHVNGDLSALCVWPDQVRHWYRYRWTSPLHFIDTPDDACTYEFSRDCHDTHGKKNMCIVGAIRNFTSQLLHYREG*****HNMTEALLFLSHFMGDVHQPMHVGFTSDEGGNTIELRWFRHKSNLHHVWDREIILTALADYYDKDTELLLQDIVANFTDGVWHDDVSSWKDCDNLMKCPNKYATESINMACKWGYKGVTPGETLADDYFNSRMPIVMKRIAQGGIRLAMFLNRIF***********
Disordered Region (DISOPRED)
*****PL*FVLFVSLASVLVPGAWGWSKEGHIMTCRIAQSLLEPDAAHAVENLLPQHVNGDLSALCVWPDQVRHWYRYRWTSPLHFIDTPDDACTYEFSRDCHDTHGKKNMCIVGAIRNFTSQLLHYREGSSDRRHNMTEALLFLSHFMGDVHQPMHVGFTSDEGGNTIELRWFRHKSNLHHVWDREIILTALADYYDKDTELLLQDIVANFTDGVWHDDVSSWKDCDNLMKCPNKYATESINMACKWGYKGVTPGETLADDYFNSRMPIVMKRIAQGGIRLAMFLNRIF***********
Disordered Region (DISEMBL)
MGGLCPLKFVLFVSLASVLVPGAWGWSKEGHIMTCRIAQSLLEPDAAHAVENLLPQHVNGDLSALCVWPDQVRHWYRYRWTSPLHFIDTPDDACTYEFSRDCHDTHGKKNMCIVGAIRNFTSQLLHYREGSSDRRHNMTEALLFLSHFMGDVHQPMHVGFTSDEGGNTIELRWFRHKSNLHHVWDREIILTALADYYDKDTELLLQDIVANFTDGVWHDDVSSWKDCDNLMKCPNKYATESINMACKWGYKGVTPGETLADDYFNSRMPIVMKRIAQGGIRLAMFLNRIFSDS********
Disordered Region (DISPRO)
*GGLCPLKFVLFVSLASVLVPGAWGWSKEGHIMTCRIAQSLLEPDAAHAVENLLPQHVNGDLSALCVWPDQVRHWYRYRWTSPLHFIDTPDDACTYEFSRDCHDTHGKKNMCIVGAIRNFTSQLLHYREGSSDRRHNMTEALLFLSHFMGDVHQPMHVGFTSDEGGNTIELRWFRHKSNLHHVWDREIILTALADYYDKDTELLLQDIVANFTDGVWHDDVSSWKDCDNLMKCPNKYATESINMACKWGYKGVTPGETLADDYFNSRMPIVMKRIAQGGIRLAMFLNRIFSDS********
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MGGLCPLKFVLFVSLASVLVPGAWGWSKEGHIMTCRIAQSLLEPDAAHAVENLLPQHVNGDLSALCVWPDQVRHWYRYRWTSPLHFIDTPDDACTYEFSRDCHDTHGKKNMCIVGAIRNFTSQLLHYREGSSDRRHNMTEALLFLSHFMGDVHQPMHVGFTSDEGGNTIELRWFRHKSNLHHVWDREIILTALADYYDKDTELLLQDIVANFTDGVWHDDVSSWKDCDNLMKCPNKYATESINMACKWGYKGVTPGETLADDYFNSRMPIVMKRIAQGGIRLAMFLNRIFSDSDEEFAAAT
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	301	2.2.26 [Sep-21-2011]
Q9SXA6	305	Endonuclease 1 OS=Arabido	yes	no	0.906	0.895	0.739	1e-127
F4JJL0	299	Endonuclease 4 OS=Arabido	no	no	0.923	0.929	0.555	1e-92
Q9C9G4	290	Endonuclease 2 OS=Arabido	no	no	0.887	0.920	0.540	7e-87
F4JJL3	296	Endonuclease 5 OS=Arabido	no	no	0.936	0.952	0.513	3e-82
Q8LDW6	294	Endonuclease 3 OS=Arabido	no	no	0.920	0.942	0.494	3e-79
P24504	270	Nuclease PA3 OS=Penicilli	N/A	no	0.827	0.922	0.284	9e-23
P24021	287	Nuclease S1 OS=Aspergillu	no	no	0.897	0.940	0.262	2e-22
P24289	270	Nuclease P1 OS=Penicilliu	N/A	no	0.827	0.922	0.284	3e-22

>sp|Q9SXA6|ENDO1_ARATH Endonuclease 1 OS=Arabidopsis thaliana GN=ENDO1 PE=1 SV=1

 Score =  455 bits (1171), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 202/273 (73%), Positives = 241/273 (88%)

Query: 20  VPGAWGWSKEGHIMTCRIAQSLLEPDAAHAVENLLPQHVNGDLSALCVWPDQVRHWYRYR 79
           V     WSKEGHI+TCRIAQ+LLE   AH VENLLP +V GDLSALCVWPDQ+RHWY+YR
Sbjct: 23  VSSVRSWSKEGHILTCRIAQNLLEAGPAHVVENLLPDYVKGDLSALCVWPDQIRHWYKYR 82

Query: 80  WTSPLHFIDTPDDACTYEFSRDCHDTHGKKNMCIVGAIRNFTSQLLHYREGSSDRRHNMT 139
           WTS LH+IDTPD AC+YE+SRDCHD HG K+MC+ GAI+NFTSQL HY EG+SDRR+NMT
Sbjct: 83  WTSHLHYIDTPDQACSYEYSRDCHDQHGLKDMCVDGAIQNFTSQLQHYGEGTSDRRYNMT 142

Query: 140 EALLFLSHFMGDVHQPMHVGFTSDEGGNTIELRWFRHKSNLHHVWDREIILTALADYYDK 199
           EALLFLSHFMGD+HQPMHVGFTSDEGGNTI+LRW++HKSNLHHVWDREIILTAL + YDK
Sbjct: 143 EALLFLSHFMGDIHQPMHVGFTSDEGGNTIDLRWYKHKSNLHHVWDREIILTALKENYDK 202

Query: 200 DTELLLQDIVANFTDGVWHDDVSSWKDCDNLMKCPNKYATESINMACKWGYKGVTPGETL 259
           + +LL +D+  N T+G+WHDD+SSW +C++L+ CP+KYA+ESI +ACKWGYKGV  GETL
Sbjct: 203 NLDLLQEDLEKNITNGLWHDDLSSWTECNDLIACPHKYASESIKLACKWGYKGVKSGETL 262

Query: 260 ADDYFNSRMPIVMKRIAQGGIRLAMFLNRIFSD 292
           +++YFN+R+PIVMKRI QGG+RLAM LNR+FSD
Sbjct: 263 SEEYFNTRLPIVMKRIVQGGVRLAMILNRVFSD 295

Hydrolyzes only single stranded DNA and RNA without apparent specificity for bases during senescence. Endonuclease that recognizes and cleaves all types of mismatches with high efficiency, including heteroduplex double-stranded DNA. Maybe involved in programmed cell death (PCD) and senescence.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 1EC: .EC: 3EC: 0EC: .EC: 1

>sp|F4JJL0|ENDO4_ARATH Endonuclease 4 OS=Arabidopsis thaliana GN=ENDO4 PE=3 SV=1

 Score =  339 bits (870), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 156/281 (55%), Positives = 205/281 (72%), Gaps = 3/281 (1%)

Query: 13  VSLASVLVPGAWGWSKEGHIMTCRIAQSLLEPDAAHAVENLLPQHVNGDLSALCVWPDQV 72
           V + + L+ GA  W KEGH   C+IA+S  E +   AV+ LLP+  +GDL+++C WPD++
Sbjct: 12  VLVLTQLINGALCWGKEGHYTVCKIAESYFEEETVAAVKKLLPKSADGDLASVCSWPDEI 71

Query: 73  RHWYRYRWTSPLHFIDTPDDACTYEFSRDCHDTHGKKNMCIVGAIRNFTSQLLHYREGSS 132
           +H +++RWTSPLH++DTPD  C YE+ RDCHDTH  ++ C+ GAI N+T QL+   E S 
Sbjct: 72  KHHWQWRWTSPLHYVDTPDYRCNYEYCRDCHDTHKNQDRCVTGAIFNYTMQLMSASENSD 131

Query: 133 DRRH-NMTEALLFLSHFMGDVHQPMHVGFTSDEGGNTIELRWFRHKSNLHHVWDREIILT 191
              H N+TEAL+FLSHF+GD+HQP+HVGF  DEGGNTI +RW+R K+NLHHVWD  II +
Sbjct: 132 TIVHYNLTEALMFLSHFIGDIHQPLHVGFLGDEGGNTITVRWYRRKTNLHHVWDNMIIES 191

Query: 192 ALADYYDKDTELLLQDIVANFTDGVWHDDVSSWKDCD-NLMKCPNKYATESINMACKWGY 250
           AL  YY+K   L+++ + AN T+  W +DV  W+ C  N   CPN YA+ESIN+ACK+ Y
Sbjct: 192 ALKTYYNKSLPLMIEALQANLTND-WSNDVPLWESCQLNQTACPNPYASESINLACKYAY 250

Query: 251 KGVTPGETLADDYFNSRMPIVMKRIAQGGIRLAMFLNRIFS 291
           +  TPG TL DDYF SR+PIV KR+AQGGIRLA  LNRIFS
Sbjct: 251 RNATPGTTLGDDYFLSRLPIVEKRLAQGGIRLAATLNRIFS 291

Probable endonuclease (By similarity). Can not hydrolyze single stranded DNA and does not cleave mismatches.

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: 0

EC: .

EC: 1

>sp|Q9C9G4|ENDO2_ARATH Endonuclease 2 OS=Arabidopsis thaliana GN=ENDO2 PE=2 SV=1

 Score =  320 bits (820), Expect = 7e-87,   Method: Compositional matrix adjust.
 Identities = 147/272 (54%), Positives = 195/272 (71%), Gaps = 5/272 (1%)

Query: 20  VPGAWGWSKEGHIMTCRIAQSLLEPDAAHAVENLLPQHVNGDLSALCVWPDQVRHWYRYR 79
            P   GW KEGH + C+IAQ+ L+  AA AV+ LLP+   GDLS+LC+W D+V+  +RY 
Sbjct: 22  APNIHGWGKEGHEIICKIAQTRLDETAAKAVKELLPESAEGDLSSLCLWADRVK--FRYH 79

Query: 80  WTSPLHFIDTPDDACTYEFSRDCHDTHGKKNMCIVGAIRNFTSQLLHYR-EGSSDRRHNM 138
           W+SPLH+I+TPD AC+Y+++RDC D  G+K  C+ GAI N+T+QLL Y+   SS  ++N+
Sbjct: 80  WSSPLHYINTPD-ACSYQYNRDCKDESGEKGRCVAGAIYNYTTQLLSYKTAASSQSQYNL 138

Query: 139 TEALLFLSHFMGDVHQPMHVGFTSDEGGNTIELRWFRHKSNLHHVWDREIILTALADYYD 198
           TEALLF+SHFMGD+HQP+HV + SD+GGNTIE+ W+  K+NLHH+WD  II TA AD Y+
Sbjct: 139 TEALLFVSHFMGDIHQPLHVSYASDKGGNTIEVHWYTRKANLHHIWDSNIIETAEADLYN 198

Query: 199 KDTELLLQDIVANFTDGVWHDDVSSWKDCDNLMKCPNKYATESINMACKWGYKGVTPGET 258
              E ++  +  N T   W D V  W+ C     CP+ YA+E I  AC W YKGVT G+T
Sbjct: 199 SALEGMVDALKKNITTE-WADQVKRWETCTKKTACPDIYASEGIQAACDWAYKGVTEGDT 257

Query: 259 LADDYFNSRMPIVMKRIAQGGIRLAMFLNRIF 290
           L D+YF SR+PIV +R+AQGG+RLA  LNRIF
Sbjct: 258 LEDEYFYSRLPIVYQRLAQGGVRLAATLNRIF 289

Probable endonuclease (By similarity). Can not hydrolyze single stranded DNA and does not cleave mismatches.

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: 0

EC: .

EC: 1

>sp|F4JJL3|ENDO5_ARATH Endonuclease 5 OS=Arabidopsis thaliana GN=ENDO5 PE=2 SV=1

 Score =  305 bits (781), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 147/286 (51%), Positives = 199/286 (69%), Gaps = 4/286 (1%)

Query: 9   FVLFVSLASVLVPGAWGWSKEGHIMTCRIAQSLLEPDAAHAVENLLPQHVNGD-LSALCV 67
           +++ V + + LV GA  W K+GH   C++A+   E D   AV+ LLP+ V+G  L+  C 
Sbjct: 4   WIVSVLVLTHLVHGALCWGKDGHYTVCKLAEGFFEDDTIAAVKKLLPESVDGGGLADFCS 63

Query: 68  WPDQVRHWYRYRWTSPLHFIDTPDDACTYEFSRDCHDTHGKKNMCIVGAIRNFTSQLLHY 127
           WPD+++   +++WTS LH+++TP+  C YE+ RDCHDTH  K+ C+ GAI N+T+QL+  
Sbjct: 64  WPDEIKKLSQWQWTSTLHYVNTPEYRCNYEYCRDCHDTHKHKDWCVTGAIFNYTNQLMSA 123

Query: 128 REGSSDRRH-NMTEALLFLSHFMGDVHQPMHVGFTSDEGGNTIELRWFRHKSNLHHVWDR 186
            E S +  H N+TEALLFLSH+MGDVHQP+H GF  D GGNTI + W+ +KSNLHHVWD 
Sbjct: 124 SENSQNIVHYNLTEALLFLSHYMGDVHQPLHTGFLGDLGGNTIIVNWYHNKSNLHHVWDN 183

Query: 187 EIILTALADYYDKDTELLLQDIVANFTDGVWHDDVSSWKDCDNLMK-CPNKYATESINMA 245
            II +AL  YY+     ++Q + A   +G W +DV SWK C    K CPN YA+ESI++A
Sbjct: 184 MIIDSALETYYNSSLPHMIQALQAKLKNG-WSNDVPSWKSCHFHQKACPNLYASESIDLA 242

Query: 246 CKWGYKGVTPGETLADDYFNSRMPIVMKRIAQGGIRLAMFLNRIFS 291
           CK+ Y+  TPG TL D+YF SR+P+V KR+AQGGIRLA  LNRIFS
Sbjct: 243 CKYAYRNATPGTTLGDEYFLSRLPVVEKRLAQGGIRLAATLNRIFS 288

Hydrolyzes only single stranded DNA and RNA without apparent specificity for bases. Endonuclease that recognizes and cleaves some mismatches with high efficiency, including heteroduplex double-stranded DNA; mostly efficient on T/G, A/G and G/G mismatches, less efficient for T/T and poorly efficient for C/C, A/A, T/C and A/C.

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: 0

EC: .

EC: 1

>sp|Q8LDW6|ENDO3_ARATH Endonuclease 3 OS=Arabidopsis thaliana GN=ENDO3 PE=2 SV=1

 Score =  295 bits (755), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 141/285 (49%), Positives = 191/285 (67%), Gaps = 8/285 (2%)

Query: 9   FVLFVSLASVLVPGAWGWSKEGHIMTCRIAQSLLEPDAAHAVENLLPQHVNGDLSALCVW 68
           +++ + + + LV GA  W   GH   C+IAQS  E D   AV+ LLP+  NG+L+A+C W
Sbjct: 8   WIVSILVLTQLVNGALCWGDAGHYAVCKIAQSYFEEDTVVAVKKLLPESANGELAAVCSW 67

Query: 69  PDQVRHWYRYRWTSPLHFIDTPDDACTYEFSRDCHDTHGKKNMCIVGAIRNFTSQLLHYR 128
           PD+++   ++RWTS LHF DTPD  C YE+SRDC      K+ C+ GAI N+T+QL+   
Sbjct: 68  PDEIKKLPQWRWTSALHFADTPDYKCNYEYSRDC-----PKDWCVTGAIFNYTNQLMSTS 122

Query: 129 EGSSDRRH-NMTEALLFLSHFMGDVHQPMHVGFTSDEGGNTIELRWFRHKSNLHHVWDRE 187
           E S    H N+TEAL+FLSH+MGD+HQP+H GF  D GGN I++ W+  ++NLH VWD  
Sbjct: 123 ENSQSIVHYNLTEALMFLSHYMGDIHQPLHEGFIGDLGGNKIKVHWYNQETNLHRVWDDM 182

Query: 188 IILTALADYYDKDTELLLQDIVANFTDGVWHDDVSSWKDCD-NLMKCPNKYATESINMAC 246
           II +AL  YY+     ++ ++ A   +G W +DV SW+ C  N   CPN YA+ESI++AC
Sbjct: 183 IIESALETYYNSSLPRMIHELQAKLKNG-WSNDVPSWESCQLNQTACPNPYASESIDLAC 241

Query: 247 KWGYKGVTPGETLADDYFNSRMPIVMKRIAQGGIRLAMFLNRIFS 291
           K+ Y+  T G TL D YF SR+P+V KR+AQGGIRLA  LNRIFS
Sbjct: 242 KYAYRNATAGTTLGDYYFVSRLPVVEKRLAQGGIRLAGTLNRIFS 286

Probable endonuclease (By similarity). Can not hydrolyze single stranded DNA and does not cleave mismatches.

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: 0

EC: .

EC: 1

>sp|P24504|NUP3_PENSQ Nuclease PA3 OS=Penicillium sp. PE=1 SV=1

 Score =  107 bits (268), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 79/278 (28%), Positives = 131/278 (47%), Gaps = 29/278 (10%)

Query: 26  WSKEGHIMTCRIAQSLLEPDAAHAVENLLPQHVNGDLSALCVWPDQVRHWYRYRWTSPLH 85
           W   GH     +AQ  + P+AA   + +L    +  L+++  W D+ R     +W++ LH
Sbjct: 1   WGALGHATVAYVAQHYVSPEAASWAQGILGSSSSSYLASIASWADEYRLTSAGKWSASLH 60

Query: 86  FIDTPDDA---CTYEFSRDCHDTHGKKNMCIVGAIRNFTSQLLHYREGSSDRRHNMTEAL 142
           FID  D+    C  ++ RDC       + C + AI N+T ++      SS    N  EAL
Sbjct: 61  FIDAEDNPPTNCNVDYERDC-----GSSGCSISAIANYTQRV----SDSSLSSENHAEAL 111

Query: 143 LFLSHFMGDVHQPMHVGFTSDE----GGNTIELRWFRHKSNLHHVWDREIILTALADYYD 198
            FL HF+GD+ QP+H     DE    GGN I + +  +  NLH  WD  +    +  +  
Sbjct: 112 RFLVHFIGDMTQPLH-----DEAYAVGGNKINVTFDGYHDNLHSDWDTYMPQKLIGGHAL 166

Query: 199 KDTELLLQDIVANFTDGVWHDDVSSWKDCDNL---MKCPNKYATESINMACKW----GYK 251
            D E   + +V N   G +    + W   DN+   +    ++A+++  + C      G  
Sbjct: 167 SDAESWAKTLVQNIESGNYTAQATGWIKGDNISEPITTATRWASDANALVCTVVMPHGAA 226

Query: 252 GVTPGETLADDYFNSRMPIVMKRIAQGGIRLAMFLNRI 289
            +  G+ L   Y++S +  +  +IA+GG RLA ++N I
Sbjct: 227 ALQTGD-LYPTYYDSVIDTIELQIAKGGYRLANWINEI 263

Hydrolyzes only single stranded DNA and RNA without apparent specificity for bases.

Penicillium sp (taxid: 5081)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 6

>sp|P24021|NUS1_ASPOR Nuclease S1 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=nucS PE=1 SV=2

 Score =  106 bits (265), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 77/293 (26%), Positives = 129/293 (44%), Gaps = 23/293 (7%)

Query: 10  VLFVSLASV-LVPGAWGWSKEGHIMTCRIAQSLLEPDAAHAVENLLPQHVNGDLSALCVW 68
           +L +S A++ L    +GW   GH     IAQS +        +N+L       L+ +  W
Sbjct: 4   LLPISAATLALAQLTYGWGNLGHETVAYIAQSFVASSTESFCQNILGDDSTSYLANVATW 63

Query: 69  PDQVRHWYRYRWTSPLHFIDT---PDDACTYEFSRDCHDTHGKKNMCIVGAIRNFTSQLL 125
            D  ++     ++ P HFID    P  +C  ++ RDC         C + AI+N+T+ LL
Sbjct: 64  ADTYKYTDAGEFSKPYHFIDAQDNPPQSCGVDYDRDCGSAG-----CSISAIQNYTNILL 118

Query: 126 HYREGSSDRRHNMTEALLFLSHFMGDVHQPMHVGFTSDEGGNTIELRWFRHKSNLHHVWD 185
               GS         AL F+ H +GD+HQP+H     + GGN I++ +    +NLHH+WD
Sbjct: 119 ESPNGS-----EALNALKFVVHIIGDIHQPLH-DENLEAGGNGIDVTYDGETTNLHHIWD 172

Query: 186 REIILTALADYYDKDTELLLQDIVANFTDGVWHDDVSSWKDCDNL---MKCPNKYATESI 242
             +   A   Y     +     +      G +     SW D  ++   +     +A ++ 
Sbjct: 173 TNMPEEAAGGYSLSVAKTYADLLTERIKTGTYSSKKDSWTDGIDIKDPVSTSMIWAADAN 232

Query: 243 NMACKW----GYKGVTPGETLADDYFNSRMPIVMKRIAQGGIRLAMFLNRIFS 291
              C      G   +   + L+ +Y++   P+  + IA+ G RLA +L+ I S
Sbjct: 233 TYVCSTVLDDGLAYINSTD-LSGEYYDKSQPVFEELIAKAGYRLAAWLDLIAS 284

Hydrolyzes only single stranded DNA and RNA without apparent specificity for bases.

Aspergillus oryzae (strain ATCC 42149 / RIB 40) (taxid: 510516)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: 0

EC: .

EC: 1

>sp|P24289|NUP1_PENCI Nuclease P1 OS=Penicillium citrinum PE=1 SV=1

 Score =  106 bits (264), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 79/278 (28%), Positives = 130/278 (46%), Gaps = 29/278 (10%)

Query: 26  WSKEGHIMTCRIAQSLLEPDAAHAVENLLPQHVNGDLSALCVWPDQVRHWYRYRWTSPLH 85
           W   GH     +AQ  + P+AA   + +L    +  L+++  W D+ R     +W++ LH
Sbjct: 1   WGALGHATVAYVAQHYVSPEAASWAQGILGSSSSSYLASIASWADEYRLTSAGKWSASLH 60

Query: 86  FIDTPDDA---CTYEFSRDCHDTHGKKNMCIVGAIRNFTSQLLHYREGSSDRRHNMTEAL 142
           FID  D+    C  ++ RDC       + C + AI N+T ++      SS    N  EAL
Sbjct: 61  FIDAEDNPPTNCNVDYERDC-----GSSGCSISAIANYTQRV----SDSSLSSENHAEAL 111

Query: 143 LFLSHFMGDVHQPMHVGFTSDE----GGNTIELRWFRHKSNLHHVWDREIILTALADYYD 198
            FL HF+GD+ QP+H     DE    GGN I + +  +  NLH  WD  +    +  +  
Sbjct: 112 RFLVHFIGDMTQPLH-----DEAYAVGGNKINVTFDGYHDNLHSDWDTYMPQKLIGGHAL 166

Query: 199 KDTELLLQDIVANFTDGVWHDDVSSWKDCDNL---MKCPNKYATESINMACKW----GYK 251
            D E   + +V N   G +      W   DN+   +    ++A+++  + C      G  
Sbjct: 167 SDAESWAKTLVQNIESGNYTAQAIGWIKGDNISEPITTATRWASDANALVCTVVMPHGAA 226

Query: 252 GVTPGETLADDYFNSRMPIVMKRIAQGGIRLAMFLNRI 289
            +  G+ L   Y++S +  +  +IA+GG RLA ++N I
Sbjct: 227 ALQTGD-LYPTYYDSVIDTIELQIAKGGYRLANWINEI 263

Hydrolyzes only single stranded DNA and RNA without apparent specificity for bases.

Penicillium citrinum (taxid: 5077)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: 0

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	301
224116200	302	predicted protein [Populus trichocarpa]	0.973	0.970	0.765	1e-138
194305013	300	putative pre-endonuclease [Humulus lupul	0.973	0.976	0.767	1e-137
225469298	307	PREDICTED: nuclease S1 [Vitis vinifera]	1.0	0.980	0.736	1e-136
351726146	308	endonuclease [Glycine max] gi|145442272|	0.956	0.935	0.743	1e-134
296080967	283	unnamed protein product [Vitis vinifera]	0.940	1.0	0.763	1e-134
255560822	286	Nuclease PA3, putative [Ricinus communis	0.950	1.0	0.756	1e-133
356549401	308	PREDICTED: nuclease PA3-like [Glycine ma	0.956	0.935	0.732	1e-133
3551956	298	senescence-associated protein 6 [Hemeroc	0.983	0.993	0.710	1e-132
349731971	302	endonuclease 1 [Solanum lycopersicum]	0.973	0.970	0.720	1e-130
350539631	302	endonuclease precursor-like precursor [S	0.973	0.970	0.720	1e-130

>gi|224116200|ref|XP_002317237.1| predicted protein [Populus trichocarpa] gi|222860302|gb|EEE97849.1| predicted protein [Populus trichocarpa]

 Score =  497 bits (1280), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 228/298 (76%), Positives = 262/298 (87%), Gaps = 5/298 (1%)

Query: 4   LCPLKFVLFVSLASVLVPGAWGWSKEGHIMTCRIAQSLLEPDAAHAVENLLPQHVNGDLS 63
           LC L F+ F  LAS+ +PGA GWSKEGHI+TCRIAQ+LL P+AAHAVENLLP ++NGDLS
Sbjct: 10  LCALAFIFFAGLASISLPGALGWSKEGHIITCRIAQNLLGPEAAHAVENLLPHNLNGDLS 69

Query: 64  ALCVWPDQVRHWYRYRWTSPLHFIDTPDDACTYEFSRDCHDTHGKKNMCIVGAIRNFTSQ 123
           ALC+WPDQ+RHWYRYRWTSPLHFIDTPD ACT+++SRDC      K+ C+ GAI+NFTSQ
Sbjct: 70  ALCIWPDQIRHWYRYRWTSPLHFIDTPDKACTFDYSRDC-----VKDACVDGAIQNFTSQ 124

Query: 124 LLHYREGSSDRRHNMTEALLFLSHFMGDVHQPMHVGFTSDEGGNTIELRWFRHKSNLHHV 183
           LLHYR+G++DRR+N+TEALLFLSHFMGD+HQPMHVGFTSDEGGNT+ELRWFRHKSNLHHV
Sbjct: 125 LLHYRDGTADRRYNLTEALLFLSHFMGDIHQPMHVGFTSDEGGNTVELRWFRHKSNLHHV 184

Query: 184 WDREIILTALADYYDKDTELLLQDIVANFTDGVWHDDVSSWKDCDNLMKCPNKYATESIN 243
           WDREIILTAL D+YD D  LL + I  NFTDG+W DDV+SWKDCD+L+ CP+KYATESIN
Sbjct: 185 WDREIILTALKDFYDNDMVLLQEAIEGNFTDGIWFDDVASWKDCDDLLSCPDKYATESIN 244

Query: 244 MACKWGYKGVTPGETLADDYFNSRMPIVMKRIAQGGIRLAMFLNRIFSDSDEEFAAAT 301
           MACKWGYKGV    TLADDYF+SRMPIVMKRIAQGG+RLAMFLNRIF D +E FA+ T
Sbjct: 245 MACKWGYKGVKESVTLADDYFDSRMPIVMKRIAQGGVRLAMFLNRIFGDPEEGFASPT 302

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|194305013|emb|CAP39915.1| putative pre-endonuclease [Humulus lupulus]

 Score =  494 bits (1272), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 225/293 (76%), Positives = 258/293 (88%)

Query: 9   FVLFVSLASVLVPGAWGWSKEGHIMTCRIAQSLLEPDAAHAVENLLPQHVNGDLSALCVW 68
            VL ++LAS+ VP A GWSKEGH MTC+IAQ+LL+ +AA AV NLLP +VNGDLSALCVW
Sbjct: 8   LVLVLALASITVPSAHGWSKEGHTMTCQIAQALLDSEAAEAVRNLLPDYVNGDLSALCVW 67

Query: 69  PDQVRHWYRYRWTSPLHFIDTPDDACTYEFSRDCHDTHGKKNMCIVGAIRNFTSQLLHYR 128
           PDQVRHWYRYRWTSPLHFIDTPD AC++++SRDCHD HG +NMC+ GAI+NFTSQL HYR
Sbjct: 68  PDQVRHWYRYRWTSPLHFIDTPDQACSFDYSRDCHDQHGLENMCVAGAIQNFTSQLSHYR 127

Query: 129 EGSSDRRHNMTEALLFLSHFMGDVHQPMHVGFTSDEGGNTIELRWFRHKSNLHHVWDREI 188
           EG+SDRR+NMTEALLFLSHFMGD+HQP+HVGFT+DEGGNTI LRWFRHKSNLHHVWDREI
Sbjct: 128 EGTSDRRYNMTEALLFLSHFMGDIHQPLHVGFTTDEGGNTINLRWFRHKSNLHHVWDREI 187

Query: 189 ILTALADYYDKDTELLLQDIVANFTDGVWHDDVSSWKDCDNLMKCPNKYATESINMACKW 248
           ILTAL DYY+K+T+LLLQDI  N+TDGVW DDVSSW+ CD+L  C NK+A ESIN+ACKW
Sbjct: 188 ILTALKDYYEKNTDLLLQDIKGNYTDGVWSDDVSSWEHCDDLASCINKFAVESINIACKW 247

Query: 249 GYKGVTPGETLADDYFNSRMPIVMKRIAQGGIRLAMFLNRIFSDSDEEFAAAT 301
           GYK V PG TLADDYF+SRMPI+MKRIAQGG+RLAM LNR+  +SDE  A  T
Sbjct: 248 GYKDVEPGVTLADDYFDSRMPILMKRIAQGGVRLAMILNRVLGESDEGLATPT 300

Source: Humulus lupulus

Species: Humulus lupulus

Genus: Humulus

Family: Cannabaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225469298|ref|XP_002269205.1| PREDICTED: nuclease S1 [Vitis vinifera]

 Score =  490 bits (1261), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 224/304 (73%), Positives = 260/304 (85%), Gaps = 3/304 (0%)

Query: 1   MGGLCPLK---FVLFVSLASVLVPGAWGWSKEGHIMTCRIAQSLLEPDAAHAVENLLPQH 57
            GGL  L    F L V    V+ PGA  WSKEGHIMTC+IAQ+LLEP+AA AV NLLP +
Sbjct: 4   FGGLFRLSRSGFGLLVVFTFVMAPGALAWSKEGHIMTCQIAQALLEPEAAEAVRNLLPDY 63

Query: 58  VNGDLSALCVWPDQVRHWYRYRWTSPLHFIDTPDDACTYEFSRDCHDTHGKKNMCIVGAI 117
           VNGDLSALC WPDQ+RHWY+YRWTS LHFIDTPD+ACT+++SRDCHD HG ++MC+ GAI
Sbjct: 64  VNGDLSALCTWPDQIRHWYKYRWTSSLHFIDTPDEACTFDYSRDCHDPHGLQDMCVAGAI 123

Query: 118 RNFTSQLLHYREGSSDRRHNMTEALLFLSHFMGDVHQPMHVGFTSDEGGNTIELRWFRHK 177
           +NFTSQL HY EGSSDRR+N+TEALLFLSHFMGD+HQP+HVGFTSDEGGNTIEL WFRHK
Sbjct: 124 KNFTSQLSHYGEGSSDRRYNLTEALLFLSHFMGDIHQPLHVGFTSDEGGNTIELHWFRHK 183

Query: 178 SNLHHVWDREIILTALADYYDKDTELLLQDIVANFTDGVWHDDVSSWKDCDNLMKCPNKY 237
           SNLHHVWDREIILTA AD+Y KD +LLL+DI  NFTDGVW DDVSSWK+C++L+ CPNKY
Sbjct: 184 SNLHHVWDREIILTAAADFYTKDMDLLLEDIKGNFTDGVWADDVSSWKECNDLLTCPNKY 243

Query: 238 ATESINMACKWGYKGVTPGETLADDYFNSRMPIVMKRIAQGGIRLAMFLNRIFSDSDEEF 297
           A+ESI++ACKWGYKG  PG TLAD+YFNSRMPI MKRIAQGG+RL+M LNR+F  +  + 
Sbjct: 244 ASESISIACKWGYKGAKPGSTLADEYFNSRMPIAMKRIAQGGVRLSMILNRVFGHTHGKM 303

Query: 298 AAAT 301
           +AAT
Sbjct: 304 SAAT 307

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351726146|ref|NP_001235325.1| endonuclease [Glycine max] gi|145442272|gb|ABP68856.1| endonuclease [Glycine max]

 Score =  483 bits (1243), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 214/288 (74%), Positives = 255/288 (88%)

Query: 14  SLASVLVPGAWGWSKEGHIMTCRIAQSLLEPDAAHAVENLLPQHVNGDLSALCVWPDQVR 73
           S A + VPGA  WSKEGH+MTC+IAQ+LLEP+A+ AV  LLP HV G+LSALC WPDQ+R
Sbjct: 21  SSAFIGVPGALAWSKEGHVMTCQIAQALLEPEASEAVYQLLPDHVKGNLSALCTWPDQIR 80

Query: 74  HWYRYRWTSPLHFIDTPDDACTYEFSRDCHDTHGKKNMCIVGAIRNFTSQLLHYREGSSD 133
           HWY+YRWTSPLHFIDTPD+AC++++SRDCHD  G ++MC+ GA++NFTSQL+HY+EG+SD
Sbjct: 81  HWYKYRWTSPLHFIDTPDNACSFQYSRDCHDPQGVEDMCVAGAVKNFTSQLMHYKEGTSD 140

Query: 134 RRHNMTEALLFLSHFMGDVHQPMHVGFTSDEGGNTIELRWFRHKSNLHHVWDREIILTAL 193
           RR+NMTEALLFLSHFMGD+HQPMHVGFT+DEGGNTIELRWFRHKSNLHHVWDREIILT L
Sbjct: 141 RRYNMTEALLFLSHFMGDIHQPMHVGFTTDEGGNTIELRWFRHKSNLHHVWDREIILTGL 200

Query: 194 ADYYDKDTELLLQDIVANFTDGVWHDDVSSWKDCDNLMKCPNKYATESINMACKWGYKGV 253
           ADYYDKD   LLQDI  N+TDG+W DDV+SWK C+++ +C N +A ESI +ACKWGY+GV
Sbjct: 201 ADYYDKDVSFLLQDIERNYTDGIWSDDVTSWKHCNDISQCVNNWAKESIQIACKWGYEGV 260

Query: 254 TPGETLADDYFNSRMPIVMKRIAQGGIRLAMFLNRIFSDSDEEFAAAT 301
            PG TLADDYF+SRMP+VMKRIAQGGIRLAM LN++F+DS+E FA AT
Sbjct: 261 QPGTTLADDYFDSRMPLVMKRIAQGGIRLAMILNKVFADSEEGFATAT 308

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296080967|emb|CBI18599.3| unnamed protein product [Vitis vinifera]

 Score =  483 bits (1243), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 216/283 (76%), Positives = 252/283 (89%)

Query: 19  LVPGAWGWSKEGHIMTCRIAQSLLEPDAAHAVENLLPQHVNGDLSALCVWPDQVRHWYRY 78
           + PGA  WSKEGHIMTC+IAQ+LLEP+AA AV NLLP +VNGDLSALC WPDQ+RHWY+Y
Sbjct: 1   MAPGALAWSKEGHIMTCQIAQALLEPEAAEAVRNLLPDYVNGDLSALCTWPDQIRHWYKY 60

Query: 79  RWTSPLHFIDTPDDACTYEFSRDCHDTHGKKNMCIVGAIRNFTSQLLHYREGSSDRRHNM 138
           RWTS LHFIDTPD+ACT+++SRDCHD HG ++MC+ GAI+NFTSQL HY EGSSDRR+N+
Sbjct: 61  RWTSSLHFIDTPDEACTFDYSRDCHDPHGLQDMCVAGAIKNFTSQLSHYGEGSSDRRYNL 120

Query: 139 TEALLFLSHFMGDVHQPMHVGFTSDEGGNTIELRWFRHKSNLHHVWDREIILTALADYYD 198
           TEALLFLSHFMGD+HQP+HVGFTSDEGGNTIEL WFRHKSNLHHVWDREIILTA AD+Y 
Sbjct: 121 TEALLFLSHFMGDIHQPLHVGFTSDEGGNTIELHWFRHKSNLHHVWDREIILTAAADFYT 180

Query: 199 KDTELLLQDIVANFTDGVWHDDVSSWKDCDNLMKCPNKYATESINMACKWGYKGVTPGET 258
           KD +LLL+DI  NFTDGVW DDVSSWK+C++L+ CPNKYA+ESI++ACKWGYKG  PG T
Sbjct: 181 KDMDLLLEDIKGNFTDGVWADDVSSWKECNDLLTCPNKYASESISIACKWGYKGAKPGST 240

Query: 259 LADDYFNSRMPIVMKRIAQGGIRLAMFLNRIFSDSDEEFAAAT 301
           LAD+YFNSRMPI MKRIAQGG+RL+M LNR+F  +  + +AAT
Sbjct: 241 LADEYFNSRMPIAMKRIAQGGVRLSMILNRVFGHTHGKMSAAT 283

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255560822|ref|XP_002521424.1| Nuclease PA3, putative [Ricinus communis] gi|223539323|gb|EEF40914.1| Nuclease PA3, putative [Ricinus communis]

 Score =  481 bits (1239), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 220/291 (75%), Positives = 257/291 (88%), Gaps = 5/291 (1%)

Query: 11  LFVSLASVLVPGAWGWSKEGHIMTCRIAQSLLEPDAAHAVENLLPQHVNGDLSALCVWPD 70
           + VS AS+ VPGA GWSKEGHIMTCRIAQ+LL P+AAHAVE+LLP +VNGDLSALCVW D
Sbjct: 1   MLVSFASIFVPGALGWSKEGHIMTCRIAQNLLGPEAAHAVEHLLPHNVNGDLSALCVWAD 60

Query: 71  QVRHWYRYRWTSPLHFIDTPDDACTYEFSRDCHDTHGKKNMCIVGAIRNFTSQLLHYREG 130
           Q+RHWY+YRWTS LHFIDTPD ACT+++SRDC     +++ C+ GAI+NFTSQLLHY+EG
Sbjct: 61  QIRHWYKYRWTSSLHFIDTPDKACTFDYSRDC-----EEDRCVAGAIQNFTSQLLHYKEG 115

Query: 131 SSDRRHNMTEALLFLSHFMGDVHQPMHVGFTSDEGGNTIELRWFRHKSNLHHVWDREIIL 190
           S+DRR+N+TEALLFLSHF+GD+HQP+HVGFTSDEGGNTI+LRW+RHKSNLHHVWDREIIL
Sbjct: 116 STDRRYNLTEALLFLSHFVGDIHQPLHVGFTSDEGGNTIDLRWYRHKSNLHHVWDREIIL 175

Query: 191 TALADYYDKDTELLLQDIVANFTDGVWHDDVSSWKDCDNLMKCPNKYATESINMACKWGY 250
           TAL DYY+ D  LL Q I  NFTDG+W+DDVSSWKDC +++ CPNKYA ESI++ACKWGY
Sbjct: 176 TALKDYYENDMNLLQQAIEGNFTDGIWYDDVSSWKDCSDILSCPNKYAAESISIACKWGY 235

Query: 251 KGVTPGETLADDYFNSRMPIVMKRIAQGGIRLAMFLNRIFSDSDEEFAAAT 301
           KGV  G TL+DDYFNSRMPIVMKRIAQGGIRLAMFLN+IF DS+E  A+ T
Sbjct: 236 KGVKGGATLSDDYFNSRMPIVMKRIAQGGIRLAMFLNQIFGDSEEGIASPT 286

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356549401|ref|XP_003543082.1| PREDICTED: nuclease PA3-like [Glycine max]

 Score =  481 bits (1238), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 211/288 (73%), Positives = 257/288 (89%)

Query: 14  SLASVLVPGAWGWSKEGHIMTCRIAQSLLEPDAAHAVENLLPQHVNGDLSALCVWPDQVR 73
           S A + VPGA  WSKEGH+MTC+IAQ+LLEP+A+ AV  LLP +V G+LS+LC+WPDQ+R
Sbjct: 21  SSAFIRVPGALAWSKEGHVMTCQIAQALLEPEASEAVYQLLPDYVKGNLSSLCIWPDQIR 80

Query: 74  HWYRYRWTSPLHFIDTPDDACTYEFSRDCHDTHGKKNMCIVGAIRNFTSQLLHYREGSSD 133
           HWY+YRWTSPLHFIDTPD+AC++++SRDCHD+HG ++MC+ GA++NFTSQL+HY+EG+SD
Sbjct: 81  HWYKYRWTSPLHFIDTPDNACSFQYSRDCHDSHGVEDMCVAGAVKNFTSQLMHYKEGTSD 140

Query: 134 RRHNMTEALLFLSHFMGDVHQPMHVGFTSDEGGNTIELRWFRHKSNLHHVWDREIILTAL 193
           RR+NMTEALLFLSHFMGD+HQPMHVGFT+DEGGNTIEL WFRHKSNLHHVWDREIILTAL
Sbjct: 141 RRYNMTEALLFLSHFMGDIHQPMHVGFTTDEGGNTIELHWFRHKSNLHHVWDREIILTAL 200

Query: 194 ADYYDKDTELLLQDIVANFTDGVWHDDVSSWKDCDNLMKCPNKYATESINMACKWGYKGV 253
           ADYYDKD  LLLQDI  N+TDG+W DD++SWK C+++ +C N +A ESI +ACKWGY+GV
Sbjct: 201 ADYYDKDVSLLLQDIERNYTDGIWSDDITSWKHCNDISQCVNNWAKESIQIACKWGYEGV 260

Query: 254 TPGETLADDYFNSRMPIVMKRIAQGGIRLAMFLNRIFSDSDEEFAAAT 301
             G TLADDYF+SR+P VMKRIAQGGIRLAM LN++F+DS+E FA AT
Sbjct: 261 EAGATLADDYFDSRVPFVMKRIAQGGIRLAMILNKVFADSEERFATAT 308

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|3551956|gb|AAC34856.1| senescence-associated protein 6 [Hemerocallis hybrid cultivar]

 Score =  475 bits (1223), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 214/301 (71%), Positives = 255/301 (84%), Gaps = 5/301 (1%)

Query: 1   MGGLCPLKFVLFVSLASVLVPGAWGWSKEGHIMTCRIAQSLLEPDAAHAVENLLPQHVNG 60
           MG  C +  ++ VSL     PGAW WSKEGHI+TCRIAQ LLEP+AA  V NLLP +V+G
Sbjct: 3   MGYSCVVLGLILVSL-----PGAWPWSKEGHIVTCRIAQDLLEPEAAETVRNLLPHYVDG 57

Query: 61  DLSALCVWPDQVRHWYRYRWTSPLHFIDTPDDACTYEFSRDCHDTHGKKNMCIVGAIRNF 120
           DLSALC WPDQ+RHWY+YRW+SPLHFIDTPDDAC++++SRDCHD  G ++MC+ GA+ N+
Sbjct: 58  DLSALCTWPDQIRHWYKYRWSSPLHFIDTPDDACSFDYSRDCHDPKGAEDMCVAGAVHNY 117

Query: 121 TSQLLHYREGSSDRRHNMTEALLFLSHFMGDVHQPMHVGFTSDEGGNTIELRWFRHKSNL 180
           T+QL+HYR+G+SDRR+N+TE+LLFLSHFMGD+HQPMHVGFTSDEGGNTI LRWFRHKSNL
Sbjct: 118 TTQLMHYRDGTSDRRYNLTESLLFLSHFMGDIHQPMHVGFTSDEGGNTINLRWFRHKSNL 177

Query: 181 HHVWDREIILTALADYYDKDTELLLQDIVANFTDGVWHDDVSSWKDCDNLMKCPNKYATE 240
           HHVWDREIILTALADYY KD +   QD+  NFT G+W DD SSW +CD+L  CP K+A+E
Sbjct: 178 HHVWDREIILTALADYYGKDLDAFQQDLQNNFTTGIWSDDTSSWGECDDLFSCPKKWASE 237

Query: 241 SINMACKWGYKGVTPGETLADDYFNSRMPIVMKRIAQGGIRLAMFLNRIFSDSDEEFAAA 300
           SI++ACKWGYKGVTPGETL+D+YFNSRMPIVMKRIAQGG+RLAM LNR+FSD  +     
Sbjct: 238 SISLACKWGYKGVTPGETLSDEYFNSRMPIVMKRIAQGGVRLAMVLNRVFSDHKQHIPPP 297

Query: 301 T 301
           T
Sbjct: 298 T 298

Source: Hemerocallis hybrid cultivar

Species: Hemerocallis hybrid cultivar

Genus: Hemerocallis

Family: Xanthorrhoeaceae

Order: Asparagales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|349731971|dbj|BAL03523.1| endonuclease 1 [Solanum lycopersicum]

 Score =  472 bits (1214), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 211/293 (72%), Positives = 248/293 (84%)

Query: 4   LCPLKFVLFVSLASVLVPGAWGWSKEGHIMTCRIAQSLLEPDAAHAVENLLPQHVNGDLS 63
           L  L  + F+ +A +   G   WSKEGH+MTCRIAQ LL  +AAHAV+ LLP++VNGDLS
Sbjct: 4   LTSLSSIFFLCVAFINQHGVEAWSKEGHVMTCRIAQGLLNDEAAHAVKMLLPEYVNGDLS 63

Query: 64  ALCVWPDQVRHWYRYRWTSPLHFIDTPDDACTYEFSRDCHDTHGKKNMCIVGAIRNFTSQ 123
           ALCVWPDQVRHWY+Y+WTSPLHFIDTPD AC +++ RDCHD HG K+MC+ GAI+NFT+Q
Sbjct: 64  ALCVWPDQVRHWYKYKWTSPLHFIDTPDKACNFDYERDCHDQHGVKDMCVAGAIQNFTTQ 123

Query: 124 LLHYREGSSDRRHNMTEALLFLSHFMGDVHQPMHVGFTSDEGGNTIELRWFRHKSNLHHV 183
           L HYREG+SDRR+NMTEALLFLSHFMGD+HQPMHVGFTSD GGN+I+LRWFRHKSNLHHV
Sbjct: 124 LSHYREGTSDRRYNMTEALLFLSHFMGDIHQPMHVGFTSDAGGNSIDLRWFRHKSNLHHV 183

Query: 184 WDREIILTALADYYDKDTELLLQDIVANFTDGVWHDDVSSWKDCDNLMKCPNKYATESIN 243
           WDREIILTA  DYY KD  LL +DI  NFTDG+W DD++SW++C N+  C NK+ATESIN
Sbjct: 184 WDREIILTAAKDYYAKDINLLEEDIEGNFTDGIWSDDLASWRECGNVFSCVNKFATESIN 243

Query: 244 MACKWGYKGVTPGETLADDYFNSRMPIVMKRIAQGGIRLAMFLNRIFSDSDEE 296
           +ACKWGYKGV  GETL+DDYFNSR+PIVMKR+AQGGIRLAM LN +F  S +E
Sbjct: 244 IACKWGYKGVEAGETLSDDYFNSRLPIVMKRVAQGGIRLAMLLNNVFGASQQE 296

Source: Solanum lycopersicum

Species: Solanum lycopersicum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|350539631|ref|NP_001234227.1| endonuclease precursor-like precursor [Solanum lycopersicum] gi|114144725|emb|CAJ87709.1| putative endonuclease precursor [Solanum lycopersicum]

 Score =  470 bits (1210), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 211/293 (72%), Positives = 248/293 (84%)

Query: 4   LCPLKFVLFVSLASVLVPGAWGWSKEGHIMTCRIAQSLLEPDAAHAVENLLPQHVNGDLS 63
           L  L  + F+ +A +   G   WSKEGH+MTCRIAQ LL  +AAHAV+ LLP++VNGDLS
Sbjct: 4   LTLLSSIFFLCVAFINQHGVEAWSKEGHVMTCRIAQGLLNDEAAHAVKMLLPEYVNGDLS 63

Query: 64  ALCVWPDQVRHWYRYRWTSPLHFIDTPDDACTYEFSRDCHDTHGKKNMCIVGAIRNFTSQ 123
           ALCVWPDQVRHWY+Y+WTSPLHFIDTPD AC +++ RDCHD HG K+MC+ GAI+NFT+Q
Sbjct: 64  ALCVWPDQVRHWYKYKWTSPLHFIDTPDKACNFDYERDCHDQHGVKDMCVAGAIQNFTTQ 123

Query: 124 LLHYREGSSDRRHNMTEALLFLSHFMGDVHQPMHVGFTSDEGGNTIELRWFRHKSNLHHV 183
           L HYREG+SDRR+NMTEALLFLSHFMGD+HQPMHVGFTSD GGN+I+LRWFRHKSNLHHV
Sbjct: 124 LSHYREGTSDRRYNMTEALLFLSHFMGDIHQPMHVGFTSDAGGNSIDLRWFRHKSNLHHV 183

Query: 184 WDREIILTALADYYDKDTELLLQDIVANFTDGVWHDDVSSWKDCDNLMKCPNKYATESIN 243
           WDREIILTA  DYY KD  LL +DI  NFTDG+W DD++SW++C N+  C NK+ATESIN
Sbjct: 184 WDREIILTAAKDYYAKDINLLEEDIEGNFTDGIWSDDLASWRECGNVFSCVNKFATESIN 243

Query: 244 MACKWGYKGVTPGETLADDYFNSRMPIVMKRIAQGGIRLAMFLNRIFSDSDEE 296
           +ACKWGYKGV  GETL+DDYFNSR+PIVMKR+AQGGIRLAM LN +F  S +E
Sbjct: 244 IACKWGYKGVEAGETLSDDYFNSRLPIVMKRVAQGGIRLAMLLNNVFGASQQE 296

Source: Solanum lycopersicum

Species: Solanum lycopersicum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	301
TAIR|locus:2202114	305	BFN1 "bifunctional nuclease i"	0.913	0.901	0.741	9.5e-121
TAIR|locus:504955531	299	ENDO4 "endonuclease 4" [Arabid	0.893	0.899	0.566	5.3e-88
TAIR|locus:2199297	290	ENDO2 "AT1G68290" [Arabidopsis	0.883	0.917	0.542	3.6e-82
TAIR|locus:2119612	296	ENDO5 "endonuclease 5" [Arabid	0.893	0.908	0.527	3.3e-79
TAIR|locus:2119687	294	ENDO3 "endonuclease 3" [Arabid	0.877	0.897	0.511	2.5e-74
UNIPROTKB|G5EHU9	306	MGCH7_ch7g611 "Nuclease PA3" [	0.857	0.843	0.270	9.7e-25
GENEDB_PFALCIPARUM|PF14_0117	327	PF14_0117 "hypothetical protei	0.438	0.403	0.208	3e-05
UNIPROTKB|Q8ILX6	327	PF14_0117 "Putative uncharacte	0.438	0.403	0.208	3e-05

TAIR|locus:2202114 BFN1 "bifunctional nuclease i" [Arabidopsis thaliana (taxid:3702)]

 Score = 1188 (423.3 bits), Expect = 9.5e-121, P = 9.5e-121
 Identities = 206/278 (74%), Positives = 245/278 (88%)

Query:    26 WSKEGHIMTCRIAQSLLEPDAAHAVENLLPQHVNGDLSALCVWPDQVRHWYRYRWTSPLH 85
             WSKEGHI+TCRIAQ+LLE   AH VENLLP +V GDLSALCVWPDQ+RHWY+YRWTS LH
Sbjct:    29 WSKEGHILTCRIAQNLLEAGPAHVVENLLPDYVKGDLSALCVWPDQIRHWYKYRWTSHLH 88

Query:    86 FIDTPDDACTYEFSRDCHDTHGKKNMCIVGAIRNFTSQLLHYREGSSDRRHNMTEALLFL 145
             +IDTPD AC+YE+SRDCHD HG K+MC+ GAI+NFTSQL HY EG+SDRR+NMTEALLFL
Sbjct:    89 YIDTPDQACSYEYSRDCHDQHGLKDMCVDGAIQNFTSQLQHYGEGTSDRRYNMTEALLFL 148

Query:   146 SHFMGDVHQPMHVGFTSDEGGNTIELRWFRHKSNLHHVWDREIILTALADYYDKDTELLL 205
             SHFMGD+HQPMHVGFTSDEGGNTI+LRW++HKSNLHHVWDREIILTAL + YDK+ +LL 
Sbjct:   149 SHFMGDIHQPMHVGFTSDEGGNTIDLRWYKHKSNLHHVWDREIILTALKENYDKNLDLLQ 208

Query:   206 QDIVANFTDGVWHDDVSSWKDCDNLMKCPNKYATESINMACKWGYKGVTPGETLADDYFN 265
             +D+  N T+G+WHDD+SSW +C++L+ CP+KYA+ESI +ACKWGYKGV  GETL+++YFN
Sbjct:   209 EDLEKNITNGLWHDDLSSWTECNDLIACPHKYASESIKLACKWGYKGVKSGETLSEEYFN 268

Query:   266 SRMPIVMKRIAQGGIRLAMFLNRIFSDSDEEFA--AAT 301
             +R+PIVMKRI QGG+RLAM LNR+FSD D   A  AAT
Sbjct:   269 TRLPIVMKRIVQGGVRLAMILNRVFSD-DHAIAGVAAT 305

GO:0003676 "nucleic acid binding" evidence=IEA;ISS

GO:0004519 "endonuclease activity" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006308 "DNA catabolic process" evidence=ISS

GO:0016788 "hydrolase activity, acting on ester bonds" evidence=IEA

GO:0000014 "single-stranded DNA specific endodeoxyribonuclease activity" evidence=IDA

GO:0010150 "leaf senescence" evidence=IEP

GO:0016891 "endoribonuclease activity, producing 5'-phosphomonoesters" evidence=IDA

GO:0043765 "T/G mismatch-specific endonuclease activity" evidence=IDA

GO:0080187 "floral organ senescence" evidence=IEP

TAIR|locus:504955531 ENDO4 "endonuclease 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 879 (314.5 bits), Expect = 5.3e-88, P = 5.3e-88
 Identities = 154/272 (56%), Positives = 200/272 (73%)

Query:    22 GAWGWSKEGHIMTCRIAQSLLEPDAAHAVENLLPQHVNGDLSALCVWPDQVRHWYRYRWT 81
             GA  W KEGH   C+IA+S  E +   AV+ LLP+  +GDL+++C WPD+++H +++RWT
Sbjct:    21 GALCWGKEGHYTVCKIAESYFEEETVAAVKKLLPKSADGDLASVCSWPDEIKHHWQWRWT 80

Query:    82 SPLHFIDTPDDACTYEFSRDCHDTHGKKNMCIVGAIRNFTSQLLHYREGSSDRRH-NMTE 140
             SPLH++DTPD  C YE+ RDCHDTH  ++ C+ GAI N+T QL+   E S    H N+TE
Sbjct:    81 SPLHYVDTPDYRCNYEYCRDCHDTHKNQDRCVTGAIFNYTMQLMSASENSDTIVHYNLTE 140

Query:   141 ALLFLSHFMGDVHQPMHVGFTSDEGGNTIELRWFRHKSNLHHVWDREIILTALADYYDKD 200
             AL+FLSHF+GD+HQP+HVGF  DEGGNTI +RW+R K+NLHHVWD  II +AL  YY+K 
Sbjct:   141 ALMFLSHFIGDIHQPLHVGFLGDEGGNTITVRWYRRKTNLHHVWDNMIIESALKTYYNKS 200

Query:   201 TELLLQDIVANFTDGVWHDDVSSWKDCD-NLMKCPNKYATESINMACKWGYKGVTPGETL 259
               L+++ + AN T+  W +DV  W+ C  N   CPN YA+ESIN+ACK+ Y+  TPG TL
Sbjct:   201 LPLMIEALQANLTND-WSNDVPLWESCQLNQTACPNPYASESINLACKYAYRNATPGTTL 259

Query:   260 ADDYFNSRMPIVMKRIAQGGIRLAMFLNRIFS 291
              DDYF SR+PIV KR+AQGGIRLA  LNRIFS
Sbjct:   260 GDDYFLSRLPIVEKRLAQGGIRLAATLNRIFS 291

GO:0003676 "nucleic acid binding" evidence=IEA;ISS

GO:0004519 "endonuclease activity" evidence=IEA;ISS

GO:0005576 "extracellular region" evidence=ISM

GO:0006308 "DNA catabolic process" evidence=IEA;ISS

GO:0016788 "hydrolase activity, acting on ester bonds" evidence=IEA

GO:0000014 "single-stranded DNA specific endodeoxyribonuclease activity" evidence=IDA

GO:0043765 "T/G mismatch-specific endonuclease activity" evidence=IDA

TAIR|locus:2199297 ENDO2 "AT1G68290" [Arabidopsis thaliana (taxid:3702)]

 Score = 824 (295.1 bits), Expect = 3.6e-82, P = 3.6e-82
 Identities = 147/271 (54%), Positives = 195/271 (71%)

Query:    21 PGAWGWSKEGHIMTCRIAQSLLEPDAAHAVENLLPQHVNGDLSALCVWPDQVRHWYRYRW 80
             P   GW KEGH + C+IAQ+ L+  AA AV+ LLP+   GDLS+LC+W D+V+  +RY W
Sbjct:    23 PNIHGWGKEGHEIICKIAQTRLDETAAKAVKELLPESAEGDLSSLCLWADRVK--FRYHW 80

Query:    81 TSPLHFIDTPDDACTYEFSRDCHDTHGKKNMCIVGAIRNFTSQLLHYREG-SSDRRHNMT 139
             +SPLH+I+TPD AC+Y+++RDC D  G+K  C+ GAI N+T+QLL Y+   SS  ++N+T
Sbjct:    81 SSPLHYINTPD-ACSYQYNRDCKDESGEKGRCVAGAIYNYTTQLLSYKTAASSQSQYNLT 139

Query:   140 EALLFLSHFMGDVHQPMHVGFTSDEGGNTIELRWFRHKSNLHHVWDREIILTALADYYDK 199
             EALLF+SHFMGD+HQP+HV + SD+GGNTIE+ W+  K+NLHH+WD  II TA AD Y+ 
Sbjct:   140 EALLFVSHFMGDIHQPLHVSYASDKGGNTIEVHWYTRKANLHHIWDSNIIETAEADLYNS 199

Query:   200 DTELLLQDIVANFTDGVWHDDVSSWKDCDNLMKCPNKYATESINMACKWGYKGVTPGETL 259
               E ++  +  N T   W D V  W+ C     CP+ YA+E I  AC W YKGVT G+TL
Sbjct:   200 ALEGMVDALKKNITTE-WADQVKRWETCTKKTACPDIYASEGIQAACDWAYKGVTEGDTL 258

Query:   260 ADDYFNSRMPIVMKRIAQGGIRLAMFLNRIF 290
              D+YF SR+PIV +R+AQGG+RLA  LNRIF
Sbjct:   259 EDEYFYSRLPIVYQRLAQGGVRLAATLNRIF 289

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0004519 "endonuclease activity" evidence=ISS;IDA

GO:0005576 "extracellular region" evidence=ISM

GO:0006308 "DNA catabolic process" evidence=ISS

GO:0000014 "single-stranded DNA specific endodeoxyribonuclease activity" evidence=IDA

GO:0043765 "T/G mismatch-specific endonuclease activity" evidence=IDA

TAIR|locus:2119612 ENDO5 "endonuclease 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 796 (285.3 bits), Expect = 3.3e-79, P = 3.3e-79
 Identities = 144/273 (52%), Positives = 191/273 (69%)

Query:    22 GAWGWSKEGHIMTCRIAQSLLEPDAAHAVENLLPQHVNGD-LSALCVWPDQVRHWYRYRW 80
             GA  W K+GH   C++A+   E D   AV+ LLP+ V+G  L+  C WPD+++   +++W
Sbjct:    17 GALCWGKDGHYTVCKLAEGFFEDDTIAAVKKLLPESVDGGGLADFCSWPDEIKKLSQWQW 76

Query:    81 TSPLHFIDTPDDACTYEFSRDCHDTHGKKNMCIVGAIRNFTSQLLHYREGSSDRRH-NMT 139
             TS LH+++TP+  C YE+ RDCHDTH  K+ C+ GAI N+T+QL+   E S +  H N+T
Sbjct:    77 TSTLHYVNTPEYRCNYEYCRDCHDTHKHKDWCVTGAIFNYTNQLMSASENSQNIVHYNLT 136

Query:   140 EALLFLSHFMGDVHQPMHVGFTSDEGGNTIELRWFRHKSNLHHVWDREIILTALADYYDK 199
             EALLFLSH+MGDVHQP+H GF  D GGNTI + W+ +KSNLHHVWD  II +AL  YY+ 
Sbjct:   137 EALLFLSHYMGDVHQPLHTGFLGDLGGNTIIVNWYHNKSNLHHVWDNMIIDSALETYYNS 196

Query:   200 DTELLLQDIVANFTDGVWHDDVSSWKDCDNLMK-CPNKYATESINMACKWGYKGVTPGET 258
                 ++Q + A   +G W +DV SWK C    K CPN YA+ESI++ACK+ Y+  TPG T
Sbjct:   197 SLPHMIQALQAKLKNG-WSNDVPSWKSCHFHQKACPNLYASESIDLACKYAYRNATPGTT 255

Query:   259 LADDYFNSRMPIVMKRIAQGGIRLAMFLNRIFS 291
             L D+YF SR+P+V KR+AQGGIRLA  LNRIFS
Sbjct:   256 LGDEYFLSRLPVVEKRLAQGGIRLAATLNRIFS 288

GO:0003676 "nucleic acid binding" evidence=IEA;ISS

GO:0004519 "endonuclease activity" evidence=IEA;ISS

GO:0005576 "extracellular region" evidence=ISM

GO:0006308 "DNA catabolic process" evidence=IEA;ISS

GO:0016788 "hydrolase activity, acting on ester bonds" evidence=IEA

GO:0000014 "single-stranded DNA specific endodeoxyribonuclease activity" evidence=IDA

GO:0043765 "T/G mismatch-specific endonuclease activity" evidence=IDA

GO:0000041 "transition metal ion transport" evidence=RCA

GO:0006826 "iron ion transport" evidence=RCA

GO:0010106 "cellular response to iron ion starvation" evidence=RCA

GO:0010167 "response to nitrate" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

GO:0016132 "brassinosteroid biosynthetic process" evidence=RCA

TAIR|locus:2119687 ENDO3 "endonuclease 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 750 (269.1 bits), Expect = 2.5e-74, P = 2.5e-74
 Identities = 139/272 (51%), Positives = 183/272 (67%)

Query:    22 GAWGWSKEGHIMTCRIAQSLLEPDAAHAVENLLPQHVNGDLSALCVWPDQVRHWYRYRWT 81
             GA  W   GH   C+IAQS  E D   AV+ LLP+  NG+L+A+C WPD+++   ++RWT
Sbjct:    21 GALCWGDAGHYAVCKIAQSYFEEDTVVAVKKLLPESANGELAAVCSWPDEIKKLPQWRWT 80

Query:    82 SPLHFIDTPDDACTYEFSRDCHDTHGKKNMCIVGAIRNFTSQLLHYREGSSDRRH-NMTE 140
             S LHF DTPD  C YE+SRDC      K+ C+ GAI N+T+QL+   E S    H N+TE
Sbjct:    81 SALHFADTPDYKCNYEYSRDC-----PKDWCVTGAIFNYTNQLMSTSENSQSIVHYNLTE 135

Query:   141 ALLFLSHFMGDVHQPMHVGFTSDEGGNTIELRWFRHKSNLHHVWDREIILTALADYYDKD 200
             AL+FLSH+MGD+HQP+H GF  D GGN I++ W+  ++NLH VWD  II +AL  YY+  
Sbjct:   136 ALMFLSHYMGDIHQPLHEGFIGDLGGNKIKVHWYNQETNLHRVWDDMIIESALETYYNSS 195

Query:   201 TELLLQDIVANFTDGVWHDDVSSWKDCD-NLMKCPNKYATESINMACKWGYKGVTPGETL 259
                ++ ++ A   +G W +DV SW+ C  N   CPN YA+ESI++ACK+ Y+  T G TL
Sbjct:   196 LPRMIHELQAKLKNG-WSNDVPSWESCQLNQTACPNPYASESIDLACKYAYRNATAGTTL 254

Query:   260 ADDYFNSRMPIVMKRIAQGGIRLAMFLNRIFS 291
              D YF SR+P+V KR+AQGGIRLA  LNRIFS
Sbjct:   255 GDYYFVSRLPVVEKRLAQGGIRLAGTLNRIFS 286

GO:0003676 "nucleic acid binding" evidence=IEA;ISS

GO:0004519 "endonuclease activity" evidence=IEA;ISS

GO:0005576 "extracellular region" evidence=ISM

GO:0006308 "DNA catabolic process" evidence=IEA;ISS

GO:0016788 "hydrolase activity, acting on ester bonds" evidence=IEA

GO:0000014 "single-stranded DNA specific endodeoxyribonuclease activity" evidence=IDA

GO:0043765 "T/G mismatch-specific endonuclease activity" evidence=IDA

GO:0009827 "plant-type cell wall modification" evidence=RCA

GO:0009860 "pollen tube growth" evidence=RCA

GO:0048441 "petal development" evidence=RCA

GO:0048443 "stamen development" evidence=RCA

GO:0048481 "ovule development" evidence=RCA

UNIPROTKB|G5EHU9 MGCH7_ch7g611 "Nuclease PA3" [Magnaporthe oryzae 70-15 (taxid:242507)]

 Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
 Identities = 77/285 (27%), Positives = 128/285 (44%)

Query:    21 PGAWGWSKEGHIMTCRIAQSLLEPDAAHAVENLLPQHVNGDLSALCVWPDQVRHWYRYRW 80
             PGA  W   GHI    +A   + P     ++ LL    +  L+ +  W D +R+     +
Sbjct:    17 PGALAWGSLGHITVAYLASRFVAPQTETYLQRLLRNDTDAYLAGVATWADSIRYTKWGHF 76

Query:    81 TSPLHFIDTPDD---ACTYEFSRDCHDTHGKKNMCIVGAIRNFTSQLLHYREGSSDRRHN 137
             T   HFID  DD   +C+ +  RDC D  G    C+V A++N+TS+++        R   
Sbjct:    77 TGVFHFIDAKDDPPRSCSVDMDRDCKD-QG----CVVTALQNYTSRMMDL---DRLREWE 128

Query:   138 MTEALLFLSHFMGDVHQPMHVGFTSDEGGNTIELRWFRHKSNLHHVWDREII------LT 191
               +A  F+ HF+GD+HQP+H    +  GGN I + W   + NLH VWD  I       + 
Sbjct:   129 RAQAAKFVVHFVGDMHQPLHDEDVA-RGGNGIHVLWHGREYNLHSVWDSAIAEQLRGGVR 187

Query:   192 ALADYYDKDTELLLQDIVANFTDGVWHDDVSSWKDCDNLMKCPNK---YATESINMACKW 248
                  YD   ++   ++      G +  +  +W D  +L         +A +     C  
Sbjct:   188 RGRGMYDA-AKVWADELEREVKAGRFRAESEAWLDGVDLADPVGTALIWARQGNAFVCSH 246

Query:   249 ----GYKGVTPGETLADDYFNSRMPIVMKRIAQGGIRLAMFLNRI 289
                 G + +  G+ L+  Y+    P++  ++A+ G RLA +L+ I
Sbjct:   247 VLPEGPEAIK-GQELSGKYYEEAAPVIESQVARAGFRLARWLDLI 290

GO:0005575 "cellular_component" evidence=ND

GENEDB_PFALCIPARUM|PF14_0117 PF14_0117 "hypothetical protein, conserved" [Plasmodium falciparum (taxid:5833)]

 Score = 94 (38.1 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
 Identities = 31/149 (20%), Positives = 66/149 (44%)

Query:    25 GWSKEGHIMTCRIAQSLLEPDAAHAVENLLPQHV-NGDLS--AL-CVWPDQVRHW-YRY- 78
             GW  EGH++   IA + L  D    ++++   +  + D +   L  VWPD ++++ Y Y 
Sbjct:    22 GWCDEGHMLVSAIAYNFLNDDEKTVLDHIFKNYKEDNDFNDPVLGSVWPDHIKYFNYNYP 81

Query:    79 ---RWTSPL------HFIDTPDDACTYEFSRDCHDTHGKKNMCIVGAIRNFTSQLLHYRE 129
                R    L      H+++ P +    + +    + + + +  I   +++    L + ++
Sbjct:    82 NKMRRIDGLELMNKWHYVNIPYNPTNIKLNMFQKEYYKRTDNAIT-ILKSIFKSLKNVKK 140

Query:   130 GSSDRRHNMTEALL-FLSHFMGDVHQPMH 157
               +         L+ +  H  GD+HQP+H
Sbjct:   141 KENHGTFFSYNFLIRYFIHIFGDIHQPLH 169

GO:0005575 "cellular_component" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q8ILX6 PF14_0117 "Putative uncharacterized protein" [Plasmodium falciparum 3D7 (taxid:36329)]

 Score = 94 (38.1 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
 Identities = 31/149 (20%), Positives = 66/149 (44%)

Query:    25 GWSKEGHIMTCRIAQSLLEPDAAHAVENLLPQHV-NGDLS--AL-CVWPDQVRHW-YRY- 78
             GW  EGH++   IA + L  D    ++++   +  + D +   L  VWPD ++++ Y Y 
Sbjct:    22 GWCDEGHMLVSAIAYNFLNDDEKTVLDHIFKNYKEDNDFNDPVLGSVWPDHIKYFNYNYP 81

Query:    79 ---RWTSPL------HFIDTPDDACTYEFSRDCHDTHGKKNMCIVGAIRNFTSQLLHYRE 129
                R    L      H+++ P +    + +    + + + +  I   +++    L + ++
Sbjct:    82 NKMRRIDGLELMNKWHYVNIPYNPTNIKLNMFQKEYYKRTDNAIT-ILKSIFKSLKNVKK 140

Query:   130 GSSDRRHNMTEALL-FLSHFMGDVHQPMH 157
               +         L+ +  H  GD+HQP+H
Sbjct:   141 KENHGTFFSYNFLIRYFIHIFGDIHQPLH 169

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9SXA6	ENDO1_ARATH	3, ., 1, ., 3, 0, ., 1	0.7399	0.9069	0.8950	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	3.1.30.1	LOW CONFIDENCE prediction!
3rd Layer	3.1.30	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	301
pfam02265	251	pfam02265, S1-P1_nuclease, S1/P1 Nuclease	1e-119
cd11010	249	cd11010, S1-P1_nuclease, S1/P1 nucleases and relat	7e-83
cd10981	238	cd10981, ZnPC_S1P1, Zinc dependent phospholipase C	2e-10

>gnl|CDD|216953 pfam02265, S1-P1_nuclease, S1/P1 Nuclease

 Score =  342 bits (879), Expect = e-119
 Identities = 121/267 (45%), Positives = 151/267 (56%), Gaps = 17/267 (6%)

Query: 26  WSKEGHIMTCRIAQSLLEPDAAHAVENLLPQHVNGDLSALCVWPDQVRHWYRYRWTSPLH 85
           W KEGH     IA+  L P A  AV+ LLP   +GDL+ +  W D +R   +YRWTSP H
Sbjct: 1   WGKEGHRTVAEIAERHLSPKARKAVQRLLPGL-DGDLAQVATWADDIRSDGKYRWTSPWH 59

Query: 86  FIDTPDDACTYEFSRDCHD-THGKKNMCIVGAIRNFTSQLLHYREGSSDRRHNMTEALLF 144
           +IDTPD+       RDCHD     K  C+V AI N+TSQL      S  R     EAL F
Sbjct: 60  YIDTPDNPP----PRDCHDAEDCPKEGCVVSAINNYTSQLKDTTASSDQR----AEALKF 111

Query: 145 LSHFMGDVHQPMHVGFTSDEGGNTIELRWFRHKSNLHHVWDREIILTALADYYDKDTELL 204
           L HF+GD+HQP+H G   D GGN I++RWF  K+NLH VWD  II TAL DYY       
Sbjct: 112 LVHFVGDIHQPLHAGRAGDRGGNDIKVRWFGRKTNLHSVWDSGIIETALGDYYRSSLSEW 171

Query: 205 LQDIVANFTDGVWHDDVSSWKDCDNLMKCPNKYATESINMACKWGYKGVTPGETLADDYF 264
              + A  T G        +KD       P  +A ES  +ACK  Y GVT G TL+D+Y+
Sbjct: 172 ADALEATITFG-------EYKDAWEPGTTPLDWAEESNALACKVVYPGVTNGATLSDEYY 224

Query: 265 NSRMPIVMKRIAQGGIRLAMFLNRIFS 291
           +S +P+V  ++A+ G RLA  LNRIF 
Sbjct: 225 DSALPVVELQLAKAGYRLAALLNRIFD 251

This family contains both S1 and P1 nucleases (EC:3.1.30.1) which cleave RNA and single stranded DNA with no base specificity. Length = 251

>gnl|CDD|211382 cd11010, S1-P1_nuclease, S1/P1 nucleases and related enzymes

 Score =  249 bits (638), Expect = 7e-83
 Identities = 91/267 (34%), Positives = 131/267 (49%), Gaps = 20/267 (7%)

Query: 26  WSKEGHIMTCRIAQSLLEPDAAHAVENLLPQHVNGDLSALCVWPDQVRHWYRYRWTSPLH 85
           W  EGH +   IA+  L P A  AV+ LL       L+    W D +R    Y+WT+P H
Sbjct: 1   WGAEGHRIVAEIAEQYLTPKARKAVDRLLGGLSGESLAEAATWADDIRSDPAYKWTAPWH 60

Query: 86  FIDTPDDACTYEFSRDCHDTHGKKNMCIVGAIRNFTSQLLHYREGSSDRRHNMTEALLFL 145
           +++ PD+ C +   RDC         C+V AI+N+T++L       ++R     EAL FL
Sbjct: 61  YVNIPDNPCKFYDERDC-----PPGGCVVSAIKNYTARLKDPSLSDAERA----EALKFL 111

Query: 146 SHFMGDVHQPMHVGFTSDEGGNTIELR-WFRHKSNLHHVWDREIILTALADYYDKDTELL 204
            HF+GD+HQP+HVG   D GGN  ++  WF  K+NLH VWD  +I  A   Y +    LL
Sbjct: 112 IHFVGDIHQPLHVGSREDGGGNDGDVGGWFGRKTNLHSVWDSGLIDKAKGSYTELAAALL 171

Query: 205 LQDIVANFTDGVWHDDVSSWKDCDNLMKCPNKYATESINMACKWGYKGVTPG-ETLADDY 263
              +      G+   D             P  +A ES  +AC+  Y  +      L+  Y
Sbjct: 172 AALLAEAIETGLEEADAE---------GDPADWAQESYELACEIYYPNLPGDTLELSYAY 222

Query: 264 FNSRMPIVMKRIAQGGIRLAMFLNRIF 290
           +    P+V +++A+ G RLA  LN IF
Sbjct: 223 YYKAKPVVEEQLAKAGYRLAAVLNEIF 249

This family summarizes both S1 and P1 nucleases (EC:3.1.30.1) which cleave RNA and single stranded DNA with no base specificity. S1 nuclease is more active on DNA than RNA. Its reaction products are oligonucleotides or single nucleotides with 5' phosphoryl groups. Although its primary substrate is single-stranded, it may also introduce single-stranded breaks in double-stranded DNA or RNA, or DNA-RNA hybrids. It is used as a reagent in nuclease protection assays and in removing single stranded tails from DNA molecules to create blunt ended molecules and opening hairpin loops generated during synthesis of double stranded cDNA. P1 nuclease cleaves its substrate at every position yielding nucleoside 5' monophosphates, and it does not recognize or act on double-stranded DNA. It is useful at removing single stranded strands hanging off the end of double stranded DNA and at completely cleaving melted DNA for simple DNA composition analysis. Length = 249

>gnl|CDD|211380 cd10981, ZnPC_S1P1, Zinc dependent phospholipase C/S1-P1 nuclease

 Score = 59.4 bits (144), Expect = 2e-10
 Identities = 37/157 (23%), Positives = 61/157 (38%), Gaps = 17/157 (10%)

Query: 30  GHIMTCRIAQSLLEPDAAHAVENLLPQHVNGDLSALCVWPDQVRHWYRYRWTSPLHFIDT 89
            H    R A   L P+ A    +LL ++++ +L    V PD+ R  Y     +  H +D 
Sbjct: 4   THHKIARDAVFTLPPELAEFWSDLLKRNID-ELLEGAVAPDKRR--YDDDGEAQNHVLD- 59

Query: 90  PDDACTYEFSRDCHDTHGKKNMCIVGAIRNFTSQLLHY-REGSSDRRHNMTEALLFLSHF 148
            DD       +   DT G         I+ +  +L+   R        ++  A   LSH+
Sbjct: 60  VDDYGDSALDKYGEDTLGY-WGGAPWQIQEWYQRLVDAFRRKDWK---DIAFAAGVLSHY 115

Query: 149 MGDVHQPMHVGFTSDEGGNTIELRWFRHKSNLHHVWD 185
           +GD H P+H    +  G  T +         +H  W+
Sbjct: 116 IGDAHVPLHTT-QNYNGQLTGQ-------DGIHRAWE 144

This model describes both the bacterial and archeal zinc-dependent phospholipase C, a domain found in the alpha toxin of Clostridium perfringens, as well as S1/P1 nucleases, which predominantly act on single-stranded DNA and RNA. Length = 238

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	301
PF02265	252	S1-P1_nuclease: S1/P1 Nuclease; InterPro: IPR00315	100.0
smart00770	241	Zn_dep_PLPC Zinc dependent phospholipase C (alpha	96.47

>PF02265 S1-P1_nuclease: S1/P1 Nuclease; InterPro: IPR003154 This family contains both S1 and P1 nucleases (3

Probab=100.00  E-value=1.6e-68  Score=484.31  Aligned_cols=248  Identities=35%  Similarity=0.693  Sum_probs=192.9

Q ss_pred             CChhHHHHHHHHHHhcCCHHHHHHHHhhCCCCCCCCccccCcccccccccc-CCCCCCCCcccCCCC--CCCCcccCCCc
Q 022165           26 WSKEGHIMTCRIAQSLLEPDAAHAVENLLPQHVNGDLSALCVWPDQVRHWY-RYRWTSPLHFIDTPD--DACTYEFSRDC  102 (301)
Q Consensus        26 Wg~~GH~~Va~IA~~~L~~~~~~~v~~lL~~~~~~~l~~~a~WaD~ir~~~-~~~~~~~wHyid~p~--~~~~~~~~~dc  102 (301)
                      ||..|||+||+||+++|+|+++++|++||+.....+|+++|+|||+||+.+ +++++.+|||+|+|.  ..|.+...++|
T Consensus         1 Wg~~GH~~va~iA~~~L~~~~~~~v~~il~~~~~~~l~~~A~WaD~ir~~~~~~~~~~~wHyi~~~~~~~~~~~~~~~~~   80 (252)
T PF02265_consen    1 WGAEGHRVVAEIAQRHLSPEARKKVDKILGGDSSESLAEAATWADDIRSDPAQYKWTAPWHYINQPDNKYPRDFQPARDC   80 (252)
T ss_dssp             --HHHHHHHHHHHHHHS-HHHHHHHHHHHT--STTTTGGGTTHHHHHHT-STTTGGGGGGG------BTTB----HHHHS
T ss_pred             CCcHHHHHHHHHHHHHCCHHHHHHHHHHhCccccccHHHHHHhHHHhhccccccCcCCCccccCCccccccccccccccC
Confidence            999999999999999999999999999999655589999999999999854 689999999999998  44556555677


Q ss_pred             cccCCCCCCcHHHHHHHHHHHhcCCCCCCccccccHHHHHHHHHHHhccCCCCcc-ccCCCCCCCCcEEeccCCcccCch
Q 022165          103 HDTHGKKNMCIVGAIRNFTSQLLHYREGSSDRRHNMTEALLFLSHFMGDVHQPMH-VGFTSDEGGNTIELRWFRHKSNLH  181 (301)
Q Consensus       103 ~~~~~~~~~~~~~aI~~~~~~L~~~~~s~~~~~~~~~~aLk~LiHlvGDiHQPLH-~~~~~D~GGN~i~v~~~g~~~nLH  181 (301)
                      ++     ++|++++|.+++++|++.+.+.    .+++++|||||||||||||||| +++++|+|||+++|+++|+++|||
T Consensus        81 ~~-----~~~~~~ai~~~~~~L~~~~~~~----~~~~~aL~~LvH~vGDiHQPLH~~~~~~D~GGN~~~v~~~g~~~nLH  151 (252)
T PF02265_consen   81 PN-----GGCVVSAIKNYTSRLKDTSTSK----AERAFALKFLVHLVGDIHQPLHTVGRKGDRGGNDIKVKFNGKKTNLH  151 (252)
T ss_dssp             -T-----T--HHHHHHHHHHHHT-TTS-H----HHHHHHHHHHHHHHHHTTSGGGG--H--HHHTTT-EEEETTEEEEHH
T ss_pred             CC-----CCcHHHHHHHHHHHHhccCCCc----HHHHHHHHHHHHHhhhccCccccccccccCCCCeeEEEecCCcCcHH
Confidence            64     8999999999999999987663    3789999999999999999999 678999999999999999999999


Q ss_pred             HHHhHhhHhHHhhccCCccHHHHHHHHHhhcCCCCcccccchhcccCCCCCChHHHHHHHHHHHhhhcCCCCCCCCCCCH
Q 022165          182 HVWDREIILTALADYYDKDTELLLQDIVANFTDGVWHDDVSSWKDCDNLMKCPNKYATESINMACKWGYKGVTPGETLAD  261 (301)
Q Consensus       182 ~vWDs~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~w~~~~~~~~~~~~Wa~ES~~la~~~vY~~~~~~~~ls~  261 (301)
                      ++||++|++......+..++.++++.|.+.++..    ....|..     .+|.+|+.||++++|+++|+..+.+.+|++
T Consensus       152 ~~WD~~l~~~~~~~~~~~~~~~~a~~L~~~~~~~----~~~~~~~-----~~~~~Wa~ES~~la~~~~y~~~~~~~~l~~  222 (252)
T PF02265_consen  152 SVWDSGLINYMIKNKYQSSWQEYADELDRKITKE----SFKSWQP-----GDPEDWANESHELACNIVYPGIKNGTELSD  222 (252)
T ss_dssp             HHHHTHHHHHHHS--SHHHHHHHHHHHHHHHHH--------HHHH-----HHHHHHHHHHHHHHHHTTSTT-SGGGS-TT
T ss_pred             HHHHHHHHHhhccccchhhHHHHHHHHHhhccch----hhhhhhh-----hhHHHHHHHHHHHHHHHHhccCCCCCccCH
Confidence            9999999988766545557788999998777632    4556643     389999999999999999988888888999


Q ss_pred             HHHhcHHHHHHHHHHHHHHHHHHHHHHhhC
Q 022165          262 DYFNSRMPIVMKRIAQGGIRLAMFLNRIFS  291 (301)
Q Consensus       262 ~Y~~~~~~~~~~ql~~AG~RLA~~Ln~i~~  291 (301)
                      +|++++++++++||++||+|||.+||+||+
T Consensus       223 ~Y~~~~~~~~~~ql~~AG~RLA~~Ln~i~~  252 (252)
T PF02265_consen  223 EYYTKARPVAEEQLAKAGYRLAAVLNEIFD  252 (252)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHH--
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence            999999999999999999999999999985

1.30.1 from EC) which cleave RNA and single stranded DNA with no base specificity. ; GO: 0003676 nucleic acid binding, 0004519 endonuclease activity, 0006308 DNA catabolic process; PDB: 1AK0_A.

>smart00770 Zn_dep_PLPC Zinc dependent phospholipase C (alpha toxin)

Probab=96.47  E-value=0.0046  Score=55.68  Aligned_cols=112  Identities=21%  Similarity=0.262  Sum_probs=62.6

Q ss_pred             hHHHHHHHHHHhcCCHH----HHHHHHhhCCCCCCCCccccCccccccccccCCCCCCCCcccCCCCCCCCcccCCCccc
Q 022165           29 EGHIMTCRIAQSLLEPD----AAHAVENLLPQHVNGDLSALCVWPDQVRHWYRYRWTSPLHFIDTPDDACTYEFSRDCHD  104 (301)
Q Consensus        29 ~GH~~Va~IA~~~L~~~----~~~~v~~lL~~~~~~~l~~~a~WaD~ir~~~~~~~~~~wHyid~p~~~~~~~~~~dc~~  104 (301)
                      .-|..|..=|.+.|...    ....| ++|... -..|..=.+|||.-..  .+. ..-+||.|... ..++-+.     
T Consensus        38 ~tH~~I~~qAi~iL~nd~~~~~~~~~-~~l~~y-~~~l~~G~~~aD~~~~--~~~-~~~~HFydp~~-~~~yL~~-----  106 (241)
T smart00770       38 NTHLFIVNQALEILKNDNNKNEYKLV-EILKKN-YKELKLGSTYADYDNK--YYD-LSQDHFYDPDT-GKNYLPG-----  106 (241)
T ss_pred             cHHHHHHHHHHHHHHhcCchhHHHHH-HHHHHH-HHHHHcCCcccccCcc--ccc-cccccccCCCC-CCCCCCC-----
Confidence            66999999999999544    22211 233211 2256677899998552  233 33789998533 2332111     


Q ss_pred             cCCCCCCcHHHHHHHHHHHhcCC-CCCCccccccHHHHHHHHHHHhccCCCCcccc
Q 022165          105 THGKKNMCIVGAIRNFTSQLLHY-REGSSDRRHNMTEALLFLSHFMGDVHQPMHVG  159 (301)
Q Consensus       105 ~~~~~~~~~~~aI~~~~~~L~~~-~~s~~~~~~~~~~aLk~LiHlvGDiHQPLH~~  159 (301)
                           ..........+.+.-... +....   ..--+.|-.-.|+++|+.||+|++
T Consensus       107 -----~~~A~~~~~ky~~~A~~~~~~g~~---~~A~~~LG~a~Hy~~D~~~P~Ha~  154 (241)
T smart00770      107 -----FSNAKDTGRKYFKLALNEWKKGNY---KKAFFYLGRACHYLGDLSTPYHAN  154 (241)
T ss_pred             -----CCcHHHHHHHHHHHHHHHHHcCCH---HHHHHHHHHHHHHHHhcCCccccc
Confidence                 122333433443333221 11111   012356777899999999999986

This domain conveys a zinc dependent phospholipase C activity (EC 3.1.4.3). It is found in a monomeric phospholipase C of Bacillus cereus as well as in the alpha toxin of Clostridium perfringens and Clostridium bifermentans, which is involved in haemolysis and cell rupture. It is also found in a lecithinase of Listeria monocytogenes, which is involved in breaking the 2-membrane vacuoles that surround the bacterium. Structure information: PDB 1ca1.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	301
3sng_A	277	X-ray Structure Of Fully Glycosylated Bifunctional		1e-131
4dj4_A	277	X-ray Structure Of Mutant N211d Of Bifunctional Nuc		1e-130
1ak0_A	270	P1 Nuclease In Complex With A Substrate Analog Leng		2e-23

>pdb|3SNG|A Chain A, X-ray Structure Of Fully Glycosylated Bifunctional Nuclease Tbn1 From Solanum Lycopersicum (tomato) Length = 277

Iteration: 1
 Score =  462 bits (1190), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 206/271 (76%), Positives = 239/271 (88%)
Query: 26  WSKEGHIMTCRIAQSLLEPDAAHAVENLLPQHVNGDLSALCVWPDQVRHWYRYRWTSPLH 85
           WSKEGH+MTCRIAQ LL  +AAHAV+ LLP++VNGDLSALCVWPDQVRHWY+Y+WTSPLH
Sbjct: 1   WSKEGHVMTCRIAQGLLNDEAAHAVKMLLPEYVNGDLSALCVWPDQVRHWYKYKWTSPLH 60
Query: 86  FIDTPDDACTYEFSRDCHDTHGKKNMCIVGAIRNFTSQLLHYREGSSDRRHNMTEALLFL 145
           FIDTPD AC +++ RDCHD HG K+MC+ GAI+NFT+QL HYREG+SDRR+NMTEALLFL
Sbjct: 61  FIDTPDKACNFDYERDCHDQHGVKDMCVAGAIQNFTTQLSHYREGTSDRRYNMTEALLFL 120
Query: 146 SHFMGDVHQPMHVGFTSDEGGNTIELRWFRHKSNLHHVWDREIILTALADYYDKDTELLL 205
           SHFMGD+HQPMHVGFTSD GGN+I+LRWFRHKSNLHHVWDREIILTA  DYY KD  LL 
Sbjct: 121 SHFMGDIHQPMHVGFTSDAGGNSIDLRWFRHKSNLHHVWDREIILTAAKDYYAKDINLLE 180
Query: 206 QDIVANFTDGVWHDDVSSWKDCDNLMKCPNKYATESINMACKWGYKGVTPGETLADDYFN 265
           +DI  NFTDG+W DD++SW++C N+  C NK+ATESIN+ACKWGYKGV  GETL+DDYFN
Sbjct: 181 EDIEGNFTDGIWSDDLASWRECGNVFSCVNKFATESINIACKWGYKGVEAGETLSDDYFN 240
Query: 266 SRMPIVMKRIAQGGIRLAMFLNRIFSDSDEE 296
           SR+PIVMKR+AQGGIRLAM LN +F  S +E
Sbjct: 241 SRLPIVMKRVAQGGIRLAMLLNNVFGASQQE 271

>pdb|4DJ4|A Chain A, X-ray Structure Of Mutant N211d Of Bifunctional Nuclease Tbn1 From Solanum Lycopersicum (tomato) Length = 277

Iteration: 1
 Score =  460 bits (1184), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 205/271 (75%), Positives = 239/271 (88%)
Query: 26  WSKEGHIMTCRIAQSLLEPDAAHAVENLLPQHVNGDLSALCVWPDQVRHWYRYRWTSPLH 85
           WSKEGH+MTCRIAQ LL  +AAHAV+ LLP++VNGDLSALCVWPDQVRHWY+Y+WTSPLH
Sbjct: 1   WSKEGHVMTCRIAQGLLNDEAAHAVKMLLPEYVNGDLSALCVWPDQVRHWYKYKWTSPLH 60
Query: 86  FIDTPDDACTYEFSRDCHDTHGKKNMCIVGAIRNFTSQLLHYREGSSDRRHNMTEALLFL 145
           FIDTPD AC +++ RDCHD HG K+MC+ GAI+NFT+QL HYREG+SDRR+NMTEALLFL
Sbjct: 61  FIDTPDKACNFDYERDCHDQHGVKDMCVAGAIQNFTTQLSHYREGTSDRRYNMTEALLFL 120
Query: 146 SHFMGDVHQPMHVGFTSDEGGNTIELRWFRHKSNLHHVWDREIILTALADYYDKDTELLL 205
           SHFMGD+HQPMHVGFTSD GGN+I+LRWFRHKSNLHHVWDREIILTA  DYY KD  LL 
Sbjct: 121 SHFMGDIHQPMHVGFTSDAGGNSIDLRWFRHKSNLHHVWDREIILTAAKDYYAKDINLLE 180
Query: 206 QDIVANFTDGVWHDDVSSWKDCDNLMKCPNKYATESINMACKWGYKGVTPGETLADDYFN 265
           +DI  +FTDG+W DD++SW++C N+  C NK+ATESIN+ACKWGYKGV  GETL+DDYFN
Sbjct: 181 EDIEGDFTDGIWSDDLASWRECGNVFSCVNKFATESINIACKWGYKGVEAGETLSDDYFN 240
Query: 266 SRMPIVMKRIAQGGIRLAMFLNRIFSDSDEE 296
           SR+PIVMKR+AQGGIRLAM LN +F  S +E
Sbjct: 241 SRLPIVMKRVAQGGIRLAMLLNNVFGASQQE 271

>pdb|1AK0|A Chain A, P1 Nuclease In Complex With A Substrate Analog Length = 270

Iteration: 1
 Score =  105 bits (263), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 79/278 (28%), Positives = 130/278 (46%), Gaps = 29/278 (10%)
Query: 26  WSKEGHIMTCRIAQSLLEPDAAHAVENLLPQHVNGDLSALCVWPDQVRHWYRYRWTSPLH 85
           W   GH     +AQ  + P+AA   + +L    +  L+++  W D+ R     +W++ LH
Sbjct: 1   WGALGHATVAYVAQHYVSPEAASWAQGILGSSSSSYLASIASWADEYRLTSAGKWSASLH 60
Query: 86  FIDTPDDA---CTYEFSRDCHDTHGKKNMCIVGAIRNFTSQLLHYREGSSDRRHNMTEAL 142
           FID  D+    C  ++ RDC       + C + AI N+T ++      SS    N  EAL
Sbjct: 61  FIDAEDNPPTNCNVDYERDC-----GSSGCSISAIANYTQRV----SDSSLSSENHAEAL 111
Query: 143 LFLSHFMGDVHQPMHVGFTSDE----GGNTIELRWFRHKSNLHHVWDREIILTALADYYD 198
            FL HF+GD+ QP+H     DE    GGN I + +  +  NLH  WD  +    +  +  
Sbjct: 112 RFLVHFIGDMTQPLH-----DEAYAVGGNKINVTFDGYHDNLHSDWDTYMPQKLIGGHAL 166
Query: 199 KDTELLLQDIVANFTDGVWHDDVSSWKDCDNL---MKCPNKYATESINMACKW----GYK 251
            D E   + +V N   G +      W   DN+   +    ++A+++  + C      G  
Sbjct: 167 SDAESWAKTLVQNIESGNYTAQAIGWIKGDNISEPITTATRWASDANALVCTVVMPHGAA 226
Query: 252 GVTPGETLADDYFNSRMPIVMKRIAQGGIRLAMFLNRI 289
            +  G+ L   Y++S +  +  +IA+GG RLA ++N I
Sbjct: 227 ALQTGD-LYPTYYDSVIDTIELQIAKGGYRLANWINEI 263

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	301
3sng_A	277	Nuclease; mainly alpha helical, trinuclear metal c	3e-95
1ak0_A	270	P1 nuclease; endonuclease, reaction mechanism, thi	1e-77
1ah7_A	245	Phospholipase C; phospholipid hydrolysis, hydrolas	6e-08

>3sng_A Nuclease; mainly alpha helical, trinuclear metal centre, 3'-nucleotidase, nucleic acids, mononucleotid cytosol membrane associated; HET: NAG BMA MAN BTB; 2.16A {Solanum lycopersicum} Length = 277

 Score =  281 bits (720), Expect = 3e-95
 Identities = 206/276 (74%), Positives = 240/276 (86%)

Query: 26  WSKEGHIMTCRIAQSLLEPDAAHAVENLLPQHVNGDLSALCVWPDQVRHWYRYRWTSPLH 85
           WSKEGH+MTCRIAQ LL  +AAHAV+ LLP++VNGDLSALCVWPDQVRHWY+Y+WTSPLH
Sbjct: 1   WSKEGHVMTCRIAQGLLNDEAAHAVKMLLPEYVNGDLSALCVWPDQVRHWYKYKWTSPLH 60

Query: 86  FIDTPDDACTYEFSRDCHDTHGKKNMCIVGAIRNFTSQLLHYREGSSDRRHNMTEALLFL 145
           FIDTPD AC +++ RDCHD HG K+MC+ GAI+NFT+QL HYREG+SDRR+NMTEALLFL
Sbjct: 61  FIDTPDKACNFDYERDCHDQHGVKDMCVAGAIQNFTTQLSHYREGTSDRRYNMTEALLFL 120

Query: 146 SHFMGDVHQPMHVGFTSDEGGNTIELRWFRHKSNLHHVWDREIILTALADYYDKDTELLL 205
           SHFMGD+HQPMHVGFTSD GGN+I+LRWFRHKSNLHHVWDREIILTA  DYY KD  LL 
Sbjct: 121 SHFMGDIHQPMHVGFTSDAGGNSIDLRWFRHKSNLHHVWDREIILTAAKDYYAKDINLLE 180

Query: 206 QDIVANFTDGVWHDDVSSWKDCDNLMKCPNKYATESINMACKWGYKGVTPGETLADDYFN 265
           +DI  NFTDG+W DD++SW++C N+  C NK+ATESIN+ACKWGYKGV  GETL+DDYFN
Sbjct: 181 EDIEGNFTDGIWSDDLASWRECGNVFSCVNKFATESINIACKWGYKGVEAGETLSDDYFN 240

Query: 266 SRMPIVMKRIAQGGIRLAMFLNRIFSDSDEEFAAAT 301
           SR+PIVMKR+AQGGIRLAM LN +F  S +E +   
Sbjct: 241 SRLPIVMKRVAQGGIRLAMLLNNVFGASQQEDSVVA 276

>1ak0_A P1 nuclease; endonuclease, reaction mechanism, thiophosphory oligonucleotides, glycosylated protein; HET: NAG ADS THS; 1.80A {Penicillium citrinum} SCOP: a.124.1.2 Length = 270

 Score =  236 bits (603), Expect = 1e-77
 Identities = 75/278 (26%), Positives = 124/278 (44%), Gaps = 19/278 (6%)

Query: 26  WSKEGHIMTCRIAQSLLEPDAAHAVENLLPQHVNGDLSALCVWPDQVRHWYRYRWTSPLH 85
           W   GH     +AQ  + P+AA   + +L    +  L+++  W D+ R     +W++ LH
Sbjct: 1   WGALGHATVAYVAQHYVSPEAASWAQGILGSSSSSYLASIASWADEYRLTSAGKWSASLH 60

Query: 86  FIDTPDD---ACTYEFSRDCHDTHGKKNMCIVGAIRNFTSQLLHYREGSSDRRHNMTEAL 142
           FID  D+    C  ++ RDC  +      C + AI N+T ++      SS    N  EAL
Sbjct: 61  FIDAEDNPPTNCNVDYERDCGSSG-----CSISAIANYTQRVSD----SSLSSENHAEAL 111

Query: 143 LFLSHFMGDVHQPMHVGFTSDEGGNTIELRWFRHKSNLHHVWDREIILTALADYYDKDTE 202
            FL HF+GD+ QP+H       GGN I + +  +  NLH  WD  +    +  +   D E
Sbjct: 112 RFLVHFIGDMTQPLHDEAY-AVGGNKINVTFDGYHDNLHSDWDTYMPQKLIGGHALSDAE 170

Query: 203 LLLQDIVANFTDGVWHDDVSSWKDCDNL---MKCPNKYATESINMACKWGYK---GVTPG 256
              + +V N   G +      W   DN+   +    ++A+++  + C             
Sbjct: 171 SWAKTLVQNIESGNYTAQAIGWIKGDNISEPITTATRWASDANALVCTVVMPHGAAALQT 230

Query: 257 ETLADDYFNSRMPIVMKRIAQGGIRLAMFLNRIFSDSD 294
             L   Y++S +  +  +IA+GG RLA ++N I     
Sbjct: 231 GDLYPTYYDSVIDTIELQIAKGGYRLANWINEIHGSEI 268

>1ah7_A Phospholipase C; phospholipid hydrolysis, hydrolase; 1.50A {Bacillus cereus} SCOP: a.124.1.1 PDB: 2ffz_A 1p5x_A 1p6d_A* 1p6e_A* 2fgn_A 2huc_A Length = 245

 Score = 51.5 bits (122), Expect = 6e-08
 Identities = 46/278 (16%), Positives = 80/278 (28%), Gaps = 47/278 (16%)

Query: 23  AWGWSKEG---HIMTCRIAQSLLEPDAAHAVENLLPQHVN--GDLSALCVWPDQVRHWYR 77
           A    KEG   H+     A  ++  +     ++ + Q      +L       D    +Y 
Sbjct: 3   AEDKHKEGVNSHLWIVNRAIDIMSRNTTLVKQDRVAQLNEWRTELENGIYAADYENPYYD 62

Query: 78  YRWTSPLHFIDTPDDACTYEFSRDCHDTHGKKNMCIVGAIRNFTSQLLHYREGSSDRRHN 137
               +  HF D PD+  TY          G K          F      Y+        +
Sbjct: 63  NSTFAS-HFYD-PDNGKTYIPFAKQAKETGAKY---------FKLAGESYKNK------D 105

Query: 138 MTEALLFL---SHFMGDVHQPMHVGFTSDEGGNTIELRWFRHKSNLHHVWDREIILTALA 194
           M +A  +L    H++GDV+QPMH                  +    H  +  E  +  + 
Sbjct: 106 MKQAFFYLGLSLHYLGDVNQPMHAA----------NFTNLSYPQGFHSKY--ENFVDTIK 153

Query: 195 DYYDKDTELLLQDIVANFTDGVWHDDVSSWKDCDNLMKCPNKYATESINMACKWGYKGVT 254
           D Y         +            +   W           +  +  +N   K  +    
Sbjct: 154 DNYKVTDGNGYWNWKGT--------NPEEW--IHGAAVVAKQDYSGIVNDNTKDWFVKAA 203

Query: 255 PGETLADDYFNSRMPIVMKRIAQGGIRLAMFLNRIFSD 292
             +  AD +     P+  KR+       A ++   F  
Sbjct: 204 VSQEYADKWRAEVTPMTGKRLMDAQRVTAGYIQLWFDT 241

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	301
3sng_A	277	Nuclease; mainly alpha helical, trinuclear metal c	100.0
1ak0_A	270	P1 nuclease; endonuclease, reaction mechanism, thi	100.0
1ah7_A	245	Phospholipase C; phospholipid hydrolysis, hydrolas	100.0
1olp_A	370	Alpha-toxin; zinc phospholipase C, GAS gangrene de	94.02
2wxu_A	370	Phospholipase C; cytolysis, hydrolase, hemolysis,	93.87

>3sng_A Nuclease; mainly alpha helical, trinuclear metal centre, 3'-nucleotidase, nucleic acids, mononucleotid cytosol membrane associated; HET: NAG BMA MAN BTB; 2.16A {Solanum lycopersicum} PDB: 4dj4_A*

Probab=100.00  E-value=1.9e-79  Score=560.68  Aligned_cols=276  Identities=75%  Similarity=1.364  Sum_probs=244.9

Q ss_pred             CChhHHHHHHHHHHhcCCHHHHHHHHhhCCCCCCCCccccCccccccccccCCCCCCCCcccCCCCCCCCcccCCCcccc
Q 022165           26 WSKEGHIMTCRIAQSLLEPDAAHAVENLLPQHVNGDLSALCVWPDQVRHWYRYRWTSPLHFIDTPDDACTYEFSRDCHDT  105 (301)
Q Consensus        26 Wg~~GH~~Va~IA~~~L~~~~~~~v~~lL~~~~~~~l~~~a~WaD~ir~~~~~~~~~~wHyid~p~~~~~~~~~~dc~~~  105 (301)
                      ||..|||+||+||+++|+|+++++|++||+.+.+.+|+++|+|||+||++++|+|+++|||+|+|++.|.++|.+||++.
T Consensus         1 Wg~~GH~~Va~IA~~~L~~~~~~~v~~lL~~~~~~~l~~~a~WaD~ir~~~~~~~~~~wHyid~p~~~c~~~~~rdc~~~   80 (277)
T 3sng_A            1 WSKEGHVMTCRIAQGLLNDEAAHAVKMLLPEYVNGDLSALCVWPDQVRHWYKYKWTSPLHFIDTPDKACNFDYERDCHDQ   80 (277)
T ss_dssp             CCHHHHHHHHHHHHTTCCHHHHHHHHHHSCGGGTTCGGGTTTHHHHHTTSGGGGGGGGGGCCCBCTTTCCCCHHHHCBCT
T ss_pred             CCcHHHHHHHHHHHHHCCHHHHHHHHHHhCcccccCHHHHhhhHhhhcccccccccCcceeecCCCCcCCCcccCCcccc
Confidence            99999999999999999999999999999976678999999999999988889999999999999999999999999875


Q ss_pred             CCCCCCcHHHHHHHHHHHhcCCCCCCccccccHHHHHHHHHHHhccCCCCccccCCCCCCCCcEEeccCCcccCchHHHh
Q 022165          106 HGKKNMCIVGAIRNFTSQLLHYREGSSDRRHNMTEALLFLSHFMGDVHQPMHVGFTSDEGGNTIELRWFRHKSNLHHVWD  185 (301)
Q Consensus       106 ~~~~~~~~~~aI~~~~~~L~~~~~s~~~~~~~~~~aLk~LiHlvGDiHQPLH~~~~~D~GGN~i~v~~~g~~~nLH~vWD  185 (301)
                      .+++++|+++||.+++++|++.+.+.....+++.+|||||||||||||||||+++.+|+|||+|+|+|+|+++|||+|||
T Consensus        81 ~~~~~~cvv~aI~~~t~~L~~~~~~~~~~~~~~~~aLkfLvHfvGDiHQPLH~g~~~D~GGN~i~V~~~g~~~NLH~vWD  160 (277)
T 3sng_A           81 HGVKDMCVAGAIQNFTTQLSHYREGTSDRRYNMTEALLFLSHFMGDIHQPMHVGFTSDAGGNSIDLRWFRHKSNLHHVWD  160 (277)
T ss_dssp             TCCBTCSHHHHHHHHHHHHTTTTTCCCCTTCCHHHHHHHHHHHHHHHHSGGGGCBTTTTTTTTCEEEETTEEEEHHHHHH
T ss_pred             cCCCcchHHHHHHHHHHHHcCCCCcccCChHHHHHHHHHHHHHhccccCCccCCCCcCCCCCeEEEEECCccCchHHHHH
Confidence            55679999999999999999875211111458999999999999999999999999999999999999999999999999


Q ss_pred             HhhHhHHhhccCCccHHHHHHHHHhhcCCCCcccccchhcccCCCCCChHHHHHHHHHHHhhhcCCCCCCCCCCCHHHHh
Q 022165          186 REIILTALADYYDKDTELLLQDIVANFTDGVWHDDVSSWKDCDNLMKCPNKYATESINMACKWGYKGVTPGETLADDYFN  265 (301)
Q Consensus       186 s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~w~~~~~~~~~~~~Wa~ES~~la~~~vY~~~~~~~~ls~~Y~~  265 (301)
                      ++|+++..+.++..++.+|++.|.++++.+.|.+++++|..|.+...||.+|+.||+++||++||+..++|.+|+++|++
T Consensus       161 s~ii~~~~~~~~~~~~~~~a~~L~~~i~~~~~~~~~~~w~~~~~~~~~~~~Wa~ES~~la~~~vY~~~~~~~~L~~~Y~~  240 (277)
T 3sng_A          161 REIILTAAKDYYAKDINLLEEDIEGNFTDGIWSDDLASWRECGNVFSCVNKFATESINIACKWGYKGVEAGETLSDDYFN  240 (277)
T ss_dssp             THHHHHHHHHHHTTCHHHHHHHHHHHHHTSTTTTTHHHHHCCCSHHHHHHHHHHHHHHHHHHTTSTTCCTTCEECHHHHH
T ss_pred             hhhhhhhhccccccCHHHHHHHHHHHhhcccchhHHHHHhhcccccCCHHHHHHHHHHHHHHHhccCCCCCCccCHHHHH
Confidence            99999887776777889999999888887668888889987766667999999999999999999988888899999999


Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHHhhCCCC-hhhhhcC
Q 022165          266 SRMPIVMKRIAQGGIRLAMFLNRIFSDSD-EEFAAAT  301 (301)
Q Consensus       266 ~~~~~~~~ql~~AG~RLA~~Ln~i~~~~~-~~~~~~~  301 (301)
                      +++|++|+||++||||||.+||.||+++. +.++.||
T Consensus       241 ~~~~i~e~qla~aG~RLA~~LN~i~~~~~~~~~~~~~  277 (277)
T 3sng_A          241 SRLPIVMKRVAQGGIRLAMLLNNVFGASQQEDSVVAT  277 (277)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHCC----------
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCC
Confidence            99999999999999999999999999877 6666654

>1ak0_A P1 nuclease; endonuclease, reaction mechanism, thiophosphory oligonucleotides, glycosylated protein; HET: NAG ADS THS; 1.80A {Penicillium citrinum} SCOP: a.124.1.2

Probab=100.00  E-value=1.1e-71  Score=508.58  Aligned_cols=260  Identities=28%  Similarity=0.508  Sum_probs=227.7

Q ss_pred             CChhHHHHHHHHHHhcCCHHHHHHHHhhCCCCCCCCccccCccccccccccCCCCCCCCcccCCCC---CCCCcccCCCc
Q 022165           26 WSKEGHIMTCRIAQSLLEPDAAHAVENLLPQHVNGDLSALCVWPDQVRHWYRYRWTSPLHFIDTPD---DACTYEFSRDC  102 (301)
Q Consensus        26 Wg~~GH~~Va~IA~~~L~~~~~~~v~~lL~~~~~~~l~~~a~WaD~ir~~~~~~~~~~wHyid~p~---~~~~~~~~~dc  102 (301)
                      ||.+|||+||+||+++|+|+++++|++||+.+++.+|+++|+|||+||+.+.|+++++|||+|+|.   ..|.+++.++|
T Consensus         1 Wg~~GH~~va~iA~~~L~~~~~~~v~~lL~~~~~~~l~~~a~WaD~ir~~~~~~~~~~wHyid~~~~p~~~c~~~~~rdc   80 (270)
T 1ak0_A            1 WGALGHATVAYVAQHYVSPEAASWAQGILGSSSSSYLASIASWADEYRLTSAGKWSASLHFIDAEDNPPTNCNVDYERDC   80 (270)
T ss_dssp             CCHHHHHHHHHHHHHHSCHHHHHHHHHHHTCCSTTTTGGGTTHHHHHHTSTTTGGGGGGGCCCCCCBTTTBCCCCHHHHS
T ss_pred             CCcHHHHHHHHHHHHHCCHHHHHHHHHHhCCCCcccHHHHccchhhcccCCCCCccccccCCCCcCCCCcCCCCcccCCC
Confidence            999999999999999999999999999999766677999999999999877789999999999964   56999999999


Q ss_pred             cccCCCCCCcHHHHHHHHHHHhcCCCCCCccccccHHHHHHHHHHHhccCCCCccccCCCCCCCCcEEeccCCcccCchH
Q 022165          103 HDTHGKKNMCIVGAIRNFTSQLLHYREGSSDRRHNMTEALLFLSHFMGDVHQPMHVGFTSDEGGNTIELRWFRHKSNLHH  182 (301)
Q Consensus       103 ~~~~~~~~~~~~~aI~~~~~~L~~~~~s~~~~~~~~~~aLk~LiHlvGDiHQPLH~~~~~D~GGN~i~v~~~g~~~nLH~  182 (301)
                      ++     ++|+++||++++++|++.+.+    .+++.++||||+|||||||||||++ .+|+|||+|+|+|+|+++|||+
T Consensus        81 ~~-----~~cv~~ai~~~~~~L~~~~~s----~~~~~~aL~fLvH~vGDiHQPLH~~-~~D~GGN~i~V~~~g~~~nLH~  150 (270)
T 1ak0_A           81 GS-----SGCSISAIANYTQRVSDSSLS----SENHAEALRFLVHFIGDMTQPLHDE-AYAVGGNKINVTFDGYHDNLHS  150 (270)
T ss_dssp             CT-----TCCHHHHHHHHHHHHTCTTSC----HHHHHHHHHHHHHHHHHTTSGGGGC-CHHHHTTTCEEEETTEEEEHHH
T ss_pred             CC-----cccHHHHHHHHHHHHccCCCC----HHHHHHHHHHHHHHcccccCcccCc-CcCCCCCeEEEEECCccCccHH
Confidence            75     899999999999999996654    4588999999999999999999999 6899999999999999999999


Q ss_pred             HHhHhhHhHHhhccCCccHHHHHHHHHhhcCCCCcccccchhcccC---CCCCChHHHHHHHHHHHhhhcCCCC---CCC
Q 022165          183 VWDREIILTALADYYDKDTELLLQDIVANFTDGVWHDDVSSWKDCD---NLMKCPNKYATESINMACKWGYKGV---TPG  256 (301)
Q Consensus       183 vWDs~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~w~~~~---~~~~~~~~Wa~ES~~la~~~vY~~~---~~~  256 (301)
                      |||++|+++..+.++..+..+|++.|.+.++.+.|.++.+.|..|.   +...||..|+.||++++|++||+..   .++
T Consensus       151 vWDs~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~wa~ES~~la~~~vY~~~~~~~~~  230 (270)
T 1ak0_A          151 DWDTYMPQKLIGGHALSDAESWAKTLVQNIESGNYTAQAIGWIKGDNISEPITTATRWASDANALVCTVVMPHGAAALQT  230 (270)
T ss_dssp             HHHTHHHHHHHSCCSHHHHHHHHHHHHHHHHHSTTHHHHHHHHTTCCTTCHHHHHHHHHHHHHHHHHHTTSTTCSGGGSS
T ss_pred             HHhccchhhhccccCcchHHHHHHHHHHhcccCCCchhHHHhhcCccccccccCHHHHHHHHHHHHHHHhcccCcccccC
Confidence            9999999887666555567788999988877666777788887654   2346899999999999999999753   346


Q ss_pred             CCCCHHHHhcHHHHHHHHHHHHHHHHHHHHHHhhCCCCh
Q 022165          257 ETLADDYFNSRMPIVMKRIAQGGIRLAMFLNRIFSDSDE  295 (301)
Q Consensus       257 ~~ls~~Y~~~~~~~~~~ql~~AG~RLA~~Ln~i~~~~~~  295 (301)
                      .+|+++|+.++++++|+||++||+|||.+||.||++.++
T Consensus       231 ~~l~~~Y~~~~~~v~e~qla~aG~RLA~~Ln~i~~~~~~  269 (270)
T 1ak0_A          231 GDLYPTYYDSVIDTIELQIAKGGYRLANWINEIHGSEIA  269 (270)
T ss_dssp             SBCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-----
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence            789999999999999999999999999999999998765

>1ah7_A Phospholipase C; phospholipid hydrolysis, hydrolase; 1.50A {Bacillus cereus} SCOP: a.124.1.1 PDB: 2ffz_A 1p5x_A 1p6d_A* 1p6e_A* 2fgn_A 2huc_A

Probab=100.00  E-value=1.5e-43  Score=318.51  Aligned_cols=215  Identities=18%  Similarity=0.218  Sum_probs=162.5

Q ss_pred             ChhHHHHHHHHHHhcCCHHHHHHHH---hhCCCCCCCCccccCccccccccccCC-CCCCCCcccCCCCCCCCcccCCCc
Q 022165           27 SKEGHIMTCRIAQSLLEPDAAHAVE---NLLPQHVNGDLSALCVWPDQVRHWYRY-RWTSPLHFIDTPDDACTYEFSRDC  102 (301)
Q Consensus        27 g~~GH~~Va~IA~~~L~~~~~~~v~---~lL~~~~~~~l~~~a~WaD~ir~~~~~-~~~~~wHyid~p~~~~~~~~~~dc  102 (301)
                      |..||+.|+++|.+.|+......++   ..+..+ ...|...|+|||+ |. +.| +++.+|||+|+|.+ |++.+.++|
T Consensus        10 ~~~tH~~I~~~A~~~L~~~~~~~~~~~~~~~~~w-~D~i~~~~~w~D~-k~-~~~~~~~~~~Hy~d~~~~-~~~~~~~~~   85 (245)
T 1ah7_A           10 GVNSHLWIVNRAIDIMSRNTTLVKQDRVAQLNEW-RTELENGIYAADY-EN-PYYDNSTFASHFYDPDNG-KTYIPFAKQ   85 (245)
T ss_dssp             GGCHHHHHHHHHHHHHHHCCSSCCHHHHHHHHHT-HHHHHHHHHHTTT-ST-TTTTTTTCGGGCCBTTTT-BCSSTTCCC
T ss_pred             CCcHHHHHHHHHHHHhccccchHHHHHHHHHHhC-HHHHHhcCcCCCc-cc-ccccccCCCcccccCCCC-CCCCCCCCC
Confidence            6789999999999999766422111   112221 2246666888888 63 444 78999999999865 999888999


Q ss_pred             cccCCCCCCcHHHHHHHHHHHhcCCCCCCccccccHHHHHHHHHHHhccCCCCccccCCCCCCCCcEEeccCCcccCchH
Q 022165          103 HDTHGKKNMCIVGAIRNFTSQLLHYREGSSDRRHNMTEALLFLSHFMGDVHQPMHVGFTSDEGGNTIELRWFRHKSNLHH  182 (301)
Q Consensus       103 ~~~~~~~~~~~~~aI~~~~~~L~~~~~s~~~~~~~~~~aLk~LiHlvGDiHQPLH~~~~~D~GGN~i~v~~~g~~~nLH~  182 (301)
                      ..      +|++.+|.++++.+++.+      ..++.++|+||+|||||||||||       |||.+.   +|+.+|||+
T Consensus        86 ~~------~~~~~~~~~~~~~l~~~~------~~~~~~aL~~l~H~vGDiHQPlH-------~gn~~~---~~~~~nlH~  143 (245)
T 1ah7_A           86 AK------ETGAKYFKLAGESYKNKD------MKQAFFYLGLSLHYLGDVNQPMH-------AANFTN---LSYPQGFHS  143 (245)
T ss_dssp             HH------HHHHHHHHHHHHHHHTTC------HHHHHHHHHHHHHHHHHHTSTTT-------TTTCCT---TSSSTTHHH
T ss_pred             cc------hHHHHHHHHHHHHHHcCC------HHHHHHHHHHHHHHHHhcCCCCC-------CCcccc---CCCCCCchH
Confidence            63      399999999999998753      23779999999999999999999       677776   578899999


Q ss_pred             HHhHhhHhHHhhccCCccHHHHHHHHHhhcCCCCcccccchhcccCCCCCChHHHHHHHHHHHhhhcCCCCCCCCCCCHH
Q 022165          183 VWDREIILTALADYYDKDTELLLQDIVANFTDGVWHDDVSSWKDCDNLMKCPNKYATESINMACKWGYKGVTPGETLADD  262 (301)
Q Consensus       183 vWDs~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~w~~~~~~~~~~~~Wa~ES~~la~~~vY~~~~~~~~ls~~  262 (301)
                      +|| .+++..... +..            ..    .++...|.     ..||.+|+.||+++ |+.+|+.+..+.. +.+
T Consensus       144 ~WD-~~i~~~~~~-y~~------------~~----~~~~~~~~-----~~~~~~W~~Es~~~-a~~~Y~~~~~~~~-~~~  198 (245)
T 1ah7_A          144 KYE-NFVDTIKDN-YKV------------TD----GNGYWNWK-----GTNPEEWIHGAAVV-AKQDYSGIVNDNT-KDW  198 (245)
T ss_dssp             HHH-HHHHHHGGG-GCC------------CS----SCCCTTCS-----CSCHHHHHHHHHHH-HHHTGGGTSSHHH-HHH
T ss_pred             HHH-HHHHHHhhc-ccc------------cc----hHHHHHHh-----cCCHHHHHHHHHHH-HHHHhccccCCCc-ccc
Confidence            999 788753221 110            11    11233443     25899999999999 6679987655544 666


Q ss_pred             HHh---------c----HHHHHHHHHHHHHHHHHHHHHHhhCC
Q 022165          263 YFN---------S----RMPIVMKRIAQGGIRLAMFLNRIFSD  292 (301)
Q Consensus       263 Y~~---------~----~~~~~~~ql~~AG~RLA~~Ln~i~~~  292 (301)
                      |+.         +    +++++++||++||+|||.+||.||++
T Consensus       199 Y~~~~~~~~~~~~~~~~~~~v~~~qL~~aG~RLA~~Ln~i~~~  241 (245)
T 1ah7_A          199 FVKAAVSQEYADKWRAEVTPMTGKRLMDAQRVTAGYIQLWFDT  241 (245)
T ss_dssp             HHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhhccchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            774         5    99999999999999999999999963

>1olp_A Alpha-toxin; zinc phospholipase C, GAS gangrene determinant, membrane binding, calcium binding, hydrolase; 2.5A {Clostridium absonum} SCOP: a.124.1.1 b.12.1.3

Probab=94.02  E-value=0.2  Score=46.58  Aligned_cols=219  Identities=17%  Similarity=0.177  Sum_probs=106.4

Q ss_pred             hhHHHHHHHHHHhcCCHH-------HHHHHHhhCCCCCCCCccccCccccccccccCCCCCCCCcccCCCCCCCCcccCC
Q 022165           28 KEGHIMTCRIAQSLLEPD-------AAHAVENLLPQHVNGDLSALCVWPDQVRHWYRYRWTSPLHFIDTPDDACTYEFSR  100 (301)
Q Consensus        28 ~~GH~~Va~IA~~~L~~~-------~~~~v~~lL~~~~~~~l~~~a~WaD~ir~~~~~~~~~~wHyid~p~~~~~~~~~~  100 (301)
                      ..-|..|+.=|.+.|...       ..+.-.++|... ...|-+=++|||.=..  .+. ...-||.|...+ .++....
T Consensus         8 ~~TH~~I~~qAl~iL~nd~~~~~~~~~k~~~~~L~~y-~~~l~~Gs~~pD~d~k--~~~-~f~~Hfydp~~~-~~~~~~~   82 (370)
T 1olp_A            8 TGTHSVIVTQAIEMLKHDLSKDEPEAIRNDLSILEKN-LHKFQLGSTFPDYDPN--AYS-LYQDHFWDPDTD-HNFTQDN   82 (370)
T ss_dssp             BSHHHHHHHHHHHHHHHHCCTTSCHHHHHHHHHHHHT-HHHHHHHHHGGGGCTT--CCT-TCGGGCCBTTTT-BCHHHHS
T ss_pred             CchHHHHHHHHHHHHhhcCccchhhHHHHHHHHHHHH-HHHHHcCCcccccCCc--ccc-ccccccccCCCC-CCccccc
Confidence            456899999888888322       223333333211 2246666899997322  121 233599875332 2221000


Q ss_pred             Cc-cccCCCCCCcHHHHHHHHHHHhcC-CCCCCccccccHHHHHHHHHHHhccCCCCcccc-C-CCCCCCCcEEeccCCc
Q 022165          101 DC-HDTHGKKNMCIVGAIRNFTSQLLH-YREGSSDRRHNMTEALLFLSHFMGDVHQPMHVG-F-TSDEGGNTIELRWFRH  176 (301)
Q Consensus       101 dc-~~~~~~~~~~~~~aI~~~~~~L~~-~~~s~~~~~~~~~~aLk~LiHlvGDiHQPLH~~-~-~~D~GGN~i~v~~~g~  176 (301)
                      .- .. ... ..........+++.-.+ -+....   -.-.+.|-..+|+|+|+.||+|+. . .-|.+           
T Consensus        83 ~w~~~-~~~-~~tA~~~~~ky~~~A~~~~~~g~~---~~A~~~LG~a~Hy~~D~~~P~Ha~n~t~~~~~-----------  146 (370)
T 1olp_A           83 KWYLS-YAV-PDNAESQTRKFATLAKNEWDKGNY---EKAAWYLGQGMHYFGDLNTPYHAANVTAVDSP-----------  146 (370)
T ss_dssp             GGGGG-GCC-SCCHHHHHHHHHHHHHHHHHHTCH---HHHHHHHHHHHHHHHHHTSHHHHTTCCTTTCH-----------
T ss_pred             ccccc-cCC-CCcHHHHHHHHHHHHHHHHHcCCH---HHHHHHHHHHHHHhhcCCCCcccccccccCCc-----------
Confidence            00 00 000 11233333444433222 111111   123577888999999999999994 1 11111           


Q ss_pred             ccCchHHHhHhhHhHHhhccCCccHHHHHHHHHhhcCCCCcccccchhcccCCCCCChHHHHHHHHHH----HhhhcCCC
Q 022165          177 KSNLHHVWDREIILTALADYYDKDTELLLQDIVANFTDGVWHDDVSSWKDCDNLMKCPNKYATESINM----ACKWGYKG  252 (301)
Q Consensus       177 ~~nLH~vWDs~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~w~~~~~~~~~~~~Wa~ES~~l----a~~~vY~~  252 (301)
                         -|+-.+.-+.... .. |             .+..++......-+.. .....++.+|+.|....    +.+.-|+.
T Consensus       147 ---gH~~yE~~V~~~~-~~-y-------------~i~t~g~~~~~~~y~~-~~~~~~~~~Wi~e~a~~~Ak~a~~~Y~~~  207 (370)
T 1olp_A          147 ---GHVKFETYAEERK-DT-Y-------------RLDTTGYNTDDAFYKD-TLKNDNFNEWSKGYCKYWAKKAKNLYYSH  207 (370)
T ss_dssp             ---HHHHHHHHHHHHG-GG-G-------------CCSCCSSCTTSHHHHG-GGSCSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ---CHHHHHHHHHHhh-hh-e-------------eeccCCcccccceeec-ccccCCHHHHHHHHHHHHHHHHHHHHHhc
Confidence               1877777554321 10 0             1211110000000000 01235899999998774    44322222


Q ss_pred             CCCCCCCCHHHHhcHHHHHHHHHHHHHHHHHHHHHHhhC
Q 022165          253 VTPGETLADDYFNSRMPIVMKRIAQGGIRLAMFLNRIFS  291 (301)
Q Consensus       253 ~~~~~~ls~~Y~~~~~~~~~~ql~~AG~RLA~~Ln~i~~  291 (301)
                      .. .......|    ..+++.+|..|=..+|.+|..++.
T Consensus       208 ~~-~~~~~~~~----~~~a~~~L~~AQ~~TAGfl~~f~~  241 (370)
T 1olp_A          208 AT-MSNSWDDW----EYAASHGVGNAQKGVAGYLYRFLN  241 (370)
T ss_dssp             CS-TTSCHHHH----HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cc-ccCcHHHH----HHHHHHHHHHHHHHHHHHHHHHHH
Confidence            11 11222344    677778888888888988877764

>2wxu_A Phospholipase C; cytolysis, hydrolase, hemolysis, membrane binding, virulence gangrene determinant, C2 domain; 1.80A {Clostridium perfringens} PDB: 2wy6_A 2wxt_A 1qm6_A 1qmd_A 1ca1_A 1gyg_A 1kho_A

Probab=93.87  E-value=0.26  Score=45.82  Aligned_cols=218  Identities=18%  Similarity=0.166  Sum_probs=103.6

Q ss_pred             hhHHHHHHHHHHhcCCHH-------HHHHHHhhCCCCCCCCccccCccccccccccCCCCCCCCcccCCCCCCCCcccCC
Q 022165           28 KEGHIMTCRIAQSLLEPD-------AAHAVENLLPQHVNGDLSALCVWPDQVRHWYRYRWTSPLHFIDTPDDACTYEFSR  100 (301)
Q Consensus        28 ~~GH~~Va~IA~~~L~~~-------~~~~v~~lL~~~~~~~l~~~a~WaD~ir~~~~~~~~~~wHyid~p~~~~~~~~~~  100 (301)
                      ..-|..|+.=|.+.|...       ..+.-.++|... ...|-+=++|||.=..  .+. ..--||.|...+ .++....
T Consensus         8 ~~TH~~I~~qAl~iL~nd~~~~~~~~~k~~~~~L~~y-~~~l~~Gs~~pD~d~k--~~~-~f~~Hfydp~~~-~~~~~~~   82 (370)
T 2wxu_A            8 TGTHAMIVTQGVSILENDLSKNEPESVRKNLEILKEN-MHELQLGSTYPDYDKN--AYD-LYQDHFWDPDID-NNFSKDN   82 (370)
T ss_dssp             BSHHHHHHHHHHHHHHHHCCTTSCHHHHHHHHHHHHT-HHHHHHHHHGGGTCTT--CCT-TCGGGCCCTTC---------
T ss_pred             CchHHHHHHHHHHHHhhcCccchhHHHHHHHHHHHHH-HHHHHcCCcccccCCc--ccc-ccccccccCCCC-CCccccc
Confidence            456889998888887322       222222333211 1245666899997322  121 233599875332 2221110


Q ss_pred             Cc-cccCCCCCCcHHHHHHHHHHHhcC-CCCCCccccccHHHHHHHHHHHhccCCCCcccc-C-CCCCCCCcEEeccCCc
Q 022165          101 DC-HDTHGKKNMCIVGAIRNFTSQLLH-YREGSSDRRHNMTEALLFLSHFMGDVHQPMHVG-F-TSDEGGNTIELRWFRH  176 (301)
Q Consensus       101 dc-~~~~~~~~~~~~~aI~~~~~~L~~-~~~s~~~~~~~~~~aLk~LiHlvGDiHQPLH~~-~-~~D~GGN~i~v~~~g~  176 (301)
                      .- .. ... ..........+++.-.+ -+....   ..-.+.|-..+|+|+|+.||+|+. . .-|.+           
T Consensus        83 ~w~~~-~~~-~~tA~~~~~ky~~~A~~~~~~g~~---~~A~~~LG~a~Hy~~D~~~P~Ha~n~t~~~~~-----------  146 (370)
T 2wxu_A           83 SWYLA-YSI-PDTGESQIRKFSALARYEWQRGNY---KQATFYLGEAMHYFGDIDTPYHPANVTAVDSA-----------  146 (370)
T ss_dssp             -CTTT-BCB-CCCHHHHHHHHHHHHHHHHHTTCH---HHHHHHHHHHHHHHHHHTSSTTTTTCCTTTCT-----------
T ss_pred             ccccc-cCC-CCcHHHHHHHHHHHHHHHHHcCCH---HHHHHHHHHHHHHhhcCCCCcccccccccCCc-----------
Confidence            00 00 000 01233334444443222 111111   123577888999999999999995 1 11111           


Q ss_pred             ccCchHHHhHhhHhHHhhccCCccHHHHHHHHHhhcCCCCcccccch-hcccCCCCCChHHHHHHHHHH----HhhhcCC
Q 022165          177 KSNLHHVWDREIILTALADYYDKDTELLLQDIVANFTDGVWHDDVSS-WKDCDNLMKCPNKYATESINM----ACKWGYK  251 (301)
Q Consensus       177 ~~nLH~vWDs~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-w~~~~~~~~~~~~Wa~ES~~l----a~~~vY~  251 (301)
                         -|+-.+.-+.... .. |             .+..++... ... +.. .....++.+|+.|....    |.+.-|+
T Consensus       147 ---gH~~fE~~V~~~~-~~-y-------------~~~t~g~~~-~~~~y~~-~~~~~~~~~Wv~e~ak~~Ak~a~~~Y~~  206 (370)
T 2wxu_A          147 ---GHVKFETFAEERK-EQ-Y-------------KINTAGCKT-NEAFYTD-ILKNKDFNAWSKEYARGFAKTGKSIYYS  206 (370)
T ss_dssp             ---HHHHHHHHHHHHG-GG-G-------------CCSCCSSCT-TSHHHHH-HHHCSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ---CHHHHHHHHHHhh-hh-e-------------eeccCCccc-ccceeec-ccccCCHHHHHHHHHHHHHHHHHHHHHh
Confidence               1888877554321 11 1             111110000 000 000 00125799999998775    5542233


Q ss_pred             CCCCCCCCCHHHHhcHHHHHHHHHHHHHHHHHHHHHHhhC
Q 022165          252 GVTPGETLADDYFNSRMPIVMKRIAQGGIRLAMFLNRIFS  291 (301)
Q Consensus       252 ~~~~~~~ls~~Y~~~~~~~~~~ql~~AG~RLA~~Ln~i~~  291 (301)
                      ... .......|    ..+++.+|..|=..+|.+|..++.
T Consensus       207 ~~~-~~~~~~~~----~~~a~~~L~~AQ~~TAGfl~~f~~  241 (370)
T 2wxu_A          207 HAS-MSHSWDDW----DYAAKVTLANSQKGTAGYIYRFLH  241 (370)
T ss_dssp             TTS-TTSCHHHH----HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hcc-ccCcHHHH----HHHHHHHHHHHHHHHHHHHHHHHH
Confidence            322 11223444    666668888888888888876664

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	301
d1ak0a_	264	a.124.1.2 (A:) P1 nuclease {Penicillium citrinum [	4e-83
d1ah7a_	245	a.124.1.1 (A:) Bacterial phosholipase C {Bacillus	2e-51
d1olpa1	249	a.124.1.1 (A:1-249) Alpha-toxin, N-terminal domain	6e-04
d1ca1a1	249	a.124.1.1 (A:1-249) Alpha-toxin, N-terminal domain	0.001

>d1ak0a_ a.124.1.2 (A:) P1 nuclease {Penicillium citrinum [TaxId: 5077]} Length = 264

class: All alpha proteins
fold: Phospholipase C/P1 nuclease
superfamily: Phospholipase C/P1 nuclease
family: P1 nuclease
domain: P1 nuclease
species: Penicillium citrinum [TaxId: 5077]

 Score =  249 bits (636), Expect = 4e-83
 Identities = 74/274 (27%), Positives = 122/274 (44%), Gaps = 19/274 (6%)

Query: 26  WSKEGHIMTCRIAQSLLEPDAAHAVENLLPQHVNGDLSALCVWPDQVRHWYRYRWTSPLH 85
           W   GH     +AQ  + P+AA   + +L    +  L+++  W D+ R     +W++ LH
Sbjct: 1   WGALGHATVAYVAQHYVSPEAASWAQGILGSSSSSYLASIASWADEYRLTSAGKWSASLH 60

Query: 86  FIDTPD---DACTYEFSRDCHDTHGKKNMCIVGAIRNFTSQLLHYREGSSDRRHNMTEAL 142
           FID  D     C  ++ RDC       + C + AI N+T ++       S    N  EAL
Sbjct: 61  FIDAEDNPPTNCNVDYERDCGS-----SGCSISAIANYTQRVSDS----SLSSENHAEAL 111

Query: 143 LFLSHFMGDVHQPMHVGFTSDEGGNTIELRWFRHKSNLHHVWDREIILTALADYYDKDTE 202
            FL HF+GD+ QP+H       GGN I + +  +  NLH  WD  +    +  +   D E
Sbjct: 112 RFLVHFIGDMTQPLHDEAY-AVGGNKINVTFDGYHDNLHSDWDTYMPQKLIGGHALSDAE 170

Query: 203 LLLQDIVANFTDGVWHDDVSSWKDCDNL---MKCPNKYATESINMACKWGYKG---VTPG 256
              + +V N   G +      W   DN+   +    ++A+++  + C             
Sbjct: 171 SWAKTLVQNIESGNYTAQAIGWIKGDNISEPITTATRWASDANALVCTVVMPHGAAALQT 230

Query: 257 ETLADDYFNSRMPIVMKRIAQGGIRLAMFLNRIF 290
             L   Y++S +  +  +IA+GG RLA ++N I 
Sbjct: 231 GDLYPTYYDSVIDTIELQIAKGGYRLANWINEIH 264

>d1ah7a_ a.124.1.1 (A:) Bacterial phosholipase C {Bacillus cereus [TaxId: 1396]} Length = 245

class: All alpha proteins
fold: Phospholipase C/P1 nuclease
superfamily: Phospholipase C/P1 nuclease
family: Phospholipase C
domain: Bacterial phosholipase C
species: Bacillus cereus [TaxId: 1396]

 Score =  167 bits (424), Expect = 2e-51
 Identities = 34/274 (12%), Positives = 68/274 (24%), Gaps = 38/274 (13%)

Query: 21  PGAWGWSKEGHIMTCRIAQSLLEPDAAHAVENLLP--QHVNGDLSALCVWPDQVRHWYRY 78
                     H+     A  ++  +     ++ +        +L       D    +Y  
Sbjct: 4   EDKHKEGVNSHLWIVNRAIDIMSRNTTLVKQDRVAQLNEWRTELENGIYAADYENPYYD- 62

Query: 79  RWTSPLHFIDTPDDACTYEFSRDCHDTHGKKNMCIVGAIRNFTSQLLHYREGSSDRRHNM 138
             T   HF D  +   TY                     + F      Y+     +    
Sbjct: 63  NSTFASHFYDPDNG-KTYIPFAKQAKET---------GAKYFKLAGESYKNKDMKQA--- 109

Query: 139 TEALLFLSHFMGDVHQPMHVGFTSDEGGNTIELRWFRHKSNLHHVWDREIILTALADYYD 198
              L    H++GDV+QPMH                  +    H  ++  +    + D Y 
Sbjct: 110 FFYLGLSLHYLGDVNQPMHAA----------NFTNLSYPQGFHSKYENFVD--TIKDNYK 157

Query: 199 KDTELLLQDIVANFTDGVWHDDVSSWKDCDNLMKCPNKYATESINMACKWGYKGVTPGET 258
                   +      +          +          +  +  +N   K  +      + 
Sbjct: 158 VTDGNGYWNWKGTNPE----------EWIHGAAVVAKQDYSGIVNDNTKDWFVKAAVSQE 207

Query: 259 LADDYFNSRMPIVMKRIAQGGIRLAMFLNRIFSD 292
            AD +     P+  KR+       A ++   F  
Sbjct: 208 YADKWRAEVTPMTGKRLMDAQRVTAGYIQLWFDT 241

>d1olpa1 a.124.1.1 (A:1-249) Alpha-toxin, N-terminal domain {Clostridium absonum [TaxId: 29369]} Length = 249

class: All alpha proteins
fold: Phospholipase C/P1 nuclease
superfamily: Phospholipase C/P1 nuclease
family: Phospholipase C
domain: Alpha-toxin, N-terminal domain
species: Clostridium absonum [TaxId: 29369]

 Score = 38.5 bits (89), Expect = 6e-04
 Identities = 24/148 (16%), Positives = 49/148 (33%), Gaps = 22/148 (14%)

Query: 24  WGWSKEG---HIMTCRIAQSLLEPDAAHAVENLLPQHVN------GDLSALCVWPDQVRH 74
           W   ++G   H +    A  +L+ D +      +   ++              +PD   +
Sbjct: 1   WDGKEDGTGTHSVIVTQAIEMLKHDLSKDEPEAIRNDLSILEKNLHKFQLGSTFPDYDPN 60

Query: 75  WYRYRWTSPLHFIDTPDDACTYEFSRDCHDTHGKKNMCIVGAIRNFTSQLLHYREGSSDR 134
            Y   +    HF D PD    +      + ++   +       +  T     + +G    
Sbjct: 61  AYS-LYQD--HFWD-PDTDHNFTQDNKWYLSYAVPDNAESQTRKFATLAKNEWDKG---- 112

Query: 135 RHNMTEALLFL---SHFMGDVHQPMHVG 159
             N  +A  +L    H+ GD++ P H  
Sbjct: 113 --NYEKAAWYLGQGMHYFGDLNTPYHAA 138

>d1ca1a1 a.124.1.1 (A:1-249) Alpha-toxin, N-terminal domain {Clostridium perfringens, different strains [TaxId: 1502]} Length = 249

class: All alpha proteins
fold: Phospholipase C/P1 nuclease
superfamily: Phospholipase C/P1 nuclease
family: Phospholipase C
domain: Alpha-toxin, N-terminal domain
species: Clostridium perfringens, different strains [TaxId: 1502]

 Score = 37.7 bits (87), Expect = 0.001
 Identities = 26/148 (17%), Positives = 49/148 (33%), Gaps = 22/148 (14%)

Query: 24  WGWSKEG---HIMTCRIAQSLLEPDAAHAVENLLPQHV------NGDLSALCVWPDQVRH 74
           W    +G   H M      S+LE D +      + +++        +L     +PD  ++
Sbjct: 1   WDGKIDGTGTHAMIVTQGVSILENDLSKNEPESVRKNLEILKENMHELQLGSTYPDYDKN 60

Query: 75  WYRYRWTSPLHFIDTPDDACTYEFSRDCHDTHGKKNMCIVGAIRNFTSQLLHYREGSSDR 134
            Y   +    HF D PD    +      +  +   +       +        ++ G    
Sbjct: 61  AYD-LYQD--HFWD-PDTDNNFSKDNSWYLAYSIPDTGESQIRKFSALARYEWQRG---- 112

Query: 135 RHNMTEALLFL---SHFMGDVHQPMHVG 159
             N  +A  +L    H+ GD+  P H  
Sbjct: 113 --NYKQATFYLGEAMHYFGDIDTPYHPA 138

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	301
d1ak0a_	264	P1 nuclease {Penicillium citrinum [TaxId: 5077]}	100.0
d1ah7a_	245	Bacterial phosholipase C {Bacillus cereus [TaxId:	100.0
d1ca1a1	249	Alpha-toxin, N-terminal domain {Clostridium perfri	96.89
d1olpa1	249	Alpha-toxin, N-terminal domain {Clostridium absonu	96.49

>d1ak0a_ a.124.1.2 (A:) P1 nuclease {Penicillium citrinum [TaxId: 5077]}

class: All alpha proteins
fold: Phospholipase C/P1 nuclease
superfamily: Phospholipase C/P1 nuclease
family: P1 nuclease
domain: P1 nuclease
species: Penicillium citrinum [TaxId: 5077]

Probab=100.00  E-value=1.7e-70  Score=497.25  Aligned_cols=255  Identities=29%  Similarity=0.530  Sum_probs=221.4

Q ss_pred             CChhHHHHHHHHHHhcCCHHHHHHHHhhCCCCCCCCccccCccccccccccCCCCCCCCcccCCCCC---CCCcccCCCc
Q 022165           26 WSKEGHIMTCRIAQSLLEPDAAHAVENLLPQHVNGDLSALCVWPDQVRHWYRYRWTSPLHFIDTPDD---ACTYEFSRDC  102 (301)
Q Consensus        26 Wg~~GH~~Va~IA~~~L~~~~~~~v~~lL~~~~~~~l~~~a~WaD~ir~~~~~~~~~~wHyid~p~~---~~~~~~~~dc  102 (301)
                      ||.+|||+||+||+++|+|+++++|++||+.++..+|+++|+|||+||+++.++++.+|||+|+|.+   .|.+.+.++|
T Consensus         1 Wg~~GH~~Va~iA~~~L~~~~~~~v~~iL~~~~~~~l~~~a~WaD~ir~~~~~~~~~~wHyvn~p~~~~~~~~~~~~~~~   80 (264)
T d1ak0a_           1 WGALGHATVAYVAQHYVSPEAASWAQGILGSSSSSYLASIASWADEYRLTSAGKWSASLHFIDAEDNPPTNCNVDYERDC   80 (264)
T ss_dssp             CCHHHHHHHHHHHHHHSCHHHHHHHHHHHTCCSTTTTGGGTTHHHHHHTSTTTGGGGGGGCCCCCCBTTTBCCCCHHHHS
T ss_pred             CCcHHHHHHHHHHHHhCCHHHHHHHHHHhCCCCCCCceeeeeChHhhcCCCccchhhccccCCCCCCCCccccccccccC
Confidence            9999999999999999999999999999997777889999999999998888899999999999754   4677777889


Q ss_pred             cccCCCCCCcHHHHHHHHHHHhcCCCCCCccccccHHHHHHHHHHHhccCCCCccccCCCCCCCCcEEeccCCcccCchH
Q 022165          103 HDTHGKKNMCIVGAIRNFTSQLLHYREGSSDRRHNMTEALLFLSHFMGDVHQPMHVGFTSDEGGNTIELRWFRHKSNLHH  182 (301)
Q Consensus       103 ~~~~~~~~~~~~~aI~~~~~~L~~~~~s~~~~~~~~~~aLk~LiHlvGDiHQPLH~~~~~D~GGN~i~v~~~g~~~nLH~  182 (301)
                      +.     ++|+++||++++++|++.+.+.    +++++|||||||||||||||||++ ..|+|||+|+|.|+|+++|||+
T Consensus        81 ~~-----~~~i~~ai~~~~~~l~~~~~s~----~~~~~aL~~LvHlvGDiHQPLH~~-~~D~GGN~i~V~~~g~~~NLH~  150 (264)
T d1ak0a_          81 GS-----SGCSISAIANYTQRVSDSSLSS----ENHAEALRFLVHFIGDMTQPLHDE-AYAVGGNKINVTFDGYHDNLHS  150 (264)
T ss_dssp             CT-----TCCHHHHHHHHHHHHTCTTSCH----HHHHHHHHHHHHHHHHTTSGGGGC-CHHHHTTTCEEEETTEEEEHHH
T ss_pred             CC-----CccHHHHHHHHHHHHhcCCCCh----HHHHHHHHHHHHHHhhcccccccc-CcCCCCCeeEEEECCccCcHHH
Confidence            75     8999999999999999876553    478999999999999999999987 7899999999999999999999


Q ss_pred             HHhHhhHhHHhhccCCccHHHHHHHHHhhcCCCCcccccchhcccC---CCCCChHHHHHHHHHHHhhhcCCCCC---CC
Q 022165          183 VWDREIILTALADYYDKDTELLLQDIVANFTDGVWHDDVSSWKDCD---NLMKCPNKYATESINMACKWGYKGVT---PG  256 (301)
Q Consensus       183 vWDs~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~w~~~~---~~~~~~~~Wa~ES~~la~~~vY~~~~---~~  256 (301)
                      |||++|+++............+++.|.+++....+.++...|..+.   .+..||.+|+.||++++|+++|+...   .+
T Consensus       151 vWDs~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wa~Es~~la~~~~y~~~~~~~~~  230 (264)
T d1ak0a_         151 DWDTYMPQKLIGGHALSDAESWAKTLVQNIESGNYTAQAIGWIKGDNISEPITTATRWASDANALVCTVVMPHGAAALQT  230 (264)
T ss_dssp             HHHTHHHHHHHSCCSHHHHHHHHHHHHHHHHHSTTHHHHHHHHTTCCTTCHHHHHHHHHHHHHHHHHHTTSTTCSGGGSS
T ss_pred             HHhhhHHhhhccccccchHHHHHHHHHHhccccccHHHhhhhhccccccccccCHHHHHHHHHHHHHHHhhccccccccC
Confidence            9999999887665544445667788877766544555666675543   23358999999999999999997643   45


Q ss_pred             CCCCHHHHhcHHHHHHHHHHHHHHHHHHHHHHhh
Q 022165          257 ETLADDYFNSRMPIVMKRIAQGGIRLAMFLNRIF  290 (301)
Q Consensus       257 ~~ls~~Y~~~~~~~~~~ql~~AG~RLA~~Ln~i~  290 (301)
                      .+|+++|++++++++++||++||+|||.+||+||
T Consensus       231 ~~l~~~Y~~~~~~i~~~ql~~AG~RLA~~LN~if  264 (264)
T d1ak0a_         231 GDLYPTYYDSVIDTIELQIAKGGYRLANWINEIH  264 (264)
T ss_dssp             SBCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            5799999999999999999999999999999997

>d1ah7a_ a.124.1.1 (A:) Bacterial phosholipase C {Bacillus cereus [TaxId: 1396]}

class: All alpha proteins
fold: Phospholipase C/P1 nuclease
superfamily: Phospholipase C/P1 nuclease
family: Phospholipase C
domain: Bacterial phosholipase C
species: Bacillus cereus [TaxId: 1396]

Probab=100.00  E-value=2.9e-40  Score=294.93  Aligned_cols=234  Identities=14%  Similarity=0.125  Sum_probs=167.6

Q ss_pred             ccccCChhHHHHHHHHHHhcCCHHHH---HHHHhhCCCCCCCCccccCccccccccccCCCCCCCCcccCCCCCCCCccc
Q 022165           22 GAWGWSKEGHIMTCRIAQSLLEPDAA---HAVENLLPQHVNGDLSALCVWPDQVRHWYRYRWTSPLHFIDTPDDACTYEF   98 (301)
Q Consensus        22 ~a~AWg~~GH~~Va~IA~~~L~~~~~---~~v~~lL~~~~~~~l~~~a~WaD~ir~~~~~~~~~~wHyid~p~~~~~~~~   98 (301)
                      ...+||..||+.|+.+|.+.|++++.   +.+-++|... ..+|.+.++|||+++... ..++.+|||+|+|.+ |++..
T Consensus         5 ~~~~~g~~tH~~I~~~A~~~L~~d~~~~~~~~~~~l~~y-~~~l~~g~~waD~~~~~~-~~~~~~~Hf~~~~~~-~~~~~   81 (245)
T d1ah7a_           5 DKHKEGVNSHLWIVNRAIDIMSRNTTLVKQDRVAQLNEW-RTELENGIYAADYENPYY-DNSTFASHFYDPDNG-KTYIP   81 (245)
T ss_dssp             SSSCGGGCHHHHHHHHHHHHHHHCCSSCCHHHHHHHHHT-HHHHHHHHHHTTTSTTTT-TTTTCGGGCCBTTTT-BCSST
T ss_pred             CCCCCCCcHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHH-HHHHHhcCcCcccccccc-ccccCCceeeeCCCC-CCcCC
Confidence            45699999999999999999987753   3333444321 347999999999998522 247899999996654 55554


Q ss_pred             CCCccccCCCCCCcHHHHHHHHHHHhcCCCCCCccccccHHHHHHHHHHHhccCCCCccccCCCCCCCCcEEeccCCccc
Q 022165           99 SRDCHDTHGKKNMCIVGAIRNFTSQLLHYREGSSDRRHNMTEALLFLSHFMGDVHQPMHVGFTSDEGGNTIELRWFRHKS  178 (301)
Q Consensus        99 ~~dc~~~~~~~~~~~~~aI~~~~~~L~~~~~s~~~~~~~~~~aLk~LiHlvGDiHQPLH~~~~~D~GGN~i~v~~~g~~~  178 (301)
                      ..+|.      .++++.++....+.+++.+.+      ...++|++++|||||||||||++          +|.++|..+
T Consensus        82 ~~~~~------~~~~~~~~~~~~~~~~~~~~~------~~~~~l~~~~h~~~d~~qP~H~~----------~v~~~~~~~  139 (245)
T d1ah7a_          82 FAKQA------KETGAKYFKLAGESYKNKDMK------QAFFYLGLSLHYLGDVNQPMHAA----------NFTNLSYPQ  139 (245)
T ss_dssp             TCCCH------HHHHHHHHHHHHHHHHTTCHH------HHHHHHHHHHHHHHHHTSTTTTT----------TCCTTSSST
T ss_pred             CCCCh------HHHHHHHHHHHHHHHhcCCHH------HHHHHHHHHHHHHhhcCCCcccc----------ccccCCCCC
Confidence            44432      456777777777778774322      45789999999999999999997          266788999


Q ss_pred             CchHHHhHhhHhHHhhccCCccHHHHHHHHHhhcCCCCcccccchhcccCCCCCChHHHHHHHHHHHhhhcCCCCCCCCC
Q 022165          179 NLHHVWDREIILTALADYYDKDTELLLQDIVANFTDGVWHDDVSSWKDCDNLMKCPNKYATESINMACKWGYKGVTPGET  258 (301)
Q Consensus       179 nLH~vWDs~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~w~~~~~~~~~~~~Wa~ES~~la~~~vY~~~~~~~~  258 (301)
                      |||++||+.+++....  +.....    .....+.    .....+|... ....++..|+.||+.+++. +|...+.+..
T Consensus       140 NLH~~WDs~i~~~~~~--~~~~~~----~~~~~~~----~~~~~~~i~~-~~~~~~~~w~~es~~~~~~-~Y~~~~~~~~  207 (245)
T d1ah7a_         140 GFHSKYENFVDTIKDN--YKVTDG----NGYWNWK----GTNPEEWIHG-AAVVAKQDYSGIVNDNTKD-WFVKAAVSQE  207 (245)
T ss_dssp             THHHHHHHHHHHHGGG--GCCCSS----CCCTTCS----CSCHHHHHHH-HHHHHHHTGGGTSSHHHHH-HHHHHTTCHH
T ss_pred             CcHHHHHhhHHHhhhh--hhhhHH----HHHHHHh----ccCHHHHHHH-HhhcCHHHHHHHHHHHHHH-HhccCCCCCC
Confidence            9999999999865321  110000    0000010    0112233110 1123678899999998877 6877777778


Q ss_pred             CCHHHHhcHHHHHHHHHHHHHHHHHHHHHHhhCC
Q 022165          259 LADDYFNSRMPIVMKRIAQGGIRLAMFLNRIFSD  292 (301)
Q Consensus       259 ls~~Y~~~~~~~~~~ql~~AG~RLA~~Ln~i~~~  292 (301)
                      ++++|..+.+|++++||.+||+|||.+||.+|+.
T Consensus       208 l~~~Y~~~~~~~v~~rL~~ag~rlAg~Ln~~Fd~  241 (245)
T d1ah7a_         208 YADKWRAEVTPMTGKRLMDAQRVTAGYIQLWFDT  241 (245)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999863

>d1ca1a1 a.124.1.1 (A:1-249) Alpha-toxin, N-terminal domain {Clostridium perfringens, different strains [TaxId: 1502]}

class: All alpha proteins
fold: Phospholipase C/P1 nuclease
superfamily: Phospholipase C/P1 nuclease
family: Phospholipase C
domain: Alpha-toxin, N-terminal domain
species: Clostridium perfringens, different strains [TaxId: 1502]

Probab=96.89  E-value=0.0032  Score=53.63  Aligned_cols=221  Identities=17%  Similarity=0.119  Sum_probs=104.3

Q ss_pred             hhHHHHHHHHHHhcCCHH-------HHHHHHhhCCCCCCCCccccCccccccccccCCCCCCCCcccCCCCCCCCcccCC
Q 022165           28 KEGHIMTCRIAQSLLEPD-------AAHAVENLLPQHVNGDLSALCVWPDQVRHWYRYRWTSPLHFIDTPDDACTYEFSR  100 (301)
Q Consensus        28 ~~GH~~Va~IA~~~L~~~-------~~~~v~~lL~~~~~~~l~~~a~WaD~ir~~~~~~~~~~wHyid~p~~~~~~~~~~  100 (301)
                      ..-|..|+.=|.+.|...       ..+.-.++|... -..|..=+.|||.-..  .|+ +-..||.|...+ .++....
T Consensus         8 ~~TH~~i~~qA~~iL~nD~~~~~~~~~~~~~~~L~~y-~~~~~~G~~~~D~~~~--~y~-~f~~HFy~p~~~-k~~~g~~   82 (249)
T d1ca1a1           8 TGTHAMIVTQGVSILENDLSKNEPESVRKNLEILKEN-MHELQLGSTYPDYDKN--AYD-LYQDHFWDPDTD-NNFSKDN   82 (249)
T ss_dssp             BSHHHHHHHHHHHHHHHHCCTTSCHHHHHHHHHHHHT-HHHHHHHHHGGGTCTT--CCT-TCGGGCCCTTTC-SSTTTCS
T ss_pred             CchHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHH-HHHHhcCCcCcccCCc--cCc-ccccccccCCCC-CCccCcc
Confidence            346999999898886433       122212222211 1245566889996542  333 456799985332 2222110


Q ss_pred             CccccCCCCCCcHHHHHHHHHHHhc-CCCCCCccccccHHHHHHHHHHHhccCCCCccccCCCCCCCCcEEeccCCcccC
Q 022165          101 DCHDTHGKKNMCIVGAIRNFTSQLL-HYREGSSDRRHNMTEALLFLSHFMGDVHQPMHVGFTSDEGGNTIELRWFRHKSN  179 (301)
Q Consensus       101 dc~~~~~~~~~~~~~aI~~~~~~L~-~~~~s~~~~~~~~~~aLk~LiHlvGDiHQPLH~~~~~D~GGN~i~v~~~g~~~n  179 (301)
                      .-.-..+. ..........+...-. .......   ..--+.|-...|+|+|+.||+|++       |...     ...+
T Consensus        83 ~~~~~~~~-~~~a~~~~~ky~~~A~~~~~~~~~---~~a~~~LG~a~Hy~~D~~~P~Ha~-------N~t~-----~~~~  146 (249)
T d1ca1a1          83 SWYLAYSI-PDTGESQIRKFSALARYEWQRGNY---KQATFYLGEAMHYFGDIDTPYHPA-------NVTA-----VDSA  146 (249)
T ss_dssp             CCCCSSCC-CCCHHHHHHHHHHHHHHHHHTTCH---HHHHHHHHHHHHHHHHHTSSTTTT-------TCCT-----TTCT
T ss_pred             cccccccc-cchHHHHHHHHHHHHHHHHHcccH---HHHHHHHHHHHHHHhcCCCccccc-------cccc-----cCcc
Confidence            00000011 1234444444443322 2111111   122477888999999999999986       1111     1124


Q ss_pred             chHHHhHhhHhHHhhccCCccHHHHHHHHHhhcCCCCcccccchhc-ccCCCCCChHHHHHHHHHH----HhhhcCCCCC
Q 022165          180 LHHVWDREIILTALADYYDKDTELLLQDIVANFTDGVWHDDVSSWK-DCDNLMKCPNKYATESINM----ACKWGYKGVT  254 (301)
Q Consensus       180 LH~vWDs~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~w~-~~~~~~~~~~~Wa~ES~~l----a~~~vY~~~~  254 (301)
                      -|+..++-+-..  ...+.             +...+  .....+. .......++..|..|....    +.+.-|+. .
T Consensus       147 ~H~~yEn~V~~~--~d~yk-------------v~~~g--~~~~~~~~~d~~~~~~~~~w~~dy~r~~a~~a~~~y~~~-~  208 (249)
T d1ca1a1         147 GHVKFETFAEER--KEQYK-------------INTVG--CKTNEDFYADILKNKDFNAWSKEYARGFAKTGKSIYYSH-A  208 (249)
T ss_dssp             HHHHHHHHHHHH--GGGGC-------------CSCCS--SCTTSHHHHHHHHCSCHHHHHHHHHHHHHHHHHHHHHHT-T
T ss_pred             cHHHHHHHHHhc--chhhe-------------ecccc--cccCcccccccccchhHHHHHHHHHHHHHHHhHHHHhhc-c
Confidence            588888754321  11110             00000  0000000 0000113666777765543    22211221 1


Q ss_pred             CCCCCCHHHHhcHHHHHHHHHHHHHHHHHHHHHHhhC
Q 022165          255 PGETLADDYFNSRMPIVMKRIAQGGIRLAMFLNRIFS  291 (301)
Q Consensus       255 ~~~~ls~~Y~~~~~~~~~~ql~~AG~RLA~~Ln~i~~  291 (301)
                      ....-    ..+..+++..+|..|-.=+|..|-.++.
T Consensus       209 ~~~~~----~~~~~~~t~~~L~~AQr~TAGfl~~f~~  241 (249)
T d1ca1a1         209 SMSHS----WDDWDYAAKVTLANSQKGTAGYIYRFLH  241 (249)
T ss_dssp             STTSC----HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccc----HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            11111    2334578888888888888888777664

>d1olpa1 a.124.1.1 (A:1-249) Alpha-toxin, N-terminal domain {Clostridium absonum [TaxId: 29369]}

class: All alpha proteins
fold: Phospholipase C/P1 nuclease
superfamily: Phospholipase C/P1 nuclease
family: Phospholipase C
domain: Alpha-toxin, N-terminal domain
species: Clostridium absonum [TaxId: 29369]

Probab=96.49  E-value=0.0022  Score=54.62  Aligned_cols=221  Identities=14%  Similarity=0.107  Sum_probs=106.4

Q ss_pred             ChhHHHHHHHHHHhcCCH-------HHHHHHHhhCCCCCCCCccccCccccccccccCCCCCCCCcccCCCCCCCCcccC
Q 022165           27 SKEGHIMTCRIAQSLLEP-------DAAHAVENLLPQHVNGDLSALCVWPDQVRHWYRYRWTSPLHFIDTPDDACTYEFS   99 (301)
Q Consensus        27 g~~GH~~Va~IA~~~L~~-------~~~~~v~~lL~~~~~~~l~~~a~WaD~ir~~~~~~~~~~wHyid~p~~~~~~~~~   99 (301)
                      |..-|.-|+.=|...|..       +..+.-.++|... ...|..=++|||.=.  +-|. +-.-||.|...+ .++.-.
T Consensus         7 g~~TH~~I~~qAi~IL~nd~~~~~~~~~~~~~~~l~~~-~~~~~~G~~~aD~d~--~~y~-~f~~HFy~pdtg-k~~~g~   81 (249)
T d1olpa1           7 GTGTHSVIVTQAIEMLKHDLSKDEPEAIRNDLSILEKN-LHKFQLGSTFPDYDP--NAYS-LYQDHFWDPDTD-HNFTQD   81 (249)
T ss_dssp             TBSHHHHHHHHHHHHHHHHCCTTSCHHHHHHHHHHHHT-HHHHHHHHHGGGGCT--TCCT-TCGGGCCBTTTT-BCHHHH
T ss_pred             CcchHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHh-HHHHhcCCcCccCCC--cccc-ccccccccCCCC-CCCcCC
Confidence            345699999988888832       2222111222211 113455668999522  1221 234599885332 222100


Q ss_pred             CCccccCCCCCCcHHHHHHHHHHHhcCC-CCCCccccccHHHHHHHHHHHhccCCCCccccCCCCCCCCcEEeccCCccc
Q 022165          100 RDCHDTHGKKNMCIVGAIRNFTSQLLHY-REGSSDRRHNMTEALLFLSHFMGDVHQPMHVGFTSDEGGNTIELRWFRHKS  178 (301)
Q Consensus       100 ~dc~~~~~~~~~~~~~aI~~~~~~L~~~-~~s~~~~~~~~~~aLk~LiHlvGDiHQPLH~~~~~D~GGN~i~v~~~g~~~  178 (301)
                      .+--..... ..........+.+.-.+. +....   ..--+.|-...|+++|+.||+|++       |...|     ..
T Consensus        82 ~~~~~~~~~-~~~A~~~~~ky~~~A~~~~~~g~~---~~a~~~LG~a~Hy~~D~~qP~Haa-------N~t~v-----~~  145 (249)
T d1olpa1          82 NKWYLSYAV-PDNAESQTRKFATLAKNEWDKGNY---EKAAWYLGQGMHYFGDLNTPYHAA-------NVTAV-----DS  145 (249)
T ss_dssp             SGGGGGGCC-SCCHHHHHHHHHHHHHHHHHHTCH---HHHHHHHHHHHHHHHHHTSHHHHT-------TCCTT-----TC
T ss_pred             ccccccccC-CccHHHHHHHHHHHHHHHHHccCH---HHHHHHHHhHhHHhhcCCCCcccc-------ccccc-----cc
Confidence            000000000 123443333443332221 11111   122477888999999999999985       22211     12


Q ss_pred             CchHHHhHhhHhHHhhccCCccHHHHHHHHHhhcCC--CCcccccchhcccCCCCCChHHHHHHHHHHHhhh----cCCC
Q 022165          179 NLHHVWDREIILTALADYYDKDTELLLQDIVANFTD--GVWHDDVSSWKDCDNLMKCPNKYATESINMACKW----GYKG  252 (301)
Q Consensus       179 nLH~vWDs~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~w~~~~~~~~~~~~Wa~ES~~la~~~----vY~~  252 (301)
                      +.|+..++-+-..                 ..++..  .++...... ....-...+|.+|..|....+...    .|+.
T Consensus       146 ~~H~~yE~yV~~~-----------------~~~Y~v~~~g~~~~~~~-~~~~~~~~~~~ewi~e~a~~~a~~a~~iy~~~  207 (249)
T d1olpa1         146 PGHVKFETYAEER-----------------KDTYRLDTTGYNTDDAF-YKDTLKNDNFNEWSKGYCKYWAKKAKNLYYSH  207 (249)
T ss_dssp             HHHHHHHHHHHHH-----------------GGGGCCSCCSSCTTSHH-HHGGGSCSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHhh-----------------hhhheeccccccccccc-ccccccCCCHHHHHHHHHHHHHHHHHHHHHHh
Confidence            3588887654321                 111111  000000000 000012357888888776665442    2322


Q ss_pred             CCCCCCCCHHHHhcHHHHHHHHHHHHHHHHHHHHHHhhC
Q 022165          253 VTPGETLADDYFNSRMPIVMKRIAQGGIRLAMFLNRIFS  291 (301)
Q Consensus       253 ~~~~~~ls~~Y~~~~~~~~~~ql~~AG~RLA~~Ln~i~~  291 (301)
                      .. ....    ..+...++.++|..|-.=.|..|..+|+
T Consensus       208 ~~-~~~~----~~~~~~~~~~~L~~Aq~~TAGfi~~f~~  241 (249)
T d1olpa1         208 AT-MSNS----WDDWEYAASHGVGNAQKGVAGYLYRFLN  241 (249)
T ss_dssp             CS-TTSC----HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cc-cccc----HHHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence            11 1111    2446688888999998889988888775