Citrus Sinensis ID: 022166

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-
MSGASSSLRAAFSHCVQQVRNYDYHHYLCLLELPPELRKTAFALRAFNVETSKAMDIASDPRIGLMRLVWWKEAIDKIYVRKQIEHPVAQALASVLSENKISKGWLKRSVEARINDANREISDIPEKIEDLEKYAEDTVSTLLYTTLQAGGIKSAAADHAASHIGKASGLLLLLKSLPYHASRNRHFSYIPAEVAANHGLLVKEGGRSEIHLDSREGLCDAVFEMASVANVHLLKARELSGAVPIEARPVLLESVPAQVLLDSLNRVQFDVFDPRLARGVLGVSPLWYHVKLKWYSWRGKY
cccccccHHHHHHHHHHHHHHcccHHHHHHHcccHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHcccHHccccccccccHHHHHHccccHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHcccccccHHHHcccccccHHHHHHHHHHHHHHccc
********RAAFSHCVQQVRNYDYHHYLCLLELPPELRKTAFALRAFNVETSKAMDIASDPRIGLMRLVWWKEAIDKIYVRKQIEHPVAQALASVLSENKISKGWLKRSVEARINDANREISDIPEKIEDLEKYAEDTVSTLLYTTLQAGGIKSAAADHAASHIGKASGLLLLLKSLPYHASRNRHFSYIPAEVAANHGLLVKEGGRSEIHLDSREGLCDAVFEMASVANVHLLKARELSGAVPIEARPVLLESVPAQVLLDSLNRVQFDVFDPRLARGVLGVSPLWYHVKLKWYSWRGKY
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MSGASSSLRAAFSHCVQQVRNYDYHHYLCLLELPPELRKTAFALRAFNVETSKAMDIASDPRIGLMRLVWWKEAIDKIYVRKQIEHPVAQALASVLSENKISKGWLKRSVEARINDANREISDIPEKIEDLEKYAEDTVSTLLYTTLQAGGIKSAAADHAASHIGKASGLLLLLKSLPYHASRNRHFSYIPAEVAANHGLLVKEGGRSEIHLDSREGLCDAVFEMASVANVHLLKARELSGAVPIEARPVLLESVPAQVLLDSLNRVQFDVFDPRLARGVLGVSPLWYHVKLKWYSWRGKY

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 Required for the function of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I).probableA7YVD7
NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 Required for the function of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I).probableA2AIL4
NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 Involved in the assembly of mitochondrial NADH:ubiquinone oxidoreductase complex (complex I) at early stages. May play a role in the biogenesis of MT-ND1 (By similarity).probableD3ZN43

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3VJ8, chain A
Confidence level:very confident
Coverage over the Query: 7-300
View the alignment between query and template
View the model in PyMOL