Citrus Sinensis ID: 022181

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-
MNYLIGAFKPACNISITFADGKNRKQVPLKKENGQTIMVPLFQSQENISGKISIEPVLGKKVEHNGVKIELLGQIEMYFDRGNFYDFTSLVRELDVPGEIYERKTYPFEFSTVEMPYETYNGVNVRLRYVLKVTVSRGYGGSVVEYQDFVVRNYTPPPSINNSIKMEVGIEDCLHIEFEYNKSKYHLKDVIIGKIYFLLVRIKIKNMDLEIRRRESTGSGANTHVETETLAKFELMDGAPVRGESIPIRLFLSPYELTPTHRNINNKFSVKYYLNLVLVDEEDRRYFKQQEITIYRLQENS
ccccccccccccEEEEEEccccccCEEEEEcccccEEEEEEEccccEEEEEEEEEEccccEEEEEEEEEEEEEEEEEEEccccEEEEEEEEEEEccccCCccccCEEEECccccccCEEEECcEEEEEEEEEEEEEccccccccEEEEEEEEEccccccccccccEEcccccEEEEEEEECccCEEccccEEEEEEEEEEEEEEEEEEEEEEEEEECcccccCEEEEEEEEEEEEECccccccCEEEEEEEccccccccccccccccEEEEEEEEEEEEEccccEEEEEEEEEEEEEcccc
*NYLIGAFKPACNISITFADGKNRKQV*****NGQTIMVPLFQSQENISGKISIEPVLGKKVEHNGVKIELLGQIEMYFDRGNFYDFTSLVRELDVPGEIYERKTYPFEFSTVEMPYETYNGVNVRLRYVLKVTVSRGYGGSVVEYQDFVVRNYTPPPSINNSIKMEVGIEDCLHIEFEYNKSKYHLKDVIIGKIYFLLVRIKIKNMDLEIRRRESTGSGANTHVETETLAKFELMDGAPVRGESIPIRLFLSPYELTPTHRNINNKFSVKYYLNLVLVDEEDRRYFKQQEITIYRLQ***
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MNYLIGAFKPACNISITFADGKNRKQVPLKKENGQTIMVPLFQSQENISGKISIEPVLGKKVEHNGVKIELLGQIEMYFDRGNFYDFTSLVRELDVPGEIYERKTYPFEFSTVEMPYETYNGVNVRLRYVLKVTVSRGYGGSVVEYQDFVVRNYTPPPSINNSIKMEVGIEDCLHIEFEYNKSKYHLKDVIIGKIYFLLVRIKIKNMDLEIRRRESTGSGANTHVETETLAKFELMDGAPVRGESIPIRLFLSPYELTPTHRNINNKFSVKYYLNLVLVDEEDRRYFKQQEITIYRLQENS

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Vacuolar protein sorting-associated protein 26A Plays a role in vesicular protein sorting. Component of the membrane-associated retromer complex which is essential in endosome-to-Golgi retrograde transport. The VPS29-VPS26-VPS35 subcomplex may be involved in recycling of specific cargos from endosome to the plasma membrane.confidentQ9FJD0
Vacuolar protein sorting-associated protein 26A Essential component of the retromer complex, a complex required to retrieve lysosomal enzyme receptors (IGF2R and M6PR) from endosomes to the trans-Golgi network. Also required to regulate transcytosis of the polymeric immunoglobulin receptor (pIgR-pIgA).probableP40336
Vacuolar protein sorting-associated protein 26A Essential component of the retromer complex, a complex required to retrieve lysosomal enzyme receptors (IGF2R and M6PR) from endosomes to the trans-Golgi network. Also required to regulate transcytosis of the polymeric immunoglobulin receptor (pIgR-pIgA).probableO75436

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2FAU, chain A
Confidence level:very confident
Coverage over the Query: 7-299
View the alignment between query and template
View the model in PyMOL