Citrus Sinensis ID: 022236
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 300 | ||||||
| 255574494 | 305 | Phosphatidylinositol N-acetylglucosaminy | 0.99 | 0.973 | 0.811 | 1e-132 | |
| 224137792 | 301 | predicted protein [Populus trichocarpa] | 0.986 | 0.983 | 0.817 | 1e-132 | |
| 224071041 | 301 | predicted protein [Populus trichocarpa] | 0.966 | 0.963 | 0.824 | 1e-132 | |
| 356543544 | 303 | PREDICTED: putative phosphatidylinositol | 0.99 | 0.980 | 0.838 | 1e-131 | |
| 449465417 | 303 | PREDICTED: putative phosphatidylinositol | 0.993 | 0.983 | 0.768 | 1e-130 | |
| 225423611 | 303 | PREDICTED: putative phosphatidylinositol | 0.993 | 0.983 | 0.825 | 1e-123 | |
| 357461997 | 304 | Phosphatidylinositol N-acetylglucosaminy | 0.99 | 0.976 | 0.814 | 1e-121 | |
| 125540343 | 296 | hypothetical protein OsI_08120 [Oryza sa | 0.966 | 0.979 | 0.755 | 1e-120 | |
| 115447373 | 296 | Os02g0622200 [Oryza sativa Japonica Grou | 0.966 | 0.979 | 0.751 | 1e-120 | |
| 226491096 | 302 | uncharacterized protein LOC100273079 [Ze | 0.966 | 0.960 | 0.751 | 1e-118 |
| >gi|255574494|ref|XP_002528159.1| Phosphatidylinositol N-acetylglucosaminyltransferase subunit C, putative [Ricinus communis] gi|223532457|gb|EEF34250.1| Phosphatidylinositol N-acetylglucosaminyltransferase subunit C, putative [Ricinus communis] | Back alignment and taxonomy information |
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Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 241/297 (81%), Positives = 271/297 (91%)
Query: 4 NSSSPNPPRWRKVAYGGMQPGFEDNHTDESFLEQMVMNASVVKRDILKVMQDSVSISQYL 63
SSSP+ P+WRKVAYGGMQPGF+DNHTD+SFLE MVMNASVVKRD+LKVMQDSVSISQYL
Sbjct: 9 ESSSPSRPKWRKVAYGGMQPGFDDNHTDDSFLEDMVMNASVVKRDLLKVMQDSVSISQYL 68
Query: 64 CIVALVVLVWAYTLRSSLDENSLLLLDVSLLGTGFLILVLTEGMLSLNLLFHYILNISFF 123
CIVALV LVW YTL+S L E SL LLD SLLG+GF++L+LT+ MLS+N+LFHYILN+SFF
Sbjct: 69 CIVALVGLVWTYTLQSVLSETSLFLLDASLLGSGFIVLLLTKEMLSVNILFHYILNVSFF 128
Query: 124 ITGLYVLAPIYQTLTRSISSDSIWALTISLLVLHLFLHDYSGSTIKAPGALQNPTLTSCI 183
TGLY+LAP+YQTLTRSISSDSIWA+ SL++LHLFLHDYSGSTI+A GAL+NP L SC+
Sbjct: 129 TTGLYMLAPLYQTLTRSISSDSIWAVAASLIILHLFLHDYSGSTIRASGALKNPNLISCV 188
Query: 184 SLNASVVASVFIASRLPSRLHVFAIMLFSLLVFLFAPLVTYCVKKYSFRLHLLFSVALMI 243
SLNAS+VASVFIASRLPSRLHVFAIMLFSL VFLFAP VTYC+KKYS LHLLFS+ LM
Sbjct: 189 SLNASIVASVFIASRLPSRLHVFAIMLFSLQVFLFAPFVTYCIKKYSLCLHLLFSIGLMA 248
Query: 244 VTLAFVHMLHQLLFVLFLGLLVFVNVVCPYWLIRIQEYKFEINGPWDEAKLCFDITD 300
TLA V+MLH+LLFVLFL LLVFV+VVCPYWLI+IQEYKFEI+GPWDEAKLCFDITD
Sbjct: 249 ATLASVYMLHRLLFVLFLCLLVFVSVVCPYWLIKIQEYKFEIHGPWDEAKLCFDITD 305
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Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224137792|ref|XP_002326441.1| predicted protein [Populus trichocarpa] gi|222833763|gb|EEE72240.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|224071041|ref|XP_002303342.1| predicted protein [Populus trichocarpa] gi|222840774|gb|EEE78321.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|356543544|ref|XP_003540220.1| PREDICTED: putative phosphatidylinositol N-acetylglucosaminyltransferase subunit C-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|449465417|ref|XP_004150424.1| PREDICTED: putative phosphatidylinositol N-acetylglucosaminyltransferase subunit C-like [Cucumis sativus] gi|449516918|ref|XP_004165493.1| PREDICTED: putative phosphatidylinositol N-acetylglucosaminyltransferase subunit C-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|225423611|ref|XP_002274383.1| PREDICTED: putative phosphatidylinositol N-acetylglucosaminyltransferase subunit C [Vitis vinifera] gi|147860031|emb|CAN83130.1| hypothetical protein VITISV_029538 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|357461997|ref|XP_003601280.1| Phosphatidylinositol N-acetylglucosaminyltransferase subunit C [Medicago truncatula] gi|355490328|gb|AES71531.1| Phosphatidylinositol N-acetylglucosaminyltransferase subunit C [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|125540343|gb|EAY86738.1| hypothetical protein OsI_08120 [Oryza sativa Indica Group] | Back alignment and taxonomy information |
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| >gi|115447373|ref|NP_001047466.1| Os02g0622200 [Oryza sativa Japonica Group] gi|47847775|dbj|BAD21552.1| putative phosphatidylinositol glycan, class C; phosphatidylinositol-glycan biosynthesis, class C protein [Oryza sativa Japonica Group] gi|113536997|dbj|BAF09380.1| Os02g0622200 [Oryza sativa Japonica Group] gi|125582925|gb|EAZ23856.1| hypothetical protein OsJ_07572 [Oryza sativa Japonica Group] | Back alignment and taxonomy information |
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| >gi|226491096|ref|NP_001141000.1| uncharacterized protein LOC100273079 [Zea mays] gi|194702112|gb|ACF85140.1| unknown [Zea mays] gi|413923104|gb|AFW63036.1| hypothetical protein ZEAMMB73_738454 [Zea mays] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 300 | ||||||
| TAIR|locus:2044727 | 303 | SETH1 [Arabidopsis thaliana (t | 1.0 | 0.990 | 0.689 | 4.4e-107 | |
| DICTYBASE|DDB_G0286221 | 345 | pigC "phosphatidylinositol gly | 0.946 | 0.823 | 0.321 | 3.7e-39 | |
| MGI|MGI:1914542 | 297 | Pigc "phosphatidylinositol gly | 0.923 | 0.932 | 0.291 | 1.3e-29 | |
| RGD|1311337 | 297 | Pigc "phosphatidylinositol gly | 0.923 | 0.932 | 0.291 | 1.3e-29 | |
| ASPGD|ASPL0000075757 | 505 | AN11232 [Emericella nidulans ( | 0.53 | 0.314 | 0.362 | 3e-29 | |
| UNIPROTKB|Q3ZBX1 | 297 | PIGC "Phosphatidylinositol N-a | 0.923 | 0.932 | 0.291 | 9.1e-29 | |
| UNIPROTKB|Q92535 | 297 | PIGC "Phosphatidylinositol N-a | 0.923 | 0.932 | 0.287 | 9.1e-29 | |
| UNIPROTKB|E2REG5 | 297 | PIGC "Uncharacterized protein" | 0.923 | 0.932 | 0.287 | 3.9e-28 | |
| UNIPROTKB|D0G788 | 297 | PIGC "Uncharacterized protein" | 0.923 | 0.932 | 0.287 | 5e-28 | |
| POMBASE|SPCC550.04c | 324 | gpi2 "pig-C (predicted)" [Schi | 0.91 | 0.842 | 0.273 | 4e-26 |
| TAIR|locus:2044727 SETH1 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 1059 (377.8 bits), Expect = 4.4e-107, P = 4.4e-107
Identities = 209/303 (68%), Positives = 241/303 (79%)
Query: 1 MEDNSSSPN-P-PRWRKVAYGGMQPGFEDNHTDESFLEQMVMNASVVKRDILKVMQDSVS 58
ME N + + P P+WRKVAYGGMQ G++DN+TDESFLE+MVMNA+VV+RD+LKVM+DSVS
Sbjct: 1 MESNLAGDSIPGPKWRKVAYGGMQIGYDDNYTDESFLEEMVMNANVVRRDLLKVMKDSVS 60
Query: 59 ISQYLCIVALVVLVWAYTXXXXXXXXXXXXXXXXXXGTGFLILVLTEG-MLSLNLLFHYI 117
ISQYLCIVALVVLVW +T +GFLIL+LTE MLSL+LL Y+
Sbjct: 61 ISQYLCIVALVVLVWVHTLESSLDENSLLLLDLSLLASGFLILLLTEEKMLSLSLLLRYL 120
Query: 118 LNISFFITGLYVLAPIYQTLTRSISSDSIWALTISLLVLHLFLHDYSGSTIKAPGALQNP 177
+NISFF TGLY+LAPIYQTLTRSISSDSIWA+T+SLL+LHLFLHDYSGSTI+APGAL+ P
Sbjct: 121 VNISFFTTGLYILAPIYQTLTRSISSDSIWAVTVSLLLLHLFLHDYSGSTIRAPGALKTP 180
Query: 178 TLTSCISLNASVVASVFIASRLPSRLHVFAIMLFSLLVFLFAPLVTYCVKKYSFRLHLLF 237
LTSCIS+NAS+VASVF+ASRLPSRLHVFA+MLFSL VFLFAPLVTYC+KK++F LHLLF
Sbjct: 181 NLTSCISVNASIVASVFVASRLPSRLHVFAVMLFSLQVFLFAPLVTYCIKKFNFGLHLLF 240
Query: 238 SVALMIVTLAXXXXXXXXXXXXXXXXXXXXXXXCPYWLIRIQEYKFEINGPWDEAKLCFD 297
S ALM +TL CPYWLIR+QEYKFEINGPWDEAKLCFD
Sbjct: 241 SFALMGLTLYSIYALHRLFFLVFLSLVLLVNVVCPYWLIRMQEYKFEINGPWDEAKLCFD 300
Query: 298 ITD 300
ITD
Sbjct: 301 ITD 303
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| DICTYBASE|DDB_G0286221 pigC "phosphatidylinositol glycan, class C" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
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| MGI|MGI:1914542 Pigc "phosphatidylinositol glycan anchor biosynthesis, class C" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
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| RGD|1311337 Pigc "phosphatidylinositol glycan anchor biosynthesis, class C" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
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| ASPGD|ASPL0000075757 AN11232 [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q3ZBX1 PIGC "Phosphatidylinositol N-acetylglucosaminyltransferase subunit C" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q92535 PIGC "Phosphatidylinositol N-acetylglucosaminyltransferase subunit C" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| UNIPROTKB|E2REG5 PIGC "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
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| UNIPROTKB|D0G788 PIGC "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
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| POMBASE|SPCC550.04c gpi2 "pig-C (predicted)" [Schizosaccharomyces pombe (taxid:4896)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 300 | |||
| pfam06432 | 268 | pfam06432, GPI2, Phosphatidylinositol N-acetylgluc | 3e-97 |
| >gnl|CDD|219026 pfam06432, GPI2, Phosphatidylinositol N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Score = 286 bits (735), Expect = 3e-97
Identities = 112/278 (40%), Positives = 171/278 (61%), Gaps = 10/278 (3%)
Query: 13 WRKVAYGGMQPGFEDNHTDESFLEQMVMNASVVKRDILKVMQDSVSISQYLCIVALVVLV 72
W+KV Y + + DN+TD SFLE++ N +V D KV+ DS+ ISQ + V L +LV
Sbjct: 1 WKKVLY--EKQPYPDNYTDPSFLEELRRNVNVRTYDYWKVVLDSLVISQQISNVVLFLLV 58
Query: 73 WAYTLRSSLDENSLLLLDVSLLGTGFLILVLTEGMLSLNLLFHYILNISFFITGLYVLAP 132
+ Y + + SLLL+ + LL G+++ L +G SL + + L +L+P
Sbjct: 59 FVYIYQGRVSPESLLLVSLGLLLLGYVLWDLVDGGGSLLHRLSDLKSALLITFFLLLLSP 118
Query: 133 IYQTLTRSISSDSIWALTISLLVLHLFLHDYSGSTIKAPGALQNPTLTSCISLNASVVAS 192
+ +TLT+S SSD+IWAL+ LL+LHL HDY K L+S +S NA++ AS
Sbjct: 119 VLKTLTKSTSSDTIWALSFWLLLLHLLFHDYGYLNTKQ--------LSSSLSTNAALFAS 170
Query: 193 VFIASRLPSRLHVFAIMLFSLLVFLFAPLVTYCVKKYSFRLHLLFSVALMIVTLAFVHML 252
+ +ASRLPS LHVFA +LF++ +F P++ ++K S RLH++ + AL I+ + + L
Sbjct: 171 IVLASRLPSTLHVFAFLLFAIQLFALLPILRRSIRKTSRRLHVVLTFALSILAVYLLLTL 230
Query: 253 HQLLFVLFLGLLVFVNVVCPYWLIRIQEYKFEINGPWD 290
+L +LFL ++F++ VCP W IR+Q+YK EI+GPWD
Sbjct: 231 SPILALLFLLTVLFISFVCPLWFIRLQKYKNEIHGPWD 268
|
Glycosylphosphatidylinositol (GPI) represents an important anchoring molecule for cell surface proteins. The first step in its synthesis is the transfer of N-acetylglucosamine (GlcNAc) from UDP-N-acetylglucosamine to phosphatidylinositol (PI). This step involves products of three or four genes in both yeast (GPI1, GPI2 and GPI3) and mammals (GPI1, PIG A, PIG H and PIG C), respectively. Length = 268 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 300 | |||
| PF06432 | 282 | GPI2: Phosphatidylinositol N-acetylglucosaminyltra | 100.0 | |
| KOG3059 | 292 | consensus N-acetylglucosaminyltransferase complex, | 100.0 |
| >PF06432 GPI2: Phosphatidylinositol N-acetylglucosaminyltransferase; InterPro: IPR009450 Glycosylphosphatidylinositol (GPI) represents an important anchoring molecule for cell surface proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-88 Score=629.42 Aligned_cols=273 Identities=38% Similarity=0.643 Sum_probs=256.6
Q ss_pred ccccccCCCCCCCCCCCCChhhHHHHHhcCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchhHHHHHHH
Q 022236 13 WRKVAYGGMQPGFEDNHTDESFLEQMVMNASVVKRDILKVMQDSVSISQYLCIVALVVLVWAYTLRSSLDENSLLLLDVS 92 (300)
Q Consensus 13 WkKvLy~~~kQ~yPDNYtD~sFL~~L~~N~~v~~~~y~~~v~~~~~v~q~is~v~lf~~~F~~l~~~~~~p~~l~~~~~~ 92 (300)
|||+|| +||||||||||++||||||+|.++++|+|++++.|+..|+||+|+|++|+++|.++++|+++|+.+.+.+.+
T Consensus 1 WkKvLy--~~Q~ypDNYtd~sFL~~l~~N~~~~~~~y~~~v~~~~~v~q~is~v~lf~~~F~~l~~~~~~~~~~~~~~~~ 78 (282)
T PF06432_consen 1 WKKVLY--EKQPYPDNYTDPSFLEELRRNVNVRKYSYWELVLDSLVVSQQISSVVLFLLVFVYLYEGRLSPRVLLWISTA 78 (282)
T ss_pred Cchhhc--cCCCCCCCCCCHHHHHHHHHccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHH
Confidence 999999 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcccc-------chhhHHHhHHHHHHHHHHHHHHhHHHHHhhhhcccchHHHHHHHHHHHHHHhhcCCC
Q 022236 93 LLGTGFLILVLTEGML-------SLNLLFHYILNISFFITGLYVLAPIYQTLTRSISSDSIWALTISLLVLHLFLHDYSG 165 (300)
Q Consensus 93 l~~~g~~~~~~~~~~~-------~~~~~~~~~ks~~i~~~~l~~LSPVLkTLT~s~SsDSIwals~~l~l~~l~~~DY~~ 165 (300)
++++||++|...+++. +...+.+++|+++++++++++|||||||||+|||||||||||++++++|+++|||++
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ks~~li~~~l~~LSPVLkTLT~s~SsDSI~Als~~l~l~~l~~~DY~~ 158 (282)
T PF06432_consen 79 LTLLGYILWDLLSSKENREGRSSRLSSRLRNLKSSLLIFFFLLLLSPVLKTLTKSTSSDSIWALSFWLFLLHLLFHDYSY 158 (282)
T ss_pred HHHHHHHHHHHHhccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCccHHHHHHHHHHHHHHHHhccc
Confidence 9999999998765332 345688999999999999999999999999999999999999999999999999997
Q ss_pred CccCCCCCCCCCCcccchhhhHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHhhhhhhHHhhhcccchHHHHHHHHHHHH
Q 022236 166 STIKAPGALQNPTLTSCISLNASVVASVFIASRLPSRLHVFAIMLFSLLVFLFAPLVTYCVKKYSFRLHLLFSVALMIVT 245 (300)
Q Consensus 166 ~~~~~~~~~~~~~~~~~lSlNaal~asvvLASRL~s~~~VF~lll~ai~lf~l~P~~r~~~~~~s~~~~~~~t~~~~~~~ 245 (300)
.+...+. +++.++++|+|||++|||||||||+|+.|||+|++||+|+|+++|.+||++|++++..|..+++.++..+
T Consensus 159 ~~~~~~~---~~~~~~~lSlNaAl~asvvLASRL~s~~~VF~lll~ai~lF~l~P~~r~~l~~~s~~~~~~l~~~l~~~~ 235 (282)
T PF06432_consen 159 SNSYVSR---GISLPSSLSLNAALFASVVLASRLPSTLHVFALLLFAIQLFALFPIFRRRLRRHSPNAHVVLTFILVILA 235 (282)
T ss_pred ccccccc---cCCCCCcchHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHhHHHHHHHHHhCchHHHHHHHHHHHHH
Confidence 6543221 1357999999999999999999999999999999999999999999999999999999999999988888
Q ss_pred HHHH--HHHHHHHHHHHHHHHHHHHHhhHHHHHHhhccCCcccCCcc
Q 022236 246 LAFV--HMLHQLLFVLFLGLLVFVNVVCPYWLIRIQEYKFEINGPWD 290 (300)
Q Consensus 246 ~~~~--~~~s~~~~~~~~~~~~~i~~v~P~~~v~~q~yK~~I~GPWD 290 (300)
.+++ +..+...+++|++++++++++||+||+++|||||||+||||
T Consensus 236 ~~~l~~~~~~~~~~~~~~~~~~~i~~v~P~~~v~~Q~yK~~I~GPWD 282 (282)
T PF06432_consen 236 VYLLVYYPLSWSLAVLFLLLVLFITFVCPWWFVRLQRYKNEIHGPWD 282 (282)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCccCCCC
Confidence 8877 78899999999999999999999999999999999999999
|
The first step in its synthesis is the transfer of N-acetylglucosamine (GlcNAc) from UDP-N-acetylglucosamine to phosphatidylinositol (PI). This step involves products of three or four genes in both yeast (GPI1, GPI2 and GPI3) and mammals (GPI1, PIG A, PIG H and PIG C), respectively.; GO: 0017176 phosphatidylinositol N-acetylglucosaminyltransferase activity, 0006506 GPI anchor biosynthetic process, 0016021 integral to membrane |
| >KOG3059 consensus N-acetylglucosaminyltransferase complex, subunit PIG-C/GPI2, required for phosphatidylinositol biosynthesis [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00