Citrus Sinensis ID: 022276


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300
MERLILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAGNVASIELPHISFSFLFTVSSPK
cHHHHHHHHHHHHHHHHHHHHHccccccHHHHHcccccccccHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHcccccEEEcccccccccHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHcccccccHHHHHcccccccccccccccccccccccHHHHHHHHHccccccccccccccccccccccccccccEEEcccEEccccHHHHHHHHHHccccccccccccccccccEEEccccccc
ccHHHHHHHHHHHHHHHHHHHHHcccccccEEEEcccccccccccHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHccccccEEEEcccccccHHHHHHHHcccccccccccccccccccccccccccEEHHHHcccccccEccccEcHHHHHHHHHHHHHHHHHccccccEcHHHHHHHcccccHHHccccccccEcccHHHHHHHHHHccccccHcccccEEEcccccccccccEEEEEcccEEccccHHHHHHHHHHcccEEEEEEEEEcccccEEEEccccccc
MERLILSSLLLLLLSSVLASavavndddamirqvvpsdgeqsedhllnAEHHFSLfkskfsktyatqeeHDYRFRVFKANLRRAKrrqlldptavhgvtkfsdltpsEFRRQFLGlnrrlrlpadaqkapilptndlptdfdwrdhgavtgvkdqgacgscwsfsatgalegahflstgelvslseqqlvdcdhecdpeesgscdsgcngglmNSAFEYILKAggverekdypytgtdggsckfdksKIAAAVSnfsvissdEDQMAANLVkhgplagnvasielphisFSFLFTVSSPK
MERLILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAkrrqlldptavhgvtkfsdltpseFRRQFLGLNRRLrlpadaqkapilptndlptdFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAGNVASIELPHISFSFLFTVSSPK
MERLIlssllllllssvlasavavNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAGNVASIELPHISFSFLFTVSSPK
***LILSSLLLLLLSSVLASAVAVNDDDAMIRQV************LNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDH***********SGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVIS*****MAANLVKHGPLAGNVASIELPHISFSFLFTV****
****ILSSLLLLLLSSVLASAVAVNDDDAMIRQV************LNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFL********************NDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAGNVASIELPHISFSFLFTVS***
MERLILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCD***********DSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAGNVASIELPHISFSFLFTVSSPK
*ERLILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNR********QKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAGNVASIELPHISFSFLFTVSSP*
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iiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooo
SSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MERLILSSLLLLLLSSVLASAVAVNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAGNVASIELPHISFSFLFTVSSPK
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query300 2.2.26 [Sep-21-2011]
P25804363 Cysteine proteinase 15A O N/A no 0.85 0.702 0.748 1e-113
P43296368 Cysteine proteinase RD19a no no 0.91 0.741 0.702 1e-109
P43295361 Probable cysteine protein no no 0.893 0.742 0.683 1e-108
Q10716371 Cysteine proteinase 1 OS= N/A no 0.886 0.716 0.622 1e-95
P04988343 Cysteine proteinase 1 OS= yes no 0.763 0.667 0.464 3e-55
Q26636339 Cathepsin L OS=Sarcophaga N/A no 0.78 0.690 0.406 2e-44
Q80LP4337 Viral cathepsin OS=Adoxop N/A no 0.786 0.700 0.366 2e-44
P04989 376 Cysteine proteinase 2 OS= no no 0.77 0.614 0.400 1e-43
P14658 450 Cysteine proteinase OS=Tr N/A no 0.816 0.544 0.378 1e-43
Q9LT77362 Probable cysteine protein no no 0.69 0.571 0.414 5e-42
>sp|P25804|CYSP_PEA Cysteine proteinase 15A OS=Pisum sativum PE=2 SV=1 Back     alignment and function desciption
 Score =  409 bits (1050), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 196/262 (74%), Positives = 228/262 (87%), Gaps = 7/262 (2%)

Query: 18  LASAVA--VNDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFR 75
           +A+AV    N+DD +IRQVV    +  EDHLLNAEHHF+ FKSKFSK+YAT+EEHDYRF 
Sbjct: 15  VATAVTDDTNNDDFIIRQVV----DNEEDHLLNAEHHFTSFKSKFSKSYATKEEHDYRFG 70

Query: 76  VFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTN 135
           VFK+NL +AK  Q  DPTA HG+TKFSDLT SEFRRQFLGL +RLRLPA AQKAPILPT 
Sbjct: 71  VFKSNLIKAKLHQNRDPTAEHGITKFSDLTASEFRRQFLGLKKRLRLPAHAQKAPILPTT 130

Query: 136 DLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHE 195
           +LP DFDWR+ GAVT VKDQG+CGSCW+FS TGALEGAH+L+TG+LVSLSEQQLVDCDH 
Sbjct: 131 NLPEDFDWREKGAVTPVKDQGSCGSCWAFSTTGALEGAHYLATGKLVSLSEQQLVDCDHV 190

Query: 196 CDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSN 255
           CDPE++GSCDSGCNGGLMN+AFEY+L++GGV +EKDY YTG D GSCKFDKSK+ A+VSN
Sbjct: 191 CDPEQAGSCDSGCNGGLMNNAFEYLLESGGVVQEKDYAYTGRD-GSCKFDKSKVVASVSN 249

Query: 256 FSVISSDEDQMAANLVKHGPLA 277
           FSV++ DEDQ+AANLVK+GPLA
Sbjct: 250 FSVVTLDEDQIAANLVKNGPLA 271





Pisum sativum (taxid: 3888)
EC: 3EC: .EC: 4EC: .EC: 2EC: 2EC: .EC: -
>sp|P43296|RD19A_ARATH Cysteine proteinase RD19a OS=Arabidopsis thaliana GN=RD19A PE=2 SV=1 Back     alignment and function description
>sp|P43295|A494_ARATH Probable cysteine proteinase A494 OS=Arabidopsis thaliana GN=At2g21430 PE=2 SV=2 Back     alignment and function description
>sp|Q10716|CYSP1_MAIZE Cysteine proteinase 1 OS=Zea mays GN=CCP1 PE=2 SV=1 Back     alignment and function description
>sp|P04988|CYSP1_DICDI Cysteine proteinase 1 OS=Dictyostelium discoideum GN=cprA PE=1 SV=2 Back     alignment and function description
>sp|Q26636|CATL_SARPE Cathepsin L OS=Sarcophaga peregrina PE=1 SV=1 Back     alignment and function description
>sp|Q80LP4|CATV_NPVAH Viral cathepsin OS=Adoxophyes honmai nucleopolyhedrovirus GN=VCATH PE=3 SV=1 Back     alignment and function description
>sp|P04989|CYSP2_DICDI Cysteine proteinase 2 OS=Dictyostelium discoideum GN=cprB PE=2 SV=1 Back     alignment and function description
>sp|P14658|CYSP_TRYBB Cysteine proteinase OS=Trypanosoma brucei brucei PE=1 SV=1 Back     alignment and function description
>sp|Q9LT77|CPR1_ARATH Probable cysteine proteinase At3g19400 OS=Arabidopsis thaliana GN=At3g19400 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query300
317106675368 JHL18I08.12 [Jatropha curcas] 0.963 0.785 0.728 1e-124
224066056367 predicted protein [Populus trichocarpa] 0.86 0.702 0.809 1e-123
118485796367 unknown [Populus trichocarpa] 0.86 0.702 0.809 1e-123
118489556367 unknown [Populus trichocarpa x Populus d 0.86 0.702 0.809 1e-123
118485910367 unknown [Populus trichocarpa] 0.823 0.673 0.828 1e-122
255538808366 cysteine protease, putative [Ricinus com 0.966 0.792 0.684 1e-118
356509908366 PREDICTED: cysteine proteinase RD19a-lik 0.97 0.795 0.703 1e-118
359806140366 uncharacterized protein LOC100778716 pre 0.92 0.754 0.722 1e-117
124484383369 cysteine proteinase precursor [Ipomoea n 0.9 0.731 0.718 1e-115
5051468363 putative preprocysteine proteinase [Nico 0.896 0.741 0.732 1e-115
>gi|317106675|dbj|BAJ53178.1| JHL18I08.12 [Jatropha curcas] Back     alignment and taxonomy information
 Score =  451 bits (1160), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 217/298 (72%), Positives = 255/298 (85%), Gaps = 9/298 (3%)

Query: 3   RLILSSLLLLLLSSVLASAVAVND-DDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFS 61
           R ++S L+  LLS  +AS  + ++ DD +IRQVVP DG+Q  DHLLNAEHHF+ FK+KF 
Sbjct: 4   RCLISFLVYALLSFTIASTTSPDELDDPLIRQVVP-DGDQ--DHLLNAEHHFTTFKAKFG 60

Query: 62  KTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLR 121
           KTYATQEEHDYRF++FKANLRRA++ Q++DPTAVHGVT FSDLTP EFRRQ+LGL RRLR
Sbjct: 61  KTYATQEEHDYRFKLFKANLRRARKHQMMDPTAVHGVTMFSDLTPREFRRQYLGL-RRLR 119

Query: 122 LPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGEL 181
           LPADA +APILPTNDLPTDFDWRDHGAVT VK+QG+CGSCWSFSA GALEGAHFL+TGEL
Sbjct: 120 LPADAHEAPILPTNDLPTDFDWRDHGAVTNVKNQGSCGSCWSFSAAGALEGAHFLATGEL 179

Query: 182 VSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGS 241
           VSLSEQQLVDCDHECDPEE G+CDSGCNGGLM +AFEY LKAGG+ERE+DYPYTG D G 
Sbjct: 180 VSLSEQQLVDCDHECDPEEYGACDSGCNGGLMTTAFEYTLKAGGLEREEDYPYTGNDRGP 239

Query: 242 CKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAGNVASIELPHISFSFLFTVSSP 299
           CKFD++KI A+VSNFSV+S DEDQ+AANLVKHGPLA  + ++ +     +++  VS P
Sbjct: 240 CKFDRNKIVASVSNFSVVSIDEDQIAANLVKHGPLAVGINAVFMQ----TYMGGVSCP 293




Source: Jatropha curcas

Species: Jatropha curcas

Genus: Jatropha

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224066056|ref|XP_002302004.1| predicted protein [Populus trichocarpa] gi|222843730|gb|EEE81277.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|118485796|gb|ABK94746.1| unknown [Populus trichocarpa] Back     alignment and taxonomy information
>gi|118489556|gb|ABK96580.1| unknown [Populus trichocarpa x Populus deltoides] Back     alignment and taxonomy information
>gi|118485910|gb|ABK94801.1| unknown [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255538808|ref|XP_002510469.1| cysteine protease, putative [Ricinus communis] gi|223551170|gb|EEF52656.1| cysteine protease, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|356509908|ref|XP_003523684.1| PREDICTED: cysteine proteinase RD19a-like [Glycine max] Back     alignment and taxonomy information
>gi|359806140|ref|NP_001241450.1| uncharacterized protein LOC100778716 precursor [Glycine max] gi|255639509|gb|ACU20049.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|124484383|dbj|BAF46302.1| cysteine proteinase precursor [Ipomoea nil] Back     alignment and taxonomy information
>gi|5051468|emb|CAB44983.1| putative preprocysteine proteinase [Nicotiana tabacum] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query300
TAIR|locus:2130180373 AT4G16190 [Arabidopsis thalian 0.813 0.654 0.778 1.2e-104
TAIR|locus:2120222368 RD19 "RESPONSIVE TO DEHYDRATIO 0.83 0.676 0.736 3.1e-99
TAIR|locus:2050145361 AT2G21430 [Arabidopsis thalian 0.826 0.686 0.718 7.4e-98
TAIR|locus:2082687367 AT3G54940 [Arabidopsis thalian 0.83 0.678 0.533 6.1e-71
DICTYBASE|DDB_G0290957343 cprA "cysteine proteinase 1" [ 0.786 0.688 0.455 2.1e-52
DICTYBASE|DDB_G0291191352 DDB_G0291191 "cysteine proteas 0.746 0.636 0.426 1.6e-47
ZFIN|ZDB-GENE-030131-9831473 ctsf "cathepsin F" [Danio reri 0.71 0.450 0.434 3.9e-44
DICTYBASE|DDB_G0279799 376 cprB "cysteine proteinase 2" [ 0.77 0.614 0.400 5.2e-42
UNIPROTKB|Q0VCU3460 CTSF "Uncharacterized protein" 0.71 0.463 0.436 2.8e-41
UNIPROTKB|E2RR02460 CTSF "Uncharacterized protein" 0.81 0.528 0.386 7.5e-41
TAIR|locus:2130180 AT4G16190 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1036 (369.7 bits), Expect = 1.2e-104, P = 1.2e-104
 Identities = 193/248 (77%), Positives = 221/248 (89%)

Query:    31 IRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLL 90
             IRQVVP   E++++ LLNAEHHF+LFKSK+ KTYATQ EHD+RFRVFKANLRRA+R QLL
Sbjct:    36 IRQVVP---EENDEQLLNAEHHFTLFKSKYEKTYATQVEHDHRFRVFKANLRRARRNQLL 92

Query:    91 DPTAVHGVTKFSDLTPSEFRRQFLGLNRR-LRLPADAQKAPILPTNDLPTDFDWRDHGAV 149
             DP+AVHGVT+FSDLTP EFRR+FLGL RR  RLP D Q APILPT+DLPT+FDWR+ GAV
Sbjct:    93 DPSAVHGVTQFSDLTPKEFRRKFLGLKRRGFRLPTDTQTAPILPTSDLPTEFDWREQGAV 152

Query:   150 TGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCN 209
             T VK+QG CGSCWSFSA GALEGAHFL+T ELVSLSEQQLVDCDHECDP ++ SCDSGC+
Sbjct:   153 TPVKNQGMCGSCWSFSAIGALEGAHFLATKELVSLSEQQLVDCDHECDPAQANSCDSGCS 212

Query:   210 GGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAAN 269
             GGLMN+AFEY LKAGG+ +E+DYPYTG D  +CKFDKSKI A+VSNFSV+SSDEDQ+AAN
Sbjct:   213 GGLMNNAFEYALKAGGLMKEEDYPYTGRDHTACKFDKSKIVASVSNFSVVSSDEDQIAAN 272

Query:   270 LVKHGPLA 277
             LV+HGPLA
Sbjct:   273 LVQHGPLA 280




GO:0005576 "extracellular region" evidence=ISM
GO:0006508 "proteolysis" evidence=IEA;ISS
GO:0008234 "cysteine-type peptidase activity" evidence=IEA;ISS
GO:0005773 "vacuole" evidence=IDA
GO:0042744 "hydrogen peroxide catabolic process" evidence=RCA
TAIR|locus:2120222 RD19 "RESPONSIVE TO DEHYDRATION 19" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2050145 AT2G21430 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2082687 AT3G54940 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0290957 cprA "cysteine proteinase 1" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0291191 DDB_G0291191 "cysteine protease" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030131-9831 ctsf "cathepsin F" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0279799 cprB "cysteine proteinase 2" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
UNIPROTKB|Q0VCU3 CTSF "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|E2RR02 CTSF "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P25804CYSP_PEA3, ., 4, ., 2, 2, ., -0.74800.850.7024N/Ano

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.4.220.766

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query300
pfam00112213 pfam00112, Peptidase_C1, Papain family cysteine pr 2e-70
cd02248210 cd02248, Peptidase_C1A, Peptidase C1A subfamily (M 3e-66
smart00645175 smart00645, Pept_C1, Papain family cysteine protea 3e-53
PTZ00203348 PTZ00203, PTZ00203, cathepsin L protease; Provisio 2e-48
PTZ00021489 PTZ00021, PTZ00021, falcipain-2; Provisional 9e-43
PTZ00200448 PTZ00200, PTZ00200, cysteine proteinase; Provision 6e-34
cd02619223 cd02619, Peptidase_C1, C1 Peptidase family (MEROPS 4e-23
cd02621243 cd02621, Peptidase_C1A_CathepsinC, Cathepsin C; al 3e-19
cd02620236 cd02620, Peptidase_C1A_CathepsinB, Cathepsin B gro 2e-18
smart0084857 smart00848, Inhibitor_I29, Cathepsin propeptide in 4e-18
pfam0824658 pfam08246, Inhibitor_I29, Cathepsin propeptide inh 2e-15
cd02698239 cd02698, Peptidase_C1A_CathepsinX, Cathepsin X; th 4e-14
COG4870 372 COG4870, COG4870, Cysteine protease [Posttranslati 4e-10
PTZ00049 693 PTZ00049, PTZ00049, cathepsin C-like protein; Prov 2e-07
PTZ00364 548 PTZ00364, PTZ00364, dipeptidyl-peptidase I precurs 1e-06
>gnl|CDD|215726 pfam00112, Peptidase_C1, Papain family cysteine protease Back     alignment and domain information
 Score =  217 bits (554), Expect = 2e-70
 Identities = 80/158 (50%), Positives = 100/158 (63%), Gaps = 15/158 (9%)

Query: 137 LPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHEC 196
           LP  FDWR+ GAVT VKDQG CGSCW+FSA GALEG + + TG+LVSLSEQQLVDCD   
Sbjct: 1   LPESFDWREKGAVTPVKDQGQCGSCWAFSAVGALEGRYCIKTGKLVSLSEQQLVDCDTGN 60

Query: 197 DPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAA-VSN 255
           +         GCNGGL ++AFEYI K GG+  E DYPYT  D G+CKF KS    A +  
Sbjct: 61  N---------GCNGGLPDNAFEYIKKNGGIVTESDYPYTAHD-GTCKFKKSNSKYAKIKG 110

Query: 256 FSVISS-DEDQMAANLVKHGPLAGNVASIELPHISFSF 292
           +  +   DE+ + A L K+GP++    +I+     F  
Sbjct: 111 YGDVPYNDEEALQAALAKNGPVS---VAIDAYEDDFQL 145


Length = 213

>gnl|CDD|239068 cd02248, Peptidase_C1A, Peptidase C1A subfamily (MEROPS database nomenclature); composed of cysteine peptidases (CPs) similar to papain, including the mammalian CPs (cathepsins B, C, F, H, L, K, O, S, V, X and W) Back     alignment and domain information
>gnl|CDD|214761 smart00645, Pept_C1, Papain family cysteine protease Back     alignment and domain information
>gnl|CDD|185513 PTZ00203, PTZ00203, cathepsin L protease; Provisional Back     alignment and domain information
>gnl|CDD|240232 PTZ00021, PTZ00021, falcipain-2; Provisional Back     alignment and domain information
>gnl|CDD|240310 PTZ00200, PTZ00200, cysteine proteinase; Provisional Back     alignment and domain information
>gnl|CDD|239110 cd02619, Peptidase_C1, C1 Peptidase family (MEROPS database nomenclature), also referred to as the papain family; composed of two subfamilies of cysteine peptidases (CPs), C1A (papain) and C1B (bleomycin hydrolase) Back     alignment and domain information
>gnl|CDD|239112 cd02621, Peptidase_C1A_CathepsinC, Cathepsin C; also known as Dipeptidyl Peptidase I (DPPI), an atypical papain-like cysteine peptidase with chloride dependency and dipeptidyl aminopeptidase activity, resulting from its tetrameric structure which limits substrate access Back     alignment and domain information
>gnl|CDD|239111 cd02620, Peptidase_C1A_CathepsinB, Cathepsin B group; composed of cathepsin B and similar proteins, including tubulointerstitial nephritis antigen (TIN-Ag) Back     alignment and domain information
>gnl|CDD|214853 smart00848, Inhibitor_I29, Cathepsin propeptide inhibitor domain (I29) Back     alignment and domain information
>gnl|CDD|219764 pfam08246, Inhibitor_I29, Cathepsin propeptide inhibitor domain (I29) Back     alignment and domain information
>gnl|CDD|239149 cd02698, Peptidase_C1A_CathepsinX, Cathepsin X; the only papain-like lysosomal cysteine peptidase exhibiting carboxymonopeptidase activity Back     alignment and domain information
>gnl|CDD|227207 COG4870, COG4870, Cysteine protease [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>gnl|CDD|240244 PTZ00049, PTZ00049, cathepsin C-like protein; Provisional Back     alignment and domain information
>gnl|CDD|240381 PTZ00364, PTZ00364, dipeptidyl-peptidase I precursor; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 300
KOG1542372 consensus Cysteine proteinase Cathepsin F [Posttra 100.0
PTZ00203348 cathepsin L protease; Provisional 100.0
PTZ00021489 falcipain-2; Provisional 100.0
PTZ00200448 cysteine proteinase; Provisional 100.0
KOG1543325 consensus Cysteine proteinase Cathepsin L [Posttra 100.0
cd02621243 Peptidase_C1A_CathepsinC Cathepsin C; also known a 100.0
cd02698239 Peptidase_C1A_CathepsinX Cathepsin X; the only pap 100.0
cd02248210 Peptidase_C1A Peptidase C1A subfamily (MEROPS data 100.0
cd02620236 Peptidase_C1A_CathepsinB Cathepsin B group; compos 100.0
PTZ00364 548 dipeptidyl-peptidase I precursor; Provisional 100.0
PTZ00049693 cathepsin C-like protein; Provisional 100.0
PF00112219 Peptidase_C1: Papain family cysteine protease This 100.0
smart00645174 Pept_C1 Papain family cysteine protease. 99.97
cd02619223 Peptidase_C1 C1 Peptidase family (MEROPS database 99.97
KOG1544470 consensus Predicted cysteine proteinase TIN-ag [Ge 99.96
PTZ00462 1004 Serine-repeat antigen protein; Provisional 99.95
PF0824658 Inhibitor_I29: Cathepsin propeptide inhibitor doma 99.66
smart0084857 Inhibitor_I29 Cathepsin propeptide inhibitor domai 99.49
COG4870 372 Cysteine protease [Posttranslational modification, 99.36
cd00585 437 Peptidase_C1B Peptidase C1B subfamily (MEROPS data 98.68
PF03051 438 Peptidase_C1_2: Peptidase C1-like family This fami 97.68
COG3579 444 PepC Aminopeptidase C [Amino acid transport and me 91.43
KOG4128 457 consensus Bleomycin hydrolases and aminopeptidases 89.94
PF0812741 Propeptide_C1: Peptidase family C1 propeptide; Int 88.19
>KOG1542 consensus Cysteine proteinase Cathepsin F [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
Probab=100.00  E-value=4.6e-71  Score=485.26  Aligned_cols=260  Identities=55%  Similarity=0.924  Sum_probs=237.5

Q ss_pred             CCCCCceeeecCCCCCCcchhhccHHHHHHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHhcCCCC-CeeeeeccCCC
Q 022276           25 NDDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKFSD  103 (300)
Q Consensus        25 ~~~~~~i~~~~~~~i~~~~~~l~~~~~~F~~f~~~~~k~Y~s~~E~~~r~~~F~~n~~~I~~~N~~~~-s~~~giN~FsD  103 (300)
                      ..++..|+++....  +.+...++.+++|..|+.+|+|+|.+.+|+.+|+.+|+.|+..+++++..++ +.++|+|+|||
T Consensus        45 ~~~~~~i~~v~~~~--~~~~~~l~~~~~F~~F~~kf~r~Y~s~eE~~~Rl~iF~~N~~~a~~~q~~d~gsA~yGvtqFSD  122 (372)
T KOG1542|consen   45 LGDDLTIRQVVRLQ--DLNPRGLGLEDSFKLFTIKFGRSYASREEHAHRLSIFKHNLLRAERLQENDPGSAEYGVTQFSD  122 (372)
T ss_pred             cchhhhhhhhhhhc--ccCCcccchHHHHHHHHHhcCcccCcHHHHHHHHHHHHHHHHHHHHhhhcCccccccCccchhh
Confidence            45788888887532  2345666779999999999999999999999999999999999999999887 99999999999


Q ss_pred             CChhhHHhhhcCCCcc-CCCCCCCCCCCCCCCCCCCCceecCCCCCccccccCCCCcchHHHHHHHHHHHHHHHhcCCCc
Q 022276          104 LTPSEFRRQFLGLNRR-LRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELV  182 (300)
Q Consensus       104 lt~~Ef~~~~~g~~~~-~~~~~~~~~~~~~~~~~lP~s~DwR~~g~v~pvknQg~CgsCwAfa~~~~~e~~~~i~~~~~~  182 (300)
                      ||++||++++++.+.. .+.+.....++..+...+|++||||++|.||||||||.||||||||+++++|++++|++|+++
T Consensus       123 lT~eEFkk~~l~~~~~~~~~~~~~~~~~~~~~~~lP~~fDWR~kgaVTpVKnQG~CGSCWAFS~tG~vEga~~i~~g~Lv  202 (372)
T KOG1542|consen  123 LTEEEFKKIYLGVKRRGSKLPGDAAEAPIEPGESLPESFDWRDKGAVTPVKNQGMCGSCWAFSTTGAVEGAWAIATGKLV  202 (372)
T ss_pred             cCHHHHHHHhhccccccccCccccccCcCCCCCCCCcccchhccCCccccccCCcCcchhhhhhhhhhhhHHHhhcCccc
Confidence            9999999999887763 344444455555677899999999999999999999999999999999999999999999999


Q ss_pred             cCChhHHHhhCCCCCCCCCCCCCCCCCCCChHHHHHHHHHhCCcCCCcccccCCCCCCCCCCCCCCceEEEceeEEcChh
Q 022276          183 SLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSD  262 (300)
Q Consensus       183 ~lS~Q~lidC~~~~~~~~~~~~~~gC~GG~~~~a~~y~~~~~G~~~e~~yPY~~~~~~~C~~~~~~~~~~i~~~~~v~~~  262 (300)
                      +||||||+||+.         +++||+||.+.+||+|+++.+||+.|++|||++.++..|..++...++.|.+|..++.|
T Consensus       203 sLSEQeLvDCD~---------~d~gC~GGl~~nA~~~~~~~gGL~~E~dYPY~g~~~~~C~~~~~~~~v~I~~f~~l~~n  273 (372)
T KOG1542|consen  203 SLSEQELVDCDS---------CDNGCNGGLMDNAFKYIKKAGGLEKEKDYPYTGKKGNQCHFDKSKIVVSIKDFSMLSNN  273 (372)
T ss_pred             ccchhhhhcccC---------cCCcCCCCChhHHHHHHHHhCCccccccCCccccCCCccccchhhceEEEeccEecCCC
Confidence            999999999996         59999999999999999888999999999999999459999999999999999999999


Q ss_pred             HHHHHHHHHhcCCeEEEEecCCCCCccCeeEec
Q 022276          263 EDQMAANLVKHGPLAGNVASIELPHISFSFLFT  295 (300)
Q Consensus       263 ~~~i~~al~~~GPv~v~i~a~~f~~Y~~Giy~~  295 (300)
                      |++|.+.|+++|||+|+|+|..||+|++||..|
T Consensus       274 E~~ia~wLv~~GPi~vgiNa~~mQ~YrgGV~~P  306 (372)
T KOG1542|consen  274 EDQIAAWLVTFGPLSVGINAKPMQFYRGGVSCP  306 (372)
T ss_pred             HHHHHHHHHhcCCeEEEEchHHHHHhcccccCC
Confidence            999999999999999999999999999999998



>PTZ00203 cathepsin L protease; Provisional Back     alignment and domain information
>PTZ00021 falcipain-2; Provisional Back     alignment and domain information
>PTZ00200 cysteine proteinase; Provisional Back     alignment and domain information
>KOG1543 consensus Cysteine proteinase Cathepsin L [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd02621 Peptidase_C1A_CathepsinC Cathepsin C; also known as Dipeptidyl Peptidase I (DPPI), an atypical papain-like cysteine peptidase with chloride dependency and dipeptidyl aminopeptidase activity, resulting from its tetrameric structure which limits substrate access Back     alignment and domain information
>cd02698 Peptidase_C1A_CathepsinX Cathepsin X; the only papain-like lysosomal cysteine peptidase exhibiting carboxymonopeptidase activity Back     alignment and domain information
>cd02248 Peptidase_C1A Peptidase C1A subfamily (MEROPS database nomenclature); composed of cysteine peptidases (CPs) similar to papain, including the mammalian CPs (cathepsins B, C, F, H, L, K, O, S, V, X and W) Back     alignment and domain information
>cd02620 Peptidase_C1A_CathepsinB Cathepsin B group; composed of cathepsin B and similar proteins, including tubulointerstitial nephritis antigen (TIN-Ag) Back     alignment and domain information
>PTZ00364 dipeptidyl-peptidase I precursor; Provisional Back     alignment and domain information
>PTZ00049 cathepsin C-like protein; Provisional Back     alignment and domain information
>PF00112 Peptidase_C1: Papain family cysteine protease This is family C1 in the peptidase classification Back     alignment and domain information
>smart00645 Pept_C1 Papain family cysteine protease Back     alignment and domain information
>cd02619 Peptidase_C1 C1 Peptidase family (MEROPS database nomenclature), also referred to as the papain family; composed of two subfamilies of cysteine peptidases (CPs), C1A (papain) and C1B (bleomycin hydrolase) Back     alignment and domain information
>KOG1544 consensus Predicted cysteine proteinase TIN-ag [General function prediction only] Back     alignment and domain information
>PTZ00462 Serine-repeat antigen protein; Provisional Back     alignment and domain information
>PF08246 Inhibitor_I29: Cathepsin propeptide inhibitor domain (I29); InterPro: IPR013201 Peptide proteinase inhibitors can be found as single domain proteins or as single or multiple domains within proteins; these are referred to as either simple or compound inhibitors, respectively Back     alignment and domain information
>smart00848 Inhibitor_I29 Cathepsin propeptide inhibitor domain (I29) Back     alignment and domain information
>COG4870 Cysteine protease [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd00585 Peptidase_C1B Peptidase C1B subfamily (MEROPS database nomenclature); composed of eukaryotic bleomycin hydrolases (BH) and bacterial aminopeptidases C (pepC) Back     alignment and domain information
>PF03051 Peptidase_C1_2: Peptidase C1-like family This family is a subfamily of the Prosite entry; InterPro: IPR004134 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>COG3579 PepC Aminopeptidase C [Amino acid transport and metabolism] Back     alignment and domain information
>KOG4128 consensus Bleomycin hydrolases and aminopeptidases of cysteine protease family [Amino acid transport and metabolism] Back     alignment and domain information
>PF08127 Propeptide_C1: Peptidase family C1 propeptide; InterPro: IPR012599 This domain is found at the N-terminal of cathepsin B and cathepsin B-like peptidases that belong to MEROPS peptidase subfamily C1A Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query300
1cjl_A312 Crystal Structure Of A Cysteine Protease Proform Le 9e-36
3qj3_A331 Structure Of Digestive Procathepsin L2 Proteinase F 6e-35
1cs8_A316 Crystal Structure Of Procathepsin L Length = 316 8e-35
2c0y_A315 The Crystal Structure Of A Cys25ala Mutant Of Human 1e-34
3hwn_A258 Cathepsin L With Az13010160 Length = 258 1e-33
3of8_A221 Structural Basis For Reversible And Irreversible In 8e-30
1icf_A175 Crystal Structure Of Mhc Class Ii Associated P41 Ii 8e-30
3h89_A220 A Combined Crystallographic And Molecular Dynamics 9e-30
3hha_A220 Crystal Structure Of Cathepsin L In Complex With Az 9e-30
2o6x_A310 Crystal Structure Of Procathepsin L1 From Fasciola 6e-29
2nqd_B221 Crystal Structure Of Cysteine Protease Inhibitor, C 9e-29
3iv2_A220 Crystal Structure Of Mature Apo-Cathepsin L C25a Mu 1e-28
1fh0_A221 Crystal Structure Of Human Cathepsin V Complexed Wi 1e-28
1mhw_A175 Design Of Non-covalent Inhibitors Of Human Cathepsi 1e-28
3bc3_A220 Exploring Inhibitor Binding At The S Subsites Of Ca 1e-28
3kse_A220 Unreduced Cathepsin L In Complex With Stefin A Leng 2e-28
1cqd_A221 The 2.1 Angstrom Structure Of A Cysteine Protease W 3e-28
1pci_A322 Procaricain Length = 322 6e-28
1iwd_A215 Proposed Amino Acid Sequence And The 1.63 Angstrom 7e-28
2p7u_A215 The Crystal Structure Of Rhodesain, The Major Cyste 1e-27
3qt4_A329 Structure Of Digestive Procathepsin L 3 Of Tenebrio 1e-27
7pck_A314 Crystal Structure Of Wild Type Human Procathepsin K 1e-27
1aim_A215 Cruzain Inhibited By Benzoyl-Tyrosine-Alanine-Fluor 2e-27
1ewp_A215 Cruzain Bound To Mor-Leu-Hpq Length = 215 2e-27
3h6s_A221 Strucure Of Clitocypin - Cathepsin V Complex Length 2e-27
2f1g_A220 Cathepsin S In Complex With Non-Covalent 2-(Benzoxa 4e-27
2vhs_A217 Cathsilicatein, A Chimera Length = 217 4e-27
3iut_A221 The Crystal Structure Of Cruzain In Complex With A 4e-27
3hd3_A215 High Resolution Crystal Structure Of Cruzain Bound 4e-27
3ovx_A218 Cathepsin S In Complex With A Covalent Inhibitor Wi 4e-27
3n3g_A217 4-(3-Trifluoromethylphenyl)-Pyrimidine-2-Carbonitri 5e-27
2fq9_A225 Cathepsin S With Nitrile Inhibitor Length = 225 5e-27
1ms6_A222 Dipeptide Nitrile Inhibitor Bound To Cathepsin S. L 5e-27
1npz_A217 Crystal Structures Of Cathepsin S Inhibitor Complex 9e-27
2g6d_A217 Human Cathepsin S Mutant With Vinyl Sulfone Inhibit 1e-26
2fo5_A 262 Crystal Structure Of Recombinant Barley Cysteine En 1e-26
1s4v_A229 The 2.0 A Crystal Structure Of The Kdel-Tailed Cyst 2e-26
3f75_A224 Activated Toxoplasma Gondii Cathepsin L (Tgcpl) In 2e-26
2fye_A217 Mutant Human Cathepsin S With Irreversible Inhibito 3e-26
3u8e_A222 Crystal Structure Of Cysteine Protease From Bulbs O 5e-26
3kwn_A219 Cathepsin S In Complex With Thioether Acetamide P3 7e-26
3mpe_A220 Crystal Structure Of Human Cathepsin-S C25s Mutant 7e-26
3iej_A222 Pyrazole-Based Cathepsin S Inhibitors With Arylalky 8e-26
1glo_A217 Crystal Structure Of Cys25ser Mutant Of Human Cathe 1e-25
3tnx_A363 Structure Of The Precursor Of A Thermostable Varian 2e-25
8pch_A220 Crystal Structure Of Porcine Cathepsin H Determined 4e-25
2b1m_A246 Crystal Structure Of A Papain-Fold Protein Without 1e-24
3p5w_A220 Actinidin From Actinidia Arguta Planch (Sarusashi) 1e-24
2f7d_A215 A Mutant Rabbit Cathepsin K With A Nitrile Inhibito 2e-23
1yvb_A241 The Plasmodium Falciparum Cysteine Protease Falcipa 2e-23
1aec_A218 Crystal Structure Of Actinidin-E-64 Complex+ Length 2e-23
3p5u_A220 Actinidin From Actinidia Arguta Planch (Sarusashi) 2e-23
3h7d_A215 The Crystal Structure Of The Cathepsin K Variant M5 2e-23
1u9v_A217 Crystal Structure Of The Cysteine Protease Human Ca 3e-23
1m6d_A214 Crystal Structure Of Human Cathepsin F Length = 214 3e-23
1snk_A214 Cathepsin K Complexed With Carbamate Derivatized No 3e-23
1mem_A215 Crystal Structure Of Cathepsin K Complexed With A P 3e-23
2pns_A208 1.9 Angstrom Resolution Crystal Structure Of A Plan 5e-23
1o0e_A208 1.9 Angstrom Crystal Structure Of A Plant Cysteine 2e-22
3ovz_A213 Cathepsin K In Complex With A Covalent Inhibitor Wi 2e-22
1vsn_A215 Crystal Structure Of A Potent Small Molecule Inhibi 2e-22
3pnr_A240 Structure Of Pbicp-C In Complex With Falcipain-2 Le 3e-22
3bcn_A209 Crystal Structure Of A Papain-Like Cysteine Proteas 2e-21
2act_A220 Crystallographic Refinement Of The Structure Of Act 4e-21
2bdz_A214 Mexicain From Jacaratia Mexicana Length = 214 8e-21
1meg_A216 Crystal Structure Of A Caricain D158e Mutant In Com 2e-20
1ppo_A216 Determination Of The Structure Of Papaya Protease O 2e-20
3bpm_A243 Crystal Structure Of Falcipain-3 With Its Inhibitor 3e-19
1yal_A218 Carica Papaya Chymopapain At 1.7 Angstroms Resoluti 3e-18
1gec_E216 Glycyl Endopeptidase-complex With Benzyloxycarbonyl 4e-18
1pip_A212 Crystal Structure Of Papain-Succinyl-Gln-Val-Val-Al 2e-17
1khp_A212 Monoclinic Form Of Papain/zlfg-dam Covalent Complex 2e-17
1ppp_A212 Crystal Structure Of Papain-E64-C Complex. Binding 4e-17
1stf_E212 The Refined 2.4 Angstroms X-Ray Crystal Structure O 3e-16
2cio_A212 The High Resolution X-Ray Structure Of Papain Compl 4e-16
3ima_A212 Complex Strcuture Of Tarocystatin And Papain Length 4e-16
3ioq_A213 Crystal Structure Of The Carica Candamarcensis Cyst 2e-14
1xkg_A312 Crystal Structure Of The Major House Dust Mite Alle 2e-14
3d6s_A223 Crystal Structure Of Mite Allergen Der F 1 Length = 2e-13
3pdf_A441 Discovery Of Novel Cyanamide-Based Inhibitors Of Ca 5e-13
1k3b_B164 Crystal Structure Of Human Dipeptidyl Peptidase I ( 1e-11
3rvw_A222 Crystal Structure Of Der P 1 Complexed With Fab 4c1 3e-11
2as8_A222 Crystal Structure Of Mature And Fully Active Der P 5e-11
3f5v_A222 C2 Crystal Form Of Mite Allergen Der P 1 Length = 2 7e-10
1jqp_A438 Dipeptidyl Peptidase I (Cathepsin C), A Tetrameric 1e-09
3qsd_A254 Structure Of Cathepsin B1 From Schistosoma Mansoni 4e-08
1pbh_A317 Crystal Structure Of Human Recombinant Procathepsin 2e-06
1cpj_A260 Crystal Structures Of Recombinant Rat Cathepsin B A 3e-06
1cte_A254 Crystal Structures Of Recombinant Rat Cathepsin B A 5e-06
1gmy_A261 Cathepsin B Complexed With Dipeptidyl Nitrile Inhib 5e-06
3ai8_B256 Cathepsin B In Complex With The Nitroxoline Length 6e-06
3k9m_A254 Cathepsin B In Complex With Stefin A Length = 254 6e-06
3mor_A317 Crystal Structure Of Cathepsin B From Trypanosoma B 8e-06
3hhi_A325 Crystal Structure Of Cathepsin B From T. Brucei In 8e-06
4hwy_A340 Trypanosoma Brucei Procathepsin B Solved From 40 Fs 9e-06
3f75_P106 Activated Toxoplasma Gondii Cathepsin L (Tgcpl) In 1e-05
1mir_A322 Rat Procathepsin B Length = 322 3e-05
3cbj_A266 Chagasin-cathepsin B Complex Length = 266 8e-05
1deu_A277 Crystal Structure Of Human Procathepsin X: A Cystei 7e-04
>pdb|1CJL|A Chain A, Crystal Structure Of A Cysteine Protease Proform Length = 312 Back     alignment and structure

Iteration: 1

Score = 147 bits (370), Expect = 9e-36, Method: Compositional matrix adjust. Identities = 93/253 (36%), Positives = 132/253 (52%), Gaps = 20/253 (7%) Query: 44 DHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVT---- 99 DH L A+ ++ +K+ ++ Y EE +R V++ N++ + H T Sbjct: 1 DHSLEAQ--WTKWKAMHNRLYGMNEE-GWRRAVWEKNMKMIELHNQEYREGKHSFTMAMN 57 Query: 100 KFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACG 159 F D+T EFR+ GL R + P+ + P DWR+ G VT VK+QG CG Sbjct: 58 AFGDMTSEEFRQVMNGLQNRKPRKGKVFQEPLF--YEAPRSVDWREKGYVTPVKNQGQCG 115 Query: 160 SCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEY 219 S W+FSATGALEG F TG L+SLSEQ LVDC PE + GCNGGLM+ AF+Y Sbjct: 116 SSWAFSATGALEGQMFRKTGRLISLSEQNLVDCS---GPE----GNEGCNGGLMDYAFQY 168 Query: 220 ILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAGN 279 + GG++ E+ YPY T+ SCK++ A + F I E + + GP++ Sbjct: 169 VQDNGGLDSEESYPYEATE-ESCKYNPKYSVANDAGFVDIPKQEKALMKAVATVGPIS-- 225 Query: 280 VASIELPHISFSF 292 +I+ H SF F Sbjct: 226 -VAIDAGHESFLF 237
>pdb|3QJ3|A Chain A, Structure Of Digestive Procathepsin L2 Proteinase From Tenebrio Molitor Larval Midgut Length = 331 Back     alignment and structure
>pdb|1CS8|A Chain A, Crystal Structure Of Procathepsin L Length = 316 Back     alignment and structure
>pdb|2C0Y|A Chain A, The Crystal Structure Of A Cys25ala Mutant Of Human Procathepsin S Length = 315 Back     alignment and structure
>pdb|3HWN|A Chain A, Cathepsin L With Az13010160 Length = 258 Back     alignment and structure
>pdb|3OF8|A Chain A, Structural Basis For Reversible And Irreversible Inhibition Of Human Cathepsin L By Their Respective Dipeptidyl Glyoxal And Diazomethylketone Inhibitors Length = 221 Back     alignment and structure
>pdb|1ICF|A Chain A, Crystal Structure Of Mhc Class Ii Associated P41 Ii Fragment In Complex With Cathepsin L Length = 175 Back     alignment and structure
>pdb|3H89|A Chain A, A Combined Crystallographic And Molecular Dynamics Study Of Cathepsin-L Retro-Binding Inhibitors(Compound 4) Length = 220 Back     alignment and structure
>pdb|3HHA|A Chain A, Crystal Structure Of Cathepsin L In Complex With Az12878478 Length = 220 Back     alignment and structure
>pdb|2O6X|A Chain A, Crystal Structure Of Procathepsin L1 From Fasciola Hepatica Length = 310 Back     alignment and structure
>pdb|2NQD|B Chain B, Crystal Structure Of Cysteine Protease Inhibitor, Chagasin, In Complex With Human Cathepsin L Length = 221 Back     alignment and structure
>pdb|3IV2|A Chain A, Crystal Structure Of Mature Apo-Cathepsin L C25a Mutant Length = 220 Back     alignment and structure
>pdb|1FH0|A Chain A, Crystal Structure Of Human Cathepsin V Complexed With An Irreversible Vinyl Sulfone Inhibitor Length = 221 Back     alignment and structure
>pdb|1MHW|A Chain A, Design Of Non-covalent Inhibitors Of Human Cathepsin L. From The 96- Residue Proregion To Optimized Tripeptides Length = 175 Back     alignment and structure
>pdb|3BC3|A Chain A, Exploring Inhibitor Binding At The S Subsites Of Cathepsin L Length = 220 Back     alignment and structure
>pdb|3KSE|A Chain A, Unreduced Cathepsin L In Complex With Stefin A Length = 220 Back     alignment and structure
>pdb|1CQD|A Chain A, The 2.1 Angstrom Structure Of A Cysteine Protease With Proline Specificity From Ginger Rhizome, Zingiber Officinale Length = 221 Back     alignment and structure
>pdb|1PCI|A Chain A, Procaricain Length = 322 Back     alignment and structure
>pdb|1IWD|A Chain A, Proposed Amino Acid Sequence And The 1.63 Angstrom X-ray Crystal Structure Of A Plant Cysteine Protease Ervatamin B: Insight Into The Structural Basis Of Its Stability And Substrate Specificity Length = 215 Back     alignment and structure
>pdb|2P7U|A Chain A, The Crystal Structure Of Rhodesain, The Major Cysteine Protease Of T. Brucei Rhodesiense, Bound To Inhibitor K777 Length = 215 Back     alignment and structure
>pdb|3QT4|A Chain A, Structure Of Digestive Procathepsin L 3 Of Tenebrio Molitor Larval Midgut Length = 329 Back     alignment and structure
>pdb|7PCK|A Chain A, Crystal Structure Of Wild Type Human Procathepsin K Length = 314 Back     alignment and structure
>pdb|1AIM|A Chain A, Cruzain Inhibited By Benzoyl-Tyrosine-Alanine-Fluoromethylketone Length = 215 Back     alignment and structure
>pdb|1EWP|A Chain A, Cruzain Bound To Mor-Leu-Hpq Length = 215 Back     alignment and structure
>pdb|3H6S|A Chain A, Strucure Of Clitocypin - Cathepsin V Complex Length = 221 Back     alignment and structure
>pdb|2F1G|A Chain A, Cathepsin S In Complex With Non-Covalent 2-(Benzoxazol-2-Ylamino)- Acetamide Length = 220 Back     alignment and structure
>pdb|2VHS|A Chain A, Cathsilicatein, A Chimera Length = 217 Back     alignment and structure
>pdb|3IUT|A Chain A, The Crystal Structure Of Cruzain In Complex With A Tetrafluorophenoxymethyl Ketone Inhibitor Length = 221 Back     alignment and structure
>pdb|3HD3|A Chain A, High Resolution Crystal Structure Of Cruzain Bound To The Vinyl Sulfone Inhibitor Smdc-256047 Length = 215 Back     alignment and structure
>pdb|3OVX|A Chain A, Cathepsin S In Complex With A Covalent Inhibitor With An Aldehyde Warhead Length = 218 Back     alignment and structure
>pdb|3N3G|A Chain A, 4-(3-Trifluoromethylphenyl)-Pyrimidine-2-Carbonitrile As Cathepsin S Inhibitors: N3, Not N1 Is Critically Important Length = 217 Back     alignment and structure
>pdb|2FQ9|A Chain A, Cathepsin S With Nitrile Inhibitor Length = 225 Back     alignment and structure
>pdb|1MS6|A Chain A, Dipeptide Nitrile Inhibitor Bound To Cathepsin S. Length = 222 Back     alignment and structure
>pdb|1NPZ|A Chain A, Crystal Structures Of Cathepsin S Inhibitor Complexes Length = 217 Back     alignment and structure
>pdb|2G6D|A Chain A, Human Cathepsin S Mutant With Vinyl Sulfone Inhibitor Cra- 14009 Length = 217 Back     alignment and structure
>pdb|2FO5|A Chain A, Crystal Structure Of Recombinant Barley Cysteine Endoprotease B Isoform 2 (Ep-B2) In Complex With Leupeptin Length = 262 Back     alignment and structure
>pdb|1S4V|A Chain A, The 2.0 A Crystal Structure Of The Kdel-Tailed Cysteine Endopeptidase Functioning In Programmed Cell Death Of Ricinus Communis Endosperm Length = 229 Back     alignment and structure
>pdb|3F75|A Chain A, Activated Toxoplasma Gondii Cathepsin L (Tgcpl) In Complex With Its Propeptide Length = 224 Back     alignment and structure
>pdb|2FYE|A Chain A, Mutant Human Cathepsin S With Irreversible Inhibitor Cra- 14013 Length = 217 Back     alignment and structure
>pdb|3U8E|A Chain A, Crystal Structure Of Cysteine Protease From Bulbs Of Crocus Sativus At 1.3 A Resolution Length = 222 Back     alignment and structure
>pdb|3KWN|A Chain A, Cathepsin S In Complex With Thioether Acetamide P3 Inhibitor Length = 219 Back     alignment and structure
>pdb|3MPE|A Chain A, Crystal Structure Of Human Cathepsin-S C25s Mutant With Bound Drug Length = 220 Back     alignment and structure
>pdb|3IEJ|A Chain A, Pyrazole-Based Cathepsin S Inhibitors With Arylalkynes As P1 Binding Elements Length = 222 Back     alignment and structure
>pdb|1GLO|A Chain A, Crystal Structure Of Cys25ser Mutant Of Human Cathepsin S Length = 217 Back     alignment and structure
>pdb|3TNX|A Chain A, Structure Of The Precursor Of A Thermostable Variant Of Papain At 2.6 Angstroem Resolution Length = 363 Back     alignment and structure
>pdb|8PCH|A Chain A, Crystal Structure Of Porcine Cathepsin H Determined At 2.1 Angstrom Resolution: Location Of The Mini-Chain C-Terminal Carboxyl Group Defines Cathepsin H Aminopeptidase Function Length = 220 Back     alignment and structure
>pdb|2B1M|A Chain A, Crystal Structure Of A Papain-Fold Protein Without The Catalytic Cysteine From Seeds Of Pachyrhizus Erosus Length = 246 Back     alignment and structure
>pdb|3P5W|A Chain A, Actinidin From Actinidia Arguta Planch (Sarusashi) Length = 220 Back     alignment and structure
>pdb|2F7D|A Chain A, A Mutant Rabbit Cathepsin K With A Nitrile Inhibitor Length = 215 Back     alignment and structure
>pdb|1YVB|A Chain A, The Plasmodium Falciparum Cysteine Protease Falcipain-2 Length = 241 Back     alignment and structure
>pdb|1AEC|A Chain A, Crystal Structure Of Actinidin-E-64 Complex+ Length = 218 Back     alignment and structure
>pdb|3P5U|A Chain A, Actinidin From Actinidia Arguta Planch (Sarusashi) Length = 220 Back     alignment and structure
>pdb|3H7D|A Chain A, The Crystal Structure Of The Cathepsin K Variant M5 In Compl Chondroitin-4-Sulfate Length = 215 Back     alignment and structure
>pdb|1U9V|A Chain A, Crystal Structure Of The Cysteine Protease Human Cathepsin K In Complex With The Covalent Inhibitor Nvp-Abe854 Length = 217 Back     alignment and structure
>pdb|1M6D|A Chain A, Crystal Structure Of Human Cathepsin F Length = 214 Back     alignment and structure
>pdb|1SNK|A Chain A, Cathepsin K Complexed With Carbamate Derivatized Norleucine Aldehyde Length = 214 Back     alignment and structure
>pdb|1MEM|A Chain A, Crystal Structure Of Cathepsin K Complexed With A Potent Vinyl Sulfone Inhibitor Length = 215 Back     alignment and structure
>pdb|2PNS|A Chain A, 1.9 Angstrom Resolution Crystal Structure Of A Plant Cysteine Protease Ervatamin-C Refinement With Cdna Derived Amino Acid Sequence Length = 208 Back     alignment and structure
>pdb|1O0E|A Chain A, 1.9 Angstrom Crystal Structure Of A Plant Cysteine Protease Ervatamin C Length = 208 Back     alignment and structure
>pdb|3OVZ|A Chain A, Cathepsin K In Complex With A Covalent Inhibitor With A Ketoamide Warhead Length = 213 Back     alignment and structure
>pdb|1VSN|A Chain A, Crystal Structure Of A Potent Small Molecule Inhibitor Bound To Cathepsin K Length = 215 Back     alignment and structure
>pdb|3PNR|A Chain A, Structure Of Pbicp-C In Complex With Falcipain-2 Length = 240 Back     alignment and structure
>pdb|3BCN|A Chain A, Crystal Structure Of A Papain-Like Cysteine Protease Ervatamin-A Complexed With Irreversible Inhibitor E-64 Length = 209 Back     alignment and structure
>pdb|2ACT|A Chain A, Crystallographic Refinement Of The Structure Of Actinidin At 1.7 Angstroms Resolution By Fast Fourier Least-Squares Methods Length = 220 Back     alignment and structure
>pdb|2BDZ|A Chain A, Mexicain From Jacaratia Mexicana Length = 214 Back     alignment and structure
>pdb|1MEG|A Chain A, Crystal Structure Of A Caricain D158e Mutant In Complex With E-64 Length = 216 Back     alignment and structure
>pdb|1PPO|A Chain A, Determination Of The Structure Of Papaya Protease Omega Length = 216 Back     alignment and structure
>pdb|3BPM|A Chain A, Crystal Structure Of Falcipain-3 With Its Inhibitor, Leupeptin Length = 243 Back     alignment and structure
>pdb|1YAL|A Chain A, Carica Papaya Chymopapain At 1.7 Angstroms Resolution Length = 218 Back     alignment and structure
>pdb|1GEC|E Chain E, Glycyl Endopeptidase-complex With Benzyloxycarbonyl-leucine-valine- Glycine-methylene Covalently Bound To Cysteine 25 Length = 216 Back     alignment and structure
>pdb|1PIP|A Chain A, Crystal Structure Of Papain-Succinyl-Gln-Val-Val-Ala-Ala-P- Nitroanilide Complex At 1.7 Angstroms Resolution: Noncovalent Binding Mode Of A Common Sequence Of Endogenous Thiol Protease Inhibitors Length = 212 Back     alignment and structure
>pdb|1KHP|A Chain A, Monoclinic Form Of Papain/zlfg-dam Covalent Complex Length = 212 Back     alignment and structure
>pdb|1PPP|A Chain A, Crystal Structure Of Papain-E64-C Complex. Binding Diversity Of E64-C To Papain S2 And S3 Subsites Length = 212 Back     alignment and structure
>pdb|1STF|E Chain E, The Refined 2.4 Angstroms X-Ray Crystal Structure Of Recombinant Human Stefin B In Complex With The Cysteine Proteinase Papain: A Novel Type Of Proteinase Inhibitor Interaction Length = 212 Back     alignment and structure
>pdb|2CIO|A Chain A, The High Resolution X-Ray Structure Of Papain Complexed With Fragments Of The Trypanosoma Brucei Cysteine Protease Inhibitor Icp Length = 212 Back     alignment and structure
>pdb|3IMA|A Chain A, Complex Strcuture Of Tarocystatin And Papain Length = 212 Back     alignment and structure
>pdb|3IOQ|A Chain A, Crystal Structure Of The Carica Candamarcensis Cysteine Protease Cms1ms2 In Complex With E-64 Length = 213 Back     alignment and structure
>pdb|1XKG|A Chain A, Crystal Structure Of The Major House Dust Mite Allergen Der P 1 In Its Pro Form At 1.61 A Resolution Length = 312 Back     alignment and structure
>pdb|3D6S|A Chain A, Crystal Structure Of Mite Allergen Der F 1 Length = 223 Back     alignment and structure
>pdb|3PDF|A Chain A, Discovery Of Novel Cyanamide-Based Inhibitors Of Cathepsin C Length = 441 Back     alignment and structure
>pdb|1K3B|B Chain B, Crystal Structure Of Human Dipeptidyl Peptidase I (Cathepsin C): Exclusion Domain Added To An Endopeptidase Framework Creates The Machine For Activation Of Granular Serine Proteases Length = 164 Back     alignment and structure
>pdb|3RVW|A Chain A, Crystal Structure Of Der P 1 Complexed With Fab 4c1 Length = 222 Back     alignment and structure
>pdb|2AS8|A Chain A, Crystal Structure Of Mature And Fully Active Der P 1 Allergen Length = 222 Back     alignment and structure
>pdb|3F5V|A Chain A, C2 Crystal Form Of Mite Allergen Der P 1 Length = 222 Back     alignment and structure
>pdb|1JQP|A Chain A, Dipeptidyl Peptidase I (Cathepsin C), A Tetrameric Cysteine Protease Of The Papain Family Length = 438 Back     alignment and structure
>pdb|3QSD|A Chain A, Structure Of Cathepsin B1 From Schistosoma Mansoni In Complex With Ca074 Inhibitor Length = 254 Back     alignment and structure
>pdb|1PBH|A Chain A, Crystal Structure Of Human Recombinant Procathepsin B At 3.2 Angstrom Resolution Length = 317 Back     alignment and structure
>pdb|1CPJ|A Chain A, Crystal Structures Of Recombinant Rat Cathepsin B And A Cathepsin B-Inhibitor Complex: Implications For Structure- Based Inhibitor Design Length = 260 Back     alignment and structure
>pdb|1CTE|A Chain A, Crystal Structures Of Recombinant Rat Cathepsin B And A Cathepsin B-Inhibitor Complex: Implications For Structure- Based Inhibitor Design Length = 254 Back     alignment and structure
>pdb|1GMY|A Chain A, Cathepsin B Complexed With Dipeptidyl Nitrile Inhibitor Length = 261 Back     alignment and structure
>pdb|3AI8|B Chain B, Cathepsin B In Complex With The Nitroxoline Length = 256 Back     alignment and structure
>pdb|3K9M|A Chain A, Cathepsin B In Complex With Stefin A Length = 254 Back     alignment and structure
>pdb|3MOR|A Chain A, Crystal Structure Of Cathepsin B From Trypanosoma Brucei Length = 317 Back     alignment and structure
>pdb|3HHI|A Chain A, Crystal Structure Of Cathepsin B From T. Brucei In Complex With Ca074 Length = 325 Back     alignment and structure
>pdb|4HWY|A Chain A, Trypanosoma Brucei Procathepsin B Solved From 40 Fs Free-electron Laser Pulse Data By Serial Femtosecond X-ray Crystallography Length = 340 Back     alignment and structure
>pdb|3F75|P Chain P, Activated Toxoplasma Gondii Cathepsin L (Tgcpl) In Complex With Its Propeptide Length = 106 Back     alignment and structure
>pdb|1MIR|A Chain A, Rat Procathepsin B Length = 322 Back     alignment and structure
>pdb|3CBJ|A Chain A, Chagasin-cathepsin B Complex Length = 266 Back     alignment and structure
>pdb|1DEU|A Chain A, Crystal Structure Of Human Procathepsin X: A Cysteine Protease With The Proregion Covalently Linked To The Active Site Cysteine Length = 277 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query300
2c0y_A315 Procathepsin S; proenzyme, proteinase, hydrolase, 1e-106
3qj3_A331 Cathepsin L-like protein; hydrolase, proteinase, l 1e-105
1cs8_A316 Human procathepsin L; prosegment, propeptide, inhi 1e-105
1xkg_A312 DER P I, major mite fecal allergen DER P 1; major 1e-103
1by8_A314 Protein (procathepsin K); hydrolase(sulfhydryl pro 2e-99
2o6x_A310 Procathepsin L1, secreted cathepsin L 1; hydrolase 3e-98
3qt4_A329 Cathepsin-L-like midgut cysteine proteinase; hydro 1e-95
1pci_A322 Procaricain; zymogen, hydrolase, thiol protease; 3 4e-93
1m6d_A214 Cathepsin F, catsf; papain family cysteine proteas 2e-85
3i06_A215 Cruzipain; autocatalytic cleavage, glycoprotein, p 5e-82
2xu3_A220 Cathepsin L1; hydrolase, drug design, thiol protea 7e-82
2oul_A241 Falcipain 2; cysteine protease, inhibitor, macromo 3e-81
3bwk_A243 Cysteine protease falcipain-3; malaria, hydrolase; 2e-80
3ovx_A218 Cathepsin S; hydrolase, covalent inhibitor, aldehy 8e-79
1cqd_A221 Protein (protease II); cysteine protease, glycopro 8e-79
8pch_A220 Cathepsin H; hydrolase, protease, cysteine protein 2e-78
3f75_A224 Toxopain-2, cathepsin L protease; medical structur 3e-77
1o0e_A208 Ervatamin C; plant cysteine protease, two domain, 6e-77
3pdf_A441 Cathepsin C, dipeptidyl peptidase 1; two domains, 7e-77
2b1m_A246 SPE31; papain-like, sugar binding protein; HET: NA 8e-77
3kwz_A215 Cathepsin K; enzyme inhibitor, covalent reversible 5e-76
1s4v_A229 Cysteine endopeptidase; KDEL ER retention signal, 6e-76
2fo5_A 262 Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cyst 8e-76
1iwd_A215 Ervatamin B; cysteine protease, alpha-beta protein 5e-75
3p5u_A220 Actinidin; SAD, cysteine proteinases, hydrolase; 1 7e-74
3f5v_A222 DER P 1 allergen; allergy, asthma, DUST mites, gly 1e-72
3ioq_A213 CMS1MS2; caricaceae, cysteine protease, papain fam 1e-72
2cio_A212 Papain; hydrolase/inhibitor, complex hydrolase/inh 7e-72
2bdz_A214 Mexicain; cysteine protease, peptidase_C1, papain- 7e-71
1ppo_A216 Protease omega; hydrolase(thiol protease); 1.80A { 9e-71
1yal_A218 Chymopapain; hydrolase, thiol protease; 1.70A {Car 2e-70
2wbf_X265 Serine-repeat antigen protein; SERA, malaria, vacu 3e-63
3u8e_A222 Papain-like cysteine protease; papain-like cystein 2e-61
3hhi_A325 Cathepsin B-like cysteine protease; occluding loop 2e-53
1deu_A277 Procathepsin X; cysteine protease, proregion, pros 1e-51
3pbh_A317 Procathepsin B; thiol protease, cysteine protease, 2e-47
3qsd_A254 Cathepsin B-like peptidase (C01 family); cysteine 2e-47
3ois_A291 Cysteine protease; alpha and beta, hydrolase; HET: 7e-44
3cbj_A266 Cathepsin B; cathepsin B, occluding loop, chagas d 8e-43
3f75_P106 Toxopain-2, cathepsin L propeptide; medical struct 9e-27
2l95_A80 Crammer, LP06209P; cysteine proteinase inhibitor, 1e-13
3pw3_A 383 Aminopeptidase C; bleomycin, cysteine proteinase f 7e-13
>2c0y_A Procathepsin S; proenzyme, proteinase, hydrolase, thiol protease, prosegment binding loop, glycoprotein, lysosome, protease, zymogen; 2.1A {Homo sapiens} Length = 315 Back     alignment and structure
 Score =  311 bits (799), Expect = e-106
 Identities = 82/257 (31%), Positives = 120/257 (46%), Gaps = 19/257 (7%)

Query: 41  QSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVH---- 96
             +  L   +HH+ L+K  + K Y  + E   R  +++ NL+      L     +H    
Sbjct: 3   HKDPTL---DHHWHLWKKTYGKQYKEKNEEAVRRLIWEKNLKFVMLHNLEHSMGMHSYDL 59

Query: 97  GVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQG 156
           G+    D+T  E       L    +   +       P   LP   DWR+ G VT VK QG
Sbjct: 60  GMNHLGDMTSEEVMSLMSSLRVPSQWQRNI-TYKSNPNRILPDSVDWREKGCVTEVKYQG 118

Query: 157 ACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSA 216
           +CG+ W+FSA GALE    L TG+LVSLS Q LVDC            + GCNGG M +A
Sbjct: 119 SCGAAWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCST------EKYGNKGCNGGFMTTA 172

Query: 217 FEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISS-DEDQMAANLVKHGP 275
           F+YI+   G++ +  YPY   D   C++D    AA  S ++ +    ED +   +   GP
Sbjct: 173 FQYIIDNKGIDSDASYPYKAMD-QKCQYDSKYRAATCSKYTELPYGREDVLKEAVANKGP 231

Query: 276 LAGNVASIELPHISFSF 292
           ++  V  ++  H SF  
Sbjct: 232 VS--VG-VDARHPSFFL 245


>3qj3_A Cathepsin L-like protein; hydrolase, proteinase, larVal midgut; 1.85A {Tenebrio molitor} Length = 331 Back     alignment and structure
>1cs8_A Human procathepsin L; prosegment, propeptide, inhibition, hydrolase; HET: OCS; 1.80A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cjl_A 3hwn_A* Length = 316 Back     alignment and structure
>1xkg_A DER P I, major mite fecal allergen DER P 1; major allergen, cysteine protease, house DUST mite, dermatop pteronyssinus; 1.61A {Dermatophagoides pteronyssinus} SCOP: d.3.1.1 Length = 312 Back     alignment and structure
>1by8_A Protein (procathepsin K); hydrolase(sulfhydryl proteinase), papain; 2.60A {Homo sapiens} SCOP: d.3.1.1 PDB: 7pck_A Length = 314 Back     alignment and structure
>2o6x_A Procathepsin L1, secreted cathepsin L 1; hydrolase, thiol protease, cysteine protease, zymogen, hydro; 1.40A {Fasciola hepatica} Length = 310 Back     alignment and structure
>3qt4_A Cathepsin-L-like midgut cysteine proteinase; hydrolase, zymogen, intramolecular DISS bonds, insect larVal midgut; HET: PG4 PG6; 2.11A {Tenebrio molitor} Length = 329 Back     alignment and structure
>1pci_A Procaricain; zymogen, hydrolase, thiol protease; 3.20A {Carica papaya} SCOP: d.3.1.1 Length = 322 Back     alignment and structure
>1m6d_A Cathepsin F, catsf; papain family cysteine protease, hydrolase; HET: MYP; 1.70A {Homo sapiens} SCOP: d.3.1.1 Length = 214 Back     alignment and structure
>3i06_A Cruzipain; autocatalytic cleavage, glycoprotein, protease, thiol protease, zymogen; HET: QL2; 1.10A {Trypanosoma cruzi} PDB: 1ewm_A* 1ewo_A* 1ewl_A* 1f29_A* 1ewp_A* 1f2b_A* 1f2c_A* 1f2a_A* 1me4_A* 1u9q_X* 2aim_A* 2efm_A* 2oz2_A* 1me3_A* 3kku_A* 3lxs_A* 1aim_A* 3iut_A* 3hd3_A* 2p86_A* ... Length = 215 Back     alignment and structure
>2xu3_A Cathepsin L1; hydrolase, drug design, thiol protease; HET: XU3 BTB; 0.90A {Homo sapiens} PDB: 2xu4_A* 2xu5_A* 2yj2_A* 2yj8_A* 2yj9_A* 2yjb_A* 2yjc_A* 3bc3_A* 3h89_A* 3h8b_A* 3h8c_A* 3of9_A* 3of8_A* 3hha_A* 2xu1_A* 3iv2_A* 3k24_A* 2nqd_B* 3kse_A* 2vhs_A ... Length = 220 Back     alignment and structure
>2oul_A Falcipain 2; cysteine protease, inhibitor, macromolecular interaction, HY hydrolase inhibitor complex; 2.20A {Plasmodium falciparum} SCOP: d.3.1.1 PDB: 2ghu_A 1yvb_A 3bpf_A* 3pnr_A Length = 241 Back     alignment and structure
>3bwk_A Cysteine protease falcipain-3; malaria, hydrolase; HET: C1P; 2.42A {Plasmodium falciparum} PDB: 3bpm_A* Length = 243 Back     alignment and structure
>3ovx_A Cathepsin S; hydrolase, covalent inhibitor, aldehyde warhead is covalently bound to Cys25, lysosomeal protein; HET: O64; 1.49A {Homo sapiens} PDB: 2h7j_A* 2f1g_A* 2hh5_B* 2hhn_A* 2hxz_A* 2op3_A* 2frq_A* 2fra_A* 2fq9_A* 2ft2_A* 2fud_A* 2g7y_A* 1ms6_A* 2r9m_A* 2r9n_A* 2r9o_A* 3n3g_A* 3n4c_A* 3mpe_A* 1nqc_A* ... Length = 218 Back     alignment and structure
>1cqd_A Protein (protease II); cysteine protease, glycoprotein, proline specificity, carboh papain family, hydrolase; HET: NAG FUL FUC; 2.10A {Zingiber officinale} SCOP: d.3.1.1 Length = 221 Back     alignment and structure
>8pch_A Cathepsin H; hydrolase, protease, cysteine proteinase, aminopeptidase; HET: NAG BMA; 2.10A {Sus scrofa} SCOP: d.3.1.1 PDB: 1nb3_A* 1nb5_A* Length = 220 Back     alignment and structure
>3f75_A Toxopain-2, cathepsin L protease; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} Length = 224 Back     alignment and structure
>1o0e_A Ervatamin C; plant cysteine protease, two domain, stable at PH 2-12, HYDR; 1.90A {Tabernaemontana divaricata} SCOP: d.3.1.1 PDB: 2pns_A* 2pre_A* 3bcn_A* Length = 208 Back     alignment and structure
>3pdf_A Cathepsin C, dipeptidyl peptidase 1; two domains, cystein protease, hydrolase-hydrolase inhibitor; HET: LXV NAG; 1.85A {Homo sapiens} PDB: 1jqp_A* 2djf_B* 1k3b_B* 2djg_B* 2djf_A* 1k3b_A* 2djg_A* 2djf_C* 1k3b_C* 2djg_C* Length = 441 Back     alignment and structure
>2b1m_A SPE31; papain-like, sugar binding protein; HET: NAG FUC PG4; 2.00A {Pachyrhizus erosus} PDB: 2b1n_A* Length = 246 Back     alignment and structure
>3kwz_A Cathepsin K; enzyme inhibitor, covalent reversible inhibitor, disease mutation, disulfide bond, glycoprotein, hydrolase, lysosome, protease; HET: KWZ; 1.49A {Homo sapiens} PDB: 1au0_A* 1au2_A* 1au3_A* 1au4_A* 1ayu_A* 1ayv_A* 1ayw_A* 1bgo_A* 1atk_A* 1nl6_A* 1nlj_A* 1q6k_A* 1mem_A* 1yk7_A* 1yk8_A* 1yt7_A* 2ato_A* 2aux_A* 2auz_A* 2bdl_A* ... Length = 215 Back     alignment and structure
>1s4v_A Cysteine endopeptidase; KDEL ER retention signal, endosperm, ricinosomes, SEED germi senescence, hydrolase-hydrolase inhibitor complex; 2.00A {Ricinus communis} SCOP: d.3.1.1 Length = 229 Back     alignment and structure
>2fo5_A Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cysteine endoprotease, endopeptidase, LEUP hydrolase; HET: AR7; 2.20A {Hordeum vulgare} Length = 262 Back     alignment and structure
>1iwd_A Ervatamin B; cysteine protease, alpha-beta protein, catalytic DYAD, L-DOM domain., hydrolase; 1.63A {Tabernaemontana divaricata} SCOP: d.3.1.1 Length = 215 Back     alignment and structure
>3ioq_A CMS1MS2; caricaceae, cysteine protease, papain family, hydrolase; HET: E64 SO4; 1.87A {Carica candamarcensis} Length = 213 Back     alignment and structure
>2cio_A Papain; hydrolase/inhibitor, complex hydrolase/inhibitor, ICP, cysteine protease, allergen, protease, thiol protease; 1.5A {Carica papaya} PDB: 1khq_A 1khp_A 1ppn_A 3e1z_B 3ima_A 3lfy_A 9pap_A 1bqi_A* 1bp4_A* 1pad_A 1pe6_A* 1pip_A* 1pop_A* 1ppd_A 1ppp_A* 1stf_E* 2pad_A 4pad_A* 5pad_A* 6pad_A* ... Length = 212 Back     alignment and structure
>2bdz_A Mexicain; cysteine protease, peptidase_C1, papain-like, HYDR; HET: E64; 2.10A {Jacaratia mexicana} Length = 214 Back     alignment and structure
>1ppo_A Protease omega; hydrolase(thiol protease); 1.80A {Carica papaya} SCOP: d.3.1.1 PDB: 1meg_A* Length = 216 Back     alignment and structure
>1yal_A Chymopapain; hydrolase, thiol protease; 1.70A {Carica papaya} SCOP: d.3.1.1 PDB: 1gec_E* Length = 218 Back     alignment and structure
>2wbf_X Serine-repeat antigen protein; SERA, malaria, vacuole, protease, cathepsin, hydrolase, glycoprotein, thiol protease; HET: DMS; 1.60A {Plasmodium falciparum} PDB: 3ch3_X 3ch2_X Length = 265 Back     alignment and structure
>3u8e_A Papain-like cysteine protease; papain-like cysteine peptidase, peptidase_C1A, hydrolase, in form; 1.31A {Crocus sativus} Length = 222 Back     alignment and structure
>3hhi_A Cathepsin B-like cysteine protease; occluding loop, hydrolase, THIO protease; HET: 074; 1.60A {Trypanosoma brucei} PDB: 3mor_A* Length = 325 Back     alignment and structure
>1deu_A Procathepsin X; cysteine protease, proregion, prosegment, HY; 1.70A {Homo sapiens} SCOP: d.3.1.1 PDB: 1ef7_A Length = 277 Back     alignment and structure
>3pbh_A Procathepsin B; thiol protease, cysteine protease, proenzyme, papain; 2.50A {Homo sapiens} SCOP: d.3.1.1 PDB: 2pbh_A 1pbh_A 1mir_A Length = 317 Back     alignment and structure
>3qsd_A Cathepsin B-like peptidase (C01 family); cysteine peptidase, digestive tract, hydrolase-hydrolase INH complex; HET: 074; 1.30A {Schistosoma mansoni} PDB: 3s3q_A* 3s3r_A* Length = 254 Back     alignment and structure
>3ois_A Cysteine protease; alpha and beta, hydrolase; HET: UDP; 1.65A {Xylella fastidiosa} Length = 291 Back     alignment and structure
>3cbj_A Cathepsin B; cathepsin B, occluding loop, chagas disease, glyco hydrolase, lysosome, protease, thiol protease, zymogen, CYT vesicle; 1.80A {Homo sapiens} PDB: 3cbk_A 1gmy_A* 3ai8_B* 3k9m_A 1the_A* 1cpj_A* 1cte_A 2dcc_A* 2dc6_A* 1ito_A* 2dc8_A* 2dc9_A* 2dca_A* 2dcb_A* 2dc7_A* 2dcd_A* 1qdq_A* 1csb_B* 1huc_B 2ipp_B ... Length = 266 Back     alignment and structure
>3f75_P Toxopain-2, cathepsin L propeptide; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} Length = 106 Back     alignment and structure
>2l95_A Crammer, LP06209P; cysteine proteinase inhibitor, intrinsic disorder P like protein, hydrolase; NMR {Drosophila melanogaster} Length = 80 Back     alignment and structure
>3pw3_A Aminopeptidase C; bleomycin, cysteine proteinase fold, structural genomics, JO center for structural genomics, JCSG; HET: MSE; 2.23A {Parabacteroides distasonis} Length = 383 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query300
3qj3_A331 Cathepsin L-like protein; hydrolase, proteinase, l 100.0
3tnx_A363 Papain; hydrolase, cytoplasm for recombinant expre 100.0
3qt4_A329 Cathepsin-L-like midgut cysteine proteinase; hydro 100.0
1by8_A314 Protein (procathepsin K); hydrolase(sulfhydryl pro 100.0
1cs8_A316 Human procathepsin L; prosegment, propeptide, inhi 100.0
2c0y_A315 Procathepsin S; proenzyme, proteinase, hydrolase, 100.0
2o6x_A310 Procathepsin L1, secreted cathepsin L 1; hydrolase 100.0
1pci_A322 Procaricain; zymogen, hydrolase, thiol protease; 3 100.0
1xkg_A312 DER P I, major mite fecal allergen DER P 1; major 100.0
3pdf_A441 Cathepsin C, dipeptidyl peptidase 1; two domains, 100.0
3hhi_A325 Cathepsin B-like cysteine protease; occluding loop 100.0
3pbh_A317 Procathepsin B; thiol protease, cysteine protease, 100.0
3i06_A215 Cruzipain; autocatalytic cleavage, glycoprotein, p 100.0
2xu3_A220 Cathepsin L1; hydrolase, drug design, thiol protea 100.0
3kwz_A215 Cathepsin K; enzyme inhibitor, covalent reversible 100.0
1m6d_A214 Cathepsin F, catsf; papain family cysteine proteas 100.0
1cqd_A221 Protein (protease II); cysteine protease, glycopro 100.0
2b1m_A246 SPE31; papain-like, sugar binding protein; HET: NA 100.0
3ovx_A218 Cathepsin S; hydrolase, covalent inhibitor, aldehy 100.0
8pch_A220 Cathepsin H; hydrolase, protease, cysteine protein 100.0
1o0e_A208 Ervatamin C; plant cysteine protease, two domain, 100.0
2cio_A212 Papain; hydrolase/inhibitor, complex hydrolase/inh 100.0
1iwd_A215 Ervatamin B; cysteine protease, alpha-beta protein 100.0
2bdz_A214 Mexicain; cysteine protease, peptidase_C1, papain- 100.0
3ioq_A213 CMS1MS2; caricaceae, cysteine protease, papain fam 100.0
3u8e_A222 Papain-like cysteine protease; papain-like cystein 100.0
1ppo_A216 Protease omega; hydrolase(thiol protease); 1.80A { 100.0
3p5u_A220 Actinidin; SAD, cysteine proteinases, hydrolase; 1 100.0
2oul_A241 Falcipain 2; cysteine protease, inhibitor, macromo 100.0
2fo5_A262 Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cyst 100.0
1yal_A218 Chymopapain; hydrolase, thiol protease; 1.70A {Car 100.0
1s4v_A229 Cysteine endopeptidase; KDEL ER retention signal, 100.0
3bwk_A243 Cysteine protease falcipain-3; malaria, hydrolase; 100.0
3f75_A224 Toxopain-2, cathepsin L protease; medical structur 100.0
3f5v_A222 DER P 1 allergen; allergy, asthma, DUST mites, gly 100.0
3qsd_A254 Cathepsin B-like peptidase (C01 family); cysteine 100.0
3cbj_A266 Cathepsin B; cathepsin B, occluding loop, chagas d 100.0
1deu_A277 Procathepsin X; cysteine protease, proregion, pros 100.0
3ois_A291 Cysteine protease; alpha and beta, hydrolase; HET: 100.0
2wbf_X265 Serine-repeat antigen protein; SERA, malaria, vacu 100.0
2cb5_A 453 Protein (bleomycin hydrolase); aminopeptidase, cys 99.94
2e01_A 457 Cysteine proteinase 1; bleomycin hydrolase, thiol 99.93
3pw3_A 383 Aminopeptidase C; bleomycin, cysteine proteinase f 99.84
3f75_P106 Toxopain-2, cathepsin L propeptide; medical struct 99.76
2l95_A80 Crammer, LP06209P; cysteine proteinase inhibitor, 99.72
>3qj3_A Cathepsin L-like protein; hydrolase, proteinase, larVal midgut; 1.85A {Tenebrio molitor} SCOP: d.3.1.0 Back     alignment and structure
Probab=100.00  E-value=1.8e-63  Score=454.53  Aligned_cols=242  Identities=33%  Similarity=0.623  Sum_probs=213.6

Q ss_pred             cHHHHHHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHhcCC----CCCeeeeeccCCCCChhhHHhhhcCCCccCCCC
Q 022276           48 NAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLL----DPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLP  123 (300)
Q Consensus        48 ~~~~~F~~f~~~~~k~Y~s~~E~~~r~~~F~~n~~~I~~~N~~----~~s~~~giN~FsDlt~~Ef~~~~~g~~~~~~~~  123 (300)
                      ..+.+|++|+++|+|.|.+.+|+.+|+.+|++|+++|++||++    +.+|++|+|+|+|||.+||++.+++...+....
T Consensus        17 ~l~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~N~~~I~~hN~~~~~g~~sy~lg~N~FaDlt~eEf~~~~~~~~~~~~~~   96 (331)
T 3qj3_A           17 FVAEKWENFKTTYARSYVNAKEETFRKQIFQKKLETFEEHNEKYRQGLVSYTLGVNLFTDMTPEEMKAYTHGLIMPADLH   96 (331)
T ss_dssp             HHHHHHHHHHHHTTCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCSEEECCSTTTTCCHHHHHHHHSCCCCCSSTT
T ss_pred             HHHHHHHHHHHHhCCcCCCHHHHHHHHHHHHHHHHHHHHHHhhhccCCCceeecccccccCCHHHHHHHhcccccccccc
Confidence            3567899999999999999899999999999999999999975    679999999999999999999988765431111


Q ss_pred             CCCC--CCC----CCCCCCCCCceecCCCCCccccccCCCCcchHHHHHHHHHHHHHHHhcCC--CccCChhHHHhhCCC
Q 022276          124 ADAQ--KAP----ILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGE--LVSLSEQQLVDCDHE  195 (300)
Q Consensus       124 ~~~~--~~~----~~~~~~lP~s~DwR~~g~v~pvknQg~CgsCwAfa~~~~~e~~~~i~~~~--~~~lS~Q~lidC~~~  195 (300)
                      ....  ..+    .....++|++||||++|+|+||||||.||||||||++++||+++++++|+  .+.||+|+|+||+..
T Consensus        97 ~~~~~~~~~~~~~~~~~~~lP~s~DwR~~g~vtpVkdQg~CGSCWAFaa~~alE~~~~i~~g~~~~~~LSeQ~LvdC~~~  176 (331)
T 3qj3_A           97 KNGIPIKTREDLGLNASVRYPASFDWRDQGMVSPVKNQGSCGSSWAFSSTGAIESQMKIANGAGYDSSVSEQQLVDCVPN  176 (331)
T ss_dssp             TTCEEECSGGGGTCCSSCCCCSSEEGGGGTCSCCCCBCCSSCCHHHHHHHHHHHHHHHHHHCTTSCCCBCHHHHHHHCTT
T ss_pred             ccCcccccccccccccccCCCcceecccCCccCCCccCcccchhhHHHHHHHHHHHHHHHhCCCcccCcCHHHHhhhccC
Confidence            0000  000    00224799999999999999999999999999999999999999999998  899999999999974


Q ss_pred             CCCCCCCCCCCCCCCCChHHHHHHHHHhCCcCCCcccccCCCCCCCCCCCCCCceEEEceeEEcCh-hHHHHHHHHHhcC
Q 022276          196 CDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISS-DEDQMAANLVKHG  274 (300)
Q Consensus       196 ~~~~~~~~~~~gC~GG~~~~a~~y~~~~~G~~~e~~yPY~~~~~~~C~~~~~~~~~~i~~~~~v~~-~~~~i~~al~~~G  274 (300)
                               +.||+||++..||+|+++++|+++|++|||.+.+ +.|........++|.+|..++. ++++|+++|+++|
T Consensus       177 ---------~~GC~GG~~~~a~~yi~~~~Gi~~e~~yPY~~~~-~~C~~~~~~~~~~i~~~~~v~~~~e~~lk~al~~~G  246 (331)
T 3qj3_A          177 ---------ALGCSGGWMNDAFTYVAQNGGIDSEGAYPYEMAD-GNCHYDPNQVAARLSGYVYLSGPDENMLADMVATKG  246 (331)
T ss_dssp             ---------SCGGGCCCHHHHHHHHHHHTCEEBTTTSCCCSSC-CCCCCCTTSEEECCSEEEEESSCCHHHHHHHHHHHC
T ss_pred             ---------CCCCCCCCHHHHHHHHHHcCCcCcccccCccCCC-CCCCCCcccceeEeeEEEEeCCCCHHHHHHHHHhCC
Confidence                     8899999999999999999899999999999988 8999888888889999999986 8999999999999


Q ss_pred             CeEEEEecCC-CCCccCeeEecCCCC
Q 022276          275 PLAGNVASIE-LPHISFSFLFTVSSP  299 (300)
Q Consensus       275 Pv~v~i~a~~-f~~Y~~Giy~~~~~~  299 (300)
                      ||+|+|++.. |++|++|||..+.|.
T Consensus       247 PV~v~i~a~~~f~~Y~~Gvy~~~~c~  272 (331)
T 3qj3_A          247 PVAVAFDADDPFGSYSGGVYYNPTCE  272 (331)
T ss_dssp             CEEEEECCCTTGGGEEEEEECCTTCC
T ss_pred             CEEEEEEcccccccccCceEeCCCCC
Confidence            9999999976 999999999987663



>3tnx_A Papain; hydrolase, cytoplasm for recombinant expression; 2.62A {Carica papaya} Back     alignment and structure
>3qt4_A Cathepsin-L-like midgut cysteine proteinase; hydrolase, zymogen, intramolecular DISS bonds, insect larVal midgut; HET: PG4 PG6; 2.11A {Tenebrio molitor} Back     alignment and structure
>1by8_A Protein (procathepsin K); hydrolase(sulfhydryl proteinase), papain; 2.60A {Homo sapiens} SCOP: d.3.1.1 PDB: 7pck_A Back     alignment and structure
>1cs8_A Human procathepsin L; prosegment, propeptide, inhibition, hydrolase; HET: OCS; 1.80A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cjl_A 3hwn_A* Back     alignment and structure
>2c0y_A Procathepsin S; proenzyme, proteinase, hydrolase, thiol protease, prosegment binding loop, glycoprotein, lysosome, protease, zymogen; 2.1A {Homo sapiens} Back     alignment and structure
>2o6x_A Procathepsin L1, secreted cathepsin L 1; hydrolase, thiol protease, cysteine protease, zymogen, hydro; 1.40A {Fasciola hepatica} Back     alignment and structure
>1pci_A Procaricain; zymogen, hydrolase, thiol protease; 3.20A {Carica papaya} SCOP: d.3.1.1 Back     alignment and structure
>1xkg_A DER P I, major mite fecal allergen DER P 1; major allergen, cysteine protease, house DUST mite, dermatop pteronyssinus; 1.61A {Dermatophagoides pteronyssinus} SCOP: d.3.1.1 Back     alignment and structure
>3pdf_A Cathepsin C, dipeptidyl peptidase 1; two domains, cystein protease, hydrolase-hydrolase inhibitor; HET: LXV NAG; 1.85A {Homo sapiens} PDB: 1jqp_A* 2djf_B* 1k3b_B* 2djg_B* 2djf_A* 1k3b_A* 2djg_A* 2djf_C* 1k3b_C* 2djg_C* Back     alignment and structure
>3hhi_A Cathepsin B-like cysteine protease; occluding loop, hydrolase, THIO protease; HET: 074; 1.60A {Trypanosoma brucei} SCOP: d.3.1.0 PDB: 4hwy_A* 3mor_A* Back     alignment and structure
>3pbh_A Procathepsin B; thiol protease, cysteine protease, proenzyme, papain; 2.50A {Homo sapiens} SCOP: d.3.1.1 PDB: 2pbh_A 1pbh_A 1mir_A Back     alignment and structure
>3i06_A Cruzipain; autocatalytic cleavage, glycoprotein, protease, thiol protease, zymogen; HET: QL2; 1.10A {Trypanosoma cruzi} SCOP: d.3.1.1 PDB: 1ewm_A* 1ewo_A* 1ewl_A* 1f29_A* 1ewp_A* 1f2b_A* 1f2c_A* 1f2a_A* 1me4_A* 1u9q_X* 2aim_A* 2efm_A* 2oz2_A* 1me3_A* 3kku_A* 3lxs_A* 1aim_A* 3iut_A* 3hd3_A* 2p86_A* ... Back     alignment and structure
>2xu3_A Cathepsin L1; hydrolase, drug design, thiol protease; HET: XU3 BTB; 0.90A {Homo sapiens} PDB: 2xu4_A* 2xu5_A* 2yj2_A* 2yj8_A* 2yj9_A* 2yjb_A* 2yjc_A* 3bc3_A* 3h89_A* 3h8b_A* 3h8c_A* 3of9_A* 3of8_A* 3hha_A* 2xu1_A* 3iv2_A* 3k24_A* 2nqd_B* 3kse_A* 2vhs_A ... Back     alignment and structure
>3kwz_A Cathepsin K; enzyme inhibitor, covalent reversible inhibitor, disease mutation, disulfide bond, glycoprotein, hydrolase, lysosome, protease; HET: KWZ; 1.49A {Homo sapiens} PDB: 1au0_A* 1au2_A* 1au3_A* 1au4_A* 1ayu_A* 1ayv_A* 1ayw_A* 1bgo_A* 1atk_A* 1nl6_A* 1nlj_A* 1q6k_A* 1mem_A* 1yk7_A* 1yk8_A* 1yt7_A* 2ato_A* 2aux_A* 2auz_A* 2bdl_A* ... Back     alignment and structure
>1m6d_A Cathepsin F, catsf; papain family cysteine protease, hydrolase; HET: MYP; 1.70A {Homo sapiens} SCOP: d.3.1.1 Back     alignment and structure
>1cqd_A Protein (protease II); cysteine protease, glycoprotein, proline specificity, carboh papain family, hydrolase; HET: NAG FUL FUC; 2.10A {Zingiber officinale} SCOP: d.3.1.1 Back     alignment and structure
>2b1m_A SPE31; papain-like, sugar binding protein; HET: NAG FUC PG4; 2.00A {Pachyrhizus erosus} PDB: 2b1n_A* Back     alignment and structure
>3ovx_A Cathepsin S; hydrolase, covalent inhibitor, aldehyde warhead is covalently bound to Cys25, lysosomeal protein; HET: O64; 1.49A {Homo sapiens} SCOP: d.3.1.1 PDB: 2h7j_A* 2f1g_A* 2hh5_B* 2hhn_A* 2hxz_A* 2op3_A* 2frq_A* 2fra_A* 2fq9_A* 2ft2_A* 2fud_A* 2g7y_A* 1ms6_A* 2r9m_A* 2r9n_A* 2r9o_A* 3n3g_A* 3n4c_A* 3mpe_A* 1nqc_A* ... Back     alignment and structure
>8pch_A Cathepsin H; hydrolase, protease, cysteine proteinase, aminopeptidase; HET: NAG BMA; 2.10A {Sus scrofa} SCOP: d.3.1.1 PDB: 1nb3_A* 1nb5_A* Back     alignment and structure
>1o0e_A Ervatamin C; plant cysteine protease, two domain, stable at PH 2-12, HYDR; 1.90A {Tabernaemontana divaricata} SCOP: d.3.1.1 PDB: 2pns_A* 2pre_A* 3bcn_A* Back     alignment and structure
>2cio_A Papain; hydrolase/inhibitor, complex hydrolase/inhibitor, ICP, cysteine protease, allergen, protease, thiol protease; 1.5A {Carica papaya} PDB: 1khq_A 1khp_A 1ppn_A 3e1z_B 3ima_A 3lfy_A 9pap_A 1bqi_A* 1bp4_A* 1pad_A 1pe6_A* 1pip_A* 1pop_A* 1ppd_A 1ppp_A* 1stf_E* 2pad_A 4pad_A* 5pad_A* 6pad_A* ... Back     alignment and structure
>1iwd_A Ervatamin B; cysteine protease, alpha-beta protein, catalytic DYAD, L-DOM domain., hydrolase; 1.63A {Tabernaemontana divaricata} SCOP: d.3.1.1 Back     alignment and structure
>2bdz_A Mexicain; cysteine protease, peptidase_C1, papain-like, HYDR; HET: E64; 2.10A {Jacaratia mexicana} Back     alignment and structure
>3ioq_A CMS1MS2; caricaceae, cysteine protease, papain family, hydrolase; HET: E64 SO4; 1.87A {Carica candamarcensis} SCOP: d.3.1.1 Back     alignment and structure
>3u8e_A Papain-like cysteine protease; papain-like cysteine peptidase, peptidase_C1A, hydrolase, in form; 1.31A {Crocus sativus} SCOP: d.3.1.0 Back     alignment and structure
>1ppo_A Protease omega; hydrolase(thiol protease); 1.80A {Carica papaya} SCOP: d.3.1.1 PDB: 1meg_A* Back     alignment and structure
>2oul_A Falcipain 2; cysteine protease, inhibitor, macromolecular interaction, HY hydrolase inhibitor complex; 2.20A {Plasmodium falciparum} SCOP: d.3.1.1 PDB: 2ghu_A 1yvb_A 3bpf_A* 3pnr_A Back     alignment and structure
>2fo5_A Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cysteine endoprotease, endopeptidase, LEUP hydrolase; HET: AR7; 2.20A {Hordeum vulgare} Back     alignment and structure
>1yal_A Chymopapain; hydrolase, thiol protease; 1.70A {Carica papaya} SCOP: d.3.1.1 PDB: 1gec_E* Back     alignment and structure
>1s4v_A Cysteine endopeptidase; KDEL ER retention signal, endosperm, ricinosomes, SEED germi senescence, hydrolase-hydrolase inhibitor complex; 2.00A {Ricinus communis} SCOP: d.3.1.1 Back     alignment and structure
>3bwk_A Cysteine protease falcipain-3; malaria, hydrolase; HET: C1P; 2.42A {Plasmodium falciparum} PDB: 3bpm_A* Back     alignment and structure
>3f75_A Toxopain-2, cathepsin L protease; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} SCOP: d.3.1.0 Back     alignment and structure
>3qsd_A Cathepsin B-like peptidase (C01 family); cysteine peptidase, digestive tract, hydrolase-hydrolase INH complex; HET: 074; 1.30A {Schistosoma mansoni} SCOP: d.3.1.0 PDB: 3s3q_A* 3s3r_A* Back     alignment and structure
>3cbj_A Cathepsin B; cathepsin B, occluding loop, chagas disease, glyco hydrolase, lysosome, protease, thiol protease, zymogen, CYT vesicle; 1.80A {Homo sapiens} PDB: 3cbk_A 1gmy_A* 3ai8_B* 3k9m_A 1the_A* 1cpj_A* 1cte_A 2dcc_A* 2dc6_A* 1ito_A* 2dc8_A* 2dc9_A* 2dca_A* 2dcb_A* 2dc7_A* 2dcd_A* 1qdq_A* 1csb_B* 1huc_B 2ipp_B ... Back     alignment and structure
>1deu_A Procathepsin X; cysteine protease, proregion, prosegment, HY; 1.70A {Homo sapiens} SCOP: d.3.1.1 PDB: 1ef7_A Back     alignment and structure
>3ois_A Cysteine protease; alpha and beta, hydrolase; HET: UDP; 1.65A {Xylella fastidiosa} Back     alignment and structure
>2wbf_X Serine-repeat antigen protein; SERA, malaria, vacuole, protease, cathepsin, hydrolase, glycoprotein, thiol protease; HET: DMS; 1.60A {Plasmodium falciparum} PDB: 3ch3_X 3ch2_X Back     alignment and structure
>2cb5_A Protein (bleomycin hydrolase); aminopeptidase, cysteine protease, SELF- compartmentalizing, cylinase; 1.85A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cb5_A Back     alignment and structure
>2e01_A Cysteine proteinase 1; bleomycin hydrolase, thiol protease, C1 protease, hydrolase; 1.73A {Saccharomyces cerevisiae} PDB: 2e02_A 2e03_A 2dzy_A 1a6r_A 2e00_A 2dzz_A 3gcb_A 1gcb_A Back     alignment and structure
>3pw3_A Aminopeptidase C; bleomycin, cysteine proteinase fold, structural genomics, JO center for structural genomics, JCSG; HET: MSE; 2.23A {Parabacteroides distasonis} Back     alignment and structure
>3f75_P Toxopain-2, cathepsin L propeptide; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} Back     alignment and structure
>2l95_A Crammer, LP06209P; cysteine proteinase inhibitor, intrinsic disorder P like protein, hydrolase; NMR {Drosophila melanogaster} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 300
d1cs8a_316 d.3.1.1 (A:) (Pro)cathepsin L {Human (Homo sapiens 7e-42
d1cqda_216 d.3.1.1 (A:) Proline-specific cysteine protease {G 1e-38
d1m6da_214 d.3.1.1 (A:) Cathepsin F {Human (Homo sapiens) [Ta 3e-37
d1xkga1302 d.3.1.1 (A:4-305) Major mite fecal allergen der p 3e-37
d1o0ea_208 d.3.1.1 (A:) Ervatamin C {East indian rosebay (Erv 7e-36
d2h7ja1217 d.3.1.1 (A:1-217) (Pro)cathepsin S {Human (Homo sa 1e-35
d1fh0a_221 d.3.1.1 (A:) (Pro)cathepsin V {Human (Homo sapiens 3e-35
d1aeca_218 d.3.1.1 (A:) Actinidin {Chinese gooseberry or kiwi 4e-35
d2r6na1215 d.3.1.1 (A:1-215) (Pro)cathepsin K {Human (Homo sa 4e-35
d1iwda_215 d.3.1.1 (A:) Ervatamin B {Adam's apple (Ervatamia 7e-35
d2oula1241 d.3.1.1 (A:-16-224) Falcipain 2 {Plasmodium falcip 9e-35
d1yala_218 d.3.1.1 (A:) Chymopapain {Papaya (Carica papaya) [ 2e-34
g8pch.1228 d.3.1.1 (P:,A:) Cathepsin H {Pig (Sus scrofa) [Tax 5e-34
d1s4va_224 d.3.1.1 (A:) Vignain (bean endopeptidase) {Castor 2e-33
d1khqa_212 d.3.1.1 (A:) Papain {Papaya (Carica papaya) [TaxId 1e-32
d1ppoa_216 d.3.1.1 (A:) Caricain (protease omega) {Papaya (Ca 1e-32
d1gmya_254 d.3.1.1 (A:) (Pro)cathepsin B {Human (Homo sapiens 1e-32
d1me4a_215 d.3.1.1 (A:) Cruzain {Trypanosoma cruzi [TaxId: 56 5e-30
g1k3b.1233 d.3.1.1 (B:,C:) Cathepsin C (dipeptidyl peptidase 1e-26
d1deua_275 d.3.1.1 (A:) (Pro)cathepsin X {Human (Homo sapiens 3e-24
d3gcba_ 458 d.3.1.1 (A:) Bleomycin hydrolase {Baker's yeast (S 8e-04
>d1cs8a_ d.3.1.1 (A:) (Pro)cathepsin L {Human (Homo sapiens) [TaxId: 9606]} Length = 316 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: Cysteine proteinases
superfamily: Cysteine proteinases
family: Papain-like
domain: (Pro)cathepsin L
species: Human (Homo sapiens) [TaxId: 9606]
 Score =  144 bits (364), Expect = 7e-42
 Identities = 82/231 (35%), Positives = 118/231 (51%), Gaps = 15/231 (6%)

Query: 50  EHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVH----GVTKFSDLT 105
           E  ++ +K+  ++ Y   EE  +R  V++ N++  +          H     +  F D+T
Sbjct: 9   EAQWTKWKAMHNRLYGMNEEG-WRRAVWEKNMKMIELHNQEYREGKHSFTMAMNAFGDMT 67

Query: 106 PSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFS 165
             EFR+   G   R        + P+    + P   DWR+ G VT VK+QG CGSCW+FS
Sbjct: 68  SEEFRQVMNGFQNRKPRKGKVFQEPL--FYEAPRSVDWREKGYVTPVKNQGQCGSCWAFS 125

Query: 166 ATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGG 225
           ATGALEG  F  TG L+SLSEQ LVDC            + GCNGGLM+ AF+Y+   GG
Sbjct: 126 ATGALEGQMFRKTGRLISLSEQNLVDCSGPQ-------GNEGCNGGLMDYAFQYVQDNGG 178

Query: 226 VEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPL 276
           ++ E+ YPY  T+  SCK++     A  + F  I   E  +   +   GP+
Sbjct: 179 LDSEESYPYEATE-ESCKYNPKYSVANDAGFVDIPKQEKALMKAVATVGPI 228


>d1cqda_ d.3.1.1 (A:) Proline-specific cysteine protease {Ginger rhizome (Zingiber officinale) [TaxId: 94328]} Length = 216 Back     information, alignment and structure
>d1m6da_ d.3.1.1 (A:) Cathepsin F {Human (Homo sapiens) [TaxId: 9606]} Length = 214 Back     information, alignment and structure
>d1xkga1 d.3.1.1 (A:4-305) Major mite fecal allergen der p 1 {House-dust mite (Dermatophagoides pteronyssinus) [TaxId: 6956]} Length = 302 Back     information, alignment and structure
>d1o0ea_ d.3.1.1 (A:) Ervatamin C {East indian rosebay (Ervatamia coronaria) [TaxId: 52861]} Length = 208 Back     information, alignment and structure
>d2h7ja1 d.3.1.1 (A:1-217) (Pro)cathepsin S {Human (Homo sapiens) [TaxId: 9606]} Length = 217 Back     information, alignment and structure
>d1fh0a_ d.3.1.1 (A:) (Pro)cathepsin V {Human (Homo sapiens) [TaxId: 9606]} Length = 221 Back     information, alignment and structure
>d1aeca_ d.3.1.1 (A:) Actinidin {Chinese gooseberry or kiwifruit (Actinidia chinensis) [TaxId: 3625]} Length = 218 Back     information, alignment and structure
>d2r6na1 d.3.1.1 (A:1-215) (Pro)cathepsin K {Human (Homo sapiens) [TaxId: 9606]} Length = 215 Back     information, alignment and structure
>d1iwda_ d.3.1.1 (A:) Ervatamin B {Adam's apple (Ervatamia coronaria) [TaxId: 52861]} Length = 215 Back     information, alignment and structure
>d2oula1 d.3.1.1 (A:-16-224) Falcipain 2 {Plasmodium falciparum [TaxId: 5833]} Length = 241 Back     information, alignment and structure
>d1yala_ d.3.1.1 (A:) Chymopapain {Papaya (Carica papaya) [TaxId: 3649]} Length = 218 Back     information, alignment and structure
>d1s4va_ d.3.1.1 (A:) Vignain (bean endopeptidase) {Castor bean (Ricinus communis) [TaxId: 3988]} Length = 224 Back     information, alignment and structure
>d1khqa_ d.3.1.1 (A:) Papain {Papaya (Carica papaya) [TaxId: 3649]} Length = 212 Back     information, alignment and structure
>d1ppoa_ d.3.1.1 (A:) Caricain (protease omega) {Papaya (Carica papaya) [TaxId: 3649]} Length = 216 Back     information, alignment and structure
>d1gmya_ d.3.1.1 (A:) (Pro)cathepsin B {Human (Homo sapiens) [TaxId: 9606]} Length = 254 Back     information, alignment and structure
>d1me4a_ d.3.1.1 (A:) Cruzain {Trypanosoma cruzi [TaxId: 5693]} Length = 215 Back     information, alignment and structure
>d1deua_ d.3.1.1 (A:) (Pro)cathepsin X {Human (Homo sapiens) [TaxId: 9606]} Length = 275 Back     information, alignment and structure
>d3gcba_ d.3.1.1 (A:) Bleomycin hydrolase {Baker's yeast (Saccharomyces cerevisiae), Gal6 [TaxId: 4932]} Length = 458 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query300
d1cs8a_316 (Pro)cathepsin L {Human (Homo sapiens) [TaxId: 960 100.0
d1xkga1302 Major mite fecal allergen der p 1 {House-dust mite 100.0
d2oula1241 Falcipain 2 {Plasmodium falciparum [TaxId: 5833]} 100.0
d1yala_218 Chymopapain {Papaya (Carica papaya) [TaxId: 3649]} 100.0
d1cqda_216 Proline-specific cysteine protease {Ginger rhizome 100.0
d1fh0a_221 (Pro)cathepsin V {Human (Homo sapiens) [TaxId: 960 100.0
d1ppoa_216 Caricain (protease omega) {Papaya (Carica papaya) 100.0
d2r6na1215 (Pro)cathepsin K {Human (Homo sapiens) [TaxId: 960 100.0
g8pch.1228 Cathepsin H {Pig (Sus scrofa) [TaxId: 9823]} 100.0
d1deua_275 (Pro)cathepsin X {Human (Homo sapiens) [TaxId: 960 100.0
d1m6da_214 Cathepsin F {Human (Homo sapiens) [TaxId: 9606]} 100.0
d2h7ja1217 (Pro)cathepsin S {Human (Homo sapiens) [TaxId: 960 100.0
d1khqa_212 Papain {Papaya (Carica papaya) [TaxId: 3649]} 100.0
g1k3b.1233 Cathepsin C (dipeptidyl peptidase I), catalytic do 100.0
d1o0ea_208 Ervatamin C {East indian rosebay (Ervatamia corona 100.0
d1me4a_215 Cruzain {Trypanosoma cruzi [TaxId: 5693]} 100.0
d1iwda_215 Ervatamin B {Adam's apple (Ervatamia coronaria) [T 100.0
d1aeca_218 Actinidin {Chinese gooseberry or kiwifruit (Actini 100.0
d1s4va_224 Vignain (bean endopeptidase) {Castor bean (Ricinus 100.0
d1gmya_254 (Pro)cathepsin B {Human (Homo sapiens) [TaxId: 960 99.97
d3gcba_ 458 Bleomycin hydrolase {Baker's yeast (Saccharomyces 98.03
d2cb5a_ 453 Bleomycin hydrolase {Human (Homo sapiens) [TaxId: 97.76
>d1cs8a_ d.3.1.1 (A:) (Pro)cathepsin L {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Cysteine proteinases
superfamily: Cysteine proteinases
family: Papain-like
domain: (Pro)cathepsin L
species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00  E-value=1.6e-56  Score=406.03  Aligned_cols=241  Identities=33%  Similarity=0.613  Sum_probs=208.4

Q ss_pred             cHHHHHHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHhcCC----CCCeeeeeccCCCCChhhHHhhhcCCCccCCCC
Q 022276           48 NAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLL----DPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLP  123 (300)
Q Consensus        48 ~~~~~F~~f~~~~~k~Y~s~~E~~~r~~~F~~n~~~I~~~N~~----~~s~~~giN~FsDlt~~Ef~~~~~g~~~~~~~~  123 (300)
                      ..+.+|++|+++|+|.|.+ +|+.+|+.+|++|++.|++||++    +.+|++|+|+|+|||.+||.+.+++........
T Consensus         7 ~l~~~F~~f~~~~~K~Y~~-~ee~~R~~iF~~N~~~I~~~N~~~~~~~~~~~~g~N~fsDlt~eEf~~~~~~~~~~~~~~   85 (316)
T d1cs8a_           7 SLEAQWTKWKAMHNRLYGM-NEEGWRRAVWEKNMKMIELHNQEYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQNRKPRK   85 (316)
T ss_dssp             GGHHHHHHHHHHTTCCCCT-THHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECCCTTTTCCHHHHHHHHCCBCCCCCSC
T ss_pred             HHHHHHHHHHHHhCCcCCC-HHHHHHHHHHHHHHHHHHHHHhHhhcCCCceEEeceeccccCcHHHHhhhcccccccccc
Confidence            4567899999999999977 56789999999999999999974    469999999999999999999888765432221


Q ss_pred             CCCCCCCCCCCCCCCCceecCCCCCccccccCCCCcchHHHHHHHHHHHHHHHhcCCCccCChhHHHhhCCCCCCCCCCC
Q 022276          124 ADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGS  203 (300)
Q Consensus       124 ~~~~~~~~~~~~~lP~s~DwR~~g~v~pvknQg~CgsCwAfa~~~~~e~~~~i~~~~~~~lS~Q~lidC~~~~~~~~~~~  203 (300)
                      ...  .......++|++||||++|+|+||||||.||||||||+++++|++++++++..+.||+|||+||+..       .
T Consensus        86 ~~~--~~~~~~~~lP~s~Dwr~~g~vtpVkdQG~CGsCwAfa~~~~~E~~~~i~~~~~~~lS~Q~lvdC~~~-------~  156 (316)
T d1cs8a_          86 GKV--FQEPLFYEAPRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGP-------Q  156 (316)
T ss_dssp             CEE--CCCCTTCCCCSCEEGGGGTCCCCCCBCCSSSCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCGG-------G
T ss_pred             Ccc--ccCcccccCCCceECCcCCcccccccCCCCceeeehhhhHHHHHHHHhhcCCcccchhhhhhhcccc-------c
Confidence            111  1122345899999999999999999999999999999999999999999999999999999999864       2


Q ss_pred             CCCCCCCCChHHHHHHHHHhCCcCCCcccccCCCCCCCCCCCCCCceEEEceeEEcChhHHHHHHHHHhcCCeEEEEecC
Q 022276          204 CDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAGNVASI  283 (300)
Q Consensus       204 ~~~gC~GG~~~~a~~y~~~~~G~~~e~~yPY~~~~~~~C~~~~~~~~~~i~~~~~v~~~~~~i~~al~~~GPv~v~i~a~  283 (300)
                      ++.||.||.+..||.|++.+|++..|.+|||.+.. ..|..........+..+.....+++.|+++|+.+|||+|+|++.
T Consensus       157 ~~~~c~gg~~~~a~~y~~~~g~~~~e~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gpv~v~i~~~  235 (316)
T d1cs8a_         157 GNEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATE-ESCKYNPKYSVANDAGFVDIPKQEKALMKAVATVGPISVAIDAG  235 (316)
T ss_dssp             TCCGGGCBCHHHHHHHHHHHTCEEBTTTSCCCSSC-CCCCCCGGGEEECCCCEEECCSCHHHHHHHHHHHCCEEEEECCC
T ss_pred             cCCCCCCCchHHHHHHHHhcCcccccccccccccc-cccccccccccccccccccccCcHHHHHHHHHHhCCeEEEEEec
Confidence            47899999999999999999888999999999988 78877666666777777777778999999999999999999986


Q ss_pred             C--CCCccCeeEecCCCC
Q 022276          284 E--LPHISFSFLFTVSSP  299 (300)
Q Consensus       284 ~--f~~Y~~Giy~~~~~~  299 (300)
                      .  |++|++|||..+.|+
T Consensus       236 ~~~f~~y~~Gi~~~~~c~  253 (316)
T d1cs8a_         236 HESFLFYKEGIYFEPDCS  253 (316)
T ss_dssp             SHHHHTEEEEEECCTTCC
T ss_pred             cchhccccCCcccCCCCC
Confidence            4  999999999988764



>d1xkga1 d.3.1.1 (A:4-305) Major mite fecal allergen der p 1 {House-dust mite (Dermatophagoides pteronyssinus) [TaxId: 6956]} Back     information, alignment and structure
>d1yala_ d.3.1.1 (A:) Chymopapain {Papaya (Carica papaya) [TaxId: 3649]} Back     information, alignment and structure
>d1cqda_ d.3.1.1 (A:) Proline-specific cysteine protease {Ginger rhizome (Zingiber officinale) [TaxId: 94328]} Back     information, alignment and structure
>d1fh0a_ d.3.1.1 (A:) (Pro)cathepsin V {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ppoa_ d.3.1.1 (A:) Caricain (protease omega) {Papaya (Carica papaya) [TaxId: 3649]} Back     information, alignment and structure
>d2r6na1 d.3.1.1 (A:1-215) (Pro)cathepsin K {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1deua_ d.3.1.1 (A:) (Pro)cathepsin X {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1m6da_ d.3.1.1 (A:) Cathepsin F {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2h7ja1 d.3.1.1 (A:1-217) (Pro)cathepsin S {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1khqa_ d.3.1.1 (A:) Papain {Papaya (Carica papaya) [TaxId: 3649]} Back     information, alignment and structure
>d1o0ea_ d.3.1.1 (A:) Ervatamin C {East indian rosebay (Ervatamia coronaria) [TaxId: 52861]} Back     information, alignment and structure
>d1me4a_ d.3.1.1 (A:) Cruzain {Trypanosoma cruzi [TaxId: 5693]} Back     information, alignment and structure
>d1iwda_ d.3.1.1 (A:) Ervatamin B {Adam's apple (Ervatamia coronaria) [TaxId: 52861]} Back     information, alignment and structure
>d1aeca_ d.3.1.1 (A:) Actinidin {Chinese gooseberry or kiwifruit (Actinidia chinensis) [TaxId: 3625]} Back     information, alignment and structure
>d1s4va_ d.3.1.1 (A:) Vignain (bean endopeptidase) {Castor bean (Ricinus communis) [TaxId: 3988]} Back     information, alignment and structure
>d1gmya_ d.3.1.1 (A:) (Pro)cathepsin B {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d3gcba_ d.3.1.1 (A:) Bleomycin hydrolase {Baker's yeast (Saccharomyces cerevisiae), Gal6 [TaxId: 4932]} Back     information, alignment and structure
>d2cb5a_ d.3.1.1 (A:) Bleomycin hydrolase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure